##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM3410552v1 #!genome-build-accession NCBI_Assembly:GCA_034105525.1 #!annotation-date 11/29/2023 23:27:17 #!annotation-source NCBI ##sequence-region JAXGFV010000001.1 1 197565 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000001.1 Genbank region 1 197565 . + . ID=JAXGFV010000001.1:1..197565;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000001.1 Genbank pseudogene 8 908 . + . ID=gene-SNF32_00005;Name=SNF32_00005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00005;pseudo=true JAXGFV010000001.1 Protein Homology CDS 8 908 . + 0 ID=cds-SNF32_00005;Parent=gene-SNF32_00005;Note=frameshifted;Ontology_term=GO:0030001,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010751922.1;locus_tag=SNF32_00005;product=magnesium transporter CorA family protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 973 1865 . + . ID=gene-SNF32_00010;Name=SNF32_00010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00010;pseudo=true JAXGFV010000001.1 Protein Homology CDS 973 1865 . + 0 ID=cds-SNF32_00010;Parent=gene-SNF32_00010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629387.1;locus_tag=SNF32_00010;product=SDR family oxidoreductase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 1896 2457 . + . ID=gene-SNF32_00015;Name=amaP;gbkey=Gene;gene=amaP;gene_biotype=pseudogene;locus_tag=SNF32_00015;pseudo=true JAXGFV010000001.1 Protein Homology CDS 1896 2457 . + 0 ID=cds-SNF32_00015;Parent=gene-SNF32_00015;Note=frameshifted;gbkey=CDS;gene=amaP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735368.1;locus_tag=SNF32_00015;product=alkaline shock response membrane anchor protein AmaP;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 2470 2657 . + . ID=gene-SNF32_00020;Name=SNF32_00020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00020;pseudo=true JAXGFV010000001.1 Protein Homology CDS 2470 2657 . + 0 ID=cds-SNF32_00020;Parent=gene-SNF32_00020;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875246.1;locus_tag=SNF32_00020;product=DUF2273 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 2669 3438 . + . ID=gene-SNF32_00025;Name=SNF32_00025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00025;pseudo=true JAXGFV010000001.1 Protein Homology CDS 2669 3438 . + 0 ID=cds-SNF32_00025;Parent=gene-SNF32_00025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002342606.1;locus_tag=SNF32_00025;product=Asp23/Gls24 family envelope stress response protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 3524 3766 . + . ID=gene-SNF32_00030;Name=SNF32_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00030 JAXGFV010000001.1 Protein Homology CDS 3524 3766 . + 0 ID=cds-MDY4306454.1;Parent=gene-SNF32_00030;Dbxref=NCBI_GP:MDY4306454.1;Name=MDY4306454.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723801.1;locus_tag=SNF32_00030;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=MDY4306454.1;transl_table=11 JAXGFV010000001.1 Genbank gene 4242 4415 . + . ID=gene-SNF32_00035;Name=SNF32_00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00035 JAXGFV010000001.1 GeneMarkS-2+ CDS 4242 4415 . + 0 ID=cds-MDY4306455.1;Parent=gene-SNF32_00035;Dbxref=NCBI_GP:MDY4306455.1;Name=MDY4306455.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00035;product=hypothetical protein;protein_id=MDY4306455.1;transl_table=11 JAXGFV010000001.1 Genbank gene 4633 6345 . + . ID=gene-SNF32_00040;Name=SNF32_00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00040 JAXGFV010000001.1 GeneMarkS-2+ CDS 4633 6345 . + 0 ID=cds-MDY4306456.1;Parent=gene-SNF32_00040;Dbxref=NCBI_GP:MDY4306456.1;Name=MDY4306456.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00040;product=hypothetical protein;protein_id=MDY4306456.1;transl_table=11 JAXGFV010000001.1 Genbank gene 6294 9458 . + . ID=gene-SNF32_00045;Name=SNF32_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00045 JAXGFV010000001.1 Protein Homology CDS 6294 9458 . + 0 ID=cds-MDY4306457.1;Parent=gene-SNF32_00045;Dbxref=NCBI_GP:MDY4306457.1;Name=MDY4306457.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015244.3;locus_tag=SNF32_00045;product=putative mucin/carbohydrate-binding domain-containing protein;protein_id=MDY4306457.1;transl_table=11 JAXGFV010000001.1 Genbank gene 9562 10089 . + . ID=gene-SNF32_00050;Name=SNF32_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00050 JAXGFV010000001.1 Protein Homology CDS 9562 10089 . + 0 ID=cds-MDY4306458.1;Parent=gene-SNF32_00050;Dbxref=NCBI_GP:MDY4306458.1;Name=MDY4306458.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016901.3;locus_tag=SNF32_00050;product=helix-turn-helix domain-containing protein;protein_id=MDY4306458.1;transl_table=11 JAXGFV010000001.1 Genbank gene 10687 10998 . + . ID=gene-SNF32_00055;Name=SNF32_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00055 JAXGFV010000001.1 GeneMarkS-2+ CDS 10687 10998 . + 0 ID=cds-MDY4306459.1;Parent=gene-SNF32_00055;Dbxref=NCBI_GP:MDY4306459.1;Name=MDY4306459.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00055;product=hypothetical protein;protein_id=MDY4306459.1;transl_table=11 JAXGFV010000001.1 Genbank gene 11071 11286 . - . ID=gene-SNF32_00060;Name=SNF32_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00060 JAXGFV010000001.1 Protein Homology CDS 11071 11286 . - 0 ID=cds-MDY4306460.1;Parent=gene-SNF32_00060;Dbxref=NCBI_GP:MDY4306460.1;Name=MDY4306460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723937.1;locus_tag=SNF32_00060;product=helix-turn-helix transcriptional regulator;protein_id=MDY4306460.1;transl_table=11 JAXGFV010000001.1 Genbank gene 11295 11768 . - . ID=gene-SNF32_00065;Name=SNF32_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00065 JAXGFV010000001.1 Protein Homology CDS 11295 11768 . - 0 ID=cds-MDY4306461.1;Parent=gene-SNF32_00065;Dbxref=NCBI_GP:MDY4306461.1;Name=MDY4306461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723938.1;locus_tag=SNF32_00065;product=DUF2975 domain-containing protein;protein_id=MDY4306461.1;transl_table=11 JAXGFV010000001.1 Genbank gene 12352 12507 . + . ID=gene-SNF32_00070;Name=SNF32_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00070 JAXGFV010000001.1 GeneMarkS-2+ CDS 12352 12507 . + 0 ID=cds-MDY4306462.1;Parent=gene-SNF32_00070;Dbxref=NCBI_GP:MDY4306462.1;Name=MDY4306462.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00070;product=hypothetical protein;protein_id=MDY4306462.1;transl_table=11 JAXGFV010000001.1 Genbank gene 13072 13629 . + . ID=gene-SNF32_00075;Name=SNF32_00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00075 JAXGFV010000001.1 Protein Homology CDS 13072 13629 . + 0 ID=cds-MDY4306463.1;Parent=gene-SNF32_00075;Dbxref=NCBI_GP:MDY4306463.1;Name=MDY4306463.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025854.3;locus_tag=SNF32_00075;product=GHKL domain-containing protein;protein_id=MDY4306463.1;transl_table=11 JAXGFV010000001.1 Genbank gene 13632 13808 . + . ID=gene-SNF32_00080;Name=SNF32_00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00080 JAXGFV010000001.1 GeneMarkS-2+ CDS 13632 13808 . + 0 ID=cds-MDY4306464.1;Parent=gene-SNF32_00080;Dbxref=NCBI_GP:MDY4306464.1;Name=MDY4306464.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00080;product=hypothetical protein;protein_id=MDY4306464.1;transl_table=11 JAXGFV010000001.1 Genbank gene 13838 14029 . + . ID=gene-SNF32_00085;Name=SNF32_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00085 JAXGFV010000001.1 Protein Homology CDS 13838 14029 . + 0 ID=cds-MDY4306465.1;Parent=gene-SNF32_00085;Dbxref=NCBI_GP:MDY4306465.1;Name=MDY4306465.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012301.3;locus_tag=SNF32_00085;product=hypothetical protein;protein_id=MDY4306465.1;transl_table=11 JAXGFV010000001.1 Genbank gene 14139 14288 . + . ID=gene-SNF32_00090;Name=SNF32_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00090 JAXGFV010000001.1 Protein Homology CDS 14139 14288 . + 0 ID=cds-MDY4306466.1;Parent=gene-SNF32_00090;Dbxref=NCBI_GP:MDY4306466.1;Name=MDY4306466.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF016296.3;locus_tag=SNF32_00090;product=LytTR family transcriptional regulator DNA-binding domain-containing protein;protein_id=MDY4306466.1;transl_table=11 JAXGFV010000001.1 Genbank gene 14481 15047 . + . ID=gene-SNF32_00095;Name=SNF32_00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00095 JAXGFV010000001.1 Protein Homology CDS 14481 15047 . + 0 ID=cds-MDY4306467.1;Parent=gene-SNF32_00095;Dbxref=NCBI_GP:MDY4306467.1;Name=MDY4306467.1;Ontology_term=GO:0009372,GO:0008233,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptidase activity|0008233||IEA;go_process=quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735381.1;locus_tag=SNF32_00095;product=accessory gene regulator B family protein;protein_id=MDY4306467.1;transl_table=11 JAXGFV010000001.1 Genbank gene 15050 15205 . + . ID=gene-SNF32_00100;Name=SNF32_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00100 JAXGFV010000001.1 Protein Homology CDS 15050 15205 . + 0 ID=cds-MDY4306468.1;Parent=gene-SNF32_00100;Dbxref=NCBI_GP:MDY4306468.1;Name=MDY4306468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735382.1;locus_tag=SNF32_00100;product=cyclic lactone autoinducer peptide;protein_id=MDY4306468.1;transl_table=11 JAXGFV010000001.1 Genbank gene 15899 16465 . + . ID=gene-SNF32_00105;Name=amaP;gbkey=Gene;gene=amaP;gene_biotype=protein_coding;locus_tag=SNF32_00105 JAXGFV010000001.1 Protein Homology CDS 15899 16465 . + 0 ID=cds-MDY4306469.1;Parent=gene-SNF32_00105;Dbxref=NCBI_GP:MDY4306469.1;Name=MDY4306469.1;gbkey=CDS;gene=amaP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002297459.1;locus_tag=SNF32_00105;product=alkaline shock response membrane anchor protein AmaP;protein_id=MDY4306469.1;transl_table=11 JAXGFV010000001.1 Genbank gene 16486 16665 . + . ID=gene-SNF32_00110;Name=SNF32_00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00110 JAXGFV010000001.1 Protein Homology CDS 16486 16665 . + 0 ID=cds-MDY4306470.1;Parent=gene-SNF32_00110;Dbxref=NCBI_GP:MDY4306470.1;Name=MDY4306470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875246.1;locus_tag=SNF32_00110;product=DUF2273 domain-containing protein;protein_id=MDY4306470.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 16678 17230 . + . ID=gene-SNF32_00115;Name=SNF32_00115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00115;pseudo=true JAXGFV010000001.1 Protein Homology CDS 16678 17230 . + 0 ID=cds-SNF32_00115;Parent=gene-SNF32_00115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002295944.1;locus_tag=SNF32_00115;product=Asp23/Gls24 family envelope stress response protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 17265 17507 . + . ID=gene-SNF32_00120;Name=SNF32_00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00120 JAXGFV010000001.1 Protein Homology CDS 17265 17507 . + 0 ID=cds-MDY4306471.1;Parent=gene-SNF32_00120;Dbxref=NCBI_GP:MDY4306471.1;Name=MDY4306471.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723801.1;locus_tag=SNF32_00120;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=MDY4306471.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 18057 19125 . + . ID=gene-SNF32_00125;Name=SNF32_00125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00125;pseudo=true JAXGFV010000001.1 Protein Homology CDS 18057 19125 . + 0 ID=cds-SNF32_00125;Parent=gene-SNF32_00125;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005472755.1;locus_tag=SNF32_00125;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 19125 20004 . + . ID=gene-SNF32_00130;Name=SNF32_00130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00130;pseudo=true JAXGFV010000001.1 Protein Homology CDS 19125 20004 . + 0 ID=cds-SNF32_00130;Parent=gene-SNF32_00130;Note=frameshifted%3B internal stop;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724472.1;locus_tag=SNF32_00130;product=sugar ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 20009 20852 . + . ID=gene-SNF32_00135;Name=SNF32_00135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00135;pseudo=true JAXGFV010000001.1 Protein Homology CDS 20009 20852 . + 0 ID=cds-SNF32_00135;Parent=gene-SNF32_00135;Note=frameshifted;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002424970.1;locus_tag=SNF32_00135;product=carbohydrate ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 20849 22076 . + . ID=gene-SNF32_00140;Name=SNF32_00140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00140;pseudo=true JAXGFV010000001.1 Protein Homology CDS 20849 22076 . + 0 ID=cds-SNF32_00140;Parent=gene-SNF32_00140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002355145.1;locus_tag=SNF32_00140;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 22094 23375 . + . ID=gene-SNF32_00145;Name=SNF32_00145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00145;pseudo=true JAXGFV010000001.1 Protein Homology CDS 22094 23375 . + 0 ID=cds-SNF32_00145;Parent=gene-SNF32_00145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005228017.1;locus_tag=SNF32_00145;product=extracellular solute-binding protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 23398 24950 . + . ID=gene-SNF32_00150;Name=SNF32_00150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00150;pseudo=true JAXGFV010000001.1 Protein Homology CDS 23398 24950 . + 0 ID=cds-SNF32_00150;Parent=gene-SNF32_00150;Note=frameshifted;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735393.1;locus_tag=SNF32_00150;product=bifunctional metallophosphatase/5'-nucleotidase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 25024 25791 . - . ID=gene-SNF32_00155;Name=SNF32_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00155 JAXGFV010000001.1 Protein Homology CDS 25024 25791 . - 0 ID=cds-MDY4306472.1;Parent=gene-SNF32_00155;Dbxref=NCBI_GP:MDY4306472.1;Name=MDY4306472.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724575.1;locus_tag=SNF32_00155;product=ankyrin repeat domain-containing protein;protein_id=MDY4306472.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 26250 26807 . + . ID=gene-SNF32_00160;Name=SNF32_00160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00160;pseudo=true JAXGFV010000001.1 Protein Homology CDS 26250 26807 . + 0 ID=cds-SNF32_00160;Parent=gene-SNF32_00160;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736568.1;locus_tag=SNF32_00160;product=lytic polysaccharide monooxygenase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 26814 27569 . + . ID=gene-SNF32_00165;Name=SNF32_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00165 JAXGFV010000001.1 GeneMarkS-2+ CDS 26814 27569 . + 0 ID=cds-MDY4306473.1;Parent=gene-SNF32_00165;Dbxref=NCBI_GP:MDY4306473.1;Name=MDY4306473.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00165;product=hypothetical protein;protein_id=MDY4306473.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 27718 28331 . + . ID=gene-SNF32_00170;Name=SNF32_00170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00170;pseudo=true JAXGFV010000001.1 Protein Homology CDS 27718 28331 . + 0 ID=cds-SNF32_00170;Parent=gene-SNF32_00170;Note=frameshifted;Ontology_term=GO:0010181,GO:0016646;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors%2C NAD or NADP as acceptor|0016646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002297470.1;locus_tag=SNF32_00170;product=flavin reductase family protein;pseudo=true;transl_table=11 JAXGFV010000001.1 cmsearch riboswitch 28493 28659 . + . ID=id-JAXGFV010000001.1:28493..28659;Dbxref=RFAM:RF00380;Note=The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria;bound_moiety=magnesium;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch JAXGFV010000001.1 Genbank pseudogene 28978 29858 . + . ID=gene-SNF32_00175;Name=SNF32_00175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00175;pseudo=true JAXGFV010000001.1 Protein Homology CDS 28978 29858 . + 0 ID=cds-SNF32_00175;Parent=gene-SNF32_00175;Note=frameshifted;Ontology_term=GO:0070726;gbkey=CDS;go_process=cell wall assembly|0070726||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737634.1;locus_tag=SNF32_00175;product=LCP family protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 30033 30685 . + . ID=gene-SNF32_00180;Name=SNF32_00180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00180;pseudo=true JAXGFV010000001.1 Protein Homology CDS 30033 30685 . + 0 ID=cds-SNF32_00180;Parent=gene-SNF32_00180;Note=frameshifted;Ontology_term=GO:0046677;gbkey=CDS;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: protein motif:HMM:NF017073.3;locus_tag=SNF32_00180;product=NTF2-like N-terminal transpeptidase domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 30682 30903 . + . ID=gene-SNF32_00185;Name=SNF32_00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00185 JAXGFV010000001.1 Protein Homology CDS 30682 30903 . + 0 ID=cds-MDY4306474.1;Parent=gene-SNF32_00185;Dbxref=NCBI_GP:MDY4306474.1;Name=MDY4306474.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015662.3;locus_tag=SNF32_00185;product=hypothetical protein;protein_id=MDY4306474.1;transl_table=11 JAXGFV010000001.1 Genbank gene 30900 31061 . + . ID=gene-SNF32_00190;Name=SNF32_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00190 JAXGFV010000001.1 Protein Homology CDS 30900 31061 . + 0 ID=cds-MDY4306475.1;Parent=gene-SNF32_00190;Dbxref=NCBI_GP:MDY4306475.1;Name=MDY4306475.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015662.3;locus_tag=SNF32_00190;product=hypothetical protein;protein_id=MDY4306475.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 31123 32060 . + . ID=gene-SNF32_00195;Name=SNF32_00195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00195;pseudo=true JAXGFV010000001.1 Protein Homology CDS 31123 32060 . + 0 ID=cds-SNF32_00195;Parent=gene-SNF32_00195;Note=frameshifted;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: protein motif:HMM:NF013100.3;locus_tag=SNF32_00195;product=penicillin-binding transpeptidase domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 32289 32447 . + . ID=gene-SNF32_00200;Name=SNF32_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00200 JAXGFV010000001.1 GeneMarkS-2+ CDS 32289 32447 . + 0 ID=cds-MDY4306476.1;Parent=gene-SNF32_00200;Dbxref=NCBI_GP:MDY4306476.1;Name=MDY4306476.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00200;product=hypothetical protein;protein_id=MDY4306476.1;transl_table=11 JAXGFV010000001.1 Genbank gene 32516 32923 . - . ID=gene-SNF32_00205;Name=SNF32_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00205 JAXGFV010000001.1 Protein Homology CDS 32516 32923 . - 0 ID=cds-MDY4306477.1;Parent=gene-SNF32_00205;Dbxref=NCBI_GP:MDY4306477.1;Name=MDY4306477.1;Ontology_term=GO:0006812,GO:0055085,GO:1902600;gbkey=CDS;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: protein motif:HMM:NF013188.3;locus_tag=SNF32_00205;product=cation:proton antiporter;protein_id=MDY4306477.1;transl_table=11 JAXGFV010000001.1 Genbank gene 32920 33165 . - . ID=gene-SNF32_00210;Name=SNF32_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00210 JAXGFV010000001.1 GeneMarkS-2+ CDS 32920 33165 . - 0 ID=cds-MDY4306478.1;Parent=gene-SNF32_00210;Dbxref=NCBI_GP:MDY4306478.1;Name=MDY4306478.1;Ontology_term=GO:0006812,GO:0055085,GO:1902600,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00210;product=cation:proton antiporter;protein_id=MDY4306478.1;transl_table=11 JAXGFV010000001.1 Genbank gene 33162 33413 . - . ID=gene-SNF32_00215;Name=SNF32_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00215 JAXGFV010000001.1 Protein Homology CDS 33162 33413 . - 0 ID=cds-MDY4306479.1;Parent=gene-SNF32_00215;Dbxref=NCBI_GP:MDY4306479.1;Name=MDY4306479.1;Ontology_term=GO:0006812,GO:0055085,GO:1902600,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: protein motif:HMM:NF013188.3;locus_tag=SNF32_00215;product=cation:proton antiporter;protein_id=MDY4306479.1;transl_table=11 JAXGFV010000001.1 Genbank gene 33395 33664 . - . ID=gene-SNF32_00220;Name=SNF32_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00220 JAXGFV010000001.1 Protein Homology CDS 33395 33664 . - 0 ID=cds-MDY4306480.1;Parent=gene-SNF32_00220;Dbxref=NCBI_GP:MDY4306480.1;Name=MDY4306480.1;Ontology_term=GO:0006812,GO:0055085,GO:1902600,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: protein motif:HMM:NF013188.3;locus_tag=SNF32_00220;product=cation:proton antiporter;protein_id=MDY4306480.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 33840 34366 . - . ID=gene-SNF32_00225;Name=SNF32_00225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00225;pseudo=true JAXGFV010000001.1 Protein Homology CDS 33840 34366 . - 0 ID=cds-SNF32_00225;Parent=gene-SNF32_00225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724040.1;locus_tag=SNF32_00225;product=DUF308 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 34443 34782 . - . ID=gene-SNF32_00230;Name=SNF32_00230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00230;pseudo=true JAXGFV010000001.1 Protein Homology CDS 34443 34782 . - 0 ID=cds-SNF32_00230;Parent=gene-SNF32_00230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735401.1;locus_tag=SNF32_00230;product=DUF2200 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 34923 36450 . - . ID=gene-SNF32_00235;Name=SNF32_00235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00235;pseudo=true JAXGFV010000001.1 Protein Homology CDS 34923 36450 . - 0 ID=cds-SNF32_00235;Parent=gene-SNF32_00235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735402.1;locus_tag=SNF32_00235;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 36579 37826 . + . ID=gene-SNF32_00240;Name=SNF32_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00240 JAXGFV010000001.1 GeneMarkS-2+ CDS 36579 37826 . + 0 ID=cds-MDY4306481.1;Parent=gene-SNF32_00240;Dbxref=NCBI_GP:MDY4306481.1;Name=MDY4306481.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00240;product=LPXTG cell wall anchor domain-containing protein;protein_id=MDY4306481.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 37898 38870 . - . ID=gene-SNF32_00245;Name=bsh;gbkey=Gene;gene=bsh;gene_biotype=pseudogene;locus_tag=SNF32_00245;pseudo=true JAXGFV010000001.1 Protein Homology CDS 37898 38870 . - 0 ID=cds-SNF32_00245;Parent=gene-SNF32_00245;Note=frameshifted;gbkey=CDS;gene=bsh;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002342103.1;locus_tag=SNF32_00245;product=choloylglycine hydrolase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 38985 39413 . - . ID=gene-SNF32_00250;Name=SNF32_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00250 JAXGFV010000001.1 Protein Homology CDS 38985 39413 . - 0 ID=cds-MDY4306482.1;Parent=gene-SNF32_00250;Dbxref=NCBI_GP:MDY4306482.1;Name=MDY4306482.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735405.1;locus_tag=SNF32_00250;product=MarR family transcriptional regulator;protein_id=MDY4306482.1;transl_table=11 JAXGFV010000001.1 Genbank gene 39478 39864 . - . ID=gene-SNF32_00255;Name=SNF32_00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00255 JAXGFV010000001.1 Protein Homology CDS 39478 39864 . - 0 ID=cds-MDY4306483.1;Parent=gene-SNF32_00255;Dbxref=NCBI_GP:MDY4306483.1;Name=MDY4306483.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723925.1;locus_tag=SNF32_00255;product=Ohr family peroxiredoxin;protein_id=MDY4306483.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 40048 40893 . - . ID=gene-SNF32_00260;Name=SNF32_00260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00260;pseudo=true JAXGFV010000001.1 Protein Homology CDS 40048 40893 . - 0 ID=cds-SNF32_00260;Parent=gene-SNF32_00260;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735407.1;locus_tag=SNF32_00260;product=YitT family protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 41130 41489 . - . ID=gene-SNF32_00265;Name=SNF32_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00265 JAXGFV010000001.1 Protein Homology CDS 41130 41489 . - 0 ID=cds-MDY4306484.1;Parent=gene-SNF32_00265;Dbxref=NCBI_GP:MDY4306484.1;Name=MDY4306484.1;Ontology_term=GO:0047617;gbkey=CDS;go_function=acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723923.1;locus_tag=SNF32_00265;product=PaaI family thioesterase;protein_id=MDY4306484.1;transl_table=11 JAXGFV010000001.1 Genbank gene 42128 42421 . - . ID=gene-SNF32_00270;Name=SNF32_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00270 JAXGFV010000001.1 Protein Homology CDS 42128 42421 . - 0 ID=cds-MDY4306485.1;Parent=gene-SNF32_00270;Dbxref=NCBI_GP:MDY4306485.1;Name=MDY4306485.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024252.3;locus_tag=SNF32_00270;product=helix-turn-helix transcriptional regulator;protein_id=MDY4306485.1;transl_table=11 JAXGFV010000001.1 Genbank gene 42557 42817 . + . ID=gene-SNF32_00275;Name=SNF32_00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00275 JAXGFV010000001.1 GeneMarkS-2+ CDS 42557 42817 . + 0 ID=cds-MDY4306486.1;Parent=gene-SNF32_00275;Dbxref=NCBI_GP:MDY4306486.1;Name=MDY4306486.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00275;product=helix-turn-helix transcriptional regulator;protein_id=MDY4306486.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 43455 43867 . + . ID=gene-SNF32_00280;Name=SNF32_00280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00280;pseudo=true JAXGFV010000001.1 Protein Homology CDS 43455 43867 . + 0 ID=cds-SNF32_00280;Parent=gene-SNF32_00280;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002337268.1;locus_tag=SNF32_00280;product=ArpU family phage packaging/lysis transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 44154 44381 . + . ID=gene-SNF32_00285;Name=SNF32_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00285 JAXGFV010000001.1 GeneMarkS-2+ CDS 44154 44381 . + 0 ID=cds-MDY4306487.1;Parent=gene-SNF32_00285;Dbxref=NCBI_GP:MDY4306487.1;Name=MDY4306487.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00285;product=hypothetical protein;protein_id=MDY4306487.1;transl_table=11 JAXGFV010000001.1 Genbank gene 44388 44660 . + . ID=gene-SNF32_00290;Name=SNF32_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00290 JAXGFV010000001.1 Protein Homology CDS 44388 44660 . + 0 ID=cds-MDY4306488.1;Parent=gene-SNF32_00290;Dbxref=NCBI_GP:MDY4306488.1;Name=MDY4306488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002302588.1;locus_tag=SNF32_00290;product=holin;protein_id=MDY4306488.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 44700 45588 . + . ID=gene-SNF32_00295;Name=SNF32_00295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00295;pseudo=true JAXGFV010000001.1 Protein Homology CDS 44700 45588 . + 0 ID=cds-SNF32_00295;Parent=gene-SNF32_00295;Note=frameshifted;Ontology_term=GO:0042834,GO:0046872;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735414.1;locus_tag=SNF32_00295;product=peptidoglycan recognition family protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 45711 46712 . + . ID=gene-SNF32_00300;Name=SNF32_00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00300 JAXGFV010000001.1 Protein Homology CDS 45711 46712 . + 0 ID=cds-MDY4306489.1;Parent=gene-SNF32_00300;Dbxref=NCBI_GP:MDY4306489.1;Name=MDY4306489.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016612296.1;locus_tag=SNF32_00300;product=N-acetylmuramoyl-L-alanine amidase;protein_id=MDY4306489.1;transl_table=11 JAXGFV010000001.1 Genbank gene 46991 47278 . + . ID=gene-SNF32_00305;Name=SNF32_00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00305 JAXGFV010000001.1 GeneMarkS-2+ CDS 46991 47278 . + 0 ID=cds-MDY4306490.1;Parent=gene-SNF32_00305;Dbxref=NCBI_GP:MDY4306490.1;Name=MDY4306490.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00305;product=hypothetical protein;protein_id=MDY4306490.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 47716 48528 . + . ID=gene-SNF32_00310;Name=menB;gbkey=Gene;gene=menB;gene_biotype=pseudogene;locus_tag=SNF32_00310;pseudo=true JAXGFV010000001.1 Protein Homology CDS 47716 48528 . + 0 ID=cds-SNF32_00310;Parent=gene-SNF32_00310;Note=frameshifted;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003127527.1;locus_tag=SNF32_00310;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 48563 49312 . + . ID=gene-SNF32_00315;Name=SNF32_00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00315 JAXGFV010000001.1 Protein Homology CDS 48563 49312 . + 0 ID=cds-MDY4306491.1;Parent=gene-SNF32_00315;Dbxref=NCBI_GP:MDY4306491.1;Name=MDY4306491.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.3;locus_tag=SNF32_00315;product=AMP-binding protein;protein_id=MDY4306491.1;transl_table=11 JAXGFV010000001.1 Genbank gene 49347 49985 . + . ID=gene-SNF32_00320;Name=SNF32_00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00320 JAXGFV010000001.1 Protein Homology CDS 49347 49985 . + 0 ID=cds-MDY4306492.1;Parent=gene-SNF32_00320;Dbxref=NCBI_GP:MDY4306492.1;Name=MDY4306492.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.3;locus_tag=SNF32_00320;product=AMP-binding protein;protein_id=MDY4306492.1;transl_table=11 JAXGFV010000001.1 Genbank gene 50252 51316 . + . ID=gene-SNF32_00325;Name=SNF32_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00325 JAXGFV010000001.1 Protein Homology CDS 50252 51316 . + 0 ID=cds-MDY4306493.1;Parent=gene-SNF32_00325;Dbxref=NCBI_GP:MDY4306493.1;Name=MDY4306493.1;Ontology_term=GO:0009234,GO:0008909,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isochorismate synthase activity|0008909||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010750936.1;locus_tag=SNF32_00325;product=isochorismate synthase;protein_id=MDY4306493.1;transl_table=11 JAXGFV010000001.1 Genbank gene 51313 51972 . + . ID=gene-SNF32_00330;Name=SNF32_00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00330 JAXGFV010000001.1 Protein Homology CDS 51313 51972 . + 0 ID=cds-MDY4306494.1;Parent=gene-SNF32_00330;Dbxref=NCBI_GP:MDY4306494.1;Name=MDY4306494.1;Ontology_term=GO:0030976;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: protein motif:HMM:NF014795.3;locus_tag=SNF32_00330;product=thiamine pyrophosphate-binding protein;protein_id=MDY4306494.1;transl_table=11 JAXGFV010000001.1 Genbank gene 51938 52171 . + . ID=gene-SNF32_00335;Name=SNF32_00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00335 JAXGFV010000001.1 Protein Homology CDS 51938 52171 . + 0 ID=cds-MDY4306495.1;Parent=gene-SNF32_00335;Dbxref=NCBI_GP:MDY4306495.1;Name=MDY4306495.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027896.3;locus_tag=SNF32_00335;product=hypothetical protein;protein_id=MDY4306495.1;transl_table=11 JAXGFV010000001.1 Genbank gene 52227 52826 . + . ID=gene-SNF32_00340;Name=SNF32_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00340 JAXGFV010000001.1 Protein Homology CDS 52227 52826 . + 0 ID=cds-MDY4306496.1;Parent=gene-SNF32_00340;Dbxref=NCBI_GP:MDY4306496.1;Name=MDY4306496.1;Ontology_term=GO:0003824,GO:0030976;gbkey=CDS;go_function=catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: protein motif:HMM:NF014794.3;locus_tag=SNF32_00340;product=thiamine pyrophosphate-dependent enzyme;protein_id=MDY4306496.1;transl_table=11 JAXGFV010000001.1 Genbank gene 52802 52936 . + . ID=gene-SNF32_00345;Name=SNF32_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00345 JAXGFV010000001.1 GeneMarkS-2+ CDS 52802 52936 . + 0 ID=cds-MDY4306497.1;Parent=gene-SNF32_00345;Dbxref=NCBI_GP:MDY4306497.1;Name=MDY4306497.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00345;product=hypothetical protein;protein_id=MDY4306497.1;transl_table=11 JAXGFV010000001.1 Genbank gene 53016 53450 . + . ID=gene-SNF32_00350;Name=SNF32_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00350 JAXGFV010000001.1 Protein Homology CDS 53016 53450 . + 0 ID=cds-MDY4306498.1;Parent=gene-SNF32_00350;Dbxref=NCBI_GP:MDY4306498.1;Name=MDY4306498.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012770.3;locus_tag=SNF32_00350;product=alpha/beta fold hydrolase;protein_id=MDY4306498.1;transl_table=11 JAXGFV010000001.1 Genbank gene 53840 54952 . + . ID=gene-SNF32_00355;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=SNF32_00355 JAXGFV010000001.1 Protein Homology CDS 53840 54952 . + 0 ID=cds-MDY4306499.1;Parent=gene-SNF32_00355;Dbxref=NCBI_GP:MDY4306499.1;Name=MDY4306499.1;Ontology_term=GO:0009234,GO:0016836;gbkey=CDS;gene=menC;go_function=hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737612.1;locus_tag=SNF32_00355;product=o-succinylbenzoate synthase;protein_id=MDY4306499.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 55110 56874 . + . ID=gene-SNF32_00360;Name=SNF32_00360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00360;pseudo=true JAXGFV010000001.1 Protein Homology CDS 55110 56874 . + 0 ID=cds-SNF32_00360;Parent=gene-SNF32_00360;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008271692.1;locus_tag=SNF32_00360;product=glycoside hydrolase family 13 protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 57025 58228 . + . ID=gene-SNF32_00365;Name=SNF32_00365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00365;pseudo=true JAXGFV010000001.1 Protein Homology CDS 57025 58228 . + 0 ID=cds-SNF32_00365;Parent=gene-SNF32_00365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014074233.1;locus_tag=SNF32_00365;product=extracellular solute-binding protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 58373 59669 . + . ID=gene-SNF32_00370;Name=SNF32_00370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00370;pseudo=true JAXGFV010000001.1 Protein Homology CDS 58373 59669 . + 0 ID=cds-SNF32_00370;Parent=gene-SNF32_00370;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002400236.1;locus_tag=SNF32_00370;product=sugar ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 59647 60521 . + . ID=gene-SNF32_00375;Name=SNF32_00375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00375;pseudo=true JAXGFV010000001.1 Protein Homology CDS 59647 60521 . + 0 ID=cds-SNF32_00375;Parent=gene-SNF32_00375;Note=frameshifted;Ontology_term=GO:0008643,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018368846.1;locus_tag=SNF32_00375;product=sugar ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 60534 61354 . + . ID=gene-SNF32_00380;Name=SNF32_00380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00380;pseudo=true JAXGFV010000001.1 Protein Homology CDS 60534 61354 . + 0 ID=cds-SNF32_00380;Parent=gene-SNF32_00380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723260.1;locus_tag=SNF32_00380;product=maltodextrose utilization protein MalA;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 61545 62695 . + . ID=gene-SNF32_00385;Name=SNF32_00385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00385;pseudo=true JAXGFV010000001.1 Protein Homology CDS 61545 62695 . + 0 ID=cds-SNF32_00385;Parent=gene-SNF32_00385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723261.1;locus_tag=SNF32_00385;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 62872 63512 . + . ID=gene-SNF32_00390;Name=SNF32_00390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00390;pseudo=true JAXGFV010000001.1 Protein Homology CDS 62872 63512 . + 0 ID=cds-SNF32_00390;Parent=gene-SNF32_00390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010738701.1;locus_tag=SNF32_00390;product=PepSY domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 63596 64537 . + . ID=gene-SNF32_00395;Name=SNF32_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00395 JAXGFV010000001.1 Protein Homology CDS 63596 64537 . + 0 ID=cds-MDY4306500.1;Parent=gene-SNF32_00395;Dbxref=NCBI_GP:MDY4306500.1;Name=MDY4306500.1;Ontology_term=GO:0006221,GO:0004152;gbkey=CDS;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002290739.1;locus_tag=SNF32_00395;product=dihydroorotate oxidase;protein_id=MDY4306500.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 64684 66139 . + . ID=gene-SNF32_00400;Name=SNF32_00400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00400;pseudo=true JAXGFV010000001.1 Protein Homology CDS 64684 66139 . + 0 ID=cds-SNF32_00400;Parent=gene-SNF32_00400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735430.1;locus_tag=SNF32_00400;product=amidase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 66402 67090 . + . ID=gene-SNF32_00405;Name=SNF32_00405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00405;pseudo=true JAXGFV010000001.1 Protein Homology CDS 66402 67090 . + 0 ID=cds-SNF32_00405;Parent=gene-SNF32_00405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016853260.1;locus_tag=SNF32_00405;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 67098 68057 . + . ID=gene-SNF32_00410;Name=SNF32_00410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00410;pseudo=true JAXGFV010000001.1 Protein Homology CDS 67098 68057 . + 0 ID=cds-SNF32_00410;Parent=gene-SNF32_00410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735432.1;locus_tag=SNF32_00410;product=sce7725 family protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 68071 68576 . + . ID=gene-SNF32_00415;Name=SNF32_00415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00415;pseudo=true JAXGFV010000001.1 Protein Homology CDS 68071 68576 . + 0 ID=cds-SNF32_00415;Parent=gene-SNF32_00415;Note=frameshifted;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735433.1;locus_tag=SNF32_00415;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 68607 68996 . - . ID=gene-SNF32_00420;Name=SNF32_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00420 JAXGFV010000001.1 Protein Homology CDS 68607 68996 . - 0 ID=cds-MDY4306501.1;Parent=gene-SNF32_00420;Dbxref=NCBI_GP:MDY4306501.1;Name=MDY4306501.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012832.3;locus_tag=SNF32_00420;product=hypothetical protein;protein_id=MDY4306501.1;transl_table=11 JAXGFV010000001.1 Genbank gene 69334 70515 . - . ID=gene-SNF32_00425;Name=SNF32_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00425 JAXGFV010000001.1 Protein Homology CDS 69334 70515 . - 0 ID=cds-MDY4306502.1;Parent=gene-SNF32_00425;Dbxref=NCBI_GP:MDY4306502.1;Name=MDY4306502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002335718.1;locus_tag=SNF32_00425;product=nucleoside transporter C-terminal domain-containing protein;protein_id=MDY4306502.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 70932 72422 . - . ID=gene-SNF32_00430;Name=SNF32_00430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00430;pseudo=true JAXGFV010000001.1 Protein Homology CDS 70932 72422 . - 0 ID=cds-SNF32_00430;Parent=gene-SNF32_00430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013669551.1;locus_tag=SNF32_00430;product=DUF1846 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 72560 72769 . + . ID=gene-SNF32_00435;Name=SNF32_00435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00435;pseudo=true JAXGFV010000001.1 Protein Homology CDS 72560 72769 . + 0 ID=cds-SNF32_00435;Parent=gene-SNF32_00435;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002295907.1;locus_tag=SNF32_00435;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 72969 73842 . + . ID=gene-SNF32_00440;Name=SNF32_00440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00440;pseudo=true JAXGFV010000001.1 Protein Homology CDS 72969 73842 . + 0 ID=cds-SNF32_00440;Parent=gene-SNF32_00440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735438.1;locus_tag=SNF32_00440;product=viral A-type inclusion protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 73842 74909 . + . ID=gene-SNF32_00445;Name=SNF32_00445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00445;pseudo=true JAXGFV010000001.1 Protein Homology CDS 73842 74909 . + 0 ID=cds-SNF32_00445;Parent=gene-SNF32_00445;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723216.1;locus_tag=SNF32_00445;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 75232 75357 . + . ID=gene-SNF32_00450;Name=SNF32_00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00450 JAXGFV010000001.1 Protein Homology CDS 75232 75357 . + 0 ID=cds-MDY4306503.1;Parent=gene-SNF32_00450;Dbxref=NCBI_GP:MDY4306503.1;Name=MDY4306503.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025833.3;locus_tag=SNF32_00450;product=DUF4430 domain-containing protein;protein_id=MDY4306503.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 75449 76419 . + . ID=gene-SNF32_00455;Name=SNF32_00455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00455;pseudo=true JAXGFV010000001.1 Protein Homology CDS 75449 76419 . + 0 ID=cds-SNF32_00455;Parent=gene-SNF32_00455;Note=frameshifted;Ontology_term=GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723214.1;locus_tag=SNF32_00455;product=cation diffusion facilitator family transporter;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 76682 77458 . + . ID=gene-SNF32_00460;Name=SNF32_00460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00460;pseudo=true JAXGFV010000001.1 Protein Homology CDS 76682 77458 . + 0 ID=cds-SNF32_00460;Parent=gene-SNF32_00460;Note=frameshifted%3B internal stop;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002315001.1;locus_tag=SNF32_00460;product=AzlC family ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 77451 77768 . + . ID=gene-SNF32_00465;Name=SNF32_00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00465 JAXGFV010000001.1 Protein Homology CDS 77451 77768 . + 0 ID=cds-MDY4306504.1;Parent=gene-SNF32_00465;Dbxref=NCBI_GP:MDY4306504.1;Name=MDY4306504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005877655.1;locus_tag=SNF32_00465;product=AzlD domain-containing protein;protein_id=MDY4306504.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 77897 79483 . + . ID=gene-SNF32_00470;Name=SNF32_00470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00470;pseudo=true JAXGFV010000001.1 Protein Homology CDS 77897 79483 . + 0 ID=cds-SNF32_00470;Parent=gene-SNF32_00470;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735446.1;locus_tag=SNF32_00470;product=oligosaccharide flippase family protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 79746 80592 . + . ID=gene-SNF32_00475;Name=SNF32_00475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00475;pseudo=true JAXGFV010000001.1 Protein Homology CDS 79746 80592 . + 0 ID=cds-SNF32_00475;Parent=gene-SNF32_00475;Note=frameshifted;Ontology_term=GO:0005504;gbkey=CDS;go_function=fatty acid binding|0005504||IEA;inference=COORDINATES: protein motif:HMM:NF014679.3;locus_tag=SNF32_00475;product=DegV family protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 80746 81225 . + . ID=gene-SNF32_00480;Name=SNF32_00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00480 JAXGFV010000001.1 Protein Homology CDS 80746 81225 . + 0 ID=cds-MDY4306505.1;Parent=gene-SNF32_00480;Dbxref=NCBI_GP:MDY4306505.1;Name=MDY4306505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002400217.1;locus_tag=SNF32_00480;product=DUF6530 family protein;protein_id=MDY4306505.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 81248 83479 . + . ID=gene-SNF32_00485;Name=SNF32_00485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00485;pseudo=true JAXGFV010000001.1 Protein Homology CDS 81248 83479 . + 0 ID=cds-SNF32_00485;Parent=gene-SNF32_00485;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002309236.1;locus_tag=SNF32_00485;product=AAA family ATPase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 83654 85290 . + . ID=gene-SNF32_00490;Name=SNF32_00490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00490;pseudo=true JAXGFV010000001.1 Protein Homology CDS 83654 85290 . + 0 ID=cds-SNF32_00490;Parent=gene-SNF32_00490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005877679.1;locus_tag=SNF32_00490;product=alpha-glucosidase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 85353 85901 . - . ID=gene-SNF32_00495;Name=SNF32_00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00495 JAXGFV010000001.1 Protein Homology CDS 85353 85901 . - 0 ID=cds-MDY4306506.1;Parent=gene-SNF32_00495;Dbxref=NCBI_GP:MDY4306506.1;Name=MDY4306506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005877688.1;locus_tag=SNF32_00495;product=TIGR01440 family protein;protein_id=MDY4306506.1;transl_table=11 JAXGFV010000001.1 Genbank gene 85904 86398 . - . ID=gene-SNF32_00500;Name=SNF32_00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00500 JAXGFV010000001.1 Protein Homology CDS 85904 86398 . - 0 ID=cds-MDY4306507.1;Parent=gene-SNF32_00500;Dbxref=NCBI_GP:MDY4306507.1;Name=MDY4306507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011109510.1;locus_tag=SNF32_00500;product=ECF transporter S component;protein_id=MDY4306507.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 86402 87222 . - . ID=gene-SNF32_00505;Name=SNF32_00505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00505;pseudo=true JAXGFV010000001.1 Protein Homology CDS 86402 87222 . - 0 ID=cds-SNF32_00505;Parent=gene-SNF32_00505;Note=frameshifted;Ontology_term=GO:0009228,GO:0008972;gbkey=CDS;go_function=phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723946.1;locus_tag=SNF32_00505;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 87380 88905 . - . ID=gene-SNF32_00510;Name=SNF32_00510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00510;pseudo=true JAXGFV010000001.1 Protein Homology CDS 87380 88905 . - 0 ID=cds-SNF32_00510;Parent=gene-SNF32_00510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723945.1;locus_tag=SNF32_00510;product=acyl-CoA synthetase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 89520 90514 . - . ID=gene-SNF32_00515;Name=SNF32_00515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00515;pseudo=true JAXGFV010000001.1 Protein Homology CDS 89520 90514 . - 0 ID=cds-SNF32_00515;Parent=gene-SNF32_00515;Note=frameshifted;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735455.1;locus_tag=SNF32_00515;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 90762 92068 . - . ID=gene-SNF32_00520;Name=SNF32_00520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00520;pseudo=true JAXGFV010000001.1 Protein Homology CDS 90762 92068 . - 0 ID=cds-SNF32_00520;Parent=gene-SNF32_00520;Note=frameshifted;Ontology_term=GO:0007165,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016185134.1;locus_tag=SNF32_00520;product=HAMP domain-containing sensor histidine kinase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 92073 92747 . - . ID=gene-SNF32_00525;Name=SNF32_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00525 JAXGFV010000001.1 Protein Homology CDS 92073 92747 . - 0 ID=cds-MDY4306508.1;Parent=gene-SNF32_00525;Dbxref=NCBI_GP:MDY4306508.1;Name=MDY4306508.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016176651.1;locus_tag=SNF32_00525;product=response regulator transcription factor;protein_id=MDY4306508.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 92888 93611 . + . ID=gene-SNF32_00530;Name=SNF32_00530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00530;pseudo=true JAXGFV010000001.1 Protein Homology CDS 92888 93611 . + 0 ID=cds-SNF32_00530;Parent=gene-SNF32_00530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735459.1;locus_tag=SNF32_00530;product=polyphosphate polymerase domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 93601 94273 . + . ID=gene-SNF32_00535;Name=SNF32_00535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00535;pseudo=true JAXGFV010000001.1 Protein Homology CDS 93601 94273 . + 0 ID=cds-SNF32_00535;Parent=gene-SNF32_00535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005233649.1;locus_tag=SNF32_00535;product=DUF4956 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 94287 96158 . + . ID=gene-SNF32_00540;Name=SNF32_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00540 JAXGFV010000001.1 Protein Homology CDS 94287 96158 . + 0 ID=cds-MDY4306509.1;Parent=gene-SNF32_00540;Dbxref=NCBI_GP:MDY4306509.1;Name=MDY4306509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016621916.1;locus_tag=SNF32_00540;product=carbohydrate-binding domain-containing protein;protein_id=MDY4306509.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 96410 97479 . + . ID=gene-SNF32_00545;Name=SNF32_00545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00545;pseudo=true JAXGFV010000001.1 Protein Homology CDS 96410 97479 . + 0 ID=cds-SNF32_00545;Parent=gene-SNF32_00545;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002286061.1;locus_tag=SNF32_00545;product=ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 97487 98164 . + . ID=gene-SNF32_00550;Name=SNF32_00550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00550;pseudo=true JAXGFV010000001.1 Protein Homology CDS 97487 98164 . + 0 ID=cds-SNF32_00550;Parent=gene-SNF32_00550;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735464.1;locus_tag=SNF32_00550;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 98183 98794 . + . ID=gene-SNF32_00555;Name=SNF32_00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00555 JAXGFV010000001.1 Protein Homology CDS 98183 98794 . + 0 ID=cds-MDY4306510.1;Parent=gene-SNF32_00555;Dbxref=NCBI_GP:MDY4306510.1;Name=MDY4306510.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723350.1;locus_tag=SNF32_00555;product=TetR family transcriptional regulator;protein_id=MDY4306510.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 99053 99630 . + . ID=gene-SNF32_00560;Name=SNF32_00560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00560;pseudo=true JAXGFV010000001.1 Protein Homology CDS 99053 99630 . + 0 ID=cds-SNF32_00560;Parent=gene-SNF32_00560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723351.1;locus_tag=SNF32_00560;product=histidine phosphatase family protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 99727 100596 . - . ID=gene-SNF32_00565;Name=SNF32_00565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00565;pseudo=true JAXGFV010000001.1 Protein Homology CDS 99727 100596 . - 0 ID=cds-SNF32_00565;Parent=gene-SNF32_00565;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735467.1;locus_tag=SNF32_00565;product=MurR/RpiR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 100807 101841 . + . ID=gene-SNF32_00570;Name=SNF32_00570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00570;pseudo=true JAXGFV010000001.1 Protein Homology CDS 100807 101841 . + 0 ID=cds-SNF32_00570;Parent=gene-SNF32_00570;Note=frameshifted;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723353.1;locus_tag=SNF32_00570;product=Gfo/Idh/MocA family oxidoreductase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 102055 103094 . + . ID=gene-SNF32_00575;Name=SNF32_00575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00575;pseudo=true JAXGFV010000001.1 Protein Homology CDS 102055 103094 . + 0 ID=cds-SNF32_00575;Parent=gene-SNF32_00575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735469.1;locus_tag=SNF32_00575;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 103240 104561 . + . ID=gene-SNF32_00580;Name=SNF32_00580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00580;pseudo=true JAXGFV010000001.1 Protein Homology CDS 103240 104561 . + 0 ID=cds-SNF32_00580;Parent=gene-SNF32_00580;Note=frameshifted;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724024.1;locus_tag=SNF32_00580;product=PTS transporter subunit EIIC;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 104585 105022 . + . ID=gene-SNF32_00585;Name=SNF32_00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00585 JAXGFV010000001.1 Protein Homology CDS 104585 105022 . + 0 ID=cds-MDY4306511.1;Parent=gene-SNF32_00585;Dbxref=NCBI_GP:MDY4306511.1;Name=MDY4306511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724025.1;locus_tag=SNF32_00585;product=DUF3284 domain-containing protein;protein_id=MDY4306511.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 105115 107358 . + . ID=gene-SNF32_00590;Name=SNF32_00590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00590;pseudo=true JAXGFV010000001.1 Protein Homology CDS 105115 107358 . + 0 ID=cds-SNF32_00590;Parent=gene-SNF32_00590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735472.1;locus_tag=SNF32_00590;product=alpha-galactosidase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 107355 109401 . + . ID=gene-SNF32_00595;Name=SNF32_00595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00595;pseudo=true JAXGFV010000001.1 Protein Homology CDS 107355 109401 . + 0 ID=cds-SNF32_00595;Parent=gene-SNF32_00595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005234797.1;locus_tag=SNF32_00595;product=beta-galactosidase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 109485 109778 . + . ID=gene-SNF32_00600;Name=SNF32_00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00600 JAXGFV010000001.1 Protein Homology CDS 109485 109778 . + 0 ID=cds-MDY4306512.1;Parent=gene-SNF32_00600;Dbxref=NCBI_GP:MDY4306512.1;Name=MDY4306512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735475.1;locus_tag=SNF32_00600;product=rRNA processing protein;protein_id=MDY4306512.1;transl_table=11 JAXGFV010000001.1 Genbank gene 109939 110130 . + . ID=gene-SNF32_00605;Name=SNF32_00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00605 JAXGFV010000001.1 GeneMarkS-2+ CDS 109939 110130 . + 0 ID=cds-MDY4306513.1;Parent=gene-SNF32_00605;Dbxref=NCBI_GP:MDY4306513.1;Name=MDY4306513.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00605;product=hypothetical protein;protein_id=MDY4306513.1;transl_table=11 JAXGFV010000001.1 Genbank gene 110166 110510 . + . ID=gene-SNF32_00610;Name=SNF32_00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00610 JAXGFV010000001.1 Protein Homology CDS 110166 110510 . + 0 ID=cds-MDY4306514.1;Parent=gene-SNF32_00610;Dbxref=NCBI_GP:MDY4306514.1;Name=MDY4306514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735477.1;locus_tag=SNF32_00610;product=hypothetical protein;protein_id=MDY4306514.1;transl_table=11 JAXGFV010000001.1 Genbank gene 110507 110767 . + . ID=gene-SNF32_00615;Name=SNF32_00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00615 JAXGFV010000001.1 GeneMarkS-2+ CDS 110507 110767 . + 0 ID=cds-MDY4306515.1;Parent=gene-SNF32_00615;Dbxref=NCBI_GP:MDY4306515.1;Name=MDY4306515.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00615;product=hypothetical protein;protein_id=MDY4306515.1;transl_table=11 JAXGFV010000001.1 Genbank gene 110785 111030 . + . ID=gene-SNF32_00620;Name=SNF32_00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00620 JAXGFV010000001.1 GeneMarkS-2+ CDS 110785 111030 . + 0 ID=cds-MDY4306516.1;Parent=gene-SNF32_00620;Dbxref=NCBI_GP:MDY4306516.1;Name=MDY4306516.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00620;product=hypothetical protein;protein_id=MDY4306516.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 111169 112085 . + . ID=gene-SNF32_00625;Name=SNF32_00625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00625;pseudo=true JAXGFV010000001.1 Protein Homology CDS 111169 112085 . + 0 ID=cds-SNF32_00625;Parent=gene-SNF32_00625;Note=frameshifted;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003131609.1;locus_tag=SNF32_00625;product=L-lactate dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 113409 113795 . - . ID=gene-SNF32_00630;Name=SNF32_00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00630 JAXGFV010000001.1 Protein Homology CDS 113409 113795 . - 0 ID=cds-MDY4306517.1;Parent=gene-SNF32_00630;Dbxref=NCBI_GP:MDY4306517.1;Name=MDY4306517.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012892.3;locus_tag=SNF32_00630;product=cation-translocating P-type ATPase C-terminal domain-containing protein;protein_id=MDY4306517.1;transl_table=11 JAXGFV010000001.1 Genbank gene 113792 114412 . - . ID=gene-SNF32_00635;Name=SNF32_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00635 JAXGFV010000001.1 Protein Homology CDS 113792 114412 . - 0 ID=cds-MDY4306518.1;Parent=gene-SNF32_00635;Dbxref=NCBI_GP:MDY4306518.1;Name=MDY4306518.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:TIGR01494.1;locus_tag=SNF32_00635;product=HAD-IC family P-type ATPase;protein_id=MDY4306518.1;transl_table=11 JAXGFV010000001.1 Genbank gene 114409 114711 . - . ID=gene-SNF32_00640;Name=SNF32_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00640 JAXGFV010000001.1 Protein Homology CDS 114409 114711 . - 0 ID=cds-MDY4306519.1;Parent=gene-SNF32_00640;Dbxref=NCBI_GP:MDY4306519.1;Name=MDY4306519.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024643.3;locus_tag=SNF32_00640;product=hypothetical protein;protein_id=MDY4306519.1;transl_table=11 JAXGFV010000001.1 Genbank gene 114934 115317 . - . ID=gene-SNF32_00645;Name=SNF32_00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00645 JAXGFV010000001.1 Protein Homology CDS 114934 115317 . - 0 ID=cds-MDY4306520.1;Parent=gene-SNF32_00645;Dbxref=NCBI_GP:MDY4306520.1;Name=MDY4306520.1;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:TIGR01494.1;locus_tag=SNF32_00645;product=HAD-IC family P-type ATPase;protein_id=MDY4306520.1;transl_table=11 JAXGFV010000001.1 Genbank gene 115296 115634 . - . ID=gene-SNF32_00650;Name=SNF32_00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00650 JAXGFV010000001.1 Protein Homology CDS 115296 115634 . - 0 ID=cds-MDY4306521.1;Parent=gene-SNF32_00650;Dbxref=NCBI_GP:MDY4306521.1;Name=MDY4306521.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012350.3;locus_tag=SNF32_00650;product=hypothetical protein;protein_id=MDY4306521.1;transl_table=11 JAXGFV010000001.1 Genbank gene 115631 115954 . - . ID=gene-SNF32_00655;Name=SNF32_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00655 JAXGFV010000001.1 Protein Homology CDS 115631 115954 . - 0 ID=cds-MDY4306522.1;Parent=gene-SNF32_00655;Dbxref=NCBI_GP:MDY4306522.1;Name=MDY4306522.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012893.3;locus_tag=SNF32_00655;product=cation-transporting P-type ATPase;protein_id=MDY4306522.1;transl_table=11 JAXGFV010000001.1 Genbank gene 116216 116755 . + . ID=gene-SNF32_00660;Name=SNF32_00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00660 JAXGFV010000001.1 Protein Homology CDS 116216 116755 . + 0 ID=cds-MDY4306523.1;Parent=gene-SNF32_00660;Dbxref=NCBI_GP:MDY4306523.1;Name=MDY4306523.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011680526.1;locus_tag=SNF32_00660;product=GNAT family N-acetyltransferase;protein_id=MDY4306523.1;transl_table=11 JAXGFV010000001.1 Genbank gene 116740 117021 . - . ID=gene-SNF32_00665;Name=SNF32_00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00665 JAXGFV010000001.1 Protein Homology CDS 116740 117021 . - 0 ID=cds-MDY4306524.1;Parent=gene-SNF32_00665;Dbxref=NCBI_GP:MDY4306524.1;Name=MDY4306524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735484.1;locus_tag=SNF32_00665;product=hypothetical protein;protein_id=MDY4306524.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 117106 119291 . - . ID=gene-SNF32_00670;Name=topB;gbkey=Gene;gene=topB;gene_biotype=pseudogene;locus_tag=SNF32_00670;pseudo=true JAXGFV010000001.1 Protein Homology CDS 117106 119291 . - 0 ID=cds-SNF32_00670;Parent=gene-SNF32_00670;Note=frameshifted;Ontology_term=GO:0006265,GO:0003677,GO:0003917;gbkey=CDS;gene=topB;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016624844.1;locus_tag=SNF32_00670;product=DNA topoisomerase III;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 119710 119910 . - . ID=gene-SNF32_00675;Name=SNF32_00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00675 JAXGFV010000001.1 GeneMarkS-2+ CDS 119710 119910 . - 0 ID=cds-MDY4306525.1;Parent=gene-SNF32_00675;Dbxref=NCBI_GP:MDY4306525.1;Name=MDY4306525.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00675;product=hypothetical protein;protein_id=MDY4306525.1;transl_table=11 JAXGFV010000001.1 Genbank gene 119909 121546 . + . ID=gene-SNF32_00680;Name=SNF32_00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00680 JAXGFV010000001.1 GeneMarkS-2+ CDS 119909 121546 . + 0 ID=cds-MDY4306526.1;Parent=gene-SNF32_00680;Dbxref=NCBI_GP:MDY4306526.1;Name=MDY4306526.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00680;product=hypothetical protein;protein_id=MDY4306526.1;transl_table=11 JAXGFV010000001.1 Genbank gene 121704 122129 . + . ID=gene-SNF32_00685;Name=SNF32_00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00685 JAXGFV010000001.1 GeneMarkS-2+ CDS 121704 122129 . + 0 ID=cds-MDY4306527.1;Parent=gene-SNF32_00685;Dbxref=NCBI_GP:MDY4306527.1;Name=MDY4306527.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00685;product=hypothetical protein;protein_id=MDY4306527.1;transl_table=11 JAXGFV010000001.1 Genbank gene 122126 122311 . + . ID=gene-SNF32_00690;Name=SNF32_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00690 JAXGFV010000001.1 GeneMarkS-2+ CDS 122126 122311 . + 0 ID=cds-MDY4306528.1;Parent=gene-SNF32_00690;Dbxref=NCBI_GP:MDY4306528.1;Name=MDY4306528.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00690;product=hypothetical protein;protein_id=MDY4306528.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 122425 122690 . - . ID=gene-SNF32_00695;Name=SNF32_00695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00695;pseudo=true JAXGFV010000001.1 Protein Homology CDS 122425 122690 . - 0 ID=cds-SNF32_00695;Parent=gene-SNF32_00695;Note=frameshifted%3B internal stop;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002319468.1;locus_tag=SNF32_00695;product=Txe/YoeB family addiction module toxin;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 122690 122951 . - . ID=gene-SNF32_00700;Name=SNF32_00700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00700;pseudo=true JAXGFV010000001.1 Protein Homology CDS 122690 122951 . - 0 ID=cds-SNF32_00700;Parent=gene-SNF32_00700;Note=frameshifted;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002294199.1;locus_tag=SNF32_00700;product=type II toxin-antitoxin system Phd/YefM family antitoxin;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 123114 124259 . - . ID=gene-SNF32_00705;Name=SNF32_00705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00705;pseudo=true JAXGFV010000001.1 Protein Homology CDS 123114 124259 . - 0 ID=cds-SNF32_00705;Parent=gene-SNF32_00705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002400183.1;locus_tag=SNF32_00705;product=LCP family protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 124374 125231 . - . ID=gene-SNF32_00710;Name=SNF32_00710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00710;pseudo=true JAXGFV010000001.1 Protein Homology CDS 124374 125231 . - 0 ID=cds-SNF32_00710;Parent=gene-SNF32_00710;Note=frameshifted;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735499.1;locus_tag=SNF32_00710;product=shikimate dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 125412 126131 . - . ID=gene-SNF32_00715;Name=SNF32_00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00715 JAXGFV010000001.1 Protein Homology CDS 125412 126131 . - 0 ID=cds-MDY4306529.1;Parent=gene-SNF32_00715;Dbxref=NCBI_GP:MDY4306529.1;Name=MDY4306529.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002289629.1;locus_tag=SNF32_00715;product=ATP-binding cassette domain-containing protein;protein_id=MDY4306529.1;transl_table=11 JAXGFV010000001.1 Genbank gene 126184 127065 . - . ID=gene-SNF32_00720;Name=SNF32_00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00720 JAXGFV010000001.1 Protein Homology CDS 126184 127065 . - 0 ID=cds-MDY4306530.1;Parent=gene-SNF32_00720;Dbxref=NCBI_GP:MDY4306530.1;Name=MDY4306530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735501.1;locus_tag=SNF32_00720;product=ABC transporter permease;protein_id=MDY4306530.1;transl_table=11 JAXGFV010000001.1 Genbank gene 127062 128087 . - . ID=gene-SNF32_00725;Name=trpX;gbkey=Gene;gene=trpX;gene_biotype=protein_coding;locus_tag=SNF32_00725 JAXGFV010000001.1 Protein Homology CDS 127062 128087 . - 0 ID=cds-MDY4306531.1;Parent=gene-SNF32_00725;Dbxref=NCBI_GP:MDY4306531.1;Name=MDY4306531.1;gbkey=CDS;gene=trpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722827.1;locus_tag=SNF32_00725;product=tryptophan ABC transporter substrate-binding protein;protein_id=MDY4306531.1;transl_table=11 JAXGFV010000001.1 Genbank gene 128506 129147 . - . ID=gene-SNF32_00730;Name=SNF32_00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00730 JAXGFV010000001.1 Protein Homology CDS 128506 129147 . - 0 ID=cds-MDY4306532.1;Parent=gene-SNF32_00730;Dbxref=NCBI_GP:MDY4306532.1;Name=MDY4306532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735503.1;locus_tag=SNF32_00730;product=hypothetical protein;protein_id=MDY4306532.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 129324 131021 . + . ID=gene-SNF32_00735;Name=efbA;gbkey=Gene;gene=efbA;gene_biotype=pseudogene;locus_tag=SNF32_00735;pseudo=true JAXGFV010000001.1 Protein Homology CDS 129324 131021 . + 0 ID=cds-SNF32_00735;Parent=gene-SNF32_00735;Note=frameshifted;gbkey=CDS;gene=efbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005876049.1;locus_tag=SNF32_00735;product=fibronectin-binding protein EfbA;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 131098 131313 . - . ID=gene-SNF32_00740;Name=SNF32_00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00740 JAXGFV010000001.1 GeneMarkS-2+ CDS 131098 131313 . - 0 ID=cds-MDY4306533.1;Parent=gene-SNF32_00740;Dbxref=NCBI_GP:MDY4306533.1;Name=MDY4306533.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00740;product=hypothetical protein;protein_id=MDY4306533.1;transl_table=11 JAXGFV010000001.1 Genbank gene 131279 132010 . - . ID=gene-SNF32_00745;Name=SNF32_00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00745 JAXGFV010000001.1 Protein Homology CDS 131279 132010 . - 0 ID=cds-MDY4306534.1;Parent=gene-SNF32_00745;Dbxref=NCBI_GP:MDY4306534.1;Name=MDY4306534.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015288.3;locus_tag=SNF32_00745;product=ETX/MTX2 family pore-forming toxin;protein_id=MDY4306534.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 132238 133139 . - . ID=gene-SNF32_00750;Name=SNF32_00750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00750;pseudo=true JAXGFV010000001.1 Protein Homology CDS 132238 133139 . - 0 ID=cds-SNF32_00750;Parent=gene-SNF32_00750;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735506.1;locus_tag=SNF32_00750;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 133136 133836 . - . ID=gene-SNF32_00755;Name=SNF32_00755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00755;pseudo=true JAXGFV010000001.1 Protein Homology CDS 133136 133836 . - 0 ID=cds-SNF32_00755;Parent=gene-SNF32_00755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722832.1;locus_tag=SNF32_00755;product=carbonic anhydrase family protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 133862 134516 . - . ID=gene-SNF32_00760;Name=SNF32_00760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00760;pseudo=true JAXGFV010000001.1 Protein Homology CDS 133862 134516 . - 0 ID=cds-SNF32_00760;Parent=gene-SNF32_00760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010751014.1;locus_tag=SNF32_00760;product=YfbR-like 5'-deoxynucleotidase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 134712 135342 . - . ID=gene-SNF32_00765;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=pseudogene;locus_tag=SNF32_00765;pseudo=true JAXGFV010000001.1 Protein Homology CDS 134712 135342 . - 0 ID=cds-SNF32_00765;Parent=gene-SNF32_00765;Note=frameshifted;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015694878.1;locus_tag=SNF32_00765;product=orotate phosphoribosyltransferase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 135346 136056 . - . ID=gene-SNF32_00770;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=SNF32_00770 JAXGFV010000001.1 Protein Homology CDS 135346 136056 . - 0 ID=cds-MDY4306535.1;Parent=gene-SNF32_00770;Dbxref=NCBI_GP:MDY4306535.1;Name=MDY4306535.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010751016.1;locus_tag=SNF32_00770;product=orotidine-5'-phosphate decarboxylase;protein_id=MDY4306535.1;transl_table=11 JAXGFV010000001.1 Genbank gene 136053 136982 . - . ID=gene-SNF32_00775;Name=SNF32_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00775 JAXGFV010000001.1 Protein Homology CDS 136053 136982 . - 0 ID=cds-MDY4306536.1;Parent=gene-SNF32_00775;Dbxref=NCBI_GP:MDY4306536.1;Name=MDY4306536.1;Ontology_term=GO:0006221,GO:0004152;gbkey=CDS;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723950.1;locus_tag=SNF32_00775;product=dihydroorotate dehydrogenase;protein_id=MDY4306536.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 136979 137753 . - . ID=gene-SNF32_00780;Name=SNF32_00780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00780;pseudo=true JAXGFV010000001.1 Protein Homology CDS 136979 137753 . - 0 ID=cds-SNF32_00780;Parent=gene-SNF32_00780;Note=frameshifted;Ontology_term=GO:0006221,GO:0016491,GO:0050660,GO:0051537;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002337699.1;locus_tag=SNF32_00780;product=dihydroorotate dehydrogenase electron transfer subunit;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 137839 141024 . - . ID=gene-SNF32_00785;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=SNF32_00785 JAXGFV010000001.1 Protein Homology CDS 137839 141024 . - 0 ID=cds-MDY4306537.1;Parent=gene-SNF32_00785;Dbxref=NCBI_GP:MDY4306537.1;Name=MDY4306537.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016627962.1;locus_tag=SNF32_00785;product=carbamoyl-phosphate synthase large subunit;protein_id=MDY4306537.1;transl_table=11 JAXGFV010000001.1 Genbank gene 141024 142103 . - . ID=gene-SNF32_00790;Name=SNF32_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00790 JAXGFV010000001.1 Protein Homology CDS 141024 142103 . - 0 ID=cds-MDY4306538.1;Parent=gene-SNF32_00790;Dbxref=NCBI_GP:MDY4306538.1;Name=MDY4306538.1;Ontology_term=GO:0006541,GO:0004088;gbkey=CDS;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002345088.1;locus_tag=SNF32_00790;product=carbamoyl phosphate synthase small subunit;protein_id=MDY4306538.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 142108 143386 . - . ID=gene-SNF32_00795;Name=SNF32_00795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00795;pseudo=true JAXGFV010000001.1 Protein Homology CDS 142108 143386 . - 0 ID=cds-SNF32_00795;Parent=gene-SNF32_00795;Note=frameshifted;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002339315.1;locus_tag=SNF32_00795;product=dihydroorotase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 143407 144330 . - . ID=gene-SNF32_00800;Name=SNF32_00800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00800;pseudo=true JAXGFV010000001.1 Protein Homology CDS 143407 144330 . - 0 ID=cds-SNF32_00800;Parent=gene-SNF32_00800;Note=frameshifted;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002322463.1;locus_tag=SNF32_00800;product=aspartate carbamoyltransferase catalytic subunit;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 144343 145592 . - . ID=gene-SNF32_00805;Name=SNF32_00805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00805;pseudo=true JAXGFV010000001.1 Protein Homology CDS 144343 145592 . - 0 ID=cds-SNF32_00805;Parent=gene-SNF32_00805;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735517.1;locus_tag=SNF32_00805;product=solute carrier family 23 protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 145639 146176 . - . ID=gene-SNF32_00810;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=pseudogene;locus_tag=SNF32_00810;pseudo=true JAXGFV010000001.1 Protein Homology CDS 145639 146176 . - 0 ID=cds-SNF32_00810;Parent=gene-SNF32_00810;Note=frameshifted;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010751024.1;locus_tag=SNF32_00810;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 146233 146355 . + . ID=gene-SNF32_00815;Name=SNF32_00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00815 JAXGFV010000001.1 GeneMarkS-2+ CDS 146233 146355 . + 0 ID=cds-MDY4306539.1;Parent=gene-SNF32_00815;Dbxref=NCBI_GP:MDY4306539.1;Name=MDY4306539.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00815;product=hypothetical protein;protein_id=MDY4306539.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 146415 147322 . - . ID=gene-SNF32_00820;Name=SNF32_00820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00820;pseudo=true JAXGFV010000001.1 Protein Homology CDS 146415 147322 . - 0 ID=cds-SNF32_00820;Parent=gene-SNF32_00820;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002349590.1;locus_tag=SNF32_00820;product=RluA family pseudouridine synthase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 147273 147781 . - . ID=gene-SNF32_00825;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=pseudogene;locus_tag=SNF32_00825;pseudo=true JAXGFV010000001.1 Protein Homology CDS 147273 147781 . - 0 ID=cds-SNF32_00825;Parent=gene-SNF32_00825;Note=frameshifted;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013774055.1;locus_tag=SNF32_00825;product=signal peptidase II;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 147786 148432 . - . ID=gene-SNF32_00830;Name=SNF32_00830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00830;pseudo=true JAXGFV010000001.1 Protein Homology CDS 147786 148432 . - 0 ID=cds-SNF32_00830;Parent=gene-SNF32_00830;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002376865.1;locus_tag=SNF32_00830;product=CBS domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 148469 148850 . - . ID=gene-SNF32_00835;Name=SNF32_00835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00835;pseudo=true JAXGFV010000001.1 Protein Homology CDS 148469 148850 . - 0 ID=cds-SNF32_00835;Parent=gene-SNF32_00835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723661.1;locus_tag=SNF32_00835;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 149078 149407 . - . ID=gene-SNF32_00840;Name=SNF32_00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00840 JAXGFV010000001.1 Protein Homology CDS 149078 149407 . - 0 ID=cds-MDY4306540.1;Parent=gene-SNF32_00840;Dbxref=NCBI_GP:MDY4306540.1;Name=MDY4306540.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042802.1;locus_tag=SNF32_00840;product=DUF6773 family protein;protein_id=MDY4306540.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 149429 149617 . - . ID=gene-SNF32_00845;Name=SNF32_00845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00845;pseudo=true JAXGFV010000001.1 Protein Homology CDS 149429 149617 . - 0 ID=cds-SNF32_00845;Parent=gene-SNF32_00845;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013670190.1;locus_tag=SNF32_00845;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 150131 150805 . - . ID=gene-SNF32_00850;Name=SNF32_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00850 JAXGFV010000001.1 GeneMarkS-2+ CDS 150131 150805 . - 0 ID=cds-MDY4306541.1;Parent=gene-SNF32_00850;Dbxref=NCBI_GP:MDY4306541.1;Name=MDY4306541.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00850;product=hypothetical protein;protein_id=MDY4306541.1;transl_table=11 JAXGFV010000001.1 Genbank gene 150792 151031 . - . ID=gene-SNF32_00855;Name=SNF32_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00855 JAXGFV010000001.1 GeneMarkS-2+ CDS 150792 151031 . - 0 ID=cds-MDY4306542.1;Parent=gene-SNF32_00855;Dbxref=NCBI_GP:MDY4306542.1;Name=MDY4306542.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00855;product=hypothetical protein;protein_id=MDY4306542.1;transl_table=11 JAXGFV010000001.1 Genbank gene 151239 151808 . - . ID=gene-SNF32_00860;Name=SNF32_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00860 JAXGFV010000001.1 GeneMarkS-2+ CDS 151239 151808 . - 0 ID=cds-MDY4306543.1;Parent=gene-SNF32_00860;Dbxref=NCBI_GP:MDY4306543.1;Name=MDY4306543.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00860;product=hypothetical protein;protein_id=MDY4306543.1;transl_table=11 JAXGFV010000001.1 Genbank gene 152222 153157 . - . ID=gene-SNF32_00865;Name=SNF32_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00865 JAXGFV010000001.1 GeneMarkS-2+ CDS 152222 153157 . - 0 ID=cds-MDY4306544.1;Parent=gene-SNF32_00865;Dbxref=NCBI_GP:MDY4306544.1;Name=MDY4306544.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00865;product=hypothetical protein;protein_id=MDY4306544.1;transl_table=11 JAXGFV010000001.1 Genbank gene 153244 154023 . - . ID=gene-SNF32_00870;Name=SNF32_00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00870 JAXGFV010000001.1 GeneMarkS-2+ CDS 153244 154023 . - 0 ID=cds-MDY4306545.1;Parent=gene-SNF32_00870;Dbxref=NCBI_GP:MDY4306545.1;Name=MDY4306545.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00870;product=hypothetical protein;protein_id=MDY4306545.1;transl_table=11 JAXGFV010000001.1 Genbank gene 154029 154394 . - . ID=gene-SNF32_00875;Name=SNF32_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00875 JAXGFV010000001.1 GeneMarkS-2+ CDS 154029 154394 . - 0 ID=cds-MDY4306546.1;Parent=gene-SNF32_00875;Dbxref=NCBI_GP:MDY4306546.1;Name=MDY4306546.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00875;product=hypothetical protein;protein_id=MDY4306546.1;transl_table=11 JAXGFV010000001.1 Genbank gene 154751 155338 . - . ID=gene-SNF32_00880;Name=SNF32_00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00880 JAXGFV010000001.1 GeneMarkS-2+ CDS 154751 155338 . - 0 ID=cds-MDY4306547.1;Parent=gene-SNF32_00880;Dbxref=NCBI_GP:MDY4306547.1;Name=MDY4306547.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00880;product=hypothetical protein;protein_id=MDY4306547.1;transl_table=11 JAXGFV010000001.1 Genbank gene 155317 155502 . - . ID=gene-SNF32_00885;Name=SNF32_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00885 JAXGFV010000001.1 GeneMarkS-2+ CDS 155317 155502 . - 0 ID=cds-MDY4306548.1;Parent=gene-SNF32_00885;Dbxref=NCBI_GP:MDY4306548.1;Name=MDY4306548.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00885;product=hypothetical protein;protein_id=MDY4306548.1;transl_table=11 JAXGFV010000001.1 Genbank gene 155505 155693 . - . ID=gene-SNF32_00890;Name=SNF32_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00890 JAXGFV010000001.1 GeneMarkS-2+ CDS 155505 155693 . - 0 ID=cds-MDY4306549.1;Parent=gene-SNF32_00890;Dbxref=NCBI_GP:MDY4306549.1;Name=MDY4306549.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00890;product=hypothetical protein;protein_id=MDY4306549.1;transl_table=11 JAXGFV010000001.1 Genbank gene 155723 156367 . - . ID=gene-SNF32_00895;Name=SNF32_00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00895 JAXGFV010000001.1 GeneMarkS-2+ CDS 155723 156367 . - 0 ID=cds-MDY4306550.1;Parent=gene-SNF32_00895;Dbxref=NCBI_GP:MDY4306550.1;Name=MDY4306550.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00895;product=hypothetical protein;protein_id=MDY4306550.1;transl_table=11 JAXGFV010000001.1 Genbank gene 156400 156924 . - . ID=gene-SNF32_00900;Name=SNF32_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00900 JAXGFV010000001.1 GeneMarkS-2+ CDS 156400 156924 . - 0 ID=cds-MDY4306551.1;Parent=gene-SNF32_00900;Dbxref=NCBI_GP:MDY4306551.1;Name=MDY4306551.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00900;product=hypothetical protein;protein_id=MDY4306551.1;transl_table=11 JAXGFV010000001.1 Genbank gene 157243 157443 . - . ID=gene-SNF32_00905;Name=SNF32_00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00905 JAXGFV010000001.1 GeneMarkS-2+ CDS 157243 157443 . - 0 ID=cds-MDY4306552.1;Parent=gene-SNF32_00905;Dbxref=NCBI_GP:MDY4306552.1;Name=MDY4306552.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00905;product=hypothetical protein;protein_id=MDY4306552.1;transl_table=11 JAXGFV010000001.1 Genbank gene 157448 157693 . - . ID=gene-SNF32_00910;Name=SNF32_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00910 JAXGFV010000001.1 GeneMarkS-2+ CDS 157448 157693 . - 0 ID=cds-MDY4306553.1;Parent=gene-SNF32_00910;Dbxref=NCBI_GP:MDY4306553.1;Name=MDY4306553.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00910;product=hypothetical protein;protein_id=MDY4306553.1;transl_table=11 JAXGFV010000001.1 Genbank gene 157813 157980 . - . ID=gene-SNF32_00915;Name=SNF32_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00915 JAXGFV010000001.1 GeneMarkS-2+ CDS 157813 157980 . - 0 ID=cds-MDY4306554.1;Parent=gene-SNF32_00915;Dbxref=NCBI_GP:MDY4306554.1;Name=MDY4306554.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00915;product=hypothetical protein;protein_id=MDY4306554.1;transl_table=11 JAXGFV010000001.1 Genbank gene 157977 158183 . - . ID=gene-SNF32_00920;Name=SNF32_00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00920 JAXGFV010000001.1 GeneMarkS-2+ CDS 157977 158183 . - 0 ID=cds-MDY4306555.1;Parent=gene-SNF32_00920;Dbxref=NCBI_GP:MDY4306555.1;Name=MDY4306555.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00920;product=hypothetical protein;protein_id=MDY4306555.1;transl_table=11 JAXGFV010000001.1 Genbank gene 158261 158479 . - . ID=gene-SNF32_00925;Name=SNF32_00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00925 JAXGFV010000001.1 GeneMarkS-2+ CDS 158261 158479 . - 0 ID=cds-MDY4306556.1;Parent=gene-SNF32_00925;Dbxref=NCBI_GP:MDY4306556.1;Name=MDY4306556.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00925;product=hypothetical protein;protein_id=MDY4306556.1;transl_table=11 JAXGFV010000001.1 Genbank gene 158580 158996 . - . ID=gene-SNF32_00930;Name=SNF32_00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00930 JAXGFV010000001.1 GeneMarkS-2+ CDS 158580 158996 . - 0 ID=cds-MDY4306557.1;Parent=gene-SNF32_00930;Dbxref=NCBI_GP:MDY4306557.1;Name=MDY4306557.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00930;product=hypothetical protein;protein_id=MDY4306557.1;transl_table=11 JAXGFV010000001.1 Genbank gene 158993 159433 . - . ID=gene-SNF32_00935;Name=SNF32_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00935 JAXGFV010000001.1 GeneMarkS-2+ CDS 158993 159433 . - 0 ID=cds-MDY4306558.1;Parent=gene-SNF32_00935;Dbxref=NCBI_GP:MDY4306558.1;Name=MDY4306558.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00935;product=hypothetical protein;protein_id=MDY4306558.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 159685 161350 . - . ID=gene-SNF32_00940;Name=SNF32_00940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00940;pseudo=true JAXGFV010000001.1 Protein Homology CDS 159685 161350 . - 0 ID=cds-SNF32_00940;Parent=gene-SNF32_00940;Note=frameshifted;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008268812.1;locus_tag=SNF32_00940;product=formate--tetrahydrofolate ligase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 161529 161782 . + . ID=gene-SNF32_00945;Name=SNF32_00945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00945;pseudo=true JAXGFV010000001.1 Protein Homology CDS 161529 161782 . + 0 ID=cds-SNF32_00945;Parent=gene-SNF32_00945;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005879125.1;locus_tag=SNF32_00945;product=cold shock domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 161846 162288 . - . ID=gene-SNF32_00950;Name=SNF32_00950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00950;pseudo=true JAXGFV010000001.1 Protein Homology CDS 161846 162288 . - 0 ID=cds-SNF32_00950;Parent=gene-SNF32_00950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724340.1;locus_tag=SNF32_00950;product=EbsA family protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 162357 162752 . + . ID=gene-SNF32_00955;Name=SNF32_00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00955 JAXGFV010000001.1 Protein Homology CDS 162357 162752 . + 0 ID=cds-MDY4306559.1;Parent=gene-SNF32_00955;Dbxref=NCBI_GP:MDY4306559.1;Name=MDY4306559.1;Ontology_term=GO:0003677,GO:0003723;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724341.1;locus_tag=SNF32_00955;product=ribonuclease HI family protein;protein_id=MDY4306559.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 163681 164764 . - . ID=gene-SNF32_00960;Name=SNF32_00960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00960;pseudo=true JAXGFV010000001.1 Protein Homology CDS 163681 164764 . - 0 ID=cds-SNF32_00960;Parent=gene-SNF32_00960;Note=frameshifted;Ontology_term=GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737526.1;locus_tag=SNF32_00960;product=cation diffusion facilitator family transporter;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 164856 165452 . - . ID=gene-SNF32_00965;Name=SNF32_00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00965 JAXGFV010000001.1 Protein Homology CDS 164856 165452 . - 0 ID=cds-MDY4306560.1;Parent=gene-SNF32_00965;Dbxref=NCBI_GP:MDY4306560.1;Name=MDY4306560.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723497.1;locus_tag=SNF32_00965;product=ECF transporter S component;protein_id=MDY4306560.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 165620 168255 . - . ID=gene-SNF32_00970;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=pseudogene;locus_tag=SNF32_00970;pseudo=true JAXGFV010000001.1 Protein Homology CDS 165620 168255 . - 0 ID=cds-SNF32_00970;Parent=gene-SNF32_00970;Note=frameshifted;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002349591.1;locus_tag=SNF32_00970;product=alanine--tRNA ligase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 168613 169041 . + . ID=gene-SNF32_00975;Name=SNF32_00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00975 JAXGFV010000001.1 Protein Homology CDS 168613 169041 . + 0 ID=cds-MDY4306561.1;Parent=gene-SNF32_00975;Dbxref=NCBI_GP:MDY4306561.1;Name=MDY4306561.1;Ontology_term=GO:0008080,GO:0016747;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723499.1;locus_tag=SNF32_00975;product=GNAT family N-acetyltransferase;protein_id=MDY4306561.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 169135 170491 . - . ID=gene-SNF32_00980;Name=SNF32_00980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_00980;pseudo=true JAXGFV010000001.1 Protein Homology CDS 169135 170491 . - 0 ID=cds-SNF32_00980;Parent=gene-SNF32_00980;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002309341.1;locus_tag=SNF32_00980;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 170567 170773 . - . ID=gene-SNF32_00985;Name=SNF32_00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00985 JAXGFV010000001.1 GeneMarkS-2+ CDS 170567 170773 . - 0 ID=cds-MDY4306562.1;Parent=gene-SNF32_00985;Dbxref=NCBI_GP:MDY4306562.1;Name=MDY4306562.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00985;product=hypothetical protein;protein_id=MDY4306562.1;transl_table=11 JAXGFV010000001.1 Genbank gene 170779 171384 . - . ID=gene-SNF32_00990;Name=SNF32_00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00990 JAXGFV010000001.1 Protein Homology CDS 170779 171384 . - 0 ID=cds-MDY4306563.1;Parent=gene-SNF32_00990;Dbxref=NCBI_GP:MDY4306563.1;Name=MDY4306563.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018028.3;locus_tag=SNF32_00990;product=RDD family protein;protein_id=MDY4306563.1;transl_table=11 JAXGFV010000001.1 Genbank gene 171374 171496 . - . ID=gene-SNF32_00995;Name=SNF32_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_00995 JAXGFV010000001.1 GeneMarkS-2+ CDS 171374 171496 . - 0 ID=cds-MDY4306564.1;Parent=gene-SNF32_00995;Dbxref=NCBI_GP:MDY4306564.1;Name=MDY4306564.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_00995;product=hypothetical protein;protein_id=MDY4306564.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 171836 172152 . + . ID=gene-SNF32_01000;Name=SNF32_01000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01000;pseudo=true JAXGFV010000001.1 Protein Homology CDS 171836 172152 . + 0 ID=cds-SNF32_01000;Parent=gene-SNF32_01000;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002289192.1;locus_tag=SNF32_01000;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 172334 173008 . - . ID=gene-SNF32_01005;Name=SNF32_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01005 JAXGFV010000001.1 Protein Homology CDS 172334 173008 . - 0 ID=cds-MDY4306565.1;Parent=gene-SNF32_01005;Dbxref=NCBI_GP:MDY4306565.1;Name=MDY4306565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723503.1;locus_tag=SNF32_01005;product=HD domain-containing protein;protein_id=MDY4306565.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 173039 174535 . - . ID=gene-SNF32_01010;Name=SNF32_01010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01010;pseudo=true JAXGFV010000001.1 Protein Homology CDS 173039 174535 . - 0 ID=cds-SNF32_01010;Parent=gene-SNF32_01010;Note=frameshifted;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735542.1;locus_tag=SNF32_01010;product=carboxypeptidase M32;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 174681 174962 . - . ID=gene-SNF32_01015;Name=SNF32_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01015 JAXGFV010000001.1 Protein Homology CDS 174681 174962 . - 0 ID=cds-MDY4306566.1;Parent=gene-SNF32_01015;Dbxref=NCBI_GP:MDY4306566.1;Name=MDY4306566.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016178.3;locus_tag=SNF32_01015;product=ASCH domain-containing protein;protein_id=MDY4306566.1;transl_table=11 JAXGFV010000001.1 Genbank gene 174938 175060 . - . ID=gene-SNF32_01020;Name=SNF32_01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01020 JAXGFV010000001.1 GeneMarkS-2+ CDS 174938 175060 . - 0 ID=cds-MDY4306567.1;Parent=gene-SNF32_01020;Dbxref=NCBI_GP:MDY4306567.1;Name=MDY4306567.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_01020;product=hypothetical protein;protein_id=MDY4306567.1;transl_table=11 JAXGFV010000001.1 Genbank gene 175142 176311 . - . ID=gene-SNF32_01025;Name=SNF32_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01025 JAXGFV010000001.1 Protein Homology CDS 175142 176311 . - 0 ID=cds-MDY4306568.1;Parent=gene-SNF32_01025;Dbxref=NCBI_GP:MDY4306568.1;Name=MDY4306568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002376892.1;locus_tag=SNF32_01025;product=class I SAM-dependent RNA methyltransferase;protein_id=MDY4306568.1;transl_table=11 JAXGFV010000001.1 Genbank gene 176608 176978 . - . ID=gene-SNF32_01030;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=SNF32_01030 JAXGFV010000001.1 cmsearch RNase_P_RNA 176608 176978 . - . ID=rna-SNF32_01030;Parent=gene-SNF32_01030;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=SNF32_01030;product=RNase P RNA component class B JAXGFV010000001.1 cmsearch exon 176608 176978 . - . ID=exon-SNF32_01030-1;Parent=rna-SNF32_01030;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=SNF32_01030;product=RNase P RNA component class B JAXGFV010000001.1 Genbank pseudogene 176997 177409 . - . ID=gene-SNF32_01035;Name=gpsB;gbkey=Gene;gene=gpsB;gene_biotype=pseudogene;locus_tag=SNF32_01035;pseudo=true JAXGFV010000001.1 Protein Homology CDS 176997 177409 . - 0 ID=cds-SNF32_01035;Parent=gene-SNF32_01035;Note=frameshifted;gbkey=CDS;gene=gpsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002295835.1;locus_tag=SNF32_01035;product=cell division regulator GpsB;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 177498 178033 . - . ID=gene-SNF32_01040;Name=SNF32_01040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01040;pseudo=true JAXGFV010000001.1 Protein Homology CDS 177498 178033 . - 0 ID=cds-SNF32_01040;Parent=gene-SNF32_01040;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002327933.1;locus_tag=SNF32_01040;product=DUF1273 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 178097 178736 . + . ID=gene-SNF32_01045;Name=recU;gbkey=Gene;gene=recU;gene_biotype=pseudogene;locus_tag=SNF32_01045;pseudo=true JAXGFV010000001.1 Protein Homology CDS 178097 178736 . + 0 ID=cds-SNF32_01045;Parent=gene-SNF32_01045;Note=frameshifted;Ontology_term=GO:0006281,GO:0003676,GO:0004518;gbkey=CDS;gene=recU;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735547.1;locus_tag=SNF32_01045;product=Holliday junction resolvase RecU;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 178726 181112 . + . ID=gene-SNF32_01050;Name=SNF32_01050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01050;pseudo=true JAXGFV010000001.1 Protein Homology CDS 178726 181112 . + 0 ID=cds-SNF32_01050;Parent=gene-SNF32_01050;Note=frameshifted;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724059.1;locus_tag=SNF32_01050;product=PBP1A family penicillin-binding protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 181274 181626 . + . ID=gene-SNF32_01055;Name=SNF32_01055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01055;pseudo=true JAXGFV010000001.1 Protein Homology CDS 181274 181626 . + 0 ID=cds-SNF32_01055;Parent=gene-SNF32_01055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002409866.1;locus_tag=SNF32_01055;product=VOC family protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 181708 183062 . - . ID=gene-SNF32_01060;Name=SNF32_01060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01060;pseudo=true JAXGFV010000001.1 Protein Homology CDS 181708 183062 . - 0 ID=cds-SNF32_01060;Parent=gene-SNF32_01060;Note=frameshifted;Ontology_term=GO:0015379,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=potassium:chloride symporter activity|0015379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010738846.1;locus_tag=SNF32_01060;product=TrkH family potassium uptake protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 183426 184058 . - . ID=gene-SNF32_01065;Name=SNF32_01065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01065;pseudo=true JAXGFV010000001.1 Protein Homology CDS 183426 184058 . - 0 ID=cds-SNF32_01065;Parent=gene-SNF32_01065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002346470.1;locus_tag=SNF32_01065;product=V-type ATP synthase subunit D;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 184066 185442 . - . ID=gene-SNF32_01070;Name=SNF32_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01070 JAXGFV010000001.1 Protein Homology CDS 184066 185442 . - 0 ID=cds-MDY4306569.1;Parent=gene-SNF32_01070;Dbxref=NCBI_GP:MDY4306569.1;Name=MDY4306569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629451.1;locus_tag=SNF32_01070;product=V-type ATP synthase subunit B;protein_id=MDY4306569.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 185435 187213 . - . ID=gene-SNF32_01075;Name=SNF32_01075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01075;pseudo=true JAXGFV010000001.1 Protein Homology CDS 185435 187213 . - 0 ID=cds-SNF32_01075;Parent=gene-SNF32_01075;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002320263.1;locus_tag=SNF32_01075;product=V-type ATP synthase subunit A;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 187233 187543 . - . ID=gene-SNF32_01080;Name=SNF32_01080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01080;pseudo=true JAXGFV010000001.1 Protein Homology CDS 187233 187543 . - 0 ID=cds-SNF32_01080;Parent=gene-SNF32_01080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007209277.1;locus_tag=SNF32_01080;product=V-type ATP synthase subunit F;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 187533 188519 . - . ID=gene-SNF32_01085;Name=SNF32_01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01085 JAXGFV010000001.1 Protein Homology CDS 187533 188519 . - 0 ID=cds-MDY4306570.1;Parent=gene-SNF32_01085;Dbxref=NCBI_GP:MDY4306570.1;Name=MDY4306570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002308529.1;locus_tag=SNF32_01085;product=V-type ATPase subunit;protein_id=MDY4306570.1;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 188534 189117 . - . ID=gene-SNF32_01090;Name=SNF32_01090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01090;pseudo=true JAXGFV010000001.1 Protein Homology CDS 188534 189117 . - 0 ID=cds-SNF32_01090;Parent=gene-SNF32_01090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002295097.1;locus_tag=SNF32_01090;product=ATPase V;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 189134 189602 . - . ID=gene-SNF32_01095;Name=SNF32_01095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01095;pseudo=true JAXGFV010000001.1 Protein Homology CDS 189134 189602 . - 0 ID=cds-SNF32_01095;Parent=gene-SNF32_01095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010738015.1;locus_tag=SNF32_01095;product=V-type ATP synthase subunit K;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 189625 191618 . - . ID=gene-SNF32_01100;Name=SNF32_01100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01100;pseudo=true JAXGFV010000001.1 Protein Homology CDS 189625 191618 . - 0 ID=cds-SNF32_01100;Parent=gene-SNF32_01100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010738016.1;locus_tag=SNF32_01100;product=V-type ATP synthase subunit I;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank gene 191723 192025 . - . ID=gene-SNF32_01105;Name=SNF32_01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01105 JAXGFV010000001.1 GeneMarkS-2+ CDS 191723 192025 . - 0 ID=cds-MDY4306571.1;Parent=gene-SNF32_01105;Dbxref=NCBI_GP:MDY4306571.1;Name=MDY4306571.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_01105;product=hypothetical protein;protein_id=MDY4306571.1;transl_table=11 JAXGFV010000001.1 cmsearch sequence_feature 192033 192080 . - . ID=id-JAXGFV010000001.1:192033..192080;Dbxref=RFAM:RF03071;Note=sodium ion sensor (DUF1646 type)%3B this cis-regulatory element may regulate processes involved in with the transportation of sodium ions;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.4 JAXGFV010000001.1 Genbank pseudogene 192307 193013 . + . ID=gene-SNF32_01110;Name=SNF32_01110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01110;pseudo=true JAXGFV010000001.1 Protein Homology CDS 192307 193013 . + 0 ID=cds-SNF32_01110;Parent=gene-SNF32_01110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010769214.1;locus_tag=SNF32_01110;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 193110 195003 . - . ID=gene-SNF32_01115;Name=SNF32_01115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01115;pseudo=true JAXGFV010000001.1 Protein Homology CDS 193110 195003 . - 0 ID=cds-SNF32_01115;Parent=gene-SNF32_01115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734839.1;locus_tag=SNF32_01115;product=fructose-1%2C6-bisphosphatase;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 195256 196517 . - . ID=gene-SNF32_01120;Name=SNF32_01120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01120;pseudo=true JAXGFV010000001.1 Protein Homology CDS 195256 196517 . - 0 ID=cds-SNF32_01120;Parent=gene-SNF32_01120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734838.1;locus_tag=SNF32_01120;product=ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000001.1 Genbank pseudogene 196510 197406 . - . ID=gene-SNF32_01125;Name=SNF32_01125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01125;pseudo=true JAXGFV010000001.1 Protein Homology CDS 196510 197406 . - 0 ID=cds-SNF32_01125;Parent=gene-SNF32_01125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722434.1;locus_tag=SNF32_01125;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000010.1 1 71671 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000010.1 Genbank region 1 71671 . + . ID=JAXGFV010000010.1:1..71671;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000010.1 Genbank pseudogene 391 1239 . + . ID=gene-SNF32_06585;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=pseudogene;locus_tag=SNF32_06585;pseudo=true JAXGFV010000010.1 Protein Homology CDS 391 1239 . + 0 ID=cds-SNF32_06585;Parent=gene-SNF32_06585;Note=frameshifted;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002286428.1;locus_tag=SNF32_06585;product=dTDP-4-dehydrorhamnose reductase;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 1286 3294 . + . ID=gene-SNF32_06590;Name=SNF32_06590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06590;pseudo=true JAXGFV010000010.1 Protein Homology CDS 1286 3294 . + 0 ID=cds-SNF32_06590;Parent=gene-SNF32_06590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722598.1;locus_tag=SNF32_06590;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 3411 4636 . + . ID=gene-SNF32_06595;Name=SNF32_06595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06595;pseudo=true JAXGFV010000010.1 Protein Homology CDS 3411 4636 . + 0 ID=cds-SNF32_06595;Parent=gene-SNF32_06595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722597.1;locus_tag=SNF32_06595;product=EpaQ family protein;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 4996 5777 . + . ID=gene-SNF32_06600;Name=SNF32_06600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06600;pseudo=true JAXGFV010000010.1 Protein Homology CDS 4996 5777 . + 0 ID=cds-SNF32_06600;Parent=gene-SNF32_06600;Note=frameshifted;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF013245.3;locus_tag=SNF32_06600;product=ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 5789 7004 . + . ID=gene-SNF32_06605;Name=SNF32_06605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06605;pseudo=true JAXGFV010000010.1 Protein Homology CDS 5789 7004 . + 0 ID=cds-SNF32_06605;Parent=gene-SNF32_06605;Note=frameshifted%3B internal stop;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002318607.1;locus_tag=SNF32_06605;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 6994 8574 . + . ID=gene-SNF32_06610;Name=SNF32_06610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06610;pseudo=true JAXGFV010000010.1 Protein Homology CDS 6994 8574 . + 0 ID=cds-SNF32_06610;Parent=gene-SNF32_06610;Note=frameshifted;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328620.1;locus_tag=SNF32_06610;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 8620 10736 . + . ID=gene-SNF32_06615;Name=SNF32_06615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06615;pseudo=true JAXGFV010000010.1 Protein Homology CDS 8620 10736 . + 0 ID=cds-SNF32_06615;Parent=gene-SNF32_06615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328200.1;locus_tag=SNF32_06615;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 10994 12332 . + . ID=gene-SNF32_06620;Name=SNF32_06620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06620;pseudo=true JAXGFV010000010.1 Protein Homology CDS 10994 12332 . + 0 ID=cds-SNF32_06620;Parent=gene-SNF32_06620;Note=frameshifted;Ontology_term=GO:0016740,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735935.1;locus_tag=SNF32_06620;product=sugar transferase;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank gene 12350 12652 . + . ID=gene-SNF32_06625;Name=SNF32_06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06625 JAXGFV010000010.1 Protein Homology CDS 12350 12652 . + 0 ID=cds-MDY4307154.1;Parent=gene-SNF32_06625;Dbxref=NCBI_GP:MDY4307154.1;Name=MDY4307154.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025025.3;locus_tag=SNF32_06625;product=glycosyltransferase family A protein;protein_id=MDY4307154.1;transl_table=11 JAXGFV010000010.1 Genbank gene 13079 13360 . + . ID=gene-SNF32_06630;Name=SNF32_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06630 JAXGFV010000010.1 GeneMarkS-2+ CDS 13079 13360 . + 0 ID=cds-MDY4307155.1;Parent=gene-SNF32_06630;Dbxref=NCBI_GP:MDY4307155.1;Name=MDY4307155.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06630;product=hypothetical protein;protein_id=MDY4307155.1;transl_table=11 JAXGFV010000010.1 Genbank gene 13430 13741 . + . ID=gene-SNF32_06635;Name=SNF32_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06635 JAXGFV010000010.1 Protein Homology CDS 13430 13741 . + 0 ID=cds-MDY4307156.1;Parent=gene-SNF32_06635;Dbxref=NCBI_GP:MDY4307156.1;Name=MDY4307156.1;Ontology_term=GO:0070567;gbkey=CDS;go_function=cytidylyltransferase activity|0070567||IEA;inference=COORDINATES: protein motif:HMM:NF013308.3;locus_tag=SNF32_06635;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=MDY4307156.1;transl_table=11 JAXGFV010000010.1 Genbank gene 14006 14254 . + . ID=gene-SNF32_06640;Name=SNF32_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06640 JAXGFV010000010.1 GeneMarkS-2+ CDS 14006 14254 . + 0 ID=cds-MDY4307157.1;Parent=gene-SNF32_06640;Dbxref=NCBI_GP:MDY4307157.1;Name=MDY4307157.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06640;product=hypothetical protein;protein_id=MDY4307157.1;transl_table=11 JAXGFV010000010.1 Genbank gene 14251 14550 . + . ID=gene-SNF32_06645;Name=SNF32_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06645 JAXGFV010000010.1 Protein Homology CDS 14251 14550 . + 0 ID=cds-MDY4307158.1;Parent=gene-SNF32_06645;Dbxref=NCBI_GP:MDY4307158.1;Name=MDY4307158.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF013530.3;locus_tag=SNF32_06645;product=NAD-dependent epimerase/dehydratase family protein;protein_id=MDY4307158.1;transl_table=11 JAXGFV010000010.1 Genbank gene 14559 14873 . + . ID=gene-SNF32_06650;Name=SNF32_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06650 JAXGFV010000010.1 Protein Homology CDS 14559 14873 . + 0 ID=cds-MDY4307159.1;Parent=gene-SNF32_06650;Dbxref=NCBI_GP:MDY4307159.1;Name=MDY4307159.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF027681.3;locus_tag=SNF32_06650;product=NAD-dependent epimerase/dehydratase family protein;protein_id=MDY4307159.1;transl_table=11 JAXGFV010000010.1 Genbank gene 14870 15214 . + . ID=gene-SNF32_06655;Name=SNF32_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06655 JAXGFV010000010.1 GeneMarkS-2+ CDS 14870 15214 . + 0 ID=cds-MDY4307160.1;Parent=gene-SNF32_06655;Dbxref=NCBI_GP:MDY4307160.1;Name=MDY4307160.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06655;product=NAD(P)-dependent oxidoreductase;protein_id=MDY4307160.1;transl_table=11 JAXGFV010000010.1 Genbank gene 15306 15458 . + . ID=gene-SNF32_06660;Name=SNF32_06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06660 JAXGFV010000010.1 GeneMarkS-2+ CDS 15306 15458 . + 0 ID=cds-MDY4307161.1;Parent=gene-SNF32_06660;Dbxref=NCBI_GP:MDY4307161.1;Name=MDY4307161.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06660;product=hypothetical protein;protein_id=MDY4307161.1;transl_table=11 JAXGFV010000010.1 Genbank gene 15792 15962 . + . ID=gene-SNF32_06665;Name=SNF32_06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06665 JAXGFV010000010.1 GeneMarkS-2+ CDS 15792 15962 . + 0 ID=cds-MDY4307162.1;Parent=gene-SNF32_06665;Dbxref=NCBI_GP:MDY4307162.1;Name=MDY4307162.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06665;product=hypothetical protein;protein_id=MDY4307162.1;transl_table=11 JAXGFV010000010.1 Genbank gene 16077 16193 . + . ID=gene-SNF32_06670;Name=SNF32_06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06670 JAXGFV010000010.1 Protein Homology CDS 16077 16193 . + 0 ID=cds-MDY4307163.1;Parent=gene-SNF32_06670;Dbxref=NCBI_GP:MDY4307163.1;Name=MDY4307163.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.3;locus_tag=SNF32_06670;product=hypothetical protein;protein_id=MDY4307163.1;transl_table=11 JAXGFV010000010.1 Genbank gene 16190 16351 . + . ID=gene-SNF32_06675;Name=SNF32_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06675 JAXGFV010000010.1 GeneMarkS-2+ CDS 16190 16351 . + 0 ID=cds-MDY4307164.1;Parent=gene-SNF32_06675;Dbxref=NCBI_GP:MDY4307164.1;Name=MDY4307164.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06675;product=hypothetical protein;protein_id=MDY4307164.1;transl_table=11 JAXGFV010000010.1 Genbank gene 16434 16649 . + . ID=gene-SNF32_06680;Name=SNF32_06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06680 JAXGFV010000010.1 Protein Homology CDS 16434 16649 . + 0 ID=cds-MDY4307165.1;Parent=gene-SNF32_06680;Dbxref=NCBI_GP:MDY4307165.1;Name=MDY4307165.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016852.3;locus_tag=SNF32_06680;product=LicD family protein;protein_id=MDY4307165.1;transl_table=11 JAXGFV010000010.1 Genbank gene 16784 17080 . + . ID=gene-SNF32_06685;Name=SNF32_06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06685 JAXGFV010000010.1 GeneMarkS-2+ CDS 16784 17080 . + 0 ID=cds-MDY4307166.1;Parent=gene-SNF32_06685;Dbxref=NCBI_GP:MDY4307166.1;Name=MDY4307166.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06685;product=hypothetical protein;protein_id=MDY4307166.1;transl_table=11 JAXGFV010000010.1 Genbank gene 17282 17542 . + . ID=gene-SNF32_06690;Name=SNF32_06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06690 JAXGFV010000010.1 Protein Homology CDS 17282 17542 . + 0 ID=cds-MDY4307167.1;Parent=gene-SNF32_06690;Dbxref=NCBI_GP:MDY4307167.1;Name=MDY4307167.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.3;locus_tag=SNF32_06690;product=glycosyltransferase;protein_id=MDY4307167.1;transl_table=11 JAXGFV010000010.1 Genbank gene 17849 18145 . + . ID=gene-SNF32_06695;Name=SNF32_06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06695 JAXGFV010000010.1 GeneMarkS-2+ CDS 17849 18145 . + 0 ID=cds-MDY4307168.1;Parent=gene-SNF32_06695;Dbxref=NCBI_GP:MDY4307168.1;Name=MDY4307168.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06695;product=hypothetical protein;protein_id=MDY4307168.1;transl_table=11 JAXGFV010000010.1 Genbank gene 18666 19076 . + . ID=gene-SNF32_06700;Name=SNF32_06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06700 JAXGFV010000010.1 GeneMarkS-2+ CDS 18666 19076 . + 0 ID=cds-MDY4307169.1;Parent=gene-SNF32_06700;Dbxref=NCBI_GP:MDY4307169.1;Name=MDY4307169.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06700;product=hypothetical protein;protein_id=MDY4307169.1;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 19273 19668 . + . ID=gene-SNF32_06705;Name=SNF32_06705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06705;pseudo=true JAXGFV010000010.1 Protein Homology CDS 19273 19668 . + 0 ID=cds-SNF32_06705;Parent=gene-SNF32_06705;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009058,GO:0005524,GO:0016874,GO:0016881;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016624780.1;locus_tag=SNF32_06705;product=cyanophycin synthetase;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 20007 20479 . + . ID=gene-SNF32_06710;Name=SNF32_06710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06710;pseudo=true JAXGFV010000010.1 Protein Homology CDS 20007 20479 . + 0 ID=cds-SNF32_06710;Parent=gene-SNF32_06710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735307.1;locus_tag=SNF32_06710;product=MaoC/PaaZ C-terminal domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 20481 21158 . + . ID=gene-SNF32_06715;Name=SNF32_06715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06715;pseudo=true JAXGFV010000010.1 Protein Homology CDS 20481 21158 . + 0 ID=cds-SNF32_06715;Parent=gene-SNF32_06715;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002300670.1;locus_tag=SNF32_06715;product=Bax inhibitor-1/YccA family protein;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 21466 24096 . + . ID=gene-SNF32_06720;Name=polA;gbkey=Gene;gene=polA;gene_biotype=pseudogene;locus_tag=SNF32_06720;pseudo=true JAXGFV010000010.1 Protein Homology CDS 21466 24096 . + 0 ID=cds-SNF32_06720;Parent=gene-SNF32_06720;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002345146.1;locus_tag=SNF32_06720;product=DNA polymerase I;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 24497 25331 . + . ID=gene-SNF32_06725;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=pseudogene;locus_tag=SNF32_06725;pseudo=true JAXGFV010000010.1 Protein Homology CDS 24497 25331 . + 0 ID=cds-SNF32_06725;Parent=gene-SNF32_06725;Note=frameshifted;Ontology_term=GO:0006281,GO:0008534,GO:0005737;gbkey=CDS;gene=mutM;go_component=cytoplasm|0005737||IEA;go_function=oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002390879.1;locus_tag=SNF32_06725;product=DNA-formamidopyrimidine glycosylase;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank gene 25304 25927 . + . ID=gene-SNF32_06730;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=SNF32_06730 JAXGFV010000010.1 Protein Homology CDS 25304 25927 . + 0 ID=cds-MDY4307170.1;Parent=gene-SNF32_06730;Dbxref=NCBI_GP:MDY4307170.1;Name=MDY4307170.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016922219.1;locus_tag=SNF32_06730;product=dephospho-CoA kinase;protein_id=MDY4307170.1;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 25981 26311 . + . ID=gene-SNF32_06735;Name=SNF32_06735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06735;pseudo=true JAXGFV010000010.1 Protein Homology CDS 25981 26311 . + 0 ID=cds-SNF32_06735;Parent=gene-SNF32_06735;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002338331.1;locus_tag=SNF32_06735;product=CsbD family protein;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank gene 26768 27253 . + . ID=gene-SNF32_06740;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=SNF32_06740 JAXGFV010000010.1 Protein Homology CDS 26768 27253 . + 0 ID=cds-MDY4307171.1;Parent=gene-SNF32_06740;Dbxref=NCBI_GP:MDY4307171.1;Name=MDY4307171.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735313.1;locus_tag=SNF32_06740;product=transcriptional regulator NrdR;protein_id=MDY4307171.1;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 27276 28651 . + . ID=gene-SNF32_06745;Name=SNF32_06745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06745;pseudo=true JAXGFV010000010.1 Protein Homology CDS 27276 28651 . + 0 ID=cds-SNF32_06745;Parent=gene-SNF32_06745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722655.1;locus_tag=SNF32_06745;product=DnaD domain protein;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 28651 29576 . + . ID=gene-SNF32_06750;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=pseudogene;locus_tag=SNF32_06750;pseudo=true JAXGFV010000010.1 Protein Homology CDS 28651 29576 . + 0 ID=cds-SNF32_06750;Parent=gene-SNF32_06750;Note=frameshifted;gbkey=CDS;gene=dnaI;inference=COORDINATES: protein motif:HMM:NF018969.3;locus_tag=SNF32_06750;product=primosomal protein DnaI;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 29760 30190 . + . ID=gene-SNF32_06755;Name=SNF32_06755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06755;pseudo=true JAXGFV010000010.1 Protein Homology CDS 29760 30190 . + 0 ID=cds-SNF32_06755;Parent=gene-SNF32_06755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735316.1;locus_tag=SNF32_06755;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 30409 31099 . + . ID=gene-SNF32_06760;Name=SNF32_06760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06760;pseudo=true JAXGFV010000010.1 Protein Homology CDS 30409 31099 . + 0 ID=cds-SNF32_06760;Parent=gene-SNF32_06760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735317.1;locus_tag=SNF32_06760;product=tRNA (adenine(22)-N(1))-methyltransferase TrmK;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 31101 32223 . + . ID=gene-SNF32_06765;Name=SNF32_06765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06765;pseudo=true JAXGFV010000010.1 Protein Homology CDS 31101 32223 . + 0 ID=cds-SNF32_06765;Parent=gene-SNF32_06765;Note=frameshifted;Ontology_term=GO:0008150,GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735318.1;locus_tag=SNF32_06765;product=Nif3-like dinuclear metal center hexameric protein;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 32239 33467 . + . ID=gene-SNF32_06770;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=pseudogene;locus_tag=SNF32_06770;pseudo=true JAXGFV010000010.1 Protein Homology CDS 32239 33467 . + 0 ID=cds-SNF32_06770;Parent=gene-SNF32_06770;Note=frameshifted;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737672.1;locus_tag=SNF32_06770;product=peptidase T;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 33667 34568 . + . ID=gene-SNF32_06775;Name=SNF32_06775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06775;pseudo=true JAXGFV010000010.1 Protein Homology CDS 33667 34568 . + 0 ID=cds-SNF32_06775;Parent=gene-SNF32_06775;Note=frameshifted;Ontology_term=GO:0008150,GO:0001727,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=lipid kinase activity|0001727||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005879848.1;locus_tag=SNF32_06775;product=YegS/Rv2252/BmrU family lipid kinase;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 34582 34844 . + . ID=gene-SNF32_06780;Name=SNF32_06780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06780;pseudo=true JAXGFV010000010.1 Protein Homology CDS 34582 34844 . + 0 ID=cds-SNF32_06780;Parent=gene-SNF32_06780;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002305633.1;locus_tag=SNF32_06780;product=DUF1294 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 34863 35914 . + . ID=gene-SNF32_06785;Name=SNF32_06785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06785;pseudo=true JAXGFV010000010.1 Protein Homology CDS 34863 35914 . + 0 ID=cds-SNF32_06785;Parent=gene-SNF32_06785;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002324936.1;locus_tag=SNF32_06785;product=lysylphosphatidylglycerol synthase transmembrane domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 36356 37089 . + . ID=gene-SNF32_06790;Name=SNF32_06790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06790;pseudo=true JAXGFV010000010.1 Protein Homology CDS 36356 37089 . + 0 ID=cds-SNF32_06790;Parent=gene-SNF32_06790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177386.1;locus_tag=SNF32_06790;product=GntR family transcriptional regulator%2C LSA1692 subfamily;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 37093 38392 . + . ID=gene-SNF32_06795;Name=SNF32_06795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06795;pseudo=true JAXGFV010000010.1 Protein Homology CDS 37093 38392 . + 0 ID=cds-SNF32_06795;Parent=gene-SNF32_06795;Note=frameshifted;Ontology_term=GO:0008270,GO:0016805;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,dipeptidase activity|0016805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010748747.1;locus_tag=SNF32_06795;product=Sapep family Mn(2+)-dependent dipeptidase;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 38559 39502 . + . ID=gene-SNF32_06800;Name=SNF32_06800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06800;pseudo=true JAXGFV010000010.1 Protein Homology CDS 38559 39502 . + 0 ID=cds-SNF32_06800;Parent=gene-SNF32_06800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008376063.1;locus_tag=SNF32_06800;product=N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank gene 39564 39896 . + . ID=gene-SNF32_06805;Name=SNF32_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06805 JAXGFV010000010.1 Protein Homology CDS 39564 39896 . + 0 ID=cds-MDY4307172.1;Parent=gene-SNF32_06805;Dbxref=NCBI_GP:MDY4307172.1;Name=MDY4307172.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735328.1;locus_tag=SNF32_06805;product=PTS sugar transporter subunit IIB;protein_id=MDY4307172.1;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 39960 41308 . + . ID=gene-SNF32_06810;Name=celB;gbkey=Gene;gene=celB;gene_biotype=pseudogene;locus_tag=SNF32_06810;pseudo=true JAXGFV010000010.1 Protein Homology CDS 39960 41308 . + 0 ID=cds-SNF32_06810;Parent=gene-SNF32_06810;Note=frameshifted;Ontology_term=GO:0009401,GO:0008982,GO:0019191;gbkey=CDS;gene=celB;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,cellobiose transmembrane transporter activity|0019191||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016615715.1;locus_tag=SNF32_06810;product=PTS cellobiose transporter subunit IIC;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 41298 41816 . + . ID=gene-SNF32_06815;Name=SNF32_06815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06815;pseudo=true JAXGFV010000010.1 Protein Homology CDS 41298 41816 . + 0 ID=cds-SNF32_06815;Parent=gene-SNF32_06815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735330.1;locus_tag=SNF32_06815;product=GrdB-related putative oxidoreductase;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 42207 44802 . + . ID=gene-SNF32_06820;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=pseudogene;locus_tag=SNF32_06820;pseudo=true JAXGFV010000010.1 Protein Homology CDS 42207 44802 . + 0 ID=cds-SNF32_06820;Parent=gene-SNF32_06820;Note=frameshifted;Ontology_term=GO:0006457,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735331.1;locus_tag=SNF32_06820;product=ATP-dependent chaperone ClpB;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank gene 45082 45441 . + . ID=gene-SNF32_06825;Name=SNF32_06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06825 JAXGFV010000010.1 Protein Homology CDS 45082 45441 . + 0 ID=cds-MDY4307173.1;Parent=gene-SNF32_06825;Dbxref=NCBI_GP:MDY4307173.1;Name=MDY4307173.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016901.3;locus_tag=SNF32_06825;product=helix-turn-helix domain-containing protein;protein_id=MDY4307173.1;transl_table=11 JAXGFV010000010.1 Genbank gene 45423 45554 . + . ID=gene-SNF32_06830;Name=SNF32_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06830 JAXGFV010000010.1 Protein Homology CDS 45423 45554 . + 0 ID=cds-MDY4307174.1;Parent=gene-SNF32_06830;Dbxref=NCBI_GP:MDY4307174.1;Name=MDY4307174.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016901.3;locus_tag=SNF32_06830;product=hypothetical protein;protein_id=MDY4307174.1;transl_table=11 JAXGFV010000010.1 Genbank gene 45588 46097 . + . ID=gene-SNF32_06835;Name=SNF32_06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06835 JAXGFV010000010.1 Protein Homology CDS 45588 46097 . + 0 ID=cds-MDY4307175.1;Parent=gene-SNF32_06835;Dbxref=NCBI_GP:MDY4307175.1;Name=MDY4307175.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF013070.3;locus_tag=SNF32_06835;product=PRD domain-containing protein;protein_id=MDY4307175.1;transl_table=11 JAXGFV010000010.1 Genbank gene 46094 46627 . + . ID=gene-SNF32_06840;Name=SNF32_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06840 JAXGFV010000010.1 Protein Homology CDS 46094 46627 . + 0 ID=cds-MDY4307176.1;Parent=gene-SNF32_06840;Dbxref=NCBI_GP:MDY4307176.1;Name=MDY4307176.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF013070.3;locus_tag=SNF32_06840;product=PRD domain-containing protein;protein_id=MDY4307176.1;transl_table=11 JAXGFV010000010.1 Genbank gene 46801 46932 . + . ID=gene-SNF32_06845;Name=SNF32_06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06845 JAXGFV010000010.1 GeneMarkS-2+ CDS 46801 46932 . + 0 ID=cds-MDY4307177.1;Parent=gene-SNF32_06845;Dbxref=NCBI_GP:MDY4307177.1;Name=MDY4307177.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06845;product=hypothetical protein;protein_id=MDY4307177.1;transl_table=11 JAXGFV010000010.1 Genbank gene 47025 47429 . + . ID=gene-SNF32_06850;Name=SNF32_06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06850 JAXGFV010000010.1 Protein Homology CDS 47025 47429 . + 0 ID=cds-MDY4307178.1;Parent=gene-SNF32_06850;Dbxref=NCBI_GP:MDY4307178.1;Name=MDY4307178.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015077550.1;locus_tag=SNF32_06850;product=fructose PTS transporter subunit IIA;protein_id=MDY4307178.1;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 47453 47765 . + . ID=gene-SNF32_06855;Name=SNF32_06855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06855;pseudo=true JAXGFV010000010.1 Protein Homology CDS 47453 47765 . + 0 ID=cds-SNF32_06855;Parent=gene-SNF32_06855;Note=frameshifted;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735334.1;locus_tag=SNF32_06855;product=fructose PTS transporter subunit IIB;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank gene 47845 48900 . + . ID=gene-SNF32_06860;Name=SNF32_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06860 JAXGFV010000010.1 Protein Homology CDS 47845 48900 . + 0 ID=cds-MDY4307179.1;Parent=gene-SNF32_06860;Dbxref=NCBI_GP:MDY4307179.1;Name=MDY4307179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010052711.1;locus_tag=SNF32_06860;product=PTS fructose transporter subunit IIC;protein_id=MDY4307179.1;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 48903 51479 . + . ID=gene-SNF32_06865;Name=SNF32_06865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06865;pseudo=true JAXGFV010000010.1 Protein Homology CDS 48903 51479 . + 0 ID=cds-SNF32_06865;Parent=gene-SNF32_06865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723574.1;locus_tag=SNF32_06865;product=alpha-mannosidase;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 51738 52454 . + . ID=gene-SNF32_06870;Name=SNF32_06870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06870;pseudo=true JAXGFV010000010.1 Protein Homology CDS 51738 52454 . + 0 ID=cds-SNF32_06870;Parent=gene-SNF32_06870;Note=frameshifted;Ontology_term=GO:0034219,GO:0015144,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: protein motif:HMM:NF018506.3;locus_tag=SNF32_06870;product=GRP family sugar transporter;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank gene 52544 53176 . - . ID=gene-SNF32_06875;Name=SNF32_06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06875 JAXGFV010000010.1 Protein Homology CDS 52544 53176 . - 0 ID=cds-MDY4307180.1;Parent=gene-SNF32_06875;Dbxref=NCBI_GP:MDY4307180.1;Name=MDY4307180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002348404.1;locus_tag=SNF32_06875;product=hypothetical protein;protein_id=MDY4307180.1;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 53195 53686 . - . ID=gene-SNF32_06880;Name=SNF32_06880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06880;pseudo=true JAXGFV010000010.1 Protein Homology CDS 53195 53686 . - 0 ID=cds-SNF32_06880;Parent=gene-SNF32_06880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002288352.1;locus_tag=SNF32_06880;product=nucleoside 2-deoxyribosyltransferase;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 53707 54920 . - . ID=gene-SNF32_06885;Name=SNF32_06885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06885;pseudo=true JAXGFV010000010.1 Protein Homology CDS 53707 54920 . - 0 ID=cds-SNF32_06885;Parent=gene-SNF32_06885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016627801.1;locus_tag=SNF32_06885;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 55068 56900 . + . ID=gene-SNF32_06890;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=pseudogene;locus_tag=SNF32_06890;pseudo=true JAXGFV010000010.1 Protein Homology CDS 55068 56900 . + 0 ID=cds-SNF32_06890;Parent=gene-SNF32_06890;Note=frameshifted;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723396.1;locus_tag=SNF32_06890;product=translation elongation factor 4;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank gene 57029 57775 . - . ID=gene-SNF32_06895;Name=SNF32_06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06895 JAXGFV010000010.1 Protein Homology CDS 57029 57775 . - 0 ID=cds-MDY4307181.1;Parent=gene-SNF32_06895;Dbxref=NCBI_GP:MDY4307181.1;Name=MDY4307181.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.3;locus_tag=SNF32_06895;product=site-specific integrase;protein_id=MDY4307181.1;transl_table=11 JAXGFV010000010.1 Genbank gene 57844 58119 . - . ID=gene-SNF32_06900;Name=SNF32_06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06900 JAXGFV010000010.1 Protein Homology CDS 57844 58119 . - 0 ID=cds-MDY4307182.1;Parent=gene-SNF32_06900;Dbxref=NCBI_GP:MDY4307182.1;Name=MDY4307182.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026008.3;locus_tag=SNF32_06900;product=Arm DNA-binding domain-containing protein;protein_id=MDY4307182.1;transl_table=11 JAXGFV010000010.1 Genbank gene 58293 58535 . - . ID=gene-SNF32_06905;Name=SNF32_06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06905 JAXGFV010000010.1 Protein Homology CDS 58293 58535 . - 0 ID=cds-MDY4307183.1;Parent=gene-SNF32_06905;Dbxref=NCBI_GP:MDY4307183.1;Name=MDY4307183.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028039.3;locus_tag=SNF32_06905;product=DUF5067 domain-containing protein;protein_id=MDY4307183.1;transl_table=11 JAXGFV010000010.1 Genbank gene 58553 58717 . - . ID=gene-SNF32_06910;Name=SNF32_06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06910 JAXGFV010000010.1 GeneMarkS-2+ CDS 58553 58717 . - 0 ID=cds-MDY4307184.1;Parent=gene-SNF32_06910;Dbxref=NCBI_GP:MDY4307184.1;Name=MDY4307184.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06910;product=hypothetical protein;protein_id=MDY4307184.1;transl_table=11 JAXGFV010000010.1 Genbank gene 59009 59233 . - . ID=gene-SNF32_06915;Name=SNF32_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06915 JAXGFV010000010.1 GeneMarkS-2+ CDS 59009 59233 . - 0 ID=cds-MDY4307185.1;Parent=gene-SNF32_06915;Dbxref=NCBI_GP:MDY4307185.1;Name=MDY4307185.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06915;product=hypothetical protein;protein_id=MDY4307185.1;transl_table=11 JAXGFV010000010.1 Genbank gene 59290 59640 . - . ID=gene-SNF32_06920;Name=SNF32_06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06920 JAXGFV010000010.1 GeneMarkS-2+ CDS 59290 59640 . - 0 ID=cds-MDY4307186.1;Parent=gene-SNF32_06920;Dbxref=NCBI_GP:MDY4307186.1;Name=MDY4307186.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06920;product=hypothetical protein;protein_id=MDY4307186.1;transl_table=11 JAXGFV010000010.1 Genbank gene 59610 60065 . - . ID=gene-SNF32_06925;Name=SNF32_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06925 JAXGFV010000010.1 Protein Homology CDS 59610 60065 . - 0 ID=cds-MDY4307187.1;Parent=gene-SNF32_06925;Dbxref=NCBI_GP:MDY4307187.1;Name=MDY4307187.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024685.3;locus_tag=SNF32_06925;product=SIR2 family protein;protein_id=MDY4307187.1;transl_table=11 JAXGFV010000010.1 Genbank gene 60302 60637 . - . ID=gene-SNF32_06930;Name=SNF32_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06930 JAXGFV010000010.1 GeneMarkS-2+ CDS 60302 60637 . - 0 ID=cds-MDY4307188.1;Parent=gene-SNF32_06930;Dbxref=NCBI_GP:MDY4307188.1;Name=MDY4307188.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06930;product=hypothetical protein;protein_id=MDY4307188.1;transl_table=11 JAXGFV010000010.1 Genbank gene 60756 61184 . - . ID=gene-SNF32_06935;Name=SNF32_06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06935 JAXGFV010000010.1 Protein Homology CDS 60756 61184 . - 0 ID=cds-MDY4307189.1;Parent=gene-SNF32_06935;Dbxref=NCBI_GP:MDY4307189.1;Name=MDY4307189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002337218.1;locus_tag=SNF32_06935;product=ImmA/IrrE family metallo-endopeptidase;protein_id=MDY4307189.1;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 61192 61547 . - . ID=gene-SNF32_06940;Name=SNF32_06940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06940;pseudo=true JAXGFV010000010.1 Protein Homology CDS 61192 61547 . - 0 ID=cds-SNF32_06940;Parent=gene-SNF32_06940;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002319157.1;locus_tag=SNF32_06940;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank gene 61957 62109 . + . ID=gene-SNF32_06945;Name=SNF32_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06945 JAXGFV010000010.1 Protein Homology CDS 61957 62109 . + 0 ID=cds-MDY4307190.1;Parent=gene-SNF32_06945;Dbxref=NCBI_GP:MDY4307190.1;Name=MDY4307190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002324034.1;locus_tag=SNF32_06945;product=hypothetical protein;protein_id=MDY4307190.1;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 62171 62715 . + . ID=gene-SNF32_06950;Name=SNF32_06950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06950;pseudo=true JAXGFV010000010.1 Protein Homology CDS 62171 62715 . + 0 ID=cds-SNF32_06950;Parent=gene-SNF32_06950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629346.1;locus_tag=SNF32_06950;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank gene 62722 62976 . + . ID=gene-SNF32_06955;Name=SNF32_06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06955 JAXGFV010000010.1 Protein Homology CDS 62722 62976 . + 0 ID=cds-MDY4307191.1;Parent=gene-SNF32_06955;Dbxref=NCBI_GP:MDY4307191.1;Name=MDY4307191.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024139.3;locus_tag=SNF32_06955;product=helix-turn-helix domain-containing protein;protein_id=MDY4307191.1;transl_table=11 JAXGFV010000010.1 Genbank gene 63213 63458 . + . ID=gene-SNF32_06960;Name=SNF32_06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06960 JAXGFV010000010.1 Protein Homology CDS 63213 63458 . + 0 ID=cds-MDY4307192.1;Parent=gene-SNF32_06960;Dbxref=NCBI_GP:MDY4307192.1;Name=MDY4307192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002323427.1;locus_tag=SNF32_06960;product=hypothetical protein;protein_id=MDY4307192.1;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 63530 64469 . + . ID=gene-SNF32_06965;Name=SNF32_06965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06965;pseudo=true JAXGFV010000010.1 Protein Homology CDS 63530 64469 . + 0 ID=cds-SNF32_06965;Parent=gene-SNF32_06965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629347.1;locus_tag=SNF32_06965;product=YqaJ viral recombinase family protein;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank gene 64562 65452 . + . ID=gene-SNF32_06970;Name=SNF32_06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06970 JAXGFV010000010.1 Protein Homology CDS 64562 65452 . + 0 ID=cds-MDY4307193.1;Parent=gene-SNF32_06970;Dbxref=NCBI_GP:MDY4307193.1;Name=MDY4307193.1;Ontology_term=GO:0006259,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA metabolic process|0006259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002334723.1;locus_tag=SNF32_06970;product=recombinase RecT;protein_id=MDY4307193.1;transl_table=11 JAXGFV010000010.1 Genbank pseudogene 65489 66391 . + . ID=gene-SNF32_06975;Name=SNF32_06975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06975;pseudo=true JAXGFV010000010.1 Protein Homology CDS 65489 66391 . + 0 ID=cds-SNF32_06975;Parent=gene-SNF32_06975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002314896.1;locus_tag=SNF32_06975;product=DUF4373 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000010.1 Genbank gene 66391 66753 . + . ID=gene-SNF32_06980;Name=SNF32_06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06980 JAXGFV010000010.1 Protein Homology CDS 66391 66753 . + 0 ID=cds-MDY4307194.1;Parent=gene-SNF32_06980;Dbxref=NCBI_GP:MDY4307194.1;Name=MDY4307194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005879809.1;locus_tag=SNF32_06980;product=DUF1064 domain-containing protein;protein_id=MDY4307194.1;transl_table=11 JAXGFV010000010.1 Genbank gene 66781 66939 . + . ID=gene-SNF32_06985;Name=SNF32_06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06985 JAXGFV010000010.1 GeneMarkS-2+ CDS 66781 66939 . + 0 ID=cds-MDY4307195.1;Parent=gene-SNF32_06985;Dbxref=NCBI_GP:MDY4307195.1;Name=MDY4307195.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06985;product=hypothetical protein;protein_id=MDY4307195.1;transl_table=11 JAXGFV010000010.1 Genbank gene 66936 67133 . + . ID=gene-SNF32_06990;Name=SNF32_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06990 JAXGFV010000010.1 Protein Homology CDS 66936 67133 . + 0 ID=cds-MDY4307196.1;Parent=gene-SNF32_06990;Dbxref=NCBI_GP:MDY4307196.1;Name=MDY4307196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005874792.1;locus_tag=SNF32_06990;product=hypothetical protein;protein_id=MDY4307196.1;transl_table=11 JAXGFV010000010.1 Genbank gene 67115 67294 . + . ID=gene-SNF32_06995;Name=SNF32_06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06995 JAXGFV010000010.1 GeneMarkS-2+ CDS 67115 67294 . + 0 ID=cds-MDY4307197.1;Parent=gene-SNF32_06995;Dbxref=NCBI_GP:MDY4307197.1;Name=MDY4307197.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06995;product=hypothetical protein;protein_id=MDY4307197.1;transl_table=11 JAXGFV010000010.1 Genbank gene 67257 67571 . + . ID=gene-SNF32_07000;Name=SNF32_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07000 JAXGFV010000010.1 Protein Homology CDS 67257 67571 . + 0 ID=cds-MDY4307198.1;Parent=gene-SNF32_07000;Dbxref=NCBI_GP:MDY4307198.1;Name=MDY4307198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002322967.1;locus_tag=SNF32_07000;product=MazG-like family protein;protein_id=MDY4307198.1;transl_table=11 JAXGFV010000010.1 Genbank gene 67568 67777 . + . ID=gene-SNF32_07005;Name=SNF32_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07005 JAXGFV010000010.1 GeneMarkS-2+ CDS 67568 67777 . + 0 ID=cds-MDY4307199.1;Parent=gene-SNF32_07005;Dbxref=NCBI_GP:MDY4307199.1;Name=MDY4307199.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07005;product=hypothetical protein;protein_id=MDY4307199.1;transl_table=11 JAXGFV010000010.1 Genbank gene 67774 68166 . + . ID=gene-SNF32_07010;Name=SNF32_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07010 JAXGFV010000010.1 Protein Homology CDS 67774 68166 . + 0 ID=cds-MDY4307200.1;Parent=gene-SNF32_07010;Dbxref=NCBI_GP:MDY4307200.1;Name=MDY4307200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010733967.1;locus_tag=SNF32_07010;product=YopX family protein;protein_id=MDY4307200.1;transl_table=11 JAXGFV010000010.1 Genbank gene 68591 68788 . + . ID=gene-SNF32_07015;Name=SNF32_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07015 JAXGFV010000010.1 Protein Homology CDS 68591 68788 . + 0 ID=cds-MDY4307201.1;Parent=gene-SNF32_07015;Dbxref=NCBI_GP:MDY4307201.1;Name=MDY4307201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010720126.1;locus_tag=SNF32_07015;product=hypothetical protein;protein_id=MDY4307201.1;transl_table=11 JAXGFV010000010.1 Genbank gene 68866 69012 . + . ID=gene-SNF32_07020;Name=SNF32_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07020 JAXGFV010000010.1 GeneMarkS-2+ CDS 68866 69012 . + 0 ID=cds-MDY4307202.1;Parent=gene-SNF32_07020;Dbxref=NCBI_GP:MDY4307202.1;Name=MDY4307202.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07020;product=hypothetical protein;protein_id=MDY4307202.1;transl_table=11 JAXGFV010000010.1 Genbank gene 69030 69497 . + . ID=gene-SNF32_07025;Name=SNF32_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07025 JAXGFV010000010.1 Protein Homology CDS 69030 69497 . + 0 ID=cds-MDY4307203.1;Parent=gene-SNF32_07025;Dbxref=NCBI_GP:MDY4307203.1;Name=MDY4307203.1;Ontology_term=GO:0008168,GO:0008757;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002299582.1;locus_tag=SNF32_07025;product=methyltransferase domain-containing protein;protein_id=MDY4307203.1;transl_table=11 JAXGFV010000010.1 Genbank gene 69494 69871 . + . ID=gene-SNF32_07030;Name=SNF32_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07030 JAXGFV010000010.1 Protein Homology CDS 69494 69871 . + 0 ID=cds-MDY4307204.1;Parent=gene-SNF32_07030;Dbxref=NCBI_GP:MDY4307204.1;Name=MDY4307204.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019467.3;locus_tag=SNF32_07030;product=DUF1642 domain-containing protein;protein_id=MDY4307204.1;transl_table=11 JAXGFV010000010.1 Genbank gene 70023 70223 . + . ID=gene-SNF32_07035;Name=SNF32_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07035 JAXGFV010000010.1 GeneMarkS-2+ CDS 70023 70223 . + 0 ID=cds-MDY4307205.1;Parent=gene-SNF32_07035;Dbxref=NCBI_GP:MDY4307205.1;Name=MDY4307205.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07035;product=hypothetical protein;protein_id=MDY4307205.1;transl_table=11 JAXGFV010000010.1 Genbank gene 70220 70351 . + . ID=gene-SNF32_07040;Name=SNF32_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07040 JAXGFV010000010.1 GeneMarkS-2+ CDS 70220 70351 . + 0 ID=cds-MDY4307206.1;Parent=gene-SNF32_07040;Dbxref=NCBI_GP:MDY4307206.1;Name=MDY4307206.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07040;product=hypothetical protein;protein_id=MDY4307206.1;transl_table=11 JAXGFV010000010.1 Genbank gene 70394 70699 . + . ID=gene-SNF32_07045;Name=SNF32_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07045 JAXGFV010000010.1 GeneMarkS-2+ CDS 70394 70699 . + 0 ID=cds-MDY4307207.1;Parent=gene-SNF32_07045;Dbxref=NCBI_GP:MDY4307207.1;Name=MDY4307207.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07045;product=hypothetical protein;protein_id=MDY4307207.1;transl_table=11 JAXGFV010000010.1 Genbank gene 71093 71299 . + . ID=gene-SNF32_07050;Name=SNF32_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07050 JAXGFV010000010.1 GeneMarkS-2+ CDS 71093 71299 . + 0 ID=cds-MDY4307208.1;Parent=gene-SNF32_07050;Dbxref=NCBI_GP:MDY4307208.1;Name=MDY4307208.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07050;product=hypothetical protein;protein_id=MDY4307208.1;transl_table=11 JAXGFV010000010.1 Genbank gene 71278 71475 . + . ID=gene-SNF32_07055;Name=SNF32_07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07055 JAXGFV010000010.1 GeneMarkS-2+ CDS 71278 71475 . + 0 ID=cds-MDY4307209.1;Parent=gene-SNF32_07055;Dbxref=NCBI_GP:MDY4307209.1;Name=MDY4307209.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07055;product=hypothetical protein;protein_id=MDY4307209.1;transl_table=11 JAXGFV010000010.1 Genbank gene 71487 71671 . + . ID=gene-SNF32_07060;Name=SNF32_07060;end_range=71671,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07060;partial=true JAXGFV010000010.1 Protein Homology CDS 71487 71671 . + 0 ID=cds-MDY4307210.1;Parent=gene-SNF32_07060;Dbxref=NCBI_GP:MDY4307210.1;Name=MDY4307210.1;end_range=71671,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177548.1;locus_tag=SNF32_07060;partial=true;product=hypothetical protein;protein_id=MDY4307210.1;transl_table=11 ##sequence-region JAXGFV010000100.1 1 3479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000100.1 Genbank region 1 3479 . + . ID=JAXGFV010000100.1:1..3479;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000100.1 Genbank pseudogene 483 1531 . + . ID=gene-SNF32_16870;Name=SNF32_16870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16870;pseudo=true JAXGFV010000100.1 Protein Homology CDS 483 1531 . + 0 ID=cds-SNF32_16870;Parent=gene-SNF32_16870;Note=frameshifted;Ontology_term=GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;inference=COORDINATES: protein motif:HMM:NF013056.3;locus_tag=SNF32_16870;product=NCS2 family permease;pseudo=true;transl_table=11 JAXGFV010000100.1 Genbank gene 1495 1698 . + . ID=gene-SNF32_16875;Name=SNF32_16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16875 JAXGFV010000100.1 GeneMarkS-2+ CDS 1495 1698 . + 0 ID=cds-MDY4308182.1;Parent=gene-SNF32_16875;Dbxref=NCBI_GP:MDY4308182.1;Name=MDY4308182.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16875;product=hypothetical protein;protein_id=MDY4308182.1;transl_table=11 JAXGFV010000100.1 Genbank gene 2667 3182 . + . ID=gene-SNF32_16880;Name=SNF32_16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16880 JAXGFV010000100.1 Protein Homology CDS 2667 3182 . + 0 ID=cds-MDY4308183.1;Parent=gene-SNF32_16880;Dbxref=NCBI_GP:MDY4308183.1;Name=MDY4308183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010752087.1;locus_tag=SNF32_16880;product=hypothetical protein;protein_id=MDY4308183.1;transl_table=11 ##sequence-region JAXGFV010000101.1 1 3433 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000101.1 Genbank region 1 3433 . + . ID=JAXGFV010000101.1:1..3433;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000101.1 Genbank gene 70 321 . - . ID=gene-SNF32_16885;Name=SNF32_16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16885 JAXGFV010000101.1 GeneMarkS-2+ CDS 70 321 . - 0 ID=cds-MDY4308184.1;Parent=gene-SNF32_16885;Dbxref=NCBI_GP:MDY4308184.1;Name=MDY4308184.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16885;product=hypothetical protein;protein_id=MDY4308184.1;transl_table=11 JAXGFV010000101.1 Genbank gene 965 1255 . - . ID=gene-SNF32_16890;Name=SNF32_16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16890 JAXGFV010000101.1 GeneMarkS-2+ CDS 965 1255 . - 0 ID=cds-MDY4308185.1;Parent=gene-SNF32_16890;Dbxref=NCBI_GP:MDY4308185.1;Name=MDY4308185.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16890;product=hypothetical protein;protein_id=MDY4308185.1;transl_table=11 JAXGFV010000101.1 Genbank gene 1562 1909 . - . ID=gene-SNF32_16895;Name=SNF32_16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16895 JAXGFV010000101.1 Protein Homology CDS 1562 1909 . - 0 ID=cds-MDY4308186.1;Parent=gene-SNF32_16895;Dbxref=NCBI_GP:MDY4308186.1;Name=MDY4308186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723939.1;locus_tag=SNF32_16895;product=hypothetical protein;protein_id=MDY4308186.1;transl_table=11 JAXGFV010000101.1 Genbank gene 2148 2381 . - . ID=gene-SNF32_16900;Name=SNF32_16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16900 JAXGFV010000101.1 GeneMarkS-2+ CDS 2148 2381 . - 0 ID=cds-MDY4308187.1;Parent=gene-SNF32_16900;Dbxref=NCBI_GP:MDY4308187.1;Name=MDY4308187.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16900;product=hypothetical protein;protein_id=MDY4308187.1;transl_table=11 JAXGFV010000101.1 Genbank gene 2536 3246 . - . ID=gene-SNF32_16905;Name=SNF32_16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16905 JAXGFV010000101.1 Protein Homology CDS 2536 3246 . - 0 ID=cds-MDY4308188.1;Parent=gene-SNF32_16905;Dbxref=NCBI_GP:MDY4308188.1;Name=MDY4308188.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025918.3;locus_tag=SNF32_16905;product=SMI1/KNR4 family protein;protein_id=MDY4308188.1;transl_table=11 ##sequence-region JAXGFV010000102.1 1 3430 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000102.1 Genbank region 1 3430 . + . ID=JAXGFV010000102.1:1..3430;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000102.1 Genbank gene 1 575 . - . ID=gene-SNF32_16910;Name=SNF32_16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16910;partial=true;start_range=.,1 JAXGFV010000102.1 Protein Homology CDS 1 575 . - 0 ID=cds-MDY4308189.1;Parent=gene-SNF32_16910;Dbxref=NCBI_GP:MDY4308189.1;Name=MDY4308189.1;Ontology_term=GO:0007165,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF012722.3;locus_tag=SNF32_16910;partial=true;product=HAMP domain-containing sensor histidine kinase;protein_id=MDY4308189.1;start_range=.,1;transl_table=11 JAXGFV010000102.1 Genbank gene 583 1122 . - . ID=gene-SNF32_16915;Name=SNF32_16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16915 JAXGFV010000102.1 GeneMarkS-2+ CDS 583 1122 . - 0 ID=cds-MDY4308190.1;Parent=gene-SNF32_16915;Dbxref=NCBI_GP:MDY4308190.1;Name=MDY4308190.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16915;product=hypothetical protein;protein_id=MDY4308190.1;transl_table=11 JAXGFV010000102.1 Genbank pseudogene 1106 1761 . - . ID=gene-SNF32_16920;Name=SNF32_16920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16920;pseudo=true JAXGFV010000102.1 Protein Homology CDS 1106 1761 . - 0 ID=cds-SNF32_16920;Parent=gene-SNF32_16920;Note=frameshifted;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723143.1;locus_tag=SNF32_16920;product=response regulator transcription factor;pseudo=true;transl_table=11 JAXGFV010000102.1 Genbank gene 1774 2676 . - . ID=gene-SNF32_16925;Name=SNF32_16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16925 JAXGFV010000102.1 Protein Homology CDS 1774 2676 . - 0 ID=cds-MDY4308191.1;Parent=gene-SNF32_16925;Dbxref=NCBI_GP:MDY4308191.1;Name=MDY4308191.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF024116.3;locus_tag=SNF32_16925;product=FtsX-like permease family protein;protein_id=MDY4308191.1;transl_table=11 JAXGFV010000102.1 Genbank gene 2866 3003 . - . ID=gene-SNF32_16930;Name=SNF32_16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16930 JAXGFV010000102.1 GeneMarkS-2+ CDS 2866 3003 . - 0 ID=cds-MDY4308192.1;Parent=gene-SNF32_16930;Dbxref=NCBI_GP:MDY4308192.1;Name=MDY4308192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16930;product=hypothetical protein;protein_id=MDY4308192.1;transl_table=11 JAXGFV010000102.1 Genbank gene 3010 3430 . - . ID=gene-SNF32_16935;Name=SNF32_16935;end_range=3430,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16935;partial=true JAXGFV010000102.1 Protein Homology CDS 3010 3430 . - 1 ID=cds-MDY4308193.1;Parent=gene-SNF32_16935;Dbxref=NCBI_GP:MDY4308193.1;Name=MDY4308193.1;Ontology_term=GO:0005524;end_range=3430,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736223.1;locus_tag=SNF32_16935;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=MDY4308193.1;transl_table=11 ##sequence-region JAXGFV010000103.1 1 2957 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000103.1 Genbank region 1 2957 . + . ID=JAXGFV010000103.1:1..2957;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000103.1 Genbank gene 1 381 . + . ID=gene-SNF32_16940;Name=SNF32_16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16940;partial=true;start_range=.,1 JAXGFV010000103.1 GeneMarkS-2+ CDS 1 381 . + 0 ID=cds-MDY4308194.1;Parent=gene-SNF32_16940;Dbxref=NCBI_GP:MDY4308194.1;Name=MDY4308194.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16940;partial=true;product=hypothetical protein;protein_id=MDY4308194.1;start_range=.,1;transl_table=11 JAXGFV010000103.1 Genbank gene 375 596 . + . ID=gene-SNF32_16945;Name=SNF32_16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16945 JAXGFV010000103.1 GeneMarkS-2+ CDS 375 596 . + 0 ID=cds-MDY4308195.1;Parent=gene-SNF32_16945;Dbxref=NCBI_GP:MDY4308195.1;Name=MDY4308195.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16945;product=hypothetical protein;protein_id=MDY4308195.1;transl_table=11 JAXGFV010000103.1 Genbank gene 698 1423 . + . ID=gene-SNF32_16950;Name=SNF32_16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16950 JAXGFV010000103.1 GeneMarkS-2+ CDS 698 1423 . + 0 ID=cds-MDY4308196.1;Parent=gene-SNF32_16950;Dbxref=NCBI_GP:MDY4308196.1;Name=MDY4308196.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16950;product=hypothetical protein;protein_id=MDY4308196.1;transl_table=11 JAXGFV010000103.1 Genbank gene 1500 1976 . + . ID=gene-SNF32_16955;Name=SNF32_16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16955 JAXGFV010000103.1 GeneMarkS-2+ CDS 1500 1976 . + 0 ID=cds-MDY4308197.1;Parent=gene-SNF32_16955;Dbxref=NCBI_GP:MDY4308197.1;Name=MDY4308197.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16955;product=hypothetical protein;protein_id=MDY4308197.1;transl_table=11 JAXGFV010000103.1 Genbank gene 1997 2611 . + . ID=gene-SNF32_16960;Name=SNF32_16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16960 JAXGFV010000103.1 GeneMarkS-2+ CDS 1997 2611 . + 0 ID=cds-MDY4308198.1;Parent=gene-SNF32_16960;Dbxref=NCBI_GP:MDY4308198.1;Name=MDY4308198.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16960;product=hypothetical protein;protein_id=MDY4308198.1;transl_table=11 JAXGFV010000103.1 Genbank gene 2676 2957 . + . ID=gene-SNF32_16965;Name=SNF32_16965;end_range=2957,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16965;partial=true JAXGFV010000103.1 Protein Homology CDS 2676 2957 . + 0 ID=cds-MDY4308199.1;Parent=gene-SNF32_16965;Dbxref=NCBI_GP:MDY4308199.1;Name=MDY4308199.1;end_range=2957,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018196.3;locus_tag=SNF32_16965;partial=true;product=MucBP domain-containing protein;protein_id=MDY4308199.1;transl_table=11 ##sequence-region JAXGFV010000104.1 1 2881 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000104.1 Genbank region 1 2881 . + . ID=JAXGFV010000104.1:1..2881;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000104.1 Genbank pseudogene 283 1109 . + . ID=gene-SNF32_16970;Name=SNF32_16970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16970;pseudo=true JAXGFV010000104.1 Protein Homology CDS 283 1109 . + 0 ID=cds-SNF32_16970;Parent=gene-SNF32_16970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025081.3;locus_tag=SNF32_16970;product=lysozyme family protein;pseudo=true;transl_table=11 JAXGFV010000104.1 Genbank gene 1387 1923 . + . ID=gene-SNF32_16975;Name=SNF32_16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16975 JAXGFV010000104.1 GeneMarkS-2+ CDS 1387 1923 . + 0 ID=cds-MDY4308200.1;Parent=gene-SNF32_16975;Dbxref=NCBI_GP:MDY4308200.1;Name=MDY4308200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16975;product=hypothetical protein;protein_id=MDY4308200.1;transl_table=11 JAXGFV010000104.1 Genbank gene 2338 2826 . + . ID=gene-SNF32_16980;Name=SNF32_16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16980 JAXGFV010000104.1 GeneMarkS-2+ CDS 2338 2826 . + 0 ID=cds-MDY4308201.1;Parent=gene-SNF32_16980;Dbxref=NCBI_GP:MDY4308201.1;Name=MDY4308201.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16980;product=hypothetical protein;protein_id=MDY4308201.1;transl_table=11 ##sequence-region JAXGFV010000105.1 1 2742 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000105.1 Genbank region 1 2742 . + . ID=JAXGFV010000105.1:1..2742;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000105.1 Genbank gene 831 1271 . + . ID=gene-SNF32_16985;Name=SNF32_16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16985 JAXGFV010000105.1 GeneMarkS-2+ CDS 831 1271 . + 0 ID=cds-MDY4308202.1;Parent=gene-SNF32_16985;Dbxref=NCBI_GP:MDY4308202.1;Name=MDY4308202.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16985;product=hypothetical protein;protein_id=MDY4308202.1;transl_table=11 JAXGFV010000105.1 Genbank gene 1471 1899 . + . ID=gene-SNF32_16990;Name=SNF32_16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16990 JAXGFV010000105.1 GeneMarkS-2+ CDS 1471 1899 . + 0 ID=cds-MDY4308203.1;Parent=gene-SNF32_16990;Dbxref=NCBI_GP:MDY4308203.1;Name=MDY4308203.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16990;product=hypothetical protein;protein_id=MDY4308203.1;transl_table=11 JAXGFV010000105.1 Genbank gene 2014 2694 . + . ID=gene-SNF32_16995;Name=SNF32_16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16995 JAXGFV010000105.1 GeneMarkS-2+ CDS 2014 2694 . + 0 ID=cds-MDY4308204.1;Parent=gene-SNF32_16995;Dbxref=NCBI_GP:MDY4308204.1;Name=MDY4308204.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16995;product=hypothetical protein;protein_id=MDY4308204.1;transl_table=11 ##sequence-region JAXGFV010000106.1 1 2662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000106.1 Genbank region 1 2662 . + . ID=JAXGFV010000106.1:1..2662;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000106.1 Genbank gene 1 1070 . + . ID=gene-SNF32_17000;Name=SNF32_17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17000;partial=true;start_range=.,1 JAXGFV010000106.1 GeneMarkS-2+ CDS 1 1070 . + 2 ID=cds-MDY4308205.1;Parent=gene-SNF32_17000;Dbxref=NCBI_GP:MDY4308205.1;Name=MDY4308205.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_17000;partial=true;product=hypothetical protein;protein_id=MDY4308205.1;start_range=.,1;transl_table=11 JAXGFV010000106.1 Genbank gene 1331 1570 . + . ID=gene-SNF32_17005;Name=SNF32_17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17005 JAXGFV010000106.1 GeneMarkS-2+ CDS 1331 1570 . + 0 ID=cds-MDY4308206.1;Parent=gene-SNF32_17005;Dbxref=NCBI_GP:MDY4308206.1;Name=MDY4308206.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_17005;product=hypothetical protein;protein_id=MDY4308206.1;transl_table=11 JAXGFV010000106.1 Genbank gene 1630 1782 . + . ID=gene-SNF32_17010;Name=SNF32_17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17010 JAXGFV010000106.1 GeneMarkS-2+ CDS 1630 1782 . + 0 ID=cds-MDY4308207.1;Parent=gene-SNF32_17010;Dbxref=NCBI_GP:MDY4308207.1;Name=MDY4308207.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_17010;product=hypothetical protein;protein_id=MDY4308207.1;transl_table=11 JAXGFV010000106.1 Genbank gene 1779 1967 . + . ID=gene-SNF32_17015;Name=SNF32_17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17015 JAXGFV010000106.1 GeneMarkS-2+ CDS 1779 1967 . + 0 ID=cds-MDY4308208.1;Parent=gene-SNF32_17015;Dbxref=NCBI_GP:MDY4308208.1;Name=MDY4308208.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_17015;product=hypothetical protein;protein_id=MDY4308208.1;transl_table=11 JAXGFV010000106.1 Genbank gene 2006 2662 . + . ID=gene-SNF32_17020;Name=SNF32_17020;end_range=2662,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17020;partial=true JAXGFV010000106.1 GeneMarkS-2+ CDS 2006 2662 . + 0 ID=cds-MDY4308209.1;Parent=gene-SNF32_17020;Dbxref=NCBI_GP:MDY4308209.1;Name=MDY4308209.1;end_range=2662,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_17020;partial=true;product=hypothetical protein;protein_id=MDY4308209.1;transl_table=11 ##sequence-region JAXGFV010000107.1 1 2450 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000107.1 Genbank region 1 2450 . + . ID=JAXGFV010000107.1:1..2450;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000107.1 Genbank gene 193 609 . + . ID=gene-SNF32_17025;Name=SNF32_17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17025 JAXGFV010000107.1 GeneMarkS-2+ CDS 193 609 . + 0 ID=cds-MDY4308210.1;Parent=gene-SNF32_17025;Dbxref=NCBI_GP:MDY4308210.1;Name=MDY4308210.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_17025;product=hypothetical protein;protein_id=MDY4308210.1;transl_table=11 JAXGFV010000107.1 Genbank gene 1112 1735 . + . ID=gene-SNF32_17030;Name=SNF32_17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17030 JAXGFV010000107.1 GeneMarkS-2+ CDS 1112 1735 . + 0 ID=cds-MDY4308211.1;Parent=gene-SNF32_17030;Dbxref=NCBI_GP:MDY4308211.1;Name=MDY4308211.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_17030;product=hypothetical protein;protein_id=MDY4308211.1;transl_table=11 ##sequence-region JAXGFV010000108.1 1 2261 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000108.1 Genbank region 1 2261 . + . ID=JAXGFV010000108.1:1..2261;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000108.1 Genbank pseudogene 137 1858 . + . ID=gene-SNF32_17035;Name=SNF32_17035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_17035;pseudo=true JAXGFV010000108.1 Protein Homology CDS 137 1858 . + 0 ID=cds-SNF32_17035;Parent=gene-SNF32_17035;Note=frameshifted;Ontology_term=GO:0016868;gbkey=CDS;go_function=intramolecular phosphotransferase activity|0016868||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005880351.1;locus_tag=SNF32_17035;product=phospho-sugar mutase;pseudo=true;transl_table=11 JAXGFV010000108.1 Genbank pseudogene 1922 2223 . + . ID=gene-SNF32_17040;Name=SNF32_17040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_17040;pseudo=true JAXGFV010000108.1 Protein Homology CDS 1922 2223 . + 0 ID=cds-SNF32_17040;Parent=gene-SNF32_17040;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734954.1;locus_tag=SNF32_17040;product=metalloregulator ArsR/SmtB family transcription factor;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000109.1 1 1942 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000109.1 Genbank region 1 1942 . + . ID=JAXGFV010000109.1:1..1942;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000109.1 Genbank pseudogene 271 1829 . - . ID=gene-SNF32_17045;Name=SNF32_17045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_17045;pseudo=true JAXGFV010000109.1 Protein Homology CDS 271 1829 . - 0 ID=cds-SNF32_17045;Parent=gene-SNF32_17045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734184.1;locus_tag=SNF32_17045;product=glycoside hydrolase family 43 protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000011.1 1 67055 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000011.1 Genbank region 1 67055 . + . ID=JAXGFV010000011.1:1..67055;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000011.1 Genbank gene 1 439 . + . ID=gene-SNF32_07065;Name=SNF32_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07065;partial=true;start_range=.,1 JAXGFV010000011.1 Protein Homology CDS 1 439 . + 1 ID=cds-MDY4307211.1;Parent=gene-SNF32_07065;Dbxref=NCBI_GP:MDY4307211.1;Name=MDY4307211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723702.1;locus_tag=SNF32_07065;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=MDY4307211.1;start_range=.,1;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 614 1128 . - . ID=gene-SNF32_07070;Name=SNF32_07070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07070;pseudo=true JAXGFV010000011.1 Protein Homology CDS 614 1128 . - 0 ID=cds-SNF32_07070;Parent=gene-SNF32_07070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002291449.1;locus_tag=SNF32_07070;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 1155 2023 . - . ID=gene-SNF32_07075;Name=SNF32_07075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07075;pseudo=true JAXGFV010000011.1 Protein Homology CDS 1155 2023 . - 0 ID=cds-SNF32_07075;Parent=gene-SNF32_07075;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002308385.1;locus_tag=SNF32_07075;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 2147 2824 . + . ID=gene-SNF32_07080;Name=SNF32_07080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07080;pseudo=true JAXGFV010000011.1 Protein Homology CDS 2147 2824 . + 0 ID=cds-SNF32_07080;Parent=gene-SNF32_07080;Note=frameshifted;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002306109.1;locus_tag=SNF32_07080;product=uracil-DNA glycosylase;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 2979 3957 . + . ID=gene-SNF32_07085;Name=pta;gbkey=Gene;gene=pta;gene_biotype=pseudogene;locus_tag=SNF32_07085;pseudo=true JAXGFV010000011.1 Protein Homology CDS 2979 3957 . + 0 ID=cds-SNF32_07085;Parent=gene-SNF32_07085;Note=frameshifted;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016623326.1;locus_tag=SNF32_07085;product=phosphate acetyltransferase;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 4070 4542 . + . ID=gene-SNF32_07090;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=pseudogene;locus_tag=SNF32_07090;pseudo=true JAXGFV010000011.1 Protein Homology CDS 4070 4542 . + 0 ID=cds-SNF32_07090;Parent=gene-SNF32_07090;Note=frameshifted;Ontology_term=GO:0006400,GO:0016887,GO:0005737;gbkey=CDS;gene=tsaE;go_component=cytoplasm|0005737||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723276.1;locus_tag=SNF32_07090;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank gene 4535 4753 . + . ID=gene-SNF32_07095;Name=SNF32_07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07095 JAXGFV010000011.1 GeneMarkS-2+ CDS 4535 4753 . + 0 ID=cds-MDY4307212.1;Parent=gene-SNF32_07095;Dbxref=NCBI_GP:MDY4307212.1;Name=MDY4307212.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07095;product=hypothetical protein;protein_id=MDY4307212.1;transl_table=11 JAXGFV010000011.1 Genbank gene 4747 5022 . + . ID=gene-SNF32_07100;Name=SNF32_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07100 JAXGFV010000011.1 Protein Homology CDS 4747 5022 . + 0 ID=cds-MDY4307213.1;Parent=gene-SNF32_07100;Dbxref=NCBI_GP:MDY4307213.1;Name=MDY4307213.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: protein motif:HMM:NF024698.3;locus_tag=SNF32_07100;product=GNAT family N-acetyltransferase;protein_id=MDY4307213.1;transl_table=11 JAXGFV010000011.1 Genbank gene 5206 5724 . - . ID=gene-SNF32_07105;Name=SNF32_07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07105 JAXGFV010000011.1 Protein Homology CDS 5206 5724 . - 0 ID=cds-MDY4307214.1;Parent=gene-SNF32_07105;Dbxref=NCBI_GP:MDY4307214.1;Name=MDY4307214.1;Ontology_term=GO:0003676,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002356400.1;locus_tag=SNF32_07105;product=3'-5' exonuclease;protein_id=MDY4307214.1;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 5877 6626 . - . ID=gene-SNF32_07110;Name=SNF32_07110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07110;pseudo=true JAXGFV010000011.1 Protein Homology CDS 5877 6626 . - 0 ID=cds-SNF32_07110;Parent=gene-SNF32_07110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002291429.1;locus_tag=SNF32_07110;product=exodeoxyribonuclease III;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 6731 7649 . + . ID=gene-SNF32_07115;Name=SNF32_07115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07115;pseudo=true JAXGFV010000011.1 Protein Homology CDS 6731 7649 . + 0 ID=cds-SNF32_07115;Parent=gene-SNF32_07115;Note=frameshifted;Ontology_term=GO:0016491,GO:0016651;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734767.1;locus_tag=SNF32_07115;product=Gfo/Idh/MocA family oxidoreductase;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 7720 8624 . + . ID=gene-SNF32_07120;Name=murB;gbkey=Gene;gene=murB;gene_biotype=pseudogene;locus_tag=SNF32_07120;pseudo=true JAXGFV010000011.1 Protein Homology CDS 7720 8624 . + 0 ID=cds-SNF32_07120;Parent=gene-SNF32_07120;Note=frameshifted;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734768.1;locus_tag=SNF32_07120;product=UDP-N-acetylmuramate dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank gene 8643 9218 . + . ID=gene-SNF32_07125;Name=SNF32_07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07125 JAXGFV010000011.1 Protein Homology CDS 8643 9218 . + 0 ID=cds-MDY4307215.1;Parent=gene-SNF32_07125;Dbxref=NCBI_GP:MDY4307215.1;Name=MDY4307215.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734769.1;locus_tag=SNF32_07125;product=GNAT family N-acetyltransferase;protein_id=MDY4307215.1;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 10086 10882 . - . ID=gene-SNF32_07130;Name=SNF32_07130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07130;pseudo=true JAXGFV010000011.1 Protein Homology CDS 10086 10882 . - 0 ID=cds-SNF32_07130;Parent=gene-SNF32_07130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010719854.1;locus_tag=SNF32_07130;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 11376 11833 . + . ID=gene-SNF32_07135;Name=SNF32_07135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07135;pseudo=true JAXGFV010000011.1 Protein Homology CDS 11376 11833 . + 0 ID=cds-SNF32_07135;Parent=gene-SNF32_07135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013086.3;locus_tag=SNF32_07135;product=FAD-binding protein;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 11866 12737 . + . ID=gene-SNF32_07140;Name=SNF32_07140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07140;pseudo=true JAXGFV010000011.1 Protein Homology CDS 11866 12737 . + 0 ID=cds-SNF32_07140;Parent=gene-SNF32_07140;Note=frameshifted;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF013086.3;locus_tag=SNF32_07140;product=flavocytochrome c;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 12724 13706 . - . ID=gene-SNF32_07145;Name=SNF32_07145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07145;pseudo=true JAXGFV010000011.1 Protein Homology CDS 12724 13706 . - 0 ID=cds-SNF32_07145;Parent=gene-SNF32_07145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734772.1;locus_tag=SNF32_07145;product=NAD(P)H-quinone oxidoreductase;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank gene 13709 14359 . - . ID=gene-SNF32_07150;Name=SNF32_07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07150 JAXGFV010000011.1 Protein Homology CDS 13709 14359 . - 0 ID=cds-MDY4307216.1;Parent=gene-SNF32_07150;Dbxref=NCBI_GP:MDY4307216.1;Name=MDY4307216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734773.1;locus_tag=SNF32_07150;product=NAD(P)-binding oxidoreductase;protein_id=MDY4307216.1;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 14499 15112 . - . ID=gene-SNF32_07155;Name=SNF32_07155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07155;pseudo=true JAXGFV010000011.1 Protein Homology CDS 14499 15112 . - 0 ID=cds-SNF32_07155;Parent=gene-SNF32_07155;Note=frameshifted;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734774.1;locus_tag=SNF32_07155;product=ECF transporter S component;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 15129 15685 . - . ID=gene-SNF32_07160;Name=coaC;gbkey=Gene;gene=coaC;gene_biotype=pseudogene;locus_tag=SNF32_07160;pseudo=true JAXGFV010000011.1 Protein Homology CDS 15129 15685 . - 0 ID=cds-SNF32_07160;Parent=gene-SNF32_07160;Note=frameshifted;Ontology_term=GO:0015937,GO:0004633;gbkey=CDS;gene=coaC;go_function=phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177044.1;locus_tag=SNF32_07160;product=phosphopantothenoylcysteine decarboxylase;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 15692 16419 . - . ID=gene-SNF32_07165;Name=SNF32_07165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07165;pseudo=true JAXGFV010000011.1 Protein Homology CDS 15692 16419 . - 0 ID=cds-SNF32_07165;Parent=gene-SNF32_07165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723758.1;locus_tag=SNF32_07165;product=phosphopantothenate--cysteine ligase;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 16416 17402 . - . ID=gene-SNF32_07170;Name=SNF32_07170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07170;pseudo=true JAXGFV010000011.1 Protein Homology CDS 16416 17402 . - 0 ID=cds-SNF32_07170;Parent=gene-SNF32_07170;Note=frameshifted;Ontology_term=GO:0008152,GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734777.1;locus_tag=SNF32_07170;product=acryloyl-CoA reductase;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 17631 18170 . + . ID=gene-SNF32_07175;Name=SNF32_07175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07175;pseudo=true JAXGFV010000011.1 Protein Homology CDS 17631 18170 . + 0 ID=cds-SNF32_07175;Parent=gene-SNF32_07175;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002308415.1;locus_tag=SNF32_07175;product=XRE family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 18188 19269 . + . ID=gene-SNF32_07180;Name=SNF32_07180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07180;pseudo=true JAXGFV010000011.1 Protein Homology CDS 18188 19269 . + 0 ID=cds-SNF32_07180;Parent=gene-SNF32_07180;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016185868.1;locus_tag=SNF32_07180;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 19281 20085 . + . ID=gene-SNF32_07185;Name=SNF32_07185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07185;pseudo=true JAXGFV010000011.1 Protein Homology CDS 19281 20085 . + 0 ID=cds-SNF32_07185;Parent=gene-SNF32_07185;Note=frameshifted;Ontology_term=GO:0055085,GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010738847.1;locus_tag=SNF32_07185;product=ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 20057 20906 . + . ID=gene-SNF32_07190;Name=SNF32_07190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07190;pseudo=true JAXGFV010000011.1 Protein Homology CDS 20057 20906 . + 0 ID=cds-SNF32_07190;Parent=gene-SNF32_07190;Note=frameshifted;Ontology_term=GO:0055085,GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002356512.1;locus_tag=SNF32_07190;product=ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 20903 21975 . + . ID=gene-SNF32_07195;Name=SNF32_07195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07195;pseudo=true JAXGFV010000011.1 Protein Homology CDS 20903 21975 . + 0 ID=cds-SNF32_07195;Parent=gene-SNF32_07195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002293464.1;locus_tag=SNF32_07195;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank gene 22667 22816 . + . ID=gene-SNF32_07200;Name=SNF32_07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07200 JAXGFV010000011.1 GeneMarkS-2+ CDS 22667 22816 . + 0 ID=cds-MDY4307217.1;Parent=gene-SNF32_07200;Dbxref=NCBI_GP:MDY4307217.1;Name=MDY4307217.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07200;product=helix-turn-helix domain-containing protein;protein_id=MDY4307217.1;transl_table=11 JAXGFV010000011.1 Genbank gene 22789 22887 . + . ID=gene-SNF32_07205;Name=SNF32_07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07205 JAXGFV010000011.1 Protein Homology CDS 22789 22887 . + 0 ID=cds-MDY4307218.1;Parent=gene-SNF32_07205;Dbxref=NCBI_GP:MDY4307218.1;Name=MDY4307218.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.3;locus_tag=SNF32_07205;product=hypothetical protein;protein_id=MDY4307218.1;transl_table=11 JAXGFV010000011.1 Genbank gene 23104 23250 . - . ID=gene-SNF32_07210;Name=SNF32_07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07210 JAXGFV010000011.1 Protein Homology CDS 23104 23250 . - 0 ID=cds-MDY4307219.1;Parent=gene-SNF32_07210;Dbxref=NCBI_GP:MDY4307219.1;Name=MDY4307219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002387585.1;locus_tag=SNF32_07210;product=putative holin-like toxin;protein_id=MDY4307219.1;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 23576 23671 . - . ID=gene-SNF32_07215;Name=SNF32_07215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07215;pseudo=true JAXGFV010000011.1 Protein Homology CDS 23576 23671 . - 0 ID=cds-SNF32_07215;Parent=gene-SNF32_07215;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724701.1;locus_tag=SNF32_07215;product=putative holin-like toxin;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank gene 24494 25363 . + . ID=gene-SNF32_07220;Name=SNF32_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07220 JAXGFV010000011.1 GeneMarkS-2+ CDS 24494 25363 . + 0 ID=cds-MDY4307220.1;Parent=gene-SNF32_07220;Dbxref=NCBI_GP:MDY4307220.1;Name=MDY4307220.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07220;product=hypothetical protein;protein_id=MDY4307220.1;transl_table=11 JAXGFV010000011.1 Genbank gene 25589 26395 . + . ID=gene-SNF32_07225;Name=SNF32_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07225 JAXGFV010000011.1 GeneMarkS-2+ CDS 25589 26395 . + 0 ID=cds-MDY4307221.1;Parent=gene-SNF32_07225;Dbxref=NCBI_GP:MDY4307221.1;Name=MDY4307221.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07225;product=hypothetical protein;protein_id=MDY4307221.1;transl_table=11 JAXGFV010000011.1 Genbank gene 26630 26830 . + . ID=gene-SNF32_07230;Name=SNF32_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07230 JAXGFV010000011.1 GeneMarkS-2+ CDS 26630 26830 . + 0 ID=cds-MDY4307222.1;Parent=gene-SNF32_07230;Dbxref=NCBI_GP:MDY4307222.1;Name=MDY4307222.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07230;product=hypothetical protein;protein_id=MDY4307222.1;transl_table=11 JAXGFV010000011.1 Genbank gene 26917 27117 . + . ID=gene-SNF32_07235;Name=SNF32_07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07235 JAXGFV010000011.1 GeneMarkS-2+ CDS 26917 27117 . + 0 ID=cds-MDY4307223.1;Parent=gene-SNF32_07235;Dbxref=NCBI_GP:MDY4307223.1;Name=MDY4307223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07235;product=hypothetical protein;protein_id=MDY4307223.1;transl_table=11 JAXGFV010000011.1 Genbank gene 27578 27733 . + . ID=gene-SNF32_07240;Name=SNF32_07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07240 JAXGFV010000011.1 GeneMarkS-2+ CDS 27578 27733 . + 0 ID=cds-MDY4307224.1;Parent=gene-SNF32_07240;Dbxref=NCBI_GP:MDY4307224.1;Name=MDY4307224.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07240;product=hypothetical protein;protein_id=MDY4307224.1;transl_table=11 JAXGFV010000011.1 Genbank gene 27733 28149 . + . ID=gene-SNF32_07245;Name=SNF32_07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07245 JAXGFV010000011.1 Protein Homology CDS 27733 28149 . + 0 ID=cds-MDY4307225.1;Parent=gene-SNF32_07245;Dbxref=NCBI_GP:MDY4307225.1;Name=MDY4307225.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012301.3;locus_tag=SNF32_07245;product=response regulator transcription factor;protein_id=MDY4307225.1;transl_table=11 JAXGFV010000011.1 Genbank gene 28209 28343 . + . ID=gene-SNF32_07250;Name=SNF32_07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07250 JAXGFV010000011.1 GeneMarkS-2+ CDS 28209 28343 . + 0 ID=cds-MDY4307226.1;Parent=gene-SNF32_07250;Dbxref=NCBI_GP:MDY4307226.1;Name=MDY4307226.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07250;product=hypothetical protein;protein_id=MDY4307226.1;transl_table=11 JAXGFV010000011.1 Genbank gene 28566 28700 . + . ID=gene-SNF32_07255;Name=SNF32_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07255 JAXGFV010000011.1 GeneMarkS-2+ CDS 28566 28700 . + 0 ID=cds-MDY4307227.1;Parent=gene-SNF32_07255;Dbxref=NCBI_GP:MDY4307227.1;Name=MDY4307227.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07255;product=hypothetical protein;protein_id=MDY4307227.1;transl_table=11 JAXGFV010000011.1 Genbank gene 28795 29334 . + . ID=gene-SNF32_07260;Name=SNF32_07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07260 JAXGFV010000011.1 Protein Homology CDS 28795 29334 . + 0 ID=cds-MDY4307228.1;Parent=gene-SNF32_07260;Dbxref=NCBI_GP:MDY4307228.1;Name=MDY4307228.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019350.3;locus_tag=SNF32_07260;product=hypothetical protein;protein_id=MDY4307228.1;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 29399 29935 . + . ID=gene-SNF32_07265;Name=SNF32_07265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07265;pseudo=true JAXGFV010000011.1 Protein Homology CDS 29399 29935 . + 0 ID=cds-SNF32_07265;Parent=gene-SNF32_07265;Note=internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.3;locus_tag=SNF32_07265;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank gene 29932 30330 . + . ID=gene-SNF32_07270;Name=SNF32_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07270 JAXGFV010000011.1 GeneMarkS-2+ CDS 29932 30330 . + 0 ID=cds-MDY4307229.1;Parent=gene-SNF32_07270;Dbxref=NCBI_GP:MDY4307229.1;Name=MDY4307229.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07270;product=hypothetical protein;protein_id=MDY4307229.1;transl_table=11 JAXGFV010000011.1 Genbank gene 30342 30689 . + . ID=gene-SNF32_07275;Name=SNF32_07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07275 JAXGFV010000011.1 GeneMarkS-2+ CDS 30342 30689 . + 0 ID=cds-MDY4307230.1;Parent=gene-SNF32_07275;Dbxref=NCBI_GP:MDY4307230.1;Name=MDY4307230.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07275;product=hypothetical protein;protein_id=MDY4307230.1;transl_table=11 JAXGFV010000011.1 Genbank gene 30686 31048 . + . ID=gene-SNF32_07280;Name=SNF32_07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07280 JAXGFV010000011.1 GeneMarkS-2+ CDS 30686 31048 . + 0 ID=cds-MDY4307231.1;Parent=gene-SNF32_07280;Dbxref=NCBI_GP:MDY4307231.1;Name=MDY4307231.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07280;product=hypothetical protein;protein_id=MDY4307231.1;transl_table=11 JAXGFV010000011.1 Genbank gene 31039 31440 . + . ID=gene-SNF32_07285;Name=SNF32_07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07285 JAXGFV010000011.1 GeneMarkS-2+ CDS 31039 31440 . + 0 ID=cds-MDY4307232.1;Parent=gene-SNF32_07285;Dbxref=NCBI_GP:MDY4307232.1;Name=MDY4307232.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07285;product=hypothetical protein;protein_id=MDY4307232.1;transl_table=11 JAXGFV010000011.1 Genbank gene 31440 31826 . + . ID=gene-SNF32_07290;Name=SNF32_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07290 JAXGFV010000011.1 Protein Homology CDS 31440 31826 . + 0 ID=cds-MDY4307233.1;Parent=gene-SNF32_07290;Dbxref=NCBI_GP:MDY4307233.1;Name=MDY4307233.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF024110.3;locus_tag=SNF32_07290;product=ABC transporter permease;protein_id=MDY4307233.1;transl_table=11 JAXGFV010000011.1 Genbank gene 31805 31993 . + . ID=gene-SNF32_07295;Name=SNF32_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07295 JAXGFV010000011.1 GeneMarkS-2+ CDS 31805 31993 . + 0 ID=cds-MDY4307234.1;Parent=gene-SNF32_07295;Dbxref=NCBI_GP:MDY4307234.1;Name=MDY4307234.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07295;product=hypothetical protein;protein_id=MDY4307234.1;transl_table=11 JAXGFV010000011.1 Genbank gene 31993 32142 . + . ID=gene-SNF32_07300;Name=SNF32_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07300 JAXGFV010000011.1 GeneMarkS-2+ CDS 31993 32142 . + 0 ID=cds-MDY4307235.1;Parent=gene-SNF32_07300;Dbxref=NCBI_GP:MDY4307235.1;Name=MDY4307235.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07300;product=hypothetical protein;protein_id=MDY4307235.1;transl_table=11 JAXGFV010000011.1 Genbank gene 32136 32567 . + . ID=gene-SNF32_07305;Name=SNF32_07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07305 JAXGFV010000011.1 Protein Homology CDS 32136 32567 . + 0 ID=cds-MDY4307236.1;Parent=gene-SNF32_07305;Dbxref=NCBI_GP:MDY4307236.1;Name=MDY4307236.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF024091.3;locus_tag=SNF32_07305;product=ABC transporter permease;protein_id=MDY4307236.1;transl_table=11 JAXGFV010000011.1 Genbank gene 32831 33070 . + . ID=gene-SNF32_07310;Name=SNF32_07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07310 JAXGFV010000011.1 GeneMarkS-2+ CDS 32831 33070 . + 0 ID=cds-MDY4307237.1;Parent=gene-SNF32_07310;Dbxref=NCBI_GP:MDY4307237.1;Name=MDY4307237.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07310;product=hypothetical protein;protein_id=MDY4307237.1;transl_table=11 JAXGFV010000011.1 Genbank gene 33067 33375 . + . ID=gene-SNF32_07315;Name=SNF32_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07315 JAXGFV010000011.1 GeneMarkS-2+ CDS 33067 33375 . + 0 ID=cds-MDY4307238.1;Parent=gene-SNF32_07315;Dbxref=NCBI_GP:MDY4307238.1;Name=MDY4307238.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07315;product=hypothetical protein;protein_id=MDY4307238.1;transl_table=11 JAXGFV010000011.1 Genbank gene 33372 33494 . + . ID=gene-SNF32_07320;Name=SNF32_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07320 JAXGFV010000011.1 GeneMarkS-2+ CDS 33372 33494 . + 0 ID=cds-MDY4307239.1;Parent=gene-SNF32_07320;Dbxref=NCBI_GP:MDY4307239.1;Name=MDY4307239.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07320;product=hypothetical protein;protein_id=MDY4307239.1;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 34311 34611 . + . ID=gene-SNF32_07325;Name=rhaM;gbkey=Gene;gene=rhaM;gene_biotype=pseudogene;locus_tag=SNF32_07325;pseudo=true JAXGFV010000011.1 Protein Homology CDS 34311 34611 . + 0 ID=cds-SNF32_07325;Parent=gene-SNF32_07325;Note=frameshifted;Ontology_term=GO:0019301,GO:0062192;gbkey=CDS;gene=rhaM;go_function=L-rhamnose mutarotase activity|0062192||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002413485.1;locus_tag=SNF32_07325;product=L-rhamnose mutarotase;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 34685 36619 . - . ID=gene-SNF32_07330;Name=SNF32_07330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07330;pseudo=true JAXGFV010000011.1 Protein Homology CDS 34685 36619 . - 0 ID=cds-SNF32_07330;Parent=gene-SNF32_07330;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723904.1;locus_tag=SNF32_07330;product=ABC-F family ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 36834 37488 . + . ID=gene-SNF32_07335;Name=SNF32_07335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07335;pseudo=true JAXGFV010000011.1 Protein Homology CDS 36834 37488 . + 0 ID=cds-SNF32_07335;Parent=gene-SNF32_07335;Note=frameshifted;Ontology_term=GO:0045892,GO:0051775;gbkey=CDS;go_process=negative regulation of DNA-templated transcription|0045892||IEA,response to redox state|0051775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005878084.1;locus_tag=SNF32_07335;product=redox-sensing transcriptional repressor Rex;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 37737 39973 . + . ID=gene-SNF32_07340;Name=SNF32_07340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07340;pseudo=true JAXGFV010000011.1 Protein Homology CDS 37737 39973 . + 0 ID=cds-SNF32_07340;Parent=gene-SNF32_07340;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734799.1;locus_tag=SNF32_07340;product=excinuclease ABC subunit UvrA;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank gene 40026 40376 . - . ID=gene-SNF32_07345;Name=SNF32_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07345 JAXGFV010000011.1 Protein Homology CDS 40026 40376 . - 0 ID=cds-MDY4307240.1;Parent=gene-SNF32_07345;Dbxref=NCBI_GP:MDY4307240.1;Name=MDY4307240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010752609.1;locus_tag=SNF32_07345;product=thioredoxin family protein;protein_id=MDY4307240.1;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 40652 41573 . + . ID=gene-SNF32_07350;Name=SNF32_07350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07350;pseudo=true JAXGFV010000011.1 Protein Homology CDS 40652 41573 . + 0 ID=cds-SNF32_07350;Parent=gene-SNF32_07350;Note=frameshifted;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002306129.1;locus_tag=SNF32_07350;product=permease;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 41626 42251 . + . ID=gene-SNF32_07355;Name=SNF32_07355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07355;pseudo=true JAXGFV010000011.1 Protein Homology CDS 41626 42251 . + 0 ID=cds-SNF32_07355;Parent=gene-SNF32_07355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020881.3;locus_tag=SNF32_07355;product=TIGR03943 family protein;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank gene 42220 42423 . + . ID=gene-SNF32_07360;Name=SNF32_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07360 JAXGFV010000011.1 GeneMarkS-2+ CDS 42220 42423 . + 0 ID=cds-MDY4307241.1;Parent=gene-SNF32_07360;Dbxref=NCBI_GP:MDY4307241.1;Name=MDY4307241.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07360;product=hypothetical protein;protein_id=MDY4307241.1;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 42561 43048 . - . ID=gene-SNF32_07365;Name=SNF32_07365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07365;pseudo=true JAXGFV010000011.1 Protein Homology CDS 42561 43048 . - 0 ID=cds-SNF32_07365;Parent=gene-SNF32_07365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002344469.1;locus_tag=SNF32_07365;product=threonine/serine exporter family protein;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 43064 43815 . - . ID=gene-SNF32_07370;Name=SNF32_07370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07370;pseudo=true JAXGFV010000011.1 Protein Homology CDS 43064 43815 . - 0 ID=cds-SNF32_07370;Parent=gene-SNF32_07370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002289867.1;locus_tag=SNF32_07370;product=threonine/serine exporter family protein;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank gene 44039 44428 . + . ID=gene-SNF32_07375;Name=SNF32_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07375 JAXGFV010000011.1 Protein Homology CDS 44039 44428 . + 0 ID=cds-MDY4307242.1;Parent=gene-SNF32_07375;Dbxref=NCBI_GP:MDY4307242.1;Name=MDY4307242.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723840.1;locus_tag=SNF32_07375;product=TetR/AcrR family transcriptional regulator;protein_id=MDY4307242.1;transl_table=11 JAXGFV010000011.1 Genbank gene 44432 44704 . + . ID=gene-SNF32_07380;Name=SNF32_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07380 JAXGFV010000011.1 GeneMarkS-2+ CDS 44432 44704 . + 0 ID=cds-MDY4307243.1;Parent=gene-SNF32_07380;Dbxref=NCBI_GP:MDY4307243.1;Name=MDY4307243.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07380;product=hypothetical protein;protein_id=MDY4307243.1;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 45091 45812 . + . ID=gene-SNF32_07385;Name=SNF32_07385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07385;pseudo=true JAXGFV010000011.1 Protein Homology CDS 45091 45812 . + 0 ID=cds-SNF32_07385;Parent=gene-SNF32_07385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734807.1;locus_tag=SNF32_07385;product=DNA/RNA non-specific endonuclease;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank gene 46069 46335 . + . ID=gene-SNF32_07390;Name=SNF32_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07390 JAXGFV010000011.1 Protein Homology CDS 46069 46335 . + 0 ID=cds-MDY4307244.1;Parent=gene-SNF32_07390;Dbxref=NCBI_GP:MDY4307244.1;Name=MDY4307244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002290885.1;locus_tag=SNF32_07390;product=IreB family regulatory phosphoprotein;protein_id=MDY4307244.1;transl_table=11 JAXGFV010000011.1 Genbank gene 46332 46763 . + . ID=gene-SNF32_07395;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=SNF32_07395 JAXGFV010000011.1 Protein Homology CDS 46332 46763 . + 0 ID=cds-MDY4307245.1;Parent=gene-SNF32_07395;Dbxref=NCBI_GP:MDY4307245.1;Name=MDY4307245.1;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002345289.1;locus_tag=SNF32_07395;product=Holliday junction resolvase RuvX;protein_id=MDY4307245.1;transl_table=11 JAXGFV010000011.1 Genbank gene 46785 47090 . + . ID=gene-SNF32_07400;Name=SNF32_07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07400 JAXGFV010000011.1 Protein Homology CDS 46785 47090 . + 0 ID=cds-MDY4307246.1;Parent=gene-SNF32_07400;Dbxref=NCBI_GP:MDY4307246.1;Name=MDY4307246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002419177.1;locus_tag=SNF32_07400;product=DUF1292 domain-containing protein;protein_id=MDY4307246.1;transl_table=11 JAXGFV010000011.1 Genbank gene 47239 47682 . + . ID=gene-SNF32_07405;Name=SNF32_07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07405 JAXGFV010000011.1 Protein Homology CDS 47239 47682 . + 0 ID=cds-MDY4307247.1;Parent=gene-SNF32_07405;Dbxref=NCBI_GP:MDY4307247.1;Name=MDY4307247.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723845.1;locus_tag=SNF32_07405;product=GNAT family N-acetyltransferase;protein_id=MDY4307247.1;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 47744 49065 . - . ID=gene-SNF32_07410;Name=SNF32_07410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07410;pseudo=true JAXGFV010000011.1 Protein Homology CDS 47744 49065 . - 0 ID=cds-SNF32_07410;Parent=gene-SNF32_07410;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010718665.1;locus_tag=SNF32_07410;product=2-hydroxycarboxylate transporter family protein;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank gene 49328 50968 . - . ID=gene-SNF32_07415;Name=SNF32_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07415 JAXGFV010000011.1 Protein Homology CDS 49328 50968 . - 0 ID=cds-MDY4307248.1;Parent=gene-SNF32_07415;Dbxref=NCBI_GP:MDY4307248.1;Name=MDY4307248.1;Ontology_term=GO:0043464,GO:0043883;gbkey=CDS;go_function=malolactic enzyme activity|0043883||IEA;go_process=malolactic fermentation|0043464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734812.1;locus_tag=SNF32_07415;product=malolactic enzyme;protein_id=MDY4307248.1;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 51174 52561 . - . ID=gene-SNF32_07420;Name=SNF32_07420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07420;pseudo=true JAXGFV010000011.1 Protein Homology CDS 51174 52561 . - 0 ID=cds-SNF32_07420;Parent=gene-SNF32_07420;Note=frameshifted;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734813.1;locus_tag=SNF32_07420;product=PLP-dependent aminotransferase family protein;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 52653 53609 . + . ID=gene-SNF32_07425;Name=SNF32_07425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07425;pseudo=true JAXGFV010000011.1 Protein Homology CDS 52653 53609 . + 0 ID=cds-SNF32_07425;Parent=gene-SNF32_07425;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722451.1;locus_tag=SNF32_07425;product=ornithine cyclodeaminase family protein;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 53617 54396 . + . ID=gene-SNF32_07430;Name=SNF32_07430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07430;pseudo=true JAXGFV010000011.1 Protein Homology CDS 53617 54396 . + 0 ID=cds-SNF32_07430;Parent=gene-SNF32_07430;Note=frameshifted;Ontology_term=GO:0009058,GO:0016853,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isomerase activity|0016853||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002295114.1;locus_tag=SNF32_07430;product=PhzF family phenazine biosynthesis protein;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 54598 55700 . - . ID=gene-SNF32_07435;Name=SNF32_07435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07435;pseudo=true JAXGFV010000011.1 Protein Homology CDS 54598 55700 . - 0 ID=cds-SNF32_07435;Parent=gene-SNF32_07435;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734816.1;locus_tag=SNF32_07435;product=alpha-hydroxy-acid oxidizing protein;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank gene 56019 56459 . - . ID=gene-SNF32_07440;Name=SNF32_07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07440 JAXGFV010000011.1 Protein Homology CDS 56019 56459 . - 0 ID=cds-MDY4307249.1;Parent=gene-SNF32_07440;Dbxref=NCBI_GP:MDY4307249.1;Name=MDY4307249.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012669.3;locus_tag=SNF32_07440;product=hypothetical protein;protein_id=MDY4307249.1;transl_table=11 JAXGFV010000011.1 Genbank gene 56387 56551 . - . ID=gene-SNF32_07445;Name=SNF32_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07445 JAXGFV010000011.1 GeneMarkS-2+ CDS 56387 56551 . - 0 ID=cds-MDY4307250.1;Parent=gene-SNF32_07445;Dbxref=NCBI_GP:MDY4307250.1;Name=MDY4307250.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07445;product=hypothetical protein;protein_id=MDY4307250.1;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 56571 56632 . - . ID=gene-SNF32_07450;Name=SNF32_07450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07450;pseudo=true JAXGFV010000011.1 Protein Homology CDS 56571 56632 . - 0 ID=cds-SNF32_07450;Parent=gene-SNF32_07450;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF019884.3;locus_tag=SNF32_07450;product=DeoR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 56873 57950 . + . ID=gene-SNF32_07455;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=pseudogene;locus_tag=SNF32_07455;pseudo=true JAXGFV010000011.1 Protein Homology CDS 56873 57950 . + 0 ID=cds-SNF32_07455;Parent=gene-SNF32_07455;Note=frameshifted;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005878331.1;locus_tag=SNF32_07455;product=L-ascorbate 6-phosphate lactonase;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 58102 58556 . + . ID=gene-SNF32_07460;Name=SNF32_07460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07460;pseudo=true JAXGFV010000011.1 Protein Homology CDS 58102 58556 . + 0 ID=cds-SNF32_07460;Parent=gene-SNF32_07460;Note=frameshifted;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722447.1;locus_tag=SNF32_07460;product=PTS sugar transporter subunit IIA;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 58738 60223 . + . ID=gene-SNF32_07465;Name=SNF32_07465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07465;pseudo=true JAXGFV010000011.1 Protein Homology CDS 58738 60223 . + 0 ID=cds-SNF32_07465;Parent=gene-SNF32_07465;Note=frameshifted;Ontology_term=GO:0009401,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010746174.1;locus_tag=SNF32_07465;product=PTS ascorbate transporter subunit IIC;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank gene 60239 60550 . + . ID=gene-SNF32_07470;Name=SNF32_07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07470 JAXGFV010000011.1 Protein Homology CDS 60239 60550 . + 0 ID=cds-MDY4307251.1;Parent=gene-SNF32_07470;Dbxref=NCBI_GP:MDY4307251.1;Name=MDY4307251.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722445.1;locus_tag=SNF32_07470;product=PTS sugar transporter subunit IIB;protein_id=MDY4307251.1;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 60551 61190 . + . ID=gene-SNF32_07475;Name=SNF32_07475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07475;pseudo=true JAXGFV010000011.1 Protein Homology CDS 60551 61190 . + 0 ID=cds-SNF32_07475;Parent=gene-SNF32_07475;Note=frameshifted;Ontology_term=GO:0000287,GO:0016831;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722444.1;locus_tag=SNF32_07475;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 61192 62040 . + . ID=gene-SNF32_07480;Name=SNF32_07480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07480;pseudo=true JAXGFV010000011.1 Protein Homology CDS 61192 62040 . + 0 ID=cds-SNF32_07480;Parent=gene-SNF32_07480;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734824.1;locus_tag=SNF32_07480;product=L-ribulose-5-phosphate 3-epimerase;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 62210 63276 . + . ID=gene-SNF32_07485;Name=SNF32_07485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07485;pseudo=true JAXGFV010000011.1 Protein Homology CDS 62210 63276 . + 0 ID=cds-SNF32_07485;Parent=gene-SNF32_07485;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016631334.1;locus_tag=SNF32_07485;product=ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 63292 63992 . + . ID=gene-SNF32_07490;Name=SNF32_07490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07490;pseudo=true JAXGFV010000011.1 Protein Homology CDS 63292 63992 . + 0 ID=cds-SNF32_07490;Parent=gene-SNF32_07490;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734826.1;locus_tag=SNF32_07490;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 63973 64546 . + . ID=gene-SNF32_07495;Name=SNF32_07495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07495;pseudo=true JAXGFV010000011.1 Protein Homology CDS 63973 64546 . + 0 ID=cds-SNF32_07495;Parent=gene-SNF32_07495;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734827.1;locus_tag=SNF32_07495;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000011.1 Genbank pseudogene 65107 67055 . + . ID=gene-SNF32_07500;Name=SNF32_07500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07500;pseudo=true JAXGFV010000011.1 Protein Homology CDS 65107 67055 . + 0 ID=cds-SNF32_07500;Parent=gene-SNF32_07500;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002316438.1;locus_tag=SNF32_07500;product=glycosyl hydrolase family 18 protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000110.1 1 1862 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000110.1 Genbank region 1 1862 . + . ID=JAXGFV010000110.1:1..1862;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000110.1 Genbank gene 1 1801 . - . ID=gene-SNF32_17050;Name=SNF32_17050;gbkey=Gene;gene_biotype=rRNA;locus_tag=SNF32_17050;partial=true;start_range=.,1 JAXGFV010000110.1 cmsearch rRNA 1 1801 . - . ID=rna-SNF32_17050;Parent=gene-SNF32_17050;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=SNF32_17050;partial=true;product=23S ribosomal RNA;start_range=.,1 JAXGFV010000110.1 cmsearch exon 1 1801 . - . ID=exon-SNF32_17050-1;Parent=rna-SNF32_17050;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=SNF32_17050;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region JAXGFV010000111.1 1 1799 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000111.1 Genbank region 1 1799 . + . ID=JAXGFV010000111.1:1..1799;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000111.1 Genbank pseudogene 1 1799 . - . ID=gene-SNF32_17055;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=pseudogene;locus_tag=SNF32_17055;pseudo=true JAXGFV010000111.1 Protein Homology CDS 1 1799 . - 0 ID=cds-SNF32_17055;Parent=gene-SNF32_17055;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002340613.1;locus_tag=SNF32_17055;product=transketolase;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000112.1 1 1591 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000112.1 Genbank region 1 1591 . + . ID=JAXGFV010000112.1:1..1591;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000112.1 Genbank gene 135 437 . - . ID=gene-SNF32_17060;Name=SNF32_17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17060 JAXGFV010000112.1 Protein Homology CDS 135 437 . - 0 ID=cds-MDY4308212.1;Parent=gene-SNF32_17060;Dbxref=NCBI_GP:MDY4308212.1;Name=MDY4308212.1;Ontology_term=GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002406010.1;locus_tag=SNF32_17060;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=MDY4308212.1;transl_table=11 JAXGFV010000112.1 Genbank gene 475 705 . - . ID=gene-SNF32_17065;Name=SNF32_17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17065 JAXGFV010000112.1 Protein Homology CDS 475 705 . - 0 ID=cds-MDY4308213.1;Parent=gene-SNF32_17065;Dbxref=NCBI_GP:MDY4308213.1;Name=MDY4308213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008265502.1;locus_tag=SNF32_17065;product=AbrB family transcriptional regulator;protein_id=MDY4308213.1;transl_table=11 JAXGFV010000112.1 Genbank pseudogene 943 1529 . + . ID=gene-SNF32_17070;Name=SNF32_17070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_17070;pseudo=true JAXGFV010000112.1 Protein Homology CDS 943 1529 . + 0 ID=cds-SNF32_17070;Parent=gene-SNF32_17070;Note=frameshifted;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629975.1;locus_tag=SNF32_17070;product=recombinase family protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000113.1 1 1520 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000113.1 Genbank region 1 1520 . + . ID=JAXGFV010000113.1:1..1520;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000113.1 Genbank gene 1 428 . - . ID=gene-SNF32_17075;Name=SNF32_17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17075;partial=true;start_range=.,1 JAXGFV010000113.1 Protein Homology CDS 1 428 . - 0 ID=cds-MDY4308214.1;Parent=gene-SNF32_17075;Dbxref=NCBI_GP:MDY4308214.1;Name=MDY4308214.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016628205.1;locus_tag=SNF32_17075;partial=true;product=PTS transporter subunit EIIC;protein_id=MDY4308214.1;start_range=.,1;transl_table=11 JAXGFV010000113.1 Genbank pseudogene 464 750 . - . ID=gene-SNF32_17080;Name=SNF32_17080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_17080;pseudo=true JAXGFV010000113.1 Protein Homology CDS 464 750 . - 0 ID=cds-SNF32_17080;Parent=gene-SNF32_17080;Note=frameshifted;Ontology_term=GO:0009401,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016174680.1;locus_tag=SNF32_17080;product=PTS lactose/cellobiose transporter subunit IIA;pseudo=true;transl_table=11 JAXGFV010000113.1 Genbank pseudogene 803 1122 . - . ID=gene-SNF32_17085;Name=SNF32_17085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_17085;pseudo=true JAXGFV010000113.1 Protein Homology CDS 803 1122 . - 0 ID=cds-SNF32_17085;Parent=gene-SNF32_17085;Note=frameshifted;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002292778.1;locus_tag=SNF32_17085;product=PTS sugar transporter subunit IIB;pseudo=true;transl_table=11 JAXGFV010000113.1 Genbank gene 1328 1480 . - . ID=gene-SNF32_17090;Name=SNF32_17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17090 JAXGFV010000113.1 GeneMarkS-2+ CDS 1328 1480 . - 0 ID=cds-MDY4308215.1;Parent=gene-SNF32_17090;Dbxref=NCBI_GP:MDY4308215.1;Name=MDY4308215.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_17090;product=hypothetical protein;protein_id=MDY4308215.1;transl_table=11 ##sequence-region JAXGFV010000114.1 1 1457 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000114.1 Genbank region 1 1457 . + . ID=JAXGFV010000114.1:1..1457;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000114.1 Genbank gene 1 1457 . - . ID=gene-SNF32_17095;Name=SNF32_17095;gbkey=Gene;gene_biotype=rRNA;locus_tag=SNF32_17095;partial=true;start_range=.,1 JAXGFV010000114.1 cmsearch rRNA 1 1457 . - . ID=rna-SNF32_17095;Parent=gene-SNF32_17095;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=SNF32_17095;partial=true;product=16S ribosomal RNA;start_range=.,1 JAXGFV010000114.1 cmsearch exon 1 1457 . - . ID=exon-SNF32_17095-1;Parent=rna-SNF32_17095;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=SNF32_17095;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region JAXGFV010000115.1 1 1456 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000115.1 Genbank region 1 1456 . + . ID=JAXGFV010000115.1:1..1456;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000115.1 Genbank pseudogene 15 728 . - . ID=gene-SNF32_17100;Name=SNF32_17100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_17100;pseudo=true JAXGFV010000115.1 Protein Homology CDS 15 728 . - 0 ID=cds-SNF32_17100;Parent=gene-SNF32_17100;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012318.3;locus_tag=SNF32_17100;product=trypsin-like peptidase domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000115.1 Genbank gene 1149 1456 . - . ID=gene-SNF32_17105;Name=SNF32_17105;end_range=1456,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17105;partial=true JAXGFV010000115.1 Protein Homology CDS 1149 1456 . - 2 ID=cds-MDY4308216.1;Parent=gene-SNF32_17105;Dbxref=NCBI_GP:MDY4308216.1;Name=MDY4308216.1;end_range=1456,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016612408.1;locus_tag=SNF32_17105;partial=true;product=hypothetical protein;protein_id=MDY4308216.1;transl_table=11 ##sequence-region JAXGFV010000116.1 1 1444 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000116.1 Genbank region 1 1444 . + . ID=JAXGFV010000116.1:1..1444;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000116.1 Genbank gene 119 925 . - . ID=gene-SNF32_17110;Name=SNF32_17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17110 JAXGFV010000116.1 Protein Homology CDS 119 925 . - 0 ID=cds-MDY4308217.1;Parent=gene-SNF32_17110;Dbxref=NCBI_GP:MDY4308217.1;Name=MDY4308217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016621810.1;locus_tag=SNF32_17110;product=WxL domain-containing protein;protein_id=MDY4308217.1;transl_table=11 JAXGFV010000116.1 Genbank gene 950 1258 . - . ID=gene-SNF32_17115;Name=SNF32_17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17115 JAXGFV010000116.1 Protein Homology CDS 950 1258 . - 0 ID=cds-MDY4308218.1;Parent=gene-SNF32_17115;Dbxref=NCBI_GP:MDY4308218.1;Name=MDY4308218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736442.1;locus_tag=SNF32_17115;product=LPXTG cell wall anchor domain-containing protein;protein_id=MDY4308218.1;transl_table=11 ##sequence-region JAXGFV010000117.1 1 1440 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000117.1 Genbank region 1 1440 . + . ID=JAXGFV010000117.1:1..1440;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000117.1 Genbank gene 1 248 . - . ID=gene-SNF32_17120;Name=SNF32_17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17120;partial=true;start_range=.,1 JAXGFV010000117.1 Protein Homology CDS 1 248 . - 0 ID=cds-MDY4308219.1;Parent=gene-SNF32_17120;Dbxref=NCBI_GP:MDY4308219.1;Name=MDY4308219.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002982458.1;locus_tag=SNF32_17120;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=MDY4308219.1;start_range=.,1;transl_table=11 JAXGFV010000117.1 Genbank gene 390 1440 . - . ID=gene-SNF32_17125;Name=SNF32_17125;end_range=1440,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17125;partial=true JAXGFV010000117.1 Protein Homology CDS 390 1440 . - 1 ID=cds-MDY4308220.1;Parent=gene-SNF32_17125;Dbxref=NCBI_GP:MDY4308220.1;Name=MDY4308220.1;end_range=1440,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024829.3;locus_tag=SNF32_17125;partial=true;product=efflux RND transporter periplasmic adaptor subunit;protein_id=MDY4308220.1;transl_table=11 ##sequence-region JAXGFV010000118.1 1 1388 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000118.1 Genbank region 1 1388 . + . ID=JAXGFV010000118.1:1..1388;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000118.1 Genbank pseudogene 220 1388 . + . ID=gene-SNF32_17130;Name=SNF32_17130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_17130;pseudo=true JAXGFV010000118.1 Protein Homology CDS 220 1388 . + 0 ID=cds-SNF32_17130;Parent=gene-SNF32_17130;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002359213.1;locus_tag=SNF32_17130;product=adenylosuccinate synthase;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000119.1 1 1363 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000119.1 Genbank region 1 1363 . + . ID=JAXGFV010000119.1:1..1363;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000119.1 Genbank gene 316 549 . - . ID=gene-SNF32_17135;Name=SNF32_17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17135 JAXGFV010000119.1 Protein Homology CDS 316 549 . - 0 ID=cds-MDY4308221.1;Parent=gene-SNF32_17135;Dbxref=NCBI_GP:MDY4308221.1;Name=MDY4308221.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.3;locus_tag=SNF32_17135;product=ATP-binding cassette domain-containing protein;protein_id=MDY4308221.1;transl_table=11 JAXGFV010000119.1 Genbank gene 735 902 . - . ID=gene-SNF32_17140;Name=SNF32_17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17140 JAXGFV010000119.1 Protein Homology CDS 735 902 . - 0 ID=cds-MDY4308222.1;Parent=gene-SNF32_17140;Dbxref=NCBI_GP:MDY4308222.1;Name=MDY4308222.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012869.3;locus_tag=SNF32_17140;product=ABC transporter transmembrane domain-containing protein;protein_id=MDY4308222.1;transl_table=11 ##sequence-region JAXGFV010000012.1 1 63629 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000012.1 Genbank region 1 63629 . + . ID=JAXGFV010000012.1:1..63629;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000012.1 Genbank gene 15 479 . + . ID=gene-SNF32_07505;Name=SNF32_07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07505 JAXGFV010000012.1 Protein Homology CDS 15 479 . + 0 ID=cds-MDY4307252.1;Parent=gene-SNF32_07505;Dbxref=NCBI_GP:MDY4307252.1;Name=MDY4307252.1;Ontology_term=GO:0008168,GO:0008757;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002299582.1;locus_tag=SNF32_07505;product=methyltransferase domain-containing protein;protein_id=MDY4307252.1;transl_table=11 JAXGFV010000012.1 Genbank gene 479 769 . + . ID=gene-SNF32_07510;Name=SNF32_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07510 JAXGFV010000012.1 GeneMarkS-2+ CDS 479 769 . + 0 ID=cds-MDY4307253.1;Parent=gene-SNF32_07510;Dbxref=NCBI_GP:MDY4307253.1;Name=MDY4307253.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07510;product=hypothetical protein;protein_id=MDY4307253.1;transl_table=11 JAXGFV010000012.1 Genbank gene 795 1016 . + . ID=gene-SNF32_07515;Name=SNF32_07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07515 JAXGFV010000012.1 Protein Homology CDS 795 1016 . + 0 ID=cds-MDY4307254.1;Parent=gene-SNF32_07515;Dbxref=NCBI_GP:MDY4307254.1;Name=MDY4307254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010746229.1;locus_tag=SNF32_07515;product=hypothetical protein;protein_id=MDY4307254.1;transl_table=11 JAXGFV010000012.1 Genbank gene 1147 1344 . + . ID=gene-SNF32_07520;Name=SNF32_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07520 JAXGFV010000012.1 GeneMarkS-2+ CDS 1147 1344 . + 0 ID=cds-MDY4307255.1;Parent=gene-SNF32_07520;Dbxref=NCBI_GP:MDY4307255.1;Name=MDY4307255.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07520;product=hypothetical protein;protein_id=MDY4307255.1;transl_table=11 JAXGFV010000012.1 Genbank gene 1341 1472 . + . ID=gene-SNF32_07525;Name=SNF32_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07525 JAXGFV010000012.1 GeneMarkS-2+ CDS 1341 1472 . + 0 ID=cds-MDY4307256.1;Parent=gene-SNF32_07525;Dbxref=NCBI_GP:MDY4307256.1;Name=MDY4307256.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07525;product=hypothetical protein;protein_id=MDY4307256.1;transl_table=11 JAXGFV010000012.1 Genbank gene 1605 1823 . + . ID=gene-SNF32_07530;Name=SNF32_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07530 JAXGFV010000012.1 Protein Homology CDS 1605 1823 . + 0 ID=cds-MDY4307257.1;Parent=gene-SNF32_07530;Dbxref=NCBI_GP:MDY4307257.1;Name=MDY4307257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002402253.1;locus_tag=SNF32_07530;product=hypothetical protein;protein_id=MDY4307257.1;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 1835 2122 . + . ID=gene-SNF32_07535;Name=SNF32_07535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07535;pseudo=true JAXGFV010000012.1 Protein Homology CDS 1835 2122 . + 0 ID=cds-SNF32_07535;Parent=gene-SNF32_07535;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177548.1;locus_tag=SNF32_07535;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 2154 2404 . - . ID=gene-SNF32_07540;Name=SNF32_07540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07540;pseudo=true JAXGFV010000012.1 Protein Homology CDS 2154 2404 . - 0 ID=cds-SNF32_07540;Parent=gene-SNF32_07540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177549.1;locus_tag=SNF32_07540;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 2701 3176 . + . ID=gene-SNF32_07545;Name=SNF32_07545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07545;pseudo=true JAXGFV010000012.1 Protein Homology CDS 2701 3176 . + 0 ID=cds-SNF32_07545;Parent=gene-SNF32_07545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002303026.1;locus_tag=SNF32_07545;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank gene 3738 3881 . + . ID=gene-SNF32_07550;Name=SNF32_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07550 JAXGFV010000012.1 GeneMarkS-2+ CDS 3738 3881 . + 0 ID=cds-MDY4307258.1;Parent=gene-SNF32_07550;Dbxref=NCBI_GP:MDY4307258.1;Name=MDY4307258.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07550;product=hypothetical protein;protein_id=MDY4307258.1;transl_table=11 JAXGFV010000012.1 Genbank gene 4678 4905 . + . ID=gene-SNF32_07555;Name=SNF32_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07555 JAXGFV010000012.1 Protein Homology CDS 4678 4905 . + 0 ID=cds-MDY4307259.1;Parent=gene-SNF32_07555;Dbxref=NCBI_GP:MDY4307259.1;Name=MDY4307259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002337266.1;locus_tag=SNF32_07555;product=hypothetical protein;protein_id=MDY4307259.1;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 4959 5194 . + . ID=gene-SNF32_07560;Name=SNF32_07560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07560;pseudo=true JAXGFV010000012.1 Protein Homology CDS 4959 5194 . + 0 ID=cds-SNF32_07560;Parent=gene-SNF32_07560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736758.1;locus_tag=SNF32_07560;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 5178 5497 . + . ID=gene-SNF32_07565;Name=SNF32_07565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07565;pseudo=true JAXGFV010000012.1 Protein Homology CDS 5178 5497 . + 0 ID=cds-SNF32_07565;Parent=gene-SNF32_07565;Note=frameshifted;Ontology_term=GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002397761.1;locus_tag=SNF32_07565;product=HNH endonuclease signature motif containing protein;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank gene 5488 5724 . + . ID=gene-SNF32_07570;Name=SNF32_07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07570 JAXGFV010000012.1 Protein Homology CDS 5488 5724 . + 0 ID=cds-MDY4307260.1;Parent=gene-SNF32_07570;Dbxref=NCBI_GP:MDY4307260.1;Name=MDY4307260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736760.1;locus_tag=SNF32_07570;product=hypothetical protein;protein_id=MDY4307260.1;transl_table=11 JAXGFV010000012.1 Genbank gene 5861 6172 . + . ID=gene-SNF32_07575;Name=SNF32_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07575 JAXGFV010000012.1 Protein Homology CDS 5861 6172 . + 0 ID=cds-MDY4307261.1;Parent=gene-SNF32_07575;Dbxref=NCBI_GP:MDY4307261.1;Name=MDY4307261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736761.1;locus_tag=SNF32_07575;product=P27 family phage terminase small subunit;protein_id=MDY4307261.1;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 6169 7842 . + . ID=gene-SNF32_07580;Name=SNF32_07580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07580;pseudo=true JAXGFV010000012.1 Protein Homology CDS 6169 7842 . + 0 ID=cds-SNF32_07580;Parent=gene-SNF32_07580;Note=frameshifted;Ontology_term=GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003127789.1;locus_tag=SNF32_07580;product=terminase TerL endonuclease subunit;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank gene 7954 8250 . + . ID=gene-SNF32_07585;Name=SNF32_07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07585 JAXGFV010000012.1 GeneMarkS-2+ CDS 7954 8250 . + 0 ID=cds-MDY4307262.1;Parent=gene-SNF32_07585;Dbxref=NCBI_GP:MDY4307262.1;Name=MDY4307262.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07585;product=hypothetical protein;protein_id=MDY4307262.1;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 9042 10212 . + . ID=gene-SNF32_07590;Name=SNF32_07590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07590;pseudo=true JAXGFV010000012.1 Protein Homology CDS 9042 10212 . + 0 ID=cds-SNF32_07590;Parent=gene-SNF32_07590;Note=frameshifted;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736764.1;locus_tag=SNF32_07590;product=phage portal protein;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 10199 10902 . + . ID=gene-SNF32_07595;Name=SNF32_07595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07595;pseudo=true JAXGFV010000012.1 Protein Homology CDS 10199 10902 . + 0 ID=cds-SNF32_07595;Parent=gene-SNF32_07595;Note=frameshifted;Ontology_term=GO:0006508,GO:0004176,GO:0004252;gbkey=CDS;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010749273.1;locus_tag=SNF32_07595;product=Clp protease ClpP;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 10907 12083 . + . ID=gene-SNF32_07600;Name=SNF32_07600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07600;pseudo=true JAXGFV010000012.1 Protein Homology CDS 10907 12083 . + 0 ID=cds-SNF32_07600;Parent=gene-SNF32_07600;Note=frameshifted;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016631663.1;locus_tag=SNF32_07600;product=phage major capsid protein;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank gene 12101 12223 . + . ID=gene-SNF32_07605;Name=SNF32_07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07605 JAXGFV010000012.1 Protein Homology CDS 12101 12223 . + 0 ID=cds-MDY4307263.1;Parent=gene-SNF32_07605;Dbxref=NCBI_GP:MDY4307263.1;Name=MDY4307263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010720115.1;locus_tag=SNF32_07605;product=HeH/LEM domain-containing protein;protein_id=MDY4307263.1;transl_table=11 JAXGFV010000012.1 Genbank gene 12227 12505 . + . ID=gene-SNF32_07610;Name=SNF32_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07610 JAXGFV010000012.1 Protein Homology CDS 12227 12505 . + 0 ID=cds-MDY4307264.1;Parent=gene-SNF32_07610;Dbxref=NCBI_GP:MDY4307264.1;Name=MDY4307264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736767.1;locus_tag=SNF32_07610;product=phage gp6-like head-tail connector protein;protein_id=MDY4307264.1;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 12495 12856 . + . ID=gene-SNF32_07615;Name=SNF32_07615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07615;pseudo=true JAXGFV010000012.1 Protein Homology CDS 12495 12856 . + 0 ID=cds-SNF32_07615;Parent=gene-SNF32_07615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002371762.1;locus_tag=SNF32_07615;product=phage head-tail adapter protein;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank gene 12870 13274 . + . ID=gene-SNF32_07620;Name=SNF32_07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07620 JAXGFV010000012.1 Protein Homology CDS 12870 13274 . + 0 ID=cds-MDY4307265.1;Parent=gene-SNF32_07620;Dbxref=NCBI_GP:MDY4307265.1;Name=MDY4307265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002337486.1;locus_tag=SNF32_07620;product=hypothetical protein;protein_id=MDY4307265.1;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 13271 13680 . + . ID=gene-SNF32_07625;Name=SNF32_07625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07625;pseudo=true JAXGFV010000012.1 Protein Homology CDS 13271 13680 . + 0 ID=cds-SNF32_07625;Parent=gene-SNF32_07625;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002318063.1;locus_tag=SNF32_07625;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 13742 14339 . + . ID=gene-SNF32_07630;Name=SNF32_07630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07630;pseudo=true JAXGFV010000012.1 Protein Homology CDS 13742 14339 . + 0 ID=cds-SNF32_07630;Parent=gene-SNF32_07630;Note=frameshifted;Ontology_term=GO:0019068,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736718.1;locus_tag=SNF32_07630;product=major tail protein;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 14575 14891 . + . ID=gene-SNF32_07635;Name=SNF32_07635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07635;pseudo=true JAXGFV010000012.1 Protein Homology CDS 14575 14891 . + 0 ID=cds-SNF32_07635;Parent=gene-SNF32_07635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002306383.1;locus_tag=SNF32_07635;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 15078 21739 . + . ID=gene-SNF32_07640;Name=SNF32_07640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07640;pseudo=true JAXGFV010000012.1 Protein Homology CDS 15078 21739 . + 0 ID=cds-SNF32_07640;Parent=gene-SNF32_07640;Note=frameshifted;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002318068.1;locus_tag=SNF32_07640;product=phage tail tape measure protein;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 21743 22566 . + . ID=gene-SNF32_07645;Name=SNF32_07645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07645;pseudo=true JAXGFV010000012.1 Protein Homology CDS 21743 22566 . + 0 ID=cds-SNF32_07645;Parent=gene-SNF32_07645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002306386.1;locus_tag=SNF32_07645;product=phage tail family protein;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 22571 23585 . + . ID=gene-SNF32_07650;Name=SNF32_07650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07650;pseudo=true JAXGFV010000012.1 Protein Homology CDS 22571 23585 . + 0 ID=cds-SNF32_07650;Parent=gene-SNF32_07650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736706.1;locus_tag=SNF32_07650;product=phage tail protein;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 23585 24633 . + . ID=gene-SNF32_07655;Name=SNF32_07655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07655;pseudo=true JAXGFV010000012.1 Protein Homology CDS 23585 24633 . + 0 ID=cds-SNF32_07655;Parent=gene-SNF32_07655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016631250.1;locus_tag=SNF32_07655;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank gene 24633 25223 . + . ID=gene-SNF32_07660;Name=SNF32_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07660 JAXGFV010000012.1 Protein Homology CDS 24633 25223 . + 0 ID=cds-MDY4307266.1;Parent=gene-SNF32_07660;Dbxref=NCBI_GP:MDY4307266.1;Name=MDY4307266.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022117.3;locus_tag=SNF32_07660;product=BppU family phage baseplate upper protein;protein_id=MDY4307266.1;transl_table=11 JAXGFV010000012.1 Genbank gene 26136 26870 . + . ID=gene-SNF32_07665;Name=SNF32_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07665 JAXGFV010000012.1 GeneMarkS-2+ CDS 26136 26870 . + 0 ID=cds-MDY4307267.1;Parent=gene-SNF32_07665;Dbxref=NCBI_GP:MDY4307267.1;Name=MDY4307267.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07665;product=hypothetical protein;protein_id=MDY4307267.1;transl_table=11 JAXGFV010000012.1 Genbank gene 26883 27338 . + . ID=gene-SNF32_07670;Name=SNF32_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07670 JAXGFV010000012.1 Protein Homology CDS 26883 27338 . + 0 ID=cds-MDY4307268.1;Parent=gene-SNF32_07670;Dbxref=NCBI_GP:MDY4307268.1;Name=MDY4307268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016624527.1;locus_tag=SNF32_07670;product=hypothetical protein;protein_id=MDY4307268.1;transl_table=11 JAXGFV010000012.1 Genbank gene 27331 27459 . + . ID=gene-SNF32_07675;Name=SNF32_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07675 JAXGFV010000012.1 Protein Homology CDS 27331 27459 . + 0 ID=cds-MDY4307269.1;Parent=gene-SNF32_07675;Dbxref=NCBI_GP:MDY4307269.1;Name=MDY4307269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736701.1;locus_tag=SNF32_07675;product=XkdX family protein;protein_id=MDY4307269.1;transl_table=11 JAXGFV010000012.1 Genbank gene 27512 27799 . + . ID=gene-SNF32_07680;Name=SNF32_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07680 JAXGFV010000012.1 Protein Homology CDS 27512 27799 . + 0 ID=cds-MDY4307270.1;Parent=gene-SNF32_07680;Dbxref=NCBI_GP:MDY4307270.1;Name=MDY4307270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736700.1;locus_tag=SNF32_07680;product=hypothetical protein;protein_id=MDY4307270.1;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 27802 28019 . + . ID=gene-SNF32_07685;Name=SNF32_07685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07685;pseudo=true JAXGFV010000012.1 Protein Homology CDS 27802 28019 . + 0 ID=cds-SNF32_07685;Parent=gene-SNF32_07685;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736699.1;locus_tag=SNF32_07685;product=phage holin;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank gene 28009 28347 . + . ID=gene-SNF32_07690;Name=SNF32_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07690 JAXGFV010000012.1 Protein Homology CDS 28009 28347 . + 0 ID=cds-MDY4307271.1;Parent=gene-SNF32_07690;Dbxref=NCBI_GP:MDY4307271.1;Name=MDY4307271.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040275.2;locus_tag=SNF32_07690;product=DUF5960 family protein;protein_id=MDY4307271.1;transl_table=11 JAXGFV010000012.1 Genbank gene 28262 29239 . + . ID=gene-SNF32_07695;Name=SNF32_07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07695 JAXGFV010000012.1 Protein Homology CDS 28262 29239 . + 0 ID=cds-MDY4307272.1;Parent=gene-SNF32_07695;Dbxref=NCBI_GP:MDY4307272.1;Name=MDY4307272.1;Ontology_term=GO:0008745,GO:0046872;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736697.1;locus_tag=SNF32_07695;product=N-acetylmuramoyl-L-alanine amidase;protein_id=MDY4307272.1;transl_table=11 JAXGFV010000012.1 Genbank gene 29270 29398 . - . ID=gene-SNF32_07700;Name=SNF32_07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07700 JAXGFV010000012.1 GeneMarkS-2+ CDS 29270 29398 . - 0 ID=cds-MDY4307273.1;Parent=gene-SNF32_07700;Dbxref=NCBI_GP:MDY4307273.1;Name=MDY4307273.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07700;product=hypothetical protein;protein_id=MDY4307273.1;transl_table=11 JAXGFV010000012.1 Genbank gene 29957 30115 . - . ID=gene-SNF32_07705;Name=SNF32_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07705 JAXGFV010000012.1 Protein Homology CDS 29957 30115 . - 0 ID=cds-MDY4307274.1;Parent=gene-SNF32_07705;Dbxref=NCBI_GP:MDY4307274.1;Name=MDY4307274.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040275.2;locus_tag=SNF32_07705;product=DUF5960 family protein;protein_id=MDY4307274.1;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 30671 31394 . + . ID=gene-SNF32_07710;Name=SNF32_07710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07710;pseudo=true JAXGFV010000012.1 Protein Homology CDS 30671 31394 . + 0 ID=cds-SNF32_07710;Parent=gene-SNF32_07710;Note=frameshifted;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735082.1;locus_tag=SNF32_07710;product=response regulator transcription factor;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank gene 31387 31551 . - . ID=gene-SNF32_07715;Name=SNF32_07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07715 JAXGFV010000012.1 Protein Homology CDS 31387 31551 . - 0 ID=cds-MDY4307275.1;Parent=gene-SNF32_07715;Dbxref=NCBI_GP:MDY4307275.1;Name=MDY4307275.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF013991.3;locus_tag=SNF32_07715;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=MDY4307275.1;transl_table=11 JAXGFV010000012.1 Genbank gene 31476 31718 . - . ID=gene-SNF32_07720;Name=SNF32_07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07720 JAXGFV010000012.1 Protein Homology CDS 31476 31718 . - 0 ID=cds-MDY4307276.1;Parent=gene-SNF32_07720;Dbxref=NCBI_GP:MDY4307276.1;Name=MDY4307276.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF013991.3;locus_tag=SNF32_07720;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=MDY4307276.1;transl_table=11 JAXGFV010000012.1 Genbank gene 31601 32059 . - . ID=gene-SNF32_07725;Name=SNF32_07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07725 JAXGFV010000012.1 Protein Homology CDS 31601 32059 . - 0 ID=cds-MDY4307277.1;Parent=gene-SNF32_07725;Dbxref=NCBI_GP:MDY4307277.1;Name=MDY4307277.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF013991.3;locus_tag=SNF32_07725;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=MDY4307277.1;transl_table=11 JAXGFV010000012.1 Genbank gene 32050 32241 . - . ID=gene-SNF32_07730;Name=SNF32_07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07730 JAXGFV010000012.1 Protein Homology CDS 32050 32241 . - 0 ID=cds-MDY4307278.1;Parent=gene-SNF32_07730;Dbxref=NCBI_GP:MDY4307278.1;Name=MDY4307278.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF013991.3;locus_tag=SNF32_07730;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=MDY4307278.1;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 32234 32928 . - . ID=gene-SNF32_07735;Name=SNF32_07735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07735;pseudo=true JAXGFV010000012.1 Protein Homology CDS 32234 32928 . - 0 ID=cds-SNF32_07735;Parent=gene-SNF32_07735;Note=frameshifted;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002356006.1;locus_tag=SNF32_07735;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 33171 34513 . - . ID=gene-SNF32_07740;Name=SNF32_07740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07740;pseudo=true JAXGFV010000012.1 Protein Homology CDS 33171 34513 . - 0 ID=cds-SNF32_07740;Parent=gene-SNF32_07740;Note=frameshifted;Ontology_term=GO:0015746,GO:0015137,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=citrate transmembrane transporter activity|0015137||IEA;go_process=citrate transport|0015746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003088270.1;locus_tag=SNF32_07740;product=citrate:proton symporter;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank gene 35002 35157 . + . ID=gene-SNF32_07745;Name=SNF32_07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07745 JAXGFV010000012.1 GeneMarkS-2+ CDS 35002 35157 . + 0 ID=cds-MDY4307279.1;Parent=gene-SNF32_07745;Dbxref=NCBI_GP:MDY4307279.1;Name=MDY4307279.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07745;product=hypothetical protein;protein_id=MDY4307279.1;transl_table=11 JAXGFV010000012.1 Genbank gene 35247 35642 . + . ID=gene-SNF32_07750;Name=SNF32_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07750 JAXGFV010000012.1 Protein Homology CDS 35247 35642 . + 0 ID=cds-MDY4307280.1;Parent=gene-SNF32_07750;Dbxref=NCBI_GP:MDY4307280.1;Name=MDY4307280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010777321.1;locus_tag=SNF32_07750;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=MDY4307280.1;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 35715 36827 . + . ID=gene-SNF32_07755;Name=SNF32_07755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07755;pseudo=true JAXGFV010000012.1 Protein Homology CDS 35715 36827 . + 0 ID=cds-SNF32_07755;Parent=gene-SNF32_07755;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010770046.1;locus_tag=SNF32_07755;product=sodium ion-translocating decarboxylase subunit beta;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank gene 36843 36968 . + . ID=gene-SNF32_07760;Name=SNF32_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07760 JAXGFV010000012.1 Protein Homology CDS 36843 36968 . + 0 ID=cds-MDY4307281.1;Parent=gene-SNF32_07760;Dbxref=NCBI_GP:MDY4307281.1;Name=MDY4307281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008381833.1;locus_tag=SNF32_07760;product=OadG-related small transporter subunit;protein_id=MDY4307281.1;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 36985 37993 . + . ID=gene-SNF32_07765;Name=citC;gbkey=Gene;gene=citC;gene_biotype=pseudogene;locus_tag=SNF32_07765;pseudo=true JAXGFV010000012.1 Protein Homology CDS 36985 37993 . + 0 ID=cds-SNF32_07765;Parent=gene-SNF32_07765;Note=frameshifted;Ontology_term=GO:0006101,GO:0008771;gbkey=CDS;gene=citC;go_function=[citrate (pro-3S)-lyase] ligase activity|0008771||IEA;go_process=citrate metabolic process|0006101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735090.1;locus_tag=SNF32_07765;product=[citrate (pro-3S)-lyase] ligase;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank gene 37990 38298 . + . ID=gene-SNF32_07770;Name=citD;gbkey=Gene;gene=citD;gene_biotype=protein_coding;locus_tag=SNF32_07770 JAXGFV010000012.1 Protein Homology CDS 37990 38298 . + 0 ID=cds-MDY4307282.1;Parent=gene-SNF32_07770;Dbxref=NCBI_GP:MDY4307282.1;Name=MDY4307282.1;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citD;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005230465.1;locus_tag=SNF32_07770;product=citrate lyase acyl carrier protein;protein_id=MDY4307282.1;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 38286 39172 . + . ID=gene-SNF32_07775;Name=citE;gbkey=Gene;gene=citE;gene_biotype=pseudogene;locus_tag=SNF32_07775;pseudo=true JAXGFV010000012.1 Protein Homology CDS 38286 39172 . + 0 ID=cds-SNF32_07775;Parent=gene-SNF32_07775;Note=frameshifted;Ontology_term=GO:0006113,GO:0008815,GO:0009346;gbkey=CDS;gene=citE;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016625899.1;locus_tag=SNF32_07775;product=citrate (pro-3S)-lyase subunit beta;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 39175 40701 . + . ID=gene-SNF32_07780;Name=citF;gbkey=Gene;gene=citF;gene_biotype=pseudogene;locus_tag=SNF32_07780;pseudo=true JAXGFV010000012.1 Protein Homology CDS 39175 40701 . + 0 ID=cds-SNF32_07780;Parent=gene-SNF32_07780;Note=frameshifted;Ontology_term=GO:0006113,GO:0008814,GO:0008815,GO:0009346;gbkey=CDS;gene=citF;go_component=ATP-independent citrate lyase complex|0009346||IEA;go_function=citrate CoA-transferase activity|0008814||IEA,citrate (pro-3S)-lyase activity|0008815||IEA;go_process=fermentation|0006113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016365694.1;locus_tag=SNF32_07780;product=citrate lyase subunit alpha;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank gene 40694 40981 . + . ID=gene-SNF32_07785;Name=SNF32_07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07785 JAXGFV010000012.1 Protein Homology CDS 40694 40981 . + 0 ID=cds-MDY4307283.1;Parent=gene-SNF32_07785;Dbxref=NCBI_GP:MDY4307283.1;Name=MDY4307283.1;Ontology_term=GO:0051191;gbkey=CDS;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: protein motif:HMM:NF015742.3;locus_tag=SNF32_07785;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=MDY4307283.1;transl_table=11 JAXGFV010000012.1 Genbank gene 40966 41091 . + . ID=gene-SNF32_07790;Name=SNF32_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07790 JAXGFV010000012.1 Protein Homology CDS 40966 41091 . + 0 ID=cds-MDY4307284.1;Parent=gene-SNF32_07790;Dbxref=NCBI_GP:MDY4307284.1;Name=MDY4307284.1;Ontology_term=GO:0051191;gbkey=CDS;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: protein motif:HMM:NF015742.3;locus_tag=SNF32_07790;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=MDY4307284.1;transl_table=11 JAXGFV010000012.1 Genbank gene 41100 41231 . + . ID=gene-SNF32_07795;Name=SNF32_07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07795 JAXGFV010000012.1 Protein Homology CDS 41100 41231 . + 0 ID=cds-MDY4307285.1;Parent=gene-SNF32_07795;Dbxref=NCBI_GP:MDY4307285.1;Name=MDY4307285.1;Ontology_term=GO:0051191;gbkey=CDS;go_process=prosthetic group biosynthetic process|0051191||IEA;inference=COORDINATES: protein motif:HMM:NF015742.3;locus_tag=SNF32_07795;product=citrate lyase holo-[acyl-carrier protein] synthase;protein_id=MDY4307285.1;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 41248 42621 . + . ID=gene-SNF32_07800;Name=SNF32_07800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07800;pseudo=true JAXGFV010000012.1 Protein Homology CDS 41248 42621 . + 0 ID=cds-SNF32_07800;Parent=gene-SNF32_07800;Note=frameshifted;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005230457.1;locus_tag=SNF32_07800;product=oxaloacetate decarboxylase subunit alpha;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 42914 43686 . - . ID=gene-SNF32_07805;Name=SNF32_07805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07805;pseudo=true JAXGFV010000012.1 Protein Homology CDS 42914 43686 . - 0 ID=cds-SNF32_07805;Parent=gene-SNF32_07805;Note=frameshifted;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002346978.1;locus_tag=SNF32_07805;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 43854 44175 . + . ID=gene-SNF32_07810;Name=SNF32_07810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07810;pseudo=true JAXGFV010000012.1 Protein Homology CDS 43854 44175 . + 0 ID=cds-SNF32_07810;Parent=gene-SNF32_07810;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005876856.1;locus_tag=SNF32_07810;product=SdpI family protein;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 44156 44869 . + . ID=gene-SNF32_07815;Name=SNF32_07815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07815;pseudo=true JAXGFV010000012.1 Protein Homology CDS 44156 44869 . + 0 ID=cds-SNF32_07815;Parent=gene-SNF32_07815;Note=frameshifted;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002338866.1;locus_tag=SNF32_07815;product=response regulator transcription factor;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 44869 46309 . + . ID=gene-SNF32_07820;Name=SNF32_07820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07820;pseudo=true JAXGFV010000012.1 Protein Homology CDS 44869 46309 . + 0 ID=cds-SNF32_07820;Parent=gene-SNF32_07820;Note=frameshifted;Ontology_term=GO:0007165,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735099.1;locus_tag=SNF32_07820;product=HAMP domain-containing sensor histidine kinase;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank gene 46386 46592 . - . ID=gene-SNF32_07825;Name=SNF32_07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07825 JAXGFV010000012.1 GeneMarkS-2+ CDS 46386 46592 . - 0 ID=cds-MDY4307286.1;Parent=gene-SNF32_07825;Dbxref=NCBI_GP:MDY4307286.1;Name=MDY4307286.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07825;product=hypothetical protein;protein_id=MDY4307286.1;transl_table=11 JAXGFV010000012.1 Genbank gene 46725 46895 . - . ID=gene-SNF32_07830;Name=SNF32_07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07830 JAXGFV010000012.1 GeneMarkS-2+ CDS 46725 46895 . - 0 ID=cds-MDY4307287.1;Parent=gene-SNF32_07830;Dbxref=NCBI_GP:MDY4307287.1;Name=MDY4307287.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07830;product=hypothetical protein;protein_id=MDY4307287.1;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 48087 50232 . - . ID=gene-SNF32_07835;Name=SNF32_07835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07835;pseudo=true JAXGFV010000012.1 Protein Homology CDS 48087 50232 . - 0 ID=cds-SNF32_07835;Parent=gene-SNF32_07835;Note=frameshifted;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722956.1;locus_tag=SNF32_07835;product=LTA synthase family protein;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank gene 50775 50888 . + . ID=gene-SNF32_07840;Name=SNF32_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07840 JAXGFV010000012.1 Protein Homology CDS 50775 50888 . + 0 ID=cds-MDY4307288.1;Parent=gene-SNF32_07840;Dbxref=NCBI_GP:MDY4307288.1;Name=MDY4307288.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036808.3;locus_tag=SNF32_07840;product=hypothetical protein;protein_id=MDY4307288.1;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 51203 51846 . + . ID=gene-SNF32_07845;Name=SNF32_07845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07845;pseudo=true JAXGFV010000012.1 Protein Homology CDS 51203 51846 . + 0 ID=cds-SNF32_07845;Parent=gene-SNF32_07845;Note=frameshifted;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: protein motif:HMM:NF022137.3;locus_tag=SNF32_07845;product=class I SAM-dependent rRNA methyltransferase;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank gene 51847 52602 . + . ID=gene-SNF32_07850;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=SNF32_07850 JAXGFV010000012.1 Protein Homology CDS 51847 52602 . + 0 ID=cds-MDY4307289.1;Parent=gene-SNF32_07850;Dbxref=NCBI_GP:MDY4307289.1;Name=MDY4307289.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722954.1;locus_tag=SNF32_07850;product=type I 3-dehydroquinate dehydratase;protein_id=MDY4307289.1;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 52623 53104 . + . ID=gene-SNF32_07855;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=pseudogene;locus_tag=SNF32_07855;pseudo=true JAXGFV010000012.1 Protein Homology CDS 52623 53104 . + 0 ID=cds-SNF32_07855;Parent=gene-SNF32_07855;Note=frameshifted;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735105.1;locus_tag=SNF32_07855;product=Cys-tRNA(Pro) deacylase;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 53217 54452 . - . ID=gene-SNF32_07860;Name=SNF32_07860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07860;pseudo=true JAXGFV010000012.1 Protein Homology CDS 53217 54452 . - 0 ID=cds-SNF32_07860;Parent=gene-SNF32_07860;Note=frameshifted%3B internal stop;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735106.1;locus_tag=SNF32_07860;product=NAD(P)/FAD-dependent oxidoreductase;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 54582 55927 . + . ID=gene-SNF32_07865;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=pseudogene;locus_tag=SNF32_07865;pseudo=true JAXGFV010000012.1 Protein Homology CDS 54582 55927 . + 0 ID=cds-SNF32_07865;Parent=gene-SNF32_07865;Note=frameshifted;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016631211.1;locus_tag=SNF32_07865;product=NADP-specific glutamate dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 56037 57382 . + . ID=gene-SNF32_07870;Name=SNF32_07870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07870;pseudo=true JAXGFV010000012.1 Protein Homology CDS 56037 57382 . + 0 ID=cds-SNF32_07870;Parent=gene-SNF32_07870;Note=frameshifted;Ontology_term=GO:0006096,GO:0004347;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002340398.1;locus_tag=SNF32_07870;product=glucose-6-phosphate isomerase;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank gene 58536 58733 . + . ID=gene-SNF32_07875;Name=SNF32_07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07875 JAXGFV010000012.1 Protein Homology CDS 58536 58733 . + 0 ID=cds-MDY4307290.1;Parent=gene-SNF32_07875;Dbxref=NCBI_GP:MDY4307290.1;Name=MDY4307290.1;Ontology_term=GO:0001072,GO:0003676,GO:0003723,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,nucleic acid binding|0003676||IEA,RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002342557.1;locus_tag=SNF32_07875;product=cold-shock protein;protein_id=MDY4307290.1;transl_table=11 JAXGFV010000012.1 Genbank gene 58906 59184 . + . ID=gene-SNF32_07880;Name=SNF32_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07880 JAXGFV010000012.1 GeneMarkS-2+ CDS 58906 59184 . + 0 ID=cds-MDY4307291.1;Parent=gene-SNF32_07880;Dbxref=NCBI_GP:MDY4307291.1;Name=MDY4307291.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07880;product=hypothetical protein;protein_id=MDY4307291.1;transl_table=11 JAXGFV010000012.1 Genbank gene 59563 59946 . + . ID=gene-SNF32_07885;Name=SNF32_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07885 JAXGFV010000012.1 GeneMarkS-2+ CDS 59563 59946 . + 0 ID=cds-MDY4307292.1;Parent=gene-SNF32_07885;Dbxref=NCBI_GP:MDY4307292.1;Name=MDY4307292.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07885;product=hypothetical protein;protein_id=MDY4307292.1;transl_table=11 JAXGFV010000012.1 Genbank gene 60168 60365 . + . ID=gene-SNF32_07890;Name=SNF32_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07890 JAXGFV010000012.1 Protein Homology CDS 60168 60365 . + 0 ID=cds-MDY4307293.1;Parent=gene-SNF32_07890;Dbxref=NCBI_GP:MDY4307293.1;Name=MDY4307293.1;Ontology_term=GO:0001072,GO:0003676,GO:0003723,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,nucleic acid binding|0003676||IEA,RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002342557.1;locus_tag=SNF32_07890;product=cold-shock protein;protein_id=MDY4307293.1;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 60921 61981 . - . ID=gene-SNF32_07895;Name=SNF32_07895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07895;pseudo=true JAXGFV010000012.1 Protein Homology CDS 60921 61981 . - 0 ID=cds-SNF32_07895;Parent=gene-SNF32_07895;Note=frameshifted;Ontology_term=GO:0006304,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002324030.1;locus_tag=SNF32_07895;product=type I restriction endonuclease;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank gene 62098 62526 . - . ID=gene-SNF32_07900;Name=SNF32_07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07900 JAXGFV010000012.1 Protein Homology CDS 62098 62526 . - 0 ID=cds-MDY4307294.1;Parent=gene-SNF32_07900;Dbxref=NCBI_GP:MDY4307294.1;Name=MDY4307294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002337218.1;locus_tag=SNF32_07900;product=ImmA/IrrE family metallo-endopeptidase;protein_id=MDY4307294.1;transl_table=11 JAXGFV010000012.1 Genbank pseudogene 62533 62893 . - . ID=gene-SNF32_07905;Name=SNF32_07905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07905;pseudo=true JAXGFV010000012.1 Protein Homology CDS 62533 62893 . - 0 ID=cds-SNF32_07905;Parent=gene-SNF32_07905;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735116.1;locus_tag=SNF32_07905;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000012.1 Genbank gene 63210 63506 . + . ID=gene-SNF32_07910;Name=SNF32_07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07910 JAXGFV010000012.1 GeneMarkS-2+ CDS 63210 63506 . + 0 ID=cds-MDY4307295.1;Parent=gene-SNF32_07910;Dbxref=NCBI_GP:MDY4307295.1;Name=MDY4307295.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07910;product=hypothetical protein;protein_id=MDY4307295.1;transl_table=11 JAXGFV010000012.1 Genbank gene 63485 63629 . + . ID=gene-SNF32_07915;Name=SNF32_07915;end_range=63629,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07915;partial=true JAXGFV010000012.1 Protein Homology CDS 63485 63629 . + 0 ID=cds-MDY4307296.1;Parent=gene-SNF32_07915;Dbxref=NCBI_GP:MDY4307296.1;Name=MDY4307296.1;end_range=63629,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016961.3;locus_tag=SNF32_07915;partial=true;product=hypothetical protein;protein_id=MDY4307296.1;transl_table=11 ##sequence-region JAXGFV010000120.1 1 1298 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000120.1 Genbank region 1 1298 . + . ID=JAXGFV010000120.1:1..1298;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000120.1 Genbank gene 1 384 . + . ID=gene-SNF32_17145;Name=SNF32_17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17145;partial=true;start_range=.,1 JAXGFV010000120.1 Protein Homology CDS 1 384 . + 0 ID=cds-MDY4308223.1;Parent=gene-SNF32_17145;Dbxref=NCBI_GP:MDY4308223.1;Name=MDY4308223.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016901.3;locus_tag=SNF32_17145;partial=true;product=helix-turn-helix domain-containing protein;protein_id=MDY4308223.1;start_range=.,1;transl_table=11 JAXGFV010000120.1 Genbank gene 402 1298 . + . ID=gene-SNF32_17150;Name=SNF32_17150;end_range=1298,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17150;partial=true JAXGFV010000120.1 GeneMarkS-2+ CDS 402 1298 . + 0 ID=cds-MDY4308224.1;Parent=gene-SNF32_17150;Dbxref=NCBI_GP:MDY4308224.1;Name=MDY4308224.1;end_range=1298,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_17150;partial=true;product=M protein trans-acting positive regulator;protein_id=MDY4308224.1;transl_table=11 ##sequence-region JAXGFV010000121.1 1 1286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000121.1 Genbank region 1 1286 . + . ID=JAXGFV010000121.1:1..1286;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000121.1 Genbank gene 1 313 . + . ID=gene-SNF32_17155;Name=SNF32_17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17155;partial=true;start_range=.,1 JAXGFV010000121.1 GeneMarkS-2+ CDS 1 313 . + 1 ID=cds-MDY4308225.1;Parent=gene-SNF32_17155;Dbxref=NCBI_GP:MDY4308225.1;Name=MDY4308225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_17155;partial=true;product=hypothetical protein;protein_id=MDY4308225.1;start_range=.,1;transl_table=11 JAXGFV010000121.1 Genbank gene 307 453 . + . ID=gene-SNF32_17160;Name=SNF32_17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17160 JAXGFV010000121.1 Protein Homology CDS 307 453 . + 0 ID=cds-MDY4308226.1;Parent=gene-SNF32_17160;Dbxref=NCBI_GP:MDY4308226.1;Name=MDY4308226.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025792.3;locus_tag=SNF32_17160;product=hypothetical protein;protein_id=MDY4308226.1;transl_table=11 JAXGFV010000121.1 Genbank gene 782 1286 . - . ID=gene-SNF32_17165;Name=SNF32_17165;end_range=1286,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17165;partial=true JAXGFV010000121.1 Protein Homology CDS 782 1286 . - 1 ID=cds-MDY4308227.1;Parent=gene-SNF32_17165;Dbxref=NCBI_GP:MDY4308227.1;Name=MDY4308227.1;end_range=1286,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722516.1;locus_tag=SNF32_17165;partial=true;product=hypothetical protein;protein_id=MDY4308227.1;transl_table=11 ##sequence-region JAXGFV010000122.1 1 964 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000122.1 Genbank region 1 964 . + . ID=JAXGFV010000122.1:1..964;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000122.1 Genbank gene 1 337 . + . ID=gene-SNF32_17170;Name=SNF32_17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17170;partial=true;start_range=.,1 JAXGFV010000122.1 GeneMarkS-2+ CDS 1 337 . + 1 ID=cds-MDY4308228.1;Parent=gene-SNF32_17170;Dbxref=NCBI_GP:MDY4308228.1;Name=MDY4308228.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_17170;partial=true;product=hypothetical protein;protein_id=MDY4308228.1;start_range=.,1;transl_table=11 JAXGFV010000122.1 Genbank gene 514 964 . - . ID=gene-SNF32_17175;Name=SNF32_17175;end_range=964,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17175;partial=true JAXGFV010000122.1 Protein Homology CDS 514 964 . - 1 ID=cds-MDY4308229.1;Parent=gene-SNF32_17175;Dbxref=NCBI_GP:MDY4308229.1;Name=MDY4308229.1;Ontology_term=GO:0004519;end_range=964,.;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016250016.1;locus_tag=SNF32_17175;partial=true;product=EndoU domain-containing protein;protein_id=MDY4308229.1;transl_table=11 ##sequence-region JAXGFV010000123.1 1 813 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000123.1 Genbank region 1 813 . + . ID=JAXGFV010000123.1:1..813;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000123.1 Genbank gene 1 357 . + . ID=gene-SNF32_17180;Name=SNF32_17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17180;partial=true;start_range=.,1 JAXGFV010000123.1 GeneMarkS-2+ CDS 1 357 . + 0 ID=cds-MDY4308230.1;Parent=gene-SNF32_17180;Dbxref=NCBI_GP:MDY4308230.1;Name=MDY4308230.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_17180;partial=true;product=hypothetical protein;protein_id=MDY4308230.1;start_range=.,1;transl_table=11 JAXGFV010000123.1 Genbank gene 354 737 . + . ID=gene-SNF32_17185;Name=SNF32_17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17185 JAXGFV010000123.1 GeneMarkS-2+ CDS 354 737 . + 0 ID=cds-MDY4308231.1;Parent=gene-SNF32_17185;Dbxref=NCBI_GP:MDY4308231.1;Name=MDY4308231.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_17185;product=hypothetical protein;protein_id=MDY4308231.1;transl_table=11 ##sequence-region JAXGFV010000124.1 1 808 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000124.1 Genbank region 1 808 . + . ID=JAXGFV010000124.1:1..808;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000124.1 Genbank gene 1 300 . - . ID=gene-SNF32_17190;Name=SNF32_17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17190;partial=true;start_range=.,1 JAXGFV010000124.1 Protein Homology CDS 1 300 . - 0 ID=cds-MDY4308232.1;Parent=gene-SNF32_17190;Dbxref=NCBI_GP:MDY4308232.1;Name=MDY4308232.1;Ontology_term=GO:0006508,GO:0005524,GO:0008233,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016853331.1;locus_tag=SNF32_17190;partial=true;product=cysteine peptidase family C39 domain-containing protein;protein_id=MDY4308232.1;start_range=.,1;transl_table=11 JAXGFV010000124.1 Genbank pseudogene 388 539 . - . ID=gene-SNF32_17195;Name=SNF32_17195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_17195;pseudo=true JAXGFV010000124.1 Protein Homology CDS 388 539 . - 0 ID=cds-SNF32_17195;Parent=gene-SNF32_17195;Note=frameshifted;Ontology_term=GO:0042742,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_process=defense response to bacterium|0042742||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004271275.1;locus_tag=SNF32_17195;product=leucocin A/sakacin P family class II bacteriocin;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000125.1 1 775 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000125.1 Genbank region 1 775 . + . ID=JAXGFV010000125.1:1..775;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000125.1 Genbank gene 199 399 . + . ID=gene-SNF32_17200;Name=SNF32_17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17200 JAXGFV010000125.1 Protein Homology CDS 199 399 . + 0 ID=cds-MDY4308233.1;Parent=gene-SNF32_17200;Dbxref=NCBI_GP:MDY4308233.1;Name=MDY4308233.1;Ontology_term=GO:0001072,GO:0003676,GO:0003723,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,nucleic acid binding|0003676||IEA,RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002306603.1;locus_tag=SNF32_17200;product=cold-shock protein;protein_id=MDY4308233.1;transl_table=11 JAXGFV010000125.1 Genbank gene 465 650 . + . ID=gene-SNF32_17205;Name=SNF32_17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17205 JAXGFV010000125.1 Protein Homology CDS 465 650 . + 0 ID=cds-MDY4308234.1;Parent=gene-SNF32_17205;Dbxref=NCBI_GP:MDY4308234.1;Name=MDY4308234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016620693.1;locus_tag=SNF32_17205;product=hypothetical protein;protein_id=MDY4308234.1;transl_table=11 ##sequence-region JAXGFV010000126.1 1 768 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000126.1 Genbank region 1 768 . + . ID=JAXGFV010000126.1:1..768;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000126.1 Genbank gene 1 193 . + . ID=gene-SNF32_17210;Name=SNF32_17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17210;partial=true;start_range=.,1 JAXGFV010000126.1 GeneMarkS-2+ CDS 1 193 . + 1 ID=cds-MDY4308235.1;Parent=gene-SNF32_17210;Dbxref=NCBI_GP:MDY4308235.1;Name=MDY4308235.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_17210;partial=true;product=hypothetical protein;protein_id=MDY4308235.1;start_range=.,1;transl_table=11 JAXGFV010000126.1 Genbank gene 265 462 . + . ID=gene-SNF32_17215;Name=SNF32_17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17215 JAXGFV010000126.1 GeneMarkS-2+ CDS 265 462 . + 0 ID=cds-MDY4308236.1;Parent=gene-SNF32_17215;Dbxref=NCBI_GP:MDY4308236.1;Name=MDY4308236.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_17215;product=hypothetical protein;protein_id=MDY4308236.1;transl_table=11 JAXGFV010000126.1 Genbank gene 462 768 . + . ID=gene-SNF32_17220;Name=SNF32_17220;end_range=768,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17220;partial=true JAXGFV010000126.1 Protein Homology CDS 462 768 . + 0 ID=cds-MDY4308237.1;Parent=gene-SNF32_17220;Dbxref=NCBI_GP:MDY4308237.1;Name=MDY4308237.1;end_range=768,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722880.1;locus_tag=SNF32_17220;partial=true;product=triacylglycerol lipase;protein_id=MDY4308237.1;transl_table=11 ##sequence-region JAXGFV010000127.1 1 711 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000127.1 Genbank region 1 711 . + . ID=JAXGFV010000127.1:1..711;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000127.1 Genbank pseudogene 1 576 . - . ID=gene-SNF32_17225;Name=SNF32_17225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_17225;pseudo=true JAXGFV010000127.1 Protein Homology CDS 1 576 . - 0 ID=cds-SNF32_17225;Parent=gene-SNF32_17225;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611665.1;locus_tag=SNF32_17225;product=ISL3 family transposase;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000128.1 1 700 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000128.1 Genbank region 1 700 . + . ID=JAXGFV010000128.1:1..700;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000128.1 Genbank gene 1 700 . + . ID=gene-SNF32_17230;Name=SNF32_17230;end_range=700,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17230;partial=true;start_range=.,1 JAXGFV010000128.1 Protein Homology CDS 1 700 . + 2 ID=cds-MDY4308238.1;Parent=gene-SNF32_17230;Dbxref=NCBI_GP:MDY4308238.1;Name=MDY4308238.1;end_range=700,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016250016.1;locus_tag=SNF32_17230;partial=true;product=hypothetical protein;protein_id=MDY4308238.1;start_range=.,1;transl_table=11 ##sequence-region JAXGFV010000129.1 1 672 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000129.1 Genbank region 1 672 . + . ID=JAXGFV010000129.1:1..672;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000129.1 Genbank gene 1 470 . + . ID=gene-SNF32_17235;Name=SNF32_17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17235;partial=true;start_range=.,1 JAXGFV010000129.1 GeneMarkS-2+ CDS 1 470 . + 2 ID=cds-MDY4308239.1;Parent=gene-SNF32_17235;Dbxref=NCBI_GP:MDY4308239.1;Name=MDY4308239.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_17235;partial=true;product=hypothetical protein;protein_id=MDY4308239.1;start_range=.,1;transl_table=11 ##sequence-region JAXGFV010000013.1 1 62411 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000013.1 Genbank region 1 62411 . + . ID=JAXGFV010000013.1:1..62411;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000013.1 Genbank pseudogene 1 1682 . - . ID=gene-SNF32_07920;Name=SNF32_07920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07920;pseudo=true JAXGFV010000013.1 Protein Homology CDS 1 1682 . - 0 ID=cds-SNF32_07920;Parent=gene-SNF32_07920;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723017.1;locus_tag=SNF32_07920;product=SNF2 helicase associated domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 1701 2403 . - . ID=gene-SNF32_07925;Name=SNF32_07925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07925;pseudo=true JAXGFV010000013.1 Protein Homology CDS 1701 2403 . - 0 ID=cds-SNF32_07925;Parent=gene-SNF32_07925;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002365047.1;locus_tag=SNF32_07925;product=SbcC/MukB-like Walker B domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank gene 2799 3071 . - . ID=gene-SNF32_07930;Name=SNF32_07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07930 JAXGFV010000013.1 GeneMarkS-2+ CDS 2799 3071 . - 0 ID=cds-MDY4307297.1;Parent=gene-SNF32_07930;Dbxref=NCBI_GP:MDY4307297.1;Name=MDY4307297.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07930;product=hypothetical protein;protein_id=MDY4307297.1;transl_table=11 JAXGFV010000013.1 Genbank gene 3089 3388 . - . ID=gene-SNF32_07935;Name=SNF32_07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07935 JAXGFV010000013.1 GeneMarkS-2+ CDS 3089 3388 . - 0 ID=cds-MDY4307298.1;Parent=gene-SNF32_07935;Dbxref=NCBI_GP:MDY4307298.1;Name=MDY4307298.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07935;product=hypothetical protein;protein_id=MDY4307298.1;transl_table=11 JAXGFV010000013.1 Genbank gene 3382 3579 . - . ID=gene-SNF32_07940;Name=SNF32_07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07940 JAXGFV010000013.1 GeneMarkS-2+ CDS 3382 3579 . - 0 ID=cds-MDY4307299.1;Parent=gene-SNF32_07940;Dbxref=NCBI_GP:MDY4307299.1;Name=MDY4307299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07940;product=hypothetical protein;protein_id=MDY4307299.1;transl_table=11 JAXGFV010000013.1 Genbank gene 3576 3716 . - . ID=gene-SNF32_07945;Name=SNF32_07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07945 JAXGFV010000013.1 GeneMarkS-2+ CDS 3576 3716 . - 0 ID=cds-MDY4307300.1;Parent=gene-SNF32_07945;Dbxref=NCBI_GP:MDY4307300.1;Name=MDY4307300.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07945;product=hypothetical protein;protein_id=MDY4307300.1;transl_table=11 JAXGFV010000013.1 Genbank gene 3721 4566 . - . ID=gene-SNF32_07950;Name=SNF32_07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07950 JAXGFV010000013.1 GeneMarkS-2+ CDS 3721 4566 . - 0 ID=cds-MDY4307301.1;Parent=gene-SNF32_07950;Dbxref=NCBI_GP:MDY4307301.1;Name=MDY4307301.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_07950;product=hypothetical protein;protein_id=MDY4307301.1;transl_table=11 JAXGFV010000013.1 Genbank gene 4527 4823 . - . ID=gene-SNF32_07955;Name=SNF32_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07955 JAXGFV010000013.1 Protein Homology CDS 4527 4823 . - 0 ID=cds-MDY4307302.1;Parent=gene-SNF32_07955;Dbxref=NCBI_GP:MDY4307302.1;Name=MDY4307302.1;Ontology_term=GO:0006302,GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;go_process=double-strand break repair|0006302||IEA;inference=COORDINATES: protein motif:HMM:NF024867.3;locus_tag=SNF32_07955;product=AAA family ATPase;protein_id=MDY4307302.1;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 4830 5950 . - . ID=gene-SNF32_07960;Name=SNF32_07960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07960;pseudo=true JAXGFV010000013.1 Protein Homology CDS 4830 5950 . - 0 ID=cds-SNF32_07960;Parent=gene-SNF32_07960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002385704.1;locus_tag=SNF32_07960;product=exonuclease SbcCD subunit D;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 6081 6739 . - . ID=gene-SNF32_07965;Name=SNF32_07965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07965;pseudo=true JAXGFV010000013.1 Protein Homology CDS 6081 6739 . - 0 ID=cds-SNF32_07965;Parent=gene-SNF32_07965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005229679.1;locus_tag=SNF32_07965;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 6870 7600 . + . ID=gene-SNF32_07970;Name=SNF32_07970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07970;pseudo=true JAXGFV010000013.1 Protein Homology CDS 6870 7600 . + 0 ID=cds-SNF32_07970;Parent=gene-SNF32_07970;Note=frameshifted;Ontology_term=GO:0008170,GO:0016430,GO:1904047;gbkey=CDS;go_function=N-methyltransferase activity|0008170||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005877300.1;locus_tag=SNF32_07970;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank gene 7590 7877 . + . ID=gene-SNF32_07975;Name=SNF32_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07975 JAXGFV010000013.1 Protein Homology CDS 7590 7877 . + 0 ID=cds-MDY4307303.1;Parent=gene-SNF32_07975;Dbxref=NCBI_GP:MDY4307303.1;Name=MDY4307303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723021.1;locus_tag=SNF32_07975;product=GIY-YIG nuclease family protein;protein_id=MDY4307303.1;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 7998 9922 . - . ID=gene-SNF32_07980;Name=SNF32_07980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07980;pseudo=true JAXGFV010000013.1 Protein Homology CDS 7998 9922 . - 0 ID=cds-SNF32_07980;Parent=gene-SNF32_07980;Note=frameshifted;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005877304.1;locus_tag=SNF32_07980;product=acyltransferase family protein;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank gene 10314 10700 . - . ID=gene-SNF32_07985;Name=SNF32_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07985 JAXGFV010000013.1 Protein Homology CDS 10314 10700 . - 0 ID=cds-MDY4307304.1;Parent=gene-SNF32_07985;Dbxref=NCBI_GP:MDY4307304.1;Name=MDY4307304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016182684.1;locus_tag=SNF32_07985;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=MDY4307304.1;transl_table=11 JAXGFV010000013.1 Genbank gene 10735 10923 . - . ID=gene-SNF32_07990;Name=SNF32_07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_07990 JAXGFV010000013.1 Protein Homology CDS 10735 10923 . - 0 ID=cds-MDY4307305.1;Parent=gene-SNF32_07990;Dbxref=NCBI_GP:MDY4307305.1;Name=MDY4307305.1;Ontology_term=GO:0003729;gbkey=CDS;go_function=mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002334373.1;locus_tag=SNF32_07990;product=type II toxin-antitoxin system HicA family toxin;protein_id=MDY4307305.1;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 12838 13732 . - . ID=gene-SNF32_07995;Name=SNF32_07995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_07995;pseudo=true JAXGFV010000013.1 Protein Homology CDS 12838 13732 . - 0 ID=cds-SNF32_07995;Parent=gene-SNF32_07995;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723872.1;locus_tag=SNF32_07995;product=YitT family protein;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 13913 15676 . - . ID=gene-SNF32_08000;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=pseudogene;locus_tag=SNF32_08000;pseudo=true JAXGFV010000013.1 Protein Homology CDS 13913 15676 . - 0 ID=cds-SNF32_08000;Parent=gene-SNF32_08000;Note=frameshifted;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005877308.1;locus_tag=SNF32_08000;product=aspartate--tRNA ligase;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 15676 16982 . - . ID=gene-SNF32_08005;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=pseudogene;locus_tag=SNF32_08005;pseudo=true JAXGFV010000013.1 Protein Homology CDS 15676 16982 . - 0 ID=cds-SNF32_08005;Parent=gene-SNF32_08005;Note=frameshifted;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003128675.1;locus_tag=SNF32_08005;product=histidine--tRNA ligase;pseudo=true;transl_table=11 JAXGFV010000013.1 cmsearch binding_site 17048 17259 . - . ID=id-JAXGFV010000013.1:17048..17259;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.4 JAXGFV010000013.1 Genbank pseudogene 17388 18336 . + . ID=gene-SNF32_08010;Name=SNF32_08010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08010;pseudo=true JAXGFV010000013.1 Protein Homology CDS 17388 18336 . + 0 ID=cds-SNF32_08010;Parent=gene-SNF32_08010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734227.1;locus_tag=SNF32_08010;product=aldo/keto reductase;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 18493 18763 . - . ID=gene-SNF32_08015;Name=SNF32_08015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08015;pseudo=true JAXGFV010000013.1 Protein Homology CDS 18493 18763 . - 0 ID=cds-SNF32_08015;Parent=gene-SNF32_08015;Note=frameshifted;Ontology_term=GO:0030541,GO:0051290,GO:0008657,GO:0042803;gbkey=CDS;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) inhibitor activity|0008657||IEA,protein homodimerization activity|0042803||IEA;go_process=plasmid partitioning|0030541||IEA,protein heterotetramerization|0051290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734226.1;locus_tag=SNF32_08015;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank gene 18760 18981 . - . ID=gene-SNF32_08020;Name=SNF32_08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08020 JAXGFV010000013.1 Protein Homology CDS 18760 18981 . - 0 ID=cds-MDY4307306.1;Parent=gene-SNF32_08020;Dbxref=NCBI_GP:MDY4307306.1;Name=MDY4307306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010766154.1;locus_tag=SNF32_08020;product=DUF6290 family protein;protein_id=MDY4307306.1;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 19074 20325 . - . ID=gene-SNF32_08025;Name=SNF32_08025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08025;pseudo=true JAXGFV010000013.1 Protein Homology CDS 19074 20325 . - 0 ID=cds-SNF32_08025;Parent=gene-SNF32_08025;Note=frameshifted;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723452.1;locus_tag=SNF32_08025;product=cytochrome P450;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 20902 21343 . - . ID=gene-SNF32_08030;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=pseudogene;locus_tag=SNF32_08030;pseudo=true JAXGFV010000013.1 Protein Homology CDS 20902 21343 . - 0 ID=cds-SNF32_08030;Parent=gene-SNF32_08030;Note=frameshifted;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002324241.1;locus_tag=SNF32_08030;product=D-aminoacyl-tRNA deacylase;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 21355 23562 . - . ID=gene-SNF32_08035;Name=SNF32_08035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08035;pseudo=true JAXGFV010000013.1 Protein Homology CDS 21355 23562 . - 0 ID=cds-SNF32_08035;Parent=gene-SNF32_08035;Note=frameshifted%3B internal stop;Ontology_term=GO:0015970,GO:0005524,GO:0005525,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016616266.1;locus_tag=SNF32_08035;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 23792 24552 . - . ID=gene-SNF32_08040;Name=SNF32_08040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08040;pseudo=true JAXGFV010000013.1 Protein Homology CDS 23792 24552 . - 0 ID=cds-SNF32_08040;Parent=gene-SNF32_08040;Note=frameshifted;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734221.1;locus_tag=SNF32_08040;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 24553 25498 . - . ID=gene-SNF32_08045;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=pseudogene;locus_tag=SNF32_08045;pseudo=true JAXGFV010000013.1 Protein Homology CDS 24553 25498 . - 0 ID=cds-SNF32_08045;Parent=gene-SNF32_08045;Note=frameshifted;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737084.1;locus_tag=SNF32_08045;product=50S ribosomal protein L11 methyltransferase;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 25511 25998 . - . ID=gene-SNF32_08050;Name=SNF32_08050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08050;pseudo=true JAXGFV010000013.1 Protein Homology CDS 25511 25998 . - 0 ID=cds-SNF32_08050;Parent=gene-SNF32_08050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629576.1;locus_tag=SNF32_08050;product=DUF3013 family protein;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 25967 26634 . - . ID=gene-SNF32_08055;Name=SNF32_08055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08055;pseudo=true JAXGFV010000013.1 Protein Homology CDS 25967 26634 . - 0 ID=cds-SNF32_08055;Parent=gene-SNF32_08055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723446.1;locus_tag=SNF32_08055;product=DNA-3-methyladenine glycosylase;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank gene 26840 28132 . + . ID=gene-SNF32_08060;Name=SNF32_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08060 JAXGFV010000013.1 Protein Homology CDS 26840 28132 . + 0 ID=cds-MDY4307307.1;Parent=gene-SNF32_08060;Dbxref=NCBI_GP:MDY4307307.1;Name=MDY4307307.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002341136.1;locus_tag=SNF32_08060;product=replication-associated recombination protein A;protein_id=MDY4307307.1;transl_table=11 JAXGFV010000013.1 Genbank gene 28197 28391 . + . ID=gene-SNF32_08065;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=SNF32_08065 JAXGFV010000013.1 cmsearch ncRNA 28197 28391 . + . ID=rna-SNF32_08065;Parent=gene-SNF32_08065;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=SNF32_08065;product=6S RNA JAXGFV010000013.1 cmsearch exon 28197 28391 . + . ID=exon-SNF32_08065-1;Parent=rna-SNF32_08065;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=SNF32_08065;product=6S RNA JAXGFV010000013.1 Genbank pseudogene 28482 28766 . + . ID=gene-SNF32_08070;Name=SNF32_08070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08070;pseudo=true JAXGFV010000013.1 Protein Homology CDS 28482 28766 . + 0 ID=cds-SNF32_08070;Parent=gene-SNF32_08070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723445.1;locus_tag=SNF32_08070;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank gene 28837 29310 . + . ID=gene-SNF32_08075;Name=SNF32_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08075 JAXGFV010000013.1 Protein Homology CDS 28837 29310 . + 0 ID=cds-MDY4307308.1;Parent=gene-SNF32_08075;Dbxref=NCBI_GP:MDY4307308.1;Name=MDY4307308.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005877330.1;locus_tag=SNF32_08075;product=universal stress protein;protein_id=MDY4307308.1;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 29359 31305 . - . ID=gene-SNF32_08080;Name=SNF32_08080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08080;pseudo=true JAXGFV010000013.1 Protein Homology CDS 29359 31305 . - 0 ID=cds-SNF32_08080;Parent=gene-SNF32_08080;Note=frameshifted;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734214.1;locus_tag=SNF32_08080;product=sucrose-specific PTS transporter subunit IIBC;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank gene 31533 33011 . + . ID=gene-SNF32_08085;Name=SNF32_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08085 JAXGFV010000013.1 Protein Homology CDS 31533 33011 . + 0 ID=cds-MDY4307309.1;Parent=gene-SNF32_08085;Dbxref=NCBI_GP:MDY4307309.1;Name=MDY4307309.1;Ontology_term=GO:0005975,GO:0004564;gbkey=CDS;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734213.1;locus_tag=SNF32_08085;product=sucrose-6-phosphate hydrolase;protein_id=MDY4307309.1;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 33024 34004 . + . ID=gene-SNF32_08090;Name=SNF32_08090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08090;pseudo=true JAXGFV010000013.1 Protein Homology CDS 33024 34004 . + 0 ID=cds-SNF32_08090;Parent=gene-SNF32_08090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002320730.1;locus_tag=SNF32_08090;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank gene 34244 34675 . - . ID=gene-SNF32_08095;Name=SNF32_08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08095 JAXGFV010000013.1 Protein Homology CDS 34244 34675 . - 0 ID=cds-MDY4307310.1;Parent=gene-SNF32_08095;Dbxref=NCBI_GP:MDY4307310.1;Name=MDY4307310.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025108.3;locus_tag=SNF32_08095;product=WxL domain-containing protein;protein_id=MDY4307310.1;transl_table=11 JAXGFV010000013.1 Genbank gene 34714 35397 . - . ID=gene-SNF32_08100;Name=SNF32_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08100 JAXGFV010000013.1 GeneMarkS-2+ CDS 34714 35397 . - 0 ID=cds-MDY4307311.1;Parent=gene-SNF32_08100;Dbxref=NCBI_GP:MDY4307311.1;Name=MDY4307311.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08100;product=hypothetical protein;protein_id=MDY4307311.1;transl_table=11 JAXGFV010000013.1 Genbank gene 35630 37270 . - . ID=gene-SNF32_08105;Name=SNF32_08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08105 JAXGFV010000013.1 Protein Homology CDS 35630 37270 . - 0 ID=cds-MDY4307312.1;Parent=gene-SNF32_08105;Dbxref=NCBI_GP:MDY4307312.1;Name=MDY4307312.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042900.1;locus_tag=SNF32_08105;product=pectate lyase-like adhesive domain-containing protein;protein_id=MDY4307312.1;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 37267 38276 . - . ID=gene-SNF32_08110;Name=SNF32_08110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08110;pseudo=true JAXGFV010000013.1 Protein Homology CDS 37267 38276 . - 0 ID=cds-SNF32_08110;Parent=gene-SNF32_08110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016621809.1;locus_tag=SNF32_08110;product=DUF916 and DUF3324 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 38394 39188 . - . ID=gene-SNF32_08115;Name=SNF32_08115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08115;pseudo=true JAXGFV010000013.1 Protein Homology CDS 38394 39188 . - 0 ID=cds-SNF32_08115;Parent=gene-SNF32_08115;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734209.1;locus_tag=SNF32_08115;product=WxL domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank gene 39309 39503 . + . ID=gene-SNF32_08120;Name=SNF32_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08120 JAXGFV010000013.1 GeneMarkS-2+ CDS 39309 39503 . + 0 ID=cds-MDY4307313.1;Parent=gene-SNF32_08120;Dbxref=NCBI_GP:MDY4307313.1;Name=MDY4307313.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08120;product=hypothetical protein;protein_id=MDY4307313.1;transl_table=11 JAXGFV010000013.1 Genbank gene 40539 40778 . + . ID=gene-SNF32_08125;Name=SNF32_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08125 JAXGFV010000013.1 GeneMarkS-2+ CDS 40539 40778 . + 0 ID=cds-MDY4307314.1;Parent=gene-SNF32_08125;Dbxref=NCBI_GP:MDY4307314.1;Name=MDY4307314.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08125;product=hypothetical protein;protein_id=MDY4307314.1;transl_table=11 JAXGFV010000013.1 Genbank gene 40925 41263 . + . ID=gene-SNF32_08130;Name=SNF32_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08130 JAXGFV010000013.1 GeneMarkS-2+ CDS 40925 41263 . + 0 ID=cds-MDY4307315.1;Parent=gene-SNF32_08130;Dbxref=NCBI_GP:MDY4307315.1;Name=MDY4307315.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08130;product=hypothetical protein;protein_id=MDY4307315.1;transl_table=11 JAXGFV010000013.1 Genbank gene 41547 42167 . - . ID=gene-SNF32_08135;Name=SNF32_08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08135 JAXGFV010000013.1 Protein Homology CDS 41547 42167 . - 0 ID=cds-MDY4307316.1;Parent=gene-SNF32_08135;Dbxref=NCBI_GP:MDY4307316.1;Name=MDY4307316.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014600.3;locus_tag=SNF32_08135;product=M15 family metallopeptidase;protein_id=MDY4307316.1;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 42733 42992 . + . ID=gene-SNF32_08140;Name=SNF32_08140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08140;pseudo=true JAXGFV010000013.1 Protein Homology CDS 42733 42992 . + 0 ID=cds-SNF32_08140;Parent=gene-SNF32_08140;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002320902.1;locus_tag=SNF32_08140;product=transposase;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 43107 44285 . - . ID=gene-SNF32_08145;Name=SNF32_08145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08145;pseudo=true JAXGFV010000013.1 Protein Homology CDS 43107 44285 . - 0 ID=cds-SNF32_08145;Parent=gene-SNF32_08145;Note=frameshifted;Ontology_term=GO:0006085,GO:0016310,GO:0000287,GO:0005524,GO:0008776;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,acetate kinase activity|0008776||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016634900.1;locus_tag=SNF32_08145;product=acetate kinase;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 44309 45313 . - . ID=gene-SNF32_08150;Name=SNF32_08150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08150;pseudo=true JAXGFV010000013.1 Protein Homology CDS 44309 45313 . - 0 ID=cds-SNF32_08150;Parent=gene-SNF32_08150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002286175.1;locus_tag=SNF32_08150;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank gene 45485 45661 . - . ID=gene-SNF32_08155;Name=SNF32_08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08155 JAXGFV010000013.1 Protein Homology CDS 45485 45661 . - 0 ID=cds-MDY4307317.1;Parent=gene-SNF32_08155;Dbxref=NCBI_GP:MDY4307317.1;Name=MDY4307317.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF041014.1;locus_tag=SNF32_08155;product=hypothetical protein;protein_id=MDY4307317.1;transl_table=11 JAXGFV010000013.1 Genbank gene 45809 46234 . - . ID=gene-SNF32_08160;Name=comGF;gbkey=Gene;gene=comGF;gene_biotype=protein_coding;locus_tag=SNF32_08160 JAXGFV010000013.1 Protein Homology CDS 45809 46234 . - 0 ID=cds-MDY4307318.1;Parent=gene-SNF32_08160;Dbxref=NCBI_GP:MDY4307318.1;Name=MDY4307318.1;gbkey=CDS;gene=comGF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722631.1;locus_tag=SNF32_08160;product=competence type IV pilus minor pilin ComGF;protein_id=MDY4307318.1;transl_table=11 JAXGFV010000013.1 Genbank gene 46218 46478 . - . ID=gene-SNF32_08165;Name=SNF32_08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08165 JAXGFV010000013.1 Protein Homology CDS 46218 46478 . - 0 ID=cds-MDY4307319.1;Parent=gene-SNF32_08165;Dbxref=NCBI_GP:MDY4307319.1;Name=MDY4307319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722630.1;locus_tag=SNF32_08165;product=hypothetical protein;protein_id=MDY4307319.1;transl_table=11 JAXGFV010000013.1 Genbank gene 46510 46809 . - . ID=gene-SNF32_08170;Name=comGD;gbkey=Gene;gene=comGD;gene_biotype=protein_coding;locus_tag=SNF32_08170 JAXGFV010000013.1 Protein Homology CDS 46510 46809 . - 0 ID=cds-MDY4307320.1;Parent=gene-SNF32_08170;Dbxref=NCBI_GP:MDY4307320.1;Name=MDY4307320.1;gbkey=CDS;gene=comGD;inference=COORDINATES: protein motif:HMM:NF040982.1;locus_tag=SNF32_08170;product=competence type IV pilus minor pilin ComGD;protein_id=MDY4307320.1;transl_table=11 JAXGFV010000013.1 Genbank gene 46817 46975 . - . ID=gene-SNF32_08175;Name=SNF32_08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08175 JAXGFV010000013.1 GeneMarkS-2+ CDS 46817 46975 . - 0 ID=cds-MDY4307321.1;Parent=gene-SNF32_08175;Dbxref=NCBI_GP:MDY4307321.1;Name=MDY4307321.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08175;product=hypothetical protein;protein_id=MDY4307321.1;transl_table=11 JAXGFV010000013.1 Genbank gene 46956 47237 . - . ID=gene-SNF32_08180;Name=comGC;gbkey=Gene;gene=comGC;gene_biotype=protein_coding;locus_tag=SNF32_08180 JAXGFV010000013.1 Protein Homology CDS 46956 47237 . - 0 ID=cds-MDY4307322.1;Parent=gene-SNF32_08180;Dbxref=NCBI_GP:MDY4307322.1;Name=MDY4307322.1;gbkey=CDS;gene=comGC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734198.1;locus_tag=SNF32_08180;product=competence type IV pilus major pilin ComGC;protein_id=MDY4307322.1;transl_table=11 JAXGFV010000013.1 Genbank gene 47720 48262 . - . ID=gene-SNF32_08185;Name=SNF32_08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08185 JAXGFV010000013.1 Protein Homology CDS 47720 48262 . - 0 ID=cds-MDY4307323.1;Parent=gene-SNF32_08185;Dbxref=NCBI_GP:MDY4307323.1;Name=MDY4307323.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012694.3;locus_tag=SNF32_08185;product=type II secretion system F family protein;protein_id=MDY4307323.1;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 48263 49160 . - . ID=gene-SNF32_08190;Name=comGA;gbkey=Gene;gene=comGA;gene_biotype=pseudogene;locus_tag=SNF32_08190;pseudo=true JAXGFV010000013.1 Protein Homology CDS 48263 49160 . - 0 ID=cds-SNF32_08190;Parent=gene-SNF32_08190;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=comGA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002346292.1;locus_tag=SNF32_08190;product=competence type IV pilus ATPase ComGA;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 49291 51028 . + . ID=gene-SNF32_08195;Name=ade;gbkey=Gene;gene=ade;gene_biotype=pseudogene;locus_tag=SNF32_08195;pseudo=true JAXGFV010000013.1 Protein Homology CDS 49291 51028 . + 0 ID=cds-SNF32_08195;Parent=gene-SNF32_08195;Note=frameshifted;Ontology_term=GO:0006168,GO:0000034;gbkey=CDS;gene=ade;go_function=adenine deaminase activity|0000034||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734195.1;locus_tag=SNF32_08195;product=adenine deaminase;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 51078 51727 . - . ID=gene-SNF32_08200;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=pseudogene;locus_tag=SNF32_08200;pseudo=true JAXGFV010000013.1 Protein Homology CDS 51078 51727 . - 0 ID=cds-SNF32_08200;Parent=gene-SNF32_08200;Note=frameshifted;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005877350.1;locus_tag=SNF32_08200;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 51840 52618 . - . ID=gene-SNF32_08205;Name=SNF32_08205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08205;pseudo=true JAXGFV010000013.1 Protein Homology CDS 51840 52618 . - 0 ID=cds-SNF32_08205;Parent=gene-SNF32_08205;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002297575.1;locus_tag=SNF32_08205;product=phosphotransferase family protein;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank gene 53073 53519 . - . ID=gene-SNF32_08210;Name=SNF32_08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08210 JAXGFV010000013.1 Protein Homology CDS 53073 53519 . - 0 ID=cds-MDY4307324.1;Parent=gene-SNF32_08210;Dbxref=NCBI_GP:MDY4307324.1;Name=MDY4307324.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF017759.3;locus_tag=SNF32_08210;product=ABC transporter permease;protein_id=MDY4307324.1;transl_table=11 JAXGFV010000013.1 Genbank gene 53691 54077 . - . ID=gene-SNF32_08215;Name=SNF32_08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08215 JAXGFV010000013.1 Protein Homology CDS 53691 54077 . - 0 ID=cds-MDY4307325.1;Parent=gene-SNF32_08215;Dbxref=NCBI_GP:MDY4307325.1;Name=MDY4307325.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF017759.3;locus_tag=SNF32_08215;product=ABC transporter permease;protein_id=MDY4307325.1;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 54113 54849 . - . ID=gene-SNF32_08220;Name=SNF32_08220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08220;pseudo=true JAXGFV010000013.1 Protein Homology CDS 54113 54849 . - 0 ID=cds-SNF32_08220;Parent=gene-SNF32_08220;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002286199.1;locus_tag=SNF32_08220;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 54992 55416 . + . ID=gene-SNF32_08225;Name=SNF32_08225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08225;pseudo=true JAXGFV010000013.1 Protein Homology CDS 54992 55416 . + 0 ID=cds-SNF32_08225;Parent=gene-SNF32_08225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734190.1;locus_tag=SNF32_08225;product=HIT family protein;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 55409 55755 . + . ID=gene-SNF32_08230;Name=SNF32_08230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08230;pseudo=true JAXGFV010000013.1 Protein Homology CDS 55409 55755 . + 0 ID=cds-SNF32_08230;Parent=gene-SNF32_08230;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734189.1;locus_tag=SNF32_08230;product=YtxH domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 55923 56962 . + . ID=gene-SNF32_08235;Name=SNF32_08235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08235;pseudo=true JAXGFV010000013.1 Protein Homology CDS 55923 56962 . + 0 ID=cds-SNF32_08235;Parent=gene-SNF32_08235;Note=frameshifted;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734188.1;locus_tag=SNF32_08235;product=peptidylprolyl isomerase;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 57350 58238 . - . ID=gene-SNF32_08240;Name=SNF32_08240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08240;pseudo=true JAXGFV010000013.1 Protein Homology CDS 57350 58238 . - 0 ID=cds-SNF32_08240;Parent=gene-SNF32_08240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002366162.1;locus_tag=SNF32_08240;product=HD domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 58281 60989 . - . ID=gene-SNF32_08245;Name=SNF32_08245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08245;pseudo=true JAXGFV010000013.1 Protein Homology CDS 58281 60989 . - 0 ID=cds-SNF32_08245;Parent=gene-SNF32_08245;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016631406.1;locus_tag=SNF32_08245;product=AAA family ATPase;pseudo=true;transl_table=11 JAXGFV010000013.1 Genbank pseudogene 60986 62199 . - . ID=gene-SNF32_08250;Name=SNF32_08250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08250;pseudo=true JAXGFV010000013.1 Protein Homology CDS 60986 62199 . - 0 ID=cds-SNF32_08250;Parent=gene-SNF32_08250;Note=frameshifted;Ontology_term=GO:0003677,GO:0042578,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002301291.1;locus_tag=SNF32_08250;product=DNA repair exonuclease;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000130.1 1 640 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000130.1 Genbank region 1 640 . + . ID=JAXGFV010000130.1:1..640;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000130.1 Genbank gene 1 640 . + . ID=gene-SNF32_17240;Name=SNF32_17240;end_range=640,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17240;partial=true;start_range=.,1 JAXGFV010000130.1 Protein Homology CDS 1 640 . + 2 ID=cds-MDY4308240.1;Parent=gene-SNF32_17240;Dbxref=NCBI_GP:MDY4308240.1;Name=MDY4308240.1;end_range=640,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016250016.1;locus_tag=SNF32_17240;partial=true;product=hypothetical protein;protein_id=MDY4308240.1;start_range=.,1;transl_table=11 ##sequence-region JAXGFV010000131.1 1 633 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000131.1 Genbank region 1 633 . + . ID=JAXGFV010000131.1:1..633;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000131.1 Genbank gene 1 525 . + . ID=gene-SNF32_17245;Name=SNF32_17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17245;partial=true;start_range=.,1 JAXGFV010000131.1 Protein Homology CDS 1 525 . + 0 ID=cds-MDY4308241.1;Parent=gene-SNF32_17245;Dbxref=NCBI_GP:MDY4308241.1;Name=MDY4308241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016609797.1;locus_tag=SNF32_17245;partial=true;product=WxL domain-containing protein;protein_id=MDY4308241.1;start_range=.,1;transl_table=11 ##sequence-region JAXGFV010000132.1 1 630 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000132.1 Genbank region 1 630 . + . ID=JAXGFV010000132.1:1..630;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000132.1 Genbank gene 1 107 . - . ID=gene-SNF32_17250;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=SNF32_17250;partial=true;start_range=.,1 JAXGFV010000132.1 cmsearch rRNA 1 107 . - . ID=rna-SNF32_17250;Parent=gene-SNF32_17250;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=SNF32_17250;partial=true;product=5S ribosomal RNA;start_range=.,1 JAXGFV010000132.1 cmsearch exon 1 107 . - . ID=exon-SNF32_17250-1;Parent=rna-SNF32_17250;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=SNF32_17250;partial=true;product=5S ribosomal RNA;start_range=.,1 JAXGFV010000132.1 Genbank gene 198 630 . - . ID=gene-SNF32_17255;Name=SNF32_17255;end_range=630,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=SNF32_17255;partial=true JAXGFV010000132.1 cmsearch rRNA 198 630 . - . ID=rna-SNF32_17255;Parent=gene-SNF32_17255;Dbxref=RFAM:RF02541;end_range=630,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=SNF32_17255;partial=true;product=23S ribosomal RNA JAXGFV010000132.1 cmsearch exon 198 630 . - . ID=exon-SNF32_17255-1;Parent=rna-SNF32_17255;Dbxref=RFAM:RF02541;end_range=630,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=SNF32_17255;partial=true;product=23S ribosomal RNA ##sequence-region JAXGFV010000133.1 1 624 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000133.1 Genbank region 1 624 . + . ID=JAXGFV010000133.1:1..624;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000133.1 Genbank gene 1 624 . - . ID=gene-SNF32_17260;Name=SNF32_17260;end_range=624,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=SNF32_17260;partial=true;start_range=.,1 JAXGFV010000133.1 cmsearch rRNA 1 624 . - . ID=rna-SNF32_17260;Parent=gene-SNF32_17260;Dbxref=RFAM:RF02541;end_range=624,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=SNF32_17260;partial=true;product=23S ribosomal RNA;start_range=.,1 JAXGFV010000133.1 cmsearch exon 1 624 . - . ID=exon-SNF32_17260-1;Parent=rna-SNF32_17260;Dbxref=RFAM:RF02541;end_range=624,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=SNF32_17260;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region JAXGFV010000134.1 1 600 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000134.1 Genbank region 1 600 . + . ID=JAXGFV010000134.1:1..600;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000134.1 Genbank gene 172 330 . - . ID=gene-SNF32_17265;Name=SNF32_17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17265 JAXGFV010000134.1 GeneMarkS-2+ CDS 172 330 . - 0 ID=cds-MDY4308242.1;Parent=gene-SNF32_17265;Dbxref=NCBI_GP:MDY4308242.1;Name=MDY4308242.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_17265;product=hypothetical protein;protein_id=MDY4308242.1;transl_table=11 JAXGFV010000134.1 Genbank gene 312 584 . - . ID=gene-SNF32_17270;Name=SNF32_17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17270 JAXGFV010000134.1 GeneMarkS-2+ CDS 312 584 . - 0 ID=cds-MDY4308243.1;Parent=gene-SNF32_17270;Dbxref=NCBI_GP:MDY4308243.1;Name=MDY4308243.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_17270;product=hypothetical protein;protein_id=MDY4308243.1;transl_table=11 ##sequence-region JAXGFV010000135.1 1 572 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000135.1 Genbank region 1 572 . + . ID=JAXGFV010000135.1:1..572;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000135.1 Genbank gene 22 572 . + . ID=gene-SNF32_17275;Name=SNF32_17275;end_range=572,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17275;partial=true JAXGFV010000135.1 GeneMarkS-2+ CDS 22 572 . + 0 ID=cds-MDY4308244.1;Parent=gene-SNF32_17275;Dbxref=NCBI_GP:MDY4308244.1;Name=MDY4308244.1;end_range=572,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_17275;partial=true;product=WxL domain-containing protein;protein_id=MDY4308244.1;transl_table=11 ##sequence-region JAXGFV010000136.1 1 563 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000136.1 Genbank region 1 563 . + . ID=JAXGFV010000136.1:1..563;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 ##sequence-region JAXGFV010000137.1 1 527 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000137.1 Genbank region 1 527 . + . ID=JAXGFV010000137.1:1..527;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000137.1 Genbank gene 64 527 . + . ID=gene-SNF32_17280;Name=SNF32_17280;end_range=527,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17280;partial=true JAXGFV010000137.1 Protein Homology CDS 64 527 . + 0 ID=cds-MDY4308245.1;Parent=gene-SNF32_17280;Dbxref=NCBI_GP:MDY4308245.1;Name=MDY4308245.1;end_range=527,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017810.3;locus_tag=SNF32_17280;partial=true;product=DUF916 domain-containing protein;protein_id=MDY4308245.1;transl_table=11 ##sequence-region JAXGFV010000138.1 1 509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000138.1 Genbank region 1 509 . + . ID=JAXGFV010000138.1:1..509;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000138.1 Genbank pseudogene 120 477 . - . ID=gene-SNF32_17285;Name=SNF32_17285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_17285;pseudo=true JAXGFV010000138.1 Protein Homology CDS 120 477 . - 0 ID=cds-SNF32_17285;Parent=gene-SNF32_17285;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002335983.1;locus_tag=SNF32_17285;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000139.1 1 469 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000139.1 Genbank region 1 469 . + . ID=JAXGFV010000139.1:1..469;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 ##sequence-region JAXGFV010000014.1 1 50988 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000014.1 Genbank region 1 50988 . + . ID=JAXGFV010000014.1:1..50988;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000014.1 Genbank gene 137 865 . - . ID=gene-SNF32_08255;Name=SNF32_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08255 JAXGFV010000014.1 Protein Homology CDS 137 865 . - 0 ID=cds-MDY4307326.1;Parent=gene-SNF32_08255;Dbxref=NCBI_GP:MDY4307326.1;Name=MDY4307326.1;Ontology_term=GO:0006520,GO:0047689;gbkey=CDS;go_function=aspartate racemase activity|0047689||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005235674.1;locus_tag=SNF32_08255;product=amino acid racemase;protein_id=MDY4307326.1;transl_table=11 JAXGFV010000014.1 Genbank pseudogene 841 2100 . - . ID=gene-SNF32_08260;Name=SNF32_08260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08260;pseudo=true JAXGFV010000014.1 Protein Homology CDS 841 2100 . - 0 ID=cds-SNF32_08260;Parent=gene-SNF32_08260;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002294441.1;locus_tag=SNF32_08260;product=D-aspartate ligase;pseudo=true;transl_table=11 JAXGFV010000014.1 Genbank pseudogene 2338 5170 . - . ID=gene-SNF32_08265;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=pseudogene;locus_tag=SNF32_08265;pseudo=true JAXGFV010000014.1 Protein Homology CDS 2338 5170 . - 0 ID=cds-SNF32_08265;Parent=gene-SNF32_08265;Note=frameshifted;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010758798.1;locus_tag=SNF32_08265;product=excinuclease ABC subunit UvrA;pseudo=true;transl_table=11 JAXGFV010000014.1 Genbank pseudogene 5180 7171 . - . ID=gene-SNF32_08270;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=pseudogene;locus_tag=SNF32_08270;pseudo=true JAXGFV010000014.1 Protein Homology CDS 5180 7171 . - 0 ID=cds-SNF32_08270;Parent=gene-SNF32_08270;Note=frameshifted;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002984194.1;locus_tag=SNF32_08270;product=excinuclease ABC subunit UvrB;pseudo=true;transl_table=11 JAXGFV010000014.1 Genbank pseudogene 7603 8952 . + . ID=gene-SNF32_08275;Name=SNF32_08275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08275;pseudo=true JAXGFV010000014.1 Protein Homology CDS 7603 8952 . + 0 ID=cds-SNF32_08275;Parent=gene-SNF32_08275;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008382186.1;locus_tag=SNF32_08275;product=amino acid ABC transporter substrate-binding protein/permease;pseudo=true;transl_table=11 JAXGFV010000014.1 Genbank pseudogene 8965 9687 . + . ID=gene-SNF32_08280;Name=SNF32_08280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08280;pseudo=true JAXGFV010000014.1 Protein Homology CDS 8965 9687 . + 0 ID=cds-SNF32_08280;Parent=gene-SNF32_08280;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010760672.1;locus_tag=SNF32_08280;product=amino acid ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000014.1 Genbank pseudogene 9748 11378 . - . ID=gene-SNF32_08285;Name=SNF32_08285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08285;pseudo=true JAXGFV010000014.1 Protein Homology CDS 9748 11378 . - 0 ID=cds-SNF32_08285;Parent=gene-SNF32_08285;Note=frameshifted;Ontology_term=GO:0015926;gbkey=CDS;go_function=glucosidase activity|0015926||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735225.1;locus_tag=SNF32_08285;product=glycosyl hydrolase 53 family protein;pseudo=true;transl_table=11 JAXGFV010000014.1 Genbank pseudogene 11399 13077 . - . ID=gene-SNF32_08290;Name=SNF32_08290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08290;pseudo=true JAXGFV010000014.1 Protein Homology CDS 11399 13077 . - 0 ID=cds-SNF32_08290;Parent=gene-SNF32_08290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723882.1;locus_tag=SNF32_08290;product=PTS lactose transporter subunit IIBC;pseudo=true;transl_table=11 JAXGFV010000014.1 Genbank pseudogene 13096 13406 . - . ID=gene-SNF32_08295;Name=SNF32_08295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08295;pseudo=true JAXGFV010000014.1 Protein Homology CDS 13096 13406 . - 0 ID=cds-SNF32_08295;Parent=gene-SNF32_08295;Note=frameshifted;Ontology_term=GO:0009401,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003063087.1;locus_tag=SNF32_08295;product=PTS lactose/cellobiose transporter subunit IIA;pseudo=true;transl_table=11 JAXGFV010000014.1 Genbank pseudogene 13423 14822 . - . ID=gene-SNF32_08300;Name=lacG;gbkey=Gene;gene=lacG;gene_biotype=pseudogene;locus_tag=SNF32_08300;pseudo=true JAXGFV010000014.1 Protein Homology CDS 13423 14822 . - 0 ID=cds-SNF32_08300;Parent=gene-SNF32_08300;Note=frameshifted;Ontology_term=GO:0006012,GO:0004565,GO:0009341;gbkey=CDS;gene=lacG;go_component=beta-galactosidase complex|0009341||IEA;go_function=beta-galactosidase activity|0004565||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723883.1;locus_tag=SNF32_08300;product=6-phospho-beta-galactosidase;pseudo=true;transl_table=11 JAXGFV010000014.1 Genbank pseudogene 15049 15823 . + . ID=gene-SNF32_08305;Name=SNF32_08305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08305;pseudo=true JAXGFV010000014.1 Protein Homology CDS 15049 15823 . + 0 ID=cds-SNF32_08305;Parent=gene-SNF32_08305;Note=frameshifted;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723884.1;locus_tag=SNF32_08305;product=DeoR/GlpR family DNA-binding transcription regulator;pseudo=true;transl_table=11 JAXGFV010000014.1 Genbank pseudogene 15834 16536 . + . ID=gene-SNF32_08310;Name=SNF32_08310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08310;pseudo=true JAXGFV010000014.1 Protein Homology CDS 15834 16536 . + 0 ID=cds-SNF32_08310;Parent=gene-SNF32_08310;Note=frameshifted;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735220.1;locus_tag=SNF32_08310;product=HAD family phosphatase;pseudo=true;transl_table=11 JAXGFV010000014.1 Genbank pseudogene 16516 17719 . - . ID=gene-SNF32_08315;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=pseudogene;locus_tag=SNF32_08315;pseudo=true JAXGFV010000014.1 Protein Homology CDS 16516 17719 . - 0 ID=cds-SNF32_08315;Parent=gene-SNF32_08315;Note=frameshifted;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=dnaJ;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002321911.1;locus_tag=SNF32_08315;product=molecular chaperone DnaJ;pseudo=true;transl_table=11 JAXGFV010000014.1 Genbank pseudogene 18060 19896 . - . ID=gene-SNF32_08320;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=pseudogene;locus_tag=SNF32_08320;pseudo=true JAXGFV010000014.1 Protein Homology CDS 18060 19896 . - 0 ID=cds-SNF32_08320;Parent=gene-SNF32_08320;Note=frameshifted;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003690165.1;locus_tag=SNF32_08320;product=molecular chaperone DnaK;pseudo=true;transl_table=11 JAXGFV010000014.1 Genbank pseudogene 19952 20496 . - . ID=gene-SNF32_08325;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=pseudogene;locus_tag=SNF32_08325;pseudo=true JAXGFV010000014.1 Protein Homology CDS 19952 20496 . - 0 ID=cds-SNF32_08325;Parent=gene-SNF32_08325;Note=frameshifted;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002400298.1;locus_tag=SNF32_08325;product=nucleotide exchange factor GrpE;pseudo=true;transl_table=11 JAXGFV010000014.1 Genbank gene 20575 21618 . - . ID=gene-SNF32_08330;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=SNF32_08330 JAXGFV010000014.1 Protein Homology CDS 20575 21618 . - 0 ID=cds-MDY4307327.1;Parent=gene-SNF32_08330;Dbxref=NCBI_GP:MDY4307327.1;Name=MDY4307327.1;Ontology_term=GO:0009408,GO:0005737;gbkey=CDS;gene=hrcA;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735216.1;locus_tag=SNF32_08330;product=heat-inducible transcriptional repressor HrcA;protein_id=MDY4307327.1;transl_table=11 JAXGFV010000014.1 Genbank pseudogene 21848 23028 . - . ID=gene-SNF32_08335;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=pseudogene;locus_tag=SNF32_08335;pseudo=true JAXGFV010000014.1 Protein Homology CDS 21848 23028 . - 0 ID=cds-SNF32_08335;Parent=gene-SNF32_08335;Note=frameshifted;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735215.1;locus_tag=SNF32_08335;product=radical SAM family heme chaperone HemW;pseudo=true;transl_table=11 JAXGFV010000014.1 Genbank gene 23103 23474 . - . ID=gene-SNF32_08340;Name=SNF32_08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08340 JAXGFV010000014.1 Protein Homology CDS 23103 23474 . - 0 ID=cds-MDY4307328.1;Parent=gene-SNF32_08340;Dbxref=NCBI_GP:MDY4307328.1;Name=MDY4307328.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.3;locus_tag=SNF32_08340;product=tyrosine-type recombinase/integrase;protein_id=MDY4307328.1;transl_table=11 JAXGFV010000014.1 Genbank gene 23471 23707 . - . ID=gene-SNF32_08345;Name=SNF32_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08345 JAXGFV010000014.1 GeneMarkS-2+ CDS 23471 23707 . - 0 ID=cds-MDY4307329.1;Parent=gene-SNF32_08345;Dbxref=NCBI_GP:MDY4307329.1;Name=MDY4307329.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08345;product=hypothetical protein;protein_id=MDY4307329.1;transl_table=11 JAXGFV010000014.1 Genbank gene 23701 24495 . - . ID=gene-SNF32_08350;Name=SNF32_08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08350 JAXGFV010000014.1 Protein Homology CDS 23701 24495 . - 0 ID=cds-MDY4307330.1;Parent=gene-SNF32_08350;Dbxref=NCBI_GP:MDY4307330.1;Name=MDY4307330.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026010.3;locus_tag=SNF32_08350;product=hypothetical protein;protein_id=MDY4307330.1;transl_table=11 JAXGFV010000014.1 Genbank gene 25284 25586 . - . ID=gene-SNF32_08355;Name=SNF32_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08355 JAXGFV010000014.1 GeneMarkS-2+ CDS 25284 25586 . - 0 ID=cds-MDY4307331.1;Parent=gene-SNF32_08355;Dbxref=NCBI_GP:MDY4307331.1;Name=MDY4307331.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08355;product=hypothetical protein;protein_id=MDY4307331.1;transl_table=11 JAXGFV010000014.1 Genbank pseudogene 25776 26140 . - . ID=gene-SNF32_08360;Name=SNF32_08360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08360;pseudo=true JAXGFV010000014.1 Protein Homology CDS 25776 26140 . - 0 ID=cds-SNF32_08360;Parent=gene-SNF32_08360;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002365194.1;locus_tag=SNF32_08360;product=EF0163 family protein;pseudo=true;transl_table=11 JAXGFV010000014.1 Genbank gene 26321 26548 . - . ID=gene-SNF32_08365;Name=SNF32_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08365 JAXGFV010000014.1 Protein Homology CDS 26321 26548 . - 0 ID=cds-MDY4307332.1;Parent=gene-SNF32_08365;Dbxref=NCBI_GP:MDY4307332.1;Name=MDY4307332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010752073.1;locus_tag=SNF32_08365;product=hypothetical protein;protein_id=MDY4307332.1;transl_table=11 JAXGFV010000014.1 Genbank pseudogene 26565 27568 . - . ID=gene-SNF32_08370;Name=SNF32_08370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08370;pseudo=true JAXGFV010000014.1 Protein Homology CDS 26565 27568 . - 0 ID=cds-SNF32_08370;Parent=gene-SNF32_08370;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002402332.1;locus_tag=SNF32_08370;product=phage tail tip lysozyme;pseudo=true;transl_table=11 JAXGFV010000014.1 Genbank gene 27626 28339 . - . ID=gene-SNF32_08375;Name=SNF32_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08375 JAXGFV010000014.1 GeneMarkS-2+ CDS 27626 28339 . - 0 ID=cds-MDY4307333.1;Parent=gene-SNF32_08375;Dbxref=NCBI_GP:MDY4307333.1;Name=MDY4307333.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08375;product=hypothetical protein;protein_id=MDY4307333.1;transl_table=11 JAXGFV010000014.1 Genbank gene 28509 28724 . - . ID=gene-SNF32_08380;Name=SNF32_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08380 JAXGFV010000014.1 GeneMarkS-2+ CDS 28509 28724 . - 0 ID=cds-MDY4307334.1;Parent=gene-SNF32_08380;Dbxref=NCBI_GP:MDY4307334.1;Name=MDY4307334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08380;product=hypothetical protein;protein_id=MDY4307334.1;transl_table=11 JAXGFV010000014.1 Genbank gene 28867 29445 . - . ID=gene-SNF32_08385;Name=SNF32_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08385 JAXGFV010000014.1 GeneMarkS-2+ CDS 28867 29445 . - 0 ID=cds-MDY4307335.1;Parent=gene-SNF32_08385;Dbxref=NCBI_GP:MDY4307335.1;Name=MDY4307335.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08385;product=hypothetical protein;protein_id=MDY4307335.1;transl_table=11 JAXGFV010000014.1 Genbank gene 29653 30033 . - . ID=gene-SNF32_08390;Name=SNF32_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08390 JAXGFV010000014.1 Protein Homology CDS 29653 30033 . - 0 ID=cds-MDY4307336.1;Parent=gene-SNF32_08390;Dbxref=NCBI_GP:MDY4307336.1;Name=MDY4307336.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024254.3;locus_tag=SNF32_08390;product=ATP-binding protein;protein_id=MDY4307336.1;transl_table=11 JAXGFV010000014.1 Genbank gene 29997 30149 . - . ID=gene-SNF32_08395;Name=SNF32_08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08395 JAXGFV010000014.1 Protein Homology CDS 29997 30149 . - 0 ID=cds-MDY4307337.1;Parent=gene-SNF32_08395;Dbxref=NCBI_GP:MDY4307337.1;Name=MDY4307337.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024254.3;locus_tag=SNF32_08395;product=ATP-binding protein;protein_id=MDY4307337.1;transl_table=11 JAXGFV010000014.1 Genbank gene 30200 30625 . - . ID=gene-SNF32_08400;Name=SNF32_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08400 JAXGFV010000014.1 Protein Homology CDS 30200 30625 . - 0 ID=cds-MDY4307338.1;Parent=gene-SNF32_08400;Dbxref=NCBI_GP:MDY4307338.1;Name=MDY4307338.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024254.3;locus_tag=SNF32_08400;product=ATP-binding protein;protein_id=MDY4307338.1;transl_table=11 JAXGFV010000014.1 Genbank gene 30609 30899 . - . ID=gene-SNF32_08405;Name=SNF32_08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08405 JAXGFV010000014.1 Protein Homology CDS 30609 30899 . - 0 ID=cds-MDY4307339.1;Parent=gene-SNF32_08405;Dbxref=NCBI_GP:MDY4307339.1;Name=MDY4307339.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024254.3;locus_tag=SNF32_08405;product=ATP-binding protein;protein_id=MDY4307339.1;transl_table=11 JAXGFV010000014.1 Genbank gene 30932 31258 . - . ID=gene-SNF32_08410;Name=SNF32_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08410 JAXGFV010000014.1 GeneMarkS-2+ CDS 30932 31258 . - 0 ID=cds-MDY4307340.1;Parent=gene-SNF32_08410;Dbxref=NCBI_GP:MDY4307340.1;Name=MDY4307340.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08410;product=hypothetical protein;protein_id=MDY4307340.1;transl_table=11 JAXGFV010000014.1 Genbank gene 31240 31809 . - . ID=gene-SNF32_08415;Name=SNF32_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08415 JAXGFV010000014.1 GeneMarkS-2+ CDS 31240 31809 . - 0 ID=cds-MDY4307341.1;Parent=gene-SNF32_08415;Dbxref=NCBI_GP:MDY4307341.1;Name=MDY4307341.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08415;product=hypothetical protein;protein_id=MDY4307341.1;transl_table=11 JAXGFV010000014.1 Genbank gene 31761 32006 . - . ID=gene-SNF32_08420;Name=SNF32_08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08420 JAXGFV010000014.1 GeneMarkS-2+ CDS 31761 32006 . - 0 ID=cds-MDY4307342.1;Parent=gene-SNF32_08420;Dbxref=NCBI_GP:MDY4307342.1;Name=MDY4307342.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08420;product=hypothetical protein;protein_id=MDY4307342.1;transl_table=11 JAXGFV010000014.1 Genbank gene 31972 32148 . - . ID=gene-SNF32_08425;Name=SNF32_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08425 JAXGFV010000014.1 GeneMarkS-2+ CDS 31972 32148 . - 0 ID=cds-MDY4307343.1;Parent=gene-SNF32_08425;Dbxref=NCBI_GP:MDY4307343.1;Name=MDY4307343.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08425;product=hypothetical protein;protein_id=MDY4307343.1;transl_table=11 JAXGFV010000014.1 Genbank pseudogene 32162 32550 . - . ID=gene-SNF32_08430;Name=SNF32_08430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08430;pseudo=true JAXGFV010000014.1 Protein Homology CDS 32162 32550 . - 0 ID=cds-SNF32_08430;Parent=gene-SNF32_08430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016626678.1;locus_tag=SNF32_08430;product=conjugal transfer protein;pseudo=true;transl_table=11 JAXGFV010000014.1 Genbank gene 32560 32784 . - . ID=gene-SNF32_08435;Name=SNF32_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08435 JAXGFV010000014.1 Protein Homology CDS 32560 32784 . - 0 ID=cds-MDY4307344.1;Parent=gene-SNF32_08435;Dbxref=NCBI_GP:MDY4307344.1;Name=MDY4307344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002371416.1;locus_tag=SNF32_08435;product=hypothetical protein;protein_id=MDY4307344.1;transl_table=11 JAXGFV010000014.1 Genbank gene 32788 33036 . - . ID=gene-SNF32_08440;Name=SNF32_08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08440 JAXGFV010000014.1 Protein Homology CDS 32788 33036 . - 0 ID=cds-MDY4307345.1;Parent=gene-SNF32_08440;Dbxref=NCBI_GP:MDY4307345.1;Name=MDY4307345.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024056.3;locus_tag=SNF32_08440;product=conjugal transfer protein;protein_id=MDY4307345.1;transl_table=11 JAXGFV010000014.1 Genbank gene 33036 33314 . - . ID=gene-SNF32_08445;Name=SNF32_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08445 JAXGFV010000014.1 Protein Homology CDS 33036 33314 . - 0 ID=cds-MDY4307346.1;Parent=gene-SNF32_08445;Dbxref=NCBI_GP:MDY4307346.1;Name=MDY4307346.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024056.3;locus_tag=SNF32_08445;product=conjugal transfer protein;protein_id=MDY4307346.1;transl_table=11 JAXGFV010000014.1 Genbank gene 33260 33661 . - . ID=gene-SNF32_08450;Name=SNF32_08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08450 JAXGFV010000014.1 Protein Homology CDS 33260 33661 . - 0 ID=cds-MDY4307347.1;Parent=gene-SNF32_08450;Dbxref=NCBI_GP:MDY4307347.1;Name=MDY4307347.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024056.3;locus_tag=SNF32_08450;product=conjugal transfer protein;protein_id=MDY4307347.1;transl_table=11 JAXGFV010000014.1 Genbank pseudogene 33909 34056 . + . ID=gene-SNF32_08455;Name=SNF32_08455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08455;pseudo=true JAXGFV010000014.1 Protein Homology CDS 33909 34056 . + 0 ID=cds-SNF32_08455;Parent=gene-SNF32_08455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016176478.1;locus_tag=SNF32_08455;product=putative holin-like toxin;pseudo=true;transl_table=11 JAXGFV010000014.1 Genbank gene 34190 34726 . - . ID=gene-SNF32_08460;Name=SNF32_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08460 JAXGFV010000014.1 Protein Homology CDS 34190 34726 . - 0 ID=cds-MDY4307348.1;Parent=gene-SNF32_08460;Dbxref=NCBI_GP:MDY4307348.1;Name=MDY4307348.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037291.3;locus_tag=SNF32_08460;product=LPXTG cell wall anchor domain-containing protein;protein_id=MDY4307348.1;transl_table=11 JAXGFV010000014.1 Genbank gene 34717 34917 . - . ID=gene-SNF32_08465;Name=SNF32_08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08465 JAXGFV010000014.1 Protein Homology CDS 34717 34917 . - 0 ID=cds-MDY4307349.1;Parent=gene-SNF32_08465;Dbxref=NCBI_GP:MDY4307349.1;Name=MDY4307349.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037639.3;locus_tag=SNF32_08465;product=prealbumin-like fold domain-containing protein;protein_id=MDY4307349.1;transl_table=11 JAXGFV010000014.1 Genbank gene 34914 36263 . - . ID=gene-SNF32_08470;Name=SNF32_08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08470 JAXGFV010000014.1 Protein Homology CDS 34914 36263 . - 0 ID=cds-MDY4307350.1;Parent=gene-SNF32_08470;Dbxref=NCBI_GP:MDY4307350.1;Name=MDY4307350.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037639.3;locus_tag=SNF32_08470;product=SpaA isopeptide-forming pilin-related protein;protein_id=MDY4307350.1;transl_table=11 JAXGFV010000014.1 Genbank gene 36185 37027 . - . ID=gene-SNF32_08475;Name=SNF32_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08475 JAXGFV010000014.1 GeneMarkS-2+ CDS 36185 37027 . - 0 ID=cds-MDY4307351.1;Parent=gene-SNF32_08475;Dbxref=NCBI_GP:MDY4307351.1;Name=MDY4307351.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08475;product=hypothetical protein;protein_id=MDY4307351.1;transl_table=11 JAXGFV010000014.1 Genbank gene 36976 37236 . - . ID=gene-SNF32_08480;Name=SNF32_08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08480 JAXGFV010000014.1 GeneMarkS-2+ CDS 36976 37236 . - 0 ID=cds-MDY4307352.1;Parent=gene-SNF32_08480;Dbxref=NCBI_GP:MDY4307352.1;Name=MDY4307352.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08480;product=hypothetical protein;protein_id=MDY4307352.1;transl_table=11 JAXGFV010000014.1 Genbank gene 37424 38209 . - . ID=gene-SNF32_08485;Name=SNF32_08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08485 JAXGFV010000014.1 GeneMarkS-2+ CDS 37424 38209 . - 0 ID=cds-MDY4307353.1;Parent=gene-SNF32_08485;Dbxref=NCBI_GP:MDY4307353.1;Name=MDY4307353.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08485;product=hypothetical protein;protein_id=MDY4307353.1;transl_table=11 JAXGFV010000014.1 Genbank gene 38368 38625 . - . ID=gene-SNF32_08490;Name=SNF32_08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08490 JAXGFV010000014.1 GeneMarkS-2+ CDS 38368 38625 . - 0 ID=cds-MDY4307354.1;Parent=gene-SNF32_08490;Dbxref=NCBI_GP:MDY4307354.1;Name=MDY4307354.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08490;product=hypothetical protein;protein_id=MDY4307354.1;transl_table=11 JAXGFV010000014.1 Genbank gene 38850 39146 . - . ID=gene-SNF32_08495;Name=SNF32_08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08495 JAXGFV010000014.1 GeneMarkS-2+ CDS 38850 39146 . - 0 ID=cds-MDY4307355.1;Parent=gene-SNF32_08495;Dbxref=NCBI_GP:MDY4307355.1;Name=MDY4307355.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08495;product=hypothetical protein;protein_id=MDY4307355.1;transl_table=11 JAXGFV010000014.1 Genbank gene 39188 39703 . - . ID=gene-SNF32_08500;Name=SNF32_08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08500 JAXGFV010000014.1 GeneMarkS-2+ CDS 39188 39703 . - 0 ID=cds-MDY4307356.1;Parent=gene-SNF32_08500;Dbxref=NCBI_GP:MDY4307356.1;Name=MDY4307356.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08500;product=hypothetical protein;protein_id=MDY4307356.1;transl_table=11 JAXGFV010000014.1 Genbank gene 39863 40096 . - . ID=gene-SNF32_08505;Name=SNF32_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08505 JAXGFV010000014.1 GeneMarkS-2+ CDS 39863 40096 . - 0 ID=cds-MDY4307357.1;Parent=gene-SNF32_08505;Dbxref=NCBI_GP:MDY4307357.1;Name=MDY4307357.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08505;product=hypothetical protein;protein_id=MDY4307357.1;transl_table=11 JAXGFV010000014.1 Genbank pseudogene 40734 42010 . - . ID=gene-SNF32_08510;Name=SNF32_08510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08510;pseudo=true JAXGFV010000014.1 Protein Homology CDS 40734 42010 . - 0 ID=cds-SNF32_08510;Parent=gene-SNF32_08510;Note=frameshifted;Ontology_term=GO:0006270,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002314822.1;locus_tag=SNF32_08510;product=replication initiation factor domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000014.1 Genbank gene 42718 43146 . - . ID=gene-SNF32_08515;Name=SNF32_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08515 JAXGFV010000014.1 GeneMarkS-2+ CDS 42718 43146 . - 0 ID=cds-MDY4307358.1;Parent=gene-SNF32_08515;Dbxref=NCBI_GP:MDY4307358.1;Name=MDY4307358.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08515;product=hypothetical protein;protein_id=MDY4307358.1;transl_table=11 JAXGFV010000014.1 Genbank gene 43119 43889 . - . ID=gene-SNF32_08520;Name=SNF32_08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08520 JAXGFV010000014.1 Protein Homology CDS 43119 43889 . - 0 ID=cds-MDY4307359.1;Parent=gene-SNF32_08520;Dbxref=NCBI_GP:MDY4307359.1;Name=MDY4307359.1;Ontology_term=GO:0000166,GO:0003677,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF013727.3;locus_tag=SNF32_08520;product=FtsK/SpoIIIE domain-containing protein;protein_id=MDY4307359.1;transl_table=11 JAXGFV010000014.1 Genbank gene 43886 44143 . - . ID=gene-SNF32_08525;Name=SNF32_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08525 JAXGFV010000014.1 GeneMarkS-2+ CDS 43886 44143 . - 0 ID=cds-MDY4307360.1;Parent=gene-SNF32_08525;Dbxref=NCBI_GP:MDY4307360.1;Name=MDY4307360.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08525;product=hypothetical protein;protein_id=MDY4307360.1;transl_table=11 JAXGFV010000014.1 Genbank gene 44369 44572 . - . ID=gene-SNF32_08530;Name=SNF32_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08530 JAXGFV010000014.1 Protein Homology CDS 44369 44572 . - 0 ID=cds-MDY4307361.1;Parent=gene-SNF32_08530;Dbxref=NCBI_GP:MDY4307361.1;Name=MDY4307361.1;Ontology_term=GO:0004540,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: protein motif:HMM:NF014043.3;locus_tag=SNF32_08530;product=HepT-like ribonuclease domain-containing protein;protein_id=MDY4307361.1;transl_table=11 JAXGFV010000014.1 Genbank gene 44587 44736 . - . ID=gene-SNF32_08535;Name=SNF32_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08535 JAXGFV010000014.1 GeneMarkS-2+ CDS 44587 44736 . - 0 ID=cds-MDY4307362.1;Parent=gene-SNF32_08535;Dbxref=NCBI_GP:MDY4307362.1;Name=MDY4307362.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08535;product=hypothetical protein;protein_id=MDY4307362.1;transl_table=11 JAXGFV010000014.1 Genbank pseudogene 44726 45051 . - . ID=gene-SNF32_08540;Name=SNF32_08540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08540;pseudo=true JAXGFV010000014.1 Protein Homology CDS 44726 45051 . - 0 ID=cds-SNF32_08540;Parent=gene-SNF32_08540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002308938.1;locus_tag=SNF32_08540;product=nucleotidyltransferase domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000014.1 Genbank gene 45988 46383 . - . ID=gene-SNF32_08545;Name=SNF32_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08545 JAXGFV010000014.1 Protein Homology CDS 45988 46383 . - 0 ID=cds-MDY4307363.1;Parent=gene-SNF32_08545;Dbxref=NCBI_GP:MDY4307363.1;Name=MDY4307363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016615083.1;locus_tag=SNF32_08545;product=DUF961 family protein;protein_id=MDY4307363.1;transl_table=11 JAXGFV010000014.1 Genbank gene 46389 46712 . - . ID=gene-SNF32_08550;Name=SNF32_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08550 JAXGFV010000014.1 Protein Homology CDS 46389 46712 . - 0 ID=cds-MDY4307364.1;Parent=gene-SNF32_08550;Dbxref=NCBI_GP:MDY4307364.1;Name=MDY4307364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016624690.1;locus_tag=SNF32_08550;product=hypothetical protein;protein_id=MDY4307364.1;transl_table=11 JAXGFV010000014.1 Genbank gene 47506 47817 . - . ID=gene-SNF32_08555;Name=SNF32_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08555 JAXGFV010000014.1 Protein Homology CDS 47506 47817 . - 0 ID=cds-MDY4307365.1;Parent=gene-SNF32_08555;Dbxref=NCBI_GP:MDY4307365.1;Name=MDY4307365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016624687.1;locus_tag=SNF32_08555;product=hypothetical protein;protein_id=MDY4307365.1;transl_table=11 JAXGFV010000014.1 Genbank gene 47849 48169 . - . ID=gene-SNF32_08560;Name=SNF32_08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08560 JAXGFV010000014.1 Protein Homology CDS 47849 48169 . - 0 ID=cds-MDY4307366.1;Parent=gene-SNF32_08560;Dbxref=NCBI_GP:MDY4307366.1;Name=MDY4307366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016624686.1;locus_tag=SNF32_08560;product=hypothetical protein;protein_id=MDY4307366.1;transl_table=11 JAXGFV010000014.1 Genbank gene 48244 48438 . - . ID=gene-SNF32_08565;Name=SNF32_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08565 JAXGFV010000014.1 GeneMarkS-2+ CDS 48244 48438 . - 0 ID=cds-MDY4307367.1;Parent=gene-SNF32_08565;Dbxref=NCBI_GP:MDY4307367.1;Name=MDY4307367.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08565;product=hypothetical protein;protein_id=MDY4307367.1;transl_table=11 JAXGFV010000014.1 Genbank gene 49386 49472 . + . ID=gene-SNF32_08570;Name=SNF32_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08570 JAXGFV010000014.1 Protein Homology CDS 49386 49472 . + 0 ID=cds-MDY4307368.1;Parent=gene-SNF32_08570;Dbxref=NCBI_GP:MDY4307368.1;Name=MDY4307368.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.3;locus_tag=SNF32_08570;product=hypothetical protein;protein_id=MDY4307368.1;transl_table=11 JAXGFV010000014.1 Genbank gene 49885 50361 . + . ID=gene-SNF32_08575;Name=SNF32_08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08575 JAXGFV010000014.1 Protein Homology CDS 49885 50361 . + 0 ID=cds-MDY4307369.1;Parent=gene-SNF32_08575;Dbxref=NCBI_GP:MDY4307369.1;Name=MDY4307369.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017885.3;locus_tag=SNF32_08575;product=ImmA/IrrE family metallo-endopeptidase;protein_id=MDY4307369.1;transl_table=11 ##sequence-region JAXGFV010000140.1 1 449 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000140.1 Genbank region 1 449 . + . ID=JAXGFV010000140.1:1..449;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000140.1 Genbank gene 132 449 . - . ID=gene-SNF32_17290;Name=SNF32_17290;end_range=449,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17290;partial=true JAXGFV010000140.1 Protein Homology CDS 132 449 . - 0 ID=cds-MDY4308246.1;Parent=gene-SNF32_17290;Dbxref=NCBI_GP:MDY4308246.1;Name=MDY4308246.1;end_range=449,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734737.1;locus_tag=SNF32_17290;partial=true;product=hypothetical protein;protein_id=MDY4308246.1;transl_table=11 ##sequence-region JAXGFV010000141.1 1 448 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000141.1 Genbank region 1 448 . + . ID=JAXGFV010000141.1:1..448;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000141.1 Genbank gene 2 74 . + . ID=gene-SNF32_17295;Name=SNF32_17295;gbkey=Gene;gene_biotype=tRNA;locus_tag=SNF32_17295 JAXGFV010000141.1 tRNAscan-SE tRNA 2 74 . + . ID=rna-SNF32_17295;Parent=gene-SNF32_17295;anticodon=(pos:35..37);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_17295;product=tRNA-Lys JAXGFV010000141.1 tRNAscan-SE exon 2 74 . + . ID=exon-SNF32_17295-1;Parent=rna-SNF32_17295;anticodon=(pos:35..37);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_17295;product=tRNA-Lys JAXGFV010000141.1 Genbank gene 81 162 . + . ID=gene-SNF32_17300;Name=SNF32_17300;gbkey=Gene;gene_biotype=tRNA;locus_tag=SNF32_17300 JAXGFV010000141.1 tRNAscan-SE tRNA 81 162 . + . ID=rna-SNF32_17300;Parent=gene-SNF32_17300;anticodon=(pos:115..117);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_17300;product=tRNA-Leu JAXGFV010000141.1 tRNAscan-SE exon 81 162 . + . ID=exon-SNF32_17300-1;Parent=rna-SNF32_17300;anticodon=(pos:115..117);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_17300;product=tRNA-Leu JAXGFV010000141.1 Genbank gene 188 260 . + . ID=gene-SNF32_17305;Name=SNF32_17305;gbkey=Gene;gene_biotype=tRNA;locus_tag=SNF32_17305 JAXGFV010000141.1 tRNAscan-SE tRNA 188 260 . + . ID=rna-SNF32_17305;Parent=gene-SNF32_17305;anticodon=(pos:221..223);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_17305;product=tRNA-Thr JAXGFV010000141.1 tRNAscan-SE exon 188 260 . + . ID=exon-SNF32_17305-1;Parent=rna-SNF32_17305;anticodon=(pos:221..223);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_17305;product=tRNA-Thr JAXGFV010000141.1 Genbank gene 271 340 . + . ID=gene-SNF32_17310;Name=SNF32_17310;gbkey=Gene;gene_biotype=tRNA;locus_tag=SNF32_17310 JAXGFV010000141.1 tRNAscan-SE tRNA 271 340 . + . ID=rna-SNF32_17310;Parent=gene-SNF32_17310;anticodon=(pos:303..305);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_17310;product=tRNA-Gly JAXGFV010000141.1 tRNAscan-SE exon 271 340 . + . ID=exon-SNF32_17310-1;Parent=rna-SNF32_17310;anticodon=(pos:303..305);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_17310;product=tRNA-Gly JAXGFV010000141.1 Genbank gene 358 443 . + . ID=gene-SNF32_17315;Name=SNF32_17315;gbkey=Gene;gene_biotype=tRNA;locus_tag=SNF32_17315 JAXGFV010000141.1 tRNAscan-SE tRNA 358 443 . + . ID=rna-SNF32_17315;Parent=gene-SNF32_17315;anticodon=(pos:392..394);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_17315;product=tRNA-Leu JAXGFV010000141.1 tRNAscan-SE exon 358 443 . + . ID=exon-SNF32_17315-1;Parent=rna-SNF32_17315;anticodon=(pos:392..394);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_17315;product=tRNA-Leu ##sequence-region JAXGFV010000142.1 1 447 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000142.1 Genbank region 1 447 . + . ID=JAXGFV010000142.1:1..447;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 ##sequence-region JAXGFV010000143.1 1 418 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000143.1 Genbank region 1 418 . + . ID=JAXGFV010000143.1:1..418;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000143.1 Genbank gene 1 401 . - . ID=gene-SNF32_17320;Name=SNF32_17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17320;partial=true;start_range=.,1 JAXGFV010000143.1 Protein Homology CDS 1 401 . - 0 ID=cds-MDY4308247.1;Parent=gene-SNF32_17320;Dbxref=NCBI_GP:MDY4308247.1;Name=MDY4308247.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042900.1;locus_tag=SNF32_17320;partial=true;product=pectate lyase-like adhesive domain-containing protein;protein_id=MDY4308247.1;start_range=.,1;transl_table=11 ##sequence-region JAXGFV010000144.1 1 401 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000144.1 Genbank region 1 401 . + . ID=JAXGFV010000144.1:1..401;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000144.1 Genbank pseudogene 1 401 . - . ID=gene-SNF32_17325;Name=SNF32_17325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_17325;pseudo=true JAXGFV010000144.1 Protein Homology CDS 1 401 . - 2 ID=cds-SNF32_17325;Parent=gene-SNF32_17325;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016250015.1;locus_tag=SNF32_17325;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000145.1 1 399 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000145.1 Genbank region 1 399 . + . ID=JAXGFV010000145.1:1..399;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000145.1 Genbank pseudogene 1 327 . - . ID=gene-SNF32_17330;Name=SNF32_17330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_17330;pseudo=true JAXGFV010000145.1 Protein Homology CDS 1 327 . - 0 ID=cds-SNF32_17330;Parent=gene-SNF32_17330;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724622.1;locus_tag=SNF32_17330;product=LysM peptidoglycan-binding domain-containing protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000146.1 1 398 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000146.1 Genbank region 1 398 . + . ID=JAXGFV010000146.1:1..398;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 ##sequence-region JAXGFV010000147.1 1 389 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000147.1 Genbank region 1 389 . + . ID=JAXGFV010000147.1:1..389;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000147.1 Genbank gene 1 335 . + . ID=gene-SNF32_17335;Name=SNF32_17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17335;partial=true;start_range=.,1 JAXGFV010000147.1 GeneMarkS-2+ CDS 1 335 . + 2 ID=cds-MDY4308248.1;Parent=gene-SNF32_17335;Dbxref=NCBI_GP:MDY4308248.1;Name=MDY4308248.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_17335;partial=true;product=hypothetical protein;protein_id=MDY4308248.1;start_range=.,1;transl_table=11 ##sequence-region JAXGFV010000148.1 1 337 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000148.1 Genbank region 1 337 . + . ID=JAXGFV010000148.1:1..337;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000148.1 Genbank gene 1 323 . - . ID=gene-SNF32_17340;Name=SNF32_17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17340;partial=true;start_range=.,1 JAXGFV010000148.1 GeneMarkS-2+ CDS 1 323 . - 0 ID=cds-MDY4308249.1;Parent=gene-SNF32_17340;Dbxref=NCBI_GP:MDY4308249.1;Name=MDY4308249.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_17340;partial=true;product=hypothetical protein;protein_id=MDY4308249.1;start_range=.,1;transl_table=11 ##sequence-region JAXGFV010000149.1 1 337 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000149.1 Genbank region 1 337 . + . ID=JAXGFV010000149.1:1..337;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000149.1 Genbank gene 1 337 . + . ID=gene-SNF32_17345;Name=SNF32_17345;end_range=337,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17345;partial=true;start_range=.,1 JAXGFV010000149.1 Protein Homology CDS 1 337 . + 2 ID=cds-MDY4308250.1;Parent=gene-SNF32_17345;Dbxref=NCBI_GP:MDY4308250.1;Name=MDY4308250.1;end_range=337,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002345416.1;locus_tag=SNF32_17345;partial=true;product=triacylglycerol lipase;protein_id=MDY4308250.1;start_range=.,1;transl_table=11 ##sequence-region JAXGFV010000015.1 1 47093 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000015.1 Genbank region 1 47093 . + . ID=JAXGFV010000015.1:1..47093;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000015.1 Genbank pseudogene 414 1362 . + . ID=gene-SNF32_08580;Name=SNF32_08580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08580;pseudo=true JAXGFV010000015.1 Protein Homology CDS 414 1362 . + 0 ID=cds-SNF32_08580;Parent=gene-SNF32_08580;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734085.1;locus_tag=SNF32_08580;product=metal ABC transporter substrate-binding protein;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 1381 2060 . + . ID=gene-SNF32_08585;Name=SNF32_08585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08585;pseudo=true JAXGFV010000015.1 Protein Homology CDS 1381 2060 . + 0 ID=cds-SNF32_08585;Parent=gene-SNF32_08585;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287343.1;locus_tag=SNF32_08585;product=metal ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank gene 2033 2884 . + . ID=gene-SNF32_08590;Name=SNF32_08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08590 JAXGFV010000015.1 Protein Homology CDS 2033 2884 . + 0 ID=cds-MDY4307370.1;Parent=gene-SNF32_08590;Dbxref=NCBI_GP:MDY4307370.1;Name=MDY4307370.1;Ontology_term=GO:0030001,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003128830.1;locus_tag=SNF32_08590;product=metal ABC transporter permease;protein_id=MDY4307370.1;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 3060 3843 . + . ID=gene-SNF32_08595;Name=purR;gbkey=Gene;gene=purR;gene_biotype=pseudogene;locus_tag=SNF32_08595;pseudo=true JAXGFV010000015.1 Protein Homology CDS 3060 3843 . + 0 ID=cds-SNF32_08595;Parent=gene-SNF32_08595;Note=frameshifted;Ontology_term=GO:0006355,GO:0009116,GO:0045892,GO:0045982,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,nucleoside metabolic process|0009116||IEA,negative regulation of DNA-templated transcription|0045892||IEA,negative regulation of purine nucleobase metabolic process|0045982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002321006.1;locus_tag=SNF32_08595;product=pur operon repressor;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 3998 5369 . + . ID=gene-SNF32_08600;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=pseudogene;locus_tag=SNF32_08600;pseudo=true JAXGFV010000015.1 Protein Homology CDS 3998 5369 . + 0 ID=cds-SNF32_08600;Parent=gene-SNF32_08600;Note=frameshifted;Ontology_term=GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002346271.1;locus_tag=SNF32_08600;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 5459 6426 . + . ID=gene-SNF32_08605;Name=SNF32_08605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08605;pseudo=true JAXGFV010000015.1 Protein Homology CDS 5459 6426 . + 0 ID=cds-SNF32_08605;Parent=gene-SNF32_08605;Note=frameshifted;Ontology_term=GO:0009156,GO:0004749;gbkey=CDS;go_function=ribose phosphate diphosphokinase activity|0004749||IEA;go_process=ribonucleoside monophosphate biosynthetic process|0009156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010756328.1;locus_tag=SNF32_08605;product=ribose-phosphate diphosphokinase;pseudo=true;transl_table=11 JAXGFV010000015.1 cmsearch riboswitch 6450 6552 . + . ID=id-JAXGFV010000015.1:6450..6552;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch JAXGFV010000015.1 Genbank gene 6634 7218 . + . ID=gene-SNF32_08610;Name=thiT;gbkey=Gene;gene=thiT;gene_biotype=protein_coding;locus_tag=SNF32_08610 JAXGFV010000015.1 Protein Homology CDS 6634 7218 . + 0 ID=cds-MDY4307371.1;Parent=gene-SNF32_08610;Dbxref=NCBI_GP:MDY4307371.1;Name=MDY4307371.1;Ontology_term=GO:0015888,GO:0015234;gbkey=CDS;gene=thiT;go_function=thiamine transmembrane transporter activity|0015234||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722355.1;locus_tag=SNF32_08610;product=energy-coupled thiamine transporter ThiT;protein_id=MDY4307371.1;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 7272 8044 . - . ID=gene-SNF32_08615;Name=SNF32_08615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08615;pseudo=true JAXGFV010000015.1 Protein Homology CDS 7272 8044 . - 0 ID=cds-SNF32_08615;Parent=gene-SNF32_08615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734092.1;locus_tag=SNF32_08615;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank gene 8383 8583 . + . ID=gene-SNF32_08620;Name=SNF32_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08620 JAXGFV010000015.1 GeneMarkS-2+ CDS 8383 8583 . + 0 ID=cds-MDY4307372.1;Parent=gene-SNF32_08620;Dbxref=NCBI_GP:MDY4307372.1;Name=MDY4307372.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08620;product=hypothetical protein;protein_id=MDY4307372.1;transl_table=11 JAXGFV010000015.1 Genbank gene 8603 9103 . + . ID=gene-SNF32_08625;Name=SNF32_08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08625 JAXGFV010000015.1 Protein Homology CDS 8603 9103 . + 0 ID=cds-MDY4307373.1;Parent=gene-SNF32_08625;Dbxref=NCBI_GP:MDY4307373.1;Name=MDY4307373.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: protein motif:HMM:NF013862.3;locus_tag=SNF32_08625;product=patatin-like phospholipase family protein;protein_id=MDY4307373.1;transl_table=11 JAXGFV010000015.1 Genbank gene 9115 9318 . + . ID=gene-SNF32_08630;Name=SNF32_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08630 JAXGFV010000015.1 Protein Homology CDS 9115 9318 . + 0 ID=cds-MDY4307374.1;Parent=gene-SNF32_08630;Dbxref=NCBI_GP:MDY4307374.1;Name=MDY4307374.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: protein motif:HMM:NF013862.3;locus_tag=SNF32_08630;product=patatin-like phospholipase family protein;protein_id=MDY4307374.1;transl_table=11 JAXGFV010000015.1 Genbank gene 9312 9629 . + . ID=gene-SNF32_08635;Name=SNF32_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08635 JAXGFV010000015.1 GeneMarkS-2+ CDS 9312 9629 . + 0 ID=cds-MDY4307375.1;Parent=gene-SNF32_08635;Dbxref=NCBI_GP:MDY4307375.1;Name=MDY4307375.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08635;product=hypothetical protein;protein_id=MDY4307375.1;transl_table=11 JAXGFV010000015.1 Genbank gene 9614 9880 . + . ID=gene-SNF32_08640;Name=SNF32_08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08640 JAXGFV010000015.1 GeneMarkS-2+ CDS 9614 9880 . + 0 ID=cds-MDY4307376.1;Parent=gene-SNF32_08640;Dbxref=NCBI_GP:MDY4307376.1;Name=MDY4307376.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08640;product=hypothetical protein;protein_id=MDY4307376.1;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 9927 10144 . + . ID=gene-SNF32_08645;Name=SNF32_08645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08645;pseudo=true JAXGFV010000015.1 Protein Homology CDS 9927 10144 . + 0 ID=cds-SNF32_08645;Parent=gene-SNF32_08645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875139.1;locus_tag=SNF32_08645;product=YdbC family protein;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 10163 11051 . + . ID=gene-SNF32_08650;Name=SNF32_08650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08650;pseudo=true JAXGFV010000015.1 Protein Homology CDS 10163 11051 . + 0 ID=cds-SNF32_08650;Parent=gene-SNF32_08650;Note=frameshifted;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002301205.1;locus_tag=SNF32_08650;product=YicC/YloC family endoribonuclease;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank gene 11306 11920 . + . ID=gene-SNF32_08655;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=SNF32_08655 JAXGFV010000015.1 Protein Homology CDS 11306 11920 . + 0 ID=cds-MDY4307377.1;Parent=gene-SNF32_08655;Dbxref=NCBI_GP:MDY4307377.1;Name=MDY4307377.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010766465.1;locus_tag=SNF32_08655;product=guanylate kinase;protein_id=MDY4307377.1;transl_table=11 JAXGFV010000015.1 Genbank gene 11925 12230 . + . ID=gene-SNF32_08660;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=SNF32_08660 JAXGFV010000015.1 Protein Homology CDS 11925 12230 . + 0 ID=cds-MDY4307378.1;Parent=gene-SNF32_08660;Dbxref=NCBI_GP:MDY4307378.1;Name=MDY4307378.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287365.1;locus_tag=SNF32_08660;product=DNA-directed RNA polymerase subunit omega;protein_id=MDY4307378.1;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 12419 14821 . + . ID=gene-SNF32_08665;Name=priA;gbkey=Gene;gene=priA;gene_biotype=pseudogene;locus_tag=SNF32_08665;pseudo=true JAXGFV010000015.1 Protein Homology CDS 12419 14821 . + 0 ID=cds-SNF32_08665;Parent=gene-SNF32_08665;Note=frameshifted;Ontology_term=GO:0006260,GO:0032508,GO:0003678;gbkey=CDS;gene=priA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA duplex unwinding|0032508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002307710.1;locus_tag=SNF32_08665;product=primosomal protein N';pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 14835 15324 . + . ID=gene-SNF32_08670;Name=def;gbkey=Gene;gene=def;gene_biotype=pseudogene;locus_tag=SNF32_08670;pseudo=true JAXGFV010000015.1 Protein Homology CDS 14835 15324 . + 0 ID=cds-SNF32_08670;Parent=gene-SNF32_08670;Note=frameshifted%3B internal stop;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287369.1;locus_tag=SNF32_08670;product=peptide deformylase;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 15317 16258 . + . ID=gene-SNF32_08675;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=pseudogene;locus_tag=SNF32_08675;pseudo=true JAXGFV010000015.1 Protein Homology CDS 15317 16258 . + 0 ID=cds-SNF32_08675;Parent=gene-SNF32_08675;Note=frameshifted;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287372.1;locus_tag=SNF32_08675;product=methionyl-tRNA formyltransferase;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 16278 17652 . + . ID=gene-SNF32_08680;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=pseudogene;locus_tag=SNF32_08680;pseudo=true JAXGFV010000015.1 Protein Homology CDS 16278 17652 . + 0 ID=cds-SNF32_08680;Parent=gene-SNF32_08680;Note=frameshifted;Ontology_term=GO:0001510,GO:0006355,GO:0003723,GO:0008168;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016618593.1;locus_tag=SNF32_08680;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 17625 18364 . + . ID=gene-SNF32_08685;Name=SNF32_08685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08685;pseudo=true JAXGFV010000015.1 Protein Homology CDS 17625 18364 . + 0 ID=cds-SNF32_08685;Parent=gene-SNF32_08685;Note=frameshifted;Ontology_term=GO:0006470,GO:0004722;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010750164.1;locus_tag=SNF32_08685;product=Stp1/IreP family PP2C-type Ser/Thr phosphatase;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 18361 20407 . + . ID=gene-SNF32_08690;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=pseudogene;locus_tag=SNF32_08690;pseudo=true JAXGFV010000015.1 Protein Homology CDS 18361 20407 . + 0 ID=cds-SNF32_08690;Parent=gene-SNF32_08690;Note=frameshifted;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknB;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734103.1;locus_tag=SNF32_08690;product=Stk1 family PASTA domain-containing Ser/Thr kinase;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 20556 21454 . + . ID=gene-SNF32_08695;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=pseudogene;locus_tag=SNF32_08695;pseudo=true JAXGFV010000015.1 Protein Homology CDS 20556 21454 . + 0 ID=cds-SNF32_08695;Parent=gene-SNF32_08695;Note=frameshifted;Ontology_term=GO:0006412,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010738631.1;locus_tag=SNF32_08695;product=ribosome small subunit-dependent GTPase A;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 21467 22115 . + . ID=gene-SNF32_08700;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=pseudogene;locus_tag=SNF32_08700;pseudo=true JAXGFV010000015.1 Protein Homology CDS 21467 22115 . + 0 ID=cds-SNF32_08700;Parent=gene-SNF32_08700;Note=frameshifted;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722345.1;locus_tag=SNF32_08700;product=ribulose-phosphate 3-epimerase;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 22115 22752 . + . ID=gene-SNF32_08705;Name=SNF32_08705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08705;pseudo=true JAXGFV010000015.1 Protein Homology CDS 22115 22752 . + 0 ID=cds-SNF32_08705;Parent=gene-SNF32_08705;Note=frameshifted;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002341868.1;locus_tag=SNF32_08705;product=thiamine diphosphokinase;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 22911 23764 . + . ID=gene-SNF32_08710;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=pseudogene;locus_tag=SNF32_08710;pseudo=true JAXGFV010000015.1 Protein Homology CDS 22911 23764 . + 0 ID=cds-SNF32_08710;Parent=gene-SNF32_08710;Note=frameshifted;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002400920.1;locus_tag=SNF32_08710;product=rod shape-determining protein MreC;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 23785 24290 . + . ID=gene-SNF32_08715;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=pseudogene;locus_tag=SNF32_08715;pseudo=true JAXGFV010000015.1 Protein Homology CDS 23785 24290 . + 0 ID=cds-SNF32_08715;Parent=gene-SNF32_08715;Note=frameshifted;Ontology_term=GO:0008360,GO:0003674;gbkey=CDS;gene=mreD;go_function=molecular_function|0003674||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734108.1;locus_tag=SNF32_08715;product=rod shape-determining protein MreD;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 24645 26152 . + . ID=gene-SNF32_08720;Name=SNF32_08720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08720;pseudo=true JAXGFV010000015.1 Protein Homology CDS 24645 26152 . + 0 ID=cds-SNF32_08720;Parent=gene-SNF32_08720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737285.1;locus_tag=SNF32_08720;product=NlpC/P60 family protein;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 26276 28068 . - . ID=gene-SNF32_08725;Name=SNF32_08725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08725;pseudo=true JAXGFV010000015.1 Protein Homology CDS 26276 28068 . - 0 ID=cds-SNF32_08725;Parent=gene-SNF32_08725;Note=frameshifted;Ontology_term=GO:0006508,GO:0004222,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629808.1;locus_tag=SNF32_08725;product=M3 family oligoendopeptidase;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank gene 28189 28695 . + . ID=gene-SNF32_08730;Name=SNF32_08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08730 JAXGFV010000015.1 Protein Homology CDS 28189 28695 . + 0 ID=cds-MDY4307379.1;Parent=gene-SNF32_08730;Dbxref=NCBI_GP:MDY4307379.1;Name=MDY4307379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722340.1;locus_tag=SNF32_08730;product=VanZ family protein;protein_id=MDY4307379.1;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 28730 30140 . - . ID=gene-SNF32_08735;Name=SNF32_08735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08735;pseudo=true JAXGFV010000015.1 Protein Homology CDS 28730 30140 . - 0 ID=cds-SNF32_08735;Parent=gene-SNF32_08735;Note=frameshifted;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287397.1;locus_tag=SNF32_08735;product=L%2CD-transpeptidase family protein;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 30437 31412 . - . ID=gene-SNF32_08740;Name=SNF32_08740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08740;pseudo=true JAXGFV010000015.1 Protein Homology CDS 30437 31412 . - 0 ID=cds-SNF32_08740;Parent=gene-SNF32_08740;Note=frameshifted;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014834417.1;locus_tag=SNF32_08740;product=L-lactate dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 31753 32312 . + . ID=gene-SNF32_08745;Name=pth;gbkey=Gene;gene=pth;gene_biotype=pseudogene;locus_tag=SNF32_08745;pseudo=true JAXGFV010000015.1 Protein Homology CDS 31753 32312 . + 0 ID=cds-SNF32_08745;Parent=gene-SNF32_08745;Note=frameshifted;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002348722.1;locus_tag=SNF32_08745;product=aminoacyl-tRNA hydrolase;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 32330 35843 . + . ID=gene-SNF32_08750;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=pseudogene;locus_tag=SNF32_08750;pseudo=true JAXGFV010000015.1 Protein Homology CDS 32330 35843 . + 0 ID=cds-SNF32_08750;Parent=gene-SNF32_08750;Note=frameshifted;Ontology_term=GO:0006281,GO:0003690,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=mfd;go_function=double-stranded DNA binding|0003690||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002315907.1;locus_tag=SNF32_08750;product=transcription-repair coupling factor;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 35859 37437 . + . ID=gene-SNF32_08755;Name=SNF32_08755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08755;pseudo=true JAXGFV010000015.1 Protein Homology CDS 35859 37437 . + 0 ID=cds-SNF32_08755;Parent=gene-SNF32_08755;Note=frameshifted;Ontology_term=GO:0009252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010763792.1;locus_tag=SNF32_08755;product=polysaccharide biosynthesis protein;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 37460 37734 . + . ID=gene-SNF32_08760;Name=SNF32_08760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08760;pseudo=true JAXGFV010000015.1 Protein Homology CDS 37460 37734 . + 0 ID=cds-SNF32_08760;Parent=gene-SNF32_08760;Note=frameshifted;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010720581.1;locus_tag=SNF32_08760;product=RNA-binding S4 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 37798 38222 . + . ID=gene-SNF32_08765;Name=SNF32_08765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08765;pseudo=true JAXGFV010000015.1 Protein Homology CDS 37798 38222 . + 0 ID=cds-SNF32_08765;Parent=gene-SNF32_08765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287409.1;locus_tag=SNF32_08765;product=septum formation initiator family protein;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 38267 38736 . + . ID=gene-SNF32_08770;Name=SNF32_08770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08770;pseudo=true JAXGFV010000015.1 Protein Homology CDS 38267 38736 . + 0 ID=cds-SNF32_08770;Parent=gene-SNF32_08770;Note=frameshifted;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287412.1;locus_tag=SNF32_08770;product=S1 domain-containing RNA-binding protein;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank gene 38815 39402 . + . ID=gene-SNF32_08775;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=SNF32_08775 JAXGFV010000015.1 Protein Homology CDS 38815 39402 . + 0 ID=cds-MDY4307380.1;Parent=gene-SNF32_08775;Dbxref=NCBI_GP:MDY4307380.1;Name=MDY4307380.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: protein motif:HMM:NF013348.3;locus_tag=SNF32_08775;product=tRNA lysidine(34) synthetase TilS;protein_id=MDY4307380.1;transl_table=11 JAXGFV010000015.1 Genbank gene 39539 39841 . + . ID=gene-SNF32_08780;Name=SNF32_08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08780 JAXGFV010000015.1 GeneMarkS-2+ CDS 39539 39841 . + 0 ID=cds-MDY4307381.1;Parent=gene-SNF32_08780;Dbxref=NCBI_GP:MDY4307381.1;Name=MDY4307381.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08780;product=hypothetical protein;protein_id=MDY4307381.1;transl_table=11 JAXGFV010000015.1 Genbank gene 39925 40110 . + . ID=gene-SNF32_08785;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=SNF32_08785 JAXGFV010000015.1 GeneMarkS-2+ CDS 39925 40110 . + 0 ID=cds-MDY4307382.1;Parent=gene-SNF32_08785;Dbxref=NCBI_GP:MDY4307382.1;Name=MDY4307382.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08785;product=tRNA lysidine(34) synthetase TilS;protein_id=MDY4307382.1;transl_table=11 JAXGFV010000015.1 Genbank gene 40241 40786 . + . ID=gene-SNF32_08790;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=SNF32_08790 JAXGFV010000015.1 Protein Homology CDS 40241 40786 . + 0 ID=cds-MDY4307383.1;Parent=gene-SNF32_08790;Dbxref=NCBI_GP:MDY4307383.1;Name=MDY4307383.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875186.1;locus_tag=SNF32_08790;product=hypoxanthine phosphoribosyltransferase;protein_id=MDY4307383.1;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 40896 42969 . + . ID=gene-SNF32_08795;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=pseudogene;locus_tag=SNF32_08795;pseudo=true JAXGFV010000015.1 Protein Homology CDS 40896 42969 . + 0 ID=cds-SNF32_08795;Parent=gene-SNF32_08795;Note=frameshifted;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887;gbkey=CDS;gene=ftsH;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734123.1;locus_tag=SNF32_08795;product=ATP-dependent zinc metalloprotease FtsH;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 43122 44008 . + . ID=gene-SNF32_08800;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=pseudogene;locus_tag=SNF32_08800;pseudo=true JAXGFV010000015.1 Protein Homology CDS 43122 44008 . + 0 ID=cds-SNF32_08800;Parent=gene-SNF32_08800;Note=frameshifted;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: protein motif:HMM:NF013589.3;locus_tag=SNF32_08800;product=Hsp33 family molecular chaperone HslO;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 44009 45018 . + . ID=gene-SNF32_08805;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=pseudogene;locus_tag=SNF32_08805;pseudo=true JAXGFV010000015.1 Protein Homology CDS 44009 45018 . + 0 ID=cds-SNF32_08805;Parent=gene-SNF32_08805;Note=frameshifted;Ontology_term=GO:0008033,GO:0003824,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=catalytic activity|0003824||IEA,oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002307694.1;locus_tag=SNF32_08805;product=tRNA dihydrouridine synthase DusB;pseudo=true;transl_table=11 JAXGFV010000015.1 Genbank pseudogene 45119 46614 . + . ID=gene-SNF32_08810;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=pseudogene;locus_tag=SNF32_08810;pseudo=true JAXGFV010000015.1 Protein Homology CDS 45119 46614 . + 0 ID=cds-SNF32_08810;Parent=gene-SNF32_08810;Note=frameshifted;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016628008.1;locus_tag=SNF32_08810;product=lysine--tRNA ligase;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000150.1 1 327 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000150.1 Genbank region 1 327 . + . ID=JAXGFV010000150.1:1..327;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000150.1 Genbank gene 1 227 . - . ID=gene-SNF32_17350;Name=SNF32_17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17350;partial=true;start_range=.,1 JAXGFV010000150.1 Protein Homology CDS 1 227 . - 0 ID=cds-MDY4308251.1;Parent=gene-SNF32_17350;Dbxref=NCBI_GP:MDY4308251.1;Name=MDY4308251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724481.1;locus_tag=SNF32_17350;partial=true;product=TIGR04197 family type VII secretion effector;protein_id=MDY4308251.1;start_range=.,1;transl_table=11 ##sequence-region JAXGFV010000151.1 1 324 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000151.1 Genbank region 1 324 . + . ID=JAXGFV010000151.1:1..324;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000151.1 Genbank gene 1 188 . + . ID=gene-SNF32_17355;Name=SNF32_17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17355;partial=true;start_range=.,1 JAXGFV010000151.1 Protein Homology CDS 1 188 . + 2 ID=cds-MDY4308252.1;Parent=gene-SNF32_17355;Dbxref=NCBI_GP:MDY4308252.1;Name=MDY4308252.1;Ontology_term=GO:0006508,GO:0005524,GO:0008233,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF015377.3;locus_tag=SNF32_17355;partial=true;product=cysteine peptidase family C39 domain-containing protein;protein_id=MDY4308252.1;start_range=.,1;transl_table=11 ##sequence-region JAXGFV010000152.1 1 320 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000152.1 Genbank region 1 320 . + . ID=JAXGFV010000152.1:1..320;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000152.1 Genbank gene 66 320 . + . ID=gene-SNF32_17360;Name=SNF32_17360;end_range=320,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_17360;partial=true JAXGFV010000152.1 GeneMarkS-2+ CDS 66 320 . + 0 ID=cds-MDY4308253.1;Parent=gene-SNF32_17360;Dbxref=NCBI_GP:MDY4308253.1;Name=MDY4308253.1;end_range=320,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_17360;partial=true;product=M protein trans-acting positive regulator;protein_id=MDY4308253.1;transl_table=11 ##sequence-region JAXGFV010000016.1 1 46263 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000016.1 Genbank region 1 46263 . + . ID=JAXGFV010000016.1:1..46263;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000016.1 Genbank pseudogene 1 198 . + . ID=gene-SNF32_08815;Name=SNF32_08815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08815;pseudo=true JAXGFV010000016.1 Protein Homology CDS 1 198 . + 1 ID=cds-SNF32_08815;Parent=gene-SNF32_08815;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002310144.1;locus_tag=SNF32_08815;product=DUF4093 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 191 1131 . + . ID=gene-SNF32_08820;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=pseudogene;locus_tag=SNF32_08820;pseudo=true JAXGFV010000016.1 Protein Homology CDS 191 1131 . + 0 ID=cds-SNF32_08820;Parent=gene-SNF32_08820;Note=frameshifted;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016630154.1;locus_tag=SNF32_08820;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 1324 1949 . + . ID=gene-SNF32_08825;Name=SNF32_08825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08825;pseudo=true JAXGFV010000016.1 Protein Homology CDS 1324 1949 . + 0 ID=cds-SNF32_08825;Parent=gene-SNF32_08825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736135.1;locus_tag=SNF32_08825;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank gene 2042 3151 . - . ID=gene-SNF32_08830;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=SNF32_08830 JAXGFV010000016.1 Protein Homology CDS 2042 3151 . - 0 ID=cds-MDY4307384.1;Parent=gene-SNF32_08830;Dbxref=NCBI_GP:MDY4307384.1;Name=MDY4307384.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016625778.1;locus_tag=SNF32_08830;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=MDY4307384.1;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 3562 3794 . + . ID=gene-SNF32_08835;Name=SNF32_08835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08835;pseudo=true JAXGFV010000016.1 Protein Homology CDS 3562 3794 . + 0 ID=cds-SNF32_08835;Parent=gene-SNF32_08835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736133.1;locus_tag=SNF32_08835;product=antitoxin MazE;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 3795 4120 . + . ID=gene-SNF32_08840;Name=SNF32_08840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08840;pseudo=true JAXGFV010000016.1 Protein Homology CDS 3795 4120 . + 0 ID=cds-SNF32_08840;Parent=gene-SNF32_08840;Note=frameshifted;Ontology_term=GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002318875.1;locus_tag=SNF32_08840;product=type II toxin-antitoxin system PemK/MazF family toxin;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 4182 4612 . + . ID=gene-SNF32_08845;Name=mgsA;gbkey=Gene;gene=mgsA;gene_biotype=pseudogene;locus_tag=SNF32_08845;pseudo=true JAXGFV010000016.1 Protein Homology CDS 4182 4612 . + 0 ID=cds-SNF32_08845;Parent=gene-SNF32_08845;Note=frameshifted;Ontology_term=GO:0006007,GO:0019242,GO:0008929;gbkey=CDS;gene=mgsA;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=glucose catabolic process|0006007||IEA,methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722486.1;locus_tag=SNF32_08845;product=methylglyoxal synthase;pseudo=true;transl_table=11 JAXGFV010000016.1 cmsearch riboswitch 4766 4863 . + . ID=id-JAXGFV010000016.1:4766..4863;Dbxref=RFAM:RF01831;Note=THF riboswitches regulate genes encoding folate transporters and folate metabolism%3B They are most commonly found in Clostridiales and Lactobacillales;bound_moiety=tetrahydrofolate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch JAXGFV010000016.1 Genbank pseudogene 4900 5432 . + . ID=gene-SNF32_08850;Name=SNF32_08850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08850;pseudo=true JAXGFV010000016.1 Protein Homology CDS 4900 5432 . + 0 ID=cds-SNF32_08850;Parent=gene-SNF32_08850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002330706.1;locus_tag=SNF32_08850;product=folate family ECF transporter S component;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 5490 7229 . - . ID=gene-SNF32_08855;Name=SNF32_08855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08855;pseudo=true JAXGFV010000016.1 Protein Homology CDS 5490 7229 . - 0 ID=cds-SNF32_08855;Parent=gene-SNF32_08855;Note=frameshifted;Ontology_term=GO:0005524,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010750475.1;locus_tag=SNF32_08855;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 7281 8991 . - . ID=gene-SNF32_08860;Name=SNF32_08860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08860;pseudo=true JAXGFV010000016.1 Protein Homology CDS 7281 8991 . - 0 ID=cds-SNF32_08860;Parent=gene-SNF32_08860;Note=frameshifted;Ontology_term=GO:0005524,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002294013.1;locus_tag=SNF32_08860;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 9394 10016 . - . ID=gene-SNF32_08865;Name=SNF32_08865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08865;pseudo=true JAXGFV010000016.1 Protein Homology CDS 9394 10016 . - 0 ID=cds-SNF32_08865;Parent=gene-SNF32_08865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737182.1;locus_tag=SNF32_08865;product=lytic polysaccharide monooxygenase;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank gene 10259 10429 . + . ID=gene-SNF32_08870;Name=SNF32_08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08870 JAXGFV010000016.1 GeneMarkS-2+ CDS 10259 10429 . + 0 ID=cds-MDY4307385.1;Parent=gene-SNF32_08870;Dbxref=NCBI_GP:MDY4307385.1;Name=MDY4307385.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08870;product=hypothetical protein;protein_id=MDY4307385.1;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 10644 11580 . - . ID=gene-SNF32_08875;Name=SNF32_08875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08875;pseudo=true JAXGFV010000016.1 Protein Homology CDS 10644 11580 . - 0 ID=cds-SNF32_08875;Parent=gene-SNF32_08875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722921.1;locus_tag=SNF32_08875;product=transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 11789 13524 . + . ID=gene-SNF32_08880;Name=SNF32_08880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08880;pseudo=true JAXGFV010000016.1 Protein Homology CDS 11789 13524 . + 0 ID=cds-SNF32_08880;Parent=gene-SNF32_08880;Note=frameshifted;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736125.1;locus_tag=SNF32_08880;product=glycosyl hydrolase family 18 protein;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank gene 14286 15299 . + . ID=gene-SNF32_08885;Name=SNF32_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08885 JAXGFV010000016.1 Protein Homology CDS 14286 15299 . + 0 ID=cds-MDY4307386.1;Parent=gene-SNF32_08885;Dbxref=NCBI_GP:MDY4307386.1;Name=MDY4307386.1;Ontology_term=GO:0046168,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate catabolic process|0046168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722927.1;locus_tag=SNF32_08885;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=MDY4307386.1;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 15330 16209 . + . ID=gene-SNF32_08890;Name=galU;gbkey=Gene;gene=galU;gene_biotype=pseudogene;locus_tag=SNF32_08890;pseudo=true JAXGFV010000016.1 Protein Homology CDS 15330 16209 . + 0 ID=cds-SNF32_08890;Parent=gene-SNF32_08890;Note=frameshifted;Ontology_term=GO:0009225,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736123.1;locus_tag=SNF32_08890;product=UTP--glucose-1-phosphate uridylyltransferase GalU;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank gene 16273 16638 . + . ID=gene-SNF32_08895;Name=SNF32_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08895 JAXGFV010000016.1 GeneMarkS-2+ CDS 16273 16638 . + 0 ID=cds-MDY4307387.1;Parent=gene-SNF32_08895;Dbxref=NCBI_GP:MDY4307387.1;Name=MDY4307387.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08895;product=hypothetical protein;protein_id=MDY4307387.1;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 17155 17804 . + . ID=gene-SNF32_08900;Name=SNF32_08900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08900;pseudo=true JAXGFV010000016.1 Protein Homology CDS 17155 17804 . + 0 ID=cds-SNF32_08900;Parent=gene-SNF32_08900;Note=frameshifted;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002339759.1;locus_tag=SNF32_08900;product=SIS domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 18326 20015 . + . ID=gene-SNF32_08905;Name=yfcC;gbkey=Gene;gene=yfcC;gene_biotype=pseudogene;locus_tag=SNF32_08905;pseudo=true JAXGFV010000016.1 Protein Homology CDS 18326 20015 . + 0 ID=cds-SNF32_08905;Parent=gene-SNF32_08905;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;gene=yfcC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736120.1;locus_tag=SNF32_08905;product=putative basic amino acid antiporter YfcC;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 20234 21423 . + . ID=gene-SNF32_08910;Name=iadA;gbkey=Gene;gene=iadA;gene_biotype=pseudogene;locus_tag=SNF32_08910;pseudo=true JAXGFV010000016.1 Protein Homology CDS 20234 21423 . + 0 ID=cds-SNF32_08910;Parent=gene-SNF32_08910;Note=frameshifted;Ontology_term=GO:0006508,GO:0008798;gbkey=CDS;gene=iadA;go_function=beta-aspartyl-peptidase activity|0008798||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736119.1;locus_tag=SNF32_08910;product=beta-aspartyl-peptidase;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank gene 21514 21753 . + . ID=gene-SNF32_08915;Name=SNF32_08915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08915 JAXGFV010000016.1 Protein Homology CDS 21514 21753 . + 0 ID=cds-MDY4307388.1;Parent=gene-SNF32_08915;Dbxref=NCBI_GP:MDY4307388.1;Name=MDY4307388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002291027.1;locus_tag=SNF32_08915;product=CsbD family protein;protein_id=MDY4307388.1;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 21832 22454 . - . ID=gene-SNF32_08920;Name=SNF32_08920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08920;pseudo=true JAXGFV010000016.1 Protein Homology CDS 21832 22454 . - 0 ID=cds-SNF32_08920;Parent=gene-SNF32_08920;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002298949.1;locus_tag=SNF32_08920;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank gene 22467 23975 . - . ID=gene-SNF32_08925;Name=SNF32_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08925 JAXGFV010000016.1 Protein Homology CDS 22467 23975 . - 0 ID=cds-MDY4307389.1;Parent=gene-SNF32_08925;Dbxref=NCBI_GP:MDY4307389.1;Name=MDY4307389.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002338688.1;locus_tag=SNF32_08925;product=ABC transporter permease;protein_id=MDY4307389.1;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 24444 26120 . + . ID=gene-SNF32_08930;Name=SNF32_08930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08930;pseudo=true JAXGFV010000016.1 Protein Homology CDS 24444 26120 . + 0 ID=cds-SNF32_08930;Parent=gene-SNF32_08930;Note=frameshifted;Ontology_term=GO:0003723,GO:0004540,GO:0008270;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002298952.1;locus_tag=SNF32_08930;product=ribonuclease J;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank gene 26218 26604 . + . ID=gene-SNF32_08935;Name=SNF32_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08935 JAXGFV010000016.1 Protein Homology CDS 26218 26604 . + 0 ID=cds-MDY4307390.1;Parent=gene-SNF32_08935;Dbxref=NCBI_GP:MDY4307390.1;Name=MDY4307390.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014368.3;locus_tag=SNF32_08935;product=hypothetical protein;protein_id=MDY4307390.1;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 27009 27688 . + . ID=gene-SNF32_08940;Name=SNF32_08940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08940;pseudo=true JAXGFV010000016.1 Protein Homology CDS 27009 27688 . + 0 ID=cds-SNF32_08940;Parent=gene-SNF32_08940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016853428.1;locus_tag=SNF32_08940;product=metal-dependent hydrolase;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 27698 29027 . + . ID=gene-SNF32_08945;Name=SNF32_08945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08945;pseudo=true JAXGFV010000016.1 Protein Homology CDS 27698 29027 . + 0 ID=cds-SNF32_08945;Parent=gene-SNF32_08945;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002341209.1;locus_tag=SNF32_08945;product=DRTGG domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 29043 29991 . + . ID=gene-SNF32_08950;Name=SNF32_08950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08950;pseudo=true JAXGFV010000016.1 Protein Homology CDS 29043 29991 . + 0 ID=cds-SNF32_08950;Parent=gene-SNF32_08950;Note=frameshifted;Ontology_term=GO:0003676,GO:0004527,GO:0008441;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,exonuclease activity|0004527||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723186.1;locus_tag=SNF32_08950;product=bifunctional oligoribonuclease/PAP phosphatase NrnA;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank gene 30037 30198 . + . ID=gene-SNF32_08955;Name=SNF32_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08955 JAXGFV010000016.1 GeneMarkS-2+ CDS 30037 30198 . + 0 ID=cds-MDY4307391.1;Parent=gene-SNF32_08955;Dbxref=NCBI_GP:MDY4307391.1;Name=MDY4307391.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08955;product=hypothetical protein;protein_id=MDY4307391.1;transl_table=11 JAXGFV010000016.1 Genbank gene 30290 30622 . + . ID=gene-SNF32_08960;Name=SNF32_08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08960 JAXGFV010000016.1 Protein Homology CDS 30290 30622 . + 0 ID=cds-MDY4307392.1;Parent=gene-SNF32_08960;Dbxref=NCBI_GP:MDY4307392.1;Name=MDY4307392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002315786.1;locus_tag=SNF32_08960;product=zinc ribbon domain-containing protein YjdM;protein_id=MDY4307392.1;transl_table=11 JAXGFV010000016.1 Genbank gene 30700 31404 . + . ID=gene-SNF32_08965;Name=SNF32_08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08965 JAXGFV010000016.1 Protein Homology CDS 30700 31404 . + 0 ID=cds-MDY4307393.1;Parent=gene-SNF32_08965;Dbxref=NCBI_GP:MDY4307393.1;Name=MDY4307393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016853426.1;locus_tag=SNF32_08965;product=zinc metallopeptidase;protein_id=MDY4307393.1;transl_table=11 JAXGFV010000016.1 Genbank gene 31529 31699 . - . ID=gene-SNF32_08970;Name=SNF32_08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08970 JAXGFV010000016.1 GeneMarkS-2+ CDS 31529 31699 . - 0 ID=cds-MDY4307394.1;Parent=gene-SNF32_08970;Dbxref=NCBI_GP:MDY4307394.1;Name=MDY4307394.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08970;product=hypothetical protein;protein_id=MDY4307394.1;transl_table=11 JAXGFV010000016.1 Genbank gene 31696 31830 . - . ID=gene-SNF32_08975;Name=SNF32_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08975 JAXGFV010000016.1 GeneMarkS-2+ CDS 31696 31830 . - 0 ID=cds-MDY4307395.1;Parent=gene-SNF32_08975;Dbxref=NCBI_GP:MDY4307395.1;Name=MDY4307395.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08975;product=hypothetical protein;protein_id=MDY4307395.1;transl_table=11 JAXGFV010000016.1 Genbank gene 32182 32415 . - . ID=gene-SNF32_08980;Name=SNF32_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_08980 JAXGFV010000016.1 GeneMarkS-2+ CDS 32182 32415 . - 0 ID=cds-MDY4307396.1;Parent=gene-SNF32_08980;Dbxref=NCBI_GP:MDY4307396.1;Name=MDY4307396.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_08980;product=hypothetical protein;protein_id=MDY4307396.1;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 33460 34002 . + . ID=gene-SNF32_08985;Name=SNF32_08985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08985;pseudo=true JAXGFV010000016.1 Protein Homology CDS 33460 34002 . + 0 ID=cds-SNF32_08985;Parent=gene-SNF32_08985;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723190.1;locus_tag=SNF32_08985;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 34268 34601 . + . ID=gene-SNF32_08990;Name=SNF32_08990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08990;pseudo=true JAXGFV010000016.1 Protein Homology CDS 34268 34601 . + 0 ID=cds-SNF32_08990;Parent=gene-SNF32_08990;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287147.1;locus_tag=SNF32_08990;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 34671 35518 . - . ID=gene-SNF32_08995;Name=SNF32_08995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_08995;pseudo=true JAXGFV010000016.1 Protein Homology CDS 34671 35518 . - 0 ID=cds-SNF32_08995;Parent=gene-SNF32_08995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736105.1;locus_tag=SNF32_08995;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 35688 36141 . + . ID=gene-SNF32_09000;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=pseudogene;locus_tag=SNF32_09000;pseudo=true JAXGFV010000016.1 Protein Homology CDS 35688 36141 . + 0 ID=cds-SNF32_09000;Parent=gene-SNF32_09000;Note=frameshifted;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287154.1;locus_tag=SNF32_09000;product=tRNA adenosine(34) deaminase TadA;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank gene 36182 36266 . + . ID=gene-SNF32_09005;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=SNF32_09005 JAXGFV010000016.1 cmsearch SRP_RNA 36182 36266 . + . ID=rna-SNF32_09005;Parent=gene-SNF32_09005;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=SNF32_09005;product=signal recognition particle sRNA small type JAXGFV010000016.1 cmsearch exon 36182 36266 . + . ID=exon-SNF32_09005-1;Parent=rna-SNF32_09005;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=SNF32_09005;product=signal recognition particle sRNA small type JAXGFV010000016.1 Genbank pseudogene 36421 37819 . + . ID=gene-SNF32_09010;Name=SNF32_09010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09010;pseudo=true JAXGFV010000016.1 Protein Homology CDS 36421 37819 . + 0 ID=cds-SNF32_09010;Parent=gene-SNF32_09010;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736103.1;locus_tag=SNF32_09010;product=metallophosphoesterase;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 37831 38508 . + . ID=gene-SNF32_09015;Name=SNF32_09015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09015;pseudo=true JAXGFV010000016.1 Protein Homology CDS 37831 38508 . + 0 ID=cds-SNF32_09015;Parent=gene-SNF32_09015;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287156.1;locus_tag=SNF32_09015;product=YutD family protein;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank gene 38513 39277 . + . ID=gene-SNF32_09020;Name=SNF32_09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09020 JAXGFV010000016.1 Protein Homology CDS 38513 39277 . + 0 ID=cds-MDY4307397.1;Parent=gene-SNF32_09020;Dbxref=NCBI_GP:MDY4307397.1;Name=MDY4307397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002307277.1;locus_tag=SNF32_09020;product=TIGR01457 family HAD-type hydrolase;protein_id=MDY4307397.1;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 39282 39915 . + . ID=gene-SNF32_09025;Name=SNF32_09025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09025;pseudo=true JAXGFV010000016.1 Protein Homology CDS 39282 39915 . + 0 ID=cds-SNF32_09025;Parent=gene-SNF32_09025;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002339768.1;locus_tag=SNF32_09025;product=TIGR01906 family membrane protein;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 40027 40535 . - . ID=gene-SNF32_09030;Name=SNF32_09030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09030;pseudo=true JAXGFV010000016.1 Protein Homology CDS 40027 40535 . - 0 ID=cds-SNF32_09030;Parent=gene-SNF32_09030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287163.1;locus_tag=SNF32_09030;product=phosphatidylglycerophosphatase A;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 40627 41623 . - . ID=gene-SNF32_09035;Name=SNF32_09035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09035;pseudo=true JAXGFV010000016.1 Protein Homology CDS 40627 41623 . - 0 ID=cds-SNF32_09035;Parent=gene-SNF32_09035;Note=frameshifted;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724007.1;locus_tag=SNF32_09035;product=NAD(P)/FAD-dependent oxidoreductase;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank gene 41813 41962 . + . ID=gene-SNF32_09040;Name=SNF32_09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09040 JAXGFV010000016.1 GeneMarkS-2+ CDS 41813 41962 . + 0 ID=cds-MDY4307398.1;Parent=gene-SNF32_09040;Dbxref=NCBI_GP:MDY4307398.1;Name=MDY4307398.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09040;product=hypothetical protein;protein_id=MDY4307398.1;transl_table=11 JAXGFV010000016.1 Genbank gene 42158 42442 . + . ID=gene-SNF32_09045;Name=SNF32_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09045 JAXGFV010000016.1 GeneMarkS-2+ CDS 42158 42442 . + 0 ID=cds-MDY4307399.1;Parent=gene-SNF32_09045;Dbxref=NCBI_GP:MDY4307399.1;Name=MDY4307399.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09045;product=hypothetical protein;protein_id=MDY4307399.1;transl_table=11 JAXGFV010000016.1 Genbank gene 42635 42955 . + . ID=gene-SNF32_09050;Name=SNF32_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09050 JAXGFV010000016.1 GeneMarkS-2+ CDS 42635 42955 . + 0 ID=cds-MDY4307400.1;Parent=gene-SNF32_09050;Dbxref=NCBI_GP:MDY4307400.1;Name=MDY4307400.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09050;product=hypothetical protein;protein_id=MDY4307400.1;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 42968 43551 . + . ID=gene-SNF32_09055;Name=SNF32_09055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09055;pseudo=true JAXGFV010000016.1 Protein Homology CDS 42968 43551 . + 0 ID=cds-SNF32_09055;Parent=gene-SNF32_09055;Note=frameshifted;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005876718.1;locus_tag=SNF32_09055;product=peptidylprolyl isomerase;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 43696 44859 . - . ID=gene-SNF32_09060;Name=SNF32_09060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09060;pseudo=true JAXGFV010000016.1 Protein Homology CDS 43696 44859 . - 0 ID=cds-SNF32_09060;Parent=gene-SNF32_09060;Note=frameshifted;Ontology_term=GO:0009086,GO:0004121,GO:0030170;gbkey=CDS;go_function=cystathionine beta-lyase activity|0004121||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724009.1;locus_tag=SNF32_09060;product=MalY/PatB family protein;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 44949 45327 . + . ID=gene-SNF32_09065;Name=SNF32_09065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09065;pseudo=true JAXGFV010000016.1 Protein Homology CDS 44949 45327 . + 0 ID=cds-SNF32_09065;Parent=gene-SNF32_09065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002335490.1;locus_tag=SNF32_09065;product=CvfD/Ygs/GSP13 family RNA-binding post-transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000016.1 Genbank pseudogene 45398 45758 . + . ID=gene-SNF32_09070;Name=SNF32_09070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09070;pseudo=true JAXGFV010000016.1 Protein Homology CDS 45398 45758 . + 0 ID=cds-SNF32_09070;Parent=gene-SNF32_09070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014387120.1;locus_tag=SNF32_09070;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000017.1 1 43718 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000017.1 Genbank region 1 43718 . + . ID=JAXGFV010000017.1:1..43718;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000017.1 Genbank gene 380 598 . - . ID=gene-SNF32_09075;Name=SNF32_09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09075 JAXGFV010000017.1 GeneMarkS-2+ CDS 380 598 . - 0 ID=cds-MDY4307401.1;Parent=gene-SNF32_09075;Dbxref=NCBI_GP:MDY4307401.1;Name=MDY4307401.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09075;product=hypothetical protein;protein_id=MDY4307401.1;transl_table=11 JAXGFV010000017.1 Genbank gene 701 958 . - . ID=gene-SNF32_09080;Name=SNF32_09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09080 JAXGFV010000017.1 Protein Homology CDS 701 958 . - 0 ID=cds-MDY4307402.1;Parent=gene-SNF32_09080;Dbxref=NCBI_GP:MDY4307402.1;Name=MDY4307402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016249990.1;locus_tag=SNF32_09080;product=hypothetical protein;protein_id=MDY4307402.1;transl_table=11 JAXGFV010000017.1 Genbank gene 965 1114 . - . ID=gene-SNF32_09085;Name=SNF32_09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09085 JAXGFV010000017.1 GeneMarkS-2+ CDS 965 1114 . - 0 ID=cds-MDY4307403.1;Parent=gene-SNF32_09085;Dbxref=NCBI_GP:MDY4307403.1;Name=MDY4307403.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09085;product=hypothetical protein;protein_id=MDY4307403.1;transl_table=11 JAXGFV010000017.1 Genbank gene 1359 1928 . - . ID=gene-SNF32_09090;Name=SNF32_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09090 JAXGFV010000017.1 Protein Homology CDS 1359 1928 . - 0 ID=cds-MDY4307404.1;Parent=gene-SNF32_09090;Dbxref=NCBI_GP:MDY4307404.1;Name=MDY4307404.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025642.3;locus_tag=SNF32_09090;product=PcfJ domain-containing protein;protein_id=MDY4307404.1;transl_table=11 JAXGFV010000017.1 Genbank gene 1907 2227 . - . ID=gene-SNF32_09095;Name=SNF32_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09095 JAXGFV010000017.1 GeneMarkS-2+ CDS 1907 2227 . - 0 ID=cds-MDY4307405.1;Parent=gene-SNF32_09095;Dbxref=NCBI_GP:MDY4307405.1;Name=MDY4307405.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09095;product=hypothetical protein;protein_id=MDY4307405.1;transl_table=11 JAXGFV010000017.1 Genbank gene 2619 3011 . - . ID=gene-SNF32_09100;Name=SNF32_09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09100 JAXGFV010000017.1 Protein Homology CDS 2619 3011 . - 0 ID=cds-MDY4307406.1;Parent=gene-SNF32_09100;Dbxref=NCBI_GP:MDY4307406.1;Name=MDY4307406.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025424.3;locus_tag=SNF32_09100;product=Cas9 inhibitor AcrIIA9 family protein;protein_id=MDY4307406.1;transl_table=11 JAXGFV010000017.1 Genbank gene 3051 3500 . - . ID=gene-SNF32_09105;Name=SNF32_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09105 JAXGFV010000017.1 Protein Homology CDS 3051 3500 . - 0 ID=cds-MDY4307407.1;Parent=gene-SNF32_09105;Dbxref=NCBI_GP:MDY4307407.1;Name=MDY4307407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016621817.1;locus_tag=SNF32_09105;product=JAB domain-containing protein;protein_id=MDY4307407.1;transl_table=11 JAXGFV010000017.1 Genbank pseudogene 3926 4638 . - . ID=gene-SNF32_09110;Name=SNF32_09110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09110;pseudo=true JAXGFV010000017.1 Protein Homology CDS 3926 4638 . - 0 ID=cds-SNF32_09110;Parent=gene-SNF32_09110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016620981.1;locus_tag=SNF32_09110;product=DNA/RNA non-specific endonuclease;pseudo=true;transl_table=11 JAXGFV010000017.1 Genbank pseudogene 4709 5127 . - . ID=gene-SNF32_09115;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=pseudogene;locus_tag=SNF32_09115;pseudo=true JAXGFV010000017.1 Protein Homology CDS 4709 5127 . - 0 ID=cds-SNF32_09115;Parent=gene-SNF32_09115;Note=frameshifted;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010750861.1;locus_tag=SNF32_09115;product=single-stranded DNA-binding protein;pseudo=true;transl_table=11 JAXGFV010000017.1 Genbank gene 5312 5755 . - . ID=gene-SNF32_09120;Name=SNF32_09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09120 JAXGFV010000017.1 GeneMarkS-2+ CDS 5312 5755 . - 0 ID=cds-MDY4307408.1;Parent=gene-SNF32_09120;Dbxref=NCBI_GP:MDY4307408.1;Name=MDY4307408.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09120;product=hypothetical protein;protein_id=MDY4307408.1;transl_table=11 JAXGFV010000017.1 Genbank gene 6453 6599 . + . ID=gene-SNF32_09125;Name=SNF32_09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09125 JAXGFV010000017.1 GeneMarkS-2+ CDS 6453 6599 . + 0 ID=cds-MDY4307409.1;Parent=gene-SNF32_09125;Dbxref=NCBI_GP:MDY4307409.1;Name=MDY4307409.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09125;product=hypothetical protein;protein_id=MDY4307409.1;transl_table=11 JAXGFV010000017.1 Genbank gene 6660 6803 . + . ID=gene-SNF32_09130;Name=SNF32_09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09130 JAXGFV010000017.1 Protein Homology CDS 6660 6803 . + 0 ID=cds-MDY4307410.1;Parent=gene-SNF32_09130;Dbxref=NCBI_GP:MDY4307410.1;Name=MDY4307410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002387585.1;locus_tag=SNF32_09130;product=putative holin-like toxin;protein_id=MDY4307410.1;transl_table=11 JAXGFV010000017.1 Genbank gene 7170 7361 . - . ID=gene-SNF32_09135;Name=SNF32_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09135 JAXGFV010000017.1 Protein Homology CDS 7170 7361 . - 0 ID=cds-MDY4307411.1;Parent=gene-SNF32_09135;Dbxref=NCBI_GP:MDY4307411.1;Name=MDY4307411.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF013540.3;locus_tag=SNF32_09135;product=helix-turn-helix transcriptional regulator;protein_id=MDY4307411.1;transl_table=11 JAXGFV010000017.1 Genbank gene 7824 8930 . - . ID=gene-SNF32_09140;Name=SNF32_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09140 JAXGFV010000017.1 Protein Homology CDS 7824 8930 . - 0 ID=cds-MDY4307412.1;Parent=gene-SNF32_09140;Dbxref=NCBI_GP:MDY4307412.1;Name=MDY4307412.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014581.3;locus_tag=SNF32_09140;product=TraM recognition domain-containing protein;protein_id=MDY4307412.1;transl_table=11 JAXGFV010000017.1 Genbank gene 8927 9334 . - . ID=gene-SNF32_09145;Name=SNF32_09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09145 JAXGFV010000017.1 GeneMarkS-2+ CDS 8927 9334 . - 0 ID=cds-MDY4307413.1;Parent=gene-SNF32_09145;Dbxref=NCBI_GP:MDY4307413.1;Name=MDY4307413.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09145;product=hypothetical protein;protein_id=MDY4307413.1;transl_table=11 JAXGFV010000017.1 Genbank gene 9397 9555 . - . ID=gene-SNF32_09150;Name=SNF32_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09150 JAXGFV010000017.1 GeneMarkS-2+ CDS 9397 9555 . - 0 ID=cds-MDY4307414.1;Parent=gene-SNF32_09150;Dbxref=NCBI_GP:MDY4307414.1;Name=MDY4307414.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09150;product=hypothetical protein;protein_id=MDY4307414.1;transl_table=11 JAXGFV010000017.1 Genbank gene 9576 9947 . - . ID=gene-SNF32_09155;Name=SNF32_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09155 JAXGFV010000017.1 GeneMarkS-2+ CDS 9576 9947 . - 0 ID=cds-MDY4307415.1;Parent=gene-SNF32_09155;Dbxref=NCBI_GP:MDY4307415.1;Name=MDY4307415.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09155;product=hypothetical protein;protein_id=MDY4307415.1;transl_table=11 JAXGFV010000017.1 Genbank gene 9931 10365 . - . ID=gene-SNF32_09160;Name=SNF32_09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09160 JAXGFV010000017.1 GeneMarkS-2+ CDS 9931 10365 . - 0 ID=cds-MDY4307416.1;Parent=gene-SNF32_09160;Dbxref=NCBI_GP:MDY4307416.1;Name=MDY4307416.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09160;product=hypothetical protein;protein_id=MDY4307416.1;transl_table=11 JAXGFV010000017.1 Genbank gene 11407 11844 . - . ID=gene-SNF32_09165;Name=SNF32_09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09165 JAXGFV010000017.1 GeneMarkS-2+ CDS 11407 11844 . - 0 ID=cds-MDY4307417.1;Parent=gene-SNF32_09165;Dbxref=NCBI_GP:MDY4307417.1;Name=MDY4307417.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09165;product=hypothetical protein;protein_id=MDY4307417.1;transl_table=11 JAXGFV010000017.1 Genbank gene 11995 12198 . - . ID=gene-SNF32_09170;Name=SNF32_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09170 JAXGFV010000017.1 GeneMarkS-2+ CDS 11995 12198 . - 0 ID=cds-MDY4307418.1;Parent=gene-SNF32_09170;Dbxref=NCBI_GP:MDY4307418.1;Name=MDY4307418.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09170;product=hypothetical protein;protein_id=MDY4307418.1;transl_table=11 JAXGFV010000017.1 Genbank gene 12271 12882 . - . ID=gene-SNF32_09175;Name=SNF32_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09175 JAXGFV010000017.1 GeneMarkS-2+ CDS 12271 12882 . - 0 ID=cds-MDY4307419.1;Parent=gene-SNF32_09175;Dbxref=NCBI_GP:MDY4307419.1;Name=MDY4307419.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09175;product=hypothetical protein;protein_id=MDY4307419.1;transl_table=11 JAXGFV010000017.1 Genbank gene 12895 13461 . - . ID=gene-SNF32_09180;Name=SNF32_09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09180 JAXGFV010000017.1 Protein Homology CDS 12895 13461 . - 0 ID=cds-MDY4307420.1;Parent=gene-SNF32_09180;Dbxref=NCBI_GP:MDY4307420.1;Name=MDY4307420.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013700.3;locus_tag=SNF32_09180;product=M23 family metallopeptidase;protein_id=MDY4307420.1;transl_table=11 JAXGFV010000017.1 Genbank gene 13482 13901 . - . ID=gene-SNF32_09185;Name=SNF32_09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09185 JAXGFV010000017.1 Protein Homology CDS 13482 13901 . - 0 ID=cds-MDY4307421.1;Parent=gene-SNF32_09185;Dbxref=NCBI_GP:MDY4307421.1;Name=MDY4307421.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025081.3;locus_tag=SNF32_09185;product=lysozyme family protein;protein_id=MDY4307421.1;transl_table=11 JAXGFV010000017.1 Genbank gene 14131 14277 . - . ID=gene-SNF32_09190;Name=SNF32_09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09190 JAXGFV010000017.1 GeneMarkS-2+ CDS 14131 14277 . - 0 ID=cds-MDY4307422.1;Parent=gene-SNF32_09190;Dbxref=NCBI_GP:MDY4307422.1;Name=MDY4307422.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09190;product=hypothetical protein;protein_id=MDY4307422.1;transl_table=11 JAXGFV010000017.1 Genbank gene 14281 14430 . - . ID=gene-SNF32_09195;Name=SNF32_09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09195 JAXGFV010000017.1 GeneMarkS-2+ CDS 14281 14430 . - 0 ID=cds-MDY4307423.1;Parent=gene-SNF32_09195;Dbxref=NCBI_GP:MDY4307423.1;Name=MDY4307423.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09195;product=hypothetical protein;protein_id=MDY4307423.1;transl_table=11 JAXGFV010000017.1 Genbank gene 14415 14780 . - . ID=gene-SNF32_09200;Name=SNF32_09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09200 JAXGFV010000017.1 GeneMarkS-2+ CDS 14415 14780 . - 0 ID=cds-MDY4307424.1;Parent=gene-SNF32_09200;Dbxref=NCBI_GP:MDY4307424.1;Name=MDY4307424.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09200;product=hypothetical protein;protein_id=MDY4307424.1;transl_table=11 JAXGFV010000017.1 Genbank gene 14777 15298 . - . ID=gene-SNF32_09205;Name=SNF32_09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09205 JAXGFV010000017.1 GeneMarkS-2+ CDS 14777 15298 . - 0 ID=cds-MDY4307425.1;Parent=gene-SNF32_09205;Dbxref=NCBI_GP:MDY4307425.1;Name=MDY4307425.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09205;product=hypothetical protein;protein_id=MDY4307425.1;transl_table=11 JAXGFV010000017.1 Genbank gene 15292 16020 . - . ID=gene-SNF32_09210;Name=SNF32_09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09210 JAXGFV010000017.1 GeneMarkS-2+ CDS 15292 16020 . - 0 ID=cds-MDY4307426.1;Parent=gene-SNF32_09210;Dbxref=NCBI_GP:MDY4307426.1;Name=MDY4307426.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09210;product=hypothetical protein;protein_id=MDY4307426.1;transl_table=11 JAXGFV010000017.1 Genbank gene 16230 16781 . - . ID=gene-SNF32_09215;Name=SNF32_09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09215 JAXGFV010000017.1 GeneMarkS-2+ CDS 16230 16781 . - 0 ID=cds-MDY4307427.1;Parent=gene-SNF32_09215;Dbxref=NCBI_GP:MDY4307427.1;Name=MDY4307427.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09215;product=hypothetical protein;protein_id=MDY4307427.1;transl_table=11 JAXGFV010000017.1 Genbank gene 17085 17600 . - . ID=gene-SNF32_09220;Name=SNF32_09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09220 JAXGFV010000017.1 GeneMarkS-2+ CDS 17085 17600 . - 0 ID=cds-MDY4307428.1;Parent=gene-SNF32_09220;Dbxref=NCBI_GP:MDY4307428.1;Name=MDY4307428.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09220;product=hypothetical protein;protein_id=MDY4307428.1;transl_table=11 JAXGFV010000017.1 Genbank gene 17597 17761 . - . ID=gene-SNF32_09225;Name=SNF32_09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09225 JAXGFV010000017.1 GeneMarkS-2+ CDS 17597 17761 . - 0 ID=cds-MDY4307429.1;Parent=gene-SNF32_09225;Dbxref=NCBI_GP:MDY4307429.1;Name=MDY4307429.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09225;product=hypothetical protein;protein_id=MDY4307429.1;transl_table=11 JAXGFV010000017.1 Genbank gene 17863 19191 . - . ID=gene-SNF32_09230;Name=SNF32_09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09230 JAXGFV010000017.1 GeneMarkS-2+ CDS 17863 19191 . - 0 ID=cds-MDY4307430.1;Parent=gene-SNF32_09230;Dbxref=NCBI_GP:MDY4307430.1;Name=MDY4307430.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09230;product=hypothetical protein;protein_id=MDY4307430.1;transl_table=11 JAXGFV010000017.1 Genbank gene 19453 19650 . - . ID=gene-SNF32_09235;Name=SNF32_09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09235 JAXGFV010000017.1 GeneMarkS-2+ CDS 19453 19650 . - 0 ID=cds-MDY4307431.1;Parent=gene-SNF32_09235;Dbxref=NCBI_GP:MDY4307431.1;Name=MDY4307431.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09235;product=hypothetical protein;protein_id=MDY4307431.1;transl_table=11 JAXGFV010000017.1 Genbank gene 19665 19841 . - . ID=gene-SNF32_09240;Name=SNF32_09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09240 JAXGFV010000017.1 GeneMarkS-2+ CDS 19665 19841 . - 0 ID=cds-MDY4307432.1;Parent=gene-SNF32_09240;Dbxref=NCBI_GP:MDY4307432.1;Name=MDY4307432.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09240;product=hypothetical protein;protein_id=MDY4307432.1;transl_table=11 JAXGFV010000017.1 Genbank gene 19952 20368 . - . ID=gene-SNF32_09245;Name=SNF32_09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09245 JAXGFV010000017.1 GeneMarkS-2+ CDS 19952 20368 . - 0 ID=cds-MDY4307433.1;Parent=gene-SNF32_09245;Dbxref=NCBI_GP:MDY4307433.1;Name=MDY4307433.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09245;product=hypothetical protein;protein_id=MDY4307433.1;transl_table=11 JAXGFV010000017.1 Genbank gene 20468 20620 . - . ID=gene-SNF32_09250;Name=SNF32_09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09250 JAXGFV010000017.1 GeneMarkS-2+ CDS 20468 20620 . - 0 ID=cds-MDY4307434.1;Parent=gene-SNF32_09250;Dbxref=NCBI_GP:MDY4307434.1;Name=MDY4307434.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09250;product=hypothetical protein;protein_id=MDY4307434.1;transl_table=11 JAXGFV010000017.1 Genbank gene 20677 21627 . - . ID=gene-SNF32_09255;Name=SNF32_09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09255 JAXGFV010000017.1 GeneMarkS-2+ CDS 20677 21627 . - 0 ID=cds-MDY4307435.1;Parent=gene-SNF32_09255;Dbxref=NCBI_GP:MDY4307435.1;Name=MDY4307435.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09255;product=hypothetical protein;protein_id=MDY4307435.1;transl_table=11 JAXGFV010000017.1 Genbank gene 21762 21977 . - . ID=gene-SNF32_09260;Name=SNF32_09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09260 JAXGFV010000017.1 GeneMarkS-2+ CDS 21762 21977 . - 0 ID=cds-MDY4307436.1;Parent=gene-SNF32_09260;Dbxref=NCBI_GP:MDY4307436.1;Name=MDY4307436.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09260;product=hypothetical protein;protein_id=MDY4307436.1;transl_table=11 JAXGFV010000017.1 Genbank gene 22312 22818 . - . ID=gene-SNF32_09265;Name=SNF32_09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09265 JAXGFV010000017.1 Protein Homology CDS 22312 22818 . - 0 ID=cds-MDY4307437.1;Parent=gene-SNF32_09265;Dbxref=NCBI_GP:MDY4307437.1;Name=MDY4307437.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01076.1;locus_tag=SNF32_09265;product=class A sortase;protein_id=MDY4307437.1;transl_table=11 JAXGFV010000017.1 Genbank gene 23065 24906 . - . ID=gene-SNF32_09270;Name=SNF32_09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09270 JAXGFV010000017.1 Protein Homology CDS 23065 24906 . - 0 ID=cds-MDY4307438.1;Parent=gene-SNF32_09270;Dbxref=NCBI_GP:MDY4307438.1;Name=MDY4307438.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037639.3;locus_tag=SNF32_09270;product=prealbumin-like fold domain-containing protein;protein_id=MDY4307438.1;transl_table=11 JAXGFV010000017.1 Genbank gene 24936 25415 . - . ID=gene-SNF32_09275;Name=SNF32_09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09275 JAXGFV010000017.1 Protein Homology CDS 24936 25415 . - 0 ID=cds-MDY4307439.1;Parent=gene-SNF32_09275;Dbxref=NCBI_GP:MDY4307439.1;Name=MDY4307439.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037639.3;locus_tag=SNF32_09275;product=SpaA isopeptide-forming pilin-related protein;protein_id=MDY4307439.1;transl_table=11 JAXGFV010000017.1 Genbank gene 25391 26857 . - . ID=gene-SNF32_09280;Name=SNF32_09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09280 JAXGFV010000017.1 Protein Homology CDS 25391 26857 . - 0 ID=cds-MDY4307440.1;Parent=gene-SNF32_09280;Dbxref=NCBI_GP:MDY4307440.1;Name=MDY4307440.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037639.3;locus_tag=SNF32_09280;product=SpaA isopeptide-forming pilin-related protein;protein_id=MDY4307440.1;transl_table=11 JAXGFV010000017.1 Genbank gene 26971 27168 . - . ID=gene-SNF32_09285;Name=SNF32_09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09285 JAXGFV010000017.1 GeneMarkS-2+ CDS 26971 27168 . - 0 ID=cds-MDY4307441.1;Parent=gene-SNF32_09285;Dbxref=NCBI_GP:MDY4307441.1;Name=MDY4307441.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09285;product=hypothetical protein;protein_id=MDY4307441.1;transl_table=11 JAXGFV010000017.1 Genbank gene 27228 27437 . - . ID=gene-SNF32_09290;Name=SNF32_09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09290 JAXGFV010000017.1 GeneMarkS-2+ CDS 27228 27437 . - 0 ID=cds-MDY4307442.1;Parent=gene-SNF32_09290;Dbxref=NCBI_GP:MDY4307442.1;Name=MDY4307442.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09290;product=hypothetical protein;protein_id=MDY4307442.1;transl_table=11 JAXGFV010000017.1 Genbank gene 27559 28257 . - . ID=gene-SNF32_09295;Name=SNF32_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09295 JAXGFV010000017.1 Protein Homology CDS 27559 28257 . - 0 ID=cds-MDY4307443.1;Parent=gene-SNF32_09295;Dbxref=NCBI_GP:MDY4307443.1;Name=MDY4307443.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013630.3;locus_tag=SNF32_09295;product=LysM peptidoglycan-binding domain-containing protein;protein_id=MDY4307443.1;transl_table=11 JAXGFV010000017.1 Genbank gene 28281 28454 . - . ID=gene-SNF32_09300;Name=SNF32_09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09300 JAXGFV010000017.1 GeneMarkS-2+ CDS 28281 28454 . - 0 ID=cds-MDY4307444.1;Parent=gene-SNF32_09300;Dbxref=NCBI_GP:MDY4307444.1;Name=MDY4307444.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09300;product=hypothetical protein;protein_id=MDY4307444.1;transl_table=11 JAXGFV010000017.1 Genbank gene 29029 29247 . + . ID=gene-SNF32_09305;Name=SNF32_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09305 JAXGFV010000017.1 GeneMarkS-2+ CDS 29029 29247 . + 0 ID=cds-MDY4307445.1;Parent=gene-SNF32_09305;Dbxref=NCBI_GP:MDY4307445.1;Name=MDY4307445.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09305;product=hypothetical protein;protein_id=MDY4307445.1;transl_table=11 JAXGFV010000017.1 Genbank gene 29681 30118 . - . ID=gene-SNF32_09310;Name=SNF32_09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09310 JAXGFV010000017.1 GeneMarkS-2+ CDS 29681 30118 . - 0 ID=cds-MDY4307446.1;Parent=gene-SNF32_09310;Dbxref=NCBI_GP:MDY4307446.1;Name=MDY4307446.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09310;product=hypothetical protein;protein_id=MDY4307446.1;transl_table=11 JAXGFV010000017.1 Genbank gene 30639 30896 . - . ID=gene-SNF32_09315;Name=SNF32_09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09315 JAXGFV010000017.1 GeneMarkS-2+ CDS 30639 30896 . - 0 ID=cds-MDY4307447.1;Parent=gene-SNF32_09315;Dbxref=NCBI_GP:MDY4307447.1;Name=MDY4307447.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09315;product=hypothetical protein;protein_id=MDY4307447.1;transl_table=11 JAXGFV010000017.1 Genbank gene 31970 32437 . + . ID=gene-SNF32_09320;Name=SNF32_09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09320 JAXGFV010000017.1 Protein Homology CDS 31970 32437 . + 0 ID=cds-MDY4307448.1;Parent=gene-SNF32_09320;Dbxref=NCBI_GP:MDY4307448.1;Name=MDY4307448.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF013540.3;locus_tag=SNF32_09320;product=helix-turn-helix transcriptional regulator;protein_id=MDY4307448.1;transl_table=11 JAXGFV010000017.1 Genbank pseudogene 32968 34010 . - . ID=gene-SNF32_09325;Name=SNF32_09325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09325;pseudo=true JAXGFV010000017.1 Protein Homology CDS 32968 34010 . - 0 ID=cds-SNF32_09325;Parent=gene-SNF32_09325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734347.1;locus_tag=SNF32_09325;product=replication initiator protein A;pseudo=true;transl_table=11 JAXGFV010000017.1 Genbank pseudogene 34329 34732 . - . ID=gene-SNF32_09330;Name=SNF32_09330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09330;pseudo=true JAXGFV010000017.1 Protein Homology CDS 34329 34732 . - 0 ID=cds-SNF32_09330;Parent=gene-SNF32_09330;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002305214.1;locus_tag=SNF32_09330;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000017.1 Genbank pseudogene 34750 35567 . - . ID=gene-SNF32_09335;Name=SNF32_09335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09335;pseudo=true JAXGFV010000017.1 Protein Homology CDS 34750 35567 . - 0 ID=cds-SNF32_09335;Parent=gene-SNF32_09335;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002305212.1;locus_tag=SNF32_09335;product=ParA family protein;pseudo=true;transl_table=11 JAXGFV010000017.1 Genbank pseudogene 35782 36074 . - . ID=gene-SNF32_09340;Name=SNF32_09340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09340;pseudo=true JAXGFV010000017.1 Protein Homology CDS 35782 36074 . - 0 ID=cds-SNF32_09340;Parent=gene-SNF32_09340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002352765.1;locus_tag=SNF32_09340;product=type III secretion system protein PrgN;pseudo=true;transl_table=11 JAXGFV010000017.1 Genbank gene 36220 36348 . - . ID=gene-SNF32_09345;Name=SNF32_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09345 JAXGFV010000017.1 GeneMarkS-2+ CDS 36220 36348 . - 0 ID=cds-MDY4307449.1;Parent=gene-SNF32_09345;Dbxref=NCBI_GP:MDY4307449.1;Name=MDY4307449.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09345;product=hypothetical protein;protein_id=MDY4307449.1;transl_table=11 JAXGFV010000017.1 Genbank gene 36362 36760 . - . ID=gene-SNF32_09350;Name=SNF32_09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09350 JAXGFV010000017.1 GeneMarkS-2+ CDS 36362 36760 . - 0 ID=cds-MDY4307450.1;Parent=gene-SNF32_09350;Dbxref=NCBI_GP:MDY4307450.1;Name=MDY4307450.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09350;product=hypothetical protein;protein_id=MDY4307450.1;transl_table=11 JAXGFV010000017.1 Genbank gene 36810 37037 . - . ID=gene-SNF32_09355;Name=SNF32_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09355 JAXGFV010000017.1 GeneMarkS-2+ CDS 36810 37037 . - 0 ID=cds-MDY4307451.1;Parent=gene-SNF32_09355;Dbxref=NCBI_GP:MDY4307451.1;Name=MDY4307451.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09355;product=hypothetical protein;protein_id=MDY4307451.1;transl_table=11 JAXGFV010000017.1 Genbank gene 37284 37466 . - . ID=gene-SNF32_09360;Name=SNF32_09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09360 JAXGFV010000017.1 Protein Homology CDS 37284 37466 . - 0 ID=cds-MDY4307452.1;Parent=gene-SNF32_09360;Dbxref=NCBI_GP:MDY4307452.1;Name=MDY4307452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002320829.1;locus_tag=SNF32_09360;product=hypothetical protein;protein_id=MDY4307452.1;transl_table=11 JAXGFV010000017.1 Genbank gene 37463 37810 . - . ID=gene-SNF32_09365;Name=SNF32_09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09365 JAXGFV010000017.1 Protein Homology CDS 37463 37810 . - 0 ID=cds-MDY4307453.1;Parent=gene-SNF32_09365;Dbxref=NCBI_GP:MDY4307453.1;Name=MDY4307453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010738595.1;locus_tag=SNF32_09365;product=hypothetical protein;protein_id=MDY4307453.1;transl_table=11 JAXGFV010000017.1 Genbank pseudogene 37803 38463 . - . ID=gene-SNF32_09370;Name=SNF32_09370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09370;pseudo=true JAXGFV010000017.1 Protein Homology CDS 37803 38463 . - 0 ID=cds-SNF32_09370;Parent=gene-SNF32_09370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002335330.1;locus_tag=SNF32_09370;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000017.1 Genbank gene 38544 38774 . - . ID=gene-SNF32_09375;Name=SNF32_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09375 JAXGFV010000017.1 Protein Homology CDS 38544 38774 . - 0 ID=cds-MDY4307454.1;Parent=gene-SNF32_09375;Dbxref=NCBI_GP:MDY4307454.1;Name=MDY4307454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002300097.1;locus_tag=SNF32_09375;product=DNA helicase UvrA;protein_id=MDY4307454.1;transl_table=11 JAXGFV010000017.1 Genbank gene 39082 39468 . - . ID=gene-SNF32_09380;Name=SNF32_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09380 JAXGFV010000017.1 GeneMarkS-2+ CDS 39082 39468 . - 0 ID=cds-MDY4307455.1;Parent=gene-SNF32_09380;Dbxref=NCBI_GP:MDY4307455.1;Name=MDY4307455.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09380;product=hypothetical protein;protein_id=MDY4307455.1;transl_table=11 JAXGFV010000017.1 Genbank gene 39593 40081 . - . ID=gene-SNF32_09385;Name=SNF32_09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09385 JAXGFV010000017.1 GeneMarkS-2+ CDS 39593 40081 . - 0 ID=cds-MDY4307456.1;Parent=gene-SNF32_09385;Dbxref=NCBI_GP:MDY4307456.1;Name=MDY4307456.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09385;product=hypothetical protein;protein_id=MDY4307456.1;transl_table=11 JAXGFV010000017.1 Genbank gene 40660 40917 . + . ID=gene-SNF32_09390;Name=SNF32_09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09390 JAXGFV010000017.1 GeneMarkS-2+ CDS 40660 40917 . + 0 ID=cds-MDY4307457.1;Parent=gene-SNF32_09390;Dbxref=NCBI_GP:MDY4307457.1;Name=MDY4307457.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09390;product=hypothetical protein;protein_id=MDY4307457.1;transl_table=11 JAXGFV010000017.1 Genbank gene 42241 42492 . - . ID=gene-SNF32_09395;Name=SNF32_09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09395 JAXGFV010000017.1 Protein Homology CDS 42241 42492 . - 0 ID=cds-MDY4307458.1;Parent=gene-SNF32_09395;Dbxref=NCBI_GP:MDY4307458.1;Name=MDY4307458.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025612.3;locus_tag=SNF32_09395;product=hypothetical protein;protein_id=MDY4307458.1;transl_table=11 JAXGFV010000017.1 Genbank gene 42471 42962 . - . ID=gene-SNF32_09400;Name=SNF32_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09400 JAXGFV010000017.1 Protein Homology CDS 42471 42962 . - 0 ID=cds-MDY4307459.1;Parent=gene-SNF32_09400;Dbxref=NCBI_GP:MDY4307459.1;Name=MDY4307459.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025612.3;locus_tag=SNF32_09400;product=AbiH family protein;protein_id=MDY4307459.1;transl_table=11 JAXGFV010000017.1 Genbank pseudogene 42995 43608 . - . ID=gene-SNF32_09405;Name=SNF32_09405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09405;pseudo=true JAXGFV010000017.1 Protein Homology CDS 42995 43608 . - 0 ID=cds-SNF32_09405;Parent=gene-SNF32_09405;Note=frameshifted;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002399484.1;locus_tag=SNF32_09405;product=recombinase family protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000018.1 1 42557 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000018.1 Genbank region 1 42557 . + . ID=JAXGFV010000018.1:1..42557;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000018.1 Genbank pseudogene 79 2109 . - . ID=gene-SNF32_09410;Name=copB;gbkey=Gene;gene=copB;gene_biotype=pseudogene;locus_tag=SNF32_09410;pseudo=true JAXGFV010000018.1 Protein Homology CDS 79 2109 . - 0 ID=cds-SNF32_09410;Parent=gene-SNF32_09410;Note=frameshifted;gbkey=CDS;gene=copB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734991.1;locus_tag=SNF32_09410;product=copper/silver-translocating P-type ATPase CopB;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 2266 4440 . - . ID=gene-SNF32_09415;Name=SNF32_09415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09415;pseudo=true JAXGFV010000018.1 Protein Homology CDS 2266 4440 . - 0 ID=cds-SNF32_09415;Parent=gene-SNF32_09415;Note=frameshifted;Ontology_term=GO:0006812,GO:0005524,GO:0019829,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734990.1;locus_tag=SNF32_09415;product=heavy metal translocating P-type ATPase;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 4441 4648 . - . ID=gene-SNF32_09420;Name=copZ;gbkey=Gene;gene=copZ;gene_biotype=pseudogene;locus_tag=SNF32_09420;pseudo=true JAXGFV010000018.1 Protein Homology CDS 4441 4648 . - 0 ID=cds-SNF32_09420;Parent=gene-SNF32_09420;Note=frameshifted;Ontology_term=GO:0005507,GO:0046872;gbkey=CDS;gene=copZ;go_function=copper ion binding|0005507||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002376514.1;locus_tag=SNF32_09420;product=copper chaperone CopZ;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank gene 4662 5102 . - . ID=gene-SNF32_09425;Name=SNF32_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09425 JAXGFV010000018.1 Protein Homology CDS 4662 5102 . - 0 ID=cds-MDY4307460.1;Parent=gene-SNF32_09425;Dbxref=NCBI_GP:MDY4307460.1;Name=MDY4307460.1;Ontology_term=GO:0006355,GO:0006825;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA,copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734988.1;locus_tag=SNF32_09425;product=CopY/TcrY family copper transport repressor;protein_id=MDY4307460.1;transl_table=11 JAXGFV010000018.1 Genbank gene 5242 5709 . - . ID=gene-SNF32_09430;Name=SNF32_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09430 JAXGFV010000018.1 GeneMarkS-2+ CDS 5242 5709 . - 0 ID=cds-MDY4307461.1;Parent=gene-SNF32_09430;Dbxref=NCBI_GP:MDY4307461.1;Name=MDY4307461.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09430;product=topology modulation protein;protein_id=MDY4307461.1;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 5836 7274 . - . ID=gene-SNF32_09435;Name=SNF32_09435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09435;pseudo=true JAXGFV010000018.1 Protein Homology CDS 5836 7274 . - 0 ID=cds-SNF32_09435;Parent=gene-SNF32_09435;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016628959.1;locus_tag=SNF32_09435;product=amino acid permease;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 7528 9646 . - . ID=gene-SNF32_09440;Name=SNF32_09440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09440;pseudo=true JAXGFV010000018.1 Protein Homology CDS 7528 9646 . - 0 ID=cds-SNF32_09440;Parent=gene-SNF32_09440;Note=frameshifted;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002301949.1;locus_tag=SNF32_09440;product=heavy metal translocating P-type ATPase;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank gene 9854 10033 . + . ID=gene-SNF32_09445;Name=SNF32_09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09445 JAXGFV010000018.1 GeneMarkS-2+ CDS 9854 10033 . + 0 ID=cds-MDY4307462.1;Parent=gene-SNF32_09445;Dbxref=NCBI_GP:MDY4307462.1;Name=MDY4307462.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09445;product=hypothetical protein;protein_id=MDY4307462.1;transl_table=11 JAXGFV010000018.1 Genbank gene 10416 10868 . + . ID=gene-SNF32_09450;Name=SNF32_09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09450 JAXGFV010000018.1 GeneMarkS-2+ CDS 10416 10868 . + 0 ID=cds-MDY4307463.1;Parent=gene-SNF32_09450;Dbxref=NCBI_GP:MDY4307463.1;Name=MDY4307463.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09450;product=hypothetical protein;protein_id=MDY4307463.1;transl_table=11 JAXGFV010000018.1 Genbank gene 11133 11318 . + . ID=gene-SNF32_09455;Name=SNF32_09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09455 JAXGFV010000018.1 GeneMarkS-2+ CDS 11133 11318 . + 0 ID=cds-MDY4307464.1;Parent=gene-SNF32_09455;Dbxref=NCBI_GP:MDY4307464.1;Name=MDY4307464.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09455;product=hypothetical protein;protein_id=MDY4307464.1;transl_table=11 JAXGFV010000018.1 Genbank gene 11438 11956 . + . ID=gene-SNF32_09460;Name=SNF32_09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09460 JAXGFV010000018.1 GeneMarkS-2+ CDS 11438 11956 . + 0 ID=cds-MDY4307465.1;Parent=gene-SNF32_09460;Dbxref=NCBI_GP:MDY4307465.1;Name=MDY4307465.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09460;product=hypothetical protein;protein_id=MDY4307465.1;transl_table=11 JAXGFV010000018.1 Genbank gene 12110 12286 . + . ID=gene-SNF32_09465;Name=SNF32_09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09465 JAXGFV010000018.1 GeneMarkS-2+ CDS 12110 12286 . + 0 ID=cds-MDY4307466.1;Parent=gene-SNF32_09465;Dbxref=NCBI_GP:MDY4307466.1;Name=MDY4307466.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09465;product=hypothetical protein;protein_id=MDY4307466.1;transl_table=11 JAXGFV010000018.1 Genbank gene 12487 12846 . - . ID=gene-SNF32_09470;Name=SNF32_09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09470 JAXGFV010000018.1 Protein Homology CDS 12487 12846 . - 0 ID=cds-MDY4307467.1;Parent=gene-SNF32_09470;Dbxref=NCBI_GP:MDY4307467.1;Name=MDY4307467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629779.1;locus_tag=SNF32_09470;product=YccF domain-containing protein;protein_id=MDY4307467.1;transl_table=11 JAXGFV010000018.1 Genbank gene 12843 12983 . - . ID=gene-SNF32_09475;Name=SNF32_09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09475 JAXGFV010000018.1 GeneMarkS-2+ CDS 12843 12983 . - 0 ID=cds-MDY4307468.1;Parent=gene-SNF32_09475;Dbxref=NCBI_GP:MDY4307468.1;Name=MDY4307468.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09475;product=hypothetical protein;protein_id=MDY4307468.1;transl_table=11 JAXGFV010000018.1 Genbank gene 12956 13186 . - . ID=gene-SNF32_09480;Name=SNF32_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09480 JAXGFV010000018.1 GeneMarkS-2+ CDS 12956 13186 . - 0 ID=cds-MDY4307469.1;Parent=gene-SNF32_09480;Dbxref=NCBI_GP:MDY4307469.1;Name=MDY4307469.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09480;product=hypothetical protein;protein_id=MDY4307469.1;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 13176 13852 . - . ID=gene-SNF32_09485;Name=SNF32_09485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09485;pseudo=true JAXGFV010000018.1 Protein Homology CDS 13176 13852 . - 0 ID=cds-SNF32_09485;Parent=gene-SNF32_09485;Note=frameshifted;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734980.1;locus_tag=SNF32_09485;product=SGNH/GDSL hydrolase family protein;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 14012 15308 . - . ID=gene-SNF32_09490;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=pseudogene;locus_tag=SNF32_09490;pseudo=true JAXGFV010000018.1 Protein Homology CDS 14012 15308 . - 0 ID=cds-SNF32_09490;Parent=gene-SNF32_09490;Note=frameshifted;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016180901.1;locus_tag=SNF32_09490;product=asparagine--tRNA ligase;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 15339 16531 . - . ID=gene-SNF32_09495;Name=SNF32_09495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09495;pseudo=true JAXGFV010000018.1 Protein Homology CDS 15339 16531 . - 0 ID=cds-SNF32_09495;Parent=gene-SNF32_09495;Note=frameshifted;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734978.1;locus_tag=SNF32_09495;product=pyridoxal phosphate-dependent aminotransferase;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 16558 17084 . - . ID=gene-SNF32_09500;Name=SNF32_09500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09500;pseudo=true JAXGFV010000018.1 Protein Homology CDS 16558 17084 . - 0 ID=cds-SNF32_09500;Parent=gene-SNF32_09500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002316397.1;locus_tag=SNF32_09500;product=DUF5590 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 17128 19912 . - . ID=gene-SNF32_09505;Name=SNF32_09505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09505;pseudo=true JAXGFV010000018.1 Protein Homology CDS 17128 19912 . - 0 ID=cds-SNF32_09505;Parent=gene-SNF32_09505;Note=frameshifted;Ontology_term=GO:0006139,GO:0003676,GO:0004386,GO:0005524,GO:0016818;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723084.1;locus_tag=SNF32_09505;product=helicase C-terminal domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank gene 20194 20394 . - . ID=gene-SNF32_09510;Name=SNF32_09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09510 JAXGFV010000018.1 Protein Homology CDS 20194 20394 . - 0 ID=cds-MDY4307470.1;Parent=gene-SNF32_09510;Dbxref=NCBI_GP:MDY4307470.1;Name=MDY4307470.1;Ontology_term=GO:0001072,GO:0003676,GO:0003723,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,nucleic acid binding|0003676||IEA,RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016625467.1;locus_tag=SNF32_09510;product=cold-shock protein;protein_id=MDY4307470.1;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 20768 21871 . - . ID=gene-SNF32_09515;Name=SNF32_09515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09515;pseudo=true JAXGFV010000018.1 Protein Homology CDS 20768 21871 . - 0 ID=cds-SNF32_09515;Parent=gene-SNF32_09515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016631402.1;locus_tag=SNF32_09515;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 22374 23648 . + . ID=gene-SNF32_09520;Name=SNF32_09520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09520;pseudo=true JAXGFV010000018.1 Protein Homology CDS 22374 23648 . + 0 ID=cds-SNF32_09520;Parent=gene-SNF32_09520;Note=frameshifted;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002302201.1;locus_tag=SNF32_09520;product=serine hydrolase;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 23984 25181 . + . ID=gene-SNF32_09525;Name=SNF32_09525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09525;pseudo=true JAXGFV010000018.1 Protein Homology CDS 23984 25181 . + 0 ID=cds-SNF32_09525;Parent=gene-SNF32_09525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734972.1;locus_tag=SNF32_09525;product=ElyC/SanA/YdcF family protein;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 25248 26483 . - . ID=gene-SNF32_09530;Name=SNF32_09530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09530;pseudo=true JAXGFV010000018.1 Protein Homology CDS 25248 26483 . - 0 ID=cds-SNF32_09530;Parent=gene-SNF32_09530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002302198.1;locus_tag=SNF32_09530;product=voltage-gated chloride channel family protein;pseudo=true;transl_table=11 JAXGFV010000018.1 cmsearch riboswitch 26532 26599 . - . ID=id-JAXGFV010000018.1:26532..26599;Dbxref=RFAM:RF01734;Note=Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride%3B They are found in a wide variety of bacteria and archaea;bound_moiety=fluoride;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch JAXGFV010000018.1 Genbank pseudogene 26640 27293 . - . ID=gene-SNF32_09535;Name=SNF32_09535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09535;pseudo=true JAXGFV010000018.1 Protein Homology CDS 26640 27293 . - 0 ID=cds-SNF32_09535;Parent=gene-SNF32_09535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010728800.1;locus_tag=SNF32_09535;product=FusB/FusC family EF-G-binding protein;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 27573 28075 . - . ID=gene-SNF32_09540;Name=SNF32_09540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09540;pseudo=true JAXGFV010000018.1 Protein Homology CDS 27573 28075 . - 0 ID=cds-SNF32_09540;Parent=gene-SNF32_09540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002348853.1;locus_tag=SNF32_09540;product=HD domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 28199 28943 . - . ID=gene-SNF32_09545;Name=SNF32_09545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09545;pseudo=true JAXGFV010000018.1 Protein Homology CDS 28199 28943 . - 0 ID=cds-SNF32_09545;Parent=gene-SNF32_09545;Note=frameshifted;Ontology_term=GO:0001510,GO:0008173,GO:0016740;gbkey=CDS;go_function=RNA methyltransferase activity|0008173||IEA,transferase activity|0016740||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723694.1;locus_tag=SNF32_09545;product=RNA methyltransferase;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 29064 29338 . + . ID=gene-SNF32_09550;Name=SNF32_09550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09550;pseudo=true JAXGFV010000018.1 Protein Homology CDS 29064 29338 . + 0 ID=cds-SNF32_09550;Parent=gene-SNF32_09550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002346033.1;locus_tag=SNF32_09550;product=acylphosphatase;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 29558 30492 . + . ID=gene-SNF32_09555;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=pseudogene;locus_tag=SNF32_09555;pseudo=true JAXGFV010000018.1 Protein Homology CDS 29558 30492 . + 0 ID=cds-SNF32_09555;Parent=gene-SNF32_09555;Note=frameshifted;Ontology_term=GO:0051205,GO:0003674,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=molecular_function|0003674||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002306243.1;locus_tag=SNF32_09555;product=membrane protein insertase YidC;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 30551 32616 . - . ID=gene-SNF32_09560;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=pseudogene;locus_tag=SNF32_09560;pseudo=true JAXGFV010000018.1 Protein Homology CDS 30551 32616 . - 0 ID=cds-SNF32_09560;Parent=gene-SNF32_09560;Note=frameshifted;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyS;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010728817.1;locus_tag=SNF32_09560;product=glycine--tRNA ligase subunit beta;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank gene 32618 33535 . - . ID=gene-SNF32_09565;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=SNF32_09565 JAXGFV010000018.1 Protein Homology CDS 32618 33535 . - 0 ID=cds-MDY4307471.1;Parent=gene-SNF32_09565;Dbxref=NCBI_GP:MDY4307471.1;Name=MDY4307471.1;Ontology_term=GO:0006426,GO:0004820,GO:0009345;gbkey=CDS;gene=glyQ;go_component=glycine-tRNA ligase complex|0009345||IEA;go_function=glycine-tRNA ligase activity|0004820||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002338965.1;locus_tag=SNF32_09565;product=glycine--tRNA ligase subunit alpha;protein_id=MDY4307471.1;transl_table=11 JAXGFV010000018.1 Genbank gene 33909 34712 . - . ID=gene-SNF32_09570;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=SNF32_09570 JAXGFV010000018.1 Protein Homology CDS 33909 34712 . - 0 ID=cds-MDY4307472.1;Parent=gene-SNF32_09570;Dbxref=NCBI_GP:MDY4307472.1;Name=MDY4307472.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734963.1;locus_tag=SNF32_09570;product=DNA repair protein RecO;protein_id=MDY4307472.1;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 34993 35890 . - . ID=gene-SNF32_09575;Name=era;gbkey=Gene;gene=era;gene_biotype=pseudogene;locus_tag=SNF32_09575;pseudo=true JAXGFV010000018.1 Protein Homology CDS 34993 35890 . - 0 ID=cds-SNF32_09575;Parent=gene-SNF32_09575;Note=frameshifted;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016625712.1;locus_tag=SNF32_09575;product=GTPase Era;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 35921 36308 . - . ID=gene-SNF32_09580;Name=SNF32_09580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09580;pseudo=true JAXGFV010000018.1 Protein Homology CDS 35921 36308 . - 0 ID=cds-SNF32_09580;Parent=gene-SNF32_09580;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016631379.1;locus_tag=SNF32_09580;product=diacylglycerol kinase family protein;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 36292 36767 . - . ID=gene-SNF32_09585;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=pseudogene;locus_tag=SNF32_09585;pseudo=true JAXGFV010000018.1 Protein Homology CDS 36292 36767 . - 0 ID=cds-SNF32_09585;Parent=gene-SNF32_09585;Note=frameshifted;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002322767.1;locus_tag=SNF32_09585;product=rRNA maturation RNase YbeY;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank gene 36805 36969 . - . ID=gene-SNF32_09590;Name=SNF32_09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09590 JAXGFV010000018.1 GeneMarkS-2+ CDS 36805 36969 . - 0 ID=cds-MDY4307473.1;Parent=gene-SNF32_09590;Dbxref=NCBI_GP:MDY4307473.1;Name=MDY4307473.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09590;product=hypothetical protein;protein_id=MDY4307473.1;transl_table=11 JAXGFV010000018.1 Genbank gene 36957 37232 . - . ID=gene-SNF32_09595;Name=SNF32_09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09595 JAXGFV010000018.1 Protein Homology CDS 36957 37232 . - 0 ID=cds-MDY4307474.1;Parent=gene-SNF32_09595;Dbxref=NCBI_GP:MDY4307474.1;Name=MDY4307474.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014069.3;locus_tag=SNF32_09595;product=HD domain-containing protein;protein_id=MDY4307474.1;transl_table=11 JAXGFV010000018.1 Genbank gene 37229 37591 . - . ID=gene-SNF32_09600;Name=SNF32_09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09600 JAXGFV010000018.1 Protein Homology CDS 37229 37591 . - 0 ID=cds-MDY4307475.1;Parent=gene-SNF32_09600;Dbxref=NCBI_GP:MDY4307475.1;Name=MDY4307475.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014069.3;locus_tag=SNF32_09600;product=HDIG domain-containing protein;protein_id=MDY4307475.1;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 37586 37867 . - . ID=gene-SNF32_09605;Name=SNF32_09605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09605;pseudo=true JAXGFV010000018.1 Protein Homology CDS 37586 37867 . - 0 ID=cds-SNF32_09605;Parent=gene-SNF32_09605;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019318.3;locus_tag=SNF32_09605;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank gene 37786 38094 . - . ID=gene-SNF32_09610;Name=SNF32_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09610 JAXGFV010000018.1 Protein Homology CDS 37786 38094 . - 0 ID=cds-MDY4307476.1;Parent=gene-SNF32_09610;Dbxref=NCBI_GP:MDY4307476.1;Name=MDY4307476.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019318.3;locus_tag=SNF32_09610;product=hypothetical protein;protein_id=MDY4307476.1;transl_table=11 JAXGFV010000018.1 Genbank gene 38145 38744 . - . ID=gene-SNF32_09615;Name=SNF32_09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09615 JAXGFV010000018.1 Protein Homology CDS 38145 38744 . - 0 ID=cds-MDY4307477.1;Parent=gene-SNF32_09615;Dbxref=NCBI_GP:MDY4307477.1;Name=MDY4307477.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019317.3;locus_tag=SNF32_09615;product=hypothetical protein;protein_id=MDY4307477.1;transl_table=11 JAXGFV010000018.1 Genbank gene 38756 38971 . - . ID=gene-SNF32_09620;Name=SNF32_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09620 JAXGFV010000018.1 GeneMarkS-2+ CDS 38756 38971 . - 0 ID=cds-MDY4307478.1;Parent=gene-SNF32_09620;Dbxref=NCBI_GP:MDY4307478.1;Name=MDY4307478.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09620;product=hypothetical protein;protein_id=MDY4307478.1;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 38992 39958 . - . ID=gene-SNF32_09625;Name=SNF32_09625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09625;pseudo=true JAXGFV010000018.1 Protein Homology CDS 38992 39958 . - 0 ID=cds-SNF32_09625;Parent=gene-SNF32_09625;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016631377.1;locus_tag=SNF32_09625;product=PhoH family protein;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank gene 40288 40734 . - . ID=gene-SNF32_09630;Name=SNF32_09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09630 JAXGFV010000018.1 Protein Homology CDS 40288 40734 . - 0 ID=cds-MDY4307479.1;Parent=gene-SNF32_09630;Dbxref=NCBI_GP:MDY4307479.1;Name=MDY4307479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734957.1;locus_tag=SNF32_09630;product=GatB/YqeY domain-containing protein;protein_id=MDY4307479.1;transl_table=11 JAXGFV010000018.1 Genbank gene 40736 40936 . - . ID=gene-SNF32_09635;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=SNF32_09635 JAXGFV010000018.1 Protein Homology CDS 40736 40936 . - 0 ID=cds-MDY4307480.1;Parent=gene-SNF32_09635;Dbxref=NCBI_GP:MDY4307480.1;Name=MDY4307480.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014334939.1;locus_tag=SNF32_09635;product=30S ribosomal protein S21;protein_id=MDY4307480.1;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 41100 41527 . - . ID=gene-SNF32_09640;Name=SNF32_09640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09640;pseudo=true JAXGFV010000018.1 Protein Homology CDS 41100 41527 . - 0 ID=cds-SNF32_09640;Parent=gene-SNF32_09640;Note=frameshifted;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002319219.1;locus_tag=SNF32_09640;product=transcriptional repressor;pseudo=true;transl_table=11 JAXGFV010000018.1 Genbank pseudogene 41703 42470 . + . ID=gene-SNF32_09645;Name=SNF32_09645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09645;pseudo=true JAXGFV010000018.1 Protein Homology CDS 41703 42470 . + 0 ID=cds-SNF32_09645;Parent=gene-SNF32_09645;Note=frameshifted;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: protein motif:HMM:NF015575.3;locus_tag=SNF32_09645;product=pyruvate%2C water dikinase regulatory protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000019.1 1 41330 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000019.1 Genbank region 1 41330 . + . ID=JAXGFV010000019.1:1..41330;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000019.1 Genbank pseudogene 350 764 . + . ID=gene-SNF32_09650;Name=SNF32_09650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09650;pseudo=true JAXGFV010000019.1 Protein Homology CDS 350 764 . + 0 ID=cds-SNF32_09650;Parent=gene-SNF32_09650;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002337268.1;locus_tag=SNF32_09650;product=ArpU family phage packaging/lysis transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000019.1 Genbank gene 1860 2039 . + . ID=gene-SNF32_09655;Name=SNF32_09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09655 JAXGFV010000019.1 Protein Homology CDS 1860 2039 . + 0 ID=cds-MDY4307481.1;Parent=gene-SNF32_09655;Dbxref=NCBI_GP:MDY4307481.1;Name=MDY4307481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010733976.1;locus_tag=SNF32_09655;product=hypothetical protein;protein_id=MDY4307481.1;transl_table=11 JAXGFV010000019.1 Genbank gene 2039 2281 . + . ID=gene-SNF32_09660;Name=SNF32_09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09660 JAXGFV010000019.1 Protein Homology CDS 2039 2281 . + 0 ID=cds-MDY4307482.1;Parent=gene-SNF32_09660;Dbxref=NCBI_GP:MDY4307482.1;Name=MDY4307482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010733977.1;locus_tag=SNF32_09660;product=hypothetical protein;protein_id=MDY4307482.1;transl_table=11 JAXGFV010000019.1 Genbank pseudogene 2271 3540 . + . ID=gene-SNF32_09665;Name=SNF32_09665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09665;pseudo=true JAXGFV010000019.1 Protein Homology CDS 2271 3540 . + 0 ID=cds-SNF32_09665;Parent=gene-SNF32_09665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010733978.1;locus_tag=SNF32_09665;product=site-specific DNA-methyltransferase;pseudo=true;transl_table=11 JAXGFV010000019.1 Genbank pseudogene 3677 3885 . + . ID=gene-SNF32_09670;Name=SNF32_09670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09670;pseudo=true JAXGFV010000019.1 Protein Homology CDS 3677 3885 . + 0 ID=cds-SNF32_09670;Parent=gene-SNF32_09670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010738776.1;locus_tag=SNF32_09670;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000019.1 Genbank gene 4063 4410 . + . ID=gene-SNF32_09675;Name=SNF32_09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09675 JAXGFV010000019.1 GeneMarkS-2+ CDS 4063 4410 . + 0 ID=cds-MDY4307483.1;Parent=gene-SNF32_09675;Dbxref=NCBI_GP:MDY4307483.1;Name=MDY4307483.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09675;product=hypothetical protein;protein_id=MDY4307483.1;transl_table=11 JAXGFV010000019.1 Genbank gene 4407 4625 . + . ID=gene-SNF32_09680;Name=SNF32_09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09680 JAXGFV010000019.1 GeneMarkS-2+ CDS 4407 4625 . + 0 ID=cds-MDY4307484.1;Parent=gene-SNF32_09680;Dbxref=NCBI_GP:MDY4307484.1;Name=MDY4307484.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09680;product=hypothetical protein;protein_id=MDY4307484.1;transl_table=11 JAXGFV010000019.1 Genbank gene 4672 5568 . + . ID=gene-SNF32_09685;Name=terS;gbkey=Gene;gene=terS;gene_biotype=protein_coding;locus_tag=SNF32_09685 JAXGFV010000019.1 Protein Homology CDS 4672 5568 . + 0 ID=cds-MDY4307485.1;Parent=gene-SNF32_09685;Dbxref=NCBI_GP:MDY4307485.1;Name=MDY4307485.1;gbkey=CDS;gene=terS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010733981.1;locus_tag=SNF32_09685;product=phage terminase small subunit;protein_id=MDY4307485.1;transl_table=11 JAXGFV010000019.1 Genbank pseudogene 5543 6837 . + . ID=gene-SNF32_09690;Name=SNF32_09690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09690;pseudo=true JAXGFV010000019.1 Protein Homology CDS 5543 6837 . + 0 ID=cds-SNF32_09690;Parent=gene-SNF32_09690;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016610894.1;locus_tag=SNF32_09690;product=PBSX family phage terminase large subunit;pseudo=true;transl_table=11 JAXGFV010000019.1 Genbank gene 6852 7166 . + . ID=gene-SNF32_09695;Name=SNF32_09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09695 JAXGFV010000019.1 GeneMarkS-2+ CDS 6852 7166 . + 0 ID=cds-MDY4307486.1;Parent=gene-SNF32_09695;Dbxref=NCBI_GP:MDY4307486.1;Name=MDY4307486.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09695;product=hypothetical protein;protein_id=MDY4307486.1;transl_table=11 JAXGFV010000019.1 Genbank gene 7172 7504 . + . ID=gene-SNF32_09700;Name=SNF32_09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09700 JAXGFV010000019.1 Protein Homology CDS 7172 7504 . + 0 ID=cds-MDY4307487.1;Parent=gene-SNF32_09700;Dbxref=NCBI_GP:MDY4307487.1;Name=MDY4307487.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016988.3;locus_tag=SNF32_09700;product=phage portal protein;protein_id=MDY4307487.1;transl_table=11 JAXGFV010000019.1 Genbank gene 7489 8244 . + . ID=gene-SNF32_09705;Name=SNF32_09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09705 JAXGFV010000019.1 Protein Homology CDS 7489 8244 . + 0 ID=cds-MDY4307488.1;Parent=gene-SNF32_09705;Dbxref=NCBI_GP:MDY4307488.1;Name=MDY4307488.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016988.3;locus_tag=SNF32_09705;product=phage portal protein;protein_id=MDY4307488.1;transl_table=11 JAXGFV010000019.1 Genbank pseudogene 8455 9539 . + . ID=gene-SNF32_09710;Name=SNF32_09710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09710;pseudo=true JAXGFV010000019.1 Protein Homology CDS 8455 9539 . + 0 ID=cds-SNF32_09710;Parent=gene-SNF32_09710;Note=frameshifted;Ontology_term=GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: protein motif:HMM:NF017919.3;locus_tag=SNF32_09710;product=phage minor capsid protein;pseudo=true;transl_table=11 JAXGFV010000019.1 Genbank gene 9773 10030 . + . ID=gene-SNF32_09715;Name=SNF32_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09715 JAXGFV010000019.1 GeneMarkS-2+ CDS 9773 10030 . + 0 ID=cds-MDY4307489.1;Parent=gene-SNF32_09715;Dbxref=NCBI_GP:MDY4307489.1;Name=MDY4307489.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09715;product=hypothetical protein;protein_id=MDY4307489.1;transl_table=11 JAXGFV010000019.1 Genbank gene 10036 10329 . + . ID=gene-SNF32_09720;Name=SNF32_09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09720 JAXGFV010000019.1 Protein Homology CDS 10036 10329 . + 0 ID=cds-MDY4307490.1;Parent=gene-SNF32_09720;Dbxref=NCBI_GP:MDY4307490.1;Name=MDY4307490.1;Ontology_term=GO:0019069;gbkey=CDS;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: protein motif:HMM:NF018515.3;locus_tag=SNF32_09720;product=phage scaffolding protein;protein_id=MDY4307490.1;transl_table=11 JAXGFV010000019.1 Genbank gene 10374 11261 . + . ID=gene-SNF32_09725;Name=SNF32_09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09725 JAXGFV010000019.1 Protein Homology CDS 10374 11261 . + 0 ID=cds-MDY4307491.1;Parent=gene-SNF32_09725;Dbxref=NCBI_GP:MDY4307491.1;Name=MDY4307491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010733986.1;locus_tag=SNF32_09725;product=capsid protein;protein_id=MDY4307491.1;transl_table=11 JAXGFV010000019.1 Genbank gene 11258 11422 . + . ID=gene-SNF32_09730;Name=SNF32_09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09730 JAXGFV010000019.1 Protein Homology CDS 11258 11422 . + 0 ID=cds-MDY4307492.1;Parent=gene-SNF32_09730;Dbxref=NCBI_GP:MDY4307492.1;Name=MDY4307492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016621478.1;locus_tag=SNF32_09730;product=HeH/LEM domain-containing protein;protein_id=MDY4307492.1;transl_table=11 JAXGFV010000019.1 Genbank gene 11552 11908 . + . ID=gene-SNF32_09735;Name=SNF32_09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09735 JAXGFV010000019.1 GeneMarkS-2+ CDS 11552 11908 . + 0 ID=cds-MDY4307493.1;Parent=gene-SNF32_09735;Dbxref=NCBI_GP:MDY4307493.1;Name=MDY4307493.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09735;product=hypothetical protein;protein_id=MDY4307493.1;transl_table=11 JAXGFV010000019.1 Genbank gene 11911 12192 . + . ID=gene-SNF32_09740;Name=SNF32_09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09740 JAXGFV010000019.1 GeneMarkS-2+ CDS 11911 12192 . + 0 ID=cds-MDY4307494.1;Parent=gene-SNF32_09740;Dbxref=NCBI_GP:MDY4307494.1;Name=MDY4307494.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09740;product=hypothetical protein;protein_id=MDY4307494.1;transl_table=11 JAXGFV010000019.1 Genbank gene 12150 12239 . + . ID=gene-SNF32_09745;Name=SNF32_09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09745 JAXGFV010000019.1 Protein Homology CDS 12150 12239 . + 0 ID=cds-MDY4307495.1;Parent=gene-SNF32_09745;Dbxref=NCBI_GP:MDY4307495.1;Name=MDY4307495.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022130.3;locus_tag=SNF32_09745;product=hypothetical protein;protein_id=MDY4307495.1;transl_table=11 JAXGFV010000019.1 Genbank gene 12239 12601 . + . ID=gene-SNF32_09750;Name=SNF32_09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09750 JAXGFV010000019.1 Protein Homology CDS 12239 12601 . + 0 ID=cds-MDY4307496.1;Parent=gene-SNF32_09750;Dbxref=NCBI_GP:MDY4307496.1;Name=MDY4307496.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022564.3;locus_tag=SNF32_09750;product=minor capsid protein;protein_id=MDY4307496.1;transl_table=11 JAXGFV010000019.1 Genbank gene 12595 12945 . + . ID=gene-SNF32_09755;Name=SNF32_09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09755 JAXGFV010000019.1 GeneMarkS-2+ CDS 12595 12945 . + 0 ID=cds-MDY4307497.1;Parent=gene-SNF32_09755;Dbxref=NCBI_GP:MDY4307497.1;Name=MDY4307497.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09755;product=minor capsid protein;protein_id=MDY4307497.1;transl_table=11 JAXGFV010000019.1 Genbank gene 13061 13462 . + . ID=gene-SNF32_09760;Name=SNF32_09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09760 JAXGFV010000019.1 GeneMarkS-2+ CDS 13061 13462 . + 0 ID=cds-MDY4307498.1;Parent=gene-SNF32_09760;Dbxref=NCBI_GP:MDY4307498.1;Name=MDY4307498.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09760;product=phage tail protein;protein_id=MDY4307498.1;transl_table=11 JAXGFV010000019.1 Genbank gene 13605 13991 . + . ID=gene-SNF32_09765;Name=SNF32_09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09765 JAXGFV010000019.1 GeneMarkS-2+ CDS 13605 13991 . + 0 ID=cds-MDY4307499.1;Parent=gene-SNF32_09765;Dbxref=NCBI_GP:MDY4307499.1;Name=MDY4307499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09765;product=hypothetical protein;protein_id=MDY4307499.1;transl_table=11 JAXGFV010000019.1 Genbank pseudogene 14120 14641 . + . ID=gene-SNF32_09770;Name=SNF32_09770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09770;pseudo=true JAXGFV010000019.1 Protein Homology CDS 14120 14641 . + 0 ID=cds-SNF32_09770;Parent=gene-SNF32_09770;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018553.3;locus_tag=SNF32_09770;product=Gp15 family bacteriophage protein;pseudo=true;transl_table=11 JAXGFV010000019.1 Genbank gene 14769 15491 . + . ID=gene-SNF32_09775;Name=SNF32_09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09775 JAXGFV010000019.1 GeneMarkS-2+ CDS 14769 15491 . + 0 ID=cds-MDY4307500.1;Parent=gene-SNF32_09775;Dbxref=NCBI_GP:MDY4307500.1;Name=MDY4307500.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09775;product=hypothetical protein;protein_id=MDY4307500.1;transl_table=11 JAXGFV010000019.1 Genbank gene 15455 16795 . + . ID=gene-SNF32_09780;Name=SNF32_09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09780 JAXGFV010000019.1 Protein Homology CDS 15455 16795 . + 0 ID=cds-MDY4307501.1;Parent=gene-SNF32_09780;Dbxref=NCBI_GP:MDY4307501.1;Name=MDY4307501.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040129.2;locus_tag=SNF32_09780;product=tape measure protein;protein_id=MDY4307501.1;transl_table=11 JAXGFV010000019.1 Genbank gene 16912 17607 . + . ID=gene-SNF32_09785;Name=SNF32_09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09785 JAXGFV010000019.1 GeneMarkS-2+ CDS 16912 17607 . + 0 ID=cds-MDY4307502.1;Parent=gene-SNF32_09785;Dbxref=NCBI_GP:MDY4307502.1;Name=MDY4307502.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09785;product=hypothetical protein;protein_id=MDY4307502.1;transl_table=11 JAXGFV010000019.1 Genbank gene 17604 17861 . + . ID=gene-SNF32_09790;Name=SNF32_09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09790 JAXGFV010000019.1 GeneMarkS-2+ CDS 17604 17861 . + 0 ID=cds-MDY4307503.1;Parent=gene-SNF32_09790;Dbxref=NCBI_GP:MDY4307503.1;Name=MDY4307503.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09790;product=hypothetical protein;protein_id=MDY4307503.1;transl_table=11 JAXGFV010000019.1 Genbank gene 17822 19675 . + . ID=gene-SNF32_09795;Name=SNF32_09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09795 JAXGFV010000019.1 GeneMarkS-2+ CDS 17822 19675 . + 0 ID=cds-MDY4307504.1;Parent=gene-SNF32_09795;Dbxref=NCBI_GP:MDY4307504.1;Name=MDY4307504.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09795;product=hypothetical protein;protein_id=MDY4307504.1;transl_table=11 JAXGFV010000019.1 Genbank gene 19675 19977 . + . ID=gene-SNF32_09800;Name=SNF32_09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09800 JAXGFV010000019.1 GeneMarkS-2+ CDS 19675 19977 . + 0 ID=cds-MDY4307505.1;Parent=gene-SNF32_09800;Dbxref=NCBI_GP:MDY4307505.1;Name=MDY4307505.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09800;product=hypothetical protein;protein_id=MDY4307505.1;transl_table=11 JAXGFV010000019.1 Genbank gene 20349 20546 . + . ID=gene-SNF32_09805;Name=SNF32_09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09805 JAXGFV010000019.1 GeneMarkS-2+ CDS 20349 20546 . + 0 ID=cds-MDY4307506.1;Parent=gene-SNF32_09805;Dbxref=NCBI_GP:MDY4307506.1;Name=MDY4307506.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09805;product=hypothetical protein;protein_id=MDY4307506.1;transl_table=11 JAXGFV010000019.1 Genbank gene 20546 21097 . + . ID=gene-SNF32_09810;Name=SNF32_09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09810 JAXGFV010000019.1 GeneMarkS-2+ CDS 20546 21097 . + 0 ID=cds-MDY4307507.1;Parent=gene-SNF32_09810;Dbxref=NCBI_GP:MDY4307507.1;Name=MDY4307507.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09810;product=hypothetical protein;protein_id=MDY4307507.1;transl_table=11 JAXGFV010000019.1 Genbank gene 21097 21498 . + . ID=gene-SNF32_09815;Name=SNF32_09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09815 JAXGFV010000019.1 GeneMarkS-2+ CDS 21097 21498 . + 0 ID=cds-MDY4307508.1;Parent=gene-SNF32_09815;Dbxref=NCBI_GP:MDY4307508.1;Name=MDY4307508.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09815;product=hypothetical protein;protein_id=MDY4307508.1;transl_table=11 JAXGFV010000019.1 Genbank gene 21746 23755 . + . ID=gene-SNF32_09820;Name=SNF32_09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09820 JAXGFV010000019.1 Protein Homology CDS 21746 23755 . + 0 ID=cds-MDY4307509.1;Parent=gene-SNF32_09820;Dbxref=NCBI_GP:MDY4307509.1;Name=MDY4307509.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022117.3;locus_tag=SNF32_09820;product=BppU family phage baseplate upper protein;protein_id=MDY4307509.1;transl_table=11 JAXGFV010000019.1 Genbank gene 24301 24882 . + . ID=gene-SNF32_09825;Name=SNF32_09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09825 JAXGFV010000019.1 GeneMarkS-2+ CDS 24301 24882 . + 0 ID=cds-MDY4307510.1;Parent=gene-SNF32_09825;Dbxref=NCBI_GP:MDY4307510.1;Name=MDY4307510.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09825;product=hypothetical protein;protein_id=MDY4307510.1;transl_table=11 JAXGFV010000019.1 Genbank gene 24963 25106 . + . ID=gene-SNF32_09830;Name=SNF32_09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09830 JAXGFV010000019.1 GeneMarkS-2+ CDS 24963 25106 . + 0 ID=cds-MDY4307511.1;Parent=gene-SNF32_09830;Dbxref=NCBI_GP:MDY4307511.1;Name=MDY4307511.1;Ontology_term=GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09830;product=alpha-amylase domain-containing protein;protein_id=MDY4307511.1;transl_table=11 JAXGFV010000019.1 Genbank gene 25124 25615 . + . ID=gene-SNF32_09835;Name=SNF32_09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09835 JAXGFV010000019.1 Protein Homology CDS 25124 25615 . + 0 ID=cds-MDY4307512.1;Parent=gene-SNF32_09835;Dbxref=NCBI_GP:MDY4307512.1;Name=MDY4307512.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018631.3;locus_tag=SNF32_09835;product=holin;protein_id=MDY4307512.1;transl_table=11 JAXGFV010000019.1 Genbank gene 25683 26576 . + . ID=gene-SNF32_09840;Name=SNF32_09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09840 JAXGFV010000019.1 Protein Homology CDS 25683 26576 . + 0 ID=cds-MDY4307513.1;Parent=gene-SNF32_09840;Dbxref=NCBI_GP:MDY4307513.1;Name=MDY4307513.1;Ontology_term=GO:0042834,GO:0046872;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735414.1;locus_tag=SNF32_09840;product=peptidoglycan recognition family protein;protein_id=MDY4307513.1;transl_table=11 JAXGFV010000019.1 Genbank gene 29802 29879 . + . ID=gene-SNF32_09845;Name=SNF32_09845;gbkey=Gene;gene_biotype=tRNA;locus_tag=SNF32_09845 JAXGFV010000019.1 tRNAscan-SE tRNA 29802 29879 . + . ID=rna-SNF32_09845;Parent=gene-SNF32_09845;anticodon=(pos:29840..29842);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_09845;product=tRNA-Ile JAXGFV010000019.1 tRNAscan-SE exon 29802 29879 . + . ID=exon-SNF32_09845-1;Parent=rna-SNF32_09845;anticodon=(pos:29840..29842);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_09845;product=tRNA-Ile JAXGFV010000019.1 Genbank gene 29951 30571 . - . ID=gene-SNF32_09850;Name=SNF32_09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09850 JAXGFV010000019.1 Protein Homology CDS 29951 30571 . - 0 ID=cds-MDY4307514.1;Parent=gene-SNF32_09850;Dbxref=NCBI_GP:MDY4307514.1;Name=MDY4307514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002347910.1;locus_tag=SNF32_09850;product=hypothetical protein;protein_id=MDY4307514.1;transl_table=11 JAXGFV010000019.1 Genbank gene 31727 31915 . - . ID=gene-SNF32_09855;Name=SNF32_09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09855 JAXGFV010000019.1 Protein Homology CDS 31727 31915 . - 0 ID=cds-MDY4307515.1;Parent=gene-SNF32_09855;Dbxref=NCBI_GP:MDY4307515.1;Name=MDY4307515.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040275.2;locus_tag=SNF32_09855;product=DUF5960 family protein;protein_id=MDY4307515.1;transl_table=11 JAXGFV010000019.1 Genbank gene 32009 32401 . - . ID=gene-SNF32_09860;Name=SNF32_09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09860 JAXGFV010000019.1 Protein Homology CDS 32009 32401 . - 0 ID=cds-MDY4307516.1;Parent=gene-SNF32_09860;Dbxref=NCBI_GP:MDY4307516.1;Name=MDY4307516.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021378.3;locus_tag=SNF32_09860;product=SHOCT domain-containing protein;protein_id=MDY4307516.1;transl_table=11 JAXGFV010000019.1 Genbank pseudogene 33130 33309 . - . ID=gene-SNF32_09865;Name=SNF32_09865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09865;pseudo=true JAXGFV010000019.1 Protein Homology CDS 33130 33309 . - 0 ID=cds-SNF32_09865;Parent=gene-SNF32_09865;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002342980.1;locus_tag=SNF32_09865;product=DUF5960 family protein;pseudo=true;transl_table=11 JAXGFV010000019.1 Genbank gene 33978 34184 . + . ID=gene-SNF32_09870;Name=SNF32_09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09870 JAXGFV010000019.1 GeneMarkS-2+ CDS 33978 34184 . + 0 ID=cds-MDY4307517.1;Parent=gene-SNF32_09870;Dbxref=NCBI_GP:MDY4307517.1;Name=MDY4307517.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09870;product=hypothetical protein;protein_id=MDY4307517.1;transl_table=11 JAXGFV010000019.1 Genbank gene 34181 34363 . + . ID=gene-SNF32_09875;Name=SNF32_09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09875 JAXGFV010000019.1 Protein Homology CDS 34181 34363 . + 0 ID=cds-MDY4307518.1;Parent=gene-SNF32_09875;Dbxref=NCBI_GP:MDY4307518.1;Name=MDY4307518.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF014717.3;locus_tag=SNF32_09875;product=FtsX-like permease family protein;protein_id=MDY4307518.1;transl_table=11 JAXGFV010000019.1 Genbank gene 34785 35363 . + . ID=gene-SNF32_09880;Name=SNF32_09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09880 JAXGFV010000019.1 GeneMarkS-2+ CDS 34785 35363 . + 0 ID=cds-MDY4307519.1;Parent=gene-SNF32_09880;Dbxref=NCBI_GP:MDY4307519.1;Name=MDY4307519.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09880;product=hypothetical protein;protein_id=MDY4307519.1;transl_table=11 JAXGFV010000019.1 Genbank pseudogene 35532 36237 . + . ID=gene-SNF32_09885;Name=SNF32_09885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09885;pseudo=true JAXGFV010000019.1 Protein Homology CDS 35532 36237 . + 0 ID=cds-SNF32_09885;Parent=gene-SNF32_09885;Note=frameshifted%3B internal stop;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735343.1;locus_tag=SNF32_09885;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000019.1 Genbank pseudogene 36461 37839 . + . ID=gene-SNF32_09890;Name=SNF32_09890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09890;pseudo=true JAXGFV010000019.1 Protein Homology CDS 36461 37839 . + 0 ID=cds-SNF32_09890;Parent=gene-SNF32_09890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735344.1;locus_tag=SNF32_09890;product=C39 family peptidase;pseudo=true;transl_table=11 JAXGFV010000019.1 Genbank gene 38313 38444 . + . ID=gene-SNF32_09895;Name=SNF32_09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09895 JAXGFV010000019.1 GeneMarkS-2+ CDS 38313 38444 . + 0 ID=cds-MDY4307520.1;Parent=gene-SNF32_09895;Dbxref=NCBI_GP:MDY4307520.1;Name=MDY4307520.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09895;product=hypothetical protein;protein_id=MDY4307520.1;transl_table=11 JAXGFV010000019.1 Genbank gene 38679 38954 . + . ID=gene-SNF32_09900;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=SNF32_09900 JAXGFV010000019.1 Protein Homology CDS 38679 38954 . + 0 ID=cds-MDY4307521.1;Parent=gene-SNF32_09900;Dbxref=NCBI_GP:MDY4307521.1;Name=MDY4307521.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010824039.1;locus_tag=SNF32_09900;product=30S ribosomal protein S14;protein_id=MDY4307521.1;transl_table=11 JAXGFV010000019.1 Genbank pseudogene 38971 39137 . + . ID=gene-SNF32_09905;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=pseudogene;locus_tag=SNF32_09905;pseudo=true JAXGFV010000019.1 Protein Homology CDS 38971 39137 . + 0 ID=cds-SNF32_09905;Parent=gene-SNF32_09905;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724115.1;locus_tag=SNF32_09905;product=50S ribosomal protein L32;pseudo=true;transl_table=11 JAXGFV010000019.1 Genbank pseudogene 39166 39542 . + . ID=gene-SNF32_09910;Name=SNF32_09910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09910;pseudo=true JAXGFV010000019.1 Protein Homology CDS 39166 39542 . + 0 ID=cds-SNF32_09910;Parent=gene-SNF32_09910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016252202.1;locus_tag=SNF32_09910;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000019.1 Genbank gene 39579 39986 . + . ID=gene-SNF32_09915;Name=SNF32_09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09915 JAXGFV010000019.1 Protein Homology CDS 39579 39986 . + 0 ID=cds-MDY4307522.1;Parent=gene-SNF32_09915;Dbxref=NCBI_GP:MDY4307522.1;Name=MDY4307522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724113.1;locus_tag=SNF32_09915;product=NusG domain II-containing protein;protein_id=MDY4307522.1;transl_table=11 JAXGFV010000019.1 Genbank gene 40335 40511 . + . ID=gene-SNF32_09920;Name=SNF32_09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09920 JAXGFV010000019.1 Protein Homology CDS 40335 40511 . + 0 ID=cds-MDY4307523.1;Parent=gene-SNF32_09920;Dbxref=NCBI_GP:MDY4307523.1;Name=MDY4307523.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019321851.1;locus_tag=SNF32_09920;product=MerR family DNA-binding transcriptional regulator;protein_id=MDY4307523.1;transl_table=11 ##sequence-region JAXGFV010000002.1 1 195486 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000002.1 Genbank region 1 195486 . + . ID=JAXGFV010000002.1:1..195486;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000002.1 Genbank pseudogene 76 1608 . - . ID=gene-SNF32_01130;Name=SNF32_01130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01130;pseudo=true JAXGFV010000002.1 Protein Homology CDS 76 1608 . - 0 ID=cds-SNF32_01130;Parent=gene-SNF32_01130;Note=frameshifted;Ontology_term=GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016623717.1;locus_tag=SNF32_01130;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 1925 3275 . - . ID=gene-SNF32_01135;Name=murF;gbkey=Gene;gene=murF;gene_biotype=pseudogene;locus_tag=SNF32_01135;pseudo=true JAXGFV010000002.1 Protein Homology CDS 1925 3275 . - 0 ID=cds-SNF32_01135;Parent=gene-SNF32_01135;Note=frameshifted;Ontology_term=GO:0009252,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354419.1;locus_tag=SNF32_01135;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 3472 4536 . - . ID=gene-SNF32_01140;Name=SNF32_01140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01140;pseudo=true JAXGFV010000002.1 Protein Homology CDS 3472 4536 . - 0 ID=cds-SNF32_01140;Parent=gene-SNF32_01140;Note=frameshifted;Ontology_term=GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722696.1;locus_tag=SNF32_01140;product=D-alanine--D-alanine ligase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 4713 6452 . + . ID=gene-SNF32_01145;Name=SNF32_01145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01145;pseudo=true JAXGFV010000002.1 Protein Homology CDS 4713 6452 . + 0 ID=cds-SNF32_01145;Parent=gene-SNF32_01145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002342755.1;locus_tag=SNF32_01145;product=AarF/UbiB family protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 6630 6995 . - . ID=gene-SNF32_01150;Name=SNF32_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01150 JAXGFV010000002.1 Protein Homology CDS 6630 6995 . - 0 ID=cds-MDY4306572.1;Parent=gene-SNF32_01150;Dbxref=NCBI_GP:MDY4306572.1;Name=MDY4306572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002337649.1;locus_tag=SNF32_01150;product=DUF2512 family protein;protein_id=MDY4306572.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 7169 7644 . - . ID=gene-SNF32_01155;Name=SNF32_01155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01155;pseudo=true JAXGFV010000002.1 Protein Homology CDS 7169 7644 . - 0 ID=cds-SNF32_01155;Parent=gene-SNF32_01155;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734359.1;locus_tag=SNF32_01155;product=YaiI/YqxD family protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 7618 8966 . - . ID=gene-SNF32_01160;Name=SNF32_01160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01160;pseudo=true JAXGFV010000002.1 Protein Homology CDS 7618 8966 . - 0 ID=cds-SNF32_01160;Parent=gene-SNF32_01160;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002344718.1;locus_tag=SNF32_01160;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 9392 9886 . - . ID=gene-SNF32_01165;Name=SNF32_01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01165 JAXGFV010000002.1 Protein Homology CDS 9392 9886 . - 0 ID=cds-MDY4306573.1;Parent=gene-SNF32_01165;Dbxref=NCBI_GP:MDY4306573.1;Name=MDY4306573.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003126129.1;locus_tag=SNF32_01165;product=GNAT family N-acetyltransferase;protein_id=MDY4306573.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 9912 10511 . - . ID=gene-SNF32_01170;Name=SNF32_01170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01170;pseudo=true JAXGFV010000002.1 Protein Homology CDS 9912 10511 . - 0 ID=cds-SNF32_01170;Parent=gene-SNF32_01170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734362.1;locus_tag=SNF32_01170;product=VTT domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 10854 11469 . - . ID=gene-SNF32_01175;Name=udk;gbkey=Gene;gene=udk;gene_biotype=pseudogene;locus_tag=SNF32_01175;pseudo=true JAXGFV010000002.1 Protein Homology CDS 10854 11469 . - 0 ID=cds-SNF32_01175;Parent=gene-SNF32_01175;Note=frameshifted;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002289751.1;locus_tag=SNF32_01175;product=uridine kinase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 11551 12245 . - . ID=gene-SNF32_01180;Name=SNF32_01180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01180;pseudo=true JAXGFV010000002.1 Protein Homology CDS 11551 12245 . - 0 ID=cds-SNF32_01180;Parent=gene-SNF32_01180;Note=frameshifted;Ontology_term=GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875340.1;locus_tag=SNF32_01180;product=YjjG family noncanonical pyrimidine nucleotidase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 12378 12695 . - . ID=gene-SNF32_01185;Name=SNF32_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01185 JAXGFV010000002.1 GeneMarkS-2+ CDS 12378 12695 . - 0 ID=cds-MDY4306574.1;Parent=gene-SNF32_01185;Dbxref=NCBI_GP:MDY4306574.1;Name=MDY4306574.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_01185;product=hypothetical protein;protein_id=MDY4306574.1;transl_table=11 JAXGFV010000002.1 Genbank gene 12688 12999 . - . ID=gene-SNF32_01190;Name=SNF32_01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01190 JAXGFV010000002.1 Protein Homology CDS 12688 12999 . - 0 ID=cds-MDY4306575.1;Parent=gene-SNF32_01190;Dbxref=NCBI_GP:MDY4306575.1;Name=MDY4306575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722690.1;locus_tag=SNF32_01190;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=MDY4306575.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 13100 13794 . - . ID=gene-SNF32_01195;Name=SNF32_01195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01195;pseudo=true JAXGFV010000002.1 Protein Homology CDS 13100 13794 . - 0 ID=cds-SNF32_01195;Parent=gene-SNF32_01195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875339.1;locus_tag=SNF32_01195;product=16S rRNA pseudouridine(516) synthase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 14115 14721 . + . ID=gene-SNF32_01200;Name=SNF32_01200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01200;pseudo=true JAXGFV010000002.1 Protein Homology CDS 14115 14721 . + 0 ID=cds-SNF32_01200;Parent=gene-SNF32_01200;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0008097,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,5S rRNA binding|0008097||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002331169.1;locus_tag=SNF32_01200;product=50S ribosomal protein L25/general stress protein Ctc;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 15044 15367 . + . ID=gene-SNF32_01205;Name=SNF32_01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01205 JAXGFV010000002.1 Protein Homology CDS 15044 15367 . + 0 ID=cds-MDY4306576.1;Parent=gene-SNF32_01205;Dbxref=NCBI_GP:MDY4306576.1;Name=MDY4306576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010720345.1;locus_tag=SNF32_01205;product=DUF960 domain-containing protein;protein_id=MDY4306576.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 15585 16959 . + . ID=gene-SNF32_01210;Name=SNF32_01210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01210;pseudo=true JAXGFV010000002.1 Protein Homology CDS 15585 16959 . + 0 ID=cds-SNF32_01210;Parent=gene-SNF32_01210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734370.1;locus_tag=SNF32_01210;product=MATE family efflux transporter;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 17004 18299 . - . ID=gene-SNF32_01215;Name=SNF32_01215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01215;pseudo=true JAXGFV010000002.1 Protein Homology CDS 17004 18299 . - 0 ID=cds-SNF32_01215;Parent=gene-SNF32_01215;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734371.1;locus_tag=SNF32_01215;product=hemolysin family protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 18559 18732 . + . ID=gene-SNF32_01220;Name=pepG1;gbkey=Gene;gene=pepG1;gene_biotype=protein_coding;locus_tag=SNF32_01220 JAXGFV010000002.1 Protein Homology CDS 18559 18732 . + 0 ID=cds-MDY4306577.1;Parent=gene-SNF32_01220;Dbxref=NCBI_GP:MDY4306577.1;Name=MDY4306577.1;gbkey=CDS;gene=pepG1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013774385.1;locus_tag=SNF32_01220;product=type I toxin-antitoxin system toxin PepG1;protein_id=MDY4306577.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 18833 20798 . - . ID=gene-SNF32_01225;Name=SNF32_01225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01225;pseudo=true JAXGFV010000002.1 Protein Homology CDS 18833 20798 . - 0 ID=cds-SNF32_01225;Parent=gene-SNF32_01225;Note=frameshifted;Ontology_term=GO:0015079,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015510475.1;locus_tag=SNF32_01225;product=KUP/HAK/KT family potassium transporter;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 20931 21167 . - . ID=gene-SNF32_01230;Name=SNF32_01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01230 JAXGFV010000002.1 Protein Homology CDS 20931 21167 . - 0 ID=cds-MDY4306578.1;Parent=gene-SNF32_01230;Dbxref=NCBI_GP:MDY4306578.1;Name=MDY4306578.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734373.1;locus_tag=SNF32_01230;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=MDY4306578.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 21361 23469 . - . ID=gene-SNF32_01235;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=pseudogene;locus_tag=SNF32_01235;pseudo=true JAXGFV010000002.1 Protein Homology CDS 21361 23469 . - 0 ID=cds-SNF32_01235;Parent=gene-SNF32_01235;Note=frameshifted;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724328.1;locus_tag=SNF32_01235;product=polyribonucleotide nucleotidyltransferase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 23647 23915 . - . ID=gene-SNF32_01240;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=pseudogene;locus_tag=SNF32_01240;pseudo=true JAXGFV010000002.1 Protein Homology CDS 23647 23915 . - 0 ID=cds-SNF32_01240;Parent=gene-SNF32_01240;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_464855.1;locus_tag=SNF32_01240;product=30S ribosomal protein S15;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 24158 24721 . + . ID=gene-SNF32_01245;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=SNF32_01245 JAXGFV010000002.1 Protein Homology CDS 24158 24721 . + 0 ID=cds-MDY4306579.1;Parent=gene-SNF32_01245;Dbxref=NCBI_GP:MDY4306579.1;Name=MDY4306579.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016623744.1;locus_tag=SNF32_01245;product=peptide deformylase;protein_id=MDY4306579.1;transl_table=11 JAXGFV010000002.1 Genbank gene 24991 25329 . - . ID=gene-SNF32_01250;Name=SNF32_01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01250 JAXGFV010000002.1 GeneMarkS-2+ CDS 24991 25329 . - 0 ID=cds-MDY4306580.1;Parent=gene-SNF32_01250;Dbxref=NCBI_GP:MDY4306580.1;Name=MDY4306580.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_01250;product=hypothetical protein;protein_id=MDY4306580.1;transl_table=11 JAXGFV010000002.1 Genbank gene 25650 25850 . - . ID=gene-SNF32_01255;Name=SNF32_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01255 JAXGFV010000002.1 GeneMarkS-2+ CDS 25650 25850 . - 0 ID=cds-MDY4306581.1;Parent=gene-SNF32_01255;Dbxref=NCBI_GP:MDY4306581.1;Name=MDY4306581.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_01255;product=hypothetical protein;protein_id=MDY4306581.1;transl_table=11 JAXGFV010000002.1 Genbank gene 25868 26080 . - . ID=gene-SNF32_01260;Name=SNF32_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01260 JAXGFV010000002.1 GeneMarkS-2+ CDS 25868 26080 . - 0 ID=cds-MDY4306582.1;Parent=gene-SNF32_01260;Dbxref=NCBI_GP:MDY4306582.1;Name=MDY4306582.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_01260;product=hypothetical protein;protein_id=MDY4306582.1;transl_table=11 JAXGFV010000002.1 Genbank gene 26413 27222 . - . ID=gene-SNF32_01265;Name=SNF32_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01265 JAXGFV010000002.1 GeneMarkS-2+ CDS 26413 27222 . - 0 ID=cds-MDY4306583.1;Parent=gene-SNF32_01265;Dbxref=NCBI_GP:MDY4306583.1;Name=MDY4306583.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_01265;product=hypothetical protein;protein_id=MDY4306583.1;transl_table=11 JAXGFV010000002.1 Genbank gene 27445 27621 . - . ID=gene-SNF32_01270;Name=SNF32_01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01270 JAXGFV010000002.1 GeneMarkS-2+ CDS 27445 27621 . - 0 ID=cds-MDY4306584.1;Parent=gene-SNF32_01270;Dbxref=NCBI_GP:MDY4306584.1;Name=MDY4306584.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_01270;product=hypothetical protein;protein_id=MDY4306584.1;transl_table=11 JAXGFV010000002.1 Genbank gene 28139 28702 . - . ID=gene-SNF32_01275;Name=SNF32_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01275 JAXGFV010000002.1 GeneMarkS-2+ CDS 28139 28702 . - 0 ID=cds-MDY4306585.1;Parent=gene-SNF32_01275;Dbxref=NCBI_GP:MDY4306585.1;Name=MDY4306585.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_01275;product=hypothetical protein;protein_id=MDY4306585.1;transl_table=11 JAXGFV010000002.1 Genbank gene 28702 28998 . - . ID=gene-SNF32_01280;Name=SNF32_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01280 JAXGFV010000002.1 GeneMarkS-2+ CDS 28702 28998 . - 0 ID=cds-MDY4306586.1;Parent=gene-SNF32_01280;Dbxref=NCBI_GP:MDY4306586.1;Name=MDY4306586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_01280;product=hypothetical protein;protein_id=MDY4306586.1;transl_table=11 JAXGFV010000002.1 Genbank gene 29261 29788 . - . ID=gene-SNF32_01285;Name=SNF32_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01285 JAXGFV010000002.1 Protein Homology CDS 29261 29788 . - 0 ID=cds-MDY4306587.1;Parent=gene-SNF32_01285;Dbxref=NCBI_GP:MDY4306587.1;Name=MDY4306587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734380.1;locus_tag=SNF32_01285;product=transcription repressor NadR;protein_id=MDY4306587.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 29793 30628 . - . ID=gene-SNF32_01290;Name=SNF32_01290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01290;pseudo=true JAXGFV010000002.1 Protein Homology CDS 29793 30628 . - 0 ID=cds-SNF32_01290;Parent=gene-SNF32_01290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734381.1;locus_tag=SNF32_01290;product=chorismate mutase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 30630 31339 . - . ID=gene-SNF32_01295;Name=SNF32_01295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01295;pseudo=true JAXGFV010000002.1 Protein Homology CDS 30630 31339 . - 0 ID=cds-SNF32_01295;Parent=gene-SNF32_01295;Note=frameshifted;Ontology_term=GO:0034979,GO:0051287,GO:0070403;gbkey=CDS;go_function=NAD-dependent protein deacetylase activity|0034979||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002327537.1;locus_tag=SNF32_01295;product=NAD-dependent protein deacylase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 31515 31811 . + . ID=gene-SNF32_01300;Name=SNF32_01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01300 JAXGFV010000002.1 Protein Homology CDS 31515 31811 . + 0 ID=cds-MDY4306588.1;Parent=gene-SNF32_01300;Dbxref=NCBI_GP:MDY4306588.1;Name=MDY4306588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002339483.1;locus_tag=SNF32_01300;product=hypothetical protein;protein_id=MDY4306588.1;transl_table=11 JAXGFV010000002.1 cmsearch riboswitch 32076 32249 . + . ID=id-JAXGFV010000002.1:32076..32249;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch JAXGFV010000002.1 Genbank pseudogene 32491 34055 . + . ID=gene-SNF32_01305;Name=SNF32_01305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01305;pseudo=true JAXGFV010000002.1 Protein Homology CDS 32491 34055 . + 0 ID=cds-SNF32_01305;Parent=gene-SNF32_01305;Note=The N-terminal region of this protein%2C as described by TIGR01726%2C is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits%2C which specificities that include histidine%2C arginine%2C glutamine%2C glutamate%2C L-cystine (sic)%2C the opines (in Agrobacterium) octopine and nopaline%2C etc.%3B frameshifted;Ontology_term=GO:0015837,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010770108.1;locus_tag=SNF32_01305;product=ABC transporter permease subunit;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 34068 34808 . + . ID=gene-SNF32_01310;Name=SNF32_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01310 JAXGFV010000002.1 Protein Homology CDS 34068 34808 . + 0 ID=cds-MDY4306589.1;Parent=gene-SNF32_01310;Dbxref=NCBI_GP:MDY4306589.1;Name=MDY4306589.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734385.1;locus_tag=SNF32_01310;product=amino acid ABC transporter ATP-binding protein;protein_id=MDY4306589.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 35284 36539 . + . ID=gene-SNF32_01315;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=pseudogene;locus_tag=SNF32_01315;pseudo=true JAXGFV010000002.1 Protein Homology CDS 35284 36539 . + 0 ID=cds-SNF32_01315;Parent=gene-SNF32_01315;Note=frameshifted;Ontology_term=GO:0015803,GO:0015658;gbkey=CDS;gene=brnQ;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: protein motif:HMM:NF017347.3;locus_tag=SNF32_01315;product=branched-chain amino acid transport system II carrier protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 36842 37215 . - . ID=gene-SNF32_01320;Name=SNF32_01320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01320;pseudo=true JAXGFV010000002.1 Protein Homology CDS 36842 37215 . - 0 ID=cds-SNF32_01320;Parent=gene-SNF32_01320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016628819.1;locus_tag=SNF32_01320;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 37346 37815 . - . ID=gene-SNF32_01325;Name=SNF32_01325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01325;pseudo=true JAXGFV010000002.1 Protein Homology CDS 37346 37815 . - 0 ID=cds-SNF32_01325;Parent=gene-SNF32_01325;Note=frameshifted;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734388.1;locus_tag=SNF32_01325;product=low molecular weight protein-tyrosine-phosphatase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 37863 38450 . - . ID=gene-SNF32_01330;Name=SNF32_01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01330 JAXGFV010000002.1 Protein Homology CDS 37863 38450 . - 0 ID=cds-MDY4306590.1;Parent=gene-SNF32_01330;Dbxref=NCBI_GP:MDY4306590.1;Name=MDY4306590.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010750725.1;locus_tag=SNF32_01330;product=TetR/AcrR family transcriptional regulator;protein_id=MDY4306590.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 38514 39514 . - . ID=gene-SNF32_01335;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=pseudogene;locus_tag=SNF32_01335;pseudo=true JAXGFV010000002.1 Protein Homology CDS 38514 39514 . - 0 ID=cds-SNF32_01335;Parent=gene-SNF32_01335;Note=frameshifted;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328650.1;locus_tag=SNF32_01335;product=Holliday junction branch migration DNA helicase RuvB;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 39527 40127 . - . ID=gene-SNF32_01340;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=pseudogene;locus_tag=SNF32_01340;pseudo=true JAXGFV010000002.1 Protein Homology CDS 39527 40127 . - 0 ID=cds-SNF32_01340;Parent=gene-SNF32_01340;Note=frameshifted;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002294251.1;locus_tag=SNF32_01340;product=Holliday junction branch migration protein RuvA;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 40278 42253 . - . ID=gene-SNF32_01345;Name=treP;gbkey=Gene;gene=treP;gene_biotype=pseudogene;locus_tag=SNF32_01345;pseudo=true JAXGFV010000002.1 Protein Homology CDS 40278 42253 . - 0 ID=cds-SNF32_01345;Parent=gene-SNF32_01345;Note=frameshifted;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724171.1;locus_tag=SNF32_01345;product=PTS system trehalose-specific EIIBC component;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 42466 42789 . + . ID=gene-SNF32_01350;Name=SNF32_01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01350 JAXGFV010000002.1 Protein Homology CDS 42466 42789 . + 0 ID=cds-MDY4306591.1;Parent=gene-SNF32_01350;Dbxref=NCBI_GP:MDY4306591.1;Name=MDY4306591.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF012464.3;locus_tag=SNF32_01350;product=recombinase family protein;protein_id=MDY4306591.1;transl_table=11 JAXGFV010000002.1 Genbank gene 43161 43604 . + . ID=gene-SNF32_01355;Name=SNF32_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01355 JAXGFV010000002.1 Protein Homology CDS 43161 43604 . + 0 ID=cds-MDY4306592.1;Parent=gene-SNF32_01355;Dbxref=NCBI_GP:MDY4306592.1;Name=MDY4306592.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF013544.3;locus_tag=SNF32_01355;product=transposase;protein_id=MDY4306592.1;transl_table=11 JAXGFV010000002.1 Genbank gene 43520 43759 . + . ID=gene-SNF32_01360;Name=SNF32_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01360 JAXGFV010000002.1 Protein Homology CDS 43520 43759 . + 0 ID=cds-MDY4306593.1;Parent=gene-SNF32_01360;Dbxref=NCBI_GP:MDY4306593.1;Name=MDY4306593.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013544.3;locus_tag=SNF32_01360;product=transposase;protein_id=MDY4306593.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 44192 44904 . + . ID=gene-SNF32_01365;Name=treR;gbkey=Gene;gene=treR;gene_biotype=pseudogene;locus_tag=SNF32_01365;pseudo=true JAXGFV010000002.1 Protein Homology CDS 44192 44904 . + 0 ID=cds-SNF32_01365;Parent=gene-SNF32_01365;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002372578.1;locus_tag=SNF32_01365;product=trehalose operon repressor;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 45411 45855 . + . ID=gene-SNF32_01370;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=pseudogene;locus_tag=SNF32_01370;pseudo=true JAXGFV010000002.1 Protein Homology CDS 45411 45855 . + 0 ID=cds-SNF32_01370;Parent=gene-SNF32_01370;Note=frameshifted;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: protein motif:HMM:NF013780.3;locus_tag=SNF32_01370;product=peptide-methionine (R)-S-oxide reductase MsrB;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 45979 46922 . - . ID=gene-SNF32_01375;Name=SNF32_01375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01375;pseudo=true JAXGFV010000002.1 Protein Homology CDS 45979 46922 . - 0 ID=cds-SNF32_01375;Parent=gene-SNF32_01375;Note=frameshifted;Ontology_term=GO:0009976;gbkey=CDS;go_function=tocopherol cyclase activity|0009976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005237328.1;locus_tag=SNF32_01375;product=tocopherol cyclase family protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 47095 47658 . - . ID=gene-SNF32_01380;Name=SNF32_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01380 JAXGFV010000002.1 Protein Homology CDS 47095 47658 . - 0 ID=cds-MDY4306594.1;Parent=gene-SNF32_01380;Dbxref=NCBI_GP:MDY4306594.1;Name=MDY4306594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723773.1;locus_tag=SNF32_01380;product=Maf family protein;protein_id=MDY4306594.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 47687 48375 . - . ID=gene-SNF32_01385;Name=SNF32_01385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01385;pseudo=true JAXGFV010000002.1 Protein Homology CDS 47687 48375 . - 0 ID=cds-SNF32_01385;Parent=gene-SNF32_01385;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002398184.1;locus_tag=SNF32_01385;product=DNA mismatch repair endonuclease MutL;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 48656 49790 . - . ID=gene-SNF32_01390;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=pseudogene;locus_tag=SNF32_01390;pseudo=true JAXGFV010000002.1 Protein Homology CDS 48656 49790 . - 0 ID=cds-SNF32_01390;Parent=gene-SNF32_01390;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006298,GO:0016887;gbkey=CDS;gene=mutL;go_function=ATP hydrolysis activity|0016887||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002398184.1;locus_tag=SNF32_01390;product=DNA mismatch repair endonuclease MutL;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 49808 52391 . - . ID=gene-SNF32_01395;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=pseudogene;locus_tag=SNF32_01395;pseudo=true JAXGFV010000002.1 Protein Homology CDS 49808 52391 . - 0 ID=cds-SNF32_01395;Parent=gene-SNF32_01395;Note=frameshifted;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011673584.1;locus_tag=SNF32_01395;product=DNA mismatch repair protein MutS;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 52407 52775 . - . ID=gene-SNF32_01400;Name=SNF32_01400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01400;pseudo=true JAXGFV010000002.1 Protein Homology CDS 52407 52775 . - 0 ID=cds-SNF32_01400;Parent=gene-SNF32_01400;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734400.1;locus_tag=SNF32_01400;product=YlbF family regulator;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 52791 53111 . - . ID=gene-SNF32_01405;Name=SNF32_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01405 JAXGFV010000002.1 Protein Homology CDS 52791 53111 . - 0 ID=cds-MDY4306595.1;Parent=gene-SNF32_01405;Dbxref=NCBI_GP:MDY4306595.1;Name=MDY4306595.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024674.3;locus_tag=SNF32_01405;product=YmdB family metallophosphoesterase;protein_id=MDY4306595.1;transl_table=11 JAXGFV010000002.1 Genbank gene 53096 53245 . - . ID=gene-SNF32_01410;Name=SNF32_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01410 JAXGFV010000002.1 GeneMarkS-2+ CDS 53096 53245 . - 0 ID=cds-MDY4306596.1;Parent=gene-SNF32_01410;Dbxref=NCBI_GP:MDY4306596.1;Name=MDY4306596.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_01410;product=hypothetical protein;protein_id=MDY4306596.1;transl_table=11 JAXGFV010000002.1 Genbank gene 53220 53585 . - . ID=gene-SNF32_01415;Name=SNF32_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01415 JAXGFV010000002.1 Protein Homology CDS 53220 53585 . - 0 ID=cds-MDY4306597.1;Parent=gene-SNF32_01415;Dbxref=NCBI_GP:MDY4306597.1;Name=MDY4306597.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012376.3;locus_tag=SNF32_01415;product=YmdB family metallophosphoesterase;protein_id=MDY4306597.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 53974 54746 . - . ID=gene-SNF32_01420;Name=SNF32_01420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01420;pseudo=true JAXGFV010000002.1 Protein Homology CDS 53974 54746 . - 0 ID=cds-SNF32_01420;Parent=gene-SNF32_01420;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016853152.1;locus_tag=SNF32_01420;product=HAD family hydrolase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 54761 55393 . - . ID=gene-SNF32_01425;Name=SNF32_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01425 JAXGFV010000002.1 Protein Homology CDS 54761 55393 . - 0 ID=cds-MDY4306598.1;Parent=gene-SNF32_01425;Dbxref=NCBI_GP:MDY4306598.1;Name=MDY4306598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002294262.1;locus_tag=SNF32_01425;product=DNA alkylation repair protein;protein_id=MDY4306598.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 55427 56223 . - . ID=gene-SNF32_01430;Name=SNF32_01430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01430;pseudo=true JAXGFV010000002.1 Protein Homology CDS 55427 56223 . - 0 ID=cds-SNF32_01430;Parent=gene-SNF32_01430;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328032.1;locus_tag=SNF32_01430;product=formate/nitrite transporter family protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 56546 57157 . + . ID=gene-SNF32_01435;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=SNF32_01435 JAXGFV010000002.1 Protein Homology CDS 56546 57157 . + 0 ID=cds-MDY4306599.1;Parent=gene-SNF32_01435;Dbxref=NCBI_GP:MDY4306599.1;Name=MDY4306599.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734406.1;locus_tag=SNF32_01435;product=30S ribosomal protein S4;protein_id=MDY4306599.1;transl_table=11 JAXGFV010000002.1 Genbank gene 58147 58689 . + . ID=gene-SNF32_01440;Name=SNF32_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01440 JAXGFV010000002.1 Protein Homology CDS 58147 58689 . + 0 ID=cds-MDY4306600.1;Parent=gene-SNF32_01440;Dbxref=NCBI_GP:MDY4306600.1;Name=MDY4306600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723416.1;locus_tag=SNF32_01440;product=biotin transporter BioY;protein_id=MDY4306600.1;transl_table=11 JAXGFV010000002.1 Genbank gene 58686 58952 . - . ID=gene-SNF32_01445;Name=SNF32_01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01445 JAXGFV010000002.1 GeneMarkS-2+ CDS 58686 58952 . - 0 ID=cds-MDY4306601.1;Parent=gene-SNF32_01445;Dbxref=NCBI_GP:MDY4306601.1;Name=MDY4306601.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_01445;product=hypothetical protein;protein_id=MDY4306601.1;transl_table=11 JAXGFV010000002.1 Genbank gene 58969 59451 . - . ID=gene-SNF32_01450;Name=SNF32_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01450 JAXGFV010000002.1 Protein Homology CDS 58969 59451 . - 0 ID=cds-MDY4306602.1;Parent=gene-SNF32_01450;Dbxref=NCBI_GP:MDY4306602.1;Name=MDY4306602.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017959.3;locus_tag=SNF32_01450;product=DUF998 domain-containing protein;protein_id=MDY4306602.1;transl_table=11 JAXGFV010000002.1 Genbank gene 59480 60241 . - . ID=gene-SNF32_01455;Name=SNF32_01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01455 JAXGFV010000002.1 Protein Homology CDS 59480 60241 . - 0 ID=cds-MDY4306603.1;Parent=gene-SNF32_01455;Dbxref=NCBI_GP:MDY4306603.1;Name=MDY4306603.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002372559.1;locus_tag=SNF32_01455;product=3-oxoacyl-ACP reductase;protein_id=MDY4306603.1;transl_table=11 JAXGFV010000002.1 Genbank gene 60238 60459 . - . ID=gene-SNF32_01460;Name=SNF32_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01460 JAXGFV010000002.1 Protein Homology CDS 60238 60459 . - 0 ID=cds-MDY4306604.1;Parent=gene-SNF32_01460;Dbxref=NCBI_GP:MDY4306604.1;Name=MDY4306604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016186310.1;locus_tag=SNF32_01460;product=DUF2829 domain-containing protein;protein_id=MDY4306604.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 60449 61982 . - . ID=gene-SNF32_01465;Name=SNF32_01465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01465;pseudo=true JAXGFV010000002.1 Protein Homology CDS 60449 61982 . - 0 ID=cds-SNF32_01465;Parent=gene-SNF32_01465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002324286.1;locus_tag=SNF32_01465;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 62404 63138 . + . ID=gene-SNF32_01470;Name=SNF32_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01470 JAXGFV010000002.1 Protein Homology CDS 62404 63138 . + 0 ID=cds-MDY4306605.1;Parent=gene-SNF32_01470;Dbxref=NCBI_GP:MDY4306605.1;Name=MDY4306605.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723412.1;locus_tag=SNF32_01470;product=MIP/aquaporin family protein;protein_id=MDY4306605.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 63754 64646 . - . ID=gene-SNF32_01475;Name=SNF32_01475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01475;pseudo=true JAXGFV010000002.1 Protein Homology CDS 63754 64646 . - 0 ID=cds-SNF32_01475;Parent=gene-SNF32_01475;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002348747.1;locus_tag=SNF32_01475;product=metallophosphoesterase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 64665 65023 . - . ID=gene-SNF32_01480;Name=SNF32_01480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01480;pseudo=true JAXGFV010000002.1 Protein Homology CDS 64665 65023 . - 0 ID=cds-SNF32_01480;Parent=gene-SNF32_01480;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734414.1;locus_tag=SNF32_01480;product=iron-sulfur cluster biosynthesis family protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 65040 65645 . - . ID=gene-SNF32_01485;Name=SNF32_01485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01485;pseudo=true JAXGFV010000002.1 Protein Homology CDS 65040 65645 . - 0 ID=cds-SNF32_01485;Parent=gene-SNF32_01485;Note=frameshifted;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010750753.1;locus_tag=SNF32_01485;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 65863 66158 . + . ID=gene-SNF32_01490;Name=SNF32_01490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01490;pseudo=true JAXGFV010000002.1 Protein Homology CDS 65863 66158 . + 0 ID=cds-SNF32_01490;Parent=gene-SNF32_01490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002315522.1;locus_tag=SNF32_01490;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 66226 66348 . + . ID=gene-SNF32_01495;Name=SNF32_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01495 JAXGFV010000002.1 Protein Homology CDS 66226 66348 . + 0 ID=cds-MDY4306606.1;Parent=gene-SNF32_01495;Dbxref=NCBI_GP:MDY4306606.1;Name=MDY4306606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734417.1;locus_tag=SNF32_01495;product=hypothetical protein;protein_id=MDY4306606.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 66534 67486 . - . ID=gene-SNF32_01500;Name=SNF32_01500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01500;pseudo=true JAXGFV010000002.1 Protein Homology CDS 66534 67486 . - 0 ID=cds-SNF32_01500;Parent=gene-SNF32_01500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016634999.1;locus_tag=SNF32_01500;product=siderophore ABC transporter substrate-binding protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 67508 68261 . - . ID=gene-SNF32_01505;Name=SNF32_01505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01505;pseudo=true JAXGFV010000002.1 Protein Homology CDS 67508 68261 . - 0 ID=cds-SNF32_01505;Parent=gene-SNF32_01505;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002372520.1;locus_tag=SNF32_01505;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 68258 69191 . - . ID=gene-SNF32_01510;Name=SNF32_01510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01510;pseudo=true JAXGFV010000002.1 Protein Homology CDS 68258 69191 . - 0 ID=cds-SNF32_01510;Parent=gene-SNF32_01510;Note=frameshifted;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736817.1;locus_tag=SNF32_01510;product=iron chelate uptake ABC transporter family permease subunit;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 69207 70154 . - . ID=gene-SNF32_01515;Name=SNF32_01515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01515;pseudo=true JAXGFV010000002.1 Protein Homology CDS 69207 70154 . - 0 ID=cds-SNF32_01515;Parent=gene-SNF32_01515;Note=frameshifted;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734421.1;locus_tag=SNF32_01515;product=iron chelate uptake ABC transporter family permease subunit;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 70536 70975 . + . ID=gene-SNF32_01520;Name=SNF32_01520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01520;pseudo=true JAXGFV010000002.1 Protein Homology CDS 70536 70975 . + 0 ID=cds-SNF32_01520;Parent=gene-SNF32_01520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734422.1;locus_tag=SNF32_01520;product=YueI family protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 71116 73398 . - . ID=gene-SNF32_01525;Name=gshAB;gbkey=Gene;gene=gshAB;gene_biotype=pseudogene;locus_tag=SNF32_01525;pseudo=true JAXGFV010000002.1 Protein Homology CDS 71116 73398 . - 0 ID=cds-SNF32_01525;Parent=gene-SNF32_01525;Note=frameshifted;Ontology_term=GO:0006750,GO:0004357,GO:0005524,GO:0046872;gbkey=CDS;gene=gshAB;go_function=glutamate-cysteine ligase activity|0004357||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734423.1;locus_tag=SNF32_01525;product=bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 73795 74786 . - . ID=gene-SNF32_01530;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=pseudogene;locus_tag=SNF32_01530;pseudo=true JAXGFV010000002.1 Protein Homology CDS 73795 74786 . - 0 ID=cds-SNF32_01530;Parent=gene-SNF32_01530;Note=frameshifted;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016183614.1;locus_tag=SNF32_01530;product=signal recognition particle-docking protein FtsY;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 74804 75612 . - . ID=gene-SNF32_01535;Name=SNF32_01535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01535;pseudo=true JAXGFV010000002.1 Protein Homology CDS 74804 75612 . - 0 ID=cds-SNF32_01535;Parent=gene-SNF32_01535;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734425.1;locus_tag=SNF32_01535;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 75621 79197 . - . ID=gene-SNF32_01540;Name=smc;gbkey=Gene;gene=smc;gene_biotype=pseudogene;locus_tag=SNF32_01540;pseudo=true JAXGFV010000002.1 Protein Homology CDS 75621 79197 . - 0 ID=cds-SNF32_01540;Parent=gene-SNF32_01540;Note=frameshifted;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287897.1;locus_tag=SNF32_01540;product=chromosome segregation protein SMC;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 79210 79900 . - . ID=gene-SNF32_01545;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=pseudogene;locus_tag=SNF32_01545;pseudo=true JAXGFV010000002.1 Protein Homology CDS 79210 79900 . - 0 ID=cds-SNF32_01545;Parent=gene-SNF32_01545;Note=frameshifted;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734427.1;locus_tag=SNF32_01545;product=ribonuclease III;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 80971 81207 . - . ID=gene-SNF32_01550;Name=SNF32_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01550 JAXGFV010000002.1 Protein Homology CDS 80971 81207 . - 0 ID=cds-MDY4306607.1;Parent=gene-SNF32_01550;Dbxref=NCBI_GP:MDY4306607.1;Name=MDY4306607.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF013540.3;locus_tag=SNF32_01550;product=helix-turn-helix transcriptional regulator;protein_id=MDY4306607.1;transl_table=11 JAXGFV010000002.1 Genbank gene 81639 81803 . + . ID=gene-SNF32_01555;Name=SNF32_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01555 JAXGFV010000002.1 GeneMarkS-2+ CDS 81639 81803 . + 0 ID=cds-MDY4306608.1;Parent=gene-SNF32_01555;Dbxref=NCBI_GP:MDY4306608.1;Name=MDY4306608.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_01555;product=hypothetical protein;protein_id=MDY4306608.1;transl_table=11 JAXGFV010000002.1 Genbank gene 81803 82312 . + . ID=gene-SNF32_01560;Name=SNF32_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01560 JAXGFV010000002.1 GeneMarkS-2+ CDS 81803 82312 . + 0 ID=cds-MDY4306609.1;Parent=gene-SNF32_01560;Dbxref=NCBI_GP:MDY4306609.1;Name=MDY4306609.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_01560;product=hypothetical protein;protein_id=MDY4306609.1;transl_table=11 JAXGFV010000002.1 Genbank gene 82299 82478 . + . ID=gene-SNF32_01565;Name=SNF32_01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01565 JAXGFV010000002.1 GeneMarkS-2+ CDS 82299 82478 . + 0 ID=cds-MDY4306610.1;Parent=gene-SNF32_01565;Dbxref=NCBI_GP:MDY4306610.1;Name=MDY4306610.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_01565;product=hypothetical protein;protein_id=MDY4306610.1;transl_table=11 JAXGFV010000002.1 Genbank gene 82919 83542 . - . ID=gene-SNF32_01570;Name=SNF32_01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01570 JAXGFV010000002.1 Protein Homology CDS 82919 83542 . - 0 ID=cds-MDY4306611.1;Parent=gene-SNF32_01570;Dbxref=NCBI_GP:MDY4306611.1;Name=MDY4306611.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010750769.1;locus_tag=SNF32_01570;product=ATP-binding cassette domain-containing protein;protein_id=MDY4306611.1;transl_table=11 JAXGFV010000002.1 Genbank gene 83535 84035 . - . ID=gene-SNF32_01575;Name=SNF32_01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01575 JAXGFV010000002.1 Protein Homology CDS 83535 84035 . - 0 ID=cds-MDY4306612.1;Parent=gene-SNF32_01575;Dbxref=NCBI_GP:MDY4306612.1;Name=MDY4306612.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018897.3;locus_tag=SNF32_01575;product=DUF1430 domain-containing protein;protein_id=MDY4306612.1;transl_table=11 JAXGFV010000002.1 Genbank gene 84032 84235 . - . ID=gene-SNF32_01580;Name=SNF32_01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01580 JAXGFV010000002.1 GeneMarkS-2+ CDS 84032 84235 . - 0 ID=cds-MDY4306613.1;Parent=gene-SNF32_01580;Dbxref=NCBI_GP:MDY4306613.1;Name=MDY4306613.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_01580;product=hypothetical protein;protein_id=MDY4306613.1;transl_table=11 JAXGFV010000002.1 Genbank gene 84408 85163 . - . ID=gene-SNF32_01585;Name=SNF32_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01585 JAXGFV010000002.1 GeneMarkS-2+ CDS 84408 85163 . - 0 ID=cds-MDY4306614.1;Parent=gene-SNF32_01585;Dbxref=NCBI_GP:MDY4306614.1;Name=MDY4306614.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_01585;product=hypothetical protein;protein_id=MDY4306614.1;transl_table=11 JAXGFV010000002.1 Genbank gene 85667 86050 . - . ID=gene-SNF32_01590;Name=SNF32_01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01590 JAXGFV010000002.1 Protein Homology CDS 85667 86050 . - 0 ID=cds-MDY4306615.1;Parent=gene-SNF32_01590;Dbxref=NCBI_GP:MDY4306615.1;Name=MDY4306615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002313941.1;locus_tag=SNF32_01590;product=hypothetical protein;protein_id=MDY4306615.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 86357 88136 . - . ID=gene-SNF32_01595;Name=SNF32_01595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01595;pseudo=true JAXGFV010000002.1 Protein Homology CDS 86357 88136 . - 0 ID=cds-SNF32_01595;Parent=gene-SNF32_01595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008265999.1;locus_tag=SNF32_01595;product=oligopeptide ABC transporter substrate-binding protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 88162 89073 . - . ID=gene-SNF32_01600;Name=SNF32_01600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01600;pseudo=true JAXGFV010000002.1 Protein Homology CDS 88162 89073 . - 0 ID=cds-SNF32_01600;Parent=gene-SNF32_01600;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287893.1;locus_tag=SNF32_01600;product=ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 89101 90062 . - . ID=gene-SNF32_01605;Name=opp4B;gbkey=Gene;gene=opp4B;gene_biotype=pseudogene;locus_tag=SNF32_01605;pseudo=true JAXGFV010000002.1 Protein Homology CDS 89101 90062 . - 0 ID=cds-SNF32_01605;Parent=gene-SNF32_01605;Note=frameshifted;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp4B;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010750774.1;locus_tag=SNF32_01605;product=oligopeptide ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 90062 91003 . - . ID=gene-SNF32_01610;Name=SNF32_01610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01610;pseudo=true JAXGFV010000002.1 Protein Homology CDS 90062 91003 . - 0 ID=cds-SNF32_01610;Parent=gene-SNF32_01610;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002297777.1;locus_tag=SNF32_01610;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 91004 92007 . - . ID=gene-SNF32_01615;Name=SNF32_01615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01615;pseudo=true JAXGFV010000002.1 Protein Homology CDS 91004 92007 . - 0 ID=cds-SNF32_01615;Parent=gene-SNF32_01615;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736807.1;locus_tag=SNF32_01615;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 92588 92830 . - . ID=gene-SNF32_01620;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=SNF32_01620 JAXGFV010000002.1 Protein Homology CDS 92588 92830 . - 0 ID=cds-MDY4306616.1;Parent=gene-SNF32_01620;Dbxref=NCBI_GP:MDY4306616.1;Name=MDY4306616.1;Ontology_term=GO:0006633,GO:0000036;gbkey=CDS;gene=acpP;go_function=acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002294295.1;locus_tag=SNF32_01620;product=acyl carrier protein;protein_id=MDY4306616.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 92932 93945 . - . ID=gene-SNF32_01625;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=pseudogene;locus_tag=SNF32_01625;pseudo=true JAXGFV010000002.1 Protein Homology CDS 92932 93945 . - 0 ID=cds-SNF32_01625;Parent=gene-SNF32_01625;Note=internal stop;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: protein motif:HMM:NF014554.3;locus_tag=SNF32_01625;product=phosphate acyltransferase PlsX;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 93992 96024 . - . ID=gene-SNF32_01630;Name=recG;gbkey=Gene;gene=recG;gene_biotype=pseudogene;locus_tag=SNF32_01630;pseudo=true JAXGFV010000002.1 Protein Homology CDS 93992 96024 . - 0 ID=cds-SNF32_01630;Parent=gene-SNF32_01630;Note=frameshifted;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002290466.1;locus_tag=SNF32_01630;product=ATP-dependent DNA helicase RecG;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 96133 97811 . - . ID=gene-SNF32_01635;Name=SNF32_01635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01635;pseudo=true JAXGFV010000002.1 Protein Homology CDS 96133 97811 . - 0 ID=cds-SNF32_01635;Parent=gene-SNF32_01635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629817.1;locus_tag=SNF32_01635;product=DAK2 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 97863 98225 . - . ID=gene-SNF32_01640;Name=SNF32_01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01640 JAXGFV010000002.1 Protein Homology CDS 97863 98225 . - 0 ID=cds-MDY4306617.1;Parent=gene-SNF32_01640;Dbxref=NCBI_GP:MDY4306617.1;Name=MDY4306617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354933.1;locus_tag=SNF32_01640;product=Asp23/Gls24 family envelope stress response protein;protein_id=MDY4306617.1;transl_table=11 JAXGFV010000002.1 Genbank gene 98495 98683 . + . ID=gene-SNF32_01645;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=SNF32_01645 JAXGFV010000002.1 Protein Homology CDS 98495 98683 . + 0 ID=cds-MDY4306618.1;Parent=gene-SNF32_01645;Dbxref=NCBI_GP:MDY4306618.1;Name=MDY4306618.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008536053.1;locus_tag=SNF32_01645;product=50S ribosomal protein L28;protein_id=MDY4306618.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 99211 101796 . + . ID=gene-SNF32_01650;Name=SNF32_01650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01650;pseudo=true JAXGFV010000002.1 Protein Homology CDS 99211 101796 . + 0 ID=cds-SNF32_01650;Parent=gene-SNF32_01650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021126.3;locus_tag=SNF32_01650;product=YfhO family protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 101839 102582 . - . ID=gene-SNF32_01655;Name=truA;gbkey=Gene;gene=truA;gene_biotype=pseudogene;locus_tag=SNF32_01655;pseudo=true JAXGFV010000002.1 Protein Homology CDS 101839 102582 . - 0 ID=cds-SNF32_01655;Parent=gene-SNF32_01655;Note=frameshifted;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002298563.1;locus_tag=SNF32_01655;product=tRNA pseudouridine(38-40) synthase TruA;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 102618 103412 . - . ID=gene-SNF32_01660;Name=SNF32_01660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01660;pseudo=true JAXGFV010000002.1 Protein Homology CDS 102618 103412 . - 0 ID=cds-SNF32_01660;Parent=gene-SNF32_01660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177190.1;locus_tag=SNF32_01660;product=energy-coupling factor transporter transmembrane protein EcfT;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 103402 103980 . - . ID=gene-SNF32_01665;Name=SNF32_01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01665 JAXGFV010000002.1 Protein Homology CDS 103402 103980 . - 0 ID=cds-MDY4306619.1;Parent=gene-SNF32_01665;Dbxref=NCBI_GP:MDY4306619.1;Name=MDY4306619.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.3;locus_tag=SNF32_01665;product=ATP-binding cassette domain-containing protein;protein_id=MDY4306619.1;transl_table=11 JAXGFV010000002.1 Genbank gene 103923 104186 . - . ID=gene-SNF32_01670;Name=SNF32_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01670 JAXGFV010000002.1 Protein Homology CDS 103923 104186 . - 0 ID=cds-MDY4306620.1;Parent=gene-SNF32_01670;Dbxref=NCBI_GP:MDY4306620.1;Name=MDY4306620.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.3;locus_tag=SNF32_01670;product=ATP-binding cassette domain-containing protein;protein_id=MDY4306620.1;transl_table=11 JAXGFV010000002.1 Genbank gene 104197 105084 . - . ID=gene-SNF32_01675;Name=SNF32_01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01675 JAXGFV010000002.1 Protein Homology CDS 104197 105084 . - 0 ID=cds-MDY4306621.1;Parent=gene-SNF32_01675;Dbxref=NCBI_GP:MDY4306621.1;Name=MDY4306621.1;Ontology_term=GO:0055085,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177188.1;locus_tag=SNF32_01675;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=MDY4306621.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 105350 105729 . - . ID=gene-SNF32_01680;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=pseudogene;locus_tag=SNF32_01680;pseudo=true JAXGFV010000002.1 Protein Homology CDS 105350 105729 . - 0 ID=cds-SNF32_01680;Parent=gene-SNF32_01680;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013773093.1;locus_tag=SNF32_01680;product=50S ribosomal protein L17;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 105756 106693 . - . ID=gene-SNF32_01685;Name=SNF32_01685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01685;pseudo=true JAXGFV010000002.1 Protein Homology CDS 105756 106693 . - 0 ID=cds-SNF32_01685;Parent=gene-SNF32_01685;Note=frameshifted;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010774253.1;locus_tag=SNF32_01685;product=DNA-directed RNA polymerase subunit alpha;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 106773 107146 . - . ID=gene-SNF32_01690;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=pseudogene;locus_tag=SNF32_01690;pseudo=true JAXGFV010000002.1 Protein Homology CDS 106773 107146 . - 0 ID=cds-SNF32_01690;Parent=gene-SNF32_01690;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262610.1;locus_tag=SNF32_01690;product=30S ribosomal protein S11;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 107181 107552 . - . ID=gene-SNF32_01695;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=SNF32_01695 JAXGFV010000002.1 Protein Homology CDS 107181 107552 . - 0 ID=cds-MDY4306622.1;Parent=gene-SNF32_01695;Dbxref=NCBI_GP:MDY4306622.1;Name=MDY4306622.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014834363.1;locus_tag=SNF32_01695;product=30S ribosomal protein S13;protein_id=MDY4306622.1;transl_table=11 JAXGFV010000002.1 Genbank gene 107570 107686 . - . ID=gene-SNF32_01700;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=SNF32_01700 JAXGFV010000002.1 Protein Homology CDS 107570 107686 . - 0 ID=cds-MDY4306623.1;Parent=gene-SNF32_01700;Dbxref=NCBI_GP:MDY4306623.1;Name=MDY4306623.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmJ;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1;locus_tag=SNF32_01700;product=50S ribosomal protein L36;protein_id=MDY4306623.1;transl_table=11 JAXGFV010000002.1 Genbank gene 107719 107937 . - . ID=gene-SNF32_01705;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=SNF32_01705 JAXGFV010000002.1 Protein Homology CDS 107719 107937 . - 0 ID=cds-MDY4306624.1;Parent=gene-SNF32_01705;Dbxref=NCBI_GP:MDY4306624.1;Name=MDY4306624.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720929.1;locus_tag=SNF32_01705;product=translation initiation factor IF-1;protein_id=MDY4306624.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 108099 108772 . - . ID=gene-SNF32_01710;Name=SNF32_01710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01710;pseudo=true JAXGFV010000002.1 Protein Homology CDS 108099 108772 . - 0 ID=cds-SNF32_01710;Parent=gene-SNF32_01710;Note=frameshifted;Ontology_term=GO:0006139,GO:0005524,GO:0016776,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016623850.1;locus_tag=SNF32_01710;product=adenylate kinase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 108832 110125 . - . ID=gene-SNF32_01715;Name=secY;gbkey=Gene;gene=secY;gene_biotype=pseudogene;locus_tag=SNF32_01715;pseudo=true JAXGFV010000002.1 Protein Homology CDS 108832 110125 . - 0 ID=cds-SNF32_01715;Parent=gene-SNF32_01715;Note=frameshifted;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secY;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002345495.1;locus_tag=SNF32_01715;product=preprotein translocase subunit SecY;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 110125 110565 . - . ID=gene-SNF32_01720;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=SNF32_01720 JAXGFV010000002.1 Protein Homology CDS 110125 110565 . - 0 ID=cds-MDY4306625.1;Parent=gene-SNF32_01720;Dbxref=NCBI_GP:MDY4306625.1;Name=MDY4306625.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005592004.1;locus_tag=SNF32_01720;product=50S ribosomal protein L15;protein_id=MDY4306625.1;transl_table=11 JAXGFV010000002.1 Genbank gene 110614 110793 . - . ID=gene-SNF32_01725;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=SNF32_01725 JAXGFV010000002.1 Protein Homology CDS 110614 110793 . - 0 ID=cds-MDY4306626.1;Parent=gene-SNF32_01725;Dbxref=NCBI_GP:MDY4306626.1;Name=MDY4306626.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002356220.1;locus_tag=SNF32_01725;product=50S ribosomal protein L30;protein_id=MDY4306626.1;transl_table=11 JAXGFV010000002.1 Genbank gene 110808 111308 . - . ID=gene-SNF32_01730;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=SNF32_01730 JAXGFV010000002.1 Protein Homology CDS 110808 111308 . - 0 ID=cds-MDY4306627.1;Parent=gene-SNF32_01730;Dbxref=NCBI_GP:MDY4306627.1;Name=MDY4306627.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002288681.1;locus_tag=SNF32_01730;product=30S ribosomal protein S5;protein_id=MDY4306627.1;transl_table=11 JAXGFV010000002.1 Genbank gene 111329 111685 . - . ID=gene-SNF32_01735;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=SNF32_01735 JAXGFV010000002.1 Protein Homology CDS 111329 111685 . - 0 ID=cds-MDY4306628.1;Parent=gene-SNF32_01735;Dbxref=NCBI_GP:MDY4306628.1;Name=MDY4306628.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014125626.1;locus_tag=SNF32_01735;product=50S ribosomal protein L18;protein_id=MDY4306628.1;transl_table=11 JAXGFV010000002.1 Genbank gene 111849 112385 . - . ID=gene-SNF32_01740;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=SNF32_01740 JAXGFV010000002.1 Protein Homology CDS 111849 112385 . - 0 ID=cds-MDY4306629.1;Parent=gene-SNF32_01740;Dbxref=NCBI_GP:MDY4306629.1;Name=MDY4306629.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016250300.1;locus_tag=SNF32_01740;product=50S ribosomal protein L6;protein_id=MDY4306629.1;transl_table=11 JAXGFV010000002.1 Genbank gene 112417 112815 . - . ID=gene-SNF32_01745;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=SNF32_01745 JAXGFV010000002.1 Protein Homology CDS 112417 112815 . - 0 ID=cds-MDY4306630.1;Parent=gene-SNF32_01745;Dbxref=NCBI_GP:MDY4306630.1;Name=MDY4306630.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010742763.1;locus_tag=SNF32_01745;product=30S ribosomal protein S8;protein_id=MDY4306630.1;transl_table=11 JAXGFV010000002.1 Genbank gene 112851 113021 . - . ID=gene-SNF32_01750;Name=SNF32_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01750 JAXGFV010000002.1 Protein Homology CDS 112851 113021 . - 0 ID=cds-MDY4306631.1;Parent=gene-SNF32_01750;Dbxref=NCBI_GP:MDY4306631.1;Name=MDY4306631.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1;locus_tag=SNF32_01750;product=type Z 30S ribosomal protein S14;protein_id=MDY4306631.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 113054 113592 . - . ID=gene-SNF32_01755;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=pseudogene;locus_tag=SNF32_01755;pseudo=true JAXGFV010000002.1 Protein Homology CDS 113054 113592 . - 0 ID=cds-SNF32_01755;Parent=gene-SNF32_01755;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500967.1;locus_tag=SNF32_01755;product=50S ribosomal protein L5;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 113621 113927 . - . ID=gene-SNF32_01760;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=pseudogene;locus_tag=SNF32_01760;pseudo=true JAXGFV010000002.1 Protein Homology CDS 113621 113927 . - 0 ID=cds-SNF32_01760;Parent=gene-SNF32_01760;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002356212.1;locus_tag=SNF32_01760;product=50S ribosomal protein L24;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 113964 114332 . - . ID=gene-SNF32_01765;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=SNF32_01765 JAXGFV010000002.1 Protein Homology CDS 113964 114332 . - 0 ID=cds-MDY4306632.1;Parent=gene-SNF32_01765;Dbxref=NCBI_GP:MDY4306632.1;Name=MDY4306632.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1;locus_tag=SNF32_01765;product=50S ribosomal protein L14;protein_id=MDY4306632.1;transl_table=11 JAXGFV010000002.1 Genbank gene 114390 114656 . - . ID=gene-SNF32_01770;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=SNF32_01770 JAXGFV010000002.1 Protein Homology CDS 114390 114656 . - 0 ID=cds-MDY4306633.1;Parent=gene-SNF32_01770;Dbxref=NCBI_GP:MDY4306633.1;Name=MDY4306633.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016184196.1;locus_tag=SNF32_01770;product=30S ribosomal protein S17;protein_id=MDY4306633.1;transl_table=11 JAXGFV010000002.1 Genbank gene 114681 114869 . - . ID=gene-SNF32_01775;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=SNF32_01775 JAXGFV010000002.1 Protein Homology CDS 114681 114869 . - 0 ID=cds-MDY4306634.1;Parent=gene-SNF32_01775;Dbxref=NCBI_GP:MDY4306634.1;Name=MDY4306634.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002288664.1;locus_tag=SNF32_01775;product=50S ribosomal protein L29;protein_id=MDY4306634.1;transl_table=11 JAXGFV010000002.1 Genbank gene 114859 115293 . - . ID=gene-SNF32_01780;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=SNF32_01780 JAXGFV010000002.1 Protein Homology CDS 114859 115293 . - 0 ID=cds-MDY4306635.1;Parent=gene-SNF32_01780;Dbxref=NCBI_GP:MDY4306635.1;Name=MDY4306635.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011375443.1;locus_tag=SNF32_01780;product=50S ribosomal protein L16;protein_id=MDY4306635.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 115280 115949 . - . ID=gene-SNF32_01785;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=pseudogene;locus_tag=SNF32_01785;pseudo=true JAXGFV010000002.1 Protein Homology CDS 115280 115949 . - 0 ID=cds-SNF32_01785;Parent=gene-SNF32_01785;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002319680.1;locus_tag=SNF32_01785;product=30S ribosomal protein S3;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 115963 116309 . - . ID=gene-SNF32_01790;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=pseudogene;locus_tag=SNF32_01790;pseudo=true JAXGFV010000002.1 Protein Homology CDS 115963 116309 . - 0 ID=cds-SNF32_01790;Parent=gene-SNF32_01790;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018371349.1;locus_tag=SNF32_01790;product=50S ribosomal protein L22;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 116332 116610 . - . ID=gene-SNF32_01795;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=SNF32_01795 JAXGFV010000002.1 Protein Homology CDS 116332 116610 . - 0 ID=cds-MDY4306636.1;Parent=gene-SNF32_01795;Dbxref=NCBI_GP:MDY4306636.1;Name=MDY4306636.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533765.1;locus_tag=SNF32_01795;product=30S ribosomal protein S19;protein_id=MDY4306636.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 116653 117482 . - . ID=gene-SNF32_01800;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=pseudogene;locus_tag=SNF32_01800;pseudo=true JAXGFV010000002.1 Protein Homology CDS 116653 117482 . - 0 ID=cds-SNF32_01800;Parent=gene-SNF32_01800;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002356204.1;locus_tag=SNF32_01800;product=50S ribosomal protein L2;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 117521 117810 . - . ID=gene-SNF32_01805;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=pseudogene;locus_tag=SNF32_01805;pseudo=true JAXGFV010000002.1 Protein Homology CDS 117521 117810 . - 0 ID=cds-SNF32_01805;Parent=gene-SNF32_01805;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002290449.1;locus_tag=SNF32_01805;product=50S ribosomal protein L23;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 117810 118433 . - . ID=gene-SNF32_01810;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=SNF32_01810 JAXGFV010000002.1 Protein Homology CDS 117810 118433 . - 0 ID=cds-MDY4306637.1;Parent=gene-SNF32_01810;Dbxref=NCBI_GP:MDY4306637.1;Name=MDY4306637.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002356200.1;locus_tag=SNF32_01810;product=50S ribosomal protein L4;protein_id=MDY4306637.1;transl_table=11 JAXGFV010000002.1 Genbank gene 118461 119090 . - . ID=gene-SNF32_01815;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=SNF32_01815 JAXGFV010000002.1 Protein Homology CDS 118461 119090 . - 0 ID=cds-MDY4306638.1;Parent=gene-SNF32_01815;Dbxref=NCBI_GP:MDY4306638.1;Name=MDY4306638.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002351833.1;locus_tag=SNF32_01815;product=50S ribosomal protein L3;protein_id=MDY4306638.1;transl_table=11 JAXGFV010000002.1 Genbank gene 119122 119430 . - . ID=gene-SNF32_01820;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=SNF32_01820 JAXGFV010000002.1 Protein Homology CDS 119122 119430 . - 0 ID=cds-MDY4306639.1;Parent=gene-SNF32_01820;Dbxref=NCBI_GP:MDY4306639.1;Name=MDY4306639.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003046044.1;locus_tag=SNF32_01820;product=30S ribosomal protein S10;protein_id=MDY4306639.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 119926 121112 . - . ID=gene-SNF32_01825;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=SNF32_01825;pseudo=true JAXGFV010000002.1 Protein Homology CDS 119926 121112 . - 0 ID=cds-SNF32_01825;Parent=gene-SNF32_01825;Note=frameshifted;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003127959.1;locus_tag=SNF32_01825;product=elongation factor Tu;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 121284 123368 . - . ID=gene-SNF32_01830;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=SNF32_01830 JAXGFV010000002.1 Protein Homology CDS 121284 123368 . - 0 ID=cds-MDY4306640.1;Parent=gene-SNF32_01830;Dbxref=NCBI_GP:MDY4306640.1;Name=MDY4306640.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010720460.1;locus_tag=SNF32_01830;product=elongation factor G;protein_id=MDY4306640.1;transl_table=11 JAXGFV010000002.1 Genbank gene 123447 123917 . - . ID=gene-SNF32_01835;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=SNF32_01835 JAXGFV010000002.1 Protein Homology CDS 123447 123917 . - 0 ID=cds-MDY4306641.1;Parent=gene-SNF32_01835;Dbxref=NCBI_GP:MDY4306641.1;Name=MDY4306641.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010720461.1;locus_tag=SNF32_01835;product=30S ribosomal protein S7;protein_id=MDY4306641.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 124009 124421 . - . ID=gene-SNF32_01840;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=pseudogene;locus_tag=SNF32_01840;pseudo=true JAXGFV010000002.1 Protein Homology CDS 124009 124421 . - 0 ID=cds-SNF32_01840;Parent=gene-SNF32_01840;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002356190.1;locus_tag=SNF32_01840;product=30S ribosomal protein S12;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 124726 125407 . + . ID=gene-SNF32_01845;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=pseudogene;locus_tag=SNF32_01845;pseudo=true JAXGFV010000002.1 Protein Homology CDS 124726 125407 . + 0 ID=cds-SNF32_01845;Parent=gene-SNF32_01845;Note=frameshifted;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002341939.1;locus_tag=SNF32_01845;product=ribose-5-phosphate isomerase RpiA;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 125517 126097 . + . ID=gene-SNF32_01850;Name=SNF32_01850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01850;pseudo=true JAXGFV010000002.1 Protein Homology CDS 125517 126097 . + 0 ID=cds-SNF32_01850;Parent=gene-SNF32_01850;Note=frameshifted;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002396698.1;locus_tag=SNF32_01850;product=recombinase family protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 126373 127064 . + . ID=gene-SNF32_01855;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=pseudogene;locus_tag=SNF32_01855;pseudo=true JAXGFV010000002.1 Protein Homology CDS 126373 127064 . + 0 ID=cds-SNF32_01855;Parent=gene-SNF32_01855;Note=frameshifted;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734478.1;locus_tag=SNF32_01855;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 127431 127598 . - . ID=gene-SNF32_01860;Name=SNF32_01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01860 JAXGFV010000002.1 Protein Homology CDS 127431 127598 . - 0 ID=cds-MDY4306642.1;Parent=gene-SNF32_01860;Dbxref=NCBI_GP:MDY4306642.1;Name=MDY4306642.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.3;locus_tag=SNF32_01860;product=LuxR C-terminal-related transcriptional regulator;protein_id=MDY4306642.1;transl_table=11 JAXGFV010000002.1 Genbank gene 127629 127814 . - . ID=gene-SNF32_01865;Name=SNF32_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01865 JAXGFV010000002.1 GeneMarkS-2+ CDS 127629 127814 . - 0 ID=cds-MDY4306643.1;Parent=gene-SNF32_01865;Dbxref=NCBI_GP:MDY4306643.1;Name=MDY4306643.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_01865;product=hypothetical protein;protein_id=MDY4306643.1;transl_table=11 JAXGFV010000002.1 Genbank gene 128861 129133 . + . ID=gene-SNF32_01870;Name=SNF32_01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01870 JAXGFV010000002.1 GeneMarkS-2+ CDS 128861 129133 . + 0 ID=cds-MDY4306644.1;Parent=gene-SNF32_01870;Dbxref=NCBI_GP:MDY4306644.1;Name=MDY4306644.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_01870;product=hypothetical protein;protein_id=MDY4306644.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 130482 131188 . - . ID=gene-SNF32_01875;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=pseudogene;locus_tag=SNF32_01875;pseudo=true JAXGFV010000002.1 Protein Homology CDS 130482 131188 . - 0 ID=cds-SNF32_01875;Parent=gene-SNF32_01875;Note=frameshifted;Ontology_term=GO:0043096,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=purine nucleobase salvage|0043096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002319340.1;locus_tag=SNF32_01875;product=purine-nucleoside phosphorylase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 131212 132026 . - . ID=gene-SNF32_01880;Name=SNF32_01880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01880;pseudo=true JAXGFV010000002.1 Protein Homology CDS 131212 132026 . - 0 ID=cds-SNF32_01880;Parent=gene-SNF32_01880;Note=frameshifted;Ontology_term=GO:0009116,GO:0004731;gbkey=CDS;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734482.1;locus_tag=SNF32_01880;product=purine-nucleoside phosphorylase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 132111 133277 . - . ID=gene-SNF32_01885;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=SNF32_01885 JAXGFV010000002.1 Protein Homology CDS 132111 133277 . - 0 ID=cds-MDY4306645.1;Parent=gene-SNF32_01885;Dbxref=NCBI_GP:MDY4306645.1;Name=MDY4306645.1;Ontology_term=GO:0006139,GO:0008973;gbkey=CDS;gene=deoB;go_function=phosphopentomutase activity|0008973||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002301034.1;locus_tag=SNF32_01885;product=phosphopentomutase;protein_id=MDY4306645.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 133372 134327 . - . ID=gene-SNF32_01890;Name=SNF32_01890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01890;pseudo=true JAXGFV010000002.1 Protein Homology CDS 133372 134327 . - 0 ID=cds-SNF32_01890;Parent=gene-SNF32_01890;Note=frameshifted;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005880836.1;locus_tag=SNF32_01890;product=ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 134327 135457 . - . ID=gene-SNF32_01895;Name=SNF32_01895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01895;pseudo=true JAXGFV010000002.1 Protein Homology CDS 134327 135457 . - 0 ID=cds-SNF32_01895;Parent=gene-SNF32_01895;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005880838.1;locus_tag=SNF32_01895;product=ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 135450 137010 . - . ID=gene-SNF32_01900;Name=SNF32_01900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01900;pseudo=true JAXGFV010000002.1 Protein Homology CDS 135450 137010 . - 0 ID=cds-SNF32_01900;Parent=gene-SNF32_01900;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005880840.1;locus_tag=SNF32_01900;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 137314 138339 . - . ID=gene-SNF32_01905;Name=SNF32_01905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01905;pseudo=true JAXGFV010000002.1 Protein Homology CDS 137314 138339 . - 0 ID=cds-SNF32_01905;Parent=gene-SNF32_01905;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002324275.1;locus_tag=SNF32_01905;product=BMP family ABC transporter substrate-binding protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 138402 138799 . - . ID=gene-SNF32_01910;Name=SNF32_01910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01910;pseudo=true JAXGFV010000002.1 Protein Homology CDS 138402 138799 . - 0 ID=cds-SNF32_01910;Parent=gene-SNF32_01910;Note=frameshifted;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002291109.1;locus_tag=SNF32_01910;product=cytidine deaminase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 138818 139478 . - . ID=gene-SNF32_01915;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=pseudogene;locus_tag=SNF32_01915;pseudo=true JAXGFV010000002.1 Protein Homology CDS 138818 139478 . - 0 ID=cds-SNF32_01915;Parent=gene-SNF32_01915;Note=frameshifted;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005880846.1;locus_tag=SNF32_01915;product=deoxyribose-phosphate aldolase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 139492 140790 . - . ID=gene-SNF32_01920;Name=SNF32_01920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01920;pseudo=true JAXGFV010000002.1 Protein Homology CDS 139492 140790 . - 0 ID=cds-SNF32_01920;Parent=gene-SNF32_01920;Note=frameshifted;Ontology_term=GO:0006213,GO:0016154;gbkey=CDS;go_function=pyrimidine-nucleoside phosphorylase activity|0016154||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724048.1;locus_tag=SNF32_01920;product=pyrimidine-nucleoside phosphorylase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 140931 141946 . - . ID=gene-SNF32_01925;Name=SNF32_01925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01925;pseudo=true JAXGFV010000002.1 Protein Homology CDS 140931 141946 . - 0 ID=cds-SNF32_01925;Parent=gene-SNF32_01925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734491.1;locus_tag=SNF32_01925;product=substrate-binding domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 142447 143051 . - . ID=gene-SNF32_01930;Name=SNF32_01930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01930;pseudo=true JAXGFV010000002.1 Protein Homology CDS 142447 143051 . - 0 ID=cds-SNF32_01930;Parent=gene-SNF32_01930;Note=frameshifted;Ontology_term=GO:0003676,GO:0052916;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,23S rRNA (guanine(1835)-N(2))-methyltransferase activity|0052916||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734492.1;locus_tag=SNF32_01930;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 JAXGFV010000002.1 cmsearch riboswitch 143381 143548 . + . ID=id-JAXGFV010000002.1:143381..143548;Dbxref=RFAM:RF00380;Note=The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria;bound_moiety=magnesium;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch JAXGFV010000002.1 Genbank gene 143954 144553 . + . ID=gene-SNF32_01935;Name=SNF32_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01935 JAXGFV010000002.1 Protein Homology CDS 143954 144553 . + 0 ID=cds-MDY4306646.1;Parent=gene-SNF32_01935;Dbxref=NCBI_GP:MDY4306646.1;Name=MDY4306646.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012354.3;locus_tag=SNF32_01935;product=LysR family transcriptional regulator;protein_id=MDY4306646.1;transl_table=11 JAXGFV010000002.1 Genbank gene 144616 144879 . + . ID=gene-SNF32_01940;Name=SNF32_01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01940 JAXGFV010000002.1 GeneMarkS-2+ CDS 144616 144879 . + 0 ID=cds-MDY4306647.1;Parent=gene-SNF32_01940;Dbxref=NCBI_GP:MDY4306647.1;Name=MDY4306647.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_01940;product=hypothetical protein;protein_id=MDY4306647.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 145247 146167 . + . ID=gene-SNF32_01945;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=pseudogene;locus_tag=SNF32_01945;pseudo=true JAXGFV010000002.1 Protein Homology CDS 145247 146167 . + 0 ID=cds-SNF32_01945;Parent=gene-SNF32_01945;Note=frameshifted;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010750824.1;locus_tag=SNF32_01945;product=type I pantothenate kinase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 146226 147788 . + . ID=gene-SNF32_01950;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=pseudogene;locus_tag=SNF32_01950;pseudo=true JAXGFV010000002.1 Protein Homology CDS 146226 147788 . + 0 ID=cds-SNF32_01950;Parent=gene-SNF32_01950;Note=frameshifted;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734496.1;locus_tag=SNF32_01950;product=glutamine-hydrolyzing GMP synthase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 148845 149003 . - . ID=gene-SNF32_01955;Name=SNF32_01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01955 JAXGFV010000002.1 Protein Homology CDS 148845 149003 . - 0 ID=cds-MDY4306648.1;Parent=gene-SNF32_01955;Dbxref=NCBI_GP:MDY4306648.1;Name=MDY4306648.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF013540.3;locus_tag=SNF32_01955;product=helix-turn-helix transcriptional regulator;protein_id=MDY4306648.1;transl_table=11 JAXGFV010000002.1 Genbank gene 149455 150144 . + . ID=gene-SNF32_01960;Name=SNF32_01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01960 JAXGFV010000002.1 GeneMarkS-2+ CDS 149455 150144 . + 0 ID=cds-MDY4306649.1;Parent=gene-SNF32_01960;Dbxref=NCBI_GP:MDY4306649.1;Name=MDY4306649.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_01960;product=hypothetical protein;protein_id=MDY4306649.1;transl_table=11 JAXGFV010000002.1 Genbank gene 150791 151036 . - . ID=gene-SNF32_01965;Name=SNF32_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01965 JAXGFV010000002.1 GeneMarkS-2+ CDS 150791 151036 . - 0 ID=cds-MDY4306650.1;Parent=gene-SNF32_01965;Dbxref=NCBI_GP:MDY4306650.1;Name=MDY4306650.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_01965;product=hypothetical protein;protein_id=MDY4306650.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 151102 151569 . - . ID=gene-SNF32_01970;Name=SNF32_01970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01970;pseudo=true JAXGFV010000002.1 Protein Homology CDS 151102 151569 . - 0 ID=cds-SNF32_01970;Parent=gene-SNF32_01970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016623906.1;locus_tag=SNF32_01970;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 152048 154308 . - . ID=gene-SNF32_01975;Name=yicI;gbkey=Gene;gene=yicI;gene_biotype=pseudogene;locus_tag=SNF32_01975;pseudo=true JAXGFV010000002.1 Protein Homology CDS 152048 154308 . - 0 ID=cds-SNF32_01975;Parent=gene-SNF32_01975;Note=frameshifted;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=yicI;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722786.1;locus_tag=SNF32_01975;product=alpha-xylosidase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 154320 155157 . - . ID=gene-SNF32_01980;Name=SNF32_01980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01980;pseudo=true JAXGFV010000002.1 Protein Homology CDS 154320 155157 . - 0 ID=cds-SNF32_01980;Parent=gene-SNF32_01980;Note=frameshifted;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734510.1;locus_tag=SNF32_01980;product=carbohydrate ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 155154 156016 . - . ID=gene-SNF32_01985;Name=SNF32_01985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_01985;pseudo=true JAXGFV010000002.1 Protein Homology CDS 155154 156016 . - 0 ID=cds-SNF32_01985;Parent=gene-SNF32_01985;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008378847.1;locus_tag=SNF32_01985;product=sugar ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 156064 157344 . - . ID=gene-SNF32_01990;Name=SNF32_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01990 JAXGFV010000002.1 Protein Homology CDS 156064 157344 . - 0 ID=cds-MDY4306651.1;Parent=gene-SNF32_01990;Dbxref=NCBI_GP:MDY4306651.1;Name=MDY4306651.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722783.1;locus_tag=SNF32_01990;product=ABC transporter substrate-binding protein;protein_id=MDY4306651.1;transl_table=11 JAXGFV010000002.1 Genbank gene 157455 157865 . + . ID=gene-SNF32_01995;Name=SNF32_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_01995 JAXGFV010000002.1 Protein Homology CDS 157455 157865 . + 0 ID=cds-MDY4306652.1;Parent=gene-SNF32_01995;Dbxref=NCBI_GP:MDY4306652.1;Name=MDY4306652.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019498.3;locus_tag=SNF32_01995;product=cupin domain-containing protein;protein_id=MDY4306652.1;transl_table=11 JAXGFV010000002.1 Genbank gene 158146 158217 . + . ID=gene-SNF32_02000;Name=SNF32_02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02000 JAXGFV010000002.1 Protein Homology CDS 158146 158217 . + 0 ID=cds-MDY4306653.1;Parent=gene-SNF32_02000;Dbxref=NCBI_GP:MDY4306653.1;Name=MDY4306653.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012392.3;locus_tag=SNF32_02000;product=hypothetical protein;protein_id=MDY4306653.1;transl_table=11 JAXGFV010000002.1 Genbank gene 158285 158407 . + . ID=gene-SNF32_02005;Name=SNF32_02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02005 JAXGFV010000002.1 Protein Homology CDS 158285 158407 . + 0 ID=cds-MDY4306654.1;Parent=gene-SNF32_02005;Dbxref=NCBI_GP:MDY4306654.1;Name=MDY4306654.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.3;locus_tag=SNF32_02005;product=AraC family transcriptional regulator;protein_id=MDY4306654.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 159542 160817 . + . ID=gene-SNF32_02010;Name=SNF32_02010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02010;pseudo=true JAXGFV010000002.1 Protein Homology CDS 159542 160817 . + 0 ID=cds-SNF32_02010;Parent=gene-SNF32_02010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736951.1;locus_tag=SNF32_02010;product=GHKL domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 160831 161547 . + . ID=gene-SNF32_02015;Name=SNF32_02015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02015;pseudo=true JAXGFV010000002.1 Protein Homology CDS 160831 161547 . + 0 ID=cds-SNF32_02015;Parent=gene-SNF32_02015;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002286278.1;locus_tag=SNF32_02015;product=LytTR family DNA-binding domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 161712 162175 . - . ID=gene-SNF32_02020;Name=SNF32_02020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02020;pseudo=true JAXGFV010000002.1 Protein Homology CDS 161712 162175 . - 0 ID=cds-SNF32_02020;Parent=gene-SNF32_02020;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629457.1;locus_tag=SNF32_02020;product=TspO/MBR family protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 162575 163198 . - . ID=gene-SNF32_02025;Name=SNF32_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02025 JAXGFV010000002.1 Protein Homology CDS 162575 163198 . - 0 ID=cds-MDY4306655.1;Parent=gene-SNF32_02025;Dbxref=NCBI_GP:MDY4306655.1;Name=MDY4306655.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025108.3;locus_tag=SNF32_02025;product=WxL domain-containing protein;protein_id=MDY4306655.1;transl_table=11 JAXGFV010000002.1 Genbank gene 163225 163440 . - . ID=gene-SNF32_02030;Name=SNF32_02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02030 JAXGFV010000002.1 GeneMarkS-2+ CDS 163225 163440 . - 0 ID=cds-MDY4306656.1;Parent=gene-SNF32_02030;Dbxref=NCBI_GP:MDY4306656.1;Name=MDY4306656.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02030;product=hypothetical protein;protein_id=MDY4306656.1;transl_table=11 JAXGFV010000002.1 Genbank gene 163458 164015 . - . ID=gene-SNF32_02035;Name=SNF32_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02035 JAXGFV010000002.1 GeneMarkS-2+ CDS 163458 164015 . - 0 ID=cds-MDY4306657.1;Parent=gene-SNF32_02035;Dbxref=NCBI_GP:MDY4306657.1;Name=MDY4306657.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02035;product=hypothetical protein;protein_id=MDY4306657.1;transl_table=11 JAXGFV010000002.1 Genbank gene 164252 165130 . - . ID=gene-SNF32_02040;Name=SNF32_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02040 JAXGFV010000002.1 Protein Homology CDS 164252 165130 . - 0 ID=cds-MDY4306658.1;Parent=gene-SNF32_02040;Dbxref=NCBI_GP:MDY4306658.1;Name=MDY4306658.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042900.1;locus_tag=SNF32_02040;product=pectate lyase-like adhesive domain-containing protein;protein_id=MDY4306658.1;transl_table=11 JAXGFV010000002.1 Genbank gene 165127 165303 . - . ID=gene-SNF32_02045;Name=SNF32_02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02045 JAXGFV010000002.1 GeneMarkS-2+ CDS 165127 165303 . - 0 ID=cds-MDY4306659.1;Parent=gene-SNF32_02045;Dbxref=NCBI_GP:MDY4306659.1;Name=MDY4306659.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02045;product=hypothetical protein;protein_id=MDY4306659.1;transl_table=11 JAXGFV010000002.1 Genbank gene 165360 165572 . - . ID=gene-SNF32_02050;Name=SNF32_02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02050 JAXGFV010000002.1 GeneMarkS-2+ CDS 165360 165572 . - 0 ID=cds-MDY4306660.1;Parent=gene-SNF32_02050;Dbxref=NCBI_GP:MDY4306660.1;Name=MDY4306660.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02050;product=hypothetical protein;protein_id=MDY4306660.1;transl_table=11 JAXGFV010000002.1 Genbank gene 165574 166629 . - . ID=gene-SNF32_02055;Name=SNF32_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02055 JAXGFV010000002.1 Protein Homology CDS 165574 166629 . - 0 ID=cds-MDY4306661.1;Parent=gene-SNF32_02055;Dbxref=NCBI_GP:MDY4306661.1;Name=MDY4306661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734520.1;locus_tag=SNF32_02055;product=DUF916 and DUF3324 domain-containing protein;protein_id=MDY4306661.1;transl_table=11 JAXGFV010000002.1 Genbank gene 166730 167521 . - . ID=gene-SNF32_02060;Name=SNF32_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02060 JAXGFV010000002.1 Protein Homology CDS 166730 167521 . - 0 ID=cds-MDY4306662.1;Parent=gene-SNF32_02060;Dbxref=NCBI_GP:MDY4306662.1;Name=MDY4306662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734521.1;locus_tag=SNF32_02060;product=WxL domain-containing protein;protein_id=MDY4306662.1;transl_table=11 JAXGFV010000002.1 Genbank gene 167626 167892 . - . ID=gene-SNF32_02065;Name=SNF32_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02065 JAXGFV010000002.1 Protein Homology CDS 167626 167892 . - 0 ID=cds-MDY4306663.1;Parent=gene-SNF32_02065;Dbxref=NCBI_GP:MDY4306663.1;Name=MDY4306663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016621811.1;locus_tag=SNF32_02065;product=cell wall protein;protein_id=MDY4306663.1;transl_table=11 JAXGFV010000002.1 Genbank gene 168214 168492 . - . ID=gene-SNF32_02070;Name=SNF32_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02070 JAXGFV010000002.1 Protein Homology CDS 168214 168492 . - 0 ID=cds-MDY4306664.1;Parent=gene-SNF32_02070;Dbxref=NCBI_GP:MDY4306664.1;Name=MDY4306664.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF012464.3;locus_tag=SNF32_02070;product=recombinase family protein;protein_id=MDY4306664.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 168494 168754 . - . ID=gene-SNF32_02075;Name=SNF32_02075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02075;pseudo=true JAXGFV010000002.1 Protein Homology CDS 168494 168754 . - 0 ID=cds-SNF32_02075;Parent=gene-SNF32_02075;Note=internal stop;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF012464.3;locus_tag=SNF32_02075;product=recombinase family protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 170209 171135 . - . ID=gene-SNF32_02080;Name=SNF32_02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02080 JAXGFV010000002.1 Protein Homology CDS 170209 171135 . - 0 ID=cds-MDY4306665.1;Parent=gene-SNF32_02080;Dbxref=NCBI_GP:MDY4306665.1;Name=MDY4306665.1;Ontology_term=GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737733.1;locus_tag=SNF32_02080;product=carbohydrate binding domain-containing protein;protein_id=MDY4306665.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 171553 172366 . - . ID=gene-SNF32_02085;Name=SNF32_02085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02085;pseudo=true JAXGFV010000002.1 Protein Homology CDS 171553 172366 . - 0 ID=cds-SNF32_02085;Parent=gene-SNF32_02085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354826.1;locus_tag=SNF32_02085;product=MetQ/NlpA family ABC transporter substrate-binding protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 172377 173048 . - . ID=gene-SNF32_02090;Name=SNF32_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02090 JAXGFV010000002.1 Protein Homology CDS 172377 173048 . - 0 ID=cds-MDY4306666.1;Parent=gene-SNF32_02090;Dbxref=NCBI_GP:MDY4306666.1;Name=MDY4306666.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005235530.1;locus_tag=SNF32_02090;product=ABC transporter permease subunit;protein_id=MDY4306666.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 173023 173760 . - . ID=gene-SNF32_02095;Name=SNF32_02095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02095;pseudo=true JAXGFV010000002.1 Protein Homology CDS 173023 173760 . - 0 ID=cds-SNF32_02095;Parent=gene-SNF32_02095;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734527.1;locus_tag=SNF32_02095;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 174502 174681 . - . ID=gene-SNF32_02100;Name=SNF32_02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02100 JAXGFV010000002.1 GeneMarkS-2+ CDS 174502 174681 . - 0 ID=cds-MDY4306667.1;Parent=gene-SNF32_02100;Dbxref=NCBI_GP:MDY4306667.1;Name=MDY4306667.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02100;product=hypothetical protein;protein_id=MDY4306667.1;transl_table=11 JAXGFV010000002.1 Genbank gene 174731 175456 . - . ID=gene-SNF32_02105;Name=SNF32_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02105 JAXGFV010000002.1 Protein Homology CDS 174731 175456 . - 0 ID=cds-MDY4306668.1;Parent=gene-SNF32_02105;Dbxref=NCBI_GP:MDY4306668.1;Name=MDY4306668.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04085.1;locus_tag=SNF32_02105;product=SPASM domain-containing protein;protein_id=MDY4306668.1;transl_table=11 JAXGFV010000002.1 Genbank gene 175486 175698 . - . ID=gene-SNF32_02110;Name=SNF32_02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02110 JAXGFV010000002.1 Protein Homology CDS 175486 175698 . - 0 ID=cds-MDY4306669.1;Parent=gene-SNF32_02110;Dbxref=NCBI_GP:MDY4306669.1;Name=MDY4306669.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: protein motif:HMM:NF015983.3;locus_tag=SNF32_02110;product=radical SAM protein;protein_id=MDY4306669.1;transl_table=11 JAXGFV010000002.1 Genbank gene 177086 177718 . + . ID=gene-SNF32_02115;Name=SNF32_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02115 JAXGFV010000002.1 Protein Homology CDS 177086 177718 . + 0 ID=cds-MDY4306670.1;Parent=gene-SNF32_02115;Dbxref=NCBI_GP:MDY4306670.1;Name=MDY4306670.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.3;locus_tag=SNF32_02115;product=ATP-binding cassette domain-containing protein;protein_id=MDY4306670.1;transl_table=11 JAXGFV010000002.1 Genbank gene 177793 178032 . + . ID=gene-SNF32_02120;Name=SNF32_02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02120 JAXGFV010000002.1 Protein Homology CDS 177793 178032 . + 0 ID=cds-MDY4306671.1;Parent=gene-SNF32_02120;Dbxref=NCBI_GP:MDY4306671.1;Name=MDY4306671.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.3;locus_tag=SNF32_02120;product=ATP-binding cassette domain-containing protein;protein_id=MDY4306671.1;transl_table=11 JAXGFV010000002.1 Genbank gene 178153 178473 . - . ID=gene-SNF32_02125;Name=SNF32_02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02125 JAXGFV010000002.1 GeneMarkS-2+ CDS 178153 178473 . - 0 ID=cds-MDY4306672.1;Parent=gene-SNF32_02125;Dbxref=NCBI_GP:MDY4306672.1;Name=MDY4306672.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02125;product=hypothetical protein;protein_id=MDY4306672.1;transl_table=11 JAXGFV010000002.1 Genbank gene 178389 178682 . - . ID=gene-SNF32_02130;Name=SNF32_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02130 JAXGFV010000002.1 Protein Homology CDS 178389 178682 . - 0 ID=cds-MDY4306673.1;Parent=gene-SNF32_02130;Dbxref=NCBI_GP:MDY4306673.1;Name=MDY4306673.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: protein motif:HMM:NF025033.3;locus_tag=SNF32_02130;product=class I SAM-dependent methyltransferase;protein_id=MDY4306673.1;transl_table=11 JAXGFV010000002.1 Genbank gene 178619 178978 . - . ID=gene-SNF32_02135;Name=SNF32_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02135 JAXGFV010000002.1 Protein Homology CDS 178619 178978 . - 0 ID=cds-MDY4306674.1;Parent=gene-SNF32_02135;Dbxref=NCBI_GP:MDY4306674.1;Name=MDY4306674.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734532.1;locus_tag=SNF32_02135;product=class I SAM-dependent methyltransferase;protein_id=MDY4306674.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 179423 179984 . - . ID=gene-SNF32_02140;Name=SNF32_02140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02140;pseudo=true JAXGFV010000002.1 Protein Homology CDS 179423 179984 . - 0 ID=cds-SNF32_02140;Parent=gene-SNF32_02140;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722673.1;locus_tag=SNF32_02140;product=TIGR00730 family Rossman fold protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 180052 180368 . + . ID=gene-SNF32_02145;Name=SNF32_02145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02145;pseudo=true JAXGFV010000002.1 Protein Homology CDS 180052 180368 . + 0 ID=cds-SNF32_02145;Parent=gene-SNF32_02145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722674.1;locus_tag=SNF32_02145;product=MazG-like family protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 180455 181200 . + . ID=gene-SNF32_02150;Name=SNF32_02150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02150;pseudo=true JAXGFV010000002.1 Protein Homology CDS 180455 181200 . + 0 ID=cds-SNF32_02150;Parent=gene-SNF32_02150;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734536.1;locus_tag=SNF32_02150;product=MurR/RpiR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 181346 182654 . + . ID=gene-SNF32_02155;Name=SNF32_02155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02155;pseudo=true JAXGFV010000002.1 Protein Homology CDS 181346 182654 . + 0 ID=cds-SNF32_02155;Parent=gene-SNF32_02155;Note=frameshifted;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005232697.1;locus_tag=SNF32_02155;product=PTS transporter subunit EIIC;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 182729 184121 . + . ID=gene-SNF32_02160;Name=SNF32_02160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02160;pseudo=true JAXGFV010000002.1 Protein Homology CDS 182729 184121 . + 0 ID=cds-SNF32_02160;Parent=gene-SNF32_02160;Note=frameshifted;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010742914.1;locus_tag=SNF32_02160;product=6-phospho-beta-glucosidase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 184174 185198 . - . ID=gene-SNF32_02165;Name=SNF32_02165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02165;pseudo=true JAXGFV010000002.1 Protein Homology CDS 184174 185198 . - 0 ID=cds-SNF32_02165;Parent=gene-SNF32_02165;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734540.1;locus_tag=SNF32_02165;product=FUSC family protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 186741 187317 . - . ID=gene-SNF32_02170;Name=SNF32_02170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02170;pseudo=true JAXGFV010000002.1 Protein Homology CDS 186741 187317 . - 0 ID=cds-SNF32_02170;Parent=gene-SNF32_02170;Note=frameshifted;Ontology_term=GO:0005267,GO:0015252;gbkey=CDS;go_function=potassium channel activity|0005267||IEA,proton channel activity|0015252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002292646.1;locus_tag=SNF32_02170;product=TMEM175 family protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 187512 187709 . + . ID=gene-SNF32_02175;Name=SNF32_02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02175 JAXGFV010000002.1 Protein Homology CDS 187512 187709 . + 0 ID=cds-MDY4306675.1;Parent=gene-SNF32_02175;Dbxref=NCBI_GP:MDY4306675.1;Name=MDY4306675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734544.1;locus_tag=SNF32_02175;product=hypothetical protein;protein_id=MDY4306675.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 187789 188605 . - . ID=gene-SNF32_02180;Name=SNF32_02180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02180;pseudo=true JAXGFV010000002.1 Protein Homology CDS 187789 188605 . - 0 ID=cds-SNF32_02180;Parent=gene-SNF32_02180;Note=frameshifted;Ontology_term=GO:0030001,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354454.1;locus_tag=SNF32_02180;product=ZIP family metal transporter;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 188711 189187 . - . ID=gene-SNF32_02185;Name=SNF32_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02185 JAXGFV010000002.1 GeneMarkS-2+ CDS 188711 189187 . - 0 ID=cds-MDY4306676.1;Parent=gene-SNF32_02185;Dbxref=NCBI_GP:MDY4306676.1;Name=MDY4306676.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02185;product=hypothetical protein;protein_id=MDY4306676.1;transl_table=11 JAXGFV010000002.1 Genbank gene 189246 189677 . - . ID=gene-SNF32_02190;Name=SNF32_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02190 JAXGFV010000002.1 Protein Homology CDS 189246 189677 . - 0 ID=cds-MDY4306677.1;Parent=gene-SNF32_02190;Dbxref=NCBI_GP:MDY4306677.1;Name=MDY4306677.1;Ontology_term=GO:0016491,GO:0016651;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;inference=COORDINATES: protein motif:HMM:NF013567.3;locus_tag=SNF32_02190;product=Gfo/Idh/MocA family oxidoreductase;protein_id=MDY4306677.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 189836 191577 . + . ID=gene-SNF32_02195;Name=spxB;gbkey=Gene;gene=spxB;gene_biotype=pseudogene;locus_tag=SNF32_02195;pseudo=true JAXGFV010000002.1 Protein Homology CDS 189836 191577 . + 0 ID=cds-SNF32_02195;Parent=gene-SNF32_02195;Note=frameshifted;Ontology_term=GO:0009444,GO:0047112;gbkey=CDS;gene=spxB;go_function=pyruvate oxidase activity|0047112||IEA;go_process=pyruvate oxidation|0009444||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722683.1;locus_tag=SNF32_02195;product=pyruvate oxidase;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank gene 191678 192199 . - . ID=gene-SNF32_02200;Name=SNF32_02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02200 JAXGFV010000002.1 Protein Homology CDS 191678 192199 . - 0 ID=cds-MDY4306678.1;Parent=gene-SNF32_02200;Dbxref=NCBI_GP:MDY4306678.1;Name=MDY4306678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002342318.1;locus_tag=SNF32_02200;product=DUF308 domain-containing protein;protein_id=MDY4306678.1;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 192432 194052 . + . ID=gene-SNF32_02205;Name=SNF32_02205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02205;pseudo=true JAXGFV010000002.1 Protein Homology CDS 192432 194052 . + 0 ID=cds-SNF32_02205;Parent=gene-SNF32_02205;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003129260.1;locus_tag=SNF32_02205;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000002.1 Genbank pseudogene 194124 194986 . - . ID=gene-SNF32_02210;Name=SNF32_02210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02210;pseudo=true JAXGFV010000002.1 Protein Homology CDS 194124 194986 . - 0 ID=cds-SNF32_02210;Parent=gene-SNF32_02210;Note=frameshifted;Ontology_term=GO:0005504;gbkey=CDS;go_function=fatty acid binding|0005504||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328633.1;locus_tag=SNF32_02210;product=DegV family protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000020.1 1 39395 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000020.1 Genbank region 1 39395 . + . ID=JAXGFV010000020.1:1..39395;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000020.1 Genbank pseudogene 146 441 . + . ID=gene-SNF32_09925;Name=SNF32_09925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09925;pseudo=true JAXGFV010000020.1 Protein Homology CDS 146 441 . + 0 ID=cds-SNF32_09925;Parent=gene-SNF32_09925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005880299.1;locus_tag=SNF32_09925;product=bacteriocin immunity protein;pseudo=true;transl_table=11 JAXGFV010000020.1 Genbank gene 571 1191 . - . ID=gene-SNF32_09930;Name=SNF32_09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09930 JAXGFV010000020.1 Protein Homology CDS 571 1191 . - 0 ID=cds-MDY4307524.1;Parent=gene-SNF32_09930;Dbxref=NCBI_GP:MDY4307524.1;Name=MDY4307524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002340253.1;locus_tag=SNF32_09930;product=NAD(P)H-dependent oxidoreductase;protein_id=MDY4307524.1;transl_table=11 JAXGFV010000020.1 Genbank pseudogene 1805 2447 . + . ID=gene-SNF32_09935;Name=SNF32_09935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09935;pseudo=true JAXGFV010000020.1 Protein Homology CDS 1805 2447 . + 0 ID=cds-SNF32_09935;Parent=gene-SNF32_09935;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629554.1;locus_tag=SNF32_09935;product=TetR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000020.1 Genbank pseudogene 2463 4188 . + . ID=gene-SNF32_09940;Name=SNF32_09940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09940;pseudo=true JAXGFV010000020.1 Protein Homology CDS 2463 4188 . + 0 ID=cds-SNF32_09940;Parent=gene-SNF32_09940;Note=frameshifted;Ontology_term=GO:0005524,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736658.1;locus_tag=SNF32_09940;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000020.1 Genbank pseudogene 4185 6061 . + . ID=gene-SNF32_09945;Name=SNF32_09945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09945;pseudo=true JAXGFV010000020.1 Protein Homology CDS 4185 6061 . + 0 ID=cds-SNF32_09945;Parent=gene-SNF32_09945;Note=frameshifted;Ontology_term=GO:0005524,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016853211.1;locus_tag=SNF32_09945;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000020.1 Genbank pseudogene 6304 7157 . + . ID=gene-SNF32_09950;Name=SNF32_09950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09950;pseudo=true JAXGFV010000020.1 Protein Homology CDS 6304 7157 . + 0 ID=cds-SNF32_09950;Parent=gene-SNF32_09950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724004.1;locus_tag=SNF32_09950;product=VOC family protein;pseudo=true;transl_table=11 JAXGFV010000020.1 Genbank pseudogene 7351 8367 . + . ID=gene-SNF32_09955;Name=SNF32_09955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09955;pseudo=true JAXGFV010000020.1 Protein Homology CDS 7351 8367 . + 0 ID=cds-SNF32_09955;Parent=gene-SNF32_09955;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736655.1;locus_tag=SNF32_09955;product=serine hydrolase domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000020.1 Genbank pseudogene 8413 9358 . + . ID=gene-SNF32_09960;Name=manA;gbkey=Gene;gene=manA;gene_biotype=pseudogene;locus_tag=SNF32_09960;pseudo=true JAXGFV010000020.1 Protein Homology CDS 8413 9358 . + 0 ID=cds-SNF32_09960;Parent=gene-SNF32_09960;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005975,GO:0004476;gbkey=CDS;gene=manA;go_function=mannose-6-phosphate isomerase activity|0004476||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005879302.1;locus_tag=SNF32_09960;product=mannose-6-phosphate isomerase%2C class I;pseudo=true;transl_table=11 JAXGFV010000020.1 Genbank pseudogene 9640 10546 . + . ID=gene-SNF32_09965;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=pseudogene;locus_tag=SNF32_09965;pseudo=true JAXGFV010000020.1 Protein Homology CDS 9640 10546 . + 0 ID=cds-SNF32_09965;Parent=gene-SNF32_09965;Note=frameshifted;Ontology_term=GO:0019303,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose catabolic process|0019303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736653.1;locus_tag=SNF32_09965;product=ribokinase;pseudo=true;transl_table=11 JAXGFV010000020.1 Genbank pseudogene 10619 10962 . + . ID=gene-SNF32_09970;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=pseudogene;locus_tag=SNF32_09970;pseudo=true JAXGFV010000020.1 Protein Homology CDS 10619 10962 . + 0 ID=cds-SNF32_09970;Parent=gene-SNF32_09970;Note=frameshifted;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002307931.1;locus_tag=SNF32_09970;product=D-ribose pyranase;pseudo=true;transl_table=11 JAXGFV010000020.1 Genbank pseudogene 10979 11865 . + . ID=gene-SNF32_09975;Name=SNF32_09975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09975;pseudo=true JAXGFV010000020.1 Protein Homology CDS 10979 11865 . + 0 ID=cds-SNF32_09975;Parent=gene-SNF32_09975;Note=frameshifted;Ontology_term=GO:0034219,GO:0015144,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003641602.1;locus_tag=SNF32_09975;product=GRP family sugar transporter;pseudo=true;transl_table=11 JAXGFV010000020.1 Genbank pseudogene 12107 13709 . + . ID=gene-SNF32_09980;Name=SNF32_09980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09980;pseudo=true JAXGFV010000020.1 Protein Homology CDS 12107 13709 . + 0 ID=cds-SNF32_09980;Parent=gene-SNF32_09980;Note=frameshifted;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736650.1;locus_tag=SNF32_09980;product=PTS transporter subunit EIIC;pseudo=true;transl_table=11 JAXGFV010000020.1 Genbank pseudogene 13711 15745 . + . ID=gene-SNF32_09985;Name=SNF32_09985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09985;pseudo=true JAXGFV010000020.1 Protein Homology CDS 13711 15745 . + 0 ID=cds-SNF32_09985;Parent=gene-SNF32_09985;Note=frameshifted;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723006.1;locus_tag=SNF32_09985;product=PRD domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000020.1 Genbank pseudogene 15745 16185 . + . ID=gene-SNF32_09990;Name=SNF32_09990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_09990;pseudo=true JAXGFV010000020.1 Protein Homology CDS 15745 16185 . + 0 ID=cds-SNF32_09990;Parent=gene-SNF32_09990;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723005.1;locus_tag=SNF32_09990;product=PTS sugar transporter subunit IIA;pseudo=true;transl_table=11 JAXGFV010000020.1 Genbank gene 16408 16560 . + . ID=gene-SNF32_09995;Name=SNF32_09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_09995 JAXGFV010000020.1 GeneMarkS-2+ CDS 16408 16560 . + 0 ID=cds-MDY4307525.1;Parent=gene-SNF32_09995;Dbxref=NCBI_GP:MDY4307525.1;Name=MDY4307525.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_09995;product=hypothetical protein;protein_id=MDY4307525.1;transl_table=11 JAXGFV010000020.1 Genbank gene 16581 17459 . + . ID=gene-SNF32_10000;Name=SNF32_10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10000 JAXGFV010000020.1 GeneMarkS-2+ CDS 16581 17459 . + 0 ID=cds-MDY4307526.1;Parent=gene-SNF32_10000;Dbxref=NCBI_GP:MDY4307526.1;Name=MDY4307526.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10000;product=hypothetical protein;protein_id=MDY4307526.1;transl_table=11 JAXGFV010000020.1 Genbank gene 17465 18205 . + . ID=gene-SNF32_10005;Name=SNF32_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10005 JAXGFV010000020.1 Protein Homology CDS 17465 18205 . + 0 ID=cds-MDY4307527.1;Parent=gene-SNF32_10005;Dbxref=NCBI_GP:MDY4307527.1;Name=MDY4307527.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037639.3;locus_tag=SNF32_10005;product=SpaA isopeptide-forming pilin-related protein;protein_id=MDY4307527.1;transl_table=11 JAXGFV010000020.1 Genbank gene 18172 18462 . + . ID=gene-SNF32_10010;Name=SNF32_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10010 JAXGFV010000020.1 Protein Homology CDS 18172 18462 . + 0 ID=cds-MDY4307528.1;Parent=gene-SNF32_10010;Dbxref=NCBI_GP:MDY4307528.1;Name=MDY4307528.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037639.3;locus_tag=SNF32_10010;product=hypothetical protein;protein_id=MDY4307528.1;transl_table=11 JAXGFV010000020.1 Genbank gene 18462 18845 . + . ID=gene-SNF32_10015;Name=SNF32_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10015 JAXGFV010000020.1 Protein Homology CDS 18462 18845 . + 0 ID=cds-MDY4307529.1;Parent=gene-SNF32_10015;Dbxref=NCBI_GP:MDY4307529.1;Name=MDY4307529.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037639.3;locus_tag=SNF32_10015;product=SpaA isopeptide-forming pilin-related protein;protein_id=MDY4307529.1;transl_table=11 JAXGFV010000020.1 Genbank gene 18889 19446 . + . ID=gene-SNF32_10020;Name=SNF32_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10020 JAXGFV010000020.1 Protein Homology CDS 18889 19446 . + 0 ID=cds-MDY4307530.1;Parent=gene-SNF32_10020;Dbxref=NCBI_GP:MDY4307530.1;Name=MDY4307530.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF037291.3;locus_tag=SNF32_10020;product=LPXTG cell wall anchor domain-containing protein;protein_id=MDY4307530.1;transl_table=11 JAXGFV010000020.1 Genbank gene 19467 20738 . + . ID=gene-SNF32_10025;Name=SNF32_10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10025 JAXGFV010000020.1 Protein Homology CDS 19467 20738 . + 0 ID=cds-MDY4307531.1;Parent=gene-SNF32_10025;Dbxref=NCBI_GP:MDY4307531.1;Name=MDY4307531.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027718.3;locus_tag=SNF32_10025;product=DUF5011 domain-containing protein;protein_id=MDY4307531.1;transl_table=11 JAXGFV010000020.1 Genbank gene 21096 21257 . + . ID=gene-SNF32_10030;Name=SNF32_10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10030 JAXGFV010000020.1 GeneMarkS-2+ CDS 21096 21257 . + 0 ID=cds-MDY4307532.1;Parent=gene-SNF32_10030;Dbxref=NCBI_GP:MDY4307532.1;Name=MDY4307532.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10030;product=hypothetical protein;protein_id=MDY4307532.1;transl_table=11 JAXGFV010000020.1 Genbank gene 21312 21593 . + . ID=gene-SNF32_10035;Name=SNF32_10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10035 JAXGFV010000020.1 GeneMarkS-2+ CDS 21312 21593 . + 0 ID=cds-MDY4307533.1;Parent=gene-SNF32_10035;Dbxref=NCBI_GP:MDY4307533.1;Name=MDY4307533.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10035;product=hypothetical protein;protein_id=MDY4307533.1;transl_table=11 JAXGFV010000020.1 Genbank gene 21590 21811 . + . ID=gene-SNF32_10040;Name=SNF32_10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10040 JAXGFV010000020.1 GeneMarkS-2+ CDS 21590 21811 . + 0 ID=cds-MDY4307534.1;Parent=gene-SNF32_10040;Dbxref=NCBI_GP:MDY4307534.1;Name=MDY4307534.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10040;product=hypothetical protein;protein_id=MDY4307534.1;transl_table=11 JAXGFV010000020.1 Genbank gene 21916 22140 . + . ID=gene-SNF32_10045;Name=SNF32_10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10045 JAXGFV010000020.1 GeneMarkS-2+ CDS 21916 22140 . + 0 ID=cds-MDY4307535.1;Parent=gene-SNF32_10045;Dbxref=NCBI_GP:MDY4307535.1;Name=MDY4307535.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10045;product=hypothetical protein;protein_id=MDY4307535.1;transl_table=11 JAXGFV010000020.1 Genbank gene 22162 22482 . + . ID=gene-SNF32_10050;Name=SNF32_10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10050 JAXGFV010000020.1 Protein Homology CDS 22162 22482 . + 0 ID=cds-MDY4307536.1;Parent=gene-SNF32_10050;Dbxref=NCBI_GP:MDY4307536.1;Name=MDY4307536.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024078.3;locus_tag=SNF32_10050;product=PrgI family protein;protein_id=MDY4307536.1;transl_table=11 JAXGFV010000020.1 Genbank gene 22832 23269 . + . ID=gene-SNF32_10055;Name=SNF32_10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10055 JAXGFV010000020.1 GeneMarkS-2+ CDS 22832 23269 . + 0 ID=cds-MDY4307537.1;Parent=gene-SNF32_10055;Dbxref=NCBI_GP:MDY4307537.1;Name=MDY4307537.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10055;product=hypothetical protein;protein_id=MDY4307537.1;transl_table=11 JAXGFV010000020.1 Genbank gene 23406 23840 . + . ID=gene-SNF32_10060;Name=SNF32_10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10060 JAXGFV010000020.1 GeneMarkS-2+ CDS 23406 23840 . + 0 ID=cds-MDY4307538.1;Parent=gene-SNF32_10060;Dbxref=NCBI_GP:MDY4307538.1;Name=MDY4307538.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10060;product=hypothetical protein;protein_id=MDY4307538.1;transl_table=11 JAXGFV010000020.1 Genbank gene 24082 24282 . + . ID=gene-SNF32_10065;Name=SNF32_10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10065 JAXGFV010000020.1 GeneMarkS-2+ CDS 24082 24282 . + 0 ID=cds-MDY4307539.1;Parent=gene-SNF32_10065;Dbxref=NCBI_GP:MDY4307539.1;Name=MDY4307539.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10065;product=hypothetical protein;protein_id=MDY4307539.1;transl_table=11 JAXGFV010000020.1 Genbank gene 24255 24671 . + . ID=gene-SNF32_10070;Name=SNF32_10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10070 JAXGFV010000020.1 GeneMarkS-2+ CDS 24255 24671 . + 0 ID=cds-MDY4307540.1;Parent=gene-SNF32_10070;Dbxref=NCBI_GP:MDY4307540.1;Name=MDY4307540.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10070;product=hypothetical protein;protein_id=MDY4307540.1;transl_table=11 JAXGFV010000020.1 Genbank gene 24665 24865 . + . ID=gene-SNF32_10075;Name=SNF32_10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10075 JAXGFV010000020.1 GeneMarkS-2+ CDS 24665 24865 . + 0 ID=cds-MDY4307541.1;Parent=gene-SNF32_10075;Dbxref=NCBI_GP:MDY4307541.1;Name=MDY4307541.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10075;product=hypothetical protein;protein_id=MDY4307541.1;transl_table=11 JAXGFV010000020.1 Genbank gene 25144 25683 . + . ID=gene-SNF32_10080;Name=SNF32_10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10080 JAXGFV010000020.1 GeneMarkS-2+ CDS 25144 25683 . + 0 ID=cds-MDY4307542.1;Parent=gene-SNF32_10080;Dbxref=NCBI_GP:MDY4307542.1;Name=MDY4307542.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10080;product=hypothetical protein;protein_id=MDY4307542.1;transl_table=11 JAXGFV010000020.1 Genbank gene 25689 25901 . + . ID=gene-SNF32_10085;Name=SNF32_10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10085 JAXGFV010000020.1 GeneMarkS-2+ CDS 25689 25901 . + 0 ID=cds-MDY4307543.1;Parent=gene-SNF32_10085;Dbxref=NCBI_GP:MDY4307543.1;Name=MDY4307543.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10085;product=hypothetical protein;protein_id=MDY4307543.1;transl_table=11 JAXGFV010000020.1 Genbank gene 25973 27013 . + . ID=gene-SNF32_10090;Name=SNF32_10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10090 JAXGFV010000020.1 Protein Homology CDS 25973 27013 . + 0 ID=cds-MDY4307544.1;Parent=gene-SNF32_10090;Dbxref=NCBI_GP:MDY4307544.1;Name=MDY4307544.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017219.3;locus_tag=SNF32_10090;product=peptidoglycan amidohydrolase family protein;protein_id=MDY4307544.1;transl_table=11 JAXGFV010000020.1 Genbank gene 27415 27768 . + . ID=gene-SNF32_10095;Name=SNF32_10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10095 JAXGFV010000020.1 GeneMarkS-2+ CDS 27415 27768 . + 0 ID=cds-MDY4307545.1;Parent=gene-SNF32_10095;Dbxref=NCBI_GP:MDY4307545.1;Name=MDY4307545.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10095;product=hypothetical protein;protein_id=MDY4307545.1;transl_table=11 JAXGFV010000020.1 Genbank gene 27787 28056 . + . ID=gene-SNF32_10100;Name=SNF32_10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10100 JAXGFV010000020.1 GeneMarkS-2+ CDS 27787 28056 . + 0 ID=cds-MDY4307546.1;Parent=gene-SNF32_10100;Dbxref=NCBI_GP:MDY4307546.1;Name=MDY4307546.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10100;product=hypothetical protein;protein_id=MDY4307546.1;transl_table=11 JAXGFV010000020.1 Genbank gene 28044 28427 . + . ID=gene-SNF32_10105;Name=SNF32_10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10105 JAXGFV010000020.1 GeneMarkS-2+ CDS 28044 28427 . + 0 ID=cds-MDY4307547.1;Parent=gene-SNF32_10105;Dbxref=NCBI_GP:MDY4307547.1;Name=MDY4307547.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10105;product=hypothetical protein;protein_id=MDY4307547.1;transl_table=11 JAXGFV010000020.1 Genbank pseudogene 28711 30442 . + . ID=gene-SNF32_10110;Name=SNF32_10110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10110;pseudo=true JAXGFV010000020.1 Protein Homology CDS 28711 30442 . + 0 ID=cds-SNF32_10110;Parent=gene-SNF32_10110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010706745.1;locus_tag=SNF32_10110;product=PTS mannitol-specific transporter subunit IIBC;pseudo=true;transl_table=11 JAXGFV010000020.1 Genbank pseudogene 30460 30896 . + . ID=gene-SNF32_10115;Name=SNF32_10115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10115;pseudo=true JAXGFV010000020.1 Protein Homology CDS 30460 30896 . + 0 ID=cds-SNF32_10115;Parent=gene-SNF32_10115;Note=frameshifted;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002314097.1;locus_tag=SNF32_10115;product=PTS sugar transporter subunit IIA;pseudo=true;transl_table=11 JAXGFV010000020.1 Genbank pseudogene 30910 32058 . + . ID=gene-SNF32_10120;Name=SNF32_10120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10120;pseudo=true JAXGFV010000020.1 Protein Homology CDS 30910 32058 . + 0 ID=cds-SNF32_10120;Parent=gene-SNF32_10120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008267095.1;locus_tag=SNF32_10120;product=mannitol-1-phosphate 5-dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000020.1 Genbank pseudogene 32142 32840 . - . ID=gene-SNF32_10125;Name=SNF32_10125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10125;pseudo=true JAXGFV010000020.1 Protein Homology CDS 32142 32840 . - 0 ID=cds-SNF32_10125;Parent=gene-SNF32_10125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723472.1;locus_tag=SNF32_10125;product=type 1 glutamine amidotransferase;pseudo=true;transl_table=11 JAXGFV010000020.1 Genbank pseudogene 32833 34182 . - . ID=gene-SNF32_10130;Name=SNF32_10130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10130;pseudo=true JAXGFV010000020.1 Protein Homology CDS 32833 34182 . - 0 ID=cds-SNF32_10130;Parent=gene-SNF32_10130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002343391.1;locus_tag=SNF32_10130;product=Mur ligase family protein;pseudo=true;transl_table=11 JAXGFV010000020.1 Genbank pseudogene 34380 35770 . - . ID=gene-SNF32_10135;Name=SNF32_10135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10135;pseudo=true JAXGFV010000020.1 Protein Homology CDS 34380 35770 . - 0 ID=cds-SNF32_10135;Parent=gene-SNF32_10135;Note=frameshifted;Ontology_term=GO:0015079;gbkey=CDS;go_function=potassium ion transmembrane transporter activity|0015079||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629268.1;locus_tag=SNF32_10135;product=TrkH family potassium uptake protein;pseudo=true;transl_table=11 JAXGFV010000020.1 Genbank gene 36133 36606 . + . ID=gene-SNF32_10140;Name=SNF32_10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10140 JAXGFV010000020.1 Protein Homology CDS 36133 36606 . + 0 ID=cds-MDY4307548.1;Parent=gene-SNF32_10140;Dbxref=NCBI_GP:MDY4307548.1;Name=MDY4307548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002310106.1;locus_tag=SNF32_10140;product=hypothetical protein;protein_id=MDY4307548.1;transl_table=11 JAXGFV010000020.1 Genbank pseudogene 36603 37414 . + . ID=gene-SNF32_10145;Name=SNF32_10145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10145;pseudo=true JAXGFV010000020.1 Protein Homology CDS 36603 37414 . + 0 ID=cds-SNF32_10145;Parent=gene-SNF32_10145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005879261.1;locus_tag=SNF32_10145;product=DUF6681 family protein;pseudo=true;transl_table=11 JAXGFV010000020.1 Genbank pseudogene 37581 38149 . + . ID=gene-SNF32_10150;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=pseudogene;locus_tag=SNF32_10150;pseudo=true JAXGFV010000020.1 Protein Homology CDS 37581 38149 . + 0 ID=cds-SNF32_10150;Parent=gene-SNF32_10150;Note=frameshifted;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002325407.1;locus_tag=SNF32_10150;product=signal peptidase I;pseudo=true;transl_table=11 JAXGFV010000020.1 Genbank pseudogene 38394 39344 . + . ID=gene-SNF32_10155;Name=SNF32_10155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10155;pseudo=true JAXGFV010000020.1 Protein Homology CDS 38394 39344 . + 0 ID=cds-SNF32_10155;Parent=gene-SNF32_10155;Note=frameshifted;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736629.1;locus_tag=SNF32_10155;product=peptidylprolyl isomerase;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000021.1 1 37200 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000021.1 Genbank region 1 37200 . + . ID=JAXGFV010000021.1:1..37200;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000021.1 Genbank gene 815 1684 . + . ID=gene-SNF32_10160;Name=SNF32_10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10160 JAXGFV010000021.1 GeneMarkS-2+ CDS 815 1684 . + 0 ID=cds-MDY4307549.1;Parent=gene-SNF32_10160;Dbxref=NCBI_GP:MDY4307549.1;Name=MDY4307549.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10160;product=hypothetical protein;protein_id=MDY4307549.1;transl_table=11 JAXGFV010000021.1 Genbank gene 1734 2003 . + . ID=gene-SNF32_10165;Name=SNF32_10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10165 JAXGFV010000021.1 GeneMarkS-2+ CDS 1734 2003 . + 0 ID=cds-MDY4307550.1;Parent=gene-SNF32_10165;Dbxref=NCBI_GP:MDY4307550.1;Name=MDY4307550.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10165;product=hypothetical protein;protein_id=MDY4307550.1;transl_table=11 JAXGFV010000021.1 Genbank gene 2000 2143 . + . ID=gene-SNF32_10170;Name=SNF32_10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10170 JAXGFV010000021.1 GeneMarkS-2+ CDS 2000 2143 . + 0 ID=cds-MDY4307551.1;Parent=gene-SNF32_10170;Dbxref=NCBI_GP:MDY4307551.1;Name=MDY4307551.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10170;product=hypothetical protein;protein_id=MDY4307551.1;transl_table=11 JAXGFV010000021.1 Genbank gene 2248 2655 . + . ID=gene-SNF32_10175;Name=SNF32_10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10175 JAXGFV010000021.1 Protein Homology CDS 2248 2655 . + 0 ID=cds-MDY4307552.1;Parent=gene-SNF32_10175;Dbxref=NCBI_GP:MDY4307552.1;Name=MDY4307552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177686.1;locus_tag=SNF32_10175;product=hypothetical protein;protein_id=MDY4307552.1;transl_table=11 JAXGFV010000021.1 Genbank gene 2959 3228 . - . ID=gene-SNF32_10180;Name=SNF32_10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10180 JAXGFV010000021.1 GeneMarkS-2+ CDS 2959 3228 . - 0 ID=cds-MDY4307553.1;Parent=gene-SNF32_10180;Dbxref=NCBI_GP:MDY4307553.1;Name=MDY4307553.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10180;product=hypothetical protein;protein_id=MDY4307553.1;transl_table=11 JAXGFV010000021.1 Genbank gene 3321 3653 . - . ID=gene-SNF32_10185;Name=SNF32_10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10185 JAXGFV010000021.1 GeneMarkS-2+ CDS 3321 3653 . - 0 ID=cds-MDY4307554.1;Parent=gene-SNF32_10185;Dbxref=NCBI_GP:MDY4307554.1;Name=MDY4307554.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10185;product=hypothetical protein;protein_id=MDY4307554.1;transl_table=11 JAXGFV010000021.1 Genbank pseudogene 3799 4404 . - . ID=gene-SNF32_10190;Name=SNF32_10190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10190;pseudo=true JAXGFV010000021.1 Protein Homology CDS 3799 4404 . - 0 ID=cds-SNF32_10190;Parent=gene-SNF32_10190;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736186.1;locus_tag=SNF32_10190;product=metallophosphoesterase;pseudo=true;transl_table=11 JAXGFV010000021.1 Genbank pseudogene 4496 5768 . - . ID=gene-SNF32_10195;Name=SNF32_10195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10195;pseudo=true JAXGFV010000021.1 Protein Homology CDS 4496 5768 . - 0 ID=cds-SNF32_10195;Parent=gene-SNF32_10195;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002308213.1;locus_tag=SNF32_10195;product=MFS transporter;pseudo=true;transl_table=11 JAXGFV010000021.1 Genbank gene 5854 6186 . + . ID=gene-SNF32_10200;Name=SNF32_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10200 JAXGFV010000021.1 GeneMarkS-2+ CDS 5854 6186 . + 0 ID=cds-MDY4307555.1;Parent=gene-SNF32_10200;Dbxref=NCBI_GP:MDY4307555.1;Name=MDY4307555.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10200;product=hypothetical protein;protein_id=MDY4307555.1;transl_table=11 JAXGFV010000021.1 Genbank pseudogene 6258 6632 . + . ID=gene-SNF32_10205;Name=SNF32_10205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10205;pseudo=true JAXGFV010000021.1 Protein Homology CDS 6258 6632 . + 0 ID=cds-SNF32_10205;Parent=gene-SNF32_10205;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010720815.1;locus_tag=SNF32_10205;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000021.1 Genbank pseudogene 6775 7121 . - . ID=gene-SNF32_10210;Name=SNF32_10210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10210;pseudo=true JAXGFV010000021.1 Protein Homology CDS 6775 7121 . - 0 ID=cds-SNF32_10210;Parent=gene-SNF32_10210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736189.1;locus_tag=SNF32_10210;product=DUF1831 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000021.1 Genbank pseudogene 7197 8325 . - . ID=gene-SNF32_10215;Name=SNF32_10215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10215;pseudo=true JAXGFV010000021.1 Protein Homology CDS 7197 8325 . - 0 ID=cds-SNF32_10215;Parent=gene-SNF32_10215;Note=frameshifted;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736190.1;locus_tag=SNF32_10215;product=cysteine desulfurase family protein;pseudo=true;transl_table=11 JAXGFV010000021.1 Genbank pseudogene 8488 9467 . - . ID=gene-SNF32_10220;Name=SNF32_10220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10220;pseudo=true JAXGFV010000021.1 Protein Homology CDS 8488 9467 . - 0 ID=cds-SNF32_10220;Parent=gene-SNF32_10220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005472824.1;locus_tag=SNF32_10220;product=ribose-phosphate diphosphokinase;pseudo=true;transl_table=11 JAXGFV010000021.1 Genbank pseudogene 9545 10398 . - . ID=gene-SNF32_10225;Name=SNF32_10225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10225;pseudo=true JAXGFV010000021.1 Protein Homology CDS 9545 10398 . - 0 ID=cds-SNF32_10225;Parent=gene-SNF32_10225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723537.1;locus_tag=SNF32_10225;product=dihydrolipoamide dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000021.1 Genbank pseudogene 10702 12454 . + . ID=gene-SNF32_10230;Name=SNF32_10230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10230;pseudo=true JAXGFV010000021.1 Protein Homology CDS 10702 12454 . + 0 ID=cds-SNF32_10230;Parent=gene-SNF32_10230;Note=frameshifted;Ontology_term=GO:0008237,GO:0008270;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:NF017464.3;locus_tag=SNF32_10230;product=M13 family metallopeptidase;pseudo=true;transl_table=11 JAXGFV010000021.1 Genbank gene 12946 13056 . - . ID=gene-SNF32_10235;Name=SNF32_10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10235 JAXGFV010000021.1 Protein Homology CDS 12946 13056 . - 0 ID=cds-MDY4307556.1;Parent=gene-SNF32_10235;Dbxref=NCBI_GP:MDY4307556.1;Name=MDY4307556.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028245.3;locus_tag=SNF32_10235;product=putative holin-like toxin;protein_id=MDY4307556.1;transl_table=11 JAXGFV010000021.1 Genbank gene 14719 14901 . - . ID=gene-SNF32_10240;Name=SNF32_10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10240 JAXGFV010000021.1 GeneMarkS-2+ CDS 14719 14901 . - 0 ID=cds-MDY4307557.1;Parent=gene-SNF32_10240;Dbxref=NCBI_GP:MDY4307557.1;Name=MDY4307557.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10240;product=hypothetical protein;protein_id=MDY4307557.1;transl_table=11 JAXGFV010000021.1 Genbank gene 15052 15603 . - . ID=gene-SNF32_10245;Name=SNF32_10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10245 JAXGFV010000021.1 Protein Homology CDS 15052 15603 . - 0 ID=cds-MDY4307558.1;Parent=gene-SNF32_10245;Dbxref=NCBI_GP:MDY4307558.1;Name=MDY4307558.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736196.1;locus_tag=SNF32_10245;product=isochorismatase family cysteine hydrolase;protein_id=MDY4307558.1;transl_table=11 JAXGFV010000021.1 Genbank gene 15616 16308 . - . ID=gene-SNF32_10250;Name=SNF32_10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10250 JAXGFV010000021.1 Protein Homology CDS 15616 16308 . - 0 ID=cds-MDY4307559.1;Parent=gene-SNF32_10250;Dbxref=NCBI_GP:MDY4307559.1;Name=MDY4307559.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736197.1;locus_tag=SNF32_10250;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=MDY4307559.1;transl_table=11 JAXGFV010000021.1 Genbank pseudogene 16326 16607 . - . ID=gene-SNF32_10255;Name=macP;gbkey=Gene;gene=macP;gene_biotype=pseudogene;locus_tag=SNF32_10255;pseudo=true JAXGFV010000021.1 Protein Homology CDS 16326 16607 . - 0 ID=cds-SNF32_10255;Parent=gene-SNF32_10255;Note=frameshifted;gbkey=CDS;gene=macP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002291219.1;locus_tag=SNF32_10255;product=cell wall synthase accessory phosphoprotein MacP;pseudo=true;transl_table=11 JAXGFV010000021.1 Genbank gene 16620 17183 . - . ID=gene-SNF32_10260;Name=SNF32_10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10260 JAXGFV010000021.1 Protein Homology CDS 16620 17183 . - 0 ID=cds-MDY4307560.1;Parent=gene-SNF32_10260;Dbxref=NCBI_GP:MDY4307560.1;Name=MDY4307560.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002330027.1;locus_tag=SNF32_10260;product=NUDIX hydrolase;protein_id=MDY4307560.1;transl_table=11 JAXGFV010000021.1 Genbank pseudogene 17399 18052 . + . ID=gene-SNF32_10265;Name=SNF32_10265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10265;pseudo=true JAXGFV010000021.1 Protein Homology CDS 17399 18052 . + 0 ID=cds-SNF32_10265;Parent=gene-SNF32_10265;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736200.1;locus_tag=SNF32_10265;product=5-bromo-4-chloroindolyl phosphate hydrolysis family protein;pseudo=true;transl_table=11 JAXGFV010000021.1 Genbank pseudogene 18142 19337 . + . ID=gene-SNF32_10270;Name=SNF32_10270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10270;pseudo=true JAXGFV010000021.1 Protein Homology CDS 18142 19337 . + 0 ID=cds-SNF32_10270;Parent=gene-SNF32_10270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002339113.1;locus_tag=SNF32_10270;product=toxic anion resistance protein;pseudo=true;transl_table=11 JAXGFV010000021.1 Genbank pseudogene 19392 20775 . - . ID=gene-SNF32_10275;Name=SNF32_10275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10275;pseudo=true JAXGFV010000021.1 Protein Homology CDS 19392 20775 . - 0 ID=cds-SNF32_10275;Parent=gene-SNF32_10275;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003128482.1;locus_tag=SNF32_10275;product=amino acid permease;pseudo=true;transl_table=11 JAXGFV010000021.1 Genbank pseudogene 20819 21683 . - . ID=gene-SNF32_10280;Name=SNF32_10280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10280;pseudo=true JAXGFV010000021.1 Protein Homology CDS 20819 21683 . - 0 ID=cds-SNF32_10280;Parent=gene-SNF32_10280;Note=frameshifted;Ontology_term=GO:0034219,GO:0015144,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010750386.1;locus_tag=SNF32_10280;product=GRP family sugar transporter;pseudo=true;transl_table=11 JAXGFV010000021.1 Genbank pseudogene 22012 23032 . - . ID=gene-SNF32_10285;Name=SNF32_10285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10285;pseudo=true JAXGFV010000021.1 Protein Homology CDS 22012 23032 . - 0 ID=cds-SNF32_10285;Parent=gene-SNF32_10285;Note=frameshifted;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002374966.1;locus_tag=SNF32_10285;product=sensor histidine kinase;pseudo=true;transl_table=11 JAXGFV010000021.1 Genbank gene 23050 23724 . - . ID=gene-SNF32_10290;Name=SNF32_10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10290 JAXGFV010000021.1 Protein Homology CDS 23050 23724 . - 0 ID=cds-MDY4307561.1;Parent=gene-SNF32_10290;Dbxref=NCBI_GP:MDY4307561.1;Name=MDY4307561.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003128479.1;locus_tag=SNF32_10290;product=response regulator transcription factor;protein_id=MDY4307561.1;transl_table=11 JAXGFV010000021.1 Genbank gene 24343 25176 . + . ID=gene-SNF32_10295;Name=SNF32_10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10295 JAXGFV010000021.1 Protein Homology CDS 24343 25176 . + 0 ID=cds-MDY4307562.1;Parent=gene-SNF32_10295;Dbxref=NCBI_GP:MDY4307562.1;Name=MDY4307562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724163.1;locus_tag=SNF32_10295;product=manganese catalase family protein;protein_id=MDY4307562.1;transl_table=11 JAXGFV010000021.1 Genbank pseudogene 25222 25426 . - . ID=gene-SNF32_10300;Name=SNF32_10300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10300;pseudo=true JAXGFV010000021.1 Protein Homology CDS 25222 25426 . - 0 ID=cds-SNF32_10300;Parent=gene-SNF32_10300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002308156.1;locus_tag=SNF32_10300;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000021.1 Genbank gene 25617 26075 . - . ID=gene-SNF32_10305;Name=SNF32_10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10305 JAXGFV010000021.1 Protein Homology CDS 25617 26075 . - 0 ID=cds-MDY4307563.1;Parent=gene-SNF32_10305;Dbxref=NCBI_GP:MDY4307563.1;Name=MDY4307563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016853090.1;locus_tag=SNF32_10305;product=ArgR family transcriptional regulator;protein_id=MDY4307563.1;transl_table=11 JAXGFV010000021.1 Genbank pseudogene 26171 26808 . - . ID=gene-SNF32_10310;Name=SNF32_10310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10310;pseudo=true JAXGFV010000021.1 Protein Homology CDS 26171 26808 . - 0 ID=cds-SNF32_10310;Parent=gene-SNF32_10310;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002323573.1;locus_tag=SNF32_10310;product=GyrI-like domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000021.1 Genbank gene 26983 27390 . + . ID=gene-SNF32_10315;Name=SNF32_10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10315 JAXGFV010000021.1 Protein Homology CDS 26983 27390 . + 0 ID=cds-MDY4307564.1;Parent=gene-SNF32_10315;Dbxref=NCBI_GP:MDY4307564.1;Name=MDY4307564.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012312.3;locus_tag=SNF32_10315;product=MFS transporter;protein_id=MDY4307564.1;transl_table=11 JAXGFV010000021.1 Genbank gene 27387 28259 . + . ID=gene-SNF32_10320;Name=SNF32_10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10320 JAXGFV010000021.1 Protein Homology CDS 27387 28259 . + 0 ID=cds-MDY4307565.1;Parent=gene-SNF32_10320;Dbxref=NCBI_GP:MDY4307565.1;Name=MDY4307565.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.3;locus_tag=SNF32_10320;product=MFS transporter;protein_id=MDY4307565.1;transl_table=11 JAXGFV010000021.1 Genbank pseudogene 28545 29639 . + . ID=gene-SNF32_10325;Name=SNF32_10325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10325;pseudo=true JAXGFV010000021.1 Protein Homology CDS 28545 29639 . + 0 ID=cds-SNF32_10325;Parent=gene-SNF32_10325;Note=frameshifted;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736212.1;locus_tag=SNF32_10325;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11 JAXGFV010000021.1 Genbank gene 29703 30311 . - . ID=gene-SNF32_10330;Name=SNF32_10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10330 JAXGFV010000021.1 Protein Homology CDS 29703 30311 . - 0 ID=cds-MDY4307566.1;Parent=gene-SNF32_10330;Dbxref=NCBI_GP:MDY4307566.1;Name=MDY4307566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002308148.1;locus_tag=SNF32_10330;product=LysM peptidoglycan-binding domain-containing protein;protein_id=MDY4307566.1;transl_table=11 JAXGFV010000021.1 Genbank gene 30563 31849 . - . ID=gene-SNF32_10335;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=SNF32_10335 JAXGFV010000021.1 Protein Homology CDS 30563 31849 . - 0 ID=cds-MDY4307567.1;Parent=gene-SNF32_10335;Dbxref=NCBI_GP:MDY4307567.1;Name=MDY4307567.1;Ontology_term=GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002345381.1;locus_tag=SNF32_10335;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=MDY4307567.1;transl_table=11 JAXGFV010000021.1 Genbank pseudogene 31865 32608 . - . ID=gene-SNF32_10340;Name=SNF32_10340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10340;pseudo=true JAXGFV010000021.1 Protein Homology CDS 31865 32608 . - 0 ID=cds-SNF32_10340;Parent=gene-SNF32_10340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723138.1;locus_tag=SNF32_10340;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000021.1 Genbank pseudogene 32882 33785 . - . ID=gene-SNF32_10345;Name=SNF32_10345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10345;pseudo=true JAXGFV010000021.1 Protein Homology CDS 32882 33785 . - 0 ID=cds-SNF32_10345;Parent=gene-SNF32_10345;Note=frameshifted;Ontology_term=GO:0030001,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010768578.1;locus_tag=SNF32_10345;product=metal ABC transporter substrate-binding protein;pseudo=true;transl_table=11 JAXGFV010000021.1 Genbank pseudogene 33837 34698 . - . ID=gene-SNF32_10350;Name=SNF32_10350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10350;pseudo=true JAXGFV010000021.1 Protein Homology CDS 33837 34698 . - 0 ID=cds-SNF32_10350;Parent=gene-SNF32_10350;Note=frameshifted;Ontology_term=GO:0030001,GO:0055085,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002377718.1;locus_tag=SNF32_10350;product=metal ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000021.1 Genbank pseudogene 34695 35439 . - . ID=gene-SNF32_10355;Name=SNF32_10355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10355;pseudo=true JAXGFV010000021.1 Protein Homology CDS 34695 35439 . - 0 ID=cds-SNF32_10355;Parent=gene-SNF32_10355;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002349238.1;locus_tag=SNF32_10355;product=metal ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000021.1 Genbank pseudogene 35679 37045 . + . ID=gene-SNF32_10360;Name=SNF32_10360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10360;pseudo=true JAXGFV010000021.1 Protein Homology CDS 35679 37045 . + 0 ID=cds-SNF32_10360;Parent=gene-SNF32_10360;Note=frameshifted;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002297903.1;locus_tag=SNF32_10360;product=amino acid permease;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000022.1 1 35538 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000022.1 Genbank region 1 35538 . + . ID=JAXGFV010000022.1:1..35538;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000022.1 Genbank pseudogene 474 952 . - . ID=gene-SNF32_10365;Name=SNF32_10365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10365;pseudo=true JAXGFV010000022.1 Protein Homology CDS 474 952 . - 0 ID=cds-SNF32_10365;Parent=gene-SNF32_10365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002377789.1;locus_tag=SNF32_10365;product=ArgR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000022.1 Genbank pseudogene 1322 2103 . + . ID=gene-SNF32_10370;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=pseudogene;locus_tag=SNF32_10370;pseudo=true JAXGFV010000022.1 Protein Homology CDS 1322 2103 . + 0 ID=cds-SNF32_10370;Parent=gene-SNF32_10370;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875940.1;locus_tag=SNF32_10370;product=30S ribosomal protein S2;pseudo=true;transl_table=11 JAXGFV010000022.1 Genbank pseudogene 2203 3074 . + . ID=gene-SNF32_10375;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=pseudogene;locus_tag=SNF32_10375;pseudo=true JAXGFV010000022.1 Protein Homology CDS 2203 3074 . + 0 ID=cds-SNF32_10375;Parent=gene-SNF32_10375;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006309576.1;locus_tag=SNF32_10375;product=translation elongation factor Ts;pseudo=true;transl_table=11 JAXGFV010000022.1 Genbank gene 3313 4035 . + . ID=gene-SNF32_10380;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=SNF32_10380 JAXGFV010000022.1 Protein Homology CDS 3313 4035 . + 0 ID=cds-MDY4307568.1;Parent=gene-SNF32_10380;Dbxref=NCBI_GP:MDY4307568.1;Name=MDY4307568.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875937.1;locus_tag=SNF32_10380;product=UMP kinase;protein_id=MDY4307568.1;transl_table=11 JAXGFV010000022.1 Genbank pseudogene 4039 4594 . + . ID=gene-SNF32_10385;Name=frr;gbkey=Gene;gene=frr;gene_biotype=pseudogene;locus_tag=SNF32_10385;pseudo=true JAXGFV010000022.1 Protein Homology CDS 4039 4594 . + 0 ID=cds-SNF32_10385;Parent=gene-SNF32_10385;Note=frameshifted;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010752136.1;locus_tag=SNF32_10385;product=ribosome recycling factor;pseudo=true;transl_table=11 JAXGFV010000022.1 Genbank gene 4871 5098 . + . ID=gene-SNF32_10390;Name=SNF32_10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10390 JAXGFV010000022.1 Protein Homology CDS 4871 5098 . + 0 ID=cds-MDY4307569.1;Parent=gene-SNF32_10390;Dbxref=NCBI_GP:MDY4307569.1;Name=MDY4307569.1;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: protein motif:HMM:TIGR00055.1;locus_tag=SNF32_10390;product=undecaprenyl diphosphate synthase family protein;protein_id=MDY4307569.1;transl_table=11 JAXGFV010000022.1 Genbank gene 5020 5577 . + . ID=gene-SNF32_10395;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=SNF32_10395 JAXGFV010000022.1 Protein Homology CDS 5020 5577 . + 0 ID=cds-MDY4307570.1;Parent=gene-SNF32_10395;Dbxref=NCBI_GP:MDY4307570.1;Name=MDY4307570.1;Ontology_term=GO:0009252,GO:0005737;gbkey=CDS;gene=uppS;go_component=cytoplasm|0005737||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: protein motif:HMM:TIGR00055.1;locus_tag=SNF32_10395;product=polyprenyl diphosphate synthase;protein_id=MDY4307570.1;transl_table=11 JAXGFV010000022.1 Genbank pseudogene 5574 6373 . + . ID=gene-SNF32_10400;Name=SNF32_10400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10400;pseudo=true JAXGFV010000022.1 Protein Homology CDS 5574 6373 . + 0 ID=cds-SNF32_10400;Parent=gene-SNF32_10400;Note=frameshifted;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002294135.1;locus_tag=SNF32_10400;product=phosphatidate cytidylyltransferase;pseudo=true;transl_table=11 JAXGFV010000022.1 Genbank pseudogene 6572 7839 . + . ID=gene-SNF32_10405;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=pseudogene;locus_tag=SNF32_10405;pseudo=true JAXGFV010000022.1 Protein Homology CDS 6572 7839 . + 0 ID=cds-SNF32_10405;Parent=gene-SNF32_10405;Note=frameshifted;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002306441.1;locus_tag=SNF32_10405;product=RIP metalloprotease RseP;pseudo=true;transl_table=11 JAXGFV010000022.1 Genbank pseudogene 7897 9599 . + . ID=gene-SNF32_10410;Name=SNF32_10410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10410;pseudo=true JAXGFV010000022.1 Protein Homology CDS 7897 9599 . + 0 ID=cds-SNF32_10410;Parent=gene-SNF32_10410;Note=frameshifted;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA editing activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723221.1;locus_tag=SNF32_10410;product=proline--tRNA ligase;pseudo=true;transl_table=11 JAXGFV010000022.1 Genbank pseudogene 10001 14348 . + . ID=gene-SNF32_10415;Name=SNF32_10415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10415;pseudo=true JAXGFV010000022.1 Protein Homology CDS 10001 14348 . + 0 ID=cds-SNF32_10415;Parent=gene-SNF32_10415;Note=frameshifted;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002308901.1;locus_tag=SNF32_10415;product=PolC-type DNA polymerase III;pseudo=true;transl_table=11 JAXGFV010000022.1 Genbank pseudogene 14554 15025 . + . ID=gene-SNF32_10420;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=pseudogene;locus_tag=SNF32_10420;pseudo=true JAXGFV010000022.1 Protein Homology CDS 14554 15025 . + 0 ID=cds-SNF32_10420;Parent=gene-SNF32_10420;Note=frameshifted;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016625399.1;locus_tag=SNF32_10420;product=ribosome maturation factor RimP;pseudo=true;transl_table=11 JAXGFV010000022.1 Genbank pseudogene 15047 16232 . + . ID=gene-SNF32_10425;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=pseudogene;locus_tag=SNF32_10425;pseudo=true JAXGFV010000022.1 Protein Homology CDS 15047 16232 . + 0 ID=cds-SNF32_10425;Parent=gene-SNF32_10425;Note=frameshifted;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735194.1;locus_tag=SNF32_10425;product=transcription termination factor NusA;pseudo=true;transl_table=11 JAXGFV010000022.1 Genbank pseudogene 16256 16548 . + . ID=gene-SNF32_10430;Name=SNF32_10430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10430;pseudo=true JAXGFV010000022.1 Protein Homology CDS 16256 16548 . + 0 ID=cds-SNF32_10430;Parent=gene-SNF32_10430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875920.1;locus_tag=SNF32_10430;product=YlxR family protein;pseudo=true;transl_table=11 JAXGFV010000022.1 Genbank pseudogene 16545 16843 . + . ID=gene-SNF32_10435;Name=SNF32_10435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10435;pseudo=true JAXGFV010000022.1 Protein Homology CDS 16545 16843 . + 0 ID=cds-SNF32_10435;Parent=gene-SNF32_10435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002344352.1;locus_tag=SNF32_10435;product=YlxQ-related RNA-binding protein;pseudo=true;transl_table=11 JAXGFV010000022.1 Genbank pseudogene 16867 19311 . + . ID=gene-SNF32_10440;Name=infB;gbkey=Gene;gene=infB;gene_biotype=pseudogene;locus_tag=SNF32_10440;pseudo=true JAXGFV010000022.1 Protein Homology CDS 16867 19311 . + 0 ID=cds-SNF32_10440;Parent=gene-SNF32_10440;Note=frameshifted;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002297399.1;locus_tag=SNF32_10440;product=translation initiation factor IF-2;pseudo=true;transl_table=11 JAXGFV010000022.1 Genbank pseudogene 19335 19680 . + . ID=gene-SNF32_10445;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=pseudogene;locus_tag=SNF32_10445;pseudo=true JAXGFV010000022.1 Protein Homology CDS 19335 19680 . + 0 ID=cds-SNF32_10445;Parent=gene-SNF32_10445;Note=frameshifted;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735198.1;locus_tag=SNF32_10445;product=30S ribosome-binding factor RbfA;pseudo=true;transl_table=11 JAXGFV010000022.1 Genbank pseudogene 20187 21108 . + . ID=gene-SNF32_10450;Name=truB;gbkey=Gene;gene=truB;gene_biotype=pseudogene;locus_tag=SNF32_10450;pseudo=true JAXGFV010000022.1 Protein Homology CDS 20187 21108 . + 0 ID=cds-SNF32_10450;Parent=gene-SNF32_10450;Note=frameshifted;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737772.1;locus_tag=SNF32_10450;product=tRNA pseudouridine(55) synthase TruB;pseudo=true;transl_table=11 JAXGFV010000022.1 Genbank pseudogene 21116 22066 . + . ID=gene-SNF32_10455;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=pseudogene;locus_tag=SNF32_10455;pseudo=true JAXGFV010000022.1 Protein Homology CDS 21116 22066 . + 0 ID=cds-SNF32_10455;Parent=gene-SNF32_10455;Note=frameshifted;Ontology_term=GO:0006747,GO:0009398,GO:0003919,GO:0005737;gbkey=CDS;gene=ribF;go_component=cytoplasm|0005737||IEA;go_function=FMN adenylyltransferase activity|0003919||IEA;go_process=FAD biosynthetic process|0006747||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010748099.1;locus_tag=SNF32_10455;product=riboflavin biosynthesis protein RibF;pseudo=true;transl_table=11 JAXGFV010000022.1 Genbank pseudogene 22247 23031 . + . ID=gene-SNF32_10460;Name=SNF32_10460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10460;pseudo=true JAXGFV010000022.1 Protein Homology CDS 22247 23031 . + 0 ID=cds-SNF32_10460;Parent=gene-SNF32_10460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002340778.1;locus_tag=SNF32_10460;product=glucose-1-dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000022.1 Genbank pseudogene 23042 23891 . + . ID=gene-SNF32_10465;Name=SNF32_10465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10465;pseudo=true JAXGFV010000022.1 Protein Homology CDS 23042 23891 . + 0 ID=cds-SNF32_10465;Parent=gene-SNF32_10465;Note=frameshifted;Ontology_term=GO:0034219,GO:0015144,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002288523.1;locus_tag=SNF32_10465;product=GRP family sugar transporter;pseudo=true;transl_table=11 JAXGFV010000022.1 Genbank gene 24059 24397 . - . ID=gene-SNF32_10470;Name=SNF32_10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10470 JAXGFV010000022.1 Protein Homology CDS 24059 24397 . - 0 ID=cds-MDY4307571.1;Parent=gene-SNF32_10470;Dbxref=NCBI_GP:MDY4307571.1;Name=MDY4307571.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024139.3;locus_tag=SNF32_10470;product=helix-turn-helix domain-containing protein;protein_id=MDY4307571.1;transl_table=11 JAXGFV010000022.1 Genbank gene 25549 25755 . + . ID=gene-SNF32_10475;Name=SNF32_10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10475 JAXGFV010000022.1 GeneMarkS-2+ CDS 25549 25755 . + 0 ID=cds-MDY4307572.1;Parent=gene-SNF32_10475;Dbxref=NCBI_GP:MDY4307572.1;Name=MDY4307572.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10475;product=PqqD family peptide modification chaperone;protein_id=MDY4307572.1;transl_table=11 JAXGFV010000022.1 Genbank gene 26409 26810 . + . ID=gene-SNF32_10480;Name=SNF32_10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10480 JAXGFV010000022.1 Protein Homology CDS 26409 26810 . + 0 ID=cds-MDY4307573.1;Parent=gene-SNF32_10480;Dbxref=NCBI_GP:MDY4307573.1;Name=MDY4307573.1;Ontology_term=GO:0006096;gbkey=CDS;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: protein motif:HMM:NF012585.3;locus_tag=SNF32_10480;product=6-phosphofructokinase;protein_id=MDY4307573.1;transl_table=11 JAXGFV010000022.1 Genbank gene 26964 27242 . + . ID=gene-SNF32_10485;Name=SNF32_10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10485 JAXGFV010000022.1 GeneMarkS-2+ CDS 26964 27242 . + 0 ID=cds-MDY4307574.1;Parent=gene-SNF32_10485;Dbxref=NCBI_GP:MDY4307574.1;Name=MDY4307574.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10485;product=hypothetical protein;protein_id=MDY4307574.1;transl_table=11 JAXGFV010000022.1 Genbank gene 27781 28053 . + . ID=gene-SNF32_10490;Name=SNF32_10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10490 JAXGFV010000022.1 Protein Homology CDS 27781 28053 . + 0 ID=cds-MDY4307575.1;Parent=gene-SNF32_10490;Dbxref=NCBI_GP:MDY4307575.1;Name=MDY4307575.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024768.3;locus_tag=SNF32_10490;product=hypothetical protein;protein_id=MDY4307575.1;transl_table=11 JAXGFV010000022.1 Genbank gene 28139 28465 . + . ID=gene-SNF32_10495;Name=SNF32_10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10495 JAXGFV010000022.1 Protein Homology CDS 28139 28465 . + 0 ID=cds-MDY4307576.1;Parent=gene-SNF32_10495;Dbxref=NCBI_GP:MDY4307576.1;Name=MDY4307576.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013662.3;locus_tag=SNF32_10495;product=hypothetical protein;protein_id=MDY4307576.1;transl_table=11 JAXGFV010000022.1 Genbank gene 28431 28634 . + . ID=gene-SNF32_10500;Name=SNF32_10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10500 JAXGFV010000022.1 GeneMarkS-2+ CDS 28431 28634 . + 0 ID=cds-MDY4307577.1;Parent=gene-SNF32_10500;Dbxref=NCBI_GP:MDY4307577.1;Name=MDY4307577.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10500;product=hypothetical protein;protein_id=MDY4307577.1;transl_table=11 JAXGFV010000022.1 Genbank gene 28640 29071 . + . ID=gene-SNF32_10505;Name=SNF32_10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10505 JAXGFV010000022.1 Protein Homology CDS 28640 29071 . + 0 ID=cds-MDY4307578.1;Parent=gene-SNF32_10505;Dbxref=NCBI_GP:MDY4307578.1;Name=MDY4307578.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024634.3;locus_tag=SNF32_10505;product=4Fe-4S dicluster domain-containing protein;protein_id=MDY4307578.1;transl_table=11 JAXGFV010000022.1 Genbank gene 29087 29560 . + . ID=gene-SNF32_10510;Name=SNF32_10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10510 JAXGFV010000022.1 Protein Homology CDS 29087 29560 . + 0 ID=cds-MDY4307579.1;Parent=gene-SNF32_10510;Dbxref=NCBI_GP:MDY4307579.1;Name=MDY4307579.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015100.3;locus_tag=SNF32_10510;product=RnfABCDGE type electron transport complex subunit D;protein_id=MDY4307579.1;transl_table=11 JAXGFV010000022.1 Genbank gene 29449 29979 . + . ID=gene-SNF32_10515;Name=SNF32_10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10515 JAXGFV010000022.1 Protein Homology CDS 29449 29979 . + 0 ID=cds-MDY4307580.1;Parent=gene-SNF32_10515;Dbxref=NCBI_GP:MDY4307580.1;Name=MDY4307580.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015100.3;locus_tag=SNF32_10515;product=RnfABCDGE type electron transport complex subunit D;protein_id=MDY4307580.1;transl_table=11 JAXGFV010000022.1 Genbank gene 30483 31223 . + . ID=gene-SNF32_10520;Name=SNF32_10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10520 JAXGFV010000022.1 Protein Homology CDS 30483 31223 . + 0 ID=cds-MDY4307581.1;Parent=gene-SNF32_10520;Dbxref=NCBI_GP:MDY4307581.1;Name=MDY4307581.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024120.3;locus_tag=SNF32_10520;product=glycosyl hydrolase family 28-related protein;protein_id=MDY4307581.1;transl_table=11 JAXGFV010000022.1 Genbank gene 31217 32044 . + . ID=gene-SNF32_10525;Name=SNF32_10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10525 JAXGFV010000022.1 GeneMarkS-2+ CDS 31217 32044 . + 0 ID=cds-MDY4307582.1;Parent=gene-SNF32_10525;Dbxref=NCBI_GP:MDY4307582.1;Name=MDY4307582.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10525;product=hypothetical protein;protein_id=MDY4307582.1;transl_table=11 JAXGFV010000022.1 Genbank gene 33973 34200 . - . ID=gene-SNF32_10530;Name=SNF32_10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10530 JAXGFV010000022.1 GeneMarkS-2+ CDS 33973 34200 . - 0 ID=cds-MDY4307583.1;Parent=gene-SNF32_10530;Dbxref=NCBI_GP:MDY4307583.1;Name=MDY4307583.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10530;product=hypothetical protein;protein_id=MDY4307583.1;transl_table=11 JAXGFV010000022.1 Genbank gene 34412 34615 . - . ID=gene-SNF32_10535;Name=SNF32_10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10535 JAXGFV010000022.1 GeneMarkS-2+ CDS 34412 34615 . - 0 ID=cds-MDY4307584.1;Parent=gene-SNF32_10535;Dbxref=NCBI_GP:MDY4307584.1;Name=MDY4307584.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10535;product=hypothetical protein;protein_id=MDY4307584.1;transl_table=11 JAXGFV010000022.1 Genbank pseudogene 34968 35409 . + . ID=gene-SNF32_10540;Name=SNF32_10540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10540;pseudo=true JAXGFV010000022.1 Protein Homology CDS 34968 35409 . + 0 ID=cds-SNF32_10540;Parent=gene-SNF32_10540;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558257.1;locus_tag=SNF32_10540;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000023.1 1 33959 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000023.1 Genbank region 1 33959 . + . ID=JAXGFV010000023.1:1..33959;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000023.1 Genbank pseudogene 1 959 . + . ID=gene-SNF32_10545;Name=fni;gbkey=Gene;gene=fni;gene_biotype=pseudogene;locus_tag=SNF32_10545;pseudo=true JAXGFV010000023.1 Protein Homology CDS 1 959 . + 0 ID=cds-SNF32_10545;Parent=gene-SNF32_10545;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=fni;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736575.1;locus_tag=SNF32_10545;product=type 2 isopentenyl-diphosphate Delta-isomerase;pseudo=true;transl_table=11 JAXGFV010000023.1 Genbank pseudogene 1001 1803 . - . ID=gene-SNF32_10550;Name=SNF32_10550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10550;pseudo=true JAXGFV010000023.1 Protein Homology CDS 1001 1803 . - 0 ID=cds-SNF32_10550;Parent=gene-SNF32_10550;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010741490.1;locus_tag=SNF32_10550;product=gluconate 5-dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000023.1 Genbank gene 1819 2661 . - . ID=gene-SNF32_10555;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=SNF32_10555 JAXGFV010000023.1 Protein Homology CDS 1819 2661 . - 0 ID=cds-MDY4307585.1;Parent=gene-SNF32_10555;Dbxref=NCBI_GP:MDY4307585.1;Name=MDY4307585.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722412.1;locus_tag=SNF32_10555;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=MDY4307585.1;transl_table=11 JAXGFV010000023.1 Genbank pseudogene 2689 3683 . - . ID=gene-SNF32_10560;Name=SNF32_10560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10560;pseudo=true JAXGFV010000023.1 Protein Homology CDS 2689 3683 . - 0 ID=cds-SNF32_10560;Parent=gene-SNF32_10560;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002331990.1;locus_tag=SNF32_10560;product=sugar kinase;pseudo=true;transl_table=11 JAXGFV010000023.1 Genbank gene 3690 4325 . - . ID=gene-SNF32_10565;Name=SNF32_10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10565 JAXGFV010000023.1 Protein Homology CDS 3690 4325 . - 0 ID=cds-MDY4307586.1;Parent=gene-SNF32_10565;Dbxref=NCBI_GP:MDY4307586.1;Name=MDY4307586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005877918.1;locus_tag=SNF32_10565;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=MDY4307586.1;transl_table=11 JAXGFV010000023.1 Genbank pseudogene 4426 5184 . - . ID=gene-SNF32_10570;Name=SNF32_10570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10570;pseudo=true JAXGFV010000023.1 Protein Homology CDS 4426 5184 . - 0 ID=cds-SNF32_10570;Parent=gene-SNF32_10570;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736580.1;locus_tag=SNF32_10570;product=IclR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000023.1 Genbank pseudogene 5236 6144 . - . ID=gene-SNF32_10575;Name=SNF32_10575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10575;pseudo=true JAXGFV010000023.1 Protein Homology CDS 5236 6144 . - 0 ID=cds-SNF32_10575;Parent=gene-SNF32_10575;Note=frameshifted;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002293388.1;locus_tag=SNF32_10575;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000023.1 Genbank pseudogene 6202 7043 . - . ID=gene-SNF32_10580;Name=SNF32_10580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10580;pseudo=true JAXGFV010000023.1 Protein Homology CDS 6202 7043 . - 0 ID=cds-SNF32_10580;Parent=gene-SNF32_10580;Note=frameshifted;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736582.1;locus_tag=SNF32_10580;product=sugar phosphate isomerase/epimerase family protein;pseudo=true;transl_table=11 JAXGFV010000023.1 Genbank pseudogene 7054 8345 . - . ID=gene-SNF32_10585;Name=SNF32_10585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10585;pseudo=true JAXGFV010000023.1 Protein Homology CDS 7054 8345 . - 0 ID=cds-SNF32_10585;Parent=gene-SNF32_10585;Note=frameshifted;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016179737.1;locus_tag=SNF32_10585;product=TRAP transporter large permease;pseudo=true;transl_table=11 JAXGFV010000023.1 Genbank pseudogene 8356 8777 . - . ID=gene-SNF32_10590;Name=SNF32_10590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10590;pseudo=true JAXGFV010000023.1 Protein Homology CDS 8356 8777 . - 0 ID=cds-SNF32_10590;Parent=gene-SNF32_10590;Note=frameshifted;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736585.1;locus_tag=SNF32_10590;product=TRAP transporter small permease;pseudo=true;transl_table=11 JAXGFV010000023.1 Genbank pseudogene 8837 9902 . - . ID=gene-SNF32_10595;Name=SNF32_10595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10595;pseudo=true JAXGFV010000023.1 Protein Homology CDS 8837 9902 . - 0 ID=cds-SNF32_10595;Parent=gene-SNF32_10595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722418.1;locus_tag=SNF32_10595;product=TRAP transporter substrate-binding protein;pseudo=true;transl_table=11 JAXGFV010000023.1 Genbank gene 9869 10975 . - . ID=gene-SNF32_10600;Name=SNF32_10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10600 JAXGFV010000023.1 Protein Homology CDS 9869 10975 . - 0 ID=cds-MDY4307587.1;Parent=gene-SNF32_10600;Dbxref=NCBI_GP:MDY4307587.1;Name=MDY4307587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629839.1;locus_tag=SNF32_10600;product=glycoside hydrolase family 88 protein;protein_id=MDY4307587.1;transl_table=11 JAXGFV010000023.1 Genbank gene 11151 11426 . - . ID=gene-SNF32_10605;Name=SNF32_10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10605 JAXGFV010000023.1 Protein Homology CDS 11151 11426 . - 0 ID=cds-MDY4307588.1;Parent=gene-SNF32_10605;Dbxref=NCBI_GP:MDY4307588.1;Name=MDY4307588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005876656.1;locus_tag=SNF32_10605;product=hypothetical protein;protein_id=MDY4307588.1;transl_table=11 JAXGFV010000023.1 Genbank pseudogene 11702 14293 . - . ID=gene-SNF32_10610;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=pseudogene;gene_synonym=adhC;locus_tag=SNF32_10610;pseudo=true JAXGFV010000023.1 Protein Homology CDS 11702 14293 . - 0 ID=cds-SNF32_10610;Parent=gene-SNF32_10610;Note=frameshifted;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722420.1;locus_tag=SNF32_10610;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000023.1 Genbank gene 14605 14982 . - . ID=gene-SNF32_10615;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=SNF32_10615 JAXGFV010000023.1 Protein Homology CDS 14605 14982 . - 0 ID=cds-MDY4307589.1;Parent=gene-SNF32_10615;Dbxref=NCBI_GP:MDY4307589.1;Name=MDY4307589.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736590.1;locus_tag=SNF32_10615;product=preprotein translocase subunit YajC;protein_id=MDY4307589.1;transl_table=11 JAXGFV010000023.1 Genbank pseudogene 15075 16218 . - . ID=gene-SNF32_10620;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=pseudogene;locus_tag=SNF32_10620;pseudo=true JAXGFV010000023.1 Protein Homology CDS 15075 16218 . - 0 ID=cds-SNF32_10620;Parent=gene-SNF32_10620;Note=frameshifted;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010720296.1;locus_tag=SNF32_10620;product=tRNA guanosine(34) transglycosylase Tgt;pseudo=true;transl_table=11 JAXGFV010000023.1 Genbank gene 16422 17114 . + . ID=gene-SNF32_10625;Name=SNF32_10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10625 JAXGFV010000023.1 Protein Homology CDS 16422 17114 . + 0 ID=cds-MDY4307590.1;Parent=gene-SNF32_10625;Dbxref=NCBI_GP:MDY4307590.1;Name=MDY4307590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002293400.1;locus_tag=SNF32_10625;product=DUF975 family protein;protein_id=MDY4307590.1;transl_table=11 JAXGFV010000023.1 Genbank pseudogene 17177 19809 . - . ID=gene-SNF32_10630;Name=SNF32_10630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10630;pseudo=true JAXGFV010000023.1 Protein Homology CDS 17177 19809 . - 0 ID=cds-SNF32_10630;Parent=gene-SNF32_10630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736593.1;locus_tag=SNF32_10630;product=cation-translocating P-type ATPase;pseudo=true;transl_table=11 JAXGFV010000023.1 Genbank pseudogene 20396 21425 . - . ID=gene-SNF32_10635;Name=queA;gbkey=Gene;gene=queA;gene_biotype=pseudogene;locus_tag=SNF32_10635;pseudo=true JAXGFV010000023.1 Protein Homology CDS 20396 21425 . - 0 ID=cds-SNF32_10635;Parent=gene-SNF32_10635;Note=frameshifted;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177243.1;locus_tag=SNF32_10635;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;pseudo=true;transl_table=11 JAXGFV010000023.1 Genbank gene 21686 22855 . + . ID=gene-SNF32_10640;Name=SNF32_10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10640 JAXGFV010000023.1 Protein Homology CDS 21686 22855 . + 0 ID=cds-MDY4307591.1;Parent=gene-SNF32_10640;Dbxref=NCBI_GP:MDY4307591.1;Name=MDY4307591.1;Note=Members of the family are the ATP-binding subunit of ABC transporters for substrates such as betaine%2C L-proline or other amino acids%2C choline%2C carnitine%2C etc. The substrate specificity is best determined from the substrate-binding subunit%2C rather than this subunit%2C as it interacts with the permease subunit and not with substrate directly.;Ontology_term=GO:0015837,GO:0005524,GO:0009898,GO:0043190;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005232177.1;locus_tag=SNF32_10640;product=betaine/proline/choline family ABC transporter ATP-binding protein;protein_id=MDY4307591.1;transl_table=11 JAXGFV010000023.1 Genbank pseudogene 22867 23498 . + . ID=gene-SNF32_10645;Name=SNF32_10645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10645;pseudo=true JAXGFV010000023.1 Protein Homology CDS 22867 23498 . + 0 ID=cds-SNF32_10645;Parent=gene-SNF32_10645;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875373.1;locus_tag=SNF32_10645;product=ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000023.1 Genbank pseudogene 23495 24408 . + . ID=gene-SNF32_10650;Name=SNF32_10650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10650;pseudo=true JAXGFV010000023.1 Protein Homology CDS 23495 24408 . + 0 ID=cds-SNF32_10650;Parent=gene-SNF32_10650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016631476.1;locus_tag=SNF32_10650;product=osmoprotectant ABC transporter substrate-binding protein;pseudo=true;transl_table=11 JAXGFV010000023.1 Genbank gene 24405 25076 . + . ID=gene-SNF32_10655;Name=SNF32_10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10655 JAXGFV010000023.1 Protein Homology CDS 24405 25076 . + 0 ID=cds-MDY4307592.1;Parent=gene-SNF32_10655;Dbxref=NCBI_GP:MDY4307592.1;Name=MDY4307592.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002301116.1;locus_tag=SNF32_10655;product=ABC transporter permease;protein_id=MDY4307592.1;transl_table=11 JAXGFV010000023.1 Genbank pseudogene 25262 25629 . - . ID=gene-SNF32_10660;Name=SNF32_10660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10660;pseudo=true JAXGFV010000023.1 Protein Homology CDS 25262 25629 . - 0 ID=cds-SNF32_10660;Parent=gene-SNF32_10660;Note=frameshifted%3B internal stop;Ontology_term=GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722426.1;locus_tag=SNF32_10660;product=type II toxin-antitoxin system PemK/MazF family toxin;pseudo=true;transl_table=11 JAXGFV010000023.1 Genbank gene 25629 25847 . - . ID=gene-SNF32_10665;Name=SNF32_10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10665 JAXGFV010000023.1 Protein Homology CDS 25629 25847 . - 0 ID=cds-MDY4307593.1;Parent=gene-SNF32_10665;Dbxref=NCBI_GP:MDY4307593.1;Name=MDY4307593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736601.1;locus_tag=SNF32_10665;product=AbrB family transcriptional regulator;protein_id=MDY4307593.1;transl_table=11 JAXGFV010000023.1 Genbank pseudogene 25984 27831 . - . ID=gene-SNF32_10670;Name=SNF32_10670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10670;pseudo=true JAXGFV010000023.1 Protein Homology CDS 25984 27831 . - 0 ID=cds-SNF32_10670;Parent=gene-SNF32_10670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016922351.1;locus_tag=SNF32_10670;product=APC family permease;pseudo=true;transl_table=11 JAXGFV010000023.1 Genbank pseudogene 28128 30821 . - . ID=gene-SNF32_10675;Name=SNF32_10675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10675;pseudo=true JAXGFV010000023.1 Protein Homology CDS 28128 30821 . - 0 ID=cds-SNF32_10675;Parent=gene-SNF32_10675;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010769608.1;locus_tag=SNF32_10675;product=YhgE/Pip domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000023.1 Genbank pseudogene 31470 31831 . - . ID=gene-SNF32_10680;Name=SNF32_10680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10680;pseudo=true JAXGFV010000023.1 Protein Homology CDS 31470 31831 . - 0 ID=cds-SNF32_10680;Parent=gene-SNF32_10680;Note=frameshifted;Ontology_term=GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177238.1;locus_tag=SNF32_10680;product=type II toxin-antitoxin system PemK/MazF family toxin;pseudo=true;transl_table=11 JAXGFV010000023.1 Genbank pseudogene 31842 32957 . - . ID=gene-SNF32_10685;Name=alr;gbkey=Gene;gene=alr;gene_biotype=pseudogene;locus_tag=SNF32_10685;pseudo=true JAXGFV010000023.1 Protein Homology CDS 31842 32957 . - 0 ID=cds-SNF32_10685;Parent=gene-SNF32_10685;Note=frameshifted;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002296555.1;locus_tag=SNF32_10685;product=alanine racemase;pseudo=true;transl_table=11 JAXGFV010000023.1 Genbank gene 32973 33323 . - . ID=gene-SNF32_10690;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=SNF32_10690 JAXGFV010000023.1 Protein Homology CDS 32973 33323 . - 0 ID=cds-MDY4307594.1;Parent=gene-SNF32_10690;Dbxref=NCBI_GP:MDY4307594.1;Name=MDY4307594.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002293418.1;locus_tag=SNF32_10690;product=holo-ACP synthase;protein_id=MDY4307594.1;transl_table=11 ##sequence-region JAXGFV010000024.1 1 33840 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000024.1 Genbank region 1 33840 . + . ID=JAXGFV010000024.1:1..33840;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000024.1 Genbank pseudogene 204 379 . - . ID=gene-SNF32_10695;Name=SNF32_10695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10695;pseudo=true JAXGFV010000024.1 Protein Homology CDS 204 379 . - 0 ID=cds-SNF32_10695;Parent=gene-SNF32_10695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735150.1;locus_tag=SNF32_10695;product=DUF3042 family protein;pseudo=true;transl_table=11 JAXGFV010000024.1 Genbank pseudogene 614 1601 . + . ID=gene-SNF32_10700;Name=galE;gbkey=Gene;gene=galE;gene_biotype=pseudogene;locus_tag=SNF32_10700;pseudo=true JAXGFV010000024.1 Protein Homology CDS 614 1601 . + 0 ID=cds-SNF32_10700;Parent=gene-SNF32_10700;Note=frameshifted;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002288452.1;locus_tag=SNF32_10700;product=UDP-glucose 4-epimerase GalE;pseudo=true;transl_table=11 JAXGFV010000024.1 Genbank pseudogene 1612 3094 . + . ID=gene-SNF32_10705;Name=galT;gbkey=Gene;gene=galT;gene_biotype=pseudogene;locus_tag=SNF32_10705;pseudo=true JAXGFV010000024.1 Protein Homology CDS 1612 3094 . + 0 ID=cds-SNF32_10705;Parent=gene-SNF32_10705;Note=frameshifted;Ontology_term=GO:0019388,GO:0017103;gbkey=CDS;gene=galT;go_function=UTP:galactose-1-phosphate uridylyltransferase activity|0017103||IEA;go_process=galactose catabolic process|0019388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002342154.1;locus_tag=SNF32_10705;product=UDP-glucose--hexose-1-phosphate uridylyltransferase;pseudo=true;transl_table=11 JAXGFV010000024.1 Genbank pseudogene 3124 4114 . + . ID=gene-SNF32_10710;Name=SNF32_10710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10710;pseudo=true JAXGFV010000024.1 Protein Homology CDS 3124 4114 . + 0 ID=cds-SNF32_10710;Parent=gene-SNF32_10710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735153.1;locus_tag=SNF32_10710;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000024.1 Genbank gene 4248 4970 . + . ID=gene-SNF32_10715;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=SNF32_10715 JAXGFV010000024.1 Protein Homology CDS 4248 4970 . + 0 ID=cds-MDY4307595.1;Parent=gene-SNF32_10715;Dbxref=NCBI_GP:MDY4307595.1;Name=MDY4307595.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002326913.1;locus_tag=SNF32_10715;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=MDY4307595.1;transl_table=11 JAXGFV010000024.1 Genbank pseudogene 4954 5495 . + . ID=gene-SNF32_10720;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=pseudogene;locus_tag=SNF32_10720;pseudo=true JAXGFV010000024.1 Protein Homology CDS 4954 5495 . + 0 ID=cds-SNF32_10720;Parent=gene-SNF32_10720;Note=frameshifted;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=peptide-alanine-alpha-N-acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002348676.1;locus_tag=SNF32_10720;product=ribosomal protein S18-alanine N-acetyltransferase;pseudo=true;transl_table=11 JAXGFV010000024.1 Genbank pseudogene 5502 5970 . + . ID=gene-SNF32_10725;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=pseudogene;locus_tag=SNF32_10725;pseudo=true JAXGFV010000024.1 Protein Homology CDS 5502 5970 . + 0 ID=cds-SNF32_10725;Parent=gene-SNF32_10725;Note=frameshifted;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=peptide-alanine-alpha-N-acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735156.1;locus_tag=SNF32_10725;product=ribosomal protein S18-alanine N-acetyltransferase;pseudo=true;transl_table=11 JAXGFV010000024.1 Genbank gene 5967 7010 . + . ID=gene-SNF32_10730;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=SNF32_10730 JAXGFV010000024.1 Protein Homology CDS 5967 7010 . + 0 ID=cds-MDY4307596.1;Parent=gene-SNF32_10730;Dbxref=NCBI_GP:MDY4307596.1;Name=MDY4307596.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724246.1;locus_tag=SNF32_10730;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=MDY4307596.1;transl_table=11 JAXGFV010000024.1 Genbank gene 7302 7835 . + . ID=gene-SNF32_10735;Name=SNF32_10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10735 JAXGFV010000024.1 GeneMarkS-2+ CDS 7302 7835 . + 0 ID=cds-MDY4307597.1;Parent=gene-SNF32_10735;Dbxref=NCBI_GP:MDY4307597.1;Name=MDY4307597.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10735;product=hypothetical protein;protein_id=MDY4307597.1;transl_table=11 JAXGFV010000024.1 Genbank pseudogene 7958 8559 . + . ID=gene-SNF32_10740;Name=SNF32_10740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10740;pseudo=true JAXGFV010000024.1 Protein Homology CDS 7958 8559 . + 0 ID=cds-SNF32_10740;Parent=gene-SNF32_10740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010756812.1;locus_tag=SNF32_10740;product=class D sortase;pseudo=true;transl_table=11 JAXGFV010000024.1 Genbank gene 8646 9044 . + . ID=gene-SNF32_10745;Name=SNF32_10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10745 JAXGFV010000024.1 GeneMarkS-2+ CDS 8646 9044 . + 0 ID=cds-MDY4307598.1;Parent=gene-SNF32_10745;Dbxref=NCBI_GP:MDY4307598.1;Name=MDY4307598.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10745;product=hypothetical protein;protein_id=MDY4307598.1;transl_table=11 JAXGFV010000024.1 Genbank gene 9041 9181 . + . ID=gene-SNF32_10750;Name=SNF32_10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10750 JAXGFV010000024.1 GeneMarkS-2+ CDS 9041 9181 . + 0 ID=cds-MDY4307599.1;Parent=gene-SNF32_10750;Dbxref=NCBI_GP:MDY4307599.1;Name=MDY4307599.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10750;product=hypothetical protein;protein_id=MDY4307599.1;transl_table=11 JAXGFV010000024.1 Genbank gene 9440 10216 . + . ID=gene-SNF32_10755;Name=SNF32_10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10755 JAXGFV010000024.1 Protein Homology CDS 9440 10216 . + 0 ID=cds-MDY4307600.1;Parent=gene-SNF32_10755;Dbxref=NCBI_GP:MDY4307600.1;Name=MDY4307600.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724208.1;locus_tag=SNF32_10755;product=Wzz/FepE/Etk N-terminal domain-containing protein;protein_id=MDY4307600.1;transl_table=11 JAXGFV010000024.1 Genbank gene 10229 10906 . + . ID=gene-SNF32_10760;Name=SNF32_10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10760 JAXGFV010000024.1 Protein Homology CDS 10229 10906 . + 0 ID=cds-MDY4307601.1;Parent=gene-SNF32_10760;Dbxref=NCBI_GP:MDY4307601.1;Name=MDY4307601.1;Ontology_term=GO:0004713,GO:0004715,GO:0005524;gbkey=CDS;go_function=protein tyrosine kinase activity|0004713||IEA,non-membrane spanning protein tyrosine kinase activity|0004715||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724207.1;locus_tag=SNF32_10760;product=CpsD/CapB family tyrosine-protein kinase;protein_id=MDY4307601.1;transl_table=11 JAXGFV010000024.1 Genbank gene 10924 11664 . + . ID=gene-SNF32_10765;Name=SNF32_10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10765 JAXGFV010000024.1 Protein Homology CDS 10924 11664 . + 0 ID=cds-MDY4307602.1;Parent=gene-SNF32_10765;Dbxref=NCBI_GP:MDY4307602.1;Name=MDY4307602.1;Ontology_term=GO:0045227,GO:0004725,GO:0030145;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA,manganese ion binding|0030145||IEA;go_process=capsule polysaccharide biosynthetic process|0045227||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735163.1;locus_tag=SNF32_10765;product=CpsB/CapC family capsule biosynthesis tyrosine phosphatase;protein_id=MDY4307602.1;transl_table=11 JAXGFV010000024.1 Genbank pseudogene 11686 13497 . + . ID=gene-SNF32_10770;Name=SNF32_10770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10770;pseudo=true JAXGFV010000024.1 Protein Homology CDS 11686 13497 . + 0 ID=cds-SNF32_10770;Parent=gene-SNF32_10770;Note=frameshifted;Ontology_term=GO:0000271;gbkey=CDS;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008264441.1;locus_tag=SNF32_10770;product=nucleoside-diphosphate sugar epimerase/dehydratase;pseudo=true;transl_table=11 JAXGFV010000024.1 Genbank pseudogene 13514 14644 . + . ID=gene-SNF32_10775;Name=SNF32_10775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10775;pseudo=true JAXGFV010000024.1 Protein Homology CDS 13514 14644 . + 0 ID=cds-SNF32_10775;Parent=gene-SNF32_10775;Note=frameshifted;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737945.1;locus_tag=SNF32_10775;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11 JAXGFV010000024.1 Genbank pseudogene 14619 15241 . + . ID=gene-SNF32_10780;Name=SNF32_10780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10780;pseudo=true JAXGFV010000024.1 Protein Homology CDS 14619 15241 . + 0 ID=cds-SNF32_10780;Parent=gene-SNF32_10780;Note=frameshifted;Ontology_term=GO:0006486,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: protein motif:HMM:NF014453.3;locus_tag=SNF32_10780;product=sugar transferase;pseudo=true;transl_table=11 JAXGFV010000024.1 Genbank gene 15362 15673 . + . ID=gene-SNF32_10785;Name=SNF32_10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10785 JAXGFV010000024.1 Protein Homology CDS 15362 15673 . + 0 ID=cds-MDY4307603.1;Parent=gene-SNF32_10785;Dbxref=NCBI_GP:MDY4307603.1;Name=MDY4307603.1;Ontology_term=GO:0008080,GO:0016747;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF024812.3;locus_tag=SNF32_10785;product=GNAT family N-acetyltransferase;protein_id=MDY4307603.1;transl_table=11 JAXGFV010000024.1 Genbank gene 15750 16688 . + . ID=gene-SNF32_10790;Name=SNF32_10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10790 JAXGFV010000024.1 Protein Homology CDS 15750 16688 . + 0 ID=cds-MDY4307604.1;Parent=gene-SNF32_10790;Dbxref=NCBI_GP:MDY4307604.1;Name=MDY4307604.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF009406.0;locus_tag=SNF32_10790;product=ATP-grasp domain-containing protein;protein_id=MDY4307604.1;transl_table=11 JAXGFV010000024.1 Genbank gene 16890 17117 . + . ID=gene-SNF32_10795;Name=SNF32_10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10795 JAXGFV010000024.1 GeneMarkS-2+ CDS 16890 17117 . + 0 ID=cds-MDY4307605.1;Parent=gene-SNF32_10795;Dbxref=NCBI_GP:MDY4307605.1;Name=MDY4307605.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10795;product=hypothetical protein;protein_id=MDY4307605.1;transl_table=11 JAXGFV010000024.1 Genbank gene 17492 17920 . + . ID=gene-SNF32_10800;Name=SNF32_10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10800 JAXGFV010000024.1 Protein Homology CDS 17492 17920 . + 0 ID=cds-MDY4307606.1;Parent=gene-SNF32_10800;Dbxref=NCBI_GP:MDY4307606.1;Name=MDY4307606.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.3;locus_tag=SNF32_10800;product=hypothetical protein;protein_id=MDY4307606.1;transl_table=11 JAXGFV010000024.1 Genbank pseudogene 17936 18932 . + . ID=gene-SNF32_10805;Name=SNF32_10805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10805;pseudo=true JAXGFV010000024.1 Protein Homology CDS 17936 18932 . + 0 ID=cds-SNF32_10805;Parent=gene-SNF32_10805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002334151.1;locus_tag=SNF32_10805;product=polysaccharide biosynthesis protein;pseudo=true;transl_table=11 JAXGFV010000024.1 Genbank pseudogene 18949 20051 . + . ID=gene-SNF32_10810;Name=SNF32_10810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10810;pseudo=true JAXGFV010000024.1 Protein Homology CDS 18949 20051 . + 0 ID=cds-SNF32_10810;Parent=gene-SNF32_10810;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016623383.1;locus_tag=SNF32_10810;product=capsular polysaccharide biosynthesis protein CapF;pseudo=true;transl_table=11 JAXGFV010000024.1 Genbank pseudogene 20051 21175 . + . ID=gene-SNF32_10815;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=pseudogene;locus_tag=SNF32_10815;pseudo=true JAXGFV010000024.1 Protein Homology CDS 20051 21175 . + 0 ID=cds-SNF32_10815;Parent=gene-SNF32_10815;Note=frameshifted;Ontology_term=GO:0009103,GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015695289.1;locus_tag=SNF32_10815;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);pseudo=true;transl_table=11 JAXGFV010000024.1 Genbank gene 21492 21812 . + . ID=gene-SNF32_10820;Name=SNF32_10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10820 JAXGFV010000024.1 Protein Homology CDS 21492 21812 . + 0 ID=cds-MDY4307607.1;Parent=gene-SNF32_10820;Dbxref=NCBI_GP:MDY4307607.1;Name=MDY4307607.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025953.3;locus_tag=SNF32_10820;product=DapH/DapD/GlmU-related protein;protein_id=MDY4307607.1;transl_table=11 JAXGFV010000024.1 Genbank gene 22225 22449 . + . ID=gene-SNF32_10825;Name=SNF32_10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10825 JAXGFV010000024.1 GeneMarkS-2+ CDS 22225 22449 . + 0 ID=cds-MDY4307608.1;Parent=gene-SNF32_10825;Dbxref=NCBI_GP:MDY4307608.1;Name=MDY4307608.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10825;product=hypothetical protein;protein_id=MDY4307608.1;transl_table=11 JAXGFV010000024.1 Genbank gene 22525 22788 . + . ID=gene-SNF32_10830;Name=SNF32_10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10830 JAXGFV010000024.1 GeneMarkS-2+ CDS 22525 22788 . + 0 ID=cds-MDY4307609.1;Parent=gene-SNF32_10830;Dbxref=NCBI_GP:MDY4307609.1;Name=MDY4307609.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10830;product=hypothetical protein;protein_id=MDY4307609.1;transl_table=11 JAXGFV010000024.1 Genbank pseudogene 24122 25286 . + . ID=gene-SNF32_10835;Name=SNF32_10835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10835;pseudo=true JAXGFV010000024.1 Protein Homology CDS 24122 25286 . + 0 ID=cds-SNF32_10835;Parent=gene-SNF32_10835;Note=frameshifted;Ontology_term=GO:0000271,GO:0003979,GO:0016616,GO:0051287;gbkey=CDS;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014862286.1;locus_tag=SNF32_10835;product=nucleotide sugar dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000024.1 Genbank gene 25338 25640 . + . ID=gene-SNF32_10840;Name=SNF32_10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10840 JAXGFV010000024.1 Protein Homology CDS 25338 25640 . + 0 ID=cds-MDY4307610.1;Parent=gene-SNF32_10840;Dbxref=NCBI_GP:MDY4307610.1;Name=MDY4307610.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF014051.3;locus_tag=SNF32_10840;product=oligosaccharide flippase family protein;protein_id=MDY4307610.1;transl_table=11 JAXGFV010000024.1 Genbank gene 25834 26121 . + . ID=gene-SNF32_10845;Name=SNF32_10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10845 JAXGFV010000024.1 Protein Homology CDS 25834 26121 . + 0 ID=cds-MDY4307611.1;Parent=gene-SNF32_10845;Dbxref=NCBI_GP:MDY4307611.1;Name=MDY4307611.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF024832.3;locus_tag=SNF32_10845;product=oligosaccharide flippase family protein;protein_id=MDY4307611.1;transl_table=11 JAXGFV010000024.1 Genbank gene 26465 26701 . + . ID=gene-SNF32_10850;Name=SNF32_10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10850 JAXGFV010000024.1 Protein Homology CDS 26465 26701 . + 0 ID=cds-MDY4307612.1;Parent=gene-SNF32_10850;Dbxref=NCBI_GP:MDY4307612.1;Name=MDY4307612.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026018.3;locus_tag=SNF32_10850;product=hypothetical protein;protein_id=MDY4307612.1;transl_table=11 JAXGFV010000024.1 Genbank pseudogene 26809 27509 . - . ID=gene-SNF32_10855;Name=SNF32_10855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10855;pseudo=true JAXGFV010000024.1 Protein Homology CDS 26809 27509 . - 0 ID=cds-SNF32_10855;Parent=gene-SNF32_10855;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700,GO:0030552;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,cAMP binding|0030552||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002400355.1;locus_tag=SNF32_10855;product=Crp/Fnr family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000024.1 Genbank gene 27968 29197 . + . ID=gene-SNF32_10860;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=SNF32_10860 JAXGFV010000024.1 Protein Homology CDS 27968 29197 . + 0 ID=cds-MDY4307613.1;Parent=gene-SNF32_10860;Dbxref=NCBI_GP:MDY4307613.1;Name=MDY4307613.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002338827.1;locus_tag=SNF32_10860;product=arginine deiminase;protein_id=MDY4307613.1;transl_table=11 JAXGFV010000024.1 Genbank pseudogene 29303 30317 . + . ID=gene-SNF32_10865;Name=argF;gbkey=Gene;gene=argF;gene_biotype=pseudogene;locus_tag=SNF32_10865;pseudo=true JAXGFV010000024.1 Protein Homology CDS 29303 30317 . + 0 ID=cds-SNF32_10865;Parent=gene-SNF32_10865;Note=frameshifted%3B internal stop;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735175.1;locus_tag=SNF32_10865;product=ornithine carbamoyltransferase;pseudo=true;transl_table=11 JAXGFV010000024.1 Genbank gene 30431 31384 . + . ID=gene-SNF32_10870;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=SNF32_10870 JAXGFV010000024.1 Protein Homology CDS 30431 31384 . + 0 ID=cds-MDY4307614.1;Parent=gene-SNF32_10870;Dbxref=NCBI_GP:MDY4307614.1;Name=MDY4307614.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735176.1;locus_tag=SNF32_10870;product=carbamate kinase;protein_id=MDY4307614.1;transl_table=11 JAXGFV010000024.1 Genbank pseudogene 31841 33528 . + . ID=gene-SNF32_10875;Name=argS;gbkey=Gene;gene=argS;gene_biotype=pseudogene;locus_tag=SNF32_10875;pseudo=true JAXGFV010000024.1 Protein Homology CDS 31841 33528 . + 0 ID=cds-SNF32_10875;Parent=gene-SNF32_10875;Note=frameshifted;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722840.1;locus_tag=SNF32_10875;product=arginine--tRNA ligase;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000025.1 1 33677 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000025.1 Genbank region 1 33677 . + . ID=JAXGFV010000025.1:1..33677;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000025.1 Genbank pseudogene 34 1373 . - . ID=gene-SNF32_10880;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=pseudogene;locus_tag=SNF32_10880;pseudo=true JAXGFV010000025.1 Protein Homology CDS 34 1373 . - 0 ID=cds-SNF32_10880;Parent=gene-SNF32_10880;Note=frameshifted;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002332748.1;locus_tag=SNF32_10880;product=type I glutamate--ammonia ligase;pseudo=true;transl_table=11 JAXGFV010000025.1 Genbank gene 1403 1798 . - . ID=gene-SNF32_10885;Name=SNF32_10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10885 JAXGFV010000025.1 Protein Homology CDS 1403 1798 . - 0 ID=cds-MDY4307615.1;Parent=gene-SNF32_10885;Dbxref=NCBI_GP:MDY4307615.1;Name=MDY4307615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287002.1;locus_tag=SNF32_10885;product=MerR family transcriptional regulator;protein_id=MDY4307615.1;transl_table=11 JAXGFV010000025.1 Genbank gene 1922 3208 . - . ID=gene-SNF32_10890;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=SNF32_10890 JAXGFV010000025.1 Protein Homology CDS 1922 3208 . - 0 ID=cds-MDY4307616.1;Parent=gene-SNF32_10890;Dbxref=NCBI_GP:MDY4307616.1;Name=MDY4307616.1;Ontology_term=GO:0008150,GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736066.1;locus_tag=SNF32_10890;product=GTPase HflX;protein_id=MDY4307616.1;transl_table=11 JAXGFV010000025.1 Genbank pseudogene 3205 4125 . - . ID=gene-SNF32_10895;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=pseudogene;locus_tag=SNF32_10895;pseudo=true JAXGFV010000025.1 Protein Homology CDS 3205 4125 . - 0 ID=cds-SNF32_10895;Parent=gene-SNF32_10895;Note=frameshifted;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736067.1;locus_tag=SNF32_10895;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;pseudo=true;transl_table=11 JAXGFV010000025.1 Genbank pseudogene 4132 4863 . - . ID=gene-SNF32_10900;Name=SNF32_10900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10900;pseudo=true JAXGFV010000025.1 Protein Homology CDS 4132 4863 . - 0 ID=cds-SNF32_10900;Parent=gene-SNF32_10900;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016628886.1;locus_tag=SNF32_10900;product=glycerophosphodiester phosphodiesterase;pseudo=true;transl_table=11 JAXGFV010000025.1 Genbank pseudogene 4998 5523 . - . ID=gene-SNF32_10905;Name=SNF32_10905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10905;pseudo=true JAXGFV010000025.1 Protein Homology CDS 4998 5523 . - 0 ID=cds-SNF32_10905;Parent=gene-SNF32_10905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010752644.1;locus_tag=SNF32_10905;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000025.1 Genbank gene 5702 6295 . + . ID=gene-SNF32_10910;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=SNF32_10910 JAXGFV010000025.1 Protein Homology CDS 5702 6295 . + 0 ID=cds-MDY4307617.1;Parent=gene-SNF32_10910;Dbxref=NCBI_GP:MDY4307617.1;Name=MDY4307617.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002289402.1;locus_tag=SNF32_10910;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=MDY4307617.1;transl_table=11 JAXGFV010000025.1 Genbank pseudogene 6378 6865 . - . ID=gene-SNF32_10915;Name=SNF32_10915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10915;pseudo=true JAXGFV010000025.1 Protein Homology CDS 6378 6865 . - 0 ID=cds-SNF32_10915;Parent=gene-SNF32_10915;Note=frameshifted;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736071.1;locus_tag=SNF32_10915;product=gamma carbonic anhydrase family protein;pseudo=true;transl_table=11 JAXGFV010000025.1 Genbank pseudogene 6938 8655 . - . ID=gene-SNF32_10920;Name=efrB;gbkey=Gene;gene=efrB;gene_biotype=pseudogene;locus_tag=SNF32_10920;pseudo=true JAXGFV010000025.1 Protein Homology CDS 6938 8655 . - 0 ID=cds-SNF32_10920;Parent=gene-SNF32_10920;Note=frameshifted;gbkey=CDS;gene=efrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005225159.1;locus_tag=SNF32_10920;product=multidrug efflux ABC transporter subunit EfrB;pseudo=true;transl_table=11 JAXGFV010000025.1 Genbank pseudogene 8693 10418 . - . ID=gene-SNF32_10925;Name=SNF32_10925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10925;pseudo=true JAXGFV010000025.1 Protein Homology CDS 8693 10418 . - 0 ID=cds-SNF32_10925;Parent=gene-SNF32_10925;Note=frameshifted;Ontology_term=GO:0005524,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002327196.1;locus_tag=SNF32_10925;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000025.1 Genbank gene 10800 11012 . + . ID=gene-SNF32_10930;Name=SNF32_10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10930 JAXGFV010000025.1 Protein Homology CDS 10800 11012 . + 0 ID=cds-MDY4307618.1;Parent=gene-SNF32_10930;Dbxref=NCBI_GP:MDY4307618.1;Name=MDY4307618.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736074.1;locus_tag=SNF32_10930;product=DNA-directed RNA polymerase subunit epsilon;protein_id=MDY4307618.1;transl_table=11 JAXGFV010000025.1 Genbank pseudogene 11014 12689 . + . ID=gene-SNF32_10935;Name=SNF32_10935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10935;pseudo=true JAXGFV010000025.1 Protein Homology CDS 11014 12689 . + 0 ID=cds-SNF32_10935;Parent=gene-SNF32_10935;Note=frameshifted;Ontology_term=GO:0003723,GO:0004540,GO:0008270;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736075.1;locus_tag=SNF32_10935;product=ribonuclease J;pseudo=true;transl_table=11 JAXGFV010000025.1 Genbank gene 13018 13218 . - . ID=gene-SNF32_10940;Name=SNF32_10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10940 JAXGFV010000025.1 Protein Homology CDS 13018 13218 . - 0 ID=cds-MDY4307619.1;Parent=gene-SNF32_10940;Dbxref=NCBI_GP:MDY4307619.1;Name=MDY4307619.1;Ontology_term=GO:0001072,GO:0003676,GO:0003723,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,nucleic acid binding|0003676||IEA,RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002294067.1;locus_tag=SNF32_10940;product=cold-shock protein;protein_id=MDY4307619.1;transl_table=11 JAXGFV010000025.1 Genbank gene 13367 14047 . - . ID=gene-SNF32_10945;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=SNF32_10945 JAXGFV010000025.1 Protein Homology CDS 13367 14047 . - 0 ID=cds-MDY4307620.1;Parent=gene-SNF32_10945;Dbxref=NCBI_GP:MDY4307620.1;Name=MDY4307620.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014834486.1;locus_tag=SNF32_10945;product=DNA repair protein RadC;protein_id=MDY4307620.1;transl_table=11 JAXGFV010000025.1 Genbank pseudogene 14121 14772 . - . ID=gene-SNF32_10950;Name=SNF32_10950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10950;pseudo=true JAXGFV010000025.1 Protein Homology CDS 14121 14772 . - 0 ID=cds-SNF32_10950;Parent=gene-SNF32_10950;Note=frameshifted;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002339589.1;locus_tag=SNF32_10950;product=HAD family phosphatase;pseudo=true;transl_table=11 JAXGFV010000025.1 Genbank pseudogene 14764 16073 . - . ID=gene-SNF32_10955;Name=SNF32_10955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10955;pseudo=true JAXGFV010000025.1 Protein Homology CDS 14764 16073 . - 0 ID=cds-SNF32_10955;Parent=gene-SNF32_10955;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006730,GO:0004326,GO:0005524,GO:0008841,GO:0046872;gbkey=CDS;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,dihydrofolate synthase activity|0008841||IEA,metal ion binding|0046872||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002339588.1;locus_tag=SNF32_10955;product=folylpolyglutamate synthase/dihydrofolate synthase family protein;pseudo=true;transl_table=11 JAXGFV010000025.1 Genbank gene 16194 17066 . - . ID=gene-SNF32_10960;Name=SNF32_10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10960 JAXGFV010000025.1 Protein Homology CDS 16194 17066 . - 0 ID=cds-MDY4307621.1;Parent=gene-SNF32_10960;Dbxref=NCBI_GP:MDY4307621.1;Name=MDY4307621.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: protein motif:HMM:NF019869.3;locus_tag=SNF32_10960;product=class I tRNA ligase family protein;protein_id=MDY4307621.1;transl_table=11 JAXGFV010000025.1 Genbank gene 17110 18618 . - . ID=gene-SNF32_10965;Name=SNF32_10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10965 JAXGFV010000025.1 Protein Homology CDS 17110 18618 . - 0 ID=cds-MDY4307622.1;Parent=gene-SNF32_10965;Dbxref=NCBI_GP:MDY4307622.1;Name=MDY4307622.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: protein motif:HMM:TIGR00422.1;locus_tag=SNF32_10965;product=valine--tRNA ligase;protein_id=MDY4307622.1;transl_table=11 JAXGFV010000025.1 Genbank gene 18686 18835 . - . ID=gene-SNF32_10970;Name=SNF32_10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10970 JAXGFV010000025.1 GeneMarkS-2+ CDS 18686 18835 . - 0 ID=cds-MDY4307623.1;Parent=gene-SNF32_10970;Dbxref=NCBI_GP:MDY4307623.1;Name=MDY4307623.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_10970;product=hypothetical protein;protein_id=MDY4307623.1;transl_table=11 JAXGFV010000025.1 cmsearch binding_site 18881 19093 . - . ID=id-JAXGFV010000025.1:18881..19093;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.4 JAXGFV010000025.1 Genbank gene 19197 19850 . - . ID=gene-SNF32_10975;Name=SNF32_10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_10975 JAXGFV010000025.1 Protein Homology CDS 19197 19850 . - 0 ID=cds-MDY4307624.1;Parent=gene-SNF32_10975;Dbxref=NCBI_GP:MDY4307624.1;Name=MDY4307624.1;Ontology_term=GO:0045892,GO:0051775;gbkey=CDS;go_process=negative regulation of DNA-templated transcription|0045892||IEA,response to redox state|0051775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736081.1;locus_tag=SNF32_10975;product=redox-sensing transcriptional repressor Rex;protein_id=MDY4307624.1;transl_table=11 JAXGFV010000025.1 Genbank pseudogene 20110 21319 . - . ID=gene-SNF32_10980;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=pseudogene;locus_tag=SNF32_10980;pseudo=true JAXGFV010000025.1 Protein Homology CDS 20110 21319 . - 0 ID=cds-SNF32_10980;Parent=gene-SNF32_10980;Note=frameshifted;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002391639.1;locus_tag=SNF32_10980;product=tRNA uracil 4-sulfurtransferase ThiI;pseudo=true;transl_table=11 JAXGFV010000025.1 Genbank pseudogene 21339 22477 . - . ID=gene-SNF32_10985;Name=SNF32_10985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10985;pseudo=true JAXGFV010000025.1 Protein Homology CDS 21339 22477 . - 0 ID=cds-SNF32_10985;Parent=gene-SNF32_10985;Note=frameshifted;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002294077.1;locus_tag=SNF32_10985;product=cysteine desulfurase family protein;pseudo=true;transl_table=11 JAXGFV010000025.1 Genbank pseudogene 22673 24040 . - . ID=gene-SNF32_10990;Name=SNF32_10990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10990;pseudo=true JAXGFV010000025.1 Protein Homology CDS 22673 24040 . - 0 ID=cds-SNF32_10990;Parent=gene-SNF32_10990;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017926.3;locus_tag=SNF32_10990;product=septation ring formation regulator EzrA;pseudo=true;transl_table=11 JAXGFV010000025.1 Genbank pseudogene 24589 25079 . - . ID=gene-SNF32_10995;Name=SNF32_10995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_10995;pseudo=true JAXGFV010000025.1 Protein Homology CDS 24589 25079 . - 0 ID=cds-SNF32_10995;Parent=gene-SNF32_10995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010738071.1;locus_tag=SNF32_10995;product=HAD family hydrolase;pseudo=true;transl_table=11 JAXGFV010000025.1 Genbank gene 25199 25666 . - . ID=gene-SNF32_11000;Name=SNF32_11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11000 JAXGFV010000025.1 Protein Homology CDS 25199 25666 . - 0 ID=cds-MDY4307625.1;Parent=gene-SNF32_11000;Dbxref=NCBI_GP:MDY4307625.1;Name=MDY4307625.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019887.3;locus_tag=SNF32_11000;product=HAD hydrolase family protein;protein_id=MDY4307625.1;transl_table=11 JAXGFV010000025.1 Genbank gene 25681 25851 . - . ID=gene-SNF32_11005;Name=SNF32_11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11005 JAXGFV010000025.1 Protein Homology CDS 25681 25851 . - 0 ID=cds-MDY4307626.1;Parent=gene-SNF32_11005;Dbxref=NCBI_GP:MDY4307626.1;Name=MDY4307626.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019887.3;locus_tag=SNF32_11005;product=HAD hydrolase family protein;protein_id=MDY4307626.1;transl_table=11 JAXGFV010000025.1 Genbank gene 25863 26012 . - . ID=gene-SNF32_11010;Name=SNF32_11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11010 JAXGFV010000025.1 Protein Homology CDS 25863 26012 . - 0 ID=cds-MDY4307627.1;Parent=gene-SNF32_11010;Dbxref=NCBI_GP:MDY4307627.1;Name=MDY4307627.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019887.3;locus_tag=SNF32_11010;product=HAD hydrolase family protein;protein_id=MDY4307627.1;transl_table=11 JAXGFV010000025.1 Genbank pseudogene 26123 26953 . - . ID=gene-SNF32_11015;Name=SNF32_11015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11015;pseudo=true JAXGFV010000025.1 Protein Homology CDS 26123 26953 . - 0 ID=cds-SNF32_11015;Parent=gene-SNF32_11015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002372832.1;locus_tag=SNF32_11015;product=DUF72 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000025.1 Genbank pseudogene 27138 28062 . + . ID=gene-SNF32_11020;Name=SNF32_11020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11020;pseudo=true JAXGFV010000025.1 Protein Homology CDS 27138 28062 . + 0 ID=cds-SNF32_11020;Parent=gene-SNF32_11020;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010752668.1;locus_tag=SNF32_11020;product=asparaginase;pseudo=true;transl_table=11 JAXGFV010000025.1 Genbank pseudogene 28244 28999 . - . ID=gene-SNF32_11025;Name=SNF32_11025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11025;pseudo=true JAXGFV010000025.1 Protein Homology CDS 28244 28999 . - 0 ID=cds-SNF32_11025;Parent=gene-SNF32_11025;Note=frameshifted;Ontology_term=GO:0006633,GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003127324.1;locus_tag=SNF32_11025;product=thioesterase;pseudo=true;transl_table=11 JAXGFV010000025.1 Genbank pseudogene 29025 29856 . - . ID=gene-SNF32_11030;Name=SNF32_11030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11030;pseudo=true JAXGFV010000025.1 Protein Homology CDS 29025 29856 . - 0 ID=cds-SNF32_11030;Parent=gene-SNF32_11030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736090.1;locus_tag=SNF32_11030;product=fructosamine kinase family protein;pseudo=true;transl_table=11 JAXGFV010000025.1 Genbank pseudogene 30037 31362 . - . ID=gene-SNF32_11035;Name=SNF32_11035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11035;pseudo=true JAXGFV010000025.1 Protein Homology CDS 30037 31362 . - 0 ID=cds-SNF32_11035;Parent=gene-SNF32_11035;Note=frameshifted;Ontology_term=GO:0006508,GO:0008234;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287964.1;locus_tag=SNF32_11035;product=C1 family peptidase;pseudo=true;transl_table=11 JAXGFV010000025.1 Genbank gene 31526 31599 . - . ID=gene-SNF32_11040;Name=SNF32_11040;gbkey=Gene;gene_biotype=tRNA;locus_tag=SNF32_11040 JAXGFV010000025.1 tRNAscan-SE tRNA 31526 31599 . - . ID=rna-SNF32_11040;Parent=gene-SNF32_11040;anticodon=(pos:complement(31563..31565));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_11040;product=tRNA-Asn JAXGFV010000025.1 tRNAscan-SE exon 31526 31599 . - . ID=exon-SNF32_11040-1;Parent=rna-SNF32_11040;anticodon=(pos:complement(31563..31565));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_11040;product=tRNA-Asn JAXGFV010000025.1 Genbank gene 31798 31870 . + . ID=gene-SNF32_11045;Name=SNF32_11045;gbkey=Gene;gene_biotype=tRNA;locus_tag=SNF32_11045 JAXGFV010000025.1 tRNAscan-SE tRNA 31798 31870 . + . ID=rna-SNF32_11045;Parent=gene-SNF32_11045;anticodon=(pos:31831..31833);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_11045;product=tRNA-Thr JAXGFV010000025.1 tRNAscan-SE exon 31798 31870 . + . ID=exon-SNF32_11045-1;Parent=rna-SNF32_11045;anticodon=(pos:31831..31833);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_11045;product=tRNA-Thr JAXGFV010000025.1 Genbank gene 32551 32970 . - . ID=gene-SNF32_11050;Name=SNF32_11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11050 JAXGFV010000025.1 GeneMarkS-2+ CDS 32551 32970 . - 0 ID=cds-MDY4307628.1;Parent=gene-SNF32_11050;Dbxref=NCBI_GP:MDY4307628.1;Name=MDY4307628.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11050;product=hypothetical protein;protein_id=MDY4307628.1;transl_table=11 ##sequence-region JAXGFV010000026.1 1 33503 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000026.1 Genbank region 1 33503 . + . ID=JAXGFV010000026.1:1..33503;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000026.1 Genbank pseudogene 311 564 . - . ID=gene-SNF32_11055;Name=SNF32_11055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11055;pseudo=true JAXGFV010000026.1 Protein Homology CDS 311 564 . - 0 ID=cds-SNF32_11055;Parent=gene-SNF32_11055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722300.1;locus_tag=SNF32_11055;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000026.1 Genbank pseudogene 1123 1316 . + . ID=gene-SNF32_11060;Name=SNF32_11060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11060;pseudo=true JAXGFV010000026.1 Protein Homology CDS 1123 1316 . + 0 ID=cds-SNF32_11060;Parent=gene-SNF32_11060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002292375.1;locus_tag=SNF32_11060;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000026.1 Genbank gene 1440 1694 . + . ID=gene-SNF32_11065;Name=SNF32_11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11065 JAXGFV010000026.1 GeneMarkS-2+ CDS 1440 1694 . + 0 ID=cds-MDY4307629.1;Parent=gene-SNF32_11065;Dbxref=NCBI_GP:MDY4307629.1;Name=MDY4307629.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11065;product=hypothetical protein;protein_id=MDY4307629.1;transl_table=11 JAXGFV010000026.1 Genbank pseudogene 2380 3076 . + . ID=gene-SNF32_11070;Name=SNF32_11070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11070;pseudo=true JAXGFV010000026.1 Protein Homology CDS 2380 3076 . + 0 ID=cds-SNF32_11070;Parent=gene-SNF32_11070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734290.1;locus_tag=SNF32_11070;product=VTT domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000026.1 Genbank pseudogene 3157 4396 . + . ID=gene-SNF32_11075;Name=SNF32_11075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11075;pseudo=true JAXGFV010000026.1 Protein Homology CDS 3157 4396 . + 0 ID=cds-SNF32_11075;Parent=gene-SNF32_11075;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629570.1;locus_tag=SNF32_11075;product=MFS transporter;pseudo=true;transl_table=11 JAXGFV010000026.1 Genbank pseudogene 4585 5283 . + . ID=gene-SNF32_11080;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=pseudogene;locus_tag=SNF32_11080;pseudo=true JAXGFV010000026.1 Protein Homology CDS 4585 5283 . + 0 ID=cds-SNF32_11080;Parent=gene-SNF32_11080;Note=frameshifted;Ontology_term=GO:0006046,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine catabolic process|0006046||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016853203.1;locus_tag=SNF32_11080;product=glucosamine-6-phosphate deaminase;pseudo=true;transl_table=11 JAXGFV010000026.1 Genbank pseudogene 5422 6131 . + . ID=gene-SNF32_11085;Name=SNF32_11085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11085;pseudo=true JAXGFV010000026.1 Protein Homology CDS 5422 6131 . + 0 ID=cds-SNF32_11085;Parent=gene-SNF32_11085;Note=frameshifted;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734293.1;locus_tag=SNF32_11085;product=MgtC/SapB family protein;pseudo=true;transl_table=11 JAXGFV010000026.1 Genbank pseudogene 6238 7373 . + . ID=gene-SNF32_11090;Name=SNF32_11090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11090;pseudo=true JAXGFV010000026.1 Protein Homology CDS 6238 7373 . + 0 ID=cds-SNF32_11090;Parent=gene-SNF32_11090;Note=frameshifted;Ontology_term=GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734294.1;locus_tag=SNF32_11090;product=AI-2E family transporter;pseudo=true;transl_table=11 JAXGFV010000026.1 Genbank pseudogene 7437 9222 . - . ID=gene-SNF32_11095;Name=SNF32_11095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11095;pseudo=true JAXGFV010000026.1 Protein Homology CDS 7437 9222 . - 0 ID=cds-SNF32_11095;Parent=gene-SNF32_11095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722289.1;locus_tag=SNF32_11095;product=beta-galactosidase family protein;pseudo=true;transl_table=11 JAXGFV010000026.1 Genbank pseudogene 9204 10396 . - . ID=gene-SNF32_11100;Name=SNF32_11100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11100;pseudo=true JAXGFV010000026.1 Protein Homology CDS 9204 10396 . - 0 ID=cds-SNF32_11100;Parent=gene-SNF32_11100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016611520.1;locus_tag=SNF32_11100;product=glycoside hydrolase family 88 protein;pseudo=true;transl_table=11 JAXGFV010000026.1 Genbank pseudogene 10662 11368 . - . ID=gene-SNF32_11105;Name=SNF32_11105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11105;pseudo=true JAXGFV010000026.1 Protein Homology CDS 10662 11368 . - 0 ID=cds-SNF32_11105;Parent=gene-SNF32_11105;Note=frameshifted;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002416653.1;locus_tag=SNF32_11105;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000026.1 Genbank pseudogene 11584 12504 . + . ID=gene-SNF32_11110;Name=SNF32_11110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11110;pseudo=true JAXGFV010000026.1 Protein Homology CDS 11584 12504 . + 0 ID=cds-SNF32_11110;Parent=gene-SNF32_11110;Note=frameshifted;Ontology_term=GO:0009401,GO:0008982,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722286.1;locus_tag=SNF32_11110;product=PTS sugar transporter subunit IIB;pseudo=true;transl_table=11 JAXGFV010000026.1 Genbank pseudogene 12537 13318 . + . ID=gene-SNF32_11115;Name=SNF32_11115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11115;pseudo=true JAXGFV010000026.1 Protein Homology CDS 12537 13318 . + 0 ID=cds-SNF32_11115;Parent=gene-SNF32_11115;Note=frameshifted;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: protein motif:HMM:NF015566.3;locus_tag=SNF32_11115;product=PTS sugar transporter subunit IIC;pseudo=true;transl_table=11 JAXGFV010000026.1 Genbank pseudogene 13305 14108 . + . ID=gene-SNF32_11120;Name=SNF32_11120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11120;pseudo=true JAXGFV010000026.1 Protein Homology CDS 13305 14108 . + 0 ID=cds-SNF32_11120;Parent=gene-SNF32_11120;Note=frameshifted;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002335462.1;locus_tag=SNF32_11120;product=PTS system mannose/fructose/sorbose family transporter subunit IID;pseudo=true;transl_table=11 JAXGFV010000026.1 Genbank pseudogene 14245 17256 . + . ID=gene-SNF32_11125;Name=SNF32_11125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11125;pseudo=true JAXGFV010000026.1 Protein Homology CDS 14245 17256 . + 0 ID=cds-SNF32_11125;Parent=gene-SNF32_11125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722284.1;locus_tag=SNF32_11125;product=polysaccharide lyase 8 family protein;pseudo=true;transl_table=11 JAXGFV010000026.1 Genbank gene 18229 18717 . - . ID=gene-SNF32_11130;Name=SNF32_11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11130 JAXGFV010000026.1 GeneMarkS-2+ CDS 18229 18717 . - 0 ID=cds-MDY4307630.1;Parent=gene-SNF32_11130;Dbxref=NCBI_GP:MDY4307630.1;Name=MDY4307630.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11130;product=hypothetical protein;protein_id=MDY4307630.1;transl_table=11 JAXGFV010000026.1 Genbank gene 18943 19104 . - . ID=gene-SNF32_11135;Name=SNF32_11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11135 JAXGFV010000026.1 GeneMarkS-2+ CDS 18943 19104 . - 0 ID=cds-MDY4307631.1;Parent=gene-SNF32_11135;Dbxref=NCBI_GP:MDY4307631.1;Name=MDY4307631.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11135;product=hypothetical protein;protein_id=MDY4307631.1;transl_table=11 JAXGFV010000026.1 Genbank gene 20074 20268 . + . ID=gene-SNF32_11140;Name=SNF32_11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11140 JAXGFV010000026.1 GeneMarkS-2+ CDS 20074 20268 . + 0 ID=cds-MDY4307632.1;Parent=gene-SNF32_11140;Dbxref=NCBI_GP:MDY4307632.1;Name=MDY4307632.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11140;product=hypothetical protein;protein_id=MDY4307632.1;transl_table=11 JAXGFV010000026.1 Genbank gene 20515 20757 . - . ID=gene-SNF32_11145;Name=SNF32_11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11145 JAXGFV010000026.1 GeneMarkS-2+ CDS 20515 20757 . - 0 ID=cds-MDY4307633.1;Parent=gene-SNF32_11145;Dbxref=NCBI_GP:MDY4307633.1;Name=MDY4307633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11145;product=hypothetical protein;protein_id=MDY4307633.1;transl_table=11 JAXGFV010000026.1 Genbank gene 20751 20990 . - . ID=gene-SNF32_11150;Name=SNF32_11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11150 JAXGFV010000026.1 Protein Homology CDS 20751 20990 . - 0 ID=cds-MDY4307634.1;Parent=gene-SNF32_11150;Dbxref=NCBI_GP:MDY4307634.1;Name=MDY4307634.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013695.3;locus_tag=SNF32_11150;product=hypothetical protein;protein_id=MDY4307634.1;transl_table=11 JAXGFV010000026.1 Genbank gene 21085 21411 . - . ID=gene-SNF32_11155;Name=SNF32_11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11155 JAXGFV010000026.1 Protein Homology CDS 21085 21411 . - 0 ID=cds-MDY4307635.1;Parent=gene-SNF32_11155;Dbxref=NCBI_GP:MDY4307635.1;Name=MDY4307635.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013695.3;locus_tag=SNF32_11155;product=cation transporter;protein_id=MDY4307635.1;transl_table=11 JAXGFV010000026.1 Genbank gene 21668 22129 . + . ID=gene-SNF32_11160;Name=SNF32_11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11160 JAXGFV010000026.1 Protein Homology CDS 21668 22129 . + 0 ID=cds-MDY4307636.1;Parent=gene-SNF32_11160;Dbxref=NCBI_GP:MDY4307636.1;Name=MDY4307636.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024852.3;locus_tag=SNF32_11160;product=NAD(P)H-binding protein;protein_id=MDY4307636.1;transl_table=11 JAXGFV010000026.1 Genbank pseudogene 22527 23541 . - . ID=gene-SNF32_11165;Name=SNF32_11165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11165;pseudo=true JAXGFV010000026.1 Protein Homology CDS 22527 23541 . - 0 ID=cds-SNF32_11165;Parent=gene-SNF32_11165;Note=frameshifted;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734311.1;locus_tag=SNF32_11165;product=NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11 JAXGFV010000026.1 Genbank pseudogene 23581 24607 . - . ID=gene-SNF32_11170;Name=SNF32_11170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11170;pseudo=true JAXGFV010000026.1 Protein Homology CDS 23581 24607 . - 0 ID=cds-SNF32_11170;Parent=gene-SNF32_11170;Note=frameshifted;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734312.1;locus_tag=SNF32_11170;product=AEC family transporter;pseudo=true;transl_table=11 JAXGFV010000026.1 Genbank gene 24890 25225 . + . ID=gene-SNF32_11175;Name=SNF32_11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11175 JAXGFV010000026.1 Protein Homology CDS 24890 25225 . + 0 ID=cds-MDY4307637.1;Parent=gene-SNF32_11175;Dbxref=NCBI_GP:MDY4307637.1;Name=MDY4307637.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: protein motif:HMM:NF012428.3;locus_tag=SNF32_11175;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=MDY4307637.1;transl_table=11 JAXGFV010000026.1 Genbank gene 25191 25349 . + . ID=gene-SNF32_11180;Name=SNF32_11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11180 JAXGFV010000026.1 GeneMarkS-2+ CDS 25191 25349 . + 0 ID=cds-MDY4307638.1;Parent=gene-SNF32_11180;Dbxref=NCBI_GP:MDY4307638.1;Name=MDY4307638.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11180;product=hypothetical protein;protein_id=MDY4307638.1;transl_table=11 JAXGFV010000026.1 Genbank gene 25325 26227 . + . ID=gene-SNF32_11185;Name=SNF32_11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11185 JAXGFV010000026.1 Protein Homology CDS 25325 26227 . + 0 ID=cds-MDY4307639.1;Parent=gene-SNF32_11185;Dbxref=NCBI_GP:MDY4307639.1;Name=MDY4307639.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: protein motif:HMM:NF012428.3;locus_tag=SNF32_11185;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=MDY4307639.1;transl_table=11 JAXGFV010000026.1 Genbank pseudogene 26246 27345 . + . ID=gene-SNF32_11190;Name=ald;gbkey=Gene;gene=ald;gene_biotype=pseudogene;locus_tag=SNF32_11190;pseudo=true JAXGFV010000026.1 Protein Homology CDS 26246 27345 . + 0 ID=cds-SNF32_11190;Parent=gene-SNF32_11190;Note=frameshifted;Ontology_term=GO:0006522,GO:0000286,GO:0005737;gbkey=CDS;gene=ald;go_component=cytoplasm|0005737||IEA;go_function=alanine dehydrogenase activity|0000286||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724174.1;locus_tag=SNF32_11190;product=alanine dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000026.1 Genbank pseudogene 27391 28415 . + . ID=gene-SNF32_11195;Name=SNF32_11195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11195;pseudo=true JAXGFV010000026.1 Protein Homology CDS 27391 28415 . + 0 ID=cds-SNF32_11195;Parent=gene-SNF32_11195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018030526.1;locus_tag=SNF32_11195;product=dihydrodipicolinate reductase;pseudo=true;transl_table=11 JAXGFV010000026.1 Genbank pseudogene 28480 29442 . - . ID=gene-SNF32_11200;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=pseudogene;locus_tag=SNF32_11200;pseudo=true JAXGFV010000026.1 Protein Homology CDS 28480 29442 . - 0 ID=cds-SNF32_11200;Parent=gene-SNF32_11200;Note=internal stop;Ontology_term=GO:0009265,GO:0004748,GO:0030145,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,manganese ion binding|0030145||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: protein motif:HMM:NF012490.3;locus_tag=SNF32_11200;product=class 1b ribonucleoside-diphosphate reductase subunit beta;pseudo=true;transl_table=11 JAXGFV010000026.1 Genbank pseudogene 29494 31650 . - . ID=gene-SNF32_11205;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=pseudogene;locus_tag=SNF32_11205;pseudo=true JAXGFV010000026.1 Protein Homology CDS 29494 31650 . - 0 ID=cds-SNF32_11205;Parent=gene-SNF32_11205;Note=frameshifted;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000053857.1;locus_tag=SNF32_11205;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;pseudo=true;transl_table=11 JAXGFV010000026.1 Genbank pseudogene 31831 32054 . - . ID=gene-SNF32_11210;Name=nrdH;gbkey=Gene;gene=nrdH;gene_biotype=pseudogene;locus_tag=SNF32_11210;pseudo=true JAXGFV010000026.1 Protein Homology CDS 31831 32054 . - 0 ID=cds-SNF32_11210;Parent=gene-SNF32_11210;Note=frameshifted;gbkey=CDS;gene=nrdH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016625075.1;locus_tag=SNF32_11210;product=glutaredoxin-like protein NrdH;pseudo=true;transl_table=11 JAXGFV010000026.1 Genbank gene 32699 32824 . + . ID=gene-SNF32_11215;Name=SNF32_11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11215 JAXGFV010000026.1 GeneMarkS-2+ CDS 32699 32824 . + 0 ID=cds-MDY4307640.1;Parent=gene-SNF32_11215;Dbxref=NCBI_GP:MDY4307640.1;Name=MDY4307640.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11215;product=hypothetical protein;protein_id=MDY4307640.1;transl_table=11 JAXGFV010000026.1 Genbank gene 32818 33503 . + . ID=gene-SNF32_11220;Name=SNF32_11220;end_range=33503,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11220;partial=true JAXGFV010000026.1 Protein Homology CDS 32818 33503 . + 0 ID=cds-MDY4307641.1;Parent=gene-SNF32_11220;Dbxref=NCBI_GP:MDY4307641.1;Name=MDY4307641.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;end_range=33503,.;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011375470.1;locus_tag=SNF32_11220;partial=true;product=GH25 family lysozyme;protein_id=MDY4307641.1;transl_table=11 ##sequence-region JAXGFV010000027.1 1 32171 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000027.1 Genbank region 1 32171 . + . ID=JAXGFV010000027.1:1..32171;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000027.1 Genbank pseudogene 74 919 . - . ID=gene-SNF32_11225;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=pseudogene;locus_tag=SNF32_11225;pseudo=true JAXGFV010000027.1 Protein Homology CDS 74 919 . - 0 ID=cds-SNF32_11225;Parent=gene-SNF32_11225;Note=frameshifted;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014834412.1;locus_tag=SNF32_11225;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;pseudo=true;transl_table=11 JAXGFV010000027.1 Genbank pseudogene 1032 3573 . - . ID=gene-SNF32_11230;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=pseudogene;locus_tag=SNF32_11230;pseudo=true JAXGFV010000027.1 Protein Homology CDS 1032 3573 . - 0 ID=cds-SNF32_11230;Parent=gene-SNF32_11230;Note=frameshifted;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629089.1;locus_tag=SNF32_11230;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;pseudo=true;transl_table=11 JAXGFV010000027.1 Genbank pseudogene 3941 4733 . + . ID=gene-SNF32_11235;Name=proC;gbkey=Gene;gene=proC;gene_biotype=pseudogene;locus_tag=SNF32_11235;pseudo=true JAXGFV010000027.1 Protein Homology CDS 3941 4733 . + 0 ID=cds-SNF32_11235;Parent=gene-SNF32_11235;Note=frameshifted;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734082.1;locus_tag=SNF32_11235;product=pyrroline-5-carboxylate reductase;pseudo=true;transl_table=11 JAXGFV010000027.1 Genbank gene 5228 5506 . - . ID=gene-SNF32_11240;Name=SNF32_11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11240 JAXGFV010000027.1 GeneMarkS-2+ CDS 5228 5506 . - 0 ID=cds-MDY4307642.1;Parent=gene-SNF32_11240;Dbxref=NCBI_GP:MDY4307642.1;Name=MDY4307642.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11240;product=hypothetical protein;protein_id=MDY4307642.1;transl_table=11 JAXGFV010000027.1 Genbank gene 6385 6531 . - . ID=gene-SNF32_11245;Name=SNF32_11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11245 JAXGFV010000027.1 GeneMarkS-2+ CDS 6385 6531 . - 0 ID=cds-MDY4307643.1;Parent=gene-SNF32_11245;Dbxref=NCBI_GP:MDY4307643.1;Name=MDY4307643.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11245;product=hypothetical protein;protein_id=MDY4307643.1;transl_table=11 JAXGFV010000027.1 Genbank gene 6578 6763 . - . ID=gene-SNF32_11250;Name=SNF32_11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11250 JAXGFV010000027.1 GeneMarkS-2+ CDS 6578 6763 . - 0 ID=cds-MDY4307644.1;Parent=gene-SNF32_11250;Dbxref=NCBI_GP:MDY4307644.1;Name=MDY4307644.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11250;product=hypothetical protein;protein_id=MDY4307644.1;transl_table=11 JAXGFV010000027.1 Genbank gene 6760 6969 . - . ID=gene-SNF32_11255;Name=SNF32_11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11255 JAXGFV010000027.1 GeneMarkS-2+ CDS 6760 6969 . - 0 ID=cds-MDY4307645.1;Parent=gene-SNF32_11255;Dbxref=NCBI_GP:MDY4307645.1;Name=MDY4307645.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11255;product=hypothetical protein;protein_id=MDY4307645.1;transl_table=11 JAXGFV010000027.1 Genbank gene 7119 7247 . - . ID=gene-SNF32_11260;Name=SNF32_11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11260 JAXGFV010000027.1 GeneMarkS-2+ CDS 7119 7247 . - 0 ID=cds-MDY4307646.1;Parent=gene-SNF32_11260;Dbxref=NCBI_GP:MDY4307646.1;Name=MDY4307646.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11260;product=hypothetical protein;protein_id=MDY4307646.1;transl_table=11 JAXGFV010000027.1 Genbank gene 7266 7454 . - . ID=gene-SNF32_11265;Name=SNF32_11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11265 JAXGFV010000027.1 GeneMarkS-2+ CDS 7266 7454 . - 0 ID=cds-MDY4307647.1;Parent=gene-SNF32_11265;Dbxref=NCBI_GP:MDY4307647.1;Name=MDY4307647.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11265;product=hypothetical protein;protein_id=MDY4307647.1;transl_table=11 JAXGFV010000027.1 Genbank pseudogene 7692 9246 . - . ID=gene-SNF32_11270;Name=rny;gbkey=Gene;gene=rny;gene_biotype=pseudogene;locus_tag=SNF32_11270;pseudo=true JAXGFV010000027.1 Protein Homology CDS 7692 9246 . - 0 ID=cds-SNF32_11270;Parent=gene-SNF32_11270;Note=frameshifted;Ontology_term=GO:0006402,GO:0004521;gbkey=CDS;gene=rny;go_function=RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010762250.1;locus_tag=SNF32_11270;product=ribonuclease Y;pseudo=true;transl_table=11 JAXGFV010000027.1 Genbank pseudogene 9533 10569 . - . ID=gene-SNF32_11275;Name=recA;gbkey=Gene;gene=recA;gene_biotype=pseudogene;locus_tag=SNF32_11275;pseudo=true JAXGFV010000027.1 Protein Homology CDS 9533 10569 . - 0 ID=cds-SNF32_11275;Parent=gene-SNF32_11275;Note=frameshifted;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354860.1;locus_tag=SNF32_11275;product=recombinase RecA;pseudo=true;transl_table=11 JAXGFV010000027.1 Genbank pseudogene 10619 11916 . - . ID=gene-SNF32_11280;Name=SNF32_11280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11280;pseudo=true JAXGFV010000027.1 Protein Homology CDS 10619 11916 . - 0 ID=cds-SNF32_11280;Parent=gene-SNF32_11280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016179434.1;locus_tag=SNF32_11280;product=competence/damage-inducible protein A;pseudo=true;transl_table=11 JAXGFV010000027.1 Genbank pseudogene 12142 12719 . - . ID=gene-SNF32_11285;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=pseudogene;locus_tag=SNF32_11285;pseudo=true JAXGFV010000027.1 Protein Homology CDS 12142 12719 . - 0 ID=cds-SNF32_11285;Parent=gene-SNF32_11285;Note=frameshifted;Ontology_term=GO:0008654,GO:0008444;gbkey=CDS;gene=pgsA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723896.1;locus_tag=SNF32_11285;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;pseudo=true;transl_table=11 JAXGFV010000027.1 Genbank pseudogene 12891 13776 . - . ID=gene-SNF32_11290;Name=SNF32_11290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11290;pseudo=true JAXGFV010000027.1 Protein Homology CDS 12891 13776 . - 0 ID=cds-SNF32_11290;Parent=gene-SNF32_11290;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002336597.1;locus_tag=SNF32_11290;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000027.1 Genbank pseudogene 14075 15356 . - . ID=gene-SNF32_11295;Name=SNF32_11295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11295;pseudo=true JAXGFV010000027.1 Protein Homology CDS 14075 15356 . - 0 ID=cds-SNF32_11295;Parent=gene-SNF32_11295;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287425.1;locus_tag=SNF32_11295;product=pitrilysin family protein;pseudo=true;transl_table=11 JAXGFV010000027.1 Genbank pseudogene 15349 16615 . - . ID=gene-SNF32_11300;Name=SNF32_11300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11300;pseudo=true JAXGFV010000027.1 Protein Homology CDS 15349 16615 . - 0 ID=cds-SNF32_11300;Parent=gene-SNF32_11300;Note=frameshifted;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734071.1;locus_tag=SNF32_11300;product=pitrilysin family protein;pseudo=true;transl_table=11 JAXGFV010000027.1 Genbank gene 16834 17298 . + . ID=gene-SNF32_11305;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=SNF32_11305 JAXGFV010000027.1 Protein Homology CDS 16834 17298 . + 0 ID=cds-MDY4307648.1;Parent=gene-SNF32_11305;Dbxref=NCBI_GP:MDY4307648.1;Name=MDY4307648.1;Ontology_term=GO:0006810,GO:0008381;gbkey=CDS;gene=mscL;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734070.1;locus_tag=SNF32_11305;product=large conductance mechanosensitive channel protein MscL;protein_id=MDY4307648.1;transl_table=11 JAXGFV010000027.1 Genbank pseudogene 17331 17800 . - . ID=gene-SNF32_11310;Name=SNF32_11310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11310;pseudo=true JAXGFV010000027.1 Protein Homology CDS 17331 17800 . - 0 ID=cds-SNF32_11310;Parent=gene-SNF32_11310;Note=frameshifted;Ontology_term=GO:0008080,GO:0016747;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010720628.1;locus_tag=SNF32_11310;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 JAXGFV010000027.1 Genbank gene 17859 18104 . - . ID=gene-SNF32_11315;Name=SNF32_11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11315 JAXGFV010000027.1 Protein Homology CDS 17859 18104 . - 0 ID=cds-MDY4307649.1;Parent=gene-SNF32_11315;Dbxref=NCBI_GP:MDY4307649.1;Name=MDY4307649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010750133.1;locus_tag=SNF32_11315;product=Veg family protein;protein_id=MDY4307649.1;transl_table=11 JAXGFV010000027.1 Genbank pseudogene 18219 18791 . - . ID=gene-SNF32_11320;Name=SNF32_11320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11320;pseudo=true JAXGFV010000027.1 Protein Homology CDS 18219 18791 . - 0 ID=cds-SNF32_11320;Parent=gene-SNF32_11320;Note=frameshifted;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724411.1;locus_tag=SNF32_11320;product=sigma-70 family RNA polymerase sigma factor;pseudo=true;transl_table=11 JAXGFV010000027.1 Genbank gene 18869 19396 . - . ID=gene-SNF32_11325;Name=SNF32_11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11325 JAXGFV010000027.1 Protein Homology CDS 18869 19396 . - 0 ID=cds-MDY4307650.1;Parent=gene-SNF32_11325;Dbxref=NCBI_GP:MDY4307650.1;Name=MDY4307650.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017774.3;locus_tag=SNF32_11325;product=NYN domain-containing protein;protein_id=MDY4307650.1;transl_table=11 JAXGFV010000027.1 Genbank pseudogene 19400 20230 . - . ID=gene-SNF32_11330;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=pseudogene;locus_tag=SNF32_11330;pseudo=true JAXGFV010000027.1 Protein Homology CDS 19400 20230 . - 0 ID=cds-SNF32_11330;Parent=gene-SNF32_11330;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009451,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002373371.1;locus_tag=SNF32_11330;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;pseudo=true;transl_table=11 JAXGFV010000027.1 Genbank pseudogene 20246 20649 . - . ID=gene-SNF32_11335;Name=SNF32_11335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11335;pseudo=true JAXGFV010000027.1 Protein Homology CDS 20246 20649 . - 0 ID=cds-SNF32_11335;Parent=gene-SNF32_11335;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734064.1;locus_tag=SNF32_11335;product=Mini-ribonuclease 3;pseudo=true;transl_table=11 JAXGFV010000027.1 Genbank pseudogene 20646 22055 . - . ID=gene-SNF32_11340;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=pseudogene;locus_tag=SNF32_11340;pseudo=true JAXGFV010000027.1 Protein Homology CDS 20646 22055 . - 0 ID=cds-SNF32_11340;Parent=gene-SNF32_11340;Note=frameshifted;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287445.1;locus_tag=SNF32_11340;product=cysteine--tRNA ligase;pseudo=true;transl_table=11 JAXGFV010000027.1 Genbank gene 22039 22587 . - . ID=gene-SNF32_11345;Name=epsC;gbkey=Gene;gene=epsC;gene_biotype=protein_coding;locus_tag=SNF32_11345 JAXGFV010000027.1 Protein Homology CDS 22039 22587 . - 0 ID=cds-MDY4307651.1;Parent=gene-SNF32_11345;Dbxref=NCBI_GP:MDY4307651.1;Name=MDY4307651.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=epsC;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010766870.1;locus_tag=SNF32_11345;product=serine O-acetyltransferase EpsC;protein_id=MDY4307651.1;transl_table=11 JAXGFV010000027.1 cmsearch binding_site 22670 22900 . - . ID=id-JAXGFV010000027.1:22670..22900;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.4 JAXGFV010000027.1 Genbank pseudogene 22897 24352 . - . ID=gene-SNF32_11350;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=pseudogene;locus_tag=SNF32_11350;pseudo=true JAXGFV010000027.1 Protein Homology CDS 22897 24352 . - 0 ID=cds-SNF32_11350;Parent=gene-SNF32_11350;Note=frameshifted;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287447.1;locus_tag=SNF32_11350;product=glutamate--tRNA ligase;pseudo=true;transl_table=11 JAXGFV010000027.1 Genbank gene 24675 25823 . - . ID=gene-SNF32_11355;Name=SNF32_11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11355 JAXGFV010000027.1 Protein Homology CDS 24675 25823 . - 0 ID=cds-MDY4307652.1;Parent=gene-SNF32_11355;Dbxref=NCBI_GP:MDY4307652.1;Name=MDY4307652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723035.1;locus_tag=SNF32_11355;product=PIN/TRAM domain-containing protein;protein_id=MDY4307652.1;transl_table=11 JAXGFV010000027.1 Genbank gene 25850 27232 . - . ID=gene-SNF32_11360;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=SNF32_11360 JAXGFV010000027.1 Protein Homology CDS 25850 27232 . - 0 ID=cds-MDY4307653.1;Parent=gene-SNF32_11360;Dbxref=NCBI_GP:MDY4307653.1;Name=MDY4307653.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016624348.1;locus_tag=SNF32_11360;product=DNA repair protein RadA;protein_id=MDY4307653.1;transl_table=11 JAXGFV010000027.1 Genbank pseudogene 27285 27810 . - . ID=gene-SNF32_11365;Name=SNF32_11365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11365;pseudo=true JAXGFV010000027.1 Protein Homology CDS 27285 27810 . - 0 ID=cds-SNF32_11365;Parent=gene-SNF32_11365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016631526.1;locus_tag=SNF32_11365;product=dUTP diphosphatase;pseudo=true;transl_table=11 JAXGFV010000027.1 Genbank pseudogene 28023 28825 . + . ID=gene-SNF32_11370;Name=proB;gbkey=Gene;gene=proB;gene_biotype=pseudogene;locus_tag=SNF32_11370;pseudo=true JAXGFV010000027.1 Protein Homology CDS 28023 28825 . + 0 ID=cds-SNF32_11370;Parent=gene-SNF32_11370;Note=frameshifted;Ontology_term=GO:0006561,GO:0004349;gbkey=CDS;gene=proB;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734057.1;locus_tag=SNF32_11370;product=glutamate 5-kinase;pseudo=true;transl_table=11 JAXGFV010000027.1 Genbank pseudogene 28825 30070 . + . ID=gene-SNF32_11375;Name=SNF32_11375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11375;pseudo=true JAXGFV010000027.1 Protein Homology CDS 28825 30070 . + 0 ID=cds-SNF32_11375;Parent=gene-SNF32_11375;Note=frameshifted;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002293098.1;locus_tag=SNF32_11375;product=glutamate-5-semialdehyde dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000027.1 Genbank gene 30249 30557 . - . ID=gene-SNF32_11380;Name=SNF32_11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11380 JAXGFV010000027.1 Protein Homology CDS 30249 30557 . - 0 ID=cds-MDY4307654.1;Parent=gene-SNF32_11380;Dbxref=NCBI_GP:MDY4307654.1;Name=MDY4307654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010742643.1;locus_tag=SNF32_11380;product=hypothetical protein;protein_id=MDY4307654.1;transl_table=11 JAXGFV010000027.1 Genbank pseudogene 30638 31080 . - . ID=gene-SNF32_11385;Name=SNF32_11385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11385;pseudo=true JAXGFV010000027.1 Protein Homology CDS 30638 31080 . - 0 ID=cds-SNF32_11385;Parent=gene-SNF32_11385;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005876920.1;locus_tag=SNF32_11385;product=DUF2798 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000027.1 Genbank gene 31299 31739 . + . ID=gene-SNF32_11390;Name=SNF32_11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11390 JAXGFV010000027.1 GeneMarkS-2+ CDS 31299 31739 . + 0 ID=cds-MDY4307655.1;Parent=gene-SNF32_11390;Dbxref=NCBI_GP:MDY4307655.1;Name=MDY4307655.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11390;product=hypothetical protein;protein_id=MDY4307655.1;transl_table=11 JAXGFV010000027.1 Genbank gene 31691 32134 . + . ID=gene-SNF32_11395;Name=SNF32_11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11395 JAXGFV010000027.1 GeneMarkS-2+ CDS 31691 32134 . + 0 ID=cds-MDY4307656.1;Parent=gene-SNF32_11395;Dbxref=NCBI_GP:MDY4307656.1;Name=MDY4307656.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11395;product=hypothetical protein;protein_id=MDY4307656.1;transl_table=11 ##sequence-region JAXGFV010000028.1 1 31879 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000028.1 Genbank region 1 31879 . + . ID=JAXGFV010000028.1:1..31879;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000028.1 Genbank pseudogene 371 1230 . + . ID=gene-SNF32_11400;Name=SNF32_11400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11400;pseudo=true JAXGFV010000028.1 Protein Homology CDS 371 1230 . + 0 ID=cds-SNF32_11400;Parent=gene-SNF32_11400;Note=frameshifted%3B internal stop;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734713.1;locus_tag=SNF32_11400;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000028.1 Genbank pseudogene 1379 1842 . - . ID=gene-SNF32_11405;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=pseudogene;locus_tag=SNF32_11405;pseudo=true JAXGFV010000028.1 Protein Homology CDS 1379 1842 . - 0 ID=cds-SNF32_11405;Parent=gene-SNF32_11405;Note=frameshifted;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722456.1;locus_tag=SNF32_11405;product=nucleoside-diphosphate kinase;pseudo=true;transl_table=11 JAXGFV010000028.1 cmsearch riboswitch 1985 2157 . + . ID=id-JAXGFV010000028.1:1985..2157;Dbxref=RFAM:RF00380;Note=The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria;bound_moiety=magnesium;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch JAXGFV010000028.1 Genbank pseudogene 2478 5137 . + . ID=gene-SNF32_11410;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=pseudogene;locus_tag=SNF32_11410;pseudo=true JAXGFV010000028.1 Protein Homology CDS 2478 5137 . + 0 ID=cds-SNF32_11410;Parent=gene-SNF32_11410;Note=frameshifted;Ontology_term=GO:0015693,GO:0015444;gbkey=CDS;gene=mgtA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016171124.1;locus_tag=SNF32_11410;product=magnesium-translocating P-type ATPase;pseudo=true;transl_table=11 JAXGFV010000028.1 Genbank gene 5541 5723 . - . ID=gene-SNF32_11415;Name=SNF32_11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11415 JAXGFV010000028.1 GeneMarkS-2+ CDS 5541 5723 . - 0 ID=cds-MDY4307657.1;Parent=gene-SNF32_11415;Dbxref=NCBI_GP:MDY4307657.1;Name=MDY4307657.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11415;product=hypothetical protein;protein_id=MDY4307657.1;transl_table=11 JAXGFV010000028.1 Genbank pseudogene 6548 11353 . + . ID=gene-SNF32_11420;Name=SNF32_11420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11420;pseudo=true JAXGFV010000028.1 Protein Homology CDS 6548 11353 . + 0 ID=cds-SNF32_11420;Parent=gene-SNF32_11420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734717.1;locus_tag=SNF32_11420;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000028.1 Genbank gene 11411 11719 . + . ID=gene-SNF32_11425;Name=SNF32_11425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11425 JAXGFV010000028.1 GeneMarkS-2+ CDS 11411 11719 . + 0 ID=cds-MDY4307658.1;Parent=gene-SNF32_11425;Dbxref=NCBI_GP:MDY4307658.1;Name=MDY4307658.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11425;product=hypothetical protein;protein_id=MDY4307658.1;transl_table=11 JAXGFV010000028.1 Genbank gene 11698 11766 . + . ID=gene-SNF32_11430;Name=SNF32_11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11430 JAXGFV010000028.1 Protein Homology CDS 11698 11766 . + 0 ID=cds-MDY4307659.1;Parent=gene-SNF32_11430;Dbxref=NCBI_GP:MDY4307659.1;Name=MDY4307659.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01167.1;locus_tag=SNF32_11430;product=hypothetical protein;protein_id=MDY4307659.1;transl_table=11 JAXGFV010000028.1 Genbank gene 11763 12488 . + . ID=gene-SNF32_11435;Name=SNF32_11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11435 JAXGFV010000028.1 Protein Homology CDS 11763 12488 . + 0 ID=cds-MDY4307660.1;Parent=gene-SNF32_11435;Dbxref=NCBI_GP:MDY4307660.1;Name=MDY4307660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734719.1;locus_tag=SNF32_11435;product=WxL domain-containing protein;protein_id=MDY4307660.1;transl_table=11 JAXGFV010000028.1 Genbank pseudogene 12550 13313 . + . ID=gene-SNF32_11440;Name=SNF32_11440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11440;pseudo=true JAXGFV010000028.1 Protein Homology CDS 12550 13313 . + 0 ID=cds-SNF32_11440;Parent=gene-SNF32_11440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010755245.1;locus_tag=SNF32_11440;product=WxL domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000028.1 Genbank pseudogene 13345 14065 . + . ID=gene-SNF32_11445;Name=SNF32_11445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11445;pseudo=true JAXGFV010000028.1 Protein Homology CDS 13345 14065 . + 0 ID=cds-SNF32_11445;Parent=gene-SNF32_11445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002391219.1;locus_tag=SNF32_11445;product=WxL domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000028.1 Genbank pseudogene 14261 15307 . + . ID=gene-SNF32_11450;Name=SNF32_11450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11450;pseudo=true JAXGFV010000028.1 Protein Homology CDS 14261 15307 . + 0 ID=cds-SNF32_11450;Parent=gene-SNF32_11450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010709972.1;locus_tag=SNF32_11450;product=DUF916 and DUF3324 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000028.1 Genbank gene 15428 15745 . + . ID=gene-SNF32_11455;Name=SNF32_11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11455 JAXGFV010000028.1 GeneMarkS-2+ CDS 15428 15745 . + 0 ID=cds-MDY4307661.1;Parent=gene-SNF32_11455;Dbxref=NCBI_GP:MDY4307661.1;Name=MDY4307661.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11455;product=hypothetical protein;protein_id=MDY4307661.1;transl_table=11 JAXGFV010000028.1 Genbank gene 15843 15989 . + . ID=gene-SNF32_11460;Name=SNF32_11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11460 JAXGFV010000028.1 GeneMarkS-2+ CDS 15843 15989 . + 0 ID=cds-MDY4307662.1;Parent=gene-SNF32_11460;Dbxref=NCBI_GP:MDY4307662.1;Name=MDY4307662.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11460;product=hypothetical protein;protein_id=MDY4307662.1;transl_table=11 JAXGFV010000028.1 Genbank gene 16107 16259 . + . ID=gene-SNF32_11465;Name=SNF32_11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11465 JAXGFV010000028.1 GeneMarkS-2+ CDS 16107 16259 . + 0 ID=cds-MDY4307663.1;Parent=gene-SNF32_11465;Dbxref=NCBI_GP:MDY4307663.1;Name=MDY4307663.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11465;product=hypothetical protein;protein_id=MDY4307663.1;transl_table=11 JAXGFV010000028.1 Genbank gene 16259 16411 . + . ID=gene-SNF32_11470;Name=SNF32_11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11470 JAXGFV010000028.1 Protein Homology CDS 16259 16411 . + 0 ID=cds-MDY4307664.1;Parent=gene-SNF32_11470;Dbxref=NCBI_GP:MDY4307664.1;Name=MDY4307664.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016901.3;locus_tag=SNF32_11470;product=helix-turn-helix domain-containing protein;protein_id=MDY4307664.1;transl_table=11 JAXGFV010000028.1 Genbank gene 16441 16656 . + . ID=gene-SNF32_11475;Name=SNF32_11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11475 JAXGFV010000028.1 GeneMarkS-2+ CDS 16441 16656 . + 0 ID=cds-MDY4307665.1;Parent=gene-SNF32_11475;Dbxref=NCBI_GP:MDY4307665.1;Name=MDY4307665.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11475;product=hypothetical protein;protein_id=MDY4307665.1;transl_table=11 JAXGFV010000028.1 Genbank gene 17078 17431 . + . ID=gene-SNF32_11480;Name=SNF32_11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11480 JAXGFV010000028.1 GeneMarkS-2+ CDS 17078 17431 . + 0 ID=cds-MDY4307666.1;Parent=gene-SNF32_11480;Dbxref=NCBI_GP:MDY4307666.1;Name=MDY4307666.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11480;product=hypothetical protein;protein_id=MDY4307666.1;transl_table=11 JAXGFV010000028.1 Genbank pseudogene 17544 18211 . + . ID=gene-SNF32_11485;Name=SNF32_11485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11485;pseudo=true JAXGFV010000028.1 Protein Homology CDS 17544 18211 . + 0 ID=cds-SNF32_11485;Parent=gene-SNF32_11485;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629846.1;locus_tag=SNF32_11485;product=HAD family phosphatase;pseudo=true;transl_table=11 JAXGFV010000028.1 cmsearch binding_site 18338 18572 . + . ID=id-JAXGFV010000028.1:18338..18572;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.4 JAXGFV010000028.1 cmsearch binding_site 18608 18847 . + . ID=id-JAXGFV010000028.1:18608..18847;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.4 JAXGFV010000028.1 Genbank pseudogene 18910 19980 . + . ID=gene-SNF32_11490;Name=SNF32_11490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11490;pseudo=true JAXGFV010000028.1 Protein Homology CDS 18910 19980 . + 0 ID=cds-SNF32_11490;Parent=gene-SNF32_11490;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002319048.1;locus_tag=SNF32_11490;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000028.1 Genbank gene 19982 20680 . + . ID=gene-SNF32_11495;Name=SNF32_11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11495 JAXGFV010000028.1 Protein Homology CDS 19982 20680 . + 0 ID=cds-MDY4307667.1;Parent=gene-SNF32_11495;Dbxref=NCBI_GP:MDY4307667.1;Name=MDY4307667.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002346795.1;locus_tag=SNF32_11495;product=methionine ABC transporter permease;protein_id=MDY4307667.1;transl_table=11 JAXGFV010000028.1 Genbank pseudogene 20652 21513 . + . ID=gene-SNF32_11500;Name=SNF32_11500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11500;pseudo=true JAXGFV010000028.1 Protein Homology CDS 20652 21513 . + 0 ID=cds-SNF32_11500;Parent=gene-SNF32_11500;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002293787.1;locus_tag=SNF32_11500;product=MetQ/NlpA family ABC transporter substrate-binding protein;pseudo=true;transl_table=11 JAXGFV010000028.1 Genbank pseudogene 21537 22749 . + . ID=gene-SNF32_11505;Name=SNF32_11505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11505;pseudo=true JAXGFV010000028.1 Protein Homology CDS 21537 22749 . + 0 ID=cds-SNF32_11505;Parent=gene-SNF32_11505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005877248.1;locus_tag=SNF32_11505;product=M20 family metallopeptidase;pseudo=true;transl_table=11 JAXGFV010000028.1 Genbank gene 23145 24533 . + . ID=gene-SNF32_11510;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=SNF32_11510 JAXGFV010000028.1 Protein Homology CDS 23145 24533 . + 0 ID=cds-MDY4307668.1;Parent=gene-SNF32_11510;Dbxref=NCBI_GP:MDY4307668.1;Name=MDY4307668.1;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaC;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010751617.1;locus_tag=SNF32_11510;product=Na+/H+ antiporter NhaC;protein_id=MDY4307668.1;transl_table=11 JAXGFV010000028.1 Genbank pseudogene 24834 26140 . - . ID=gene-SNF32_11515;Name=SNF32_11515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11515;pseudo=true JAXGFV010000028.1 Protein Homology CDS 24834 26140 . - 0 ID=cds-SNF32_11515;Parent=gene-SNF32_11515;Note=frameshifted;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002317954.1;locus_tag=SNF32_11515;product=amino acid permease;pseudo=true;transl_table=11 JAXGFV010000028.1 Genbank pseudogene 26490 27376 . + . ID=gene-SNF32_11520;Name=SNF32_11520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11520;pseudo=true JAXGFV010000028.1 Protein Homology CDS 26490 27376 . + 0 ID=cds-SNF32_11520;Parent=gene-SNF32_11520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002323722.1;locus_tag=SNF32_11520;product=oligosaccharide biosynthesis protein Alg14;pseudo=true;transl_table=11 JAXGFV010000028.1 Genbank pseudogene 27436 28534 . + . ID=gene-SNF32_11525;Name=SNF32_11525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11525;pseudo=true JAXGFV010000028.1 Protein Homology CDS 27436 28534 . + 0 ID=cds-SNF32_11525;Parent=gene-SNF32_11525;Note=frameshifted;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734733.1;locus_tag=SNF32_11525;product=glycerate kinase;pseudo=true;transl_table=11 JAXGFV010000028.1 Genbank pseudogene 28786 30293 . + . ID=gene-SNF32_11530;Name=abc-f;gbkey=Gene;gene=abc-f;gene_biotype=pseudogene;locus_tag=SNF32_11530;pseudo=true JAXGFV010000028.1 Protein Homology CDS 28786 30293 . + 0 ID=cds-SNF32_11530;Parent=gene-SNF32_11530;Note=frameshifted;Ontology_term=GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=abc-f;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734734.1;locus_tag=SNF32_11530;product=ABC-F type ribosomal protection protein;pseudo=true;transl_table=11 JAXGFV010000028.1 Genbank pseudogene 30398 30924 . + . ID=gene-SNF32_11535;Name=SNF32_11535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11535;pseudo=true JAXGFV010000028.1 Protein Homology CDS 30398 30924 . + 0 ID=cds-SNF32_11535;Parent=gene-SNF32_11535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002333780.1;locus_tag=SNF32_11535;product=histidine phosphatase family protein;pseudo=true;transl_table=11 JAXGFV010000028.1 Genbank gene 31127 31660 . + . ID=gene-SNF32_11540;Name=SNF32_11540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11540 JAXGFV010000028.1 Protein Homology CDS 31127 31660 . + 0 ID=cds-MDY4307669.1;Parent=gene-SNF32_11540;Dbxref=NCBI_GP:MDY4307669.1;Name=MDY4307669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723609.1;locus_tag=SNF32_11540;product=polymer-forming cytoskeletal protein;protein_id=MDY4307669.1;transl_table=11 ##sequence-region JAXGFV010000029.1 1 31496 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000029.1 Genbank region 1 31496 . + . ID=JAXGFV010000029.1:1..31496;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000029.1 Genbank pseudogene 534 1986 . - . ID=gene-SNF32_11545;Name=SNF32_11545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11545;pseudo=true JAXGFV010000029.1 Protein Homology CDS 534 1986 . - 0 ID=cds-SNF32_11545;Parent=gene-SNF32_11545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005237173.1;locus_tag=SNF32_11545;product=HAMP domain-containing histidine kinase;pseudo=true;transl_table=11 JAXGFV010000029.1 Genbank gene 2030 2716 . - . ID=gene-SNF32_11550;Name=SNF32_11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11550 JAXGFV010000029.1 Protein Homology CDS 2030 2716 . - 0 ID=cds-MDY4307670.1;Parent=gene-SNF32_11550;Dbxref=NCBI_GP:MDY4307670.1;Name=MDY4307670.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010763438.1;locus_tag=SNF32_11550;product=response regulator transcription factor;protein_id=MDY4307670.1;transl_table=11 JAXGFV010000029.1 Genbank pseudogene 2907 4327 . - . ID=gene-SNF32_11555;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=pseudogene;locus_tag=SNF32_11555;pseudo=true JAXGFV010000029.1 Protein Homology CDS 2907 4327 . - 0 ID=cds-SNF32_11555;Parent=gene-SNF32_11555;Note=frameshifted;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002342997.1;locus_tag=SNF32_11555;product=NADP-dependent phosphogluconate dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000029.1 Genbank pseudogene 4533 4711 . - . ID=gene-SNF32_11560;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=pseudogene;locus_tag=SNF32_11560;pseudo=true JAXGFV010000029.1 Protein Homology CDS 4533 4711 . - 0 ID=cds-SNF32_11560;Parent=gene-SNF32_11560;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010719637.1;locus_tag=SNF32_11560;product=50S ribosomal protein L32;pseudo=true;transl_table=11 JAXGFV010000029.1 Genbank pseudogene 4769 5337 . - . ID=gene-SNF32_11565;Name=SNF32_11565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11565;pseudo=true JAXGFV010000029.1 Protein Homology CDS 4769 5337 . - 0 ID=cds-SNF32_11565;Parent=gene-SNF32_11565;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875033.1;locus_tag=SNF32_11565;product=DUF177 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000029.1 Genbank gene 5512 6471 . - . ID=gene-SNF32_11570;Name=SNF32_11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11570 JAXGFV010000029.1 Protein Homology CDS 5512 6471 . - 0 ID=cds-MDY4307671.1;Parent=gene-SNF32_11570;Dbxref=NCBI_GP:MDY4307671.1;Name=MDY4307671.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003688539.1;locus_tag=SNF32_11570;product=AEC family transporter;protein_id=MDY4307671.1;transl_table=11 JAXGFV010000029.1 Genbank pseudogene 6710 7598 . + . ID=gene-SNF32_11575;Name=SNF32_11575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11575;pseudo=true JAXGFV010000029.1 Protein Homology CDS 6710 7598 . + 0 ID=cds-SNF32_11575;Parent=gene-SNF32_11575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723060.1;locus_tag=SNF32_11575;product=LysR substrate-binding domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000029.1 Genbank pseudogene 7678 9443 . - . ID=gene-SNF32_11580;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=pseudogene;locus_tag=SNF32_11580;pseudo=true JAXGFV010000029.1 Protein Homology CDS 7678 9443 . - 0 ID=cds-SNF32_11580;Parent=gene-SNF32_11580;Note=frameshifted;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003127858.1;locus_tag=SNF32_11580;product=pyruvate kinase;pseudo=true;transl_table=11 JAXGFV010000029.1 Genbank pseudogene 9586 10545 . - . ID=gene-SNF32_11585;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=pseudogene;locus_tag=SNF32_11585;pseudo=true JAXGFV010000029.1 Protein Homology CDS 9586 10545 . - 0 ID=cds-SNF32_11585;Parent=gene-SNF32_11585;Note=frameshifted;Ontology_term=GO:0006096;gbkey=CDS;gene=pfkA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010746303.1;locus_tag=SNF32_11585;product=6-phosphofructokinase;pseudo=true;transl_table=11 JAXGFV010000029.1 Genbank pseudogene 10710 14012 . - . ID=gene-SNF32_11590;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=pseudogene;locus_tag=SNF32_11590;pseudo=true JAXGFV010000029.1 Protein Homology CDS 10710 14012 . - 0 ID=cds-SNF32_11590;Parent=gene-SNF32_11590;Note=frameshifted;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002319208.1;locus_tag=SNF32_11590;product=DNA polymerase III subunit alpha;pseudo=true;transl_table=11 JAXGFV010000029.1 Genbank gene 14235 14429 . + . ID=gene-SNF32_11595;Name=SNF32_11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11595 JAXGFV010000029.1 Protein Homology CDS 14235 14429 . + 0 ID=cds-MDY4307672.1;Parent=gene-SNF32_11595;Dbxref=NCBI_GP:MDY4307672.1;Name=MDY4307672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735843.1;locus_tag=SNF32_11595;product=YjzD family protein;protein_id=MDY4307672.1;transl_table=11 JAXGFV010000029.1 Genbank pseudogene 14474 15657 . - . ID=gene-SNF32_11600;Name=SNF32_11600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11600;pseudo=true JAXGFV010000029.1 Protein Homology CDS 14474 15657 . - 0 ID=cds-SNF32_11600;Parent=gene-SNF32_11600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010764732.1;locus_tag=SNF32_11600;product=multidrug efflux MFS transporter;pseudo=true;transl_table=11 JAXGFV010000029.1 Genbank pseudogene 15824 17258 . - . ID=gene-SNF32_11605;Name=SNF32_11605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11605;pseudo=true JAXGFV010000029.1 Protein Homology CDS 15824 17258 . - 0 ID=cds-SNF32_11605;Parent=gene-SNF32_11605;Note=frameshifted;Ontology_term=GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002290956.1;locus_tag=SNF32_11605;product=NCS2 family permease;pseudo=true;transl_table=11 JAXGFV010000029.1 Genbank pseudogene 17548 18355 . + . ID=gene-SNF32_11610;Name=SNF32_11610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11610;pseudo=true JAXGFV010000029.1 Protein Homology CDS 17548 18355 . + 0 ID=cds-SNF32_11610;Parent=gene-SNF32_11610;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002295364.1;locus_tag=SNF32_11610;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11 JAXGFV010000029.1 Genbank pseudogene 18509 20661 . - . ID=gene-SNF32_11615;Name=SNF32_11615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11615;pseudo=true JAXGFV010000029.1 Protein Homology CDS 18509 20661 . - 0 ID=cds-SNF32_11615;Parent=gene-SNF32_11615;Note=frameshifted;Ontology_term=GO:0009252,GO:0008658,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016625449.1;locus_tag=SNF32_11615;product=penicillin-binding protein 2;pseudo=true;transl_table=11 JAXGFV010000029.1 Genbank pseudogene 20914 21756 . - . ID=gene-SNF32_11620;Name=SNF32_11620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11620;pseudo=true JAXGFV010000029.1 Protein Homology CDS 20914 21756 . - 0 ID=cds-SNF32_11620;Parent=gene-SNF32_11620;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735849.1;locus_tag=SNF32_11620;product=MurR/RpiR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000029.1 Genbank gene 22150 22398 . - . ID=gene-SNF32_11625;Name=SNF32_11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11625 JAXGFV010000029.1 GeneMarkS-2+ CDS 22150 22398 . - 0 ID=cds-MDY4307673.1;Parent=gene-SNF32_11625;Dbxref=NCBI_GP:MDY4307673.1;Name=MDY4307673.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11625;product=hypothetical protein;protein_id=MDY4307673.1;transl_table=11 JAXGFV010000029.1 Genbank gene 22545 22766 . - . ID=gene-SNF32_11630;Name=SNF32_11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11630 JAXGFV010000029.1 Protein Homology CDS 22545 22766 . - 0 ID=cds-MDY4307674.1;Parent=gene-SNF32_11630;Dbxref=NCBI_GP:MDY4307674.1;Name=MDY4307674.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024242.3;locus_tag=SNF32_11630;product=helix-turn-helix domain-containing protein;protein_id=MDY4307674.1;transl_table=11 JAXGFV010000029.1 Genbank gene 22793 23194 . - . ID=gene-SNF32_11635;Name=SNF32_11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11635 JAXGFV010000029.1 Protein Homology CDS 22793 23194 . - 0 ID=cds-MDY4307675.1;Parent=gene-SNF32_11635;Dbxref=NCBI_GP:MDY4307675.1;Name=MDY4307675.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042696.1;locus_tag=SNF32_11635;product=DUF6597 domain-containing transcriptional factor;protein_id=MDY4307675.1;transl_table=11 JAXGFV010000029.1 Genbank pseudogene 23457 25389 . - . ID=gene-SNF32_11640;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=pseudogene;locus_tag=SNF32_11640;pseudo=true JAXGFV010000029.1 Protein Homology CDS 23457 25389 . - 0 ID=cds-SNF32_11640;Parent=gene-SNF32_11640;Note=frameshifted;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723795.1;locus_tag=SNF32_11640;product=threonine--tRNA ligase;pseudo=true;transl_table=11 JAXGFV010000029.1 Genbank gene 25709 25891 . - . ID=gene-SNF32_11645;Name=SNF32_11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11645 JAXGFV010000029.1 Protein Homology CDS 25709 25891 . - 0 ID=cds-MDY4307676.1;Parent=gene-SNF32_11645;Dbxref=NCBI_GP:MDY4307676.1;Name=MDY4307676.1;Ontology_term=GO:0006725,GO:0016862;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016252354.1;locus_tag=SNF32_11645;product=2-hydroxymuconate tautomerase;protein_id=MDY4307676.1;transl_table=11 JAXGFV010000029.1 Genbank pseudogene 26016 27810 . - . ID=gene-SNF32_11650;Name=SNF32_11650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11650;pseudo=true JAXGFV010000029.1 Protein Homology CDS 26016 27810 . - 0 ID=cds-SNF32_11650;Parent=gene-SNF32_11650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003577309.1;locus_tag=SNF32_11650;product=heavy metal translocating P-type ATPase;pseudo=true;transl_table=11 JAXGFV010000029.1 Genbank pseudogene 28007 30283 . + . ID=gene-SNF32_11655;Name=helD;gbkey=Gene;gene=helD;gene_biotype=pseudogene;locus_tag=SNF32_11655;pseudo=true JAXGFV010000029.1 Protein Homology CDS 28007 30283 . + 0 ID=cds-SNF32_11655;Parent=gene-SNF32_11655;Note=frameshifted;gbkey=CDS;gene=helD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735855.1;locus_tag=SNF32_11655;product=RNA polymerase recycling motor HelD;pseudo=true;transl_table=11 JAXGFV010000029.1 Genbank pseudogene 30481 31118 . - . ID=gene-SNF32_11660;Name=SNF32_11660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11660;pseudo=true JAXGFV010000029.1 Protein Homology CDS 30481 31118 . - 0 ID=cds-SNF32_11660;Parent=gene-SNF32_11660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724515.1;locus_tag=SNF32_11660;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000003.1 1 156935 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000003.1 Genbank region 1 156935 . + . ID=JAXGFV010000003.1:1..156935;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000003.1 Genbank gene 548 2158 . + . ID=gene-SNF32_02215;Name=SNF32_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02215 JAXGFV010000003.1 Protein Homology CDS 548 2158 . + 0 ID=cds-MDY4306679.1;Parent=gene-SNF32_02215;Dbxref=NCBI_GP:MDY4306679.1;Name=MDY4306679.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008267774.1;locus_tag=SNF32_02215;product=CTP synthase;protein_id=MDY4306679.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 2419 3287 . + . ID=gene-SNF32_02220;Name=SNF32_02220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02220;pseudo=true JAXGFV010000003.1 Protein Homology CDS 2419 3287 . + 0 ID=cds-SNF32_02220;Parent=gene-SNF32_02220;Note=frameshifted;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010753191.1;locus_tag=SNF32_02220;product=class II fructose-bisphosphate aldolase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 3468 4730 . + . ID=gene-SNF32_02225;Name=SNF32_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02225 JAXGFV010000003.1 Protein Homology CDS 3468 4730 . + 0 ID=cds-MDY4306680.1;Parent=gene-SNF32_02225;Dbxref=NCBI_GP:MDY4306680.1;Name=MDY4306680.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010767022.1;locus_tag=SNF32_02225;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=MDY4306680.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 4727 6011 . + . ID=gene-SNF32_02230;Name=rho;gbkey=Gene;gene=rho;gene_biotype=pseudogene;locus_tag=SNF32_02230;pseudo=true JAXGFV010000003.1 Protein Homology CDS 4727 6011 . + 0 ID=cds-SNF32_02230;Parent=gene-SNF32_02230;Note=frameshifted;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002342248.1;locus_tag=SNF32_02230;product=transcription termination factor Rho;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 6116 6379 . + . ID=gene-SNF32_02235;Name=SNF32_02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02235 JAXGFV010000003.1 Protein Homology CDS 6116 6379 . + 0 ID=cds-MDY4306681.1;Parent=gene-SNF32_02235;Dbxref=NCBI_GP:MDY4306681.1;Name=MDY4306681.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016174397.1;locus_tag=SNF32_02235;product=type B 50S ribosomal protein L31;protein_id=MDY4306681.1;transl_table=11 JAXGFV010000003.1 Genbank gene 7067 8371 . + . ID=gene-SNF32_02240;Name=SNF32_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02240 JAXGFV010000003.1 Protein Homology CDS 7067 8371 . + 0 ID=cds-MDY4306682.1;Parent=gene-SNF32_02240;Dbxref=NCBI_GP:MDY4306682.1;Name=MDY4306682.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024794.3;locus_tag=SNF32_02240;product=M60 family metallopeptidase;protein_id=MDY4306682.1;transl_table=11 JAXGFV010000003.1 Genbank gene 8400 8699 . + . ID=gene-SNF32_02245;Name=SNF32_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02245 JAXGFV010000003.1 Protein Homology CDS 8400 8699 . + 0 ID=cds-MDY4306683.1;Parent=gene-SNF32_02245;Dbxref=NCBI_GP:MDY4306683.1;Name=MDY4306683.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF012271.3;locus_tag=SNF32_02245;product=fibronectin type III domain-containing protein;protein_id=MDY4306683.1;transl_table=11 JAXGFV010000003.1 Genbank gene 8696 9283 . + . ID=gene-SNF32_02250;Name=SNF32_02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02250 JAXGFV010000003.1 Protein Homology CDS 8696 9283 . + 0 ID=cds-MDY4306684.1;Parent=gene-SNF32_02250;Dbxref=NCBI_GP:MDY4306684.1;Name=MDY4306684.1;Ontology_term=GO:0005975,GO:0004553,GO:0030246,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF014853.3;locus_tag=SNF32_02250;product=carbohydrate-binding protein;protein_id=MDY4306684.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 9478 10742 . - . ID=gene-SNF32_02255;Name=SNF32_02255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02255;pseudo=true JAXGFV010000003.1 Protein Homology CDS 9478 10742 . - 0 ID=cds-SNF32_02255;Parent=gene-SNF32_02255;Note=frameshifted;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005229683.1;locus_tag=SNF32_02255;product=PTS transporter subunit EIIC;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 10770 11075 . - . ID=gene-SNF32_02260;Name=SNF32_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02260 JAXGFV010000003.1 Protein Homology CDS 10770 11075 . - 0 ID=cds-MDY4306685.1;Parent=gene-SNF32_02260;Dbxref=NCBI_GP:MDY4306685.1;Name=MDY4306685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736056.1;locus_tag=SNF32_02260;product=hypothetical protein;protein_id=MDY4306685.1;transl_table=11 JAXGFV010000003.1 Genbank gene 11300 12079 . - . ID=gene-SNF32_02265;Name=SNF32_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02265 JAXGFV010000003.1 Protein Homology CDS 11300 12079 . - 0 ID=cds-MDY4306686.1;Parent=gene-SNF32_02265;Dbxref=NCBI_GP:MDY4306686.1;Name=MDY4306686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016628026.1;locus_tag=SNF32_02265;product=TPM domain-containing protein;protein_id=MDY4306686.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 12099 13288 . - . ID=gene-SNF32_02270;Name=SNF32_02270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02270;pseudo=true JAXGFV010000003.1 Protein Homology CDS 12099 13288 . - 0 ID=cds-SNF32_02270;Parent=gene-SNF32_02270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002344032.1;locus_tag=SNF32_02270;product=TFIIB-type zinc ribbon-containing protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 13306 14551 . - . ID=gene-SNF32_02275;Name=SNF32_02275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02275;pseudo=true JAXGFV010000003.1 Protein Homology CDS 13306 14551 . - 0 ID=cds-SNF32_02275;Parent=gene-SNF32_02275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002338701.1;locus_tag=SNF32_02275;product=SPFH domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 15012 16748 . + . ID=gene-SNF32_02280;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=SNF32_02280 JAXGFV010000003.1 Protein Homology CDS 15012 16748 . + 0 ID=cds-MDY4306687.1;Parent=gene-SNF32_02280;Dbxref=NCBI_GP:MDY4306687.1;Name=MDY4306687.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002315431.1;locus_tag=SNF32_02280;product=DNA polymerase III subunit gamma/tau;protein_id=MDY4306687.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 16767 17076 . + . ID=gene-SNF32_02285;Name=SNF32_02285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02285;pseudo=true JAXGFV010000003.1 Protein Homology CDS 16767 17076 . + 0 ID=cds-SNF32_02285;Parent=gene-SNF32_02285;Note=frameshifted;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002292337.1;locus_tag=SNF32_02285;product=YbaB/EbfC family nucleoid-associated protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 17100 17696 . + . ID=gene-SNF32_02290;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=SNF32_02290 JAXGFV010000003.1 Protein Homology CDS 17100 17696 . + 0 ID=cds-MDY4306688.1;Parent=gene-SNF32_02290;Dbxref=NCBI_GP:MDY4306688.1;Name=MDY4306688.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002329007.1;locus_tag=SNF32_02290;product=recombination mediator RecR;protein_id=MDY4306688.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 17785 18446 . + . ID=gene-SNF32_02295;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=pseudogene;locus_tag=SNF32_02295;pseudo=true JAXGFV010000003.1 Protein Homology CDS 17785 18446 . + 0 ID=cds-SNF32_02295;Parent=gene-SNF32_02295;Note=frameshifted;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736049.1;locus_tag=SNF32_02295;product=dTMP kinase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 18443 18771 . + . ID=gene-SNF32_02300;Name=SNF32_02300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02300;pseudo=true JAXGFV010000003.1 Protein Homology CDS 18443 18771 . + 0 ID=cds-SNF32_02300;Parent=gene-SNF32_02300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005878277.1;locus_tag=SNF32_02300;product=cyclic-di-AMP receptor;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 18780 19760 . + . ID=gene-SNF32_02305;Name=holB;gbkey=Gene;gene=holB;gene_biotype=pseudogene;locus_tag=SNF32_02305;pseudo=true JAXGFV010000003.1 Protein Homology CDS 18780 19760 . + 0 ID=cds-SNF32_02305;Parent=gene-SNF32_02305;Note=frameshifted;Ontology_term=GO:0006260,GO:0003887,GO:0008408;gbkey=CDS;gene=holB;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010760521.1;locus_tag=SNF32_02305;product=DNA polymerase III subunit delta';pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 19754 20574 . + . ID=gene-SNF32_02310;Name=SNF32_02310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02310;pseudo=true JAXGFV010000003.1 Protein Homology CDS 19754 20574 . + 0 ID=cds-SNF32_02310;Parent=gene-SNF32_02310;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002332104.1;locus_tag=SNF32_02310;product=stage 0 sporulation family protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 20567 20913 . + . ID=gene-SNF32_02315;Name=SNF32_02315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02315;pseudo=true JAXGFV010000003.1 Protein Homology CDS 20567 20913 . + 0 ID=cds-SNF32_02315;Parent=gene-SNF32_02315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003127096.1;locus_tag=SNF32_02315;product=DNA replication initiation control protein YabA;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 21053 21921 . + . ID=gene-SNF32_02320;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=pseudogene;locus_tag=SNF32_02320;pseudo=true JAXGFV010000003.1 Protein Homology CDS 21053 21921 . + 0 ID=cds-SNF32_02320;Parent=gene-SNF32_02320;Note=frameshifted;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724131.1;locus_tag=SNF32_02320;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 22183 22488 . - . ID=gene-SNF32_02325;Name=SNF32_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02325 JAXGFV010000003.1 GeneMarkS-2+ CDS 22183 22488 . - 0 ID=cds-MDY4306689.1;Parent=gene-SNF32_02325;Dbxref=NCBI_GP:MDY4306689.1;Name=MDY4306689.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02325;product=hypothetical protein;protein_id=MDY4306689.1;transl_table=11 JAXGFV010000003.1 Genbank gene 22433 22666 . - . ID=gene-SNF32_02330;Name=SNF32_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02330 JAXGFV010000003.1 GeneMarkS-2+ CDS 22433 22666 . - 0 ID=cds-MDY4306690.1;Parent=gene-SNF32_02330;Dbxref=NCBI_GP:MDY4306690.1;Name=MDY4306690.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02330;product=hypothetical protein;protein_id=MDY4306690.1;transl_table=11 JAXGFV010000003.1 Genbank gene 22805 23164 . - . ID=gene-SNF32_02335;Name=SNF32_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02335 JAXGFV010000003.1 GeneMarkS-2+ CDS 22805 23164 . - 0 ID=cds-MDY4306691.1;Parent=gene-SNF32_02335;Dbxref=NCBI_GP:MDY4306691.1;Name=MDY4306691.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02335;product=hypothetical protein;protein_id=MDY4306691.1;transl_table=11 JAXGFV010000003.1 Genbank gene 23613 23759 . + . ID=gene-SNF32_02340;Name=SNF32_02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02340 JAXGFV010000003.1 GeneMarkS-2+ CDS 23613 23759 . + 0 ID=cds-MDY4306692.1;Parent=gene-SNF32_02340;Dbxref=NCBI_GP:MDY4306692.1;Name=MDY4306692.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02340;product=hypothetical protein;protein_id=MDY4306692.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 23759 24632 . + . ID=gene-SNF32_02345;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=pseudogene;locus_tag=SNF32_02345;pseudo=true JAXGFV010000003.1 Protein Homology CDS 23759 24632 . + 0 ID=cds-SNF32_02345;Parent=gene-SNF32_02345;Note=frameshifted;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: protein motif:HMM:NF013015.3;locus_tag=SNF32_02345;product=DNA polymerase IV;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 24877 25471 . - . ID=gene-SNF32_02350;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=pseudogene;locus_tag=SNF32_02350;pseudo=true JAXGFV010000003.1 Protein Homology CDS 24877 25471 . - 0 ID=cds-SNF32_02350;Parent=gene-SNF32_02350;Note=frameshifted;Ontology_term=GO:0009265,GO:0051353,GO:0051539;gbkey=CDS;gene=nrdG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA,positive regulation of oxidoreductase activity|0051353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005878087.1;locus_tag=SNF32_02350;product=anaerobic ribonucleoside-triphosphate reductase activating protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 25955 26455 . - . ID=gene-SNF32_02355;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=pseudogene;locus_tag=SNF32_02355;pseudo=true JAXGFV010000003.1 Protein Homology CDS 25955 26455 . - 0 ID=cds-SNF32_02355;Parent=gene-SNF32_02355;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006260,GO:0008998,GO:0016491;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase activity|0008998||IEA,oxidoreductase activity|0016491||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF024984.3;locus_tag=SNF32_02355;product=anaerobic ribonucleoside-triphosphate reductase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 26506 27684 . - . ID=gene-SNF32_02360;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=pseudogene;locus_tag=SNF32_02360;pseudo=true JAXGFV010000003.1 Protein Homology CDS 26506 27684 . - 0 ID=cds-SNF32_02360;Parent=gene-SNF32_02360;Note=internal stop;Ontology_term=GO:0009265,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase activity|0008998||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: protein motif:HMM:NF024984.3;locus_tag=SNF32_02360;product=anaerobic ribonucleoside-triphosphate reductase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 27671 27823 . + . ID=gene-SNF32_02365;Name=SNF32_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02365 JAXGFV010000003.1 GeneMarkS-2+ CDS 27671 27823 . + 0 ID=cds-MDY4306693.1;Parent=gene-SNF32_02365;Dbxref=NCBI_GP:MDY4306693.1;Name=MDY4306693.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02365;product=hypothetical protein;protein_id=MDY4306693.1;transl_table=11 JAXGFV010000003.1 Genbank gene 27840 28082 . - . ID=gene-SNF32_02370;Name=SNF32_02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02370 JAXGFV010000003.1 Protein Homology CDS 27840 28082 . - 0 ID=cds-MDY4306694.1;Parent=gene-SNF32_02370;Dbxref=NCBI_GP:MDY4306694.1;Name=MDY4306694.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015442.3;locus_tag=SNF32_02370;product=ATP cone domain-containing protein;protein_id=MDY4306694.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 28458 29220 . + . ID=gene-SNF32_02375;Name=SNF32_02375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02375;pseudo=true JAXGFV010000003.1 Protein Homology CDS 28458 29220 . + 0 ID=cds-SNF32_02375;Parent=gene-SNF32_02375;Note=frameshifted%3B internal stop;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002310242.1;locus_tag=SNF32_02375;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 29318 29563 . + . ID=gene-SNF32_02380;Name=SNF32_02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02380 JAXGFV010000003.1 Protein Homology CDS 29318 29563 . + 0 ID=cds-MDY4306695.1;Parent=gene-SNF32_02380;Dbxref=NCBI_GP:MDY4306695.1;Name=MDY4306695.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF014717.3;locus_tag=SNF32_02380;product=FtsX-like permease family protein;protein_id=MDY4306695.1;transl_table=11 JAXGFV010000003.1 Genbank gene 29744 29914 . + . ID=gene-SNF32_02385;Name=SNF32_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02385 JAXGFV010000003.1 GeneMarkS-2+ CDS 29744 29914 . + 0 ID=cds-MDY4306696.1;Parent=gene-SNF32_02385;Dbxref=NCBI_GP:MDY4306696.1;Name=MDY4306696.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02385;product=hypothetical protein;protein_id=MDY4306696.1;transl_table=11 JAXGFV010000003.1 Genbank gene 30052 30939 . + . ID=gene-SNF32_02390;Name=SNF32_02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02390 JAXGFV010000003.1 GeneMarkS-2+ CDS 30052 30939 . + 0 ID=cds-MDY4306697.1;Parent=gene-SNF32_02390;Dbxref=NCBI_GP:MDY4306697.1;Name=MDY4306697.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02390;product=hypothetical protein;protein_id=MDY4306697.1;transl_table=11 JAXGFV010000003.1 Genbank gene 30936 31100 . + . ID=gene-SNF32_02395;Name=SNF32_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02395 JAXGFV010000003.1 GeneMarkS-2+ CDS 30936 31100 . + 0 ID=cds-MDY4306698.1;Parent=gene-SNF32_02395;Dbxref=NCBI_GP:MDY4306698.1;Name=MDY4306698.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02395;product=hypothetical protein;protein_id=MDY4306698.1;transl_table=11 JAXGFV010000003.1 Genbank gene 31097 31264 . + . ID=gene-SNF32_02400;Name=SNF32_02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02400 JAXGFV010000003.1 GeneMarkS-2+ CDS 31097 31264 . + 0 ID=cds-MDY4306699.1;Parent=gene-SNF32_02400;Dbxref=NCBI_GP:MDY4306699.1;Name=MDY4306699.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02400;product=hypothetical protein;protein_id=MDY4306699.1;transl_table=11 JAXGFV010000003.1 Genbank gene 31472 31621 . + . ID=gene-SNF32_02405;Name=SNF32_02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02405 JAXGFV010000003.1 Protein Homology CDS 31472 31621 . + 0 ID=cds-MDY4306700.1;Parent=gene-SNF32_02405;Dbxref=NCBI_GP:MDY4306700.1;Name=MDY4306700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002338698.1;locus_tag=SNF32_02405;product=teichoic acid D-Ala incorporation-associated protein DltX;protein_id=MDY4306700.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 31632 33129 . + . ID=gene-SNF32_02410;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=pseudogene;locus_tag=SNF32_02410;pseudo=true JAXGFV010000003.1 Protein Homology CDS 31632 33129 . + 0 ID=cds-SNF32_02410;Parent=gene-SNF32_02410;Note=frameshifted;Ontology_term=GO:0019350,GO:0047473;gbkey=CDS;gene=dltA;go_function=D-alanine [D-alanyl carrier protein] ligase activity|0047473||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723767.1;locus_tag=SNF32_02410;product=D-alanine--poly(phosphoribitol) ligase subunit DltA;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 33129 34329 . + . ID=gene-SNF32_02415;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=pseudogene;locus_tag=SNF32_02415;pseudo=true JAXGFV010000003.1 Protein Homology CDS 33129 34329 . + 0 ID=cds-SNF32_02415;Parent=gene-SNF32_02415;Note=frameshifted;Ontology_term=GO:0070395,GO:0016746;gbkey=CDS;gene=dltB;go_function=acyltransferase activity|0016746||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002336916.1;locus_tag=SNF32_02415;product=D-alanyl-lipoteichoic acid biosynthesis protein DltB;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 34353 34586 . + . ID=gene-SNF32_02420;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=SNF32_02420 JAXGFV010000003.1 Protein Homology CDS 34353 34586 . + 0 ID=cds-MDY4306701.1;Parent=gene-SNF32_02420;Dbxref=NCBI_GP:MDY4306701.1;Name=MDY4306701.1;Ontology_term=GO:0019350,GO:0036370;gbkey=CDS;gene=dltC;go_function=D-alanyl carrier activity|0036370||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002310246.1;locus_tag=SNF32_02420;product=D-alanine--poly(phosphoribitol) ligase subunit DltC;protein_id=MDY4306701.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 34779 35068 . + . ID=gene-SNF32_02425;Name=SNF32_02425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02425;pseudo=true JAXGFV010000003.1 Protein Homology CDS 34779 35068 . + 0 ID=cds-SNF32_02425;Parent=gene-SNF32_02425;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016782.3;locus_tag=SNF32_02425;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 35196 35327 . + . ID=gene-SNF32_02430;Name=SNF32_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02430 JAXGFV010000003.1 GeneMarkS-2+ CDS 35196 35327 . + 0 ID=cds-MDY4306702.1;Parent=gene-SNF32_02430;Dbxref=NCBI_GP:MDY4306702.1;Name=MDY4306702.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02430;product=hypothetical protein;protein_id=MDY4306702.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 35341 35846 . + . ID=gene-SNF32_02435;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=pseudogene;locus_tag=SNF32_02435;pseudo=true JAXGFV010000003.1 Protein Homology CDS 35341 35846 . + 0 ID=cds-SNF32_02435;Parent=gene-SNF32_02435;Note=frameshifted;Ontology_term=GO:0070394;gbkey=CDS;gene=dltD;go_process=lipoteichoic acid metabolic process|0070394||IEA;inference=COORDINATES: protein motif:HMM:NF016782.3;locus_tag=SNF32_02435;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 36066 37148 . + . ID=gene-SNF32_02440;Name=SNF32_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02440 JAXGFV010000003.1 Protein Homology CDS 36066 37148 . + 0 ID=cds-MDY4306703.1;Parent=gene-SNF32_02440;Dbxref=NCBI_GP:MDY4306703.1;Name=MDY4306703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016628031.1;locus_tag=SNF32_02440;product=M42 family metallopeptidase;protein_id=MDY4306703.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 37165 37940 . + . ID=gene-SNF32_02445;Name=SNF32_02445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02445;pseudo=true JAXGFV010000003.1 Protein Homology CDS 37165 37940 . + 0 ID=cds-SNF32_02445;Parent=gene-SNF32_02445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005881123.1;locus_tag=SNF32_02445;product=DUF975 family protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 38002 38740 . + . ID=gene-SNF32_02450;Name=SNF32_02450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02450;pseudo=true JAXGFV010000003.1 Protein Homology CDS 38002 38740 . + 0 ID=cds-SNF32_02450;Parent=gene-SNF32_02450;Note=frameshifted;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002341957.1;locus_tag=SNF32_02450;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 38754 39757 . + . ID=gene-SNF32_02455;Name=SNF32_02455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02455;pseudo=true JAXGFV010000003.1 Protein Homology CDS 38754 39757 . + 0 ID=cds-SNF32_02455;Parent=gene-SNF32_02455;Note=frameshifted;Ontology_term=GO:0036211,GO:0017118;gbkey=CDS;go_function=lipoyltransferase activity|0017118||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016631995.1;locus_tag=SNF32_02455;product=lipoate--protein ligase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 40012 41809 . - . ID=gene-SNF32_02460;Name=SNF32_02460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02460;pseudo=true JAXGFV010000003.1 Protein Homology CDS 40012 41809 . - 0 ID=cds-SNF32_02460;Parent=gene-SNF32_02460;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016631160.1;locus_tag=SNF32_02460;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 42005 42577 . + . ID=gene-SNF32_02465;Name=SNF32_02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02465 JAXGFV010000003.1 Protein Homology CDS 42005 42577 . + 0 ID=cds-MDY4306704.1;Parent=gene-SNF32_02465;Dbxref=NCBI_GP:MDY4306704.1;Name=MDY4306704.1;Ontology_term=GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005881114.1;locus_tag=SNF32_02465;product=signal peptidase I;protein_id=MDY4306704.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 42614 43295 . + . ID=gene-SNF32_02470;Name=SNF32_02470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02470;pseudo=true JAXGFV010000003.1 Protein Homology CDS 42614 43295 . + 0 ID=cds-SNF32_02470;Parent=gene-SNF32_02470;Note=frameshifted;Ontology_term=GO:0032259,GO:0008757,GO:1904047;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002343050.1;locus_tag=SNF32_02470;product=O-methyltransferase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 43626 43699 . + . ID=gene-SNF32_02475;Name=SNF32_02475;gbkey=Gene;gene_biotype=tRNA;locus_tag=SNF32_02475 JAXGFV010000003.1 tRNAscan-SE tRNA 43626 43699 . + . ID=rna-SNF32_02475;Parent=gene-SNF32_02475;anticodon=(pos:43660..43662);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_02475;product=tRNA-Arg JAXGFV010000003.1 tRNAscan-SE exon 43626 43699 . + . ID=exon-SNF32_02475-1;Parent=rna-SNF32_02475;anticodon=(pos:43660..43662);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_02475;product=tRNA-Arg JAXGFV010000003.1 Genbank gene 44170 44328 . - . ID=gene-SNF32_02480;Name=SNF32_02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02480 JAXGFV010000003.1 GeneMarkS-2+ CDS 44170 44328 . - 0 ID=cds-MDY4306705.1;Parent=gene-SNF32_02480;Dbxref=NCBI_GP:MDY4306705.1;Name=MDY4306705.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02480;product=hypothetical protein;protein_id=MDY4306705.1;transl_table=11 JAXGFV010000003.1 Genbank gene 44835 45074 . + . ID=gene-SNF32_02485;Name=SNF32_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02485 JAXGFV010000003.1 GeneMarkS-2+ CDS 44835 45074 . + 0 ID=cds-MDY4306706.1;Parent=gene-SNF32_02485;Dbxref=NCBI_GP:MDY4306706.1;Name=MDY4306706.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02485;product=hypothetical protein;protein_id=MDY4306706.1;transl_table=11 JAXGFV010000003.1 Genbank gene 45382 45837 . - . ID=gene-SNF32_02490;Name=SNF32_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02490 JAXGFV010000003.1 GeneMarkS-2+ CDS 45382 45837 . - 0 ID=cds-MDY4306707.1;Parent=gene-SNF32_02490;Dbxref=NCBI_GP:MDY4306707.1;Name=MDY4306707.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02490;product=TetR/AcrR family transcriptional regulator;protein_id=MDY4306707.1;transl_table=11 JAXGFV010000003.1 Genbank gene 46054 46593 . + . ID=gene-SNF32_02495;Name=SNF32_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02495 JAXGFV010000003.1 Protein Homology CDS 46054 46593 . + 0 ID=cds-MDY4306708.1;Parent=gene-SNF32_02495;Dbxref=NCBI_GP:MDY4306708.1;Name=MDY4306708.1;Ontology_term=GO:0008080,GO:0016747;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF012792.3;locus_tag=SNF32_02495;product=GNAT family N-acetyltransferase;protein_id=MDY4306708.1;transl_table=11 JAXGFV010000003.1 Genbank gene 46866 47225 . + . ID=gene-SNF32_02500;Name=SNF32_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02500 JAXGFV010000003.1 Protein Homology CDS 46866 47225 . + 0 ID=cds-MDY4306709.1;Parent=gene-SNF32_02500;Dbxref=NCBI_GP:MDY4306709.1;Name=MDY4306709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736017.1;locus_tag=SNF32_02500;product=DUF1304 domain-containing protein;protein_id=MDY4306709.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 47373 48979 . + . ID=gene-SNF32_02505;Name=SNF32_02505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02505;pseudo=true JAXGFV010000003.1 Protein Homology CDS 47373 48979 . + 0 ID=cds-SNF32_02505;Parent=gene-SNF32_02505;Note=frameshifted;Ontology_term=GO:0015103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic anion transmembrane transporter activity|0015103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002343048.1;locus_tag=SNF32_02505;product=SulP family inorganic anion transporter;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 49061 49434 . + . ID=gene-SNF32_02510;Name=SNF32_02510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02510;pseudo=true JAXGFV010000003.1 Protein Homology CDS 49061 49434 . + 0 ID=cds-SNF32_02510;Parent=gene-SNF32_02510;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736015.1;locus_tag=SNF32_02510;product=MerR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 49468 50145 . - . ID=gene-SNF32_02515;Name=SNF32_02515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02515;pseudo=true JAXGFV010000003.1 Protein Homology CDS 49468 50145 . - 0 ID=cds-SNF32_02515;Parent=gene-SNF32_02515;Note=frameshifted;Ontology_term=GO:0006281,GO:0004844,GO:0046872,GO:0051539;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010779978.1;locus_tag=SNF32_02515;product=uracil-DNA glycosylase;pseudo=true;transl_table=11 JAXGFV010000003.1 cmsearch sequence_feature 50273 50352 . + . ID=id-JAXGFV010000003.1:50273..50352;Dbxref=RFAM:RF00559;Note=ribosomal protein L21 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.4 JAXGFV010000003.1 Genbank gene 50373 50681 . + . ID=gene-SNF32_02520;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=SNF32_02520 JAXGFV010000003.1 Protein Homology CDS 50373 50681 . + 0 ID=cds-MDY4306710.1;Parent=gene-SNF32_02520;Dbxref=NCBI_GP:MDY4306710.1;Name=MDY4306710.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002355866.1;locus_tag=SNF32_02520;product=50S ribosomal protein L21;protein_id=MDY4306710.1;transl_table=11 JAXGFV010000003.1 Genbank gene 50710 51054 . + . ID=gene-SNF32_02525;Name=SNF32_02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02525 JAXGFV010000003.1 Protein Homology CDS 50710 51054 . + 0 ID=cds-MDY4306711.1;Parent=gene-SNF32_02525;Dbxref=NCBI_GP:MDY4306711.1;Name=MDY4306711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002289451.1;locus_tag=SNF32_02525;product=ribosomal-processing cysteine protease Prp;protein_id=MDY4306711.1;transl_table=11 JAXGFV010000003.1 Genbank gene 51067 51360 . + . ID=gene-SNF32_02530;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=SNF32_02530 JAXGFV010000003.1 Protein Homology CDS 51067 51360 . + 0 ID=cds-MDY4306712.1;Parent=gene-SNF32_02530;Dbxref=NCBI_GP:MDY4306712.1;Name=MDY4306712.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002289452.1;locus_tag=SNF32_02530;product=50S ribosomal protein L27;protein_id=MDY4306712.1;transl_table=11 JAXGFV010000003.1 Genbank gene 51738 52037 . + . ID=gene-SNF32_02535;Name=SNF32_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02535 JAXGFV010000003.1 GeneMarkS-2+ CDS 51738 52037 . + 0 ID=cds-MDY4306713.1;Parent=gene-SNF32_02535;Dbxref=NCBI_GP:MDY4306713.1;Name=MDY4306713.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02535;product=hypothetical protein;protein_id=MDY4306713.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 52082 52621 . + . ID=gene-SNF32_02540;Name=SNF32_02540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02540;pseudo=true JAXGFV010000003.1 Protein Homology CDS 52082 52621 . + 0 ID=cds-SNF32_02540;Parent=gene-SNF32_02540;Note=internal stop;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012385.3;locus_tag=SNF32_02540;product=sigma 54-interacting transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 52630 54117 . + . ID=gene-SNF32_02545;Name=SNF32_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02545 JAXGFV010000003.1 Protein Homology CDS 52630 54117 . + 0 ID=cds-MDY4306714.1;Parent=gene-SNF32_02545;Dbxref=NCBI_GP:MDY4306714.1;Name=MDY4306714.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF015567.3;locus_tag=SNF32_02545;product=PRD domain-containing protein;protein_id=MDY4306714.1;transl_table=11 JAXGFV010000003.1 Genbank gene 54084 54587 . + . ID=gene-SNF32_02550;Name=SNF32_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02550 JAXGFV010000003.1 Protein Homology CDS 54084 54587 . + 0 ID=cds-MDY4306715.1;Parent=gene-SNF32_02550;Dbxref=NCBI_GP:MDY4306715.1;Name=MDY4306715.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF013070.3;locus_tag=SNF32_02550;product=PRD domain-containing protein;protein_id=MDY4306715.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 54750 55239 . + . ID=gene-SNF32_02555;Name=SNF32_02555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02555;pseudo=true JAXGFV010000003.1 Protein Homology CDS 54750 55239 . + 0 ID=cds-SNF32_02555;Parent=gene-SNF32_02555;Note=frameshifted;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724015.1;locus_tag=SNF32_02555;product=mannose/fructose/sorbose PTS transporter subunit IIB;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 55340 56295 . + . ID=gene-SNF32_02560;Name=SNF32_02560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02560;pseudo=true JAXGFV010000003.1 Protein Homology CDS 55340 56295 . + 0 ID=cds-SNF32_02560;Parent=gene-SNF32_02560;Note=frameshifted;Ontology_term=GO:0008643,GO:0016773;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003690906.1;locus_tag=SNF32_02560;product=mannose/fructose/sorbose PTS transporter subunit IIA;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 56341 57147 . + . ID=gene-SNF32_02565;Name=SNF32_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02565 JAXGFV010000003.1 Protein Homology CDS 56341 57147 . + 0 ID=cds-MDY4306716.1;Parent=gene-SNF32_02565;Dbxref=NCBI_GP:MDY4306716.1;Name=MDY4306716.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736007.1;locus_tag=SNF32_02565;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=MDY4306716.1;transl_table=11 JAXGFV010000003.1 Genbank gene 57240 58076 . + . ID=gene-SNF32_02570;Name=SNF32_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02570 JAXGFV010000003.1 Protein Homology CDS 57240 58076 . + 0 ID=cds-MDY4306717.1;Parent=gene-SNF32_02570;Dbxref=NCBI_GP:MDY4306717.1;Name=MDY4306717.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF015570.3;locus_tag=SNF32_02570;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=MDY4306717.1;transl_table=11 JAXGFV010000003.1 Genbank gene 58390 58764 . + . ID=gene-SNF32_02575;Name=SNF32_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02575 JAXGFV010000003.1 Protein Homology CDS 58390 58764 . + 0 ID=cds-MDY4306718.1;Parent=gene-SNF32_02575;Dbxref=NCBI_GP:MDY4306718.1;Name=MDY4306718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002291894.1;locus_tag=SNF32_02575;product=DUF956 family protein;protein_id=MDY4306718.1;transl_table=11 JAXGFV010000003.1 Genbank gene 58842 59087 . + . ID=gene-SNF32_02580;Name=SNF32_02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02580 JAXGFV010000003.1 Protein Homology CDS 58842 59087 . + 0 ID=cds-MDY4306719.1;Parent=gene-SNF32_02580;Dbxref=NCBI_GP:MDY4306719.1;Name=MDY4306719.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736004.1;locus_tag=SNF32_02580;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=MDY4306719.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 59271 59559 . + . ID=gene-SNF32_02585;Name=SNF32_02585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02585;pseudo=true JAXGFV010000003.1 Protein Homology CDS 59271 59559 . + 0 ID=cds-SNF32_02585;Parent=gene-SNF32_02585;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF013486.3;locus_tag=SNF32_02585;product=aminopeptidase P family N-terminal domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 59695 60300 . + . ID=gene-SNF32_02590;Name=SNF32_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02590 JAXGFV010000003.1 Protein Homology CDS 59695 60300 . + 0 ID=cds-MDY4306720.1;Parent=gene-SNF32_02590;Dbxref=NCBI_GP:MDY4306720.1;Name=MDY4306720.1;Ontology_term=GO:0006508,GO:0004177,GO:0016787,GO:0046872;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012766.3;locus_tag=SNF32_02590;product=M24 family metallopeptidase;protein_id=MDY4306720.1;transl_table=11 JAXGFV010000003.1 Genbank gene 60504 60938 . + . ID=gene-SNF32_02595;Name=SNF32_02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02595 JAXGFV010000003.1 Protein Homology CDS 60504 60938 . + 0 ID=cds-MDY4306721.1;Parent=gene-SNF32_02595;Dbxref=NCBI_GP:MDY4306721.1;Name=MDY4306721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016624160.1;locus_tag=SNF32_02595;product=Asp23/Gls24 family envelope stress response protein;protein_id=MDY4306721.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 60931 61379 . + . ID=gene-SNF32_02600;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=pseudogene;locus_tag=SNF32_02600;pseudo=true JAXGFV010000003.1 Protein Homology CDS 60931 61379 . + 0 ID=cds-SNF32_02600;Parent=gene-SNF32_02600;Note=frameshifted;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusB;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010751503.1;locus_tag=SNF32_02600;product=transcription antitermination factor NusB;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 61473 62324 . + . ID=gene-SNF32_02605;Name=SNF32_02605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02605;pseudo=true JAXGFV010000003.1 Protein Homology CDS 61473 62324 . + 0 ID=cds-SNF32_02605;Parent=gene-SNF32_02605;Note=frameshifted;Ontology_term=GO:0004488;gbkey=CDS;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723635.1;locus_tag=SNF32_02605;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 62321 63660 . + . ID=gene-SNF32_02610;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=pseudogene;locus_tag=SNF32_02610;pseudo=true JAXGFV010000003.1 Protein Homology CDS 62321 63660 . + 0 ID=cds-SNF32_02610;Parent=gene-SNF32_02610;Note=frameshifted;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735999.1;locus_tag=SNF32_02610;product=exodeoxyribonuclease VII large subunit;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 63662 63888 . + . ID=gene-SNF32_02615;Name=SNF32_02615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02615;pseudo=true JAXGFV010000003.1 Protein Homology CDS 63662 63888 . + 0 ID=cds-SNF32_02615;Parent=gene-SNF32_02615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735998.1;locus_tag=SNF32_02615;product=exodeoxyribonuclease VII small subunit;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 63885 64772 . + . ID=gene-SNF32_02620;Name=SNF32_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02620 JAXGFV010000003.1 Protein Homology CDS 63885 64772 . + 0 ID=cds-MDY4306722.1;Parent=gene-SNF32_02620;Dbxref=NCBI_GP:MDY4306722.1;Name=MDY4306722.1;Ontology_term=GO:0008299,GO:0004337;gbkey=CDS;go_function=geranyltranstransferase activity|0004337||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016628680.1;locus_tag=SNF32_02620;product=farnesyl diphosphate synthase;protein_id=MDY4306722.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 64781 65599 . + . ID=gene-SNF32_02625;Name=SNF32_02625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02625;pseudo=true JAXGFV010000003.1 Protein Homology CDS 64781 65599 . + 0 ID=cds-SNF32_02625;Parent=gene-SNF32_02625;Note=frameshifted;Ontology_term=GO:0032259,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016620449.1;locus_tag=SNF32_02625;product=TlyA family RNA methyltransferase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 65691 66144 . + . ID=gene-SNF32_02630;Name=SNF32_02630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02630;pseudo=true JAXGFV010000003.1 Protein Homology CDS 65691 66144 . + 0 ID=cds-SNF32_02630;Parent=gene-SNF32_02630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002291879.1;locus_tag=SNF32_02630;product=arginine repressor;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 66162 66785 . + . ID=gene-SNF32_02635;Name=SNF32_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02635 JAXGFV010000003.1 Protein Homology CDS 66162 66785 . + 0 ID=cds-MDY4306723.1;Parent=gene-SNF32_02635;Dbxref=NCBI_GP:MDY4306723.1;Name=MDY4306723.1;Ontology_term=GO:0006302,GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;go_process=double-strand break repair|0006302||IEA;inference=COORDINATES: protein motif:HMM:NF024867.3;locus_tag=SNF32_02635;product=AAA family ATPase;protein_id=MDY4306723.1;transl_table=11 JAXGFV010000003.1 Genbank gene 66906 67841 . + . ID=gene-SNF32_02640;Name=SNF32_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02640 JAXGFV010000003.1 GeneMarkS-2+ CDS 66906 67841 . + 0 ID=cds-MDY4306724.1;Parent=gene-SNF32_02640;Dbxref=NCBI_GP:MDY4306724.1;Name=MDY4306724.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02640;product=hypothetical protein;protein_id=MDY4306724.1;transl_table=11 JAXGFV010000003.1 Genbank gene 68683 69264 . + . ID=gene-SNF32_02645;Name=SNF32_02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02645 JAXGFV010000003.1 GeneMarkS-2+ CDS 68683 69264 . + 0 ID=cds-MDY4306725.1;Parent=gene-SNF32_02645;Dbxref=NCBI_GP:MDY4306725.1;Name=MDY4306725.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02645;product=hypothetical protein;protein_id=MDY4306725.1;transl_table=11 JAXGFV010000003.1 Genbank gene 69333 69938 . + . ID=gene-SNF32_02650;Name=SNF32_02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02650 JAXGFV010000003.1 GeneMarkS-2+ CDS 69333 69938 . + 0 ID=cds-MDY4306726.1;Parent=gene-SNF32_02650;Dbxref=NCBI_GP:MDY4306726.1;Name=MDY4306726.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02650;product=hypothetical protein;protein_id=MDY4306726.1;transl_table=11 JAXGFV010000003.1 Genbank gene 69935 70198 . + . ID=gene-SNF32_02655;Name=SNF32_02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02655 JAXGFV010000003.1 GeneMarkS-2+ CDS 69935 70198 . + 0 ID=cds-MDY4306727.1;Parent=gene-SNF32_02655;Dbxref=NCBI_GP:MDY4306727.1;Name=MDY4306727.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02655;product=hypothetical protein;protein_id=MDY4306727.1;transl_table=11 JAXGFV010000003.1 Genbank gene 70598 70864 . + . ID=gene-SNF32_02660;Name=SNF32_02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02660 JAXGFV010000003.1 GeneMarkS-2+ CDS 70598 70864 . + 0 ID=cds-MDY4306728.1;Parent=gene-SNF32_02660;Dbxref=NCBI_GP:MDY4306728.1;Name=MDY4306728.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02660;product=hypothetical protein;protein_id=MDY4306728.1;transl_table=11 JAXGFV010000003.1 Genbank gene 71562 71717 . + . ID=gene-SNF32_02665;Name=SNF32_02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02665 JAXGFV010000003.1 GeneMarkS-2+ CDS 71562 71717 . + 0 ID=cds-MDY4306729.1;Parent=gene-SNF32_02665;Dbxref=NCBI_GP:MDY4306729.1;Name=MDY4306729.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02665;product=hypothetical protein;protein_id=MDY4306729.1;transl_table=11 JAXGFV010000003.1 Genbank gene 71839 72192 . + . ID=gene-SNF32_02670;Name=SNF32_02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02670 JAXGFV010000003.1 GeneMarkS-2+ CDS 71839 72192 . + 0 ID=cds-MDY4306730.1;Parent=gene-SNF32_02670;Dbxref=NCBI_GP:MDY4306730.1;Name=MDY4306730.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02670;product=hypothetical protein;protein_id=MDY4306730.1;transl_table=11 JAXGFV010000003.1 Genbank gene 72179 72469 . + . ID=gene-SNF32_02675;Name=SNF32_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02675 JAXGFV010000003.1 GeneMarkS-2+ CDS 72179 72469 . + 0 ID=cds-MDY4306731.1;Parent=gene-SNF32_02675;Dbxref=NCBI_GP:MDY4306731.1;Name=MDY4306731.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02675;product=hypothetical protein;protein_id=MDY4306731.1;transl_table=11 JAXGFV010000003.1 Genbank gene 72906 73040 . - . ID=gene-SNF32_02680;Name=SNF32_02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02680 JAXGFV010000003.1 Protein Homology CDS 72906 73040 . - 0 ID=cds-MDY4306732.1;Parent=gene-SNF32_02680;Dbxref=NCBI_GP:MDY4306732.1;Name=MDY4306732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002291876.1;locus_tag=SNF32_02680;product=DUF4044 domain-containing protein;protein_id=MDY4306732.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 73077 74046 . - . ID=gene-SNF32_02685;Name=SNF32_02685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02685;pseudo=true JAXGFV010000003.1 Protein Homology CDS 73077 74046 . - 0 ID=cds-SNF32_02685;Parent=gene-SNF32_02685;Note=frameshifted;Ontology_term=GO:0030001,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002301370.1;locus_tag=SNF32_02685;product=magnesium transporter CorA family protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 74255 74566 . + . ID=gene-SNF32_02690;Name=SNF32_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02690 JAXGFV010000003.1 Protein Homology CDS 74255 74566 . + 0 ID=cds-MDY4306733.1;Parent=gene-SNF32_02690;Dbxref=NCBI_GP:MDY4306733.1;Name=MDY4306733.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023305.3;locus_tag=SNF32_02690;product=DUF3397 family protein;protein_id=MDY4306733.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 74789 75219 . + . ID=gene-SNF32_02695;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=pseudogene;locus_tag=SNF32_02695;pseudo=true JAXGFV010000003.1 Protein Homology CDS 74789 75219 . + 0 ID=cds-SNF32_02695;Parent=gene-SNF32_02695;Note=frameshifted;Ontology_term=GO:0051302,GO:0043565;gbkey=CDS;gene=mraZ;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of cell division|0051302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005881057.1;locus_tag=SNF32_02695;product=division/cell wall cluster transcriptional repressor MraZ;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 75241 76178 . + . ID=gene-SNF32_02700;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=pseudogene;locus_tag=SNF32_02700;pseudo=true JAXGFV010000003.1 Protein Homology CDS 75241 76178 . + 0 ID=cds-SNF32_02700;Parent=gene-SNF32_02700;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002348714.1;locus_tag=SNF32_02700;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 76203 76598 . + . ID=gene-SNF32_02705;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=pseudogene;locus_tag=SNF32_02705;pseudo=true JAXGFV010000003.1 Protein Homology CDS 76203 76598 . + 0 ID=cds-SNF32_02705;Parent=gene-SNF32_02705;Note=frameshifted;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002291866.1;locus_tag=SNF32_02705;product=cell division protein FtsL;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 76599 78786 . + . ID=gene-SNF32_02710;Name=SNF32_02710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02710;pseudo=true JAXGFV010000003.1 Protein Homology CDS 76599 78786 . + 0 ID=cds-SNF32_02710;Parent=gene-SNF32_02710;Note=frameshifted;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002326487.1;locus_tag=SNF32_02710;product=penicillin-binding transpeptidase domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 78803 79761 . + . ID=gene-SNF32_02715;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=pseudogene;locus_tag=SNF32_02715;pseudo=true JAXGFV010000003.1 Protein Homology CDS 78803 79761 . + 0 ID=cds-SNF32_02715;Parent=gene-SNF32_02715;Note=frameshifted;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002341238.1;locus_tag=SNF32_02715;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 79755 81141 . + . ID=gene-SNF32_02720;Name=murD;gbkey=Gene;gene=murD;gene_biotype=pseudogene;locus_tag=SNF32_02720;pseudo=true JAXGFV010000003.1 Protein Homology CDS 79755 81141 . + 0 ID=cds-SNF32_02720;Parent=gene-SNF32_02720;Note=frameshifted;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010740485.1;locus_tag=SNF32_02720;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 81160 82246 . + . ID=gene-SNF32_02725;Name=murG;gbkey=Gene;gene=murG;gene_biotype=pseudogene;locus_tag=SNF32_02725;pseudo=true JAXGFV010000003.1 Protein Homology CDS 81160 82246 . + 0 ID=cds-SNF32_02725;Parent=gene-SNF32_02725;Note=frameshifted;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010738199.1;locus_tag=SNF32_02725;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 82744 82974 . + . ID=gene-SNF32_02730;Name=SNF32_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02730 JAXGFV010000003.1 GeneMarkS-2+ CDS 82744 82974 . + 0 ID=cds-MDY4306734.1;Parent=gene-SNF32_02730;Dbxref=NCBI_GP:MDY4306734.1;Name=MDY4306734.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02730;product=hypothetical protein;protein_id=MDY4306734.1;transl_table=11 JAXGFV010000003.1 Genbank gene 82998 83432 . + . ID=gene-SNF32_02735;Name=SNF32_02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02735 JAXGFV010000003.1 Protein Homology CDS 82998 83432 . + 0 ID=cds-MDY4306735.1;Parent=gene-SNF32_02735;Dbxref=NCBI_GP:MDY4306735.1;Name=MDY4306735.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015739.3;locus_tag=SNF32_02735;product=hypothetical protein;protein_id=MDY4306735.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 83601 84911 . + . ID=gene-SNF32_02740;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=pseudogene;locus_tag=SNF32_02740;pseudo=true JAXGFV010000003.1 Protein Homology CDS 83601 84911 . + 0 ID=cds-SNF32_02740;Parent=gene-SNF32_02740;Note=frameshifted;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002347904.1;locus_tag=SNF32_02740;product=cell division protein FtsA;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 84932 86201 . + . ID=gene-SNF32_02745;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=pseudogene;locus_tag=SNF32_02745;pseudo=true JAXGFV010000003.1 Protein Homology CDS 84932 86201 . + 0 ID=cds-SNF32_02745;Parent=gene-SNF32_02745;Note=frameshifted;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002346312.1;locus_tag=SNF32_02745;product=cell division protein FtsZ;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 86191 86875 . + . ID=gene-SNF32_02750;Name=SNF32_02750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02750;pseudo=true JAXGFV010000003.1 Protein Homology CDS 86191 86875 . + 0 ID=cds-SNF32_02750;Parent=gene-SNF32_02750;Note=frameshifted;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177076.1;locus_tag=SNF32_02750;product=YggS family pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 86875 87470 . + . ID=gene-SNF32_02755;Name=sepF;gbkey=Gene;gene=sepF;gene_biotype=pseudogene;locus_tag=SNF32_02755;pseudo=true JAXGFV010000003.1 Protein Homology CDS 86875 87470 . + 0 ID=cds-SNF32_02755;Parent=gene-SNF32_02755;Note=frameshifted%3B internal stop;Ontology_term=GO:0090529;gbkey=CDS;gene=sepF;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002326044.1;locus_tag=SNF32_02755;product=cell division protein SepF;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 87501 87770 . + . ID=gene-SNF32_02760;Name=SNF32_02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02760 JAXGFV010000003.1 Protein Homology CDS 87501 87770 . + 0 ID=cds-MDY4306736.1;Parent=gene-SNF32_02760;Dbxref=NCBI_GP:MDY4306736.1;Name=MDY4306736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723315.1;locus_tag=SNF32_02760;product=YggT family protein;protein_id=MDY4306736.1;transl_table=11 JAXGFV010000003.1 Genbank gene 87804 88586 . + . ID=gene-SNF32_02765;Name=SNF32_02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02765 JAXGFV010000003.1 Protein Homology CDS 87804 88586 . + 0 ID=cds-MDY4306737.1;Parent=gene-SNF32_02765;Dbxref=NCBI_GP:MDY4306737.1;Name=MDY4306737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177078.1;locus_tag=SNF32_02765;product=RNA-binding protein;protein_id=MDY4306737.1;transl_table=11 JAXGFV010000003.1 Genbank gene 88607 89314 . + . ID=gene-SNF32_02770;Name=SNF32_02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02770 JAXGFV010000003.1 Protein Homology CDS 88607 89314 . + 0 ID=cds-MDY4306738.1;Parent=gene-SNF32_02770;Dbxref=NCBI_GP:MDY4306738.1;Name=MDY4306738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629467.1;locus_tag=SNF32_02770;product=DivIVA domain-containing protein;protein_id=MDY4306738.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 89558 92349 . + . ID=gene-SNF32_02775;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=pseudogene;locus_tag=SNF32_02775;pseudo=true JAXGFV010000003.1 Protein Homology CDS 89558 92349 . + 0 ID=cds-SNF32_02775;Parent=gene-SNF32_02775;Note=frameshifted;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005881028.1;locus_tag=SNF32_02775;product=isoleucine--tRNA ligase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 92441 93930 . - . ID=gene-SNF32_02780;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=pseudogene;locus_tag=SNF32_02780;pseudo=true JAXGFV010000003.1 Protein Homology CDS 92441 93930 . - 0 ID=cds-SNF32_02780;Parent=gene-SNF32_02780;Note=frameshifted;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016615585.1;locus_tag=SNF32_02780;product=glucose-6-phosphate dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 93974 94619 . - . ID=gene-SNF32_02785;Name=SNF32_02785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02785;pseudo=true JAXGFV010000003.1 Protein Homology CDS 93974 94619 . - 0 ID=cds-SNF32_02785;Parent=gene-SNF32_02785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002310285.1;locus_tag=SNF32_02785;product=metal-dependent transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 94934 95239 . - . ID=gene-SNF32_02790;Name=SNF32_02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02790 JAXGFV010000003.1 Protein Homology CDS 94934 95239 . - 0 ID=cds-MDY4306739.1;Parent=gene-SNF32_02790;Dbxref=NCBI_GP:MDY4306739.1;Name=MDY4306739.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027436.3;locus_tag=SNF32_02790;product=DUF4828 domain-containing protein;protein_id=MDY4306739.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 95509 96235 . + . ID=gene-SNF32_02795;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=pseudogene;locus_tag=SNF32_02795;pseudo=true JAXGFV010000003.1 Protein Homology CDS 95509 96235 . + 0 ID=cds-SNF32_02795;Parent=gene-SNF32_02795;Note=frameshifted;Ontology_term=GO:0000023,GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;go_process=maltose metabolic process|0000023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016613175.1;locus_tag=SNF32_02795;product=DNA/RNA nuclease SfsA;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 96251 97263 . + . ID=gene-SNF32_02800;Name=SNF32_02800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02800;pseudo=true JAXGFV010000003.1 Protein Homology CDS 96251 97263 . + 0 ID=cds-SNF32_02800;Parent=gene-SNF32_02800;Note=frameshifted;Ontology_term=GO:0016491,GO:0016651;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735966.1;locus_tag=SNF32_02800;product=Gfo/Idh/MocA family oxidoreductase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 97263 97767 . + . ID=gene-SNF32_02805;Name=SNF32_02805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02805;pseudo=true JAXGFV010000003.1 Protein Homology CDS 97263 97767 . + 0 ID=cds-SNF32_02805;Parent=gene-SNF32_02805;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012492.3;locus_tag=SNF32_02805;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 97837 98001 . + . ID=gene-SNF32_02810;Name=SNF32_02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02810 JAXGFV010000003.1 GeneMarkS-2+ CDS 97837 98001 . + 0 ID=cds-MDY4306740.1;Parent=gene-SNF32_02810;Dbxref=NCBI_GP:MDY4306740.1;Name=MDY4306740.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02810;product=hypothetical protein;protein_id=MDY4306740.1;transl_table=11 JAXGFV010000003.1 Genbank gene 98027 98425 . + . ID=gene-SNF32_02815;Name=SNF32_02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02815 JAXGFV010000003.1 Protein Homology CDS 98027 98425 . + 0 ID=cds-MDY4306741.1;Parent=gene-SNF32_02815;Dbxref=NCBI_GP:MDY4306741.1;Name=MDY4306741.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012493.3;locus_tag=SNF32_02815;product=C-terminal helicase domain-containing protein;protein_id=MDY4306741.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 98597 101294 . + . ID=gene-SNF32_02820;Name=SNF32_02820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02820;pseudo=true JAXGFV010000003.1 Protein Homology CDS 98597 101294 . + 0 ID=cds-SNF32_02820;Parent=gene-SNF32_02820;Note=frameshifted%3B internal stop;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010749333.1;locus_tag=SNF32_02820;product=sigma 54-interacting transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 101458 101756 . + . ID=gene-SNF32_02825;Name=SNF32_02825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02825;pseudo=true JAXGFV010000003.1 Protein Homology CDS 101458 101756 . + 0 ID=cds-SNF32_02825;Parent=gene-SNF32_02825;Note=frameshifted;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016249890.1;locus_tag=SNF32_02825;product=PTS sugar transporter subunit IIB;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 101783 102101 . + . ID=gene-SNF32_02830;Name=SNF32_02830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02830;pseudo=true JAXGFV010000003.1 Protein Homology CDS 101783 102101 . + 0 ID=cds-SNF32_02830;Parent=gene-SNF32_02830;Note=frameshifted%3B internal stop;Ontology_term=GO:0009401,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010719762.1;locus_tag=SNF32_02830;product=PTS lactose/cellobiose transporter subunit IIA;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 102210 103669 . + . ID=gene-SNF32_02835;Name=SNF32_02835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02835;pseudo=true JAXGFV010000003.1 Protein Homology CDS 102210 103669 . + 0 ID=cds-SNF32_02835;Parent=gene-SNF32_02835;Note=frameshifted;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002343028.1;locus_tag=SNF32_02835;product=PTS transporter subunit EIIC;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 103777 103998 . + . ID=gene-SNF32_02840;Name=SNF32_02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02840 JAXGFV010000003.1 Protein Homology CDS 103777 103998 . + 0 ID=cds-MDY4306742.1;Parent=gene-SNF32_02840;Dbxref=NCBI_GP:MDY4306742.1;Name=MDY4306742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002297972.1;locus_tag=SNF32_02840;product=hypothetical protein;protein_id=MDY4306742.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 104022 104202 . + . ID=gene-SNF32_02845;Name=SNF32_02845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02845;pseudo=true JAXGFV010000003.1 Protein Homology CDS 104022 104202 . + 0 ID=cds-SNF32_02845;Parent=gene-SNF32_02845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002320920.1;locus_tag=SNF32_02845;product=DUF3188 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 104202 104615 . + . ID=gene-SNF32_02850;Name=SNF32_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02850 JAXGFV010000003.1 Protein Homology CDS 104202 104615 . + 0 ID=cds-MDY4306743.1;Parent=gene-SNF32_02850;Dbxref=NCBI_GP:MDY4306743.1;Name=MDY4306743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002315398.1;locus_tag=SNF32_02850;product=DUF3284 domain-containing protein;protein_id=MDY4306743.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 104874 106048 . + . ID=gene-SNF32_02855;Name=SNF32_02855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02855;pseudo=true JAXGFV010000003.1 Protein Homology CDS 104874 106048 . + 0 ID=cds-SNF32_02855;Parent=gene-SNF32_02855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016631999.1;locus_tag=SNF32_02855;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 106083 106340 . + . ID=gene-SNF32_02860;Name=SNF32_02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02860 JAXGFV010000003.1 Protein Homology CDS 106083 106340 . + 0 ID=cds-MDY4306744.1;Parent=gene-SNF32_02860;Dbxref=NCBI_GP:MDY4306744.1;Name=MDY4306744.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024086.3;locus_tag=SNF32_02860;product=zinc ribbon domain-containing protein;protein_id=MDY4306744.1;transl_table=11 JAXGFV010000003.1 Genbank gene 106650 106723 . - . ID=gene-SNF32_02865;Name=SNF32_02865;gbkey=Gene;gene_biotype=tRNA;locus_tag=SNF32_02865 JAXGFV010000003.1 tRNAscan-SE tRNA 106650 106723 . - . ID=rna-SNF32_02865;Parent=gene-SNF32_02865;anticodon=(pos:complement(106687..106689));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_02865;product=tRNA-Arg JAXGFV010000003.1 tRNAscan-SE exon 106650 106723 . - . ID=exon-SNF32_02865-1;Parent=rna-SNF32_02865;anticodon=(pos:complement(106687..106689));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_02865;product=tRNA-Arg JAXGFV010000003.1 Genbank gene 106845 107009 . + . ID=gene-SNF32_02870;Name=SNF32_02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02870 JAXGFV010000003.1 Protein Homology CDS 106845 107009 . + 0 ID=cds-MDY4306745.1;Parent=gene-SNF32_02870;Dbxref=NCBI_GP:MDY4306745.1;Name=MDY4306745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002286676.1;locus_tag=SNF32_02870;product=hypothetical protein;protein_id=MDY4306745.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 107067 108251 . - . ID=gene-SNF32_02875;Name=SNF32_02875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02875;pseudo=true JAXGFV010000003.1 Protein Homology CDS 107067 108251 . - 0 ID=cds-SNF32_02875;Parent=gene-SNF32_02875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002314209.1;locus_tag=SNF32_02875;product=aminopeptidase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 108497 109120 . + . ID=gene-SNF32_02880;Name=SNF32_02880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02880;pseudo=true JAXGFV010000003.1 Protein Homology CDS 108497 109120 . + 0 ID=cds-SNF32_02880;Parent=gene-SNF32_02880;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002321541.1;locus_tag=SNF32_02880;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 109234 109677 . - . ID=gene-SNF32_02885;Name=SNF32_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02885 JAXGFV010000003.1 Protein Homology CDS 109234 109677 . - 0 ID=cds-MDY4306746.1;Parent=gene-SNF32_02885;Dbxref=NCBI_GP:MDY4306746.1;Name=MDY4306746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735952.1;locus_tag=SNF32_02885;product=flavodoxin;protein_id=MDY4306746.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 109840 110601 . + . ID=gene-SNF32_02890;Name=map;gbkey=Gene;gene=map;gene_biotype=pseudogene;locus_tag=SNF32_02890;pseudo=true JAXGFV010000003.1 Protein Homology CDS 109840 110601 . + 0 ID=cds-SNF32_02890;Parent=gene-SNF32_02890;Note=frameshifted;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008377375.1;locus_tag=SNF32_02890;product=type I methionyl aminopeptidase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 110930 111876 . + . ID=gene-SNF32_02895;Name=SNF32_02895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02895;pseudo=true JAXGFV010000003.1 Protein Homology CDS 110930 111876 . + 0 ID=cds-SNF32_02895;Parent=gene-SNF32_02895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010751451.1;locus_tag=SNF32_02895;product=YihY/virulence factor BrkB family protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 112026 112256 . + . ID=gene-SNF32_02900;Name=SNF32_02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02900 JAXGFV010000003.1 GeneMarkS-2+ CDS 112026 112256 . + 0 ID=cds-MDY4306747.1;Parent=gene-SNF32_02900;Dbxref=NCBI_GP:MDY4306747.1;Name=MDY4306747.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02900;product=hypothetical protein;protein_id=MDY4306747.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 112393 112785 . + . ID=gene-SNF32_02905;Name=SNF32_02905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02905;pseudo=true JAXGFV010000003.1 Protein Homology CDS 112393 112785 . + 0 ID=cds-SNF32_02905;Parent=gene-SNF32_02905;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013146.3;locus_tag=SNF32_02905;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 112761 112988 . + . ID=gene-SNF32_02910;Name=SNF32_02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02910 JAXGFV010000003.1 GeneMarkS-2+ CDS 112761 112988 . + 0 ID=cds-MDY4306748.1;Parent=gene-SNF32_02910;Dbxref=NCBI_GP:MDY4306748.1;Name=MDY4306748.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_02910;product=hypothetical protein;protein_id=MDY4306748.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 113073 113847 . + . ID=gene-SNF32_02915;Name=SNF32_02915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02915;pseudo=true JAXGFV010000003.1 Protein Homology CDS 113073 113847 . + 0 ID=cds-SNF32_02915;Parent=gene-SNF32_02915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010764102.1;locus_tag=SNF32_02915;product=glycosyltransferase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 113847 114670 . + . ID=gene-SNF32_02920;Name=SNF32_02920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02920;pseudo=true JAXGFV010000003.1 Protein Homology CDS 113847 114670 . + 0 ID=cds-SNF32_02920;Parent=gene-SNF32_02920;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002377110.1;locus_tag=SNF32_02920;product=glycosyl transferase family 2;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 114675 115397 . + . ID=gene-SNF32_02925;Name=SNF32_02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02925 JAXGFV010000003.1 Protein Homology CDS 114675 115397 . + 0 ID=cds-MDY4306749.1;Parent=gene-SNF32_02925;Dbxref=NCBI_GP:MDY4306749.1;Name=MDY4306749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010738181.1;locus_tag=SNF32_02925;product=glycosyltransferase family 2 protein;protein_id=MDY4306749.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 115483 116348 . + . ID=gene-SNF32_02930;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=pseudogene;locus_tag=SNF32_02930;pseudo=true JAXGFV010000003.1 Protein Homology CDS 115483 116348 . + 0 ID=cds-SNF32_02930;Parent=gene-SNF32_02930;Note=frameshifted;Ontology_term=GO:0009243,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735945.1;locus_tag=SNF32_02930;product=glucose-1-phosphate thymidylyltransferase RfbA;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 116362 116934 . + . ID=gene-SNF32_02935;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=SNF32_02935 JAXGFV010000003.1 Protein Homology CDS 116362 116934 . + 0 ID=cds-MDY4306750.1;Parent=gene-SNF32_02935;Dbxref=NCBI_GP:MDY4306750.1;Name=MDY4306750.1;Ontology_term=GO:0009243,GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010771301.1;locus_tag=SNF32_02935;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=MDY4306750.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 116958 117985 . + . ID=gene-SNF32_02940;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=pseudogene;locus_tag=SNF32_02940;pseudo=true JAXGFV010000003.1 Protein Homology CDS 116958 117985 . + 0 ID=cds-SNF32_02940;Parent=gene-SNF32_02940;Note=frameshifted;Ontology_term=GO:0009243,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010719743.1;locus_tag=SNF32_02940;product=dTDP-glucose 4%2C6-dehydratase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 118230 119314 . - . ID=gene-SNF32_02945;Name=SNF32_02945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02945;pseudo=true JAXGFV010000003.1 Protein Homology CDS 118230 119314 . - 0 ID=cds-SNF32_02945;Parent=gene-SNF32_02945;Note=frameshifted;Ontology_term=GO:0016126,GO:0019287,GO:0004631;gbkey=CDS;go_function=phosphomevalonate kinase activity|0004631||IEA;go_process=sterol biosynthetic process|0016126||IEA,isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736574.1;locus_tag=SNF32_02945;product=phosphomevalonate kinase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 119327 120299 . - . ID=gene-SNF32_02950;Name=mvaD;gbkey=Gene;gene=mvaD;gene_biotype=pseudogene;locus_tag=SNF32_02950;pseudo=true JAXGFV010000003.1 Protein Homology CDS 119327 120299 . - 0 ID=cds-SNF32_02950;Parent=gene-SNF32_02950;Note=frameshifted;Ontology_term=GO:0019287,GO:0004163;gbkey=CDS;gene=mvaD;go_function=diphosphomevalonate decarboxylase activity|0004163||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002374283.1;locus_tag=SNF32_02950;product=diphosphomevalonate decarboxylase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 120292 121236 . - . ID=gene-SNF32_02955;Name=mvk;gbkey=Gene;gene=mvk;gene_biotype=pseudogene;locus_tag=SNF32_02955;pseudo=true JAXGFV010000003.1 Protein Homology CDS 120292 121236 . - 0 ID=cds-SNF32_02955;Parent=gene-SNF32_02955;Note=frameshifted;Ontology_term=GO:0016126,GO:0019287,GO:0004496;gbkey=CDS;gene=mvk;go_function=mevalonate kinase activity|0004496||IEA;go_process=sterol biosynthetic process|0016126||IEA,isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736572.1;locus_tag=SNF32_02955;product=mevalonate kinase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 121530 122184 . + . ID=gene-SNF32_02960;Name=SNF32_02960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02960;pseudo=true JAXGFV010000003.1 Protein Homology CDS 121530 122184 . + 0 ID=cds-SNF32_02960;Parent=gene-SNF32_02960;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002356607.1;locus_tag=SNF32_02960;product=deoxynucleoside kinase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 122316 123713 . - . ID=gene-SNF32_02965;Name=SNF32_02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02965 JAXGFV010000003.1 Protein Homology CDS 122316 123713 . - 0 ID=cds-MDY4306751.1;Parent=gene-SNF32_02965;Dbxref=NCBI_GP:MDY4306751.1;Name=MDY4306751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722405.1;locus_tag=SNF32_02965;product=lytic polysaccharide monooxygenase;protein_id=MDY4306751.1;transl_table=11 JAXGFV010000003.1 Genbank gene 124481 125887 . - . ID=gene-SNF32_02970;Name=SNF32_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_02970 JAXGFV010000003.1 Protein Homology CDS 124481 125887 . - 0 ID=cds-MDY4306752.1;Parent=gene-SNF32_02970;Dbxref=NCBI_GP:MDY4306752.1;Name=MDY4306752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722405.1;locus_tag=SNF32_02970;product=lytic polysaccharide monooxygenase;protein_id=MDY4306752.1;transl_table=11 JAXGFV010000003.1 cmsearch sequence_feature 126342 126471 . + . ID=id-JAXGFV010000003.1:126342..126471;Dbxref=RFAM:RF00558;Note=ribosomal protein L20 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.4 JAXGFV010000003.1 Genbank pseudogene 126514 127037 . + . ID=gene-SNF32_02975;Name=infC;gbkey=Gene;gene=infC;gene_biotype=pseudogene;locus_tag=SNF32_02975;pseudo=true JAXGFV010000003.1 Protein Homology CDS 126514 127037 . + 0 ID=cds-SNF32_02975;Parent=gene-SNF32_02975;Note=frameshifted;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010750600.1;locus_tag=SNF32_02975;product=translation initiation factor IF-3;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 127090 127308 . + . ID=gene-SNF32_02980;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=SNF32_02980 JAXGFV010000003.1 Protein Homology CDS 127090 127308 . + 0 ID=cds-MDY4306753.1;Parent=gene-SNF32_02980;Dbxref=NCBI_GP:MDY4306753.1;Name=MDY4306753.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002355798.1;locus_tag=SNF32_02980;product=50S ribosomal protein L35;protein_id=MDY4306753.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 127362 127720 . + . ID=gene-SNF32_02985;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=pseudogene;locus_tag=SNF32_02985;pseudo=true JAXGFV010000003.1 Protein Homology CDS 127362 127720 . + 0 ID=cds-SNF32_02985;Parent=gene-SNF32_02985;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723984.1;locus_tag=SNF32_02985;product=50S ribosomal protein L20;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 128071 129404 . + . ID=gene-SNF32_02990;Name=SNF32_02990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02990;pseudo=true JAXGFV010000003.1 Protein Homology CDS 128071 129404 . + 0 ID=cds-SNF32_02990;Parent=gene-SNF32_02990;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736546.1;locus_tag=SNF32_02990;product=citrate transporter;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 129439 131560 . + . ID=gene-SNF32_02995;Name=SNF32_02995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_02995;pseudo=true JAXGFV010000003.1 Protein Homology CDS 129439 131560 . + 0 ID=cds-SNF32_02995;Parent=gene-SNF32_02995;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177261.1;locus_tag=SNF32_02995;product=hydantoinase/oxoprolinase family protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 132251 132924 . - . ID=gene-SNF32_03000;Name=SNF32_03000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03000;pseudo=true JAXGFV010000003.1 Protein Homology CDS 132251 132924 . - 0 ID=cds-SNF32_03000;Parent=gene-SNF32_03000;Note=frameshifted;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736543.1;locus_tag=SNF32_03000;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 133359 133846 . - . ID=gene-SNF32_03005;Name=SNF32_03005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03005;pseudo=true JAXGFV010000003.1 Protein Homology CDS 133359 133846 . - 0 ID=cds-SNF32_03005;Parent=gene-SNF32_03005;Note=frameshifted;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736541.1;locus_tag=SNF32_03005;product=acyl-CoA thioesterase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 133830 134656 . - . ID=gene-SNF32_03010;Name=SNF32_03010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03010;pseudo=true JAXGFV010000003.1 Protein Homology CDS 133830 134656 . - 0 ID=cds-SNF32_03010;Parent=gene-SNF32_03010;Note=frameshifted;Ontology_term=GO:0052855;gbkey=CDS;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723406.1;locus_tag=SNF32_03010;product=NAD(P)H-hydrate dehydratase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 134797 136214 . + . ID=gene-SNF32_03015;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=pseudogene;locus_tag=SNF32_03015;pseudo=true JAXGFV010000003.1 Protein Homology CDS 134797 136214 . + 0 ID=cds-SNF32_03015;Parent=gene-SNF32_03015;Note=frameshifted;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;gene=pepV;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723407.1;locus_tag=SNF32_03015;product=dipeptidase PepV;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 136524 136646 . + . ID=gene-SNF32_03020;Name=SNF32_03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03020 JAXGFV010000003.1 GeneMarkS-2+ CDS 136524 136646 . + 0 ID=cds-MDY4306754.1;Parent=gene-SNF32_03020;Dbxref=NCBI_GP:MDY4306754.1;Name=MDY4306754.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03020;product=hypothetical protein;protein_id=MDY4306754.1;transl_table=11 JAXGFV010000003.1 Genbank gene 136661 136753 . + . ID=gene-SNF32_03025;Name=SNF32_03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03025 JAXGFV010000003.1 Protein Homology CDS 136661 136753 . + 0 ID=cds-MDY4306755.1;Parent=gene-SNF32_03025;Dbxref=NCBI_GP:MDY4306755.1;Name=MDY4306755.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012610.3;locus_tag=SNF32_03025;product=hypothetical protein;protein_id=MDY4306755.1;transl_table=11 JAXGFV010000003.1 Genbank gene 136750 137208 . + . ID=gene-SNF32_03030;Name=SNF32_03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03030 JAXGFV010000003.1 Protein Homology CDS 136750 137208 . + 0 ID=cds-MDY4306756.1;Parent=gene-SNF32_03030;Dbxref=NCBI_GP:MDY4306756.1;Name=MDY4306756.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: protein motif:HMM:NF019322.3;locus_tag=SNF32_03030;product=GntR family transcriptional regulator;protein_id=MDY4306756.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 137422 138725 . + . ID=gene-SNF32_03035;Name=SNF32_03035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03035;pseudo=true JAXGFV010000003.1 Protein Homology CDS 137422 138725 . + 0 ID=cds-SNF32_03035;Parent=gene-SNF32_03035;Note=frameshifted;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736537.1;locus_tag=SNF32_03035;product=PTS transporter subunit EIIC;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 138783 140136 . + . ID=gene-SNF32_03040;Name=SNF32_03040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03040;pseudo=true JAXGFV010000003.1 Protein Homology CDS 138783 140136 . + 0 ID=cds-SNF32_03040;Parent=gene-SNF32_03040;Note=frameshifted;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736536.1;locus_tag=SNF32_03040;product=glycoside hydrolase family 1 protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 140404 140598 . + . ID=gene-SNF32_03045;Name=SNF32_03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03045 JAXGFV010000003.1 Protein Homology CDS 140404 140598 . + 0 ID=cds-MDY4306757.1;Parent=gene-SNF32_03045;Dbxref=NCBI_GP:MDY4306757.1;Name=MDY4306757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736535.1;locus_tag=SNF32_03045;product=hypothetical protein;protein_id=MDY4306757.1;transl_table=11 JAXGFV010000003.1 Genbank gene 140718 140885 . + . ID=gene-SNF32_03050;Name=SNF32_03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03050 JAXGFV010000003.1 GeneMarkS-2+ CDS 140718 140885 . + 0 ID=cds-MDY4306758.1;Parent=gene-SNF32_03050;Dbxref=NCBI_GP:MDY4306758.1;Name=MDY4306758.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03050;product=hypothetical protein;protein_id=MDY4306758.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 141015 141393 . - . ID=gene-SNF32_03055;Name=SNF32_03055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03055;pseudo=true JAXGFV010000003.1 Protein Homology CDS 141015 141393 . - 0 ID=cds-SNF32_03055;Parent=gene-SNF32_03055;Note=frameshifted;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016622455.1;locus_tag=SNF32_03055;product=PH domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 141608 143060 . + . ID=gene-SNF32_03060;Name=SNF32_03060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03060;pseudo=true JAXGFV010000003.1 Protein Homology CDS 141608 143060 . + 0 ID=cds-SNF32_03060;Parent=gene-SNF32_03060;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012398.3;locus_tag=SNF32_03060;product=NAD-dependent succinate-semialdehyde dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 143113 144054 . - . ID=gene-SNF32_03065;Name=SNF32_03065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03065;pseudo=true JAXGFV010000003.1 Protein Homology CDS 143113 144054 . - 0 ID=cds-SNF32_03065;Parent=gene-SNF32_03065;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002309711.1;locus_tag=SNF32_03065;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 144167 144541 . - . ID=gene-SNF32_03070;Name=SNF32_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03070 JAXGFV010000003.1 Protein Homology CDS 144167 144541 . - 0 ID=cds-MDY4306759.1;Parent=gene-SNF32_03070;Dbxref=NCBI_GP:MDY4306759.1;Name=MDY4306759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002317104.1;locus_tag=SNF32_03070;product=PepSY domain-containing protein;protein_id=MDY4306759.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 144765 145819 . + . ID=gene-SNF32_03075;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=pseudogene;locus_tag=SNF32_03075;pseudo=true JAXGFV010000003.1 Protein Homology CDS 144765 145819 . + 0 ID=cds-SNF32_03075;Parent=gene-SNF32_03075;Note=frameshifted;gbkey=CDS;gene=pepA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016632088.1;locus_tag=SNF32_03075;product=glutamyl aminopeptidase;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 145942 146262 . + . ID=gene-SNF32_03080;Name=SNF32_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03080 JAXGFV010000003.1 Protein Homology CDS 145942 146262 . + 0 ID=cds-MDY4306760.1;Parent=gene-SNF32_03080;Dbxref=NCBI_GP:MDY4306760.1;Name=MDY4306760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724278.1;locus_tag=SNF32_03080;product=thioredoxin family protein;protein_id=MDY4306760.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 146284 146738 . + . ID=gene-SNF32_03085;Name=SNF32_03085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03085;pseudo=true JAXGFV010000003.1 Protein Homology CDS 146284 146738 . + 0 ID=cds-SNF32_03085;Parent=gene-SNF32_03085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016610011.1;locus_tag=SNF32_03085;product=universal stress protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 147005 147609 . + . ID=gene-SNF32_03090;Name=SNF32_03090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03090;pseudo=true JAXGFV010000003.1 Protein Homology CDS 147005 147609 . + 0 ID=cds-SNF32_03090;Parent=gene-SNF32_03090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736525.1;locus_tag=SNF32_03090;product=DUF4479 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 147658 148957 . - . ID=gene-SNF32_03095;Name=SNF32_03095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03095;pseudo=true JAXGFV010000003.1 Protein Homology CDS 147658 148957 . - 0 ID=cds-SNF32_03095;Parent=gene-SNF32_03095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722873.1;locus_tag=SNF32_03095;product=trypsin-like peptidase domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 149385 149863 . + . ID=gene-SNF32_03100;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=pseudogene;locus_tag=SNF32_03100;pseudo=true JAXGFV010000003.1 Protein Homology CDS 149385 149863 . + 0 ID=cds-SNF32_03100;Parent=gene-SNF32_03100;Note=frameshifted;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722872.1;locus_tag=SNF32_03100;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 150216 150611 . + . ID=gene-SNF32_03105;Name=SNF32_03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03105 JAXGFV010000003.1 Protein Homology CDS 150216 150611 . + 0 ID=cds-MDY4306761.1;Parent=gene-SNF32_03105;Dbxref=NCBI_GP:MDY4306761.1;Name=MDY4306761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736522.1;locus_tag=SNF32_03105;product=hypothetical protein;protein_id=MDY4306761.1;transl_table=11 JAXGFV010000003.1 Genbank gene 150583 150816 . + . ID=gene-SNF32_03110;Name=SNF32_03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03110 JAXGFV010000003.1 GeneMarkS-2+ CDS 150583 150816 . + 0 ID=cds-MDY4306762.1;Parent=gene-SNF32_03110;Dbxref=NCBI_GP:MDY4306762.1;Name=MDY4306762.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03110;product=hypothetical protein;protein_id=MDY4306762.1;transl_table=11 JAXGFV010000003.1 Genbank gene 150831 151847 . + . ID=gene-SNF32_03115;Name=SNF32_03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03115 JAXGFV010000003.1 GeneMarkS-2+ CDS 150831 151847 . + 0 ID=cds-MDY4306763.1;Parent=gene-SNF32_03115;Dbxref=NCBI_GP:MDY4306763.1;Name=MDY4306763.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03115;product=hypothetical protein;protein_id=MDY4306763.1;transl_table=11 JAXGFV010000003.1 Genbank gene 151844 152071 . + . ID=gene-SNF32_03120;Name=SNF32_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03120 JAXGFV010000003.1 GeneMarkS-2+ CDS 151844 152071 . + 0 ID=cds-MDY4306764.1;Parent=gene-SNF32_03120;Dbxref=NCBI_GP:MDY4306764.1;Name=MDY4306764.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03120;product=hypothetical protein;protein_id=MDY4306764.1;transl_table=11 JAXGFV010000003.1 Genbank gene 152104 152412 . + . ID=gene-SNF32_03125;Name=SNF32_03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03125 JAXGFV010000003.1 GeneMarkS-2+ CDS 152104 152412 . + 0 ID=cds-MDY4306765.1;Parent=gene-SNF32_03125;Dbxref=NCBI_GP:MDY4306765.1;Name=MDY4306765.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03125;product=hypothetical protein;protein_id=MDY4306765.1;transl_table=11 JAXGFV010000003.1 Genbank gene 152428 152622 . + . ID=gene-SNF32_03130;Name=SNF32_03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03130 JAXGFV010000003.1 Protein Homology CDS 152428 152622 . + 0 ID=cds-MDY4306766.1;Parent=gene-SNF32_03130;Dbxref=NCBI_GP:MDY4306766.1;Name=MDY4306766.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025153.3;locus_tag=SNF32_03130;product=DUF4176 domain-containing protein;protein_id=MDY4306766.1;transl_table=11 JAXGFV010000003.1 Genbank gene 154020 154319 . - . ID=gene-SNF32_03135;Name=SNF32_03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03135 JAXGFV010000003.1 GeneMarkS-2+ CDS 154020 154319 . - 0 ID=cds-MDY4306767.1;Parent=gene-SNF32_03135;Dbxref=NCBI_GP:MDY4306767.1;Name=MDY4306767.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03135;product=hypothetical protein;protein_id=MDY4306767.1;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 154404 155274 . + . ID=gene-SNF32_03140;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=pseudogene;locus_tag=SNF32_03140;pseudo=true JAXGFV010000003.1 Protein Homology CDS 154404 155274 . + 0 ID=cds-SNF32_03140;Parent=gene-SNF32_03140;Note=frameshifted;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: protein motif:HMM:NF012593.3;locus_tag=SNF32_03140;product=serine/threonine transporter SstT;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 155298 155509 . + . ID=gene-SNF32_03145;Name=SNF32_03145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03145;pseudo=true JAXGFV010000003.1 Protein Homology CDS 155298 155509 . + 0 ID=cds-SNF32_03145;Parent=gene-SNF32_03145;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736512.1;locus_tag=SNF32_03145;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank pseudogene 155742 156340 . + . ID=gene-SNF32_03150;Name=SNF32_03150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03150;pseudo=true JAXGFV010000003.1 Protein Homology CDS 155742 156340 . + 0 ID=cds-SNF32_03150;Parent=gene-SNF32_03150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010743031.1;locus_tag=SNF32_03150;product=DUF998 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000003.1 Genbank gene 156616 156935 . + . ID=gene-SNF32_03155;Name=SNF32_03155;end_range=156935,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03155;partial=true JAXGFV010000003.1 Protein Homology CDS 156616 156935 . + 0 ID=cds-MDY4306768.1;Parent=gene-SNF32_03155;Dbxref=NCBI_GP:MDY4306768.1;Name=MDY4306768.1;end_range=156935,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736510.1;locus_tag=SNF32_03155;partial=true;product=HTH domain-containing protein;protein_id=MDY4306768.1;transl_table=11 ##sequence-region JAXGFV010000030.1 1 31364 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000030.1 Genbank region 1 31364 . + . ID=JAXGFV010000030.1:1..31364;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000030.1 Genbank gene 1 501 . + . ID=gene-SNF32_11665;Name=SNF32_11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11665;partial=true;start_range=.,1 JAXGFV010000030.1 Protein Homology CDS 1 501 . + 0 ID=cds-MDY4307677.1;Parent=gene-SNF32_11665;Dbxref=NCBI_GP:MDY4307677.1;Name=MDY4307677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002325382.1;locus_tag=SNF32_11665;partial=true;product=lysostaphin resistance A-like protein;protein_id=MDY4307677.1;start_range=.,1;transl_table=11 JAXGFV010000030.1 Genbank pseudogene 671 1478 . - . ID=gene-SNF32_11670;Name=SNF32_11670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11670;pseudo=true JAXGFV010000030.1 Protein Homology CDS 671 1478 . - 0 ID=cds-SNF32_11670;Parent=gene-SNF32_11670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736688.1;locus_tag=SNF32_11670;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11 JAXGFV010000030.1 Genbank pseudogene 1532 2420 . - . ID=gene-SNF32_11675;Name=SNF32_11675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11675;pseudo=true JAXGFV010000030.1 Protein Homology CDS 1532 2420 . - 0 ID=cds-SNF32_11675;Parent=gene-SNF32_11675;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002365516.1;locus_tag=SNF32_11675;product=two-component system regulatory protein YycI;pseudo=true;transl_table=11 JAXGFV010000030.1 Genbank pseudogene 2401 3705 . - . ID=gene-SNF32_11680;Name=yycH;gbkey=Gene;gene=yycH;gene_biotype=pseudogene;locus_tag=SNF32_11680;pseudo=true JAXGFV010000030.1 Protein Homology CDS 2401 3705 . - 0 ID=cds-SNF32_11680;Parent=gene-SNF32_11680;Note=frameshifted;gbkey=CDS;gene=yycH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736690.1;locus_tag=SNF32_11680;product=two-component system activity regulator YycH;pseudo=true;transl_table=11 JAXGFV010000030.1 Genbank pseudogene 3702 5543 . - . ID=gene-SNF32_11685;Name=walK;gbkey=Gene;gene=walK;gene_biotype=pseudogene;locus_tag=SNF32_11685;pseudo=true JAXGFV010000030.1 Protein Homology CDS 3702 5543 . - 0 ID=cds-SNF32_11685;Parent=gene-SNF32_11685;Note=frameshifted;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=walK;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002357946.1;locus_tag=SNF32_11685;product=cell wall metabolism sensor histidine kinase WalK;pseudo=true;transl_table=11 JAXGFV010000030.1 Genbank pseudogene 5544 6256 . - . ID=gene-SNF32_11690;Name=yycF;gbkey=Gene;gene=yycF;gene_biotype=pseudogene;locus_tag=SNF32_11690;pseudo=true JAXGFV010000030.1 Protein Homology CDS 5544 6256 . - 0 ID=cds-SNF32_11690;Parent=gene-SNF32_11690;Note=frameshifted;gbkey=CDS;gene=yycF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005225282.1;locus_tag=SNF32_11690;product=response regulator YycF;pseudo=true;transl_table=11 JAXGFV010000030.1 Genbank pseudogene 6545 7551 . - . ID=gene-SNF32_11695;Name=SNF32_11695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11695;pseudo=true JAXGFV010000030.1 Protein Homology CDS 6545 7551 . - 0 ID=cds-SNF32_11695;Parent=gene-SNF32_11695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723592.1;locus_tag=SNF32_11695;product=DUF1002 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000030.1 Genbank gene 7808 8878 . - . ID=gene-SNF32_11700;Name=SNF32_11700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11700 JAXGFV010000030.1 Protein Homology CDS 7808 8878 . - 0 ID=cds-MDY4307678.1;Parent=gene-SNF32_11700;Dbxref=NCBI_GP:MDY4307678.1;Name=MDY4307678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736694.1;locus_tag=SNF32_11700;product=hypothetical protein;protein_id=MDY4307678.1;transl_table=11 JAXGFV010000030.1 Genbank gene 9240 10097 . - . ID=gene-SNF32_11705;Name=SNF32_11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11705 JAXGFV010000030.1 Protein Homology CDS 9240 10097 . - 0 ID=cds-MDY4307679.1;Parent=gene-SNF32_11705;Dbxref=NCBI_GP:MDY4307679.1;Name=MDY4307679.1;Ontology_term=GO:0005504;gbkey=CDS;go_function=fatty acid binding|0005504||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736695.1;locus_tag=SNF32_11705;product=DegV family protein;protein_id=MDY4307679.1;transl_table=11 JAXGFV010000030.1 Genbank pseudogene 10098 10651 . - . ID=gene-SNF32_11710;Name=SNF32_11710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11710;pseudo=true JAXGFV010000030.1 Protein Homology CDS 10098 10651 . - 0 ID=cds-SNF32_11710;Parent=gene-SNF32_11710;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002322652.1;locus_tag=SNF32_11710;product=DUF1836 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000030.1 Genbank gene 11039 11111 . + . ID=gene-SNF32_11715;Name=SNF32_11715;gbkey=Gene;gene_biotype=tRNA;locus_tag=SNF32_11715 JAXGFV010000030.1 tRNAscan-SE tRNA 11039 11111 . + . ID=rna-SNF32_11715;Parent=gene-SNF32_11715;anticodon=(pos:11072..11074);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_11715;product=tRNA-Lys JAXGFV010000030.1 tRNAscan-SE exon 11039 11111 . + . ID=exon-SNF32_11715-1;Parent=rna-SNF32_11715;anticodon=(pos:11072..11074);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_11715;product=tRNA-Lys JAXGFV010000030.1 Genbank pseudogene 11819 12820 . - . ID=gene-SNF32_11720;Name=SNF32_11720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11720;pseudo=true JAXGFV010000030.1 Protein Homology CDS 11819 12820 . - 0 ID=cds-SNF32_11720;Parent=gene-SNF32_11720;Note=frameshifted;Ontology_term=GO:0005975,GO:0016787,GO:0097367;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002344006.1;locus_tag=SNF32_11720;product=SIS domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000030.1 Genbank pseudogene 12832 13877 . - . ID=gene-SNF32_11725;Name=SNF32_11725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11725;pseudo=true JAXGFV010000030.1 Protein Homology CDS 12832 13877 . - 0 ID=cds-SNF32_11725;Parent=gene-SNF32_11725;Note=frameshifted;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002291046.1;locus_tag=SNF32_11725;product=SIS domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000030.1 Genbank pseudogene 13890 14712 . - . ID=gene-SNF32_11730;Name=SNF32_11730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11730;pseudo=true JAXGFV010000030.1 Protein Homology CDS 13890 14712 . - 0 ID=cds-SNF32_11730;Parent=gene-SNF32_11730;Note=frameshifted;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016626583.1;locus_tag=SNF32_11730;product=PTS system mannose/fructose/sorbose family transporter subunit IID;pseudo=true;transl_table=11 JAXGFV010000030.1 Genbank gene 14693 15478 . - . ID=gene-SNF32_11735;Name=SNF32_11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11735 JAXGFV010000030.1 Protein Homology CDS 14693 15478 . - 0 ID=cds-MDY4307680.1;Parent=gene-SNF32_11735;Dbxref=NCBI_GP:MDY4307680.1;Name=MDY4307680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002364159.1;locus_tag=SNF32_11735;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=MDY4307680.1;transl_table=11 JAXGFV010000030.1 Genbank pseudogene 15519 15964 . - . ID=gene-SNF32_11740;Name=SNF32_11740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11740;pseudo=true JAXGFV010000030.1 Protein Homology CDS 15519 15964 . - 0 ID=cds-SNF32_11740;Parent=gene-SNF32_11740;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629538.1;locus_tag=SNF32_11740;product=PTS sugar transporter subunit IIB;pseudo=true;transl_table=11 JAXGFV010000030.1 Genbank pseudogene 15975 16393 . - . ID=gene-SNF32_11745;Name=SNF32_11745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11745;pseudo=true JAXGFV010000030.1 Protein Homology CDS 15975 16393 . - 0 ID=cds-SNF32_11745;Parent=gene-SNF32_11745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002319018.1;locus_tag=SNF32_11745;product=PTS mannose transporter subunit IIA;pseudo=true;transl_table=11 JAXGFV010000030.1 Genbank gene 16606 16779 . - . ID=gene-SNF32_11750;Name=SNF32_11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11750 JAXGFV010000030.1 GeneMarkS-2+ CDS 16606 16779 . - 0 ID=cds-MDY4307681.1;Parent=gene-SNF32_11750;Dbxref=NCBI_GP:MDY4307681.1;Name=MDY4307681.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11750;product=hypothetical protein;protein_id=MDY4307681.1;transl_table=11 JAXGFV010000030.1 Genbank gene 16788 17033 . - . ID=gene-SNF32_11755;Name=SNF32_11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11755 JAXGFV010000030.1 GeneMarkS-2+ CDS 16788 17033 . - 0 ID=cds-MDY4307682.1;Parent=gene-SNF32_11755;Dbxref=NCBI_GP:MDY4307682.1;Name=MDY4307682.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11755;product=hypothetical protein;protein_id=MDY4307682.1;transl_table=11 JAXGFV010000030.1 Genbank gene 17030 17467 . - . ID=gene-SNF32_11760;Name=SNF32_11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11760 JAXGFV010000030.1 GeneMarkS-2+ CDS 17030 17467 . - 0 ID=cds-MDY4307683.1;Parent=gene-SNF32_11760;Dbxref=NCBI_GP:MDY4307683.1;Name=MDY4307683.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11760;product=hypothetical protein;protein_id=MDY4307683.1;transl_table=11 JAXGFV010000030.1 Genbank gene 17458 18903 . - . ID=gene-SNF32_11765;Name=SNF32_11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11765 JAXGFV010000030.1 Protein Homology CDS 17458 18903 . - 0 ID=cds-MDY4307684.1;Parent=gene-SNF32_11765;Dbxref=NCBI_GP:MDY4307684.1;Name=MDY4307684.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012385.3;locus_tag=SNF32_11765;product=sigma 54-interacting transcriptional regulator;protein_id=MDY4307684.1;transl_table=11 JAXGFV010000030.1 Genbank pseudogene 19821 22497 . - . ID=gene-SNF32_11770;Name=mngB;gbkey=Gene;gene=mngB;gene_biotype=pseudogene;locus_tag=SNF32_11770;pseudo=true JAXGFV010000030.1 Protein Homology CDS 19821 22497 . - 0 ID=cds-SNF32_11770;Parent=gene-SNF32_11770;Note=frameshifted;Ontology_term=GO:0006013,GO:0004559;gbkey=CDS;gene=mngB;go_function=alpha-mannosidase activity|0004559||IEA;go_process=mannose metabolic process|0006013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002325917.1;locus_tag=SNF32_11770;product=mannosylglycerate hydrolase;pseudo=true;transl_table=11 JAXGFV010000030.1 Genbank pseudogene 22711 23810 . - . ID=gene-SNF32_11775;Name=SNF32_11775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11775;pseudo=true JAXGFV010000030.1 Protein Homology CDS 22711 23810 . - 0 ID=cds-SNF32_11775;Parent=gene-SNF32_11775;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002325918.1;locus_tag=SNF32_11775;product=PTS fructose transporter subunit IIC;pseudo=true;transl_table=11 JAXGFV010000030.1 Genbank gene 23829 24152 . - . ID=gene-SNF32_11780;Name=SNF32_11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11780 JAXGFV010000030.1 Protein Homology CDS 23829 24152 . - 0 ID=cds-MDY4307685.1;Parent=gene-SNF32_11780;Dbxref=NCBI_GP:MDY4307685.1;Name=MDY4307685.1;Ontology_term=GO:0009401,GO:0008982,GO:0022877;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005237427.1;locus_tag=SNF32_11780;product=fructose PTS transporter subunit IIB;protein_id=MDY4307685.1;transl_table=11 JAXGFV010000030.1 Genbank pseudogene 24149 24588 . - . ID=gene-SNF32_11785;Name=SNF32_11785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11785;pseudo=true JAXGFV010000030.1 Protein Homology CDS 24149 24588 . - 0 ID=cds-SNF32_11785;Parent=gene-SNF32_11785;Note=frameshifted;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016621827.1;locus_tag=SNF32_11785;product=PTS sugar transporter subunit IIA;pseudo=true;transl_table=11 JAXGFV010000030.1 Genbank pseudogene 24856 26786 . + . ID=gene-SNF32_11790;Name=SNF32_11790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11790;pseudo=true JAXGFV010000030.1 Protein Homology CDS 24856 26786 . + 0 ID=cds-SNF32_11790;Parent=gene-SNF32_11790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008377162.1;locus_tag=SNF32_11790;product=BglG family transcription antiterminator;pseudo=true;transl_table=11 JAXGFV010000030.1 Genbank pseudogene 27006 27352 . - . ID=gene-SNF32_11795;Name=SNF32_11795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11795;pseudo=true JAXGFV010000030.1 Protein Homology CDS 27006 27352 . - 0 ID=cds-SNF32_11795;Parent=gene-SNF32_11795;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015509304.1;locus_tag=SNF32_11795;product=HAD hydrolase family protein;pseudo=true;transl_table=11 JAXGFV010000030.1 Genbank pseudogene 27406 29131 . - . ID=gene-SNF32_11800;Name=SNF32_11800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11800;pseudo=true JAXGFV010000030.1 Protein Homology CDS 27406 29131 . - 0 ID=cds-SNF32_11800;Parent=gene-SNF32_11800;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005234306.1;locus_tag=SNF32_11800;product=ABC transporter permease/substrate binding protein;pseudo=true;transl_table=11 JAXGFV010000030.1 Genbank pseudogene 29124 30315 . - . ID=gene-SNF32_11805;Name=SNF32_11805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11805;pseudo=true JAXGFV010000030.1 Protein Homology CDS 29124 30315 . - 0 ID=cds-SNF32_11805;Parent=gene-SNF32_11805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734321.1;locus_tag=SNF32_11805;product=glycine betaine/L-proline ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000030.1 Genbank pseudogene 30482 31125 . - . ID=gene-SNF32_11810;Name=SNF32_11810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11810;pseudo=true JAXGFV010000030.1 Protein Homology CDS 30482 31125 . - 0 ID=cds-SNF32_11810;Parent=gene-SNF32_11810;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010773022.1;locus_tag=SNF32_11810;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000031.1 1 30888 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000031.1 Genbank region 1 30888 . + . ID=JAXGFV010000031.1:1..30888;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000031.1 Genbank gene 1 286 . - . ID=gene-SNF32_11815;Name=SNF32_11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11815;partial=true;start_range=.,1 JAXGFV010000031.1 GeneMarkS-2+ CDS 1 286 . - 0 ID=cds-MDY4307686.1;Parent=gene-SNF32_11815;Dbxref=NCBI_GP:MDY4307686.1;Name=MDY4307686.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11815;partial=true;product=hypothetical protein;protein_id=MDY4307686.1;start_range=.,1;transl_table=11 JAXGFV010000031.1 Genbank pseudogene 297 1200 . - . ID=gene-SNF32_11820;Name=SNF32_11820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11820;pseudo=true JAXGFV010000031.1 Protein Homology CDS 297 1200 . - 0 ID=cds-SNF32_11820;Parent=gene-SNF32_11820;Note=frameshifted;Ontology_term=GO:0042545,GO:0030599;gbkey=CDS;go_function=pectinesterase activity|0030599||IEA;go_process=cell wall modification|0042545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734182.1;locus_tag=SNF32_11820;product=pectinesterase family protein;pseudo=true;transl_table=11 JAXGFV010000031.1 Genbank pseudogene 1200 2080 . - . ID=gene-SNF32_11825;Name=SNF32_11825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11825;pseudo=true JAXGFV010000031.1 Protein Homology CDS 1200 2080 . - 0 ID=cds-SNF32_11825;Parent=gene-SNF32_11825;Note=frameshifted;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016627941.1;locus_tag=SNF32_11825;product=prolyl oligopeptidase family serine peptidase;pseudo=true;transl_table=11 JAXGFV010000031.1 Genbank pseudogene 2086 3404 . - . ID=gene-SNF32_11830;Name=SNF32_11830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11830;pseudo=true JAXGFV010000031.1 Protein Homology CDS 2086 3404 . - 0 ID=cds-SNF32_11830;Parent=gene-SNF32_11830;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734179.1;locus_tag=SNF32_11830;product=glycoside hydrolase family 28 protein;pseudo=true;transl_table=11 JAXGFV010000031.1 Genbank pseudogene 3401 4467 . - . ID=gene-SNF32_11835;Name=SNF32_11835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11835;pseudo=true JAXGFV010000031.1 Protein Homology CDS 3401 4467 . - 0 ID=cds-SNF32_11835;Parent=gene-SNF32_11835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723547.1;locus_tag=SNF32_11835;product=glycoside hydrolase family 88 protein;pseudo=true;transl_table=11 JAXGFV010000031.1 Genbank pseudogene 4579 5784 . - . ID=gene-SNF32_11840;Name=SNF32_11840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11840;pseudo=true JAXGFV010000031.1 Protein Homology CDS 4579 5784 . - 0 ID=cds-SNF32_11840;Parent=gene-SNF32_11840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002300411.1;locus_tag=SNF32_11840;product=extracellular solute-binding protein;pseudo=true;transl_table=11 JAXGFV010000031.1 Genbank pseudogene 6080 6682 . - . ID=gene-SNF32_11845;Name=SNF32_11845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11845;pseudo=true JAXGFV010000031.1 Protein Homology CDS 6080 6682 . - 0 ID=cds-SNF32_11845;Parent=gene-SNF32_11845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177311.1;locus_tag=SNF32_11845;product=DUF624 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000031.1 Genbank pseudogene 6733 7661 . - . ID=gene-SNF32_11850;Name=SNF32_11850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11850;pseudo=true JAXGFV010000031.1 Protein Homology CDS 6733 7661 . - 0 ID=cds-SNF32_11850;Parent=gene-SNF32_11850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005229934.1;locus_tag=SNF32_11850;product=sugar ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000031.1 Genbank pseudogene 8022 8852 . + . ID=gene-SNF32_11855;Name=SNF32_11855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11855;pseudo=true JAXGFV010000031.1 Protein Homology CDS 8022 8852 . + 0 ID=cds-SNF32_11855;Parent=gene-SNF32_11855;Note=frameshifted;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005234200.1;locus_tag=SNF32_11855;product=carbohydrate ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000031.1 Genbank pseudogene 9018 11202 . - . ID=gene-SNF32_11860;Name=SNF32_11860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11860;pseudo=true JAXGFV010000031.1 Protein Homology CDS 9018 11202 . - 0 ID=cds-SNF32_11860;Parent=gene-SNF32_11860;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734173.1;locus_tag=SNF32_11860;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000031.1 Genbank pseudogene 11571 12976 . + . ID=gene-SNF32_11865;Name=SNF32_11865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11865;pseudo=true JAXGFV010000031.1 Protein Homology CDS 11571 12976 . + 0 ID=cds-SNF32_11865;Parent=gene-SNF32_11865;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723057.1;locus_tag=SNF32_11865;product=tagaturonate reductase;pseudo=true;transl_table=11 JAXGFV010000031.1 Genbank pseudogene 12981 14484 . + . ID=gene-SNF32_11870;Name=SNF32_11870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11870;pseudo=true JAXGFV010000031.1 Protein Homology CDS 12981 14484 . + 0 ID=cds-SNF32_11870;Parent=gene-SNF32_11870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734171.1;locus_tag=SNF32_11870;product=altronate dehydratase family protein;pseudo=true;transl_table=11 JAXGFV010000031.1 Genbank pseudogene 14560 15912 . + . ID=gene-SNF32_11875;Name=uxaC;gbkey=Gene;gene=uxaC;gene_biotype=pseudogene;locus_tag=SNF32_11875;pseudo=true JAXGFV010000031.1 Protein Homology CDS 14560 15912 . + 0 ID=cds-SNF32_11875;Parent=gene-SNF32_11875;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006064,GO:0008880;gbkey=CDS;gene=uxaC;go_function=glucuronate isomerase activity|0008880||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005228492.1;locus_tag=SNF32_11875;product=glucuronate isomerase;pseudo=true;transl_table=11 JAXGFV010000031.1 Genbank pseudogene 15932 16615 . + . ID=gene-SNF32_11880;Name=SNF32_11880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11880;pseudo=true JAXGFV010000031.1 Protein Homology CDS 15932 16615 . + 0 ID=cds-SNF32_11880;Parent=gene-SNF32_11880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723054.1;locus_tag=SNF32_11880;product=rhamnogalacturonan acetylesterase;pseudo=true;transl_table=11 JAXGFV010000031.1 Genbank gene 16725 17120 . - . ID=gene-SNF32_11885;Name=SNF32_11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11885 JAXGFV010000031.1 GeneMarkS-2+ CDS 16725 17120 . - 0 ID=cds-MDY4307687.1;Parent=gene-SNF32_11885;Dbxref=NCBI_GP:MDY4307687.1;Name=MDY4307687.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11885;product=hypothetical protein;protein_id=MDY4307687.1;transl_table=11 JAXGFV010000031.1 Genbank gene 17117 17254 . - . ID=gene-SNF32_11890;Name=SNF32_11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11890 JAXGFV010000031.1 GeneMarkS-2+ CDS 17117 17254 . - 0 ID=cds-MDY4307688.1;Parent=gene-SNF32_11890;Dbxref=NCBI_GP:MDY4307688.1;Name=MDY4307688.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11890;product=hypothetical protein;protein_id=MDY4307688.1;transl_table=11 JAXGFV010000031.1 Genbank gene 17427 17768 . - . ID=gene-SNF32_11895;Name=SNF32_11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11895 JAXGFV010000031.1 Protein Homology CDS 17427 17768 . - 0 ID=cds-MDY4307689.1;Parent=gene-SNF32_11895;Dbxref=NCBI_GP:MDY4307689.1;Name=MDY4307689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002307974.1;locus_tag=SNF32_11895;product=YlbF family regulator;protein_id=MDY4307689.1;transl_table=11 JAXGFV010000031.1 Genbank pseudogene 17836 20008 . - . ID=gene-SNF32_11900;Name=SNF32_11900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11900;pseudo=true JAXGFV010000031.1 Protein Homology CDS 17836 20008 . - 0 ID=cds-SNF32_11900;Parent=gene-SNF32_11900;Note=frameshifted;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002285990.1;locus_tag=SNF32_11900;product=PBP1A family penicillin-binding protein;pseudo=true;transl_table=11 JAXGFV010000031.1 Genbank pseudogene 20217 21066 . + . ID=gene-SNF32_11905;Name=SNF32_11905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11905;pseudo=true JAXGFV010000031.1 Protein Homology CDS 20217 21066 . + 0 ID=cds-SNF32_11905;Parent=gene-SNF32_11905;Note=frameshifted%3B internal stop;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005233387.1;locus_tag=SNF32_11905;product=RluA family pseudouridine synthase;pseudo=true;transl_table=11 JAXGFV010000031.1 Genbank gene 21228 21689 . + . ID=gene-SNF32_11910;Name=SNF32_11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11910 JAXGFV010000031.1 Protein Homology CDS 21228 21689 . + 0 ID=cds-MDY4307690.1;Parent=gene-SNF32_11910;Dbxref=NCBI_GP:MDY4307690.1;Name=MDY4307690.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018184.3;locus_tag=SNF32_11910;product=GyrI-like domain-containing protein;protein_id=MDY4307690.1;transl_table=11 JAXGFV010000031.1 Genbank pseudogene 21732 22000 . - . ID=gene-SNF32_11915;Name=SNF32_11915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11915;pseudo=true JAXGFV010000031.1 Protein Homology CDS 21732 22000 . - 0 ID=cds-SNF32_11915;Parent=gene-SNF32_11915;Note=frameshifted;Ontology_term=GO:0030541,GO:0051290,GO:0008657,GO:0042803;gbkey=CDS;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) inhibitor activity|0008657||IEA,protein homodimerization activity|0042803||IEA;go_process=plasmid partitioning|0030541||IEA,protein heterotetramerization|0051290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002334253.1;locus_tag=SNF32_11915;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;transl_table=11 JAXGFV010000031.1 Genbank gene 21990 22223 . - . ID=gene-SNF32_11920;Name=SNF32_11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11920 JAXGFV010000031.1 Protein Homology CDS 21990 22223 . - 0 ID=cds-MDY4307691.1;Parent=gene-SNF32_11920;Dbxref=NCBI_GP:MDY4307691.1;Name=MDY4307691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734162.1;locus_tag=SNF32_11920;product=DUF6290 family protein;protein_id=MDY4307691.1;transl_table=11 JAXGFV010000031.1 Genbank pseudogene 22409 23280 . - . ID=gene-SNF32_11925;Name=SNF32_11925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11925;pseudo=true JAXGFV010000031.1 Protein Homology CDS 22409 23280 . - 0 ID=cds-SNF32_11925;Parent=gene-SNF32_11925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723046.1;locus_tag=SNF32_11925;product=ROK family protein;pseudo=true;transl_table=11 JAXGFV010000031.1 Genbank pseudogene 23280 25904 . - . ID=gene-SNF32_11930;Name=SNF32_11930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11930;pseudo=true JAXGFV010000031.1 Protein Homology CDS 23280 25904 . - 0 ID=cds-SNF32_11930;Parent=gene-SNF32_11930;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002324610.1;locus_tag=SNF32_11930;product=alpha-mannosidase;pseudo=true;transl_table=11 JAXGFV010000031.1 Genbank gene 25972 27261 . - . ID=gene-SNF32_11935;Name=SNF32_11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11935 JAXGFV010000031.1 Protein Homology CDS 25972 27261 . - 0 ID=cds-MDY4307692.1;Parent=gene-SNF32_11935;Dbxref=NCBI_GP:MDY4307692.1;Name=MDY4307692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002345667.1;locus_tag=SNF32_11935;product=glycoside hydrolase family 125 protein;protein_id=MDY4307692.1;transl_table=11 JAXGFV010000031.1 Genbank pseudogene 27412 28473 . + . ID=gene-SNF32_11940;Name=SNF32_11940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11940;pseudo=true JAXGFV010000031.1 Protein Homology CDS 27412 28473 . + 0 ID=cds-SNF32_11940;Parent=gene-SNF32_11940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734158.1;locus_tag=SNF32_11940;product=substrate-binding domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000031.1 Genbank gene 28454 29356 . + . ID=gene-SNF32_11945;Name=SNF32_11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11945 JAXGFV010000031.1 Protein Homology CDS 28454 29356 . + 0 ID=cds-MDY4307693.1;Parent=gene-SNF32_11945;Dbxref=NCBI_GP:MDY4307693.1;Name=MDY4307693.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037611.3;locus_tag=SNF32_11945;product=glycoside hydrolase family 92 protein;protein_id=MDY4307693.1;transl_table=11 JAXGFV010000031.1 Genbank pseudogene 29424 30603 . + . ID=gene-SNF32_11950;Name=SNF32_11950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11950;pseudo=true JAXGFV010000031.1 Protein Homology CDS 29424 30603 . + 0 ID=cds-SNF32_11950;Parent=gene-SNF32_11950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019583.3;locus_tag=SNF32_11950;product=glycoside hydrolase family 92 protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000032.1 1 30410 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000032.1 Genbank region 1 30410 . + . ID=JAXGFV010000032.1:1..30410;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000032.1 Genbank gene 1 364 . + . ID=gene-SNF32_11955;Name=SNF32_11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11955;partial=true;start_range=.,1 JAXGFV010000032.1 Protein Homology CDS 1 364 . + 1 ID=cds-MDY4307694.1;Parent=gene-SNF32_11955;Dbxref=NCBI_GP:MDY4307694.1;Name=MDY4307694.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016249997.1;locus_tag=SNF32_11955;partial=true;product=LPXTG cell wall anchor domain-containing protein;protein_id=MDY4307694.1;start_range=.,1;transl_table=11 JAXGFV010000032.1 Genbank gene 419 667 . + . ID=gene-SNF32_11960;Name=SNF32_11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11960 JAXGFV010000032.1 GeneMarkS-2+ CDS 419 667 . + 0 ID=cds-MDY4307695.1;Parent=gene-SNF32_11960;Dbxref=NCBI_GP:MDY4307695.1;Name=MDY4307695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11960;product=hypothetical protein;protein_id=MDY4307695.1;transl_table=11 JAXGFV010000032.1 Genbank gene 869 1426 . + . ID=gene-SNF32_11965;Name=SNF32_11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11965 JAXGFV010000032.1 GeneMarkS-2+ CDS 869 1426 . + 0 ID=cds-MDY4307696.1;Parent=gene-SNF32_11965;Dbxref=NCBI_GP:MDY4307696.1;Name=MDY4307696.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11965;product=hypothetical protein;protein_id=MDY4307696.1;transl_table=11 JAXGFV010000032.1 Genbank gene 1410 1655 . + . ID=gene-SNF32_11970;Name=SNF32_11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11970 JAXGFV010000032.1 GeneMarkS-2+ CDS 1410 1655 . + 0 ID=cds-MDY4307697.1;Parent=gene-SNF32_11970;Dbxref=NCBI_GP:MDY4307697.1;Name=MDY4307697.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11970;product=hypothetical protein;protein_id=MDY4307697.1;transl_table=11 JAXGFV010000032.1 Genbank pseudogene 2090 2369 . + . ID=gene-SNF32_11975;Name=SNF32_11975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11975;pseudo=true JAXGFV010000032.1 Protein Homology CDS 2090 2369 . + 0 ID=cds-SNF32_11975;Parent=gene-SNF32_11975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735905.1;locus_tag=SNF32_11975;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000032.1 Genbank gene 2344 2712 . + . ID=gene-SNF32_11980;Name=SNF32_11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11980 JAXGFV010000032.1 GeneMarkS-2+ CDS 2344 2712 . + 0 ID=cds-MDY4307698.1;Parent=gene-SNF32_11980;Dbxref=NCBI_GP:MDY4307698.1;Name=MDY4307698.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_11980;product=hypothetical protein;protein_id=MDY4307698.1;transl_table=11 JAXGFV010000032.1 Genbank gene 2750 3205 . + . ID=gene-SNF32_11985;Name=SNF32_11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11985 JAXGFV010000032.1 Protein Homology CDS 2750 3205 . + 0 ID=cds-MDY4307699.1;Parent=gene-SNF32_11985;Dbxref=NCBI_GP:MDY4307699.1;Name=MDY4307699.1;Ontology_term=GO:0009058,GO:0005524,GO:0016881;gbkey=CDS;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF019850.3;locus_tag=SNF32_11985;product=Mur ligase family protein;protein_id=MDY4307699.1;transl_table=11 JAXGFV010000032.1 Genbank gene 3440 3811 . + . ID=gene-SNF32_11990;Name=SNF32_11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_11990 JAXGFV010000032.1 Protein Homology CDS 3440 3811 . + 0 ID=cds-MDY4307700.1;Parent=gene-SNF32_11990;Dbxref=NCBI_GP:MDY4307700.1;Name=MDY4307700.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014874.3;locus_tag=SNF32_11990;product=hypothetical protein;protein_id=MDY4307700.1;transl_table=11 JAXGFV010000032.1 Genbank pseudogene 4222 5435 . + . ID=gene-SNF32_11995;Name=SNF32_11995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_11995;pseudo=true JAXGFV010000032.1 Protein Homology CDS 4222 5435 . + 0 ID=cds-SNF32_11995;Parent=gene-SNF32_11995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735903.1;locus_tag=SNF32_11995;product=LCP family protein;pseudo=true;transl_table=11 JAXGFV010000032.1 Genbank pseudogene 5832 7593 . + . ID=gene-SNF32_12000;Name=SNF32_12000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12000;pseudo=true JAXGFV010000032.1 Protein Homology CDS 5832 7593 . + 0 ID=cds-SNF32_12000;Parent=gene-SNF32_12000;Note=frameshifted;Ontology_term=GO:0005975,GO:0004553,GO:0030246,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735902.1;locus_tag=SNF32_12000;product=carbohydrate-binding protein;pseudo=true;transl_table=11 JAXGFV010000032.1 Genbank pseudogene 7706 8175 . - . ID=gene-SNF32_12005;Name=SNF32_12005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12005;pseudo=true JAXGFV010000032.1 Protein Homology CDS 7706 8175 . - 0 ID=cds-SNF32_12005;Parent=gene-SNF32_12005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629457.1;locus_tag=SNF32_12005;product=TspO/MBR family protein;pseudo=true;transl_table=11 JAXGFV010000032.1 Genbank gene 8544 10100 . + . ID=gene-SNF32_12010;Name=SNF32_12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12010 JAXGFV010000032.1 Protein Homology CDS 8544 10100 . + 0 ID=cds-MDY4307701.1;Parent=gene-SNF32_12010;Dbxref=NCBI_GP:MDY4307701.1;Name=MDY4307701.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002315303.1;locus_tag=SNF32_12010;product=fibronectin type III domain-containing protein;protein_id=MDY4307701.1;transl_table=11 JAXGFV010000032.1 Genbank pseudogene 10465 11042 . + . ID=gene-SNF32_12015;Name=SNF32_12015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12015;pseudo=true JAXGFV010000032.1 Protein Homology CDS 10465 11042 . + 0 ID=cds-SNF32_12015;Parent=gene-SNF32_12015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002310335.1;locus_tag=SNF32_12015;product=lytic polysaccharide monooxygenase;pseudo=true;transl_table=11 JAXGFV010000032.1 Genbank pseudogene 11311 11963 . + . ID=gene-SNF32_12020;Name=SNF32_12020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12020;pseudo=true JAXGFV010000032.1 Protein Homology CDS 11311 11963 . + 0 ID=cds-SNF32_12020;Parent=gene-SNF32_12020;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008377248.1;locus_tag=SNF32_12020;product=YcjF family protein;pseudo=true;transl_table=11 JAXGFV010000032.1 Genbank pseudogene 12087 13455 . - . ID=gene-SNF32_12025;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=pseudogene;locus_tag=SNF32_12025;pseudo=true JAXGFV010000032.1 Protein Homology CDS 12087 13455 . - 0 ID=cds-SNF32_12025;Parent=gene-SNF32_12025;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002310337.1;locus_tag=SNF32_12025;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;pseudo=true;transl_table=11 JAXGFV010000032.1 Genbank pseudogene 13561 14357 . + . ID=gene-SNF32_12030;Name=recX;gbkey=Gene;gene=recX;gene_biotype=pseudogene;locus_tag=SNF32_12030;pseudo=true JAXGFV010000032.1 Protein Homology CDS 13561 14357 . + 0 ID=cds-SNF32_12030;Parent=gene-SNF32_12030;Note=frameshifted;Ontology_term=GO:0006282;gbkey=CDS;gene=recX;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016633355.1;locus_tag=SNF32_12030;product=recombination regulator RecX;pseudo=true;transl_table=11 JAXGFV010000032.1 Genbank pseudogene 14350 15533 . + . ID=gene-SNF32_12035;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=pseudogene;locus_tag=SNF32_12035;pseudo=true JAXGFV010000032.1 Protein Homology CDS 14350 15533 . + 0 ID=cds-SNF32_12035;Parent=gene-SNF32_12035;Note=frameshifted;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0004844;gbkey=CDS;gene=mutY;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002350836.1;locus_tag=SNF32_12035;product=A/G-specific adenine glycosylase;pseudo=true;transl_table=11 JAXGFV010000032.1 Genbank pseudogene 15626 16157 . + . ID=gene-SNF32_12040;Name=SNF32_12040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12040;pseudo=true JAXGFV010000032.1 Protein Homology CDS 15626 16157 . + 0 ID=cds-SNF32_12040;Parent=gene-SNF32_12040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002336938.1;locus_tag=SNF32_12040;product=DUF402 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000032.1 Genbank pseudogene 16205 16650 . - . ID=gene-SNF32_12045;Name=SNF32_12045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12045;pseudo=true JAXGFV010000032.1 Protein Homology CDS 16205 16650 . - 0 ID=cds-SNF32_12045;Parent=gene-SNF32_12045;Note=frameshifted;Ontology_term=GO:0008080,GO:0016747;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010767234.1;locus_tag=SNF32_12045;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 JAXGFV010000032.1 Genbank pseudogene 16785 17950 . + . ID=gene-SNF32_12050;Name=SNF32_12050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12050;pseudo=true JAXGFV010000032.1 Protein Homology CDS 16785 17950 . + 0 ID=cds-SNF32_12050;Parent=gene-SNF32_12050;Note=frameshifted;Ontology_term=GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002341268.1;locus_tag=SNF32_12050;product=AI-2E family transporter;pseudo=true;transl_table=11 JAXGFV010000032.1 Genbank pseudogene 18034 19405 . + . ID=gene-SNF32_12055;Name=SNF32_12055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12055;pseudo=true JAXGFV010000032.1 Protein Homology CDS 18034 19405 . + 0 ID=cds-SNF32_12055;Parent=gene-SNF32_12055;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016610209.1;locus_tag=SNF32_12055;product=hemolysin family protein;pseudo=true;transl_table=11 JAXGFV010000032.1 Genbank pseudogene 19650 21226 . + . ID=gene-SNF32_12060;Name=SNF32_12060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12060;pseudo=true JAXGFV010000032.1 Protein Homology CDS 19650 21226 . + 0 ID=cds-SNF32_12060;Parent=gene-SNF32_12060;Note=frameshifted;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002290823.1;locus_tag=SNF32_12060;product=peptide chain release factor 3;pseudo=true;transl_table=11 JAXGFV010000032.1 Genbank pseudogene 21703 22022 . - . ID=gene-SNF32_12065;Name=SNF32_12065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12065;pseudo=true JAXGFV010000032.1 Protein Homology CDS 21703 22022 . - 0 ID=cds-SNF32_12065;Parent=gene-SNF32_12065;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002326480.1;locus_tag=SNF32_12065;product=DUF1827 family protein;pseudo=true;transl_table=11 JAXGFV010000032.1 Genbank pseudogene 22216 24445 . - . ID=gene-SNF32_12070;Name=SNF32_12070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12070;pseudo=true JAXGFV010000032.1 Protein Homology CDS 22216 24445 . - 0 ID=cds-SNF32_12070;Parent=gene-SNF32_12070;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735886.1;locus_tag=SNF32_12070;product=AAA family ATPase;pseudo=true;transl_table=11 JAXGFV010000032.1 Genbank gene 24984 25250 . + . ID=gene-SNF32_12075;Name=SNF32_12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12075 JAXGFV010000032.1 Protein Homology CDS 24984 25250 . + 0 ID=cds-MDY4307702.1;Parent=gene-SNF32_12075;Dbxref=NCBI_GP:MDY4307702.1;Name=MDY4307702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010773230.1;locus_tag=SNF32_12075;product=phosphocarrier protein HPr;protein_id=MDY4307702.1;transl_table=11 JAXGFV010000032.1 Genbank pseudogene 25250 26976 . + . ID=gene-SNF32_12080;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=pseudogene;locus_tag=SNF32_12080;pseudo=true JAXGFV010000032.1 Protein Homology CDS 25250 26976 . + 0 ID=cds-SNF32_12080;Parent=gene-SNF32_12080;Note=frameshifted;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735885.1;locus_tag=SNF32_12080;product=phosphoenolpyruvate--protein phosphotransferase;pseudo=true;transl_table=11 JAXGFV010000032.1 Genbank pseudogene 27138 28171 . + . ID=gene-SNF32_12085;Name=SNF32_12085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12085;pseudo=true JAXGFV010000032.1 Protein Homology CDS 27138 28171 . + 0 ID=cds-SNF32_12085;Parent=gene-SNF32_12085;Note=frameshifted;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735884.1;locus_tag=SNF32_12085;product=glycosyltransferase;pseudo=true;transl_table=11 JAXGFV010000032.1 Genbank gene 28195 28338 . + . ID=gene-SNF32_12090;Name=SNF32_12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12090 JAXGFV010000032.1 GeneMarkS-2+ CDS 28195 28338 . + 0 ID=cds-MDY4307703.1;Parent=gene-SNF32_12090;Dbxref=NCBI_GP:MDY4307703.1;Name=MDY4307703.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12090;product=hypothetical protein;protein_id=MDY4307703.1;transl_table=11 JAXGFV010000032.1 Genbank pseudogene 28284 28864 . + . ID=gene-SNF32_12095;Name=SNF32_12095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12095;pseudo=true JAXGFV010000032.1 Protein Homology CDS 28284 28864 . + 0 ID=cds-SNF32_12095;Parent=gene-SNF32_12095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024831.3;locus_tag=SNF32_12095;product=glycosyltransferase;pseudo=true;transl_table=11 JAXGFV010000032.1 Genbank gene 28861 29397 . + . ID=gene-SNF32_12100;Name=SNF32_12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12100 JAXGFV010000032.1 Protein Homology CDS 28861 29397 . + 0 ID=cds-MDY4307704.1;Parent=gene-SNF32_12100;Dbxref=NCBI_GP:MDY4307704.1;Name=MDY4307704.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012744.3;locus_tag=SNF32_12100;product=glycosyltransferase;protein_id=MDY4307704.1;transl_table=11 JAXGFV010000032.1 Genbank gene 29500 29772 . + . ID=gene-SNF32_12105;Name=SNF32_12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12105 JAXGFV010000032.1 Protein Homology CDS 29500 29772 . + 0 ID=cds-MDY4307705.1;Parent=gene-SNF32_12105;Dbxref=NCBI_GP:MDY4307705.1;Name=MDY4307705.1;Ontology_term=GO:0050661;gbkey=CDS;go_function=NADP binding|0050661||IEA;inference=COORDINATES: protein motif:HMM:NF015411.3;locus_tag=SNF32_12105;product=NAD(P)-binding domain-containing protein;protein_id=MDY4307705.1;transl_table=11 JAXGFV010000032.1 Genbank gene 29808 30026 . + . ID=gene-SNF32_12110;Name=SNF32_12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12110 JAXGFV010000032.1 Protein Homology CDS 29808 30026 . + 0 ID=cds-MDY4307706.1;Parent=gene-SNF32_12110;Dbxref=NCBI_GP:MDY4307706.1;Name=MDY4307706.1;Ontology_term=GO:0050661;gbkey=CDS;go_function=NADP binding|0050661||IEA;inference=COORDINATES: protein motif:HMM:NF015411.3;locus_tag=SNF32_12110;product=NAD(P)-binding domain-containing protein;protein_id=MDY4307706.1;transl_table=11 JAXGFV010000032.1 Genbank pseudogene 30056 30402 . + . ID=gene-SNF32_12115;Name=SNF32_12115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12115;pseudo=true JAXGFV010000032.1 Protein Homology CDS 30056 30402 . + 0 ID=cds-SNF32_12115;Parent=gene-SNF32_12115;Note=frameshifted;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: protein motif:HMM:NF026183.3;locus_tag=SNF32_12115;product=NAD-binding protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000033.1 1 28262 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000033.1 Genbank region 1 28262 . + . ID=JAXGFV010000033.1:1..28262;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000033.1 Genbank pseudogene 12 645 . - . ID=gene-SNF32_12120;Name=SNF32_12120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12120;pseudo=true JAXGFV010000033.1 Protein Homology CDS 12 645 . - 0 ID=cds-SNF32_12120;Parent=gene-SNF32_12120;Note=frameshifted;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001261742.1;locus_tag=SNF32_12120;product=recombinase family protein;pseudo=true;transl_table=11 JAXGFV010000033.1 Genbank pseudogene 960 2573 . + . ID=gene-SNF32_12125;Name=SNF32_12125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12125;pseudo=true JAXGFV010000033.1 Protein Homology CDS 960 2573 . + 0 ID=cds-SNF32_12125;Parent=gene-SNF32_12125;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736433.1;locus_tag=SNF32_12125;product=alpha-glucosidase;pseudo=true;transl_table=11 JAXGFV010000033.1 Genbank pseudogene 2904 3146 . + . ID=gene-SNF32_12130;Name=SNF32_12130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12130;pseudo=true JAXGFV010000033.1 Protein Homology CDS 2904 3146 . + 0 ID=cds-SNF32_12130;Parent=gene-SNF32_12130;Note=internal stop;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016621797.1;locus_tag=SNF32_12130;product=type II toxin-antitoxin system prevent-host-death family antitoxin;pseudo=true;transl_table=11 JAXGFV010000033.1 Genbank pseudogene 3618 4050 . + . ID=gene-SNF32_12135;Name=SNF32_12135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12135;pseudo=true JAXGFV010000033.1 Protein Homology CDS 3618 4050 . + 0 ID=cds-SNF32_12135;Parent=gene-SNF32_12135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002315975.1;locus_tag=SNF32_12135;product=winged helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000033.1 Genbank pseudogene 4146 5251 . + . ID=gene-SNF32_12140;Name=SNF32_12140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12140;pseudo=true JAXGFV010000033.1 Protein Homology CDS 4146 5251 . + 0 ID=cds-SNF32_12140;Parent=gene-SNF32_12140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736431.1;locus_tag=SNF32_12140;product=NADH-dependent flavin oxidoreductase;pseudo=true;transl_table=11 JAXGFV010000033.1 Genbank pseudogene 5267 5942 . + . ID=gene-SNF32_12145;Name=SNF32_12145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12145;pseudo=true JAXGFV010000033.1 Protein Homology CDS 5267 5942 . + 0 ID=cds-SNF32_12145;Parent=gene-SNF32_12145;Note=frameshifted;Ontology_term=GO:0019172;gbkey=CDS;go_function=glyoxalase III activity|0019172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722542.1;locus_tag=SNF32_12145;product=type 1 glutamine amidotransferase domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000033.1 Genbank pseudogene 5969 6828 . + . ID=gene-SNF32_12150;Name=SNF32_12150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12150;pseudo=true JAXGFV010000033.1 Protein Homology CDS 5969 6828 . + 0 ID=cds-SNF32_12150;Parent=gene-SNF32_12150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736429.1;locus_tag=SNF32_12150;product=aldo/keto reductase;pseudo=true;transl_table=11 JAXGFV010000033.1 Genbank gene 7095 7304 . - . ID=gene-SNF32_12155;Name=SNF32_12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12155 JAXGFV010000033.1 GeneMarkS-2+ CDS 7095 7304 . - 0 ID=cds-MDY4307707.1;Parent=gene-SNF32_12155;Dbxref=NCBI_GP:MDY4307707.1;Name=MDY4307707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12155;product=hypothetical protein;protein_id=MDY4307707.1;transl_table=11 JAXGFV010000033.1 Genbank gene 7277 7606 . - . ID=gene-SNF32_12160;Name=SNF32_12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12160 JAXGFV010000033.1 GeneMarkS-2+ CDS 7277 7606 . - 0 ID=cds-MDY4307708.1;Parent=gene-SNF32_12160;Dbxref=NCBI_GP:MDY4307708.1;Name=MDY4307708.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12160;product=hypothetical protein;protein_id=MDY4307708.1;transl_table=11 JAXGFV010000033.1 Genbank pseudogene 7634 8833 . - . ID=gene-SNF32_12165;Name=SNF32_12165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12165;pseudo=true JAXGFV010000033.1 Protein Homology CDS 7634 8833 . - 0 ID=cds-SNF32_12165;Parent=gene-SNF32_12165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010748059.1;locus_tag=SNF32_12165;product=ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000033.1 Genbank gene 8830 9504 . - . ID=gene-SNF32_12170;Name=SNF32_12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12170 JAXGFV010000033.1 Protein Homology CDS 8830 9504 . - 0 ID=cds-MDY4307709.1;Parent=gene-SNF32_12170;Dbxref=NCBI_GP:MDY4307709.1;Name=MDY4307709.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736426.1;locus_tag=SNF32_12170;product=ABC transporter ATP-binding protein;protein_id=MDY4307709.1;transl_table=11 JAXGFV010000033.1 Genbank gene 9488 10339 . - . ID=gene-SNF32_12175;Name=SNF32_12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12175 JAXGFV010000033.1 Protein Homology CDS 9488 10339 . - 0 ID=cds-MDY4307710.1;Parent=gene-SNF32_12175;Dbxref=NCBI_GP:MDY4307710.1;Name=MDY4307710.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024829.3;locus_tag=SNF32_12175;product=HlyD family secretion protein;protein_id=MDY4307710.1;transl_table=11 JAXGFV010000033.1 Genbank gene 10285 10467 . - . ID=gene-SNF32_12180;Name=SNF32_12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12180 JAXGFV010000033.1 GeneMarkS-2+ CDS 10285 10467 . - 0 ID=cds-MDY4307711.1;Parent=gene-SNF32_12180;Dbxref=NCBI_GP:MDY4307711.1;Name=MDY4307711.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12180;product=hypothetical protein;protein_id=MDY4307711.1;transl_table=11 JAXGFV010000033.1 Genbank gene 10464 10691 . - . ID=gene-SNF32_12185;Name=SNF32_12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12185 JAXGFV010000033.1 GeneMarkS-2+ CDS 10464 10691 . - 0 ID=cds-MDY4307712.1;Parent=gene-SNF32_12185;Dbxref=NCBI_GP:MDY4307712.1;Name=MDY4307712.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12185;product=hypothetical protein;protein_id=MDY4307712.1;transl_table=11 JAXGFV010000033.1 Genbank gene 10976 11311 . + . ID=gene-SNF32_12190;Name=SNF32_12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12190 JAXGFV010000033.1 GeneMarkS-2+ CDS 10976 11311 . + 0 ID=cds-MDY4307713.1;Parent=gene-SNF32_12190;Dbxref=NCBI_GP:MDY4307713.1;Name=MDY4307713.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12190;product=hypothetical protein;protein_id=MDY4307713.1;transl_table=11 JAXGFV010000033.1 Genbank gene 11308 12048 . + . ID=gene-SNF32_12195;Name=SNF32_12195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12195 JAXGFV010000033.1 Protein Homology CDS 11308 12048 . + 0 ID=cds-MDY4307714.1;Parent=gene-SNF32_12195;Dbxref=NCBI_GP:MDY4307714.1;Name=MDY4307714.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025854.3;locus_tag=SNF32_12195;product=ATP-binding protein;protein_id=MDY4307714.1;transl_table=11 JAXGFV010000033.1 Genbank pseudogene 12071 12746 . + . ID=gene-SNF32_12200;Name=SNF32_12200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12200;pseudo=true JAXGFV010000033.1 Protein Homology CDS 12071 12746 . + 0 ID=cds-SNF32_12200;Parent=gene-SNF32_12200;Note=frameshifted;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010748055.1;locus_tag=SNF32_12200;product=response regulator transcription factor;pseudo=true;transl_table=11 JAXGFV010000033.1 Genbank pseudogene 13021 14318 . + . ID=gene-SNF32_12205;Name=SNF32_12205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12205;pseudo=true JAXGFV010000033.1 Protein Homology CDS 13021 14318 . + 0 ID=cds-SNF32_12205;Parent=gene-SNF32_12205;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002319530.1;locus_tag=SNF32_12205;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11 JAXGFV010000033.1 Genbank gene 14364 14531 . + . ID=gene-SNF32_12210;Name=SNF32_12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12210 JAXGFV010000033.1 GeneMarkS-2+ CDS 14364 14531 . + 0 ID=cds-MDY4307715.1;Parent=gene-SNF32_12210;Dbxref=NCBI_GP:MDY4307715.1;Name=MDY4307715.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12210;product=hypothetical protein;protein_id=MDY4307715.1;transl_table=11 JAXGFV010000033.1 Genbank gene 14580 15029 . + . ID=gene-SNF32_12215;Name=SNF32_12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12215 JAXGFV010000033.1 Protein Homology CDS 14580 15029 . + 0 ID=cds-MDY4307716.1;Parent=gene-SNF32_12215;Dbxref=NCBI_GP:MDY4307716.1;Name=MDY4307716.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016901.3;locus_tag=SNF32_12215;product=helix-turn-helix domain-containing protein;protein_id=MDY4307716.1;transl_table=11 JAXGFV010000033.1 Genbank gene 15026 15310 . + . ID=gene-SNF32_12220;Name=SNF32_12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12220 JAXGFV010000033.1 GeneMarkS-2+ CDS 15026 15310 . + 0 ID=cds-MDY4307717.1;Parent=gene-SNF32_12220;Dbxref=NCBI_GP:MDY4307717.1;Name=MDY4307717.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12220;product=hypothetical protein;protein_id=MDY4307717.1;transl_table=11 JAXGFV010000033.1 Genbank gene 15425 15811 . + . ID=gene-SNF32_12225;Name=SNF32_12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12225 JAXGFV010000033.1 GeneMarkS-2+ CDS 15425 15811 . + 0 ID=cds-MDY4307718.1;Parent=gene-SNF32_12225;Dbxref=NCBI_GP:MDY4307718.1;Name=MDY4307718.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12225;product=hypothetical protein;protein_id=MDY4307718.1;transl_table=11 JAXGFV010000033.1 Genbank pseudogene 15869 17362 . + . ID=gene-SNF32_12230;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=pseudogene;locus_tag=SNF32_12230;pseudo=true JAXGFV010000033.1 Protein Homology CDS 15869 17362 . + 0 ID=cds-SNF32_12230;Parent=gene-SNF32_12230;Note=frameshifted;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722534.1;locus_tag=SNF32_12230;product=glycerol kinase GlpK;pseudo=true;transl_table=11 JAXGFV010000033.1 Genbank pseudogene 17417 19200 . + . ID=gene-SNF32_12235;Name=glpO;gbkey=Gene;gene=glpO;gene_biotype=pseudogene;locus_tag=SNF32_12235;pseudo=true JAXGFV010000033.1 Protein Homology CDS 17417 19200 . + 0 ID=cds-SNF32_12235;Parent=gene-SNF32_12235;Note=frameshifted;Ontology_term=GO:0006072,GO:0004368;gbkey=CDS;gene=glpO;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010760493.1;locus_tag=SNF32_12235;product=type 1 glycerol-3-phosphate oxidase;pseudo=true;transl_table=11 JAXGFV010000033.1 Genbank gene 19202 19918 . + . ID=gene-SNF32_12240;Name=SNF32_12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12240 JAXGFV010000033.1 Protein Homology CDS 19202 19918 . + 0 ID=cds-MDY4307719.1;Parent=gene-SNF32_12240;Dbxref=NCBI_GP:MDY4307719.1;Name=MDY4307719.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002329636.1;locus_tag=SNF32_12240;product=MIP/aquaporin family protein;protein_id=MDY4307719.1;transl_table=11 JAXGFV010000033.1 Genbank pseudogene 20031 21181 . - . ID=gene-SNF32_12245;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=pseudogene;locus_tag=SNF32_12245;pseudo=true JAXGFV010000033.1 Protein Homology CDS 20031 21181 . - 0 ID=cds-SNF32_12245;Parent=gene-SNF32_12245;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002343318.1;locus_tag=SNF32_12245;product=lactaldehyde reductase;pseudo=true;transl_table=11 JAXGFV010000033.1 Genbank gene 21219 21827 . - . ID=gene-SNF32_12250;Name=SNF32_12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12250 JAXGFV010000033.1 Protein Homology CDS 21219 21827 . - 0 ID=cds-MDY4307720.1;Parent=gene-SNF32_12250;Dbxref=NCBI_GP:MDY4307720.1;Name=MDY4307720.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010621248.1;locus_tag=SNF32_12250;product=sugar O-acetyltransferase;protein_id=MDY4307720.1;transl_table=11 JAXGFV010000033.1 Genbank gene 21845 22654 . - . ID=gene-SNF32_12255;Name=rhaD;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=SNF32_12255 JAXGFV010000033.1 Protein Homology CDS 21845 22654 . - 0 ID=cds-MDY4307721.1;Parent=gene-SNF32_12255;Dbxref=NCBI_GP:MDY4307721.1;Name=MDY4307721.1;Ontology_term=GO:0008994;gbkey=CDS;gene=rhaD;go_function=rhamnulose-1-phosphate aldolase activity|0008994||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002325228.1;locus_tag=SNF32_12255;product=rhamnulose-1-phosphate aldolase;protein_id=MDY4307721.1;transl_table=11 JAXGFV010000033.1 Genbank pseudogene 23157 24410 . - . ID=gene-SNF32_12260;Name=rhaA;gbkey=Gene;gene=rhaA;gene_biotype=pseudogene;locus_tag=SNF32_12260;pseudo=true JAXGFV010000033.1 Protein Homology CDS 23157 24410 . - 0 ID=cds-SNF32_12260;Parent=gene-SNF32_12260;Note=frameshifted;Ontology_term=GO:0019301,GO:0008740;gbkey=CDS;gene=rhaA;go_function=L-rhamnose isomerase activity|0008740||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736414.1;locus_tag=SNF32_12260;product=L-rhamnose isomerase;pseudo=true;transl_table=11 JAXGFV010000033.1 Genbank pseudogene 24431 25871 . - . ID=gene-SNF32_12265;Name=rhaB;gbkey=Gene;gene=rhaB;gene_biotype=pseudogene;locus_tag=SNF32_12265;pseudo=true JAXGFV010000033.1 Protein Homology CDS 24431 25871 . - 0 ID=cds-SNF32_12265;Parent=gene-SNF32_12265;Note=frameshifted;Ontology_term=GO:0019301,GO:0008993;gbkey=CDS;gene=rhaB;go_function=rhamnulokinase activity|0008993||IEA;go_process=rhamnose catabolic process|0019301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013711958.1;locus_tag=SNF32_12265;product=rhamnulokinase;pseudo=true;transl_table=11 JAXGFV010000033.1 Genbank gene 25912 26595 . - . ID=gene-SNF32_12270;Name=SNF32_12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12270 JAXGFV010000033.1 Protein Homology CDS 25912 26595 . - 0 ID=cds-MDY4307722.1;Parent=gene-SNF32_12270;Dbxref=NCBI_GP:MDY4307722.1;Name=MDY4307722.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.3;locus_tag=SNF32_12270;product=MFS transporter;protein_id=MDY4307722.1;transl_table=11 JAXGFV010000033.1 Genbank gene 26696 27088 . - . ID=gene-SNF32_12275;Name=SNF32_12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12275 JAXGFV010000033.1 Protein Homology CDS 26696 27088 . - 0 ID=cds-MDY4307723.1;Parent=gene-SNF32_12275;Dbxref=NCBI_GP:MDY4307723.1;Name=MDY4307723.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.3;locus_tag=SNF32_12275;product=MFS transporter;protein_id=MDY4307723.1;transl_table=11 JAXGFV010000033.1 Genbank gene 27211 27375 . + . ID=gene-SNF32_12280;Name=SNF32_12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12280 JAXGFV010000033.1 GeneMarkS-2+ CDS 27211 27375 . + 0 ID=cds-MDY4307724.1;Parent=gene-SNF32_12280;Dbxref=NCBI_GP:MDY4307724.1;Name=MDY4307724.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12280;product=hypothetical protein;protein_id=MDY4307724.1;transl_table=11 JAXGFV010000033.1 Genbank gene 27440 27640 . + . ID=gene-SNF32_12285;Name=SNF32_12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12285 JAXGFV010000033.1 GeneMarkS-2+ CDS 27440 27640 . + 0 ID=cds-MDY4307725.1;Parent=gene-SNF32_12285;Dbxref=NCBI_GP:MDY4307725.1;Name=MDY4307725.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12285;product=hypothetical protein;protein_id=MDY4307725.1;transl_table=11 JAXGFV010000033.1 Genbank gene 27883 28203 . + . ID=gene-SNF32_12290;Name=SNF32_12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12290 JAXGFV010000033.1 Protein Homology CDS 27883 28203 . + 0 ID=cds-MDY4307726.1;Parent=gene-SNF32_12290;Dbxref=NCBI_GP:MDY4307726.1;Name=MDY4307726.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: protein motif:HMM:NF024242.3;locus_tag=SNF32_12290;product=AraC family transcriptional regulator;protein_id=MDY4307726.1;transl_table=11 ##sequence-region JAXGFV010000034.1 1 26185 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000034.1 Genbank region 1 26185 . + . ID=JAXGFV010000034.1:1..26185;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000034.1 Genbank pseudogene 1 1758 . + . ID=gene-SNF32_12295;Name=SNF32_12295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12295;pseudo=true JAXGFV010000034.1 Protein Homology CDS 1 1758 . + 1 ID=cds-SNF32_12295;Parent=gene-SNF32_12295;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287536.1;locus_tag=SNF32_12295;product=PTS sugar transporter subunit IIA;pseudo=true;transl_table=11 JAXGFV010000034.1 Genbank pseudogene 1777 2078 . + . ID=gene-SNF32_12300;Name=SNF32_12300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12300;pseudo=true JAXGFV010000034.1 Protein Homology CDS 1777 2078 . + 0 ID=cds-SNF32_12300;Parent=gene-SNF32_12300;Note=frameshifted;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002335168.1;locus_tag=SNF32_12300;product=PTS sugar transporter subunit IIB;pseudo=true;transl_table=11 JAXGFV010000034.1 Genbank gene 2103 3392 . + . ID=gene-SNF32_12305;Name=SNF32_12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12305 JAXGFV010000034.1 Protein Homology CDS 2103 3392 . + 0 ID=cds-MDY4307727.1;Parent=gene-SNF32_12305;Dbxref=NCBI_GP:MDY4307727.1;Name=MDY4307727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002294703.1;locus_tag=SNF32_12305;product=PTS sugar transporter subunit IIC;protein_id=MDY4307727.1;transl_table=11 JAXGFV010000034.1 Genbank pseudogene 3416 3801 . + . ID=gene-SNF32_12310;Name=SNF32_12310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12310;pseudo=true JAXGFV010000034.1 Protein Homology CDS 3416 3801 . + 0 ID=cds-SNF32_12310;Parent=gene-SNF32_12310;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736506.1;locus_tag=SNF32_12310;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11 JAXGFV010000034.1 Genbank gene 3824 4693 . + . ID=gene-SNF32_12315;Name=SNF32_12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12315 JAXGFV010000034.1 Protein Homology CDS 3824 4693 . + 0 ID=cds-MDY4307728.1;Parent=gene-SNF32_12315;Dbxref=NCBI_GP:MDY4307728.1;Name=MDY4307728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736505.1;locus_tag=SNF32_12315;product=class II fructose-bisphosphate aldolase;protein_id=MDY4307728.1;transl_table=11 JAXGFV010000034.1 Genbank pseudogene 4695 5313 . + . ID=gene-SNF32_12320;Name=SNF32_12320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12320;pseudo=true JAXGFV010000034.1 Protein Homology CDS 4695 5313 . + 0 ID=cds-SNF32_12320;Parent=gene-SNF32_12320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002307888.1;locus_tag=SNF32_12320;product=AAA family ATPase;pseudo=true;transl_table=11 JAXGFV010000034.1 Genbank gene 5431 6255 . - . ID=gene-SNF32_12325;Name=SNF32_12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12325 JAXGFV010000034.1 Protein Homology CDS 5431 6255 . - 0 ID=cds-MDY4307729.1;Parent=gene-SNF32_12325;Dbxref=NCBI_GP:MDY4307729.1;Name=MDY4307729.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736503.1;locus_tag=SNF32_12325;product=alpha/beta hydrolase;protein_id=MDY4307729.1;transl_table=11 JAXGFV010000034.1 Genbank pseudogene 6227 7816 . - . ID=gene-SNF32_12330;Name=SNF32_12330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12330;pseudo=true JAXGFV010000034.1 Protein Homology CDS 6227 7816 . - 0 ID=cds-SNF32_12330;Parent=gene-SNF32_12330;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002392286.1;locus_tag=SNF32_12330;product=PucR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000034.1 Genbank pseudogene 7937 10941 . + . ID=gene-SNF32_12335;Name=fdrA;gbkey=Gene;gene=fdrA;gene_biotype=pseudogene;locus_tag=SNF32_12335;pseudo=true JAXGFV010000034.1 Protein Homology CDS 7937 10941 . + 0 ID=cds-SNF32_12335;Parent=gene-SNF32_12335;Note=frameshifted%3B internal stop;Ontology_term=GO:0003824;gbkey=CDS;gene=fdrA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005225374.1;locus_tag=SNF32_12335;product=acyl-CoA synthetase FdrA;pseudo=true;transl_table=11 JAXGFV010000034.1 Genbank gene 10934 11287 . + . ID=gene-SNF32_12340;Name=SNF32_12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12340 JAXGFV010000034.1 GeneMarkS-2+ CDS 10934 11287 . + 0 ID=cds-MDY4307730.1;Parent=gene-SNF32_12340;Dbxref=NCBI_GP:MDY4307730.1;Name=MDY4307730.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12340;product=hypothetical protein;protein_id=MDY4307730.1;transl_table=11 JAXGFV010000034.1 Genbank gene 11367 11807 . + . ID=gene-SNF32_12345;Name=SNF32_12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12345 JAXGFV010000034.1 Protein Homology CDS 11367 11807 . + 0 ID=cds-MDY4307731.1;Parent=gene-SNF32_12345;Dbxref=NCBI_GP:MDY4307731.1;Name=MDY4307731.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022834.3;locus_tag=SNF32_12345;product=DUF2877 domain-containing protein;protein_id=MDY4307731.1;transl_table=11 JAXGFV010000034.1 Genbank pseudogene 11777 13020 . + . ID=gene-SNF32_12350;Name=SNF32_12350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12350;pseudo=true JAXGFV010000034.1 Protein Homology CDS 11777 13020 . + 0 ID=cds-SNF32_12350;Parent=gene-SNF32_12350;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005234497.1;locus_tag=SNF32_12350;product=MFS transporter;pseudo=true;transl_table=11 JAXGFV010000034.1 Genbank pseudogene 13043 13979 . + . ID=gene-SNF32_12355;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=pseudogene;locus_tag=SNF32_12355;pseudo=true JAXGFV010000034.1 Protein Homology CDS 13043 13979 . + 0 ID=cds-SNF32_12355;Parent=gene-SNF32_12355;Note=frameshifted;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736498.1;locus_tag=SNF32_12355;product=carbamate kinase;pseudo=true;transl_table=11 JAXGFV010000034.1 Genbank pseudogene 14000 15197 . + . ID=gene-SNF32_12360;Name=SNF32_12360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12360;pseudo=true JAXGFV010000034.1 Protein Homology CDS 14000 15197 . + 0 ID=cds-SNF32_12360;Parent=gene-SNF32_12360;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736497.1;locus_tag=SNF32_12360;product=dicarboxylate/amino acid:cation symporter;pseudo=true;transl_table=11 JAXGFV010000034.1 Genbank pseudogene 15400 17239 . + . ID=gene-SNF32_12365;Name=SNF32_12365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12365;pseudo=true JAXGFV010000034.1 Protein Homology CDS 15400 17239 . + 0 ID=cds-SNF32_12365;Parent=gene-SNF32_12365;Note=frameshifted;Ontology_term=GO:0009401,GO:0015759,GO:0015573;gbkey=CDS;go_function=beta-glucoside transmembrane transporter activity|0015573||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,beta-glucoside transport|0015759||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736496.1;locus_tag=SNF32_12365;product=beta-glucoside-specific PTS transporter subunit IIABC;pseudo=true;transl_table=11 JAXGFV010000034.1 Genbank pseudogene 17271 18730 . + . ID=gene-SNF32_12370;Name=SNF32_12370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12370;pseudo=true JAXGFV010000034.1 Protein Homology CDS 17271 18730 . + 0 ID=cds-SNF32_12370;Parent=gene-SNF32_12370;Note=frameshifted;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002289584.1;locus_tag=SNF32_12370;product=family 1 glycosylhydrolase;pseudo=true;transl_table=11 JAXGFV010000034.1 Genbank pseudogene 18781 19618 . + . ID=gene-SNF32_12375;Name=SNF32_12375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12375;pseudo=true JAXGFV010000034.1 Protein Homology CDS 18781 19618 . + 0 ID=cds-SNF32_12375;Parent=gene-SNF32_12375;Note=frameshifted;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736494.1;locus_tag=SNF32_12375;product=PRD domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000034.1 Genbank pseudogene 20120 21055 . + . ID=gene-SNF32_12380;Name=SNF32_12380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12380;pseudo=true JAXGFV010000034.1 Protein Homology CDS 20120 21055 . + 0 ID=cds-SNF32_12380;Parent=gene-SNF32_12380;Note=frameshifted;Ontology_term=GO:0015940,GO:0008677,GO:0050661;gbkey=CDS;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA,NADP binding|0050661||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015081805.1;locus_tag=SNF32_12380;product=2-dehydropantoate 2-reductase;pseudo=true;transl_table=11 JAXGFV010000034.1 Genbank gene 21086 22120 . + . ID=gene-SNF32_12385;Name=SNF32_12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12385 JAXGFV010000034.1 Protein Homology CDS 21086 22120 . + 0 ID=cds-MDY4307732.1;Parent=gene-SNF32_12385;Dbxref=NCBI_GP:MDY4307732.1;Name=MDY4307732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007208410.1;locus_tag=SNF32_12385;product=PTS sugar transporter subunit IIC;protein_id=MDY4307732.1;transl_table=11 JAXGFV010000034.1 Genbank pseudogene 22256 22988 . + . ID=gene-SNF32_12390;Name=truA;gbkey=Gene;gene=truA;gene_biotype=pseudogene;locus_tag=SNF32_12390;pseudo=true JAXGFV010000034.1 Protein Homology CDS 22256 22988 . + 0 ID=cds-SNF32_12390;Parent=gene-SNF32_12390;Note=frameshifted;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005225435.1;locus_tag=SNF32_12390;product=tRNA pseudouridine(38-40) synthase TruA;pseudo=true;transl_table=11 JAXGFV010000034.1 Genbank pseudogene 23087 23832 . + . ID=gene-SNF32_12395;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=pseudogene;locus_tag=SNF32_12395;pseudo=true JAXGFV010000034.1 Protein Homology CDS 23087 23832 . + 0 ID=cds-SNF32_12395;Parent=gene-SNF32_12395;Note=frameshifted;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016631744.1;locus_tag=SNF32_12395;product=peptide-methionine (S)-S-oxide reductase MsrA;pseudo=true;transl_table=11 JAXGFV010000034.1 Genbank pseudogene 24108 25102 . + . ID=gene-SNF32_12400;Name=SNF32_12400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12400;pseudo=true JAXGFV010000034.1 Protein Homology CDS 24108 25102 . + 0 ID=cds-SNF32_12400;Parent=gene-SNF32_12400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177822.1;locus_tag=SNF32_12400;product=aldo/keto reductase;pseudo=true;transl_table=11 JAXGFV010000034.1 Genbank gene 25608 25985 . - . ID=gene-SNF32_12405;Name=SNF32_12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12405 JAXGFV010000034.1 Protein Homology CDS 25608 25985 . - 0 ID=cds-MDY4307733.1;Parent=gene-SNF32_12405;Dbxref=NCBI_GP:MDY4307733.1;Name=MDY4307733.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: protein motif:HMM:NF021981.3;locus_tag=SNF32_12405;product=S26 family signal peptidase;protein_id=MDY4307733.1;transl_table=11 ##sequence-region JAXGFV010000035.1 1 25926 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000035.1 Genbank region 1 25926 . + . ID=JAXGFV010000035.1:1..25926;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000035.1 Genbank pseudogene 290 699 . + . ID=gene-SNF32_12410;Name=SNF32_12410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12410;pseudo=true JAXGFV010000035.1 Protein Homology CDS 290 699 . + 0 ID=cds-SNF32_12410;Parent=gene-SNF32_12410;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002321368.1;locus_tag=SNF32_12410;product=universal stress protein;pseudo=true;transl_table=11 JAXGFV010000035.1 Genbank pseudogene 772 1025 . - . ID=gene-SNF32_12415;Name=SNF32_12415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12415;pseudo=true JAXGFV010000035.1 Protein Homology CDS 772 1025 . - 0 ID=cds-SNF32_12415;Parent=gene-SNF32_12415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735611.1;locus_tag=SNF32_12415;product=glucose uptake protein;pseudo=true;transl_table=11 JAXGFV010000035.1 Genbank gene 1194 1457 . + . ID=gene-SNF32_12420;Name=SNF32_12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12420 JAXGFV010000035.1 Protein Homology CDS 1194 1457 . + 0 ID=cds-MDY4307734.1;Parent=gene-SNF32_12420;Dbxref=NCBI_GP:MDY4307734.1;Name=MDY4307734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002292935.1;locus_tag=SNF32_12420;product=hypothetical protein;protein_id=MDY4307734.1;transl_table=11 JAXGFV010000035.1 Genbank pseudogene 1480 1667 . + . ID=gene-SNF32_12425;Name=SNF32_12425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12425;pseudo=true JAXGFV010000035.1 Protein Homology CDS 1480 1667 . + 0 ID=cds-SNF32_12425;Parent=gene-SNF32_12425;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002344185.1;locus_tag=SNF32_12425;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000035.1 Genbank gene 1829 2014 . - . ID=gene-SNF32_12430;Name=SNF32_12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12430 JAXGFV010000035.1 Protein Homology CDS 1829 2014 . - 0 ID=cds-MDY4307735.1;Parent=gene-SNF32_12430;Dbxref=NCBI_GP:MDY4307735.1;Name=MDY4307735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002288064.1;locus_tag=SNF32_12430;product=hypothetical protein;protein_id=MDY4307735.1;transl_table=11 JAXGFV010000035.1 Genbank pseudogene 2173 2543 . + . ID=gene-SNF32_12435;Name=SNF32_12435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12435;pseudo=true JAXGFV010000035.1 Protein Homology CDS 2173 2543 . + 0 ID=cds-SNF32_12435;Parent=gene-SNF32_12435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002329142.1;locus_tag=SNF32_12435;product=YxeA family protein;pseudo=true;transl_table=11 JAXGFV010000035.1 Genbank pseudogene 2636 3056 . - . ID=gene-SNF32_12440;Name=SNF32_12440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12440;pseudo=true JAXGFV010000035.1 Protein Homology CDS 2636 3056 . - 0 ID=cds-SNF32_12440;Parent=gene-SNF32_12440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735606.1;locus_tag=SNF32_12440;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000035.1 Genbank gene 3116 3865 . - . ID=gene-SNF32_12445;Name=SNF32_12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12445 JAXGFV010000035.1 Protein Homology CDS 3116 3865 . - 0 ID=cds-MDY4307736.1;Parent=gene-SNF32_12445;Dbxref=NCBI_GP:MDY4307736.1;Name=MDY4307736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016631789.1;locus_tag=SNF32_12445;product=C39 family peptidase;protein_id=MDY4307736.1;transl_table=11 JAXGFV010000035.1 Genbank gene 4133 4330 . + . ID=gene-SNF32_12450;Name=SNF32_12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12450 JAXGFV010000035.1 Protein Homology CDS 4133 4330 . + 0 ID=cds-MDY4307737.1;Parent=gene-SNF32_12450;Dbxref=NCBI_GP:MDY4307737.1;Name=MDY4307737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002325694.1;locus_tag=SNF32_12450;product=hypothetical protein;protein_id=MDY4307737.1;transl_table=11 JAXGFV010000035.1 Genbank pseudogene 4614 5056 . + . ID=gene-SNF32_12455;Name=SNF32_12455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12455;pseudo=true JAXGFV010000035.1 Protein Homology CDS 4614 5056 . + 0 ID=cds-SNF32_12455;Parent=gene-SNF32_12455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724091.1;locus_tag=SNF32_12455;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000035.1 Genbank gene 5125 5721 . - . ID=gene-SNF32_12460;Name=SNF32_12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12460 JAXGFV010000035.1 Protein Homology CDS 5125 5721 . - 0 ID=cds-MDY4307738.1;Parent=gene-SNF32_12460;Dbxref=NCBI_GP:MDY4307738.1;Name=MDY4307738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002288054.1;locus_tag=SNF32_12460;product=nitroreductase family protein;protein_id=MDY4307738.1;transl_table=11 JAXGFV010000035.1 Genbank pseudogene 6092 7553 . + . ID=gene-SNF32_12465;Name=SNF32_12465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12465;pseudo=true JAXGFV010000035.1 Protein Homology CDS 6092 7553 . + 0 ID=cds-SNF32_12465;Parent=gene-SNF32_12465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002288052.1;locus_tag=SNF32_12465;product=peptide MFS transporter;pseudo=true;transl_table=11 JAXGFV010000035.1 Genbank pseudogene 7695 11219 . + . ID=gene-SNF32_12470;Name=SNF32_12470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12470;pseudo=true JAXGFV010000035.1 Protein Homology CDS 7695 11219 . + 0 ID=cds-SNF32_12470;Parent=gene-SNF32_12470;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002345076.1;locus_tag=SNF32_12470;product=PD-(D/E)XK nuclease family protein;pseudo=true;transl_table=11 JAXGFV010000035.1 Genbank pseudogene 11216 14930 . + . ID=gene-SNF32_12475;Name=addA;gbkey=Gene;gene=addA;gene_biotype=pseudogene;locus_tag=SNF32_12475;pseudo=true JAXGFV010000035.1 Protein Homology CDS 11216 14930 . + 0 ID=cds-SNF32_12475;Parent=gene-SNF32_12475;Note=frameshifted;Ontology_term=GO:0000724,GO:0003678,GO:0016818;gbkey=CDS;gene=addA;go_function=DNA helicase activity|0003678||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735599.1;locus_tag=SNF32_12475;product=helicase-exonuclease AddAB subunit AddA;pseudo=true;transl_table=11 JAXGFV010000035.1 Genbank pseudogene 14997 15335 . + . ID=gene-SNF32_12480;Name=SNF32_12480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12480;pseudo=true JAXGFV010000035.1 Protein Homology CDS 14997 15335 . + 0 ID=cds-SNF32_12480;Parent=gene-SNF32_12480;Note=frameshifted%3B internal stop;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002358035.1;locus_tag=SNF32_12480;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000035.1 Genbank pseudogene 15643 16685 . + . ID=gene-SNF32_12485;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=pseudogene;locus_tag=SNF32_12485;pseudo=true JAXGFV010000035.1 Protein Homology CDS 15643 16685 . + 0 ID=cds-SNF32_12485;Parent=gene-SNF32_12485;Note=frameshifted;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016171868.1;locus_tag=SNF32_12485;product=phenylalanine--tRNA ligase subunit alpha;pseudo=true;transl_table=11 JAXGFV010000035.1 Genbank gene 16690 19110 . + . ID=gene-SNF32_12490;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=SNF32_12490 JAXGFV010000035.1 Protein Homology CDS 16690 19110 . + 0 ID=cds-MDY4307739.1;Parent=gene-SNF32_12490;Dbxref=NCBI_GP:MDY4307739.1;Name=MDY4307739.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010738718.1;locus_tag=SNF32_12490;product=phenylalanine--tRNA ligase subunit beta;protein_id=MDY4307739.1;transl_table=11 JAXGFV010000035.1 Genbank pseudogene 19180 20192 . - . ID=gene-SNF32_12495;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=pseudogene;locus_tag=SNF32_12495;pseudo=true JAXGFV010000035.1 Protein Homology CDS 19180 20192 . - 0 ID=cds-SNF32_12495;Parent=gene-SNF32_12495;Note=frameshifted;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735595.1;locus_tag=SNF32_12495;product=tryptophan--tRNA ligase;pseudo=true;transl_table=11 JAXGFV010000035.1 Genbank pseudogene 20443 21178 . + . ID=gene-SNF32_12500;Name=SNF32_12500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12500;pseudo=true JAXGFV010000035.1 Protein Homology CDS 20443 21178 . + 0 ID=cds-SNF32_12500;Parent=gene-SNF32_12500;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002364205.1;locus_tag=SNF32_12500;product=amino acid ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000035.1 Genbank pseudogene 21192 22005 . + . ID=gene-SNF32_12505;Name=SNF32_12505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12505;pseudo=true JAXGFV010000035.1 Protein Homology CDS 21192 22005 . + 0 ID=cds-SNF32_12505;Parent=gene-SNF32_12505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010751090.1;locus_tag=SNF32_12505;product=transporter substrate-binding domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000035.1 Genbank pseudogene 22018 22662 . + . ID=gene-SNF32_12510;Name=SNF32_12510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12510;pseudo=true JAXGFV010000035.1 Protein Homology CDS 22018 22662 . + 0 ID=cds-SNF32_12510;Parent=gene-SNF32_12510;Note=frameshifted;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735592.1;locus_tag=SNF32_12510;product=amino acid ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000035.1 Genbank pseudogene 22677 23332 . + . ID=gene-SNF32_12515;Name=SNF32_12515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12515;pseudo=true JAXGFV010000035.1 Protein Homology CDS 22677 23332 . + 0 ID=cds-SNF32_12515;Parent=gene-SNF32_12515;Note=frameshifted;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016631187.1;locus_tag=SNF32_12515;product=amino acid ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000035.1 Genbank pseudogene 23537 24363 . + . ID=gene-SNF32_12520;Name=racE;gbkey=Gene;gene=racE;gene_biotype=pseudogene;locus_tag=SNF32_12520;pseudo=true JAXGFV010000035.1 Protein Homology CDS 23537 24363 . + 0 ID=cds-SNF32_12520;Parent=gene-SNF32_12520;Note=frameshifted;Ontology_term=GO:0006807,GO:0008881;gbkey=CDS;gene=racE;go_function=glutamate racemase activity|0008881||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724592.1;locus_tag=SNF32_12520;product=glutamate racemase;pseudo=true;transl_table=11 JAXGFV010000035.1 Genbank pseudogene 24363 25713 . + . ID=gene-SNF32_12525;Name=rph;gbkey=Gene;gene=rph;gene_biotype=pseudogene;locus_tag=SNF32_12525;pseudo=true JAXGFV010000035.1 Protein Homology CDS 24363 25713 . + 0 ID=cds-SNF32_12525;Parent=gene-SNF32_12525;Note=frameshifted;Ontology_term=GO:0008033,GO:0004549;gbkey=CDS;gene=rph;go_function=tRNA-specific ribonuclease activity|0004549||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005877097.1;locus_tag=SNF32_12525;product=ribonuclease PH;pseudo=true;transl_table=11 JAXGFV010000035.1 Genbank gene 25714 25926 . + . ID=gene-SNF32_12530;Name=SNF32_12530;end_range=25926,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12530;partial=true JAXGFV010000035.1 Protein Homology CDS 25714 25926 . + 0 ID=cds-MDY4307740.1;Parent=gene-SNF32_12530;Dbxref=NCBI_GP:MDY4307740.1;Name=MDY4307740.1;end_range=25926,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724525.1;locus_tag=SNF32_12530;partial=true;product=metallophosphoesterase family protein;protein_id=MDY4307740.1;transl_table=11 ##sequence-region JAXGFV010000036.1 1 25078 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000036.1 Genbank region 1 25078 . + . ID=JAXGFV010000036.1:1..25078;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000036.1 Genbank pseudogene 145 2690 . - . ID=gene-SNF32_12535;Name=SNF32_12535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12535;pseudo=true JAXGFV010000036.1 Protein Homology CDS 145 2690 . - 0 ID=cds-SNF32_12535;Parent=gene-SNF32_12535;Note=frameshifted;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736469.1;locus_tag=SNF32_12535;product=HAD-IC family P-type ATPase;pseudo=true;transl_table=11 JAXGFV010000036.1 Genbank pseudogene 2844 4296 . - . ID=gene-SNF32_12540;Name=SNF32_12540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12540;pseudo=true JAXGFV010000036.1 Protein Homology CDS 2844 4296 . - 0 ID=cds-SNF32_12540;Parent=gene-SNF32_12540;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723849.1;locus_tag=SNF32_12540;product=amino acid permease;pseudo=true;transl_table=11 JAXGFV010000036.1 Genbank pseudogene 4324 6158 . - . ID=gene-SNF32_12545;Name=tdc;gbkey=Gene;gene=tdc;gene_biotype=pseudogene;locus_tag=SNF32_12545;pseudo=true JAXGFV010000036.1 Protein Homology CDS 4324 6158 . - 0 ID=cds-SNF32_12545;Parent=gene-SNF32_12545;Note=frameshifted;Ontology_term=GO:0006572,GO:0004837;gbkey=CDS;gene=tdc;go_function=tyrosine decarboxylase activity|0004837||IEA;go_process=tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723850.1;locus_tag=SNF32_12545;product=tyrosine decarboxylase;pseudo=true;transl_table=11 JAXGFV010000036.1 Genbank pseudogene 6648 8077 . + . ID=gene-SNF32_12550;Name=SNF32_12550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12550;pseudo=true JAXGFV010000036.1 Protein Homology CDS 6648 8077 . + 0 ID=cds-SNF32_12550;Parent=gene-SNF32_12550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736472.1;locus_tag=SNF32_12550;product=DNA-binding protein;pseudo=true;transl_table=11 JAXGFV010000036.1 Genbank pseudogene 8303 8658 . - . ID=gene-SNF32_12555;Name=SNF32_12555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12555;pseudo=true JAXGFV010000036.1 Protein Homology CDS 8303 8658 . - 0 ID=cds-SNF32_12555;Parent=gene-SNF32_12555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724648.1;locus_tag=SNF32_12555;product=DUF1622 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000036.1 Genbank gene 8658 9020 . - . ID=gene-SNF32_12560;Name=SNF32_12560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12560 JAXGFV010000036.1 Protein Homology CDS 8658 9020 . - 0 ID=cds-MDY4307741.1;Parent=gene-SNF32_12560;Dbxref=NCBI_GP:MDY4307741.1;Name=MDY4307741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002337917.1;locus_tag=SNF32_12560;product=DUF1622 domain-containing protein;protein_id=MDY4307741.1;transl_table=11 JAXGFV010000036.1 Genbank direct_repeat 9180 11128 . + . ID=id-JAXGFV010000036.1:9180..11128;gbkey=repeat_region;inference=COORDINATES: alignment:pilercr:v1.02;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=9246..9281;rpt_unit_seq=gttttggaagcattcaattcaacatagctctaaaac JAXGFV010000036.1 Genbank pseudogene 11236 11875 . - . ID=gene-SNF32_12565;Name=csn2;gbkey=Gene;gene=csn2;gene_biotype=pseudogene;locus_tag=SNF32_12565;pseudo=true JAXGFV010000036.1 Protein Homology CDS 11236 11875 . - 0 ID=cds-SNF32_12565;Parent=gene-SNF32_12565;Note=frameshifted;Ontology_term=GO:0043571,GO:0003674;gbkey=CDS;gene=csn2;go_function=molecular_function|0003674||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002352407.1;locus_tag=SNF32_12565;product=type II-A CRISPR-associated protein Csn2;pseudo=true;transl_table=11 JAXGFV010000036.1 Genbank gene 11865 12209 . - . ID=gene-SNF32_12570;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=SNF32_12570 JAXGFV010000036.1 Protein Homology CDS 11865 12209 . - 0 ID=cds-MDY4307742.1;Parent=gene-SNF32_12570;Dbxref=NCBI_GP:MDY4307742.1;Name=MDY4307742.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019803445.1;locus_tag=SNF32_12570;product=CRISPR-associated endonuclease Cas2;protein_id=MDY4307742.1;transl_table=11 JAXGFV010000036.1 Genbank pseudogene 12206 13069 . - . ID=gene-SNF32_12575;Name=cas1;gbkey=Gene;gene=cas1;gene_biotype=pseudogene;locus_tag=SNF32_12575;pseudo=true JAXGFV010000036.1 Protein Homology CDS 12206 13069 . - 0 ID=cds-SNF32_12575;Parent=gene-SNF32_12575;Note=frameshifted;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004520,GO:0046872;gbkey=CDS;gene=cas1;go_function=nucleic acid binding|0003676||IEA,DNA endonuclease activity|0004520||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000539858.1;locus_tag=SNF32_12575;product=type II CRISPR-associated endonuclease Cas1;pseudo=true;transl_table=11 JAXGFV010000036.1 Genbank pseudogene 13048 17004 . - . ID=gene-SNF32_12580;Name=cas9;gbkey=Gene;gene=cas9;gene_biotype=pseudogene;locus_tag=SNF32_12580;pseudo=true JAXGFV010000036.1 Protein Homology CDS 13048 17004 . - 0 ID=cds-SNF32_12580;Parent=gene-SNF32_12580;Note=Cas9%2C originally named Csn1%2C is the large%2C multifunctional signature protein of type II CRISPR/Cas systems. It is well known even to general audiences because its RNA-guided endonuclease activity has made it a popular tool for custom editing of eukaryotic genomes.%3B frameshifted%3B internal stop;Ontology_term=GO:0043571,GO:0004520,GO:0005575;gbkey=CDS;gene=cas9;go_component=cellular_component|0005575||IEA;go_function=DNA endonuclease activity|0004520||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737004.1;locus_tag=SNF32_12580;product=type II CRISPR RNA-guided endonuclease Cas9;pseudo=true;transl_table=11 JAXGFV010000036.1 Genbank pseudogene 17695 17822 . + . ID=gene-SNF32_12585;Name=SNF32_12585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12585;pseudo=true JAXGFV010000036.1 Protein Homology CDS 17695 17822 . + 0 ID=cds-SNF32_12585;Parent=gene-SNF32_12585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724379.1;locus_tag=SNF32_12585;product=methanol dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000036.1 Genbank pseudogene 17888 19569 . + . ID=gene-SNF32_12590;Name=SNF32_12590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12590;pseudo=true JAXGFV010000036.1 Protein Homology CDS 17888 19569 . + 0 ID=cds-SNF32_12590;Parent=gene-SNF32_12590;Note=frameshifted;Ontology_term=GO:0006631,GO:0050151,GO:0071949;gbkey=CDS;go_function=oleate hydratase activity|0050151||IEA,FAD binding|0071949||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002344632.1;locus_tag=SNF32_12590;product=oleate hydratase;pseudo=true;transl_table=11 JAXGFV010000036.1 Genbank gene 19654 19884 . - . ID=gene-SNF32_12595;Name=SNF32_12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12595 JAXGFV010000036.1 GeneMarkS-2+ CDS 19654 19884 . - 0 ID=cds-MDY4307743.1;Parent=gene-SNF32_12595;Dbxref=NCBI_GP:MDY4307743.1;Name=MDY4307743.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12595;product=hypothetical protein;protein_id=MDY4307743.1;transl_table=11 JAXGFV010000036.1 Genbank gene 19884 20432 . - . ID=gene-SNF32_12600;Name=SNF32_12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12600 JAXGFV010000036.1 GeneMarkS-2+ CDS 19884 20432 . - 0 ID=cds-MDY4307744.1;Parent=gene-SNF32_12600;Dbxref=NCBI_GP:MDY4307744.1;Name=MDY4307744.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12600;product=hypothetical protein;protein_id=MDY4307744.1;transl_table=11 JAXGFV010000036.1 Genbank pseudogene 20741 21869 . + . ID=gene-SNF32_12605;Name=SNF32_12605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12605;pseudo=true JAXGFV010000036.1 Protein Homology CDS 20741 21869 . + 0 ID=cds-SNF32_12605;Parent=gene-SNF32_12605;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736480.1;locus_tag=SNF32_12605;product=alcohol dehydrogenase catalytic domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000036.1 Genbank gene 21897 22265 . + . ID=gene-SNF32_12610;Name=SNF32_12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12610 JAXGFV010000036.1 Protein Homology CDS 21897 22265 . + 0 ID=cds-MDY4307745.1;Parent=gene-SNF32_12610;Dbxref=NCBI_GP:MDY4307745.1;Name=MDY4307745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629521.1;locus_tag=SNF32_12610;product=YrhK family protein;protein_id=MDY4307745.1;transl_table=11 JAXGFV010000036.1 Genbank pseudogene 22244 22701 . - . ID=gene-SNF32_12615;Name=SNF32_12615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12615;pseudo=true JAXGFV010000036.1 Protein Homology CDS 22244 22701 . - 0 ID=cds-SNF32_12615;Parent=gene-SNF32_12615;Note=frameshifted;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736482.1;locus_tag=SNF32_12615;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 JAXGFV010000036.1 Genbank pseudogene 22888 23628 . + . ID=gene-SNF32_12620;Name=SNF32_12620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12620;pseudo=true JAXGFV010000036.1 Protein Homology CDS 22888 23628 . + 0 ID=cds-SNF32_12620;Parent=gene-SNF32_12620;Note=frameshifted;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016250180.1;locus_tag=SNF32_12620;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 JAXGFV010000036.1 Genbank gene 23756 23947 . - . ID=gene-SNF32_12625;Name=SNF32_12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12625 JAXGFV010000036.1 Protein Homology CDS 23756 23947 . - 0 ID=cds-MDY4307746.1;Parent=gene-SNF32_12625;Dbxref=NCBI_GP:MDY4307746.1;Name=MDY4307746.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016152.3;locus_tag=SNF32_12625;product=MmcQ/YjbR family DNA-binding protein;protein_id=MDY4307746.1;transl_table=11 JAXGFV010000036.1 Genbank pseudogene 24285 25078 . - . ID=gene-SNF32_12630;Name=SNF32_12630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12630;pseudo=true JAXGFV010000036.1 Protein Homology CDS 24285 25078 . - 1 ID=cds-SNF32_12630;Parent=gene-SNF32_12630;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016628205.1;locus_tag=SNF32_12630;product=PTS transporter subunit EIIC;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000037.1 1 24533 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000037.1 Genbank region 1 24533 . + . ID=JAXGFV010000037.1:1..24533;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000037.1 Genbank pseudogene 19 658 . - . ID=gene-SNF32_12635;Name=SNF32_12635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12635;pseudo=true JAXGFV010000037.1 Protein Homology CDS 19 658 . - 0 ID=cds-SNF32_12635;Parent=gene-SNF32_12635;Note=frameshifted;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010749434.1;locus_tag=SNF32_12635;product=copper homeostasis protein CutC;pseudo=true;transl_table=11 JAXGFV010000037.1 Genbank pseudogene 851 1707 . + . ID=gene-SNF32_12640;Name=SNF32_12640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12640;pseudo=true JAXGFV010000037.1 Protein Homology CDS 851 1707 . + 0 ID=cds-SNF32_12640;Parent=gene-SNF32_12640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734262.1;locus_tag=SNF32_12640;product=methyltransferase domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000037.1 Genbank gene 1935 2438 . + . ID=gene-SNF32_12645;Name=SNF32_12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12645 JAXGFV010000037.1 Protein Homology CDS 1935 2438 . + 0 ID=cds-MDY4307747.1;Parent=gene-SNF32_12645;Dbxref=NCBI_GP:MDY4307747.1;Name=MDY4307747.1;Ontology_term=GO:0003723,GO:0008175;gbkey=CDS;go_function=RNA binding|0003723||IEA,tRNA methyltransferase activity|0008175||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734263.1;locus_tag=SNF32_12645;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=MDY4307747.1;transl_table=11 JAXGFV010000037.1 Genbank gene 2764 3387 . + . ID=gene-SNF32_12650;Name=SNF32_12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12650 JAXGFV010000037.1 Protein Homology CDS 2764 3387 . + 0 ID=cds-MDY4307748.1;Parent=gene-SNF32_12650;Dbxref=NCBI_GP:MDY4307748.1;Name=MDY4307748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002307095.1;locus_tag=SNF32_12650;product=histidine phosphatase family protein;protein_id=MDY4307748.1;transl_table=11 JAXGFV010000037.1 Genbank pseudogene 3435 5974 . + . ID=gene-SNF32_12655;Name=SNF32_12655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12655;pseudo=true JAXGFV010000037.1 Protein Homology CDS 3435 5974 . + 0 ID=cds-SNF32_12655;Parent=gene-SNF32_12655;Note=frameshifted;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005879003.1;locus_tag=SNF32_12655;product=ATP-dependent RecD-like DNA helicase;pseudo=true;transl_table=11 JAXGFV010000037.1 Genbank pseudogene 6122 7094 . - . ID=gene-SNF32_12660;Name=SNF32_12660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12660;pseudo=true JAXGFV010000037.1 Protein Homology CDS 6122 7094 . - 0 ID=cds-SNF32_12660;Parent=gene-SNF32_12660;Note=frameshifted;Ontology_term=GO:0008150,GO:0001727,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=lipid kinase activity|0001727||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010752979.1;locus_tag=SNF32_12660;product=YegS/Rv2252/BmrU family lipid kinase;pseudo=true;transl_table=11 JAXGFV010000037.1 Genbank gene 7794 8297 . + . ID=gene-SNF32_12665;Name=SNF32_12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12665 JAXGFV010000037.1 Protein Homology CDS 7794 8297 . + 0 ID=cds-MDY4307749.1;Parent=gene-SNF32_12665;Dbxref=NCBI_GP:MDY4307749.1;Name=MDY4307749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002318553.1;locus_tag=SNF32_12665;product=QueT transporter family protein;protein_id=MDY4307749.1;transl_table=11 JAXGFV010000037.1 Genbank pseudogene 8419 9061 . - . ID=gene-SNF32_12670;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=pseudogene;locus_tag=SNF32_12670;pseudo=true JAXGFV010000037.1 Protein Homology CDS 8419 9061 . - 0 ID=cds-SNF32_12670;Parent=gene-SNF32_12670;Note=frameshifted;gbkey=CDS;gene=cbpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734268.1;locus_tag=SNF32_12670;product=cyclic di-AMP binding protein CbpA;pseudo=true;transl_table=11 JAXGFV010000037.1 Genbank gene 9220 9372 . + . ID=gene-SNF32_12675;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=SNF32_12675 JAXGFV010000037.1 Protein Homology CDS 9220 9372 . + 0 ID=cds-MDY4307750.1;Parent=gene-SNF32_12675;Dbxref=NCBI_GP:MDY4307750.1;Name=MDY4307750.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002294578.1;locus_tag=SNF32_12675;product=50S ribosomal protein L33;protein_id=MDY4307750.1;transl_table=11 JAXGFV010000037.1 Genbank pseudogene 9390 9558 . + . ID=gene-SNF32_12680;Name=secE;gbkey=Gene;gene=secE;gene_biotype=pseudogene;locus_tag=SNF32_12680;pseudo=true JAXGFV010000037.1 Protein Homology CDS 9390 9558 . + 0 ID=cds-SNF32_12680;Parent=gene-SNF32_12680;Note=frameshifted;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722316.1;locus_tag=SNF32_12680;product=preprotein translocase subunit SecE;pseudo=true;transl_table=11 JAXGFV010000037.1 Genbank pseudogene 9765 9932 . + . ID=gene-SNF32_12685;Name=SNF32_12685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12685;pseudo=true JAXGFV010000037.1 Protein Homology CDS 9765 9932 . + 0 ID=cds-SNF32_12685;Parent=gene-SNF32_12685;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013540.3;locus_tag=SNF32_12685;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000037.1 Genbank gene 10696 10857 . - . ID=gene-SNF32_12690;Name=SNF32_12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12690 JAXGFV010000037.1 Protein Homology CDS 10696 10857 . - 0 ID=cds-MDY4307751.1;Parent=gene-SNF32_12690;Dbxref=NCBI_GP:MDY4307751.1;Name=MDY4307751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734271.1;locus_tag=SNF32_12690;product=hypothetical protein;protein_id=MDY4307751.1;transl_table=11 JAXGFV010000037.1 Genbank pseudogene 11239 11769 . + . ID=gene-SNF32_12695;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=pseudogene;locus_tag=SNF32_12695;pseudo=true JAXGFV010000037.1 Protein Homology CDS 11239 11769 . + 0 ID=cds-SNF32_12695;Parent=gene-SNF32_12695;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002294580.1;locus_tag=SNF32_12695;product=transcription termination/antitermination protein NusG;pseudo=true;transl_table=11 JAXGFV010000037.1 Genbank gene 11894 12739 . + . ID=gene-SNF32_12700;Name=SNF32_12700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12700 JAXGFV010000037.1 Protein Homology CDS 11894 12739 . + 0 ID=cds-MDY4307752.1;Parent=gene-SNF32_12700;Dbxref=NCBI_GP:MDY4307752.1;Name=MDY4307752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722313.1;locus_tag=SNF32_12700;product=alpha/beta hydrolase;protein_id=MDY4307752.1;transl_table=11 JAXGFV010000037.1 Genbank pseudogene 13079 13914 . + . ID=gene-SNF32_12705;Name=SNF32_12705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12705;pseudo=true JAXGFV010000037.1 Protein Homology CDS 13079 13914 . + 0 ID=cds-SNF32_12705;Parent=gene-SNF32_12705;Note=frameshifted;Ontology_term=GO:0055085,GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002396075.1;locus_tag=SNF32_12705;product=ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000037.1 Genbank pseudogene 13907 14682 . + . ID=gene-SNF32_12710;Name=SNF32_12710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12710;pseudo=true JAXGFV010000037.1 Protein Homology CDS 13907 14682 . + 0 ID=cds-SNF32_12710;Parent=gene-SNF32_12710;Note=frameshifted;Ontology_term=GO:0055085,GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010763770.1;locus_tag=SNF32_12710;product=ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000037.1 Genbank gene 14744 15784 . + . ID=gene-SNF32_12715;Name=SNF32_12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12715 JAXGFV010000037.1 Protein Homology CDS 14744 15784 . + 0 ID=cds-MDY4307753.1;Parent=gene-SNF32_12715;Dbxref=NCBI_GP:MDY4307753.1;Name=MDY4307753.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734276.1;locus_tag=SNF32_12715;product=ABC transporter ATP-binding protein;protein_id=MDY4307753.1;transl_table=11 JAXGFV010000037.1 Genbank pseudogene 15848 16865 . + . ID=gene-SNF32_12720;Name=SNF32_12720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12720;pseudo=true JAXGFV010000037.1 Protein Homology CDS 15848 16865 . + 0 ID=cds-SNF32_12720;Parent=gene-SNF32_12720;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010763772.1;locus_tag=SNF32_12720;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 JAXGFV010000037.1 Genbank pseudogene 16974 18697 . + . ID=gene-SNF32_12725;Name=SNF32_12725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12725;pseudo=true JAXGFV010000037.1 Protein Homology CDS 16974 18697 . + 0 ID=cds-SNF32_12725;Parent=gene-SNF32_12725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722305.1;locus_tag=SNF32_12725;product=adenine deaminase C-terminal domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000037.1 Genbank gene 18694 20004 . + . ID=gene-SNF32_12730;Name=SNF32_12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12730 JAXGFV010000037.1 Protein Homology CDS 18694 20004 . + 0 ID=cds-MDY4307754.1;Parent=gene-SNF32_12730;Dbxref=NCBI_GP:MDY4307754.1;Name=MDY4307754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734279.1;locus_tag=SNF32_12730;product=amidohydrolase;protein_id=MDY4307754.1;transl_table=11 JAXGFV010000037.1 Genbank gene 20118 20990 . - . ID=gene-SNF32_12735;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=protein_coding;locus_tag=SNF32_12735 JAXGFV010000037.1 Protein Homology CDS 20118 20990 . - 0 ID=cds-MDY4307755.1;Parent=gene-SNF32_12735;Dbxref=NCBI_GP:MDY4307755.1;Name=MDY4307755.1;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002307112.1;locus_tag=SNF32_12735;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;protein_id=MDY4307755.1;transl_table=11 JAXGFV010000037.1 Genbank pseudogene 21006 21671 . - . ID=gene-SNF32_12740;Name=sdaAB;gbkey=Gene;gene=sdaAB;gene_biotype=pseudogene;locus_tag=SNF32_12740;pseudo=true JAXGFV010000037.1 Protein Homology CDS 21006 21671 . - 0 ID=cds-SNF32_12740;Parent=gene-SNF32_12740;Note=frameshifted;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAB;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002299351.1;locus_tag=SNF32_12740;product=L-serine ammonia-lyase%2C iron-sulfur-dependent subunit beta;pseudo=true;transl_table=11 JAXGFV010000037.1 Genbank gene 21984 22412 . + . ID=gene-SNF32_12745;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=SNF32_12745 JAXGFV010000037.1 Protein Homology CDS 21984 22412 . + 0 ID=cds-MDY4307756.1;Parent=gene-SNF32_12745;Dbxref=NCBI_GP:MDY4307756.1;Name=MDY4307756.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002356424.1;locus_tag=SNF32_12745;product=50S ribosomal protein L11;protein_id=MDY4307756.1;transl_table=11 JAXGFV010000037.1 Genbank pseudogene 22514 23201 . + . ID=gene-SNF32_12750;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=pseudogene;locus_tag=SNF32_12750;pseudo=true JAXGFV010000037.1 Protein Homology CDS 22514 23201 . + 0 ID=cds-SNF32_12750;Parent=gene-SNF32_12750;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003127078.1;locus_tag=SNF32_12750;product=50S ribosomal protein L1;pseudo=true;transl_table=11 JAXGFV010000037.1 cmsearch sequence_feature 23281 23406 . + . ID=id-JAXGFV010000037.1:23281..23406;Dbxref=RFAM:RF00557;Note=ribosomal protein L10 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.4 JAXGFV010000037.1 Genbank pseudogene 23576 24078 . + . ID=gene-SNF32_12755;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=pseudogene;locus_tag=SNF32_12755;pseudo=true JAXGFV010000037.1 Protein Homology CDS 23576 24078 . + 0 ID=cds-SNF32_12755;Parent=gene-SNF32_12755;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002345549.1;locus_tag=SNF32_12755;product=50S ribosomal protein L10;pseudo=true;transl_table=11 JAXGFV010000037.1 Genbank gene 24136 24504 . + . ID=gene-SNF32_12760;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=SNF32_12760 JAXGFV010000037.1 Protein Homology CDS 24136 24504 . + 0 ID=cds-MDY4307757.1;Parent=gene-SNF32_12760;Dbxref=NCBI_GP:MDY4307757.1;Name=MDY4307757.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003127081.1;locus_tag=SNF32_12760;product=50S ribosomal protein L7/L12;protein_id=MDY4307757.1;transl_table=11 ##sequence-region JAXGFV010000038.1 1 24013 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000038.1 Genbank region 1 24013 . + . ID=JAXGFV010000038.1:1..24013;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000038.1 Genbank pseudogene 1 368 . - . ID=gene-SNF32_12765;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=pseudogene;locus_tag=SNF32_12765;pseudo=true JAXGFV010000038.1 Protein Homology CDS 1 368 . - 0 ID=cds-SNF32_12765;Parent=gene-SNF32_12765;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006364,GO:0043822;gbkey=CDS;gene=rnmV;go_function=ribonuclease M5 activity|0043822||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002310144.1;locus_tag=SNF32_12765;product=ribonuclease M5;pseudo=true;transl_table=11 JAXGFV010000038.1 Genbank gene 361 1137 . - . ID=gene-SNF32_12770;Name=SNF32_12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12770 JAXGFV010000038.1 Protein Homology CDS 361 1137 . - 0 ID=cds-MDY4307758.1;Parent=gene-SNF32_12770;Dbxref=NCBI_GP:MDY4307758.1;Name=MDY4307758.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005880255.1;locus_tag=SNF32_12770;product=TatD family hydrolase;protein_id=MDY4307758.1;transl_table=11 JAXGFV010000038.1 Genbank pseudogene 1269 2592 . - . ID=gene-SNF32_12775;Name=SNF32_12775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12775;pseudo=true JAXGFV010000038.1 Protein Homology CDS 1269 2592 . - 0 ID=cds-SNF32_12775;Parent=gene-SNF32_12775;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016625786.1;locus_tag=SNF32_12775;product=amino acid permease;pseudo=true;transl_table=11 JAXGFV010000038.1 Genbank pseudogene 2759 3329 . + . ID=gene-SNF32_12780;Name=SNF32_12780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12780;pseudo=true JAXGFV010000038.1 Protein Homology CDS 2759 3329 . + 0 ID=cds-SNF32_12780;Parent=gene-SNF32_12780;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002345520.1;locus_tag=SNF32_12780;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000038.1 Genbank gene 3416 3640 . - . ID=gene-SNF32_12785;Name=SNF32_12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12785 JAXGFV010000038.1 GeneMarkS-2+ CDS 3416 3640 . - 0 ID=cds-MDY4307759.1;Parent=gene-SNF32_12785;Dbxref=NCBI_GP:MDY4307759.1;Name=MDY4307759.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12785;product=Fic family protein;protein_id=MDY4307759.1;transl_table=11 JAXGFV010000038.1 Genbank gene 3705 4070 . - . ID=gene-SNF32_12790;Name=SNF32_12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12790 JAXGFV010000038.1 GeneMarkS-2+ CDS 3705 4070 . - 0 ID=cds-MDY4307760.1;Parent=gene-SNF32_12790;Dbxref=NCBI_GP:MDY4307760.1;Name=MDY4307760.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12790;product=hypothetical protein;protein_id=MDY4307760.1;transl_table=11 JAXGFV010000038.1 Genbank pseudogene 4485 6487 . - . ID=gene-SNF32_12795;Name=metG;gbkey=Gene;gene=metG;gene_biotype=pseudogene;locus_tag=SNF32_12795;pseudo=true JAXGFV010000038.1 Protein Homology CDS 4485 6487 . - 0 ID=cds-SNF32_12795;Parent=gene-SNF32_12795;Note=frameshifted;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016181126.1;locus_tag=SNF32_12795;product=methionine--tRNA ligase;pseudo=true;transl_table=11 JAXGFV010000038.1 Genbank pseudogene 6783 7057 . + . ID=gene-SNF32_12800;Name=SNF32_12800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12800;pseudo=true JAXGFV010000038.1 Protein Homology CDS 6783 7057 . + 0 ID=cds-SNF32_12800;Parent=gene-SNF32_12800;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016172915.1;locus_tag=SNF32_12800;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000038.1 Genbank pseudogene 7165 7948 . + . ID=gene-SNF32_12805;Name=SNF32_12805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12805;pseudo=true JAXGFV010000038.1 Protein Homology CDS 7165 7948 . + 0 ID=cds-SNF32_12805;Parent=gene-SNF32_12805;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016853214.1;locus_tag=SNF32_12805;product=NUDIX hydrolase;pseudo=true;transl_table=11 JAXGFV010000038.1 Genbank pseudogene 8073 8524 . - . ID=gene-SNF32_12810;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=SNF32_12810;pseudo=true JAXGFV010000038.1 Protein Homology CDS 8073 8524 . - 0 ID=cds-SNF32_12810;Parent=gene-SNF32_12810;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002334252.1;locus_tag=SNF32_12810;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 JAXGFV010000038.1 Genbank gene 9744 10067 . - . ID=gene-SNF32_12815;Name=SNF32_12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12815 JAXGFV010000038.1 GeneMarkS-2+ CDS 9744 10067 . - 0 ID=cds-MDY4307761.1;Parent=gene-SNF32_12815;Dbxref=NCBI_GP:MDY4307761.1;Name=MDY4307761.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12815;product=hypothetical protein;protein_id=MDY4307761.1;transl_table=11 JAXGFV010000038.1 Genbank gene 10025 10918 . - . ID=gene-SNF32_12820;Name=SNF32_12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12820 JAXGFV010000038.1 GeneMarkS-2+ CDS 10025 10918 . - 0 ID=cds-MDY4307762.1;Parent=gene-SNF32_12820;Dbxref=NCBI_GP:MDY4307762.1;Name=MDY4307762.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12820;product=hypothetical protein;protein_id=MDY4307762.1;transl_table=11 JAXGFV010000038.1 Genbank gene 11076 12386 . - . ID=gene-SNF32_12825;Name=SNF32_12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12825 JAXGFV010000038.1 GeneMarkS-2+ CDS 11076 12386 . - 0 ID=cds-MDY4307763.1;Parent=gene-SNF32_12825;Dbxref=NCBI_GP:MDY4307763.1;Name=MDY4307763.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12825;product=hypothetical protein;protein_id=MDY4307763.1;transl_table=11 JAXGFV010000038.1 Genbank gene 12311 12946 . - . ID=gene-SNF32_12830;Name=SNF32_12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12830 JAXGFV010000038.1 GeneMarkS-2+ CDS 12311 12946 . - 0 ID=cds-MDY4307764.1;Parent=gene-SNF32_12830;Dbxref=NCBI_GP:MDY4307764.1;Name=MDY4307764.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12830;product=hypothetical protein;protein_id=MDY4307764.1;transl_table=11 JAXGFV010000038.1 Genbank gene 12925 13740 . - . ID=gene-SNF32_12835;Name=SNF32_12835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12835 JAXGFV010000038.1 GeneMarkS-2+ CDS 12925 13740 . - 0 ID=cds-MDY4307765.1;Parent=gene-SNF32_12835;Dbxref=NCBI_GP:MDY4307765.1;Name=MDY4307765.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12835;product=hypothetical protein;protein_id=MDY4307765.1;transl_table=11 JAXGFV010000038.1 Genbank gene 13700 14119 . - . ID=gene-SNF32_12840;Name=SNF32_12840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12840 JAXGFV010000038.1 GeneMarkS-2+ CDS 13700 14119 . - 0 ID=cds-MDY4307766.1;Parent=gene-SNF32_12840;Dbxref=NCBI_GP:MDY4307766.1;Name=MDY4307766.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12840;product=hypothetical protein;protein_id=MDY4307766.1;transl_table=11 JAXGFV010000038.1 Genbank gene 14244 14573 . - . ID=gene-SNF32_12845;Name=SNF32_12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12845 JAXGFV010000038.1 GeneMarkS-2+ CDS 14244 14573 . - 0 ID=cds-MDY4307767.1;Parent=gene-SNF32_12845;Dbxref=NCBI_GP:MDY4307767.1;Name=MDY4307767.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12845;product=hypothetical protein;protein_id=MDY4307767.1;transl_table=11 JAXGFV010000038.1 Genbank gene 14570 15370 . - . ID=gene-SNF32_12850;Name=SNF32_12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12850 JAXGFV010000038.1 GeneMarkS-2+ CDS 14570 15370 . - 0 ID=cds-MDY4307768.1;Parent=gene-SNF32_12850;Dbxref=NCBI_GP:MDY4307768.1;Name=MDY4307768.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12850;product=hypothetical protein;protein_id=MDY4307768.1;transl_table=11 JAXGFV010000038.1 Genbank pseudogene 15925 16427 . + . ID=gene-SNF32_12855;Name=SNF32_12855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12855;pseudo=true JAXGFV010000038.1 Protein Homology CDS 15925 16427 . + 0 ID=cds-SNF32_12855;Parent=gene-SNF32_12855;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002297185.1;locus_tag=SNF32_12855;product=transposase;pseudo=true;transl_table=11 JAXGFV010000038.1 Genbank pseudogene 16732 17736 . - . ID=gene-SNF32_12860;Name=SNF32_12860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12860;pseudo=true JAXGFV010000038.1 Protein Homology CDS 16732 17736 . - 0 ID=cds-SNF32_12860;Parent=gene-SNF32_12860;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736150.1;locus_tag=SNF32_12860;product=RNA-guided endonuclease TnpB family protein;pseudo=true;transl_table=11 JAXGFV010000038.1 Genbank pseudogene 17749 18707 . - . ID=gene-SNF32_12865;Name=SNF32_12865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12865;pseudo=true JAXGFV010000038.1 Protein Homology CDS 17749 18707 . - 0 ID=cds-SNF32_12865;Parent=gene-SNF32_12865;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005880230.1;locus_tag=SNF32_12865;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000038.1 Genbank pseudogene 18693 19751 . - . ID=gene-SNF32_12870;Name=SNF32_12870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12870;pseudo=true JAXGFV010000038.1 Protein Homology CDS 18693 19751 . - 0 ID=cds-SNF32_12870;Parent=gene-SNF32_12870;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002336675.1;locus_tag=SNF32_12870;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000038.1 Genbank pseudogene 19757 20799 . - . ID=gene-SNF32_12875;Name=SNF32_12875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12875;pseudo=true JAXGFV010000038.1 Protein Homology CDS 19757 20799 . - 0 ID=cds-SNF32_12875;Parent=gene-SNF32_12875;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002345521.1;locus_tag=SNF32_12875;product=ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000038.1 Genbank pseudogene 20800 21740 . - . ID=gene-SNF32_12880;Name=opp3b;gbkey=Gene;gene=opp3b;gene_biotype=pseudogene;locus_tag=SNF32_12880;pseudo=true JAXGFV010000038.1 Protein Homology CDS 20800 21740 . - 0 ID=cds-SNF32_12880;Parent=gene-SNF32_12880;Note=frameshifted;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp3b;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722500.1;locus_tag=SNF32_12880;product=oligopeptide ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000038.1 Genbank gene 21802 22164 . + . ID=gene-SNF32_12885;Name=SNF32_12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12885 JAXGFV010000038.1 Protein Homology CDS 21802 22164 . + 0 ID=cds-MDY4307769.1;Parent=gene-SNF32_12885;Dbxref=NCBI_GP:MDY4307769.1;Name=MDY4307769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002321599.1;locus_tag=SNF32_12885;product=DUF3899 domain-containing protein;protein_id=MDY4307769.1;transl_table=11 JAXGFV010000038.1 Genbank gene 22256 23923 . - . ID=gene-SNF32_12890;Name=SNF32_12890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12890 JAXGFV010000038.1 Protein Homology CDS 22256 23923 . - 0 ID=cds-MDY4307770.1;Parent=gene-SNF32_12890;Dbxref=NCBI_GP:MDY4307770.1;Name=MDY4307770.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002335196.1;locus_tag=SNF32_12890;product=peptide ABC transporter substrate-binding protein;protein_id=MDY4307770.1;transl_table=11 ##sequence-region JAXGFV010000039.1 1 23931 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000039.1 Genbank region 1 23931 . + . ID=JAXGFV010000039.1:1..23931;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000039.1 Genbank gene 129 1070 . + . ID=gene-SNF32_12895;Name=SNF32_12895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12895 JAXGFV010000039.1 Protein Homology CDS 129 1070 . + 0 ID=cds-MDY4307771.1;Parent=gene-SNF32_12895;Dbxref=NCBI_GP:MDY4307771.1;Name=MDY4307771.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002376359.1;locus_tag=SNF32_12895;product=ABC transporter ATP-binding protein;protein_id=MDY4307771.1;transl_table=11 JAXGFV010000039.1 Genbank pseudogene 1063 1831 . + . ID=gene-SNF32_12900;Name=SNF32_12900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12900;pseudo=true JAXGFV010000039.1 Protein Homology CDS 1063 1831 . + 0 ID=cds-SNF32_12900;Parent=gene-SNF32_12900;Note=frameshifted;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002354811.1;locus_tag=SNF32_12900;product=ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000039.1 Genbank pseudogene 2216 3178 . + . ID=gene-SNF32_12905;Name=SNF32_12905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12905;pseudo=true JAXGFV010000039.1 Protein Homology CDS 2216 3178 . + 0 ID=cds-SNF32_12905;Parent=gene-SNF32_12905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734032.1;locus_tag=SNF32_12905;product=tRNA-dihydrouridine synthase;pseudo=true;transl_table=11 JAXGFV010000039.1 Genbank pseudogene 3524 5000 . + . ID=gene-SNF32_12910;Name=crtI;gbkey=Gene;gene=crtI;gene_biotype=pseudogene;locus_tag=SNF32_12910;pseudo=true JAXGFV010000039.1 Protein Homology CDS 3524 5000 . + 0 ID=cds-SNF32_12910;Parent=gene-SNF32_12910;Note=frameshifted;Ontology_term=GO:0016117,GO:0016166;gbkey=CDS;gene=crtI;go_function=phytoene dehydrogenase activity|0016166||IEA;go_process=carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722718.1;locus_tag=SNF32_12910;product=phytoene desaturase family protein;pseudo=true;transl_table=11 JAXGFV010000039.1 Genbank pseudogene 4987 5842 . + . ID=gene-SNF32_12915;Name=SNF32_12915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_12915;pseudo=true JAXGFV010000039.1 Protein Homology CDS 4987 5842 . + 0 ID=cds-SNF32_12915;Parent=gene-SNF32_12915;Note=frameshifted;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737250.1;locus_tag=SNF32_12915;product=phytoene/squalene synthase family protein;pseudo=true;transl_table=11 JAXGFV010000039.1 Genbank gene 6242 6391 . + . ID=gene-SNF32_12920;Name=SNF32_12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12920 JAXGFV010000039.1 GeneMarkS-2+ CDS 6242 6391 . + 0 ID=cds-MDY4307772.1;Parent=gene-SNF32_12920;Dbxref=NCBI_GP:MDY4307772.1;Name=MDY4307772.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12920;product=hypothetical protein;protein_id=MDY4307772.1;transl_table=11 JAXGFV010000039.1 Genbank gene 6417 6653 . + . ID=gene-SNF32_12925;Name=SNF32_12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12925 JAXGFV010000039.1 GeneMarkS-2+ CDS 6417 6653 . + 0 ID=cds-MDY4307773.1;Parent=gene-SNF32_12925;Dbxref=NCBI_GP:MDY4307773.1;Name=MDY4307773.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12925;product=hypothetical protein;protein_id=MDY4307773.1;transl_table=11 JAXGFV010000039.1 Genbank gene 6653 7222 . + . ID=gene-SNF32_12930;Name=SNF32_12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12930 JAXGFV010000039.1 Protein Homology CDS 6653 7222 . + 0 ID=cds-MDY4307774.1;Parent=gene-SNF32_12930;Dbxref=NCBI_GP:MDY4307774.1;Name=MDY4307774.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01716.1;locus_tag=SNF32_12930;product=hypothetical protein;protein_id=MDY4307774.1;transl_table=11 JAXGFV010000039.1 Genbank gene 7269 7562 . + . ID=gene-SNF32_12935;Name=SNF32_12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12935 JAXGFV010000039.1 Protein Homology CDS 7269 7562 . + 0 ID=cds-MDY4307775.1;Parent=gene-SNF32_12935;Dbxref=NCBI_GP:MDY4307775.1;Name=MDY4307775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722716.1;locus_tag=SNF32_12935;product=WXG100 family type VII secretion target;protein_id=MDY4307775.1;transl_table=11 JAXGFV010000039.1 Genbank pseudogene 7814 11193 . + . ID=gene-SNF32_12940;Name=esaA;gbkey=Gene;gene=esaA;gene_biotype=pseudogene;locus_tag=SNF32_12940;pseudo=true JAXGFV010000039.1 Protein Homology CDS 7814 11193 . + 0 ID=cds-SNF32_12940;Parent=gene-SNF32_12940;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;gene=esaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002335273.1;locus_tag=SNF32_12940;product=type VII secretion protein EsaA;pseudo=true;transl_table=11 JAXGFV010000039.1 Genbank gene 11239 11691 . + . ID=gene-SNF32_12945;Name=SNF32_12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12945 JAXGFV010000039.1 Protein Homology CDS 11239 11691 . + 0 ID=cds-MDY4307776.1;Parent=gene-SNF32_12945;Dbxref=NCBI_GP:MDY4307776.1;Name=MDY4307776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724357.1;locus_tag=SNF32_12945;product=hypothetical protein;protein_id=MDY4307776.1;transl_table=11 JAXGFV010000039.1 Genbank gene 11705 11980 . + . ID=gene-SNF32_12950;Name=SNF32_12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12950 JAXGFV010000039.1 Protein Homology CDS 11705 11980 . + 0 ID=cds-MDY4307777.1;Parent=gene-SNF32_12950;Dbxref=NCBI_GP:MDY4307777.1;Name=MDY4307777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734040.1;locus_tag=SNF32_12950;product=type VII secretion protein%2C YukD family;protein_id=MDY4307777.1;transl_table=11 JAXGFV010000039.1 Genbank pseudogene 11977 13147 . + . ID=gene-SNF32_12955;Name=essB;gbkey=Gene;gene=essB;gene_biotype=pseudogene;locus_tag=SNF32_12955;pseudo=true JAXGFV010000039.1 Protein Homology CDS 11977 13147 . + 0 ID=cds-SNF32_12955;Parent=gene-SNF32_12955;Note=frameshifted;Ontology_term=GO:0009306,GO:0003674;gbkey=CDS;gene=essB;go_function=molecular_function|0003674||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016853179.1;locus_tag=SNF32_12955;product=type VII secretion protein EssB;pseudo=true;transl_table=11 JAXGFV010000039.1 Genbank gene 13357 13980 . + . ID=gene-SNF32_12960;Name=SNF32_12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12960 JAXGFV010000039.1 GeneMarkS-2+ CDS 13357 13980 . + 0 ID=cds-MDY4307778.1;Parent=gene-SNF32_12960;Dbxref=NCBI_GP:MDY4307778.1;Name=MDY4307778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12960;product=hypothetical protein;protein_id=MDY4307778.1;transl_table=11 JAXGFV010000039.1 Genbank gene 14065 14667 . + . ID=gene-SNF32_12965;Name=SNF32_12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12965 JAXGFV010000039.1 GeneMarkS-2+ CDS 14065 14667 . + 0 ID=cds-MDY4307779.1;Parent=gene-SNF32_12965;Dbxref=NCBI_GP:MDY4307779.1;Name=MDY4307779.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12965;product=hypothetical protein;protein_id=MDY4307779.1;transl_table=11 JAXGFV010000039.1 Genbank gene 14649 15059 . + . ID=gene-SNF32_12970;Name=SNF32_12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12970 JAXGFV010000039.1 GeneMarkS-2+ CDS 14649 15059 . + 0 ID=cds-MDY4307780.1;Parent=gene-SNF32_12970;Dbxref=NCBI_GP:MDY4307780.1;Name=MDY4307780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12970;product=hypothetical protein;protein_id=MDY4307780.1;transl_table=11 JAXGFV010000039.1 Genbank gene 15038 16021 . + . ID=gene-SNF32_12975;Name=SNF32_12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12975 JAXGFV010000039.1 Protein Homology CDS 15038 16021 . + 0 ID=cds-MDY4307781.1;Parent=gene-SNF32_12975;Dbxref=NCBI_GP:MDY4307781.1;Name=MDY4307781.1;Ontology_term=GO:0000166,GO:0003677,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF013727.3;locus_tag=SNF32_12975;product=FtsK/SpoIIIE domain-containing protein;protein_id=MDY4307781.1;transl_table=11 JAXGFV010000039.1 Genbank gene 16090 16800 . + . ID=gene-SNF32_12980;Name=SNF32_12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12980 JAXGFV010000039.1 Protein Homology CDS 16090 16800 . + 0 ID=cds-MDY4307782.1;Parent=gene-SNF32_12980;Dbxref=NCBI_GP:MDY4307782.1;Name=MDY4307782.1;Ontology_term=GO:0000166,GO:0003677,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF013727.3;locus_tag=SNF32_12980;product=FtsK/SpoIIIE domain-containing protein;protein_id=MDY4307782.1;transl_table=11 JAXGFV010000039.1 Genbank gene 16845 17537 . + . ID=gene-SNF32_12985;Name=SNF32_12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12985 JAXGFV010000039.1 GeneMarkS-2+ CDS 16845 17537 . + 0 ID=cds-MDY4307783.1;Parent=gene-SNF32_12985;Dbxref=NCBI_GP:MDY4307783.1;Name=MDY4307783.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_12985;product=hypothetical protein;protein_id=MDY4307783.1;transl_table=11 JAXGFV010000039.1 Genbank gene 17534 17935 . + . ID=gene-SNF32_12990;Name=SNF32_12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12990 JAXGFV010000039.1 Protein Homology CDS 17534 17935 . + 0 ID=cds-MDY4307784.1;Parent=gene-SNF32_12990;Dbxref=NCBI_GP:MDY4307784.1;Name=MDY4307784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734043.1;locus_tag=SNF32_12990;product=DUF4176 domain-containing protein;protein_id=MDY4307784.1;transl_table=11 JAXGFV010000039.1 Genbank gene 17947 18201 . + . ID=gene-SNF32_12995;Name=SNF32_12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_12995 JAXGFV010000039.1 Protein Homology CDS 17947 18201 . + 0 ID=cds-MDY4307785.1;Parent=gene-SNF32_12995;Dbxref=NCBI_GP:MDY4307785.1;Name=MDY4307785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734044.1;locus_tag=SNF32_12995;product=hypothetical protein;protein_id=MDY4307785.1;transl_table=11 JAXGFV010000039.1 Genbank gene 18211 18561 . + . ID=gene-SNF32_13000;Name=SNF32_13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13000 JAXGFV010000039.1 Protein Homology CDS 18211 18561 . + 0 ID=cds-MDY4307786.1;Parent=gene-SNF32_13000;Dbxref=NCBI_GP:MDY4307786.1;Name=MDY4307786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734045.1;locus_tag=SNF32_13000;product=hypothetical protein;protein_id=MDY4307786.1;transl_table=11 JAXGFV010000039.1 Genbank gene 18552 18737 . + . ID=gene-SNF32_13005;Name=SNF32_13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13005 JAXGFV010000039.1 GeneMarkS-2+ CDS 18552 18737 . + 0 ID=cds-MDY4307787.1;Parent=gene-SNF32_13005;Dbxref=NCBI_GP:MDY4307787.1;Name=MDY4307787.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13005;product=hypothetical protein;protein_id=MDY4307787.1;transl_table=11 JAXGFV010000039.1 Genbank gene 18734 19741 . + . ID=gene-SNF32_13010;Name=SNF32_13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13010 JAXGFV010000039.1 GeneMarkS-2+ CDS 18734 19741 . + 0 ID=cds-MDY4307788.1;Parent=gene-SNF32_13010;Dbxref=NCBI_GP:MDY4307788.1;Name=MDY4307788.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13010;product=hypothetical protein;protein_id=MDY4307788.1;transl_table=11 JAXGFV010000039.1 Genbank gene 19759 19965 . + . ID=gene-SNF32_13015;Name=SNF32_13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13015 JAXGFV010000039.1 GeneMarkS-2+ CDS 19759 19965 . + 0 ID=cds-MDY4307789.1;Parent=gene-SNF32_13015;Dbxref=NCBI_GP:MDY4307789.1;Name=MDY4307789.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13015;product=hypothetical protein;protein_id=MDY4307789.1;transl_table=11 JAXGFV010000039.1 Genbank gene 20698 20967 . + . ID=gene-SNF32_13020;Name=SNF32_13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13020 JAXGFV010000039.1 GeneMarkS-2+ CDS 20698 20967 . + 0 ID=cds-MDY4307790.1;Parent=gene-SNF32_13020;Dbxref=NCBI_GP:MDY4307790.1;Name=MDY4307790.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13020;product=hypothetical protein;protein_id=MDY4307790.1;transl_table=11 JAXGFV010000039.1 Genbank gene 21494 21856 . + . ID=gene-SNF32_13025;Name=SNF32_13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13025 JAXGFV010000039.1 Protein Homology CDS 21494 21856 . + 0 ID=cds-MDY4307791.1;Parent=gene-SNF32_13025;Dbxref=NCBI_GP:MDY4307791.1;Name=MDY4307791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734654.1;locus_tag=SNF32_13025;product=hypothetical protein;protein_id=MDY4307791.1;transl_table=11 JAXGFV010000039.1 Genbank pseudogene 21849 22177 . + . ID=gene-SNF32_13030;Name=SNF32_13030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13030;pseudo=true JAXGFV010000039.1 Protein Homology CDS 21849 22177 . + 0 ID=cds-SNF32_13030;Parent=gene-SNF32_13030;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723025.1;locus_tag=SNF32_13030;product=DUF4176 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000039.1 Genbank gene 22348 22680 . - . ID=gene-SNF32_13035;Name=SNF32_13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13035 JAXGFV010000039.1 GeneMarkS-2+ CDS 22348 22680 . - 0 ID=cds-MDY4307792.1;Parent=gene-SNF32_13035;Dbxref=NCBI_GP:MDY4307792.1;Name=MDY4307792.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13035;product=hypothetical protein;protein_id=MDY4307792.1;transl_table=11 JAXGFV010000039.1 Genbank gene 22844 23380 . - . ID=gene-SNF32_13040;Name=SNF32_13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13040 JAXGFV010000039.1 GeneMarkS-2+ CDS 22844 23380 . - 0 ID=cds-MDY4307793.1;Parent=gene-SNF32_13040;Dbxref=NCBI_GP:MDY4307793.1;Name=MDY4307793.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13040;product=hypothetical protein;protein_id=MDY4307793.1;transl_table=11 JAXGFV010000039.1 Genbank gene 23380 23931 . - . ID=gene-SNF32_13045;Name=SNF32_13045;end_range=23931,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13045;partial=true JAXGFV010000039.1 GeneMarkS-2+ CDS 23380 23931 . - 0 ID=cds-MDY4307794.1;Parent=gene-SNF32_13045;Dbxref=NCBI_GP:MDY4307794.1;Name=MDY4307794.1;end_range=23931,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13045;partial=true;product=hypothetical protein;protein_id=MDY4307794.1;transl_table=11 ##sequence-region JAXGFV010000004.1 1 123288 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000004.1 Genbank region 1 123288 . + . ID=JAXGFV010000004.1:1..123288;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000004.1 Genbank gene 110 574 . - . ID=gene-SNF32_03160;Name=SNF32_03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03160 JAXGFV010000004.1 Protein Homology CDS 110 574 . - 0 ID=cds-MDY4306769.1;Parent=gene-SNF32_03160;Dbxref=NCBI_GP:MDY4306769.1;Name=MDY4306769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010751207.1;locus_tag=SNF32_03160;product=hypothetical protein;protein_id=MDY4306769.1;transl_table=11 JAXGFV010000004.1 Genbank gene 733 1335 . - . ID=gene-SNF32_03165;Name=SNF32_03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03165 JAXGFV010000004.1 Protein Homology CDS 733 1335 . - 0 ID=cds-MDY4306770.1;Parent=gene-SNF32_03165;Dbxref=NCBI_GP:MDY4306770.1;Name=MDY4306770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723589.1;locus_tag=SNF32_03165;product=hypothetical protein;protein_id=MDY4306770.1;transl_table=11 JAXGFV010000004.1 Genbank gene 1426 1692 . - . ID=gene-SNF32_03170;Name=SNF32_03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03170 JAXGFV010000004.1 GeneMarkS-2+ CDS 1426 1692 . - 0 ID=cds-MDY4306771.1;Parent=gene-SNF32_03170;Dbxref=NCBI_GP:MDY4306771.1;Name=MDY4306771.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03170;product=cell wall protein;protein_id=MDY4306771.1;transl_table=11 JAXGFV010000004.1 Genbank gene 2044 2406 . - . ID=gene-SNF32_03175;Name=SNF32_03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03175 JAXGFV010000004.1 GeneMarkS-2+ CDS 2044 2406 . - 0 ID=cds-MDY4306772.1;Parent=gene-SNF32_03175;Dbxref=NCBI_GP:MDY4306772.1;Name=MDY4306772.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03175;product=hypothetical protein;protein_id=MDY4306772.1;transl_table=11 JAXGFV010000004.1 Genbank gene 2650 3015 . - . ID=gene-SNF32_03180;Name=SNF32_03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03180 JAXGFV010000004.1 GeneMarkS-2+ CDS 2650 3015 . - 0 ID=cds-MDY4306773.1;Parent=gene-SNF32_03180;Dbxref=NCBI_GP:MDY4306773.1;Name=MDY4306773.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03180;product=hypothetical protein;protein_id=MDY4306773.1;transl_table=11 JAXGFV010000004.1 Genbank gene 3015 3227 . - . ID=gene-SNF32_03185;Name=SNF32_03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03185 JAXGFV010000004.1 Protein Homology CDS 3015 3227 . - 0 ID=cds-MDY4306774.1;Parent=gene-SNF32_03185;Dbxref=NCBI_GP:MDY4306774.1;Name=MDY4306774.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016901.3;locus_tag=SNF32_03185;product=helix-turn-helix domain-containing protein;protein_id=MDY4306774.1;transl_table=11 JAXGFV010000004.1 Genbank gene 3212 3511 . - . ID=gene-SNF32_03190;Name=SNF32_03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03190 JAXGFV010000004.1 Protein Homology CDS 3212 3511 . - 0 ID=cds-MDY4306775.1;Parent=gene-SNF32_03190;Dbxref=NCBI_GP:MDY4306775.1;Name=MDY4306775.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019884.3;locus_tag=SNF32_03190;product=helix-turn-helix domain-containing protein;protein_id=MDY4306775.1;transl_table=11 JAXGFV010000004.1 Genbank gene 3839 4522 . - . ID=gene-SNF32_03195;Name=SNF32_03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03195 JAXGFV010000004.1 GeneMarkS-2+ CDS 3839 4522 . - 0 ID=cds-MDY4306776.1;Parent=gene-SNF32_03195;Dbxref=NCBI_GP:MDY4306776.1;Name=MDY4306776.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03195;product=hypothetical protein;protein_id=MDY4306776.1;transl_table=11 JAXGFV010000004.1 Genbank gene 4722 5321 . - . ID=gene-SNF32_03200;Name=SNF32_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03200 JAXGFV010000004.1 Protein Homology CDS 4722 5321 . - 0 ID=cds-MDY4306777.1;Parent=gene-SNF32_03200;Dbxref=NCBI_GP:MDY4306777.1;Name=MDY4306777.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016901.3;locus_tag=SNF32_03200;product=helix-turn-helix domain-containing protein;protein_id=MDY4306777.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 5727 6672 . - . ID=gene-SNF32_03205;Name=SNF32_03205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03205;pseudo=true JAXGFV010000004.1 Protein Homology CDS 5727 6672 . - 0 ID=cds-SNF32_03205;Parent=gene-SNF32_03205;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016609505.1;locus_tag=SNF32_03205;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 6669 8206 . - . ID=gene-SNF32_03210;Name=SNF32_03210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03210;pseudo=true JAXGFV010000004.1 Protein Homology CDS 6669 8206 . - 0 ID=cds-SNF32_03210;Parent=gene-SNF32_03210;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735719.1;locus_tag=SNF32_03210;product=ABC transporter permease/substrate-binding protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank gene 9051 9686 . + . ID=gene-SNF32_03215;Name=SNF32_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03215 JAXGFV010000004.1 Protein Homology CDS 9051 9686 . + 0 ID=cds-MDY4306778.1;Parent=gene-SNF32_03215;Dbxref=NCBI_GP:MDY4306778.1;Name=MDY4306778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016625641.1;locus_tag=SNF32_03215;product=YitT family protein;protein_id=MDY4306778.1;transl_table=11 JAXGFV010000004.1 Genbank gene 9781 10158 . - . ID=gene-SNF32_03220;Name=SNF32_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03220 JAXGFV010000004.1 Protein Homology CDS 9781 10158 . - 0 ID=cds-MDY4306779.1;Parent=gene-SNF32_03220;Dbxref=NCBI_GP:MDY4306779.1;Name=MDY4306779.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024989.3;locus_tag=SNF32_03220;product=zinc-binding dehydrogenase;protein_id=MDY4306779.1;transl_table=11 JAXGFV010000004.1 Genbank gene 10304 10894 . - . ID=gene-SNF32_03225;Name=SNF32_03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03225 JAXGFV010000004.1 GeneMarkS-2+ CDS 10304 10894 . - 0 ID=cds-MDY4306780.1;Parent=gene-SNF32_03225;Dbxref=NCBI_GP:MDY4306780.1;Name=MDY4306780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03225;product=hypothetical protein;protein_id=MDY4306780.1;transl_table=11 JAXGFV010000004.1 Genbank gene 11044 11244 . - . ID=gene-SNF32_03230;Name=SNF32_03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03230 JAXGFV010000004.1 GeneMarkS-2+ CDS 11044 11244 . - 0 ID=cds-MDY4306781.1;Parent=gene-SNF32_03230;Dbxref=NCBI_GP:MDY4306781.1;Name=MDY4306781.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03230;product=hypothetical protein;protein_id=MDY4306781.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 11795 12762 . - . ID=gene-SNF32_03235;Name=SNF32_03235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03235;pseudo=true JAXGFV010000004.1 Protein Homology CDS 11795 12762 . - 0 ID=cds-SNF32_03235;Parent=gene-SNF32_03235;Note=frameshifted;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735724.1;locus_tag=SNF32_03235;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 12918 13676 . - . ID=gene-SNF32_03240;Name=SNF32_03240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03240;pseudo=true JAXGFV010000004.1 Protein Homology CDS 12918 13676 . - 0 ID=cds-SNF32_03240;Parent=gene-SNF32_03240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724128.1;locus_tag=SNF32_03240;product=alpha/beta fold hydrolase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 13685 14070 . - . ID=gene-SNF32_03245;Name=SNF32_03245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03245;pseudo=true JAXGFV010000004.1 Protein Homology CDS 13685 14070 . - 0 ID=cds-SNF32_03245;Parent=gene-SNF32_03245;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724127.1;locus_tag=SNF32_03245;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 14207 14754 . + . ID=gene-SNF32_03250;Name=SNF32_03250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03250;pseudo=true JAXGFV010000004.1 Protein Homology CDS 14207 14754 . + 0 ID=cds-SNF32_03250;Parent=gene-SNF32_03250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735727.1;locus_tag=SNF32_03250;product=DUF2179 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank gene 15662 15823 . - . ID=gene-SNF32_03255;Name=SNF32_03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03255 JAXGFV010000004.1 GeneMarkS-2+ CDS 15662 15823 . - 0 ID=cds-MDY4306782.1;Parent=gene-SNF32_03255;Dbxref=NCBI_GP:MDY4306782.1;Name=MDY4306782.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03255;product=hypothetical protein;protein_id=MDY4306782.1;transl_table=11 JAXGFV010000004.1 Genbank gene 16072 16509 . - . ID=gene-SNF32_03260;Name=SNF32_03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03260 JAXGFV010000004.1 Protein Homology CDS 16072 16509 . - 0 ID=cds-MDY4306783.1;Parent=gene-SNF32_03260;Dbxref=NCBI_GP:MDY4306783.1;Name=MDY4306783.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020399.3;locus_tag=SNF32_03260;product=DUF1803 domain-containing protein;protein_id=MDY4306783.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 16607 17532 . - . ID=gene-SNF32_03265;Name=SNF32_03265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03265;pseudo=true JAXGFV010000004.1 Protein Homology CDS 16607 17532 . - 0 ID=cds-SNF32_03265;Parent=gene-SNF32_03265;Note=frameshifted;Ontology_term=GO:0004427;gbkey=CDS;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002345060.1;locus_tag=SNF32_03265;product=manganese-dependent inorganic pyrophosphatase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank gene 17617 18378 . - . ID=gene-SNF32_03270;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=SNF32_03270 JAXGFV010000004.1 Protein Homology CDS 17617 18378 . - 0 ID=cds-MDY4306784.1;Parent=gene-SNF32_03270;Dbxref=NCBI_GP:MDY4306784.1;Name=MDY4306784.1;Ontology_term=GO:0043365;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002319416.1;locus_tag=SNF32_03270;product=pyruvate formate-lyase-activating protein;protein_id=MDY4306784.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 18576 20806 . - . ID=gene-SNF32_03275;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=pseudogene;locus_tag=SNF32_03275;pseudo=true JAXGFV010000004.1 Protein Homology CDS 18576 20806 . - 0 ID=cds-SNF32_03275;Parent=gene-SNF32_03275;Note=frameshifted;Ontology_term=GO:0006113,GO:0015942,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=fermentation|0006113||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005878172.1;locus_tag=SNF32_03275;product=formate C-acetyltransferase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 21077 23521 . - . ID=gene-SNF32_03280;Name=parC;gbkey=Gene;gene=parC;gene_biotype=pseudogene;locus_tag=SNF32_03280;pseudo=true JAXGFV010000004.1 Protein Homology CDS 21077 23521 . - 0 ID=cds-SNF32_03280;Parent=gene-SNF32_03280;Note=frameshifted;Ontology_term=GO:0006260,GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735733.1;locus_tag=SNF32_03280;product=DNA topoisomerase IV subunit A;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 23533 25563 . - . ID=gene-SNF32_03285;Name=parE;gbkey=Gene;gene=parE;gene_biotype=pseudogene;locus_tag=SNF32_03285;pseudo=true JAXGFV010000004.1 Protein Homology CDS 23533 25563 . - 0 ID=cds-SNF32_03285;Parent=gene-SNF32_03285;Note=frameshifted;Ontology_term=GO:0006260,GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002331043.1;locus_tag=SNF32_03285;product=DNA topoisomerase IV subunit B;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank gene 25849 26274 . - . ID=gene-SNF32_03290;Name=SNF32_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03290 JAXGFV010000004.1 Protein Homology CDS 25849 26274 . - 0 ID=cds-MDY4306785.1;Parent=gene-SNF32_03290;Dbxref=NCBI_GP:MDY4306785.1;Name=MDY4306785.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723887.1;locus_tag=SNF32_03290;product=CoA-binding protein;protein_id=MDY4306785.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 26370 27004 . + . ID=gene-SNF32_03295;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=pseudogene;locus_tag=SNF32_03295;pseudo=true JAXGFV010000004.1 Protein Homology CDS 26370 27004 . + 0 ID=cds-SNF32_03295;Parent=gene-SNF32_03295;Note=frameshifted;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735736.1;locus_tag=SNF32_03295;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank gene 27141 28016 . - . ID=gene-SNF32_03300;Name=SNF32_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03300 JAXGFV010000004.1 Protein Homology CDS 27141 28016 . - 0 ID=cds-MDY4306786.1;Parent=gene-SNF32_03300;Dbxref=NCBI_GP:MDY4306786.1;Name=MDY4306786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002296994.1;locus_tag=SNF32_03300;product=aldose 1-epimerase family protein;protein_id=MDY4306786.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 28083 28873 . - . ID=gene-SNF32_03305;Name=codY;gbkey=Gene;gene=codY;gene_biotype=pseudogene;locus_tag=SNF32_03305;pseudo=true JAXGFV010000004.1 Protein Homology CDS 28083 28873 . - 0 ID=cds-SNF32_03305;Parent=gene-SNF32_03305;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700,GO:0005525,GO:0016597;gbkey=CDS;gene=codY;go_function=DNA-binding transcription factor activity|0003700||IEA,GTP binding|0005525||IEA,amino acid binding|0016597||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016176812.1;locus_tag=SNF32_03305;product=GTP-sensing pleiotropic transcriptional regulator CodY;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 28888 30282 . - . ID=gene-SNF32_03310;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=pseudogene;locus_tag=SNF32_03310;pseudo=true JAXGFV010000004.1 Protein Homology CDS 28888 30282 . - 0 ID=cds-SNF32_03310;Parent=gene-SNF32_03310;Note=frameshifted;Ontology_term=GO:0005524,GO:0008233,GO:0016887;gbkey=CDS;gene=hslU;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002409948.1;locus_tag=SNF32_03310;product=ATP-dependent protease ATPase subunit HslU;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 30294 30841 . - . ID=gene-SNF32_03315;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=pseudogene;locus_tag=SNF32_03315;pseudo=true JAXGFV010000004.1 Protein Homology CDS 30294 30841 . - 0 ID=cds-SNF32_03315;Parent=gene-SNF32_03315;Note=frameshifted;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002357489.1;locus_tag=SNF32_03315;product=ATP-dependent protease subunit HslV;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 30866 31786 . - . ID=gene-SNF32_03320;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=pseudogene;locus_tag=SNF32_03320;pseudo=true JAXGFV010000004.1 Protein Homology CDS 30866 31786 . - 0 ID=cds-SNF32_03320;Parent=gene-SNF32_03320;Note=frameshifted;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008264721.1;locus_tag=SNF32_03320;product=tyrosine recombinase XerC;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 32035 33359 . - . ID=gene-SNF32_03325;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=pseudogene;locus_tag=SNF32_03325;pseudo=true JAXGFV010000004.1 Protein Homology CDS 32035 33359 . - 0 ID=cds-SNF32_03325;Parent=gene-SNF32_03325;Note=frameshifted;Ontology_term=GO:0008033,GO:0047151,GO:0050660;gbkey=CDS;gene=trmFO;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C 5%2C10-methylenetetrahydrofolate-dependent|0047151||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735742.1;locus_tag=SNF32_03325;product=FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 33382 35458 . - . ID=gene-SNF32_03330;Name=topA;gbkey=Gene;gene=topA;gene_biotype=pseudogene;locus_tag=SNF32_03330;pseudo=true JAXGFV010000004.1 Protein Homology CDS 33382 35458 . - 0 ID=cds-SNF32_03330;Parent=gene-SNF32_03330;Note=frameshifted;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002380330.1;locus_tag=SNF32_03330;product=type I DNA topoisomerase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 35585 36440 . - . ID=gene-SNF32_03335;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=pseudogene;locus_tag=SNF32_03335;pseudo=true JAXGFV010000004.1 Protein Homology CDS 35585 36440 . - 0 ID=cds-SNF32_03335;Parent=gene-SNF32_03335;Note=frameshifted;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735744.1;locus_tag=SNF32_03335;product=DNA-processing protein DprA;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 36495 37261 . - . ID=gene-SNF32_03340;Name=SNF32_03340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03340;pseudo=true JAXGFV010000004.1 Protein Homology CDS 36495 37261 . - 0 ID=cds-SNF32_03340;Parent=gene-SNF32_03340;Note=frameshifted;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735745.1;locus_tag=SNF32_03340;product=ribonuclease HII;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 37254 38113 . - . ID=gene-SNF32_03345;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=pseudogene;locus_tag=SNF32_03345;pseudo=true JAXGFV010000004.1 Protein Homology CDS 37254 38113 . - 0 ID=cds-SNF32_03345;Parent=gene-SNF32_03345;Note=frameshifted;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002324661.1;locus_tag=SNF32_03345;product=ribosome biogenesis GTPase YlqF;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank gene 38599 39003 . - . ID=gene-SNF32_03350;Name=SNF32_03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03350 JAXGFV010000004.1 GeneMarkS-2+ CDS 38599 39003 . - 0 ID=cds-MDY4306787.1;Parent=gene-SNF32_03350;Dbxref=NCBI_GP:MDY4306787.1;Name=MDY4306787.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03350;product=hypothetical protein;protein_id=MDY4306787.1;transl_table=11 JAXGFV010000004.1 Genbank gene 39641 40318 . - . ID=gene-SNF32_03355;Name=SNF32_03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03355 JAXGFV010000004.1 Protein Homology CDS 39641 40318 . - 0 ID=cds-MDY4306788.1;Parent=gene-SNF32_03355;Dbxref=NCBI_GP:MDY4306788.1;Name=MDY4306788.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010745402.1;locus_tag=SNF32_03355;product=helix-turn-helix transcriptional regulator;protein_id=MDY4306788.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 40674 41071 . + . ID=gene-SNF32_03360;Name=SNF32_03360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03360;pseudo=true JAXGFV010000004.1 Protein Homology CDS 40674 41071 . + 0 ID=cds-SNF32_03360;Parent=gene-SNF32_03360;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002330224.1;locus_tag=SNF32_03360;product=VOC family protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 41123 41679 . - . ID=gene-SNF32_03365;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=pseudogene;locus_tag=SNF32_03365;pseudo=true JAXGFV010000004.1 Protein Homology CDS 41123 41679 . - 0 ID=cds-SNF32_03365;Parent=gene-SNF32_03365;Note=frameshifted;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002313873.1;locus_tag=SNF32_03365;product=signal peptidase I;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank gene 41920 42147 . - . ID=gene-SNF32_03370;Name=SNF32_03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03370 JAXGFV010000004.1 Protein Homology CDS 41920 42147 . - 0 ID=cds-MDY4306789.1;Parent=gene-SNF32_03370;Dbxref=NCBI_GP:MDY4306789.1;Name=MDY4306789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723629.1;locus_tag=SNF32_03370;product=YozE family protein;protein_id=MDY4306789.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 42367 42660 . - . ID=gene-SNF32_03375;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=pseudogene;locus_tag=SNF32_03375;pseudo=true JAXGFV010000004.1 Protein Homology CDS 42367 42660 . - 0 ID=cds-SNF32_03375;Parent=gene-SNF32_03375;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: protein motif:HMM:TIGR00401.1;locus_tag=SNF32_03375;product=peptide-methionine (S)-S-oxide reductase MsrA;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 42693 43329 . - . ID=gene-SNF32_03380;Name=SNF32_03380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03380;pseudo=true JAXGFV010000004.1 Protein Homology CDS 42693 43329 . - 0 ID=cds-SNF32_03380;Parent=gene-SNF32_03380;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002288396.1;locus_tag=SNF32_03380;product=YpmS family protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank gene 43339 44235 . - . ID=gene-SNF32_03385;Name=SNF32_03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03385 JAXGFV010000004.1 Protein Homology CDS 43339 44235 . - 0 ID=cds-MDY4306790.1;Parent=gene-SNF32_03385;Dbxref=NCBI_GP:MDY4306790.1;Name=MDY4306790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723627.1;locus_tag=SNF32_03385;product=SGNH/GDSL hydrolase family protein;protein_id=MDY4306790.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 44476 45317 . - . ID=gene-SNF32_03390;Name=SNF32_03390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03390;pseudo=true JAXGFV010000004.1 Protein Homology CDS 44476 45317 . - 0 ID=cds-SNF32_03390;Parent=gene-SNF32_03390;Note=frameshifted;Ontology_term=GO:0005504;gbkey=CDS;go_function=fatty acid binding|0005504||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002298122.1;locus_tag=SNF32_03390;product=DegV family protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 45579 46090 . - . ID=gene-SNF32_03395;Name=SNF32_03395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03395;pseudo=true JAXGFV010000004.1 Protein Homology CDS 45579 46090 . - 0 ID=cds-SNF32_03395;Parent=gene-SNF32_03395;Note=frameshifted;Ontology_term=GO:0004146,GO:0050661;gbkey=CDS;go_function=dihydrofolate reductase activity|0004146||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723626.1;locus_tag=SNF32_03395;product=dihydrofolate reductase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 46105 47051 . - . ID=gene-SNF32_03400;Name=SNF32_03400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03400;pseudo=true JAXGFV010000004.1 Protein Homology CDS 46105 47051 . - 0 ID=cds-SNF32_03400;Parent=gene-SNF32_03400;Note=frameshifted;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002294416.1;locus_tag=SNF32_03400;product=thymidylate synthase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 47062 48940 . - . ID=gene-SNF32_03405;Name=SNF32_03405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03405;pseudo=true JAXGFV010000004.1 Protein Homology CDS 47062 48940 . - 0 ID=cds-SNF32_03405;Parent=gene-SNF32_03405;Note=frameshifted%3B internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002315210.1;locus_tag=SNF32_03405;product=ABC-F family ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 49156 51247 . - . ID=gene-SNF32_03410;Name=SNF32_03410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03410;pseudo=true JAXGFV010000004.1 Protein Homology CDS 49156 51247 . - 0 ID=cds-SNF32_03410;Parent=gene-SNF32_03410;Note=frameshifted;Ontology_term=GO:0006814,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735759.1;locus_tag=SNF32_03410;product=sodium:proton antiporter;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank gene 51260 51535 . - . ID=gene-SNF32_03415;Name=SNF32_03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03415 JAXGFV010000004.1 Protein Homology CDS 51260 51535 . - 0 ID=cds-MDY4306791.1;Parent=gene-SNF32_03415;Dbxref=NCBI_GP:MDY4306791.1;Name=MDY4306791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002337751.1;locus_tag=SNF32_03415;product=hypothetical protein;protein_id=MDY4306791.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 51764 52217 . - . ID=gene-SNF32_03420;Name=SNF32_03420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03420;pseudo=true JAXGFV010000004.1 Protein Homology CDS 51764 52217 . - 0 ID=cds-SNF32_03420;Parent=gene-SNF32_03420;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002290187.1;locus_tag=SNF32_03420;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 52481 53683 . - . ID=gene-SNF32_03425;Name=SNF32_03425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03425;pseudo=true JAXGFV010000004.1 Protein Homology CDS 52481 53683 . - 0 ID=cds-SNF32_03425;Parent=gene-SNF32_03425;Note=frameshifted;Ontology_term=GO:0001680,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735762.1;locus_tag=SNF32_03425;product=CCA tRNA nucleotidyltransferase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 53703 54038 . - . ID=gene-SNF32_03430;Name=SNF32_03430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03430;pseudo=true JAXGFV010000004.1 Protein Homology CDS 53703 54038 . - 0 ID=cds-SNF32_03430;Parent=gene-SNF32_03430;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735763.1;locus_tag=SNF32_03430;product=nucleotide pyrophosphohydrolase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 54285 55153 . + . ID=gene-SNF32_03435;Name=SNF32_03435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03435;pseudo=true JAXGFV010000004.1 Protein Homology CDS 54285 55153 . + 0 ID=cds-SNF32_03435;Parent=gene-SNF32_03435;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010719557.1;locus_tag=SNF32_03435;product=YitT family protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 55884 56443 . - . ID=gene-SNF32_03440;Name=SNF32_03440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03440;pseudo=true JAXGFV010000004.1 Protein Homology CDS 55884 56443 . - 0 ID=cds-SNF32_03440;Parent=gene-SNF32_03440;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735765.1;locus_tag=SNF32_03440;product=YpiB family protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 56449 57685 . - . ID=gene-SNF32_03445;Name=SNF32_03445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03445;pseudo=true JAXGFV010000004.1 Protein Homology CDS 56449 57685 . - 0 ID=cds-SNF32_03445;Parent=gene-SNF32_03445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014125365.1;locus_tag=SNF32_03445;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank gene 57706 57870 . - . ID=gene-SNF32_03450;Name=SNF32_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03450 JAXGFV010000004.1 GeneMarkS-2+ CDS 57706 57870 . - 0 ID=cds-MDY4306792.1;Parent=gene-SNF32_03450;Dbxref=NCBI_GP:MDY4306792.1;Name=MDY4306792.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03450;product=hypothetical protein;protein_id=MDY4306792.1;transl_table=11 JAXGFV010000004.1 Genbank gene 57992 58228 . - . ID=gene-SNF32_03455;Name=SNF32_03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03455 JAXGFV010000004.1 GeneMarkS-2+ CDS 57992 58228 . - 0 ID=cds-MDY4306793.1;Parent=gene-SNF32_03455;Dbxref=NCBI_GP:MDY4306793.1;Name=MDY4306793.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03455;product=hypothetical protein;protein_id=MDY4306793.1;transl_table=11 JAXGFV010000004.1 Genbank gene 58225 58605 . - . ID=gene-SNF32_03460;Name=SNF32_03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03460 JAXGFV010000004.1 GeneMarkS-2+ CDS 58225 58605 . - 0 ID=cds-MDY4306794.1;Parent=gene-SNF32_03460;Dbxref=NCBI_GP:MDY4306794.1;Name=MDY4306794.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03460;product=hypothetical protein;protein_id=MDY4306794.1;transl_table=11 JAXGFV010000004.1 Genbank gene 58622 58747 . - . ID=gene-SNF32_03465;Name=SNF32_03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03465 JAXGFV010000004.1 GeneMarkS-2+ CDS 58622 58747 . - 0 ID=cds-MDY4306795.1;Parent=gene-SNF32_03465;Dbxref=NCBI_GP:MDY4306795.1;Name=MDY4306795.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03465;product=hypothetical protein;protein_id=MDY4306795.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 58988 59262 . - . ID=gene-SNF32_03470;Name=SNF32_03470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03470;pseudo=true JAXGFV010000004.1 Protein Homology CDS 58988 59262 . - 0 ID=cds-SNF32_03470;Parent=gene-SNF32_03470;Note=frameshifted;Ontology_term=GO:0030261,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007208657.1;locus_tag=SNF32_03470;product=HU family DNA-binding protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 59504 60813 . - . ID=gene-SNF32_03475;Name=der;gbkey=Gene;gene=der;gene_biotype=pseudogene;locus_tag=SNF32_03475;pseudo=true JAXGFV010000004.1 Protein Homology CDS 59504 60813 . - 0 ID=cds-SNF32_03475;Parent=gene-SNF32_03475;Note=frameshifted;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018377046.1;locus_tag=SNF32_03475;product=ribosome biogenesis GTPase Der;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 61021 62254 . - . ID=gene-SNF32_03480;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=pseudogene;locus_tag=SNF32_03480;pseudo=true JAXGFV010000004.1 Protein Homology CDS 61021 62254 . - 0 ID=cds-SNF32_03480;Parent=gene-SNF32_03480;Note=frameshifted;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010751271.1;locus_tag=SNF32_03480;product=30S ribosomal protein S1;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 62386 63063 . - . ID=gene-SNF32_03485;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=pseudogene;locus_tag=SNF32_03485;pseudo=true JAXGFV010000004.1 Protein Homology CDS 62386 63063 . - 0 ID=cds-SNF32_03485;Parent=gene-SNF32_03485;Note=frameshifted;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735770.1;locus_tag=SNF32_03485;product=(d)CMP kinase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank gene 63188 63823 . - . ID=gene-SNF32_03490;Name=SNF32_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03490 JAXGFV010000004.1 Protein Homology CDS 63188 63823 . - 0 ID=cds-MDY4306796.1;Parent=gene-SNF32_03490;Dbxref=NCBI_GP:MDY4306796.1;Name=MDY4306796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002315217.1;locus_tag=SNF32_03490;product=SAG1386/EF1546 family surface-associated protein;protein_id=MDY4306796.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 63906 65293 . - . ID=gene-SNF32_03495;Name=SNF32_03495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03495;pseudo=true JAXGFV010000004.1 Protein Homology CDS 63906 65293 . - 0 ID=cds-SNF32_03495;Parent=gene-SNF32_03495;Note=frameshifted;Ontology_term=GO:0006310,GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735772.1;locus_tag=SNF32_03495;product=RecQ family ATP-dependent DNA helicase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank gene 65280 65402 . - . ID=gene-SNF32_03500;Name=SNF32_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03500 JAXGFV010000004.1 GeneMarkS-2+ CDS 65280 65402 . - 0 ID=cds-MDY4306797.1;Parent=gene-SNF32_03500;Dbxref=NCBI_GP:MDY4306797.1;Name=MDY4306797.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03500;product=hypothetical protein;protein_id=MDY4306797.1;transl_table=11 JAXGFV010000004.1 Genbank gene 65435 65575 . - . ID=gene-SNF32_03505;Name=SNF32_03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03505 JAXGFV010000004.1 Protein Homology CDS 65435 65575 . - 0 ID=cds-MDY4306798.1;Parent=gene-SNF32_03505;Dbxref=NCBI_GP:MDY4306798.1;Name=MDY4306798.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025846.3;locus_tag=SNF32_03505;product=helix-turn-helix domain-containing protein;protein_id=MDY4306798.1;transl_table=11 JAXGFV010000004.1 Genbank gene 65569 66087 . - . ID=gene-SNF32_03510;Name=SNF32_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03510 JAXGFV010000004.1 GeneMarkS-2+ CDS 65569 66087 . - 0 ID=cds-MDY4306799.1;Parent=gene-SNF32_03510;Dbxref=NCBI_GP:MDY4306799.1;Name=MDY4306799.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03510;product=hypothetical protein;protein_id=MDY4306799.1;transl_table=11 JAXGFV010000004.1 Genbank gene 66326 66571 . + . ID=gene-SNF32_03515;Name=SNF32_03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03515 JAXGFV010000004.1 Protein Homology CDS 66326 66571 . + 0 ID=cds-MDY4306800.1;Parent=gene-SNF32_03515;Dbxref=NCBI_GP:MDY4306800.1;Name=MDY4306800.1;Ontology_term=GO:0005506,GO:0009055,GO:0051539;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016172334.1;locus_tag=SNF32_03515;product=ferredoxin;protein_id=MDY4306800.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 66802 67532 . - . ID=gene-SNF32_03520;Name=SNF32_03520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03520;pseudo=true JAXGFV010000004.1 Protein Homology CDS 66802 67532 . - 0 ID=cds-SNF32_03520;Parent=gene-SNF32_03520;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002301243.1;locus_tag=SNF32_03520;product=alpha/beta hydrolase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 67746 69083 . - . ID=gene-SNF32_03525;Name=SNF32_03525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03525;pseudo=true JAXGFV010000004.1 Protein Homology CDS 67746 69083 . - 0 ID=cds-SNF32_03525;Parent=gene-SNF32_03525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002306940.1;locus_tag=SNF32_03525;product=M20 family metallopeptidase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank gene 69457 70980 . - . ID=gene-SNF32_03530;Name=SNF32_03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03530 JAXGFV010000004.1 Protein Homology CDS 69457 70980 . - 0 ID=cds-MDY4306801.1;Parent=gene-SNF32_03530;Dbxref=NCBI_GP:MDY4306801.1;Name=MDY4306801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016627896.1;locus_tag=SNF32_03530;product=YfcC family protein;protein_id=MDY4306801.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 71532 72141 . - . ID=gene-SNF32_03535;Name=SNF32_03535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03535;pseudo=true JAXGFV010000004.1 Protein Homology CDS 71532 72141 . - 0 ID=cds-SNF32_03535;Parent=gene-SNF32_03535;Note=frameshifted;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002294393.1;locus_tag=SNF32_03535;product=ECF transporter S component;pseudo=true;transl_table=11 JAXGFV010000004.1 cmsearch riboswitch 72268 72390 . - . ID=id-JAXGFV010000004.1:72268..72390;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch JAXGFV010000004.1 Genbank gene 72473 73189 . - . ID=gene-SNF32_03540;Name=SNF32_03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03540 JAXGFV010000004.1 Protein Homology CDS 72473 73189 . - 0 ID=cds-MDY4306802.1;Parent=gene-SNF32_03540;Dbxref=NCBI_GP:MDY4306802.1;Name=MDY4306802.1;Ontology_term=GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005878594.1;locus_tag=SNF32_03540;product=pseudouridine synthase;protein_id=MDY4306802.1;transl_table=11 JAXGFV010000004.1 Genbank gene 73137 73763 . - . ID=gene-SNF32_03545;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=SNF32_03545 JAXGFV010000004.1 Protein Homology CDS 73137 73763 . - 0 ID=cds-MDY4306803.1;Parent=gene-SNF32_03545;Dbxref=NCBI_GP:MDY4306803.1;Name=MDY4306803.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005237102.1;locus_tag=SNF32_03545;product=SMC-Scp complex subunit ScpB;protein_id=MDY4306803.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 73747 74513 . - . ID=gene-SNF32_03550;Name=SNF32_03550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03550;pseudo=true JAXGFV010000004.1 Protein Homology CDS 73747 74513 . - 0 ID=cds-SNF32_03550;Parent=gene-SNF32_03550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002319397.1;locus_tag=SNF32_03550;product=segregation/condensation protein A;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 74510 74877 . - . ID=gene-SNF32_03555;Name=SNF32_03555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03555;pseudo=true JAXGFV010000004.1 Protein Homology CDS 74510 74877 . - 0 ID=cds-SNF32_03555;Parent=gene-SNF32_03555;Note=frameshifted;Ontology_term=GO:0008080,GO:0016747;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723231.1;locus_tag=SNF32_03555;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank gene 74932 75780 . - . ID=gene-SNF32_03560;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=SNF32_03560 JAXGFV010000004.1 Protein Homology CDS 74932 75780 . - 0 ID=cds-MDY4306804.1;Parent=gene-SNF32_03560;Dbxref=NCBI_GP:MDY4306804.1;Name=MDY4306804.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF001399.0;locus_tag=SNF32_03560;product=site-specific tyrosine recombinase XerD;protein_id=MDY4306804.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 75876 76282 . - . ID=gene-SNF32_03565;Name=SNF32_03565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03565;pseudo=true JAXGFV010000004.1 Protein Homology CDS 75876 76282 . - 0 ID=cds-SNF32_03565;Parent=gene-SNF32_03565;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002309612.1;locus_tag=SNF32_03565;product=Fur family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 76424 77311 . - . ID=gene-SNF32_03570;Name=SNF32_03570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03570;pseudo=true JAXGFV010000004.1 Protein Homology CDS 76424 77311 . - 0 ID=cds-SNF32_03570;Parent=gene-SNF32_03570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010772545.1;locus_tag=SNF32_03570;product=S1-like domain-containing RNA-binding protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 77592 79591 . - . ID=gene-SNF32_03575;Name=SNF32_03575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03575;pseudo=true JAXGFV010000004.1 Protein Homology CDS 77592 79591 . - 0 ID=cds-SNF32_03575;Parent=gene-SNF32_03575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016631810.1;locus_tag=SNF32_03575;product=cell division site-positioning protein MapZ family protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 79917 80986 . - . ID=gene-SNF32_03580;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=pseudogene;locus_tag=SNF32_03580;pseudo=true JAXGFV010000004.1 Protein Homology CDS 79917 80986 . - 0 ID=cds-SNF32_03580;Parent=gene-SNF32_03580;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014524818.1;locus_tag=SNF32_03580;product=RNA polymerase sigma factor RpoD;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 81048 82884 . - . ID=gene-SNF32_03585;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=pseudogene;locus_tag=SNF32_03585;pseudo=true JAXGFV010000004.1 Protein Homology CDS 81048 82884 . - 0 ID=cds-SNF32_03585;Parent=gene-SNF32_03585;Note=frameshifted;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002337760.1;locus_tag=SNF32_03585;product=DNA primase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 83051 85417 . - . ID=gene-SNF32_03590;Name=SNF32_03590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03590;pseudo=true JAXGFV010000004.1 Protein Homology CDS 83051 85417 . - 0 ID=cds-SNF32_03590;Parent=gene-SNF32_03590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723581.1;locus_tag=SNF32_03590;product=cation-translocating P-type ATPase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 85662 86515 . - . ID=gene-SNF32_03595;Name=SNF32_03595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03595;pseudo=true JAXGFV010000004.1 Protein Homology CDS 85662 86515 . - 0 ID=cds-SNF32_03595;Parent=gene-SNF32_03595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629620.1;locus_tag=SNF32_03595;product=DUF368 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 86597 87195 . - . ID=gene-SNF32_03600;Name=SNF32_03600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03600;pseudo=true JAXGFV010000004.1 Protein Homology CDS 86597 87195 . - 0 ID=cds-SNF32_03600;Parent=gene-SNF32_03600;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002289460.1;locus_tag=SNF32_03600;product=lysozyme family protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 87430 88161 . + . ID=gene-SNF32_03605;Name=SNF32_03605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03605;pseudo=true JAXGFV010000004.1 Protein Homology CDS 87430 88161 . + 0 ID=cds-SNF32_03605;Parent=gene-SNF32_03605;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010768735.1;locus_tag=SNF32_03605;product=alpha/beta hydrolase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 88165 90723 . + . ID=gene-SNF32_03610;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=pseudogene;locus_tag=SNF32_03610;pseudo=true JAXGFV010000004.1 Protein Homology CDS 88165 90723 . + 0 ID=cds-SNF32_03610;Parent=gene-SNF32_03610;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002290133.1;locus_tag=SNF32_03610;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 90815 91320 . - . ID=gene-SNF32_03615;Name=SNF32_03615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03615;pseudo=true JAXGFV010000004.1 Protein Homology CDS 90815 91320 . - 0 ID=cds-SNF32_03615;Parent=gene-SNF32_03615;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016176895.1;locus_tag=SNF32_03615;product=Fic family protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 91502 92688 . - . ID=gene-SNF32_03620;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=SNF32_03620;pseudo=true JAXGFV010000004.1 Protein Homology CDS 91502 92688 . - 0 ID=cds-SNF32_03620;Parent=gene-SNF32_03620;Note=frameshifted;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014335040.1;locus_tag=SNF32_03620;product=elongation factor Tu;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank gene 93095 93658 . - . ID=gene-SNF32_03625;Name=SNF32_03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03625 JAXGFV010000004.1 GeneMarkS-2+ CDS 93095 93658 . - 0 ID=cds-MDY4306805.1;Parent=gene-SNF32_03625;Dbxref=NCBI_GP:MDY4306805.1;Name=MDY4306805.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03625;product=hypothetical protein;protein_id=MDY4306805.1;transl_table=11 JAXGFV010000004.1 Genbank gene 93857 94705 . - . ID=gene-SNF32_03630;Name=SNF32_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03630 JAXGFV010000004.1 Protein Homology CDS 93857 94705 . - 0 ID=cds-MDY4306806.1;Parent=gene-SNF32_03630;Dbxref=NCBI_GP:MDY4306806.1;Name=MDY4306806.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025025.3;locus_tag=SNF32_03630;product=cellulose synthase catalytic subunit;protein_id=MDY4306806.1;transl_table=11 JAXGFV010000004.1 Genbank gene 95222 95569 . + . ID=gene-SNF32_03635;Name=SNF32_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03635 JAXGFV010000004.1 Protein Homology CDS 95222 95569 . + 0 ID=cds-MDY4306807.1;Parent=gene-SNF32_03635;Dbxref=NCBI_GP:MDY4306807.1;Name=MDY4306807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002309624.1;locus_tag=SNF32_03635;product=YxeA family protein;protein_id=MDY4306807.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 95697 96674 . - . ID=gene-SNF32_03640;Name=SNF32_03640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03640;pseudo=true JAXGFV010000004.1 Protein Homology CDS 95697 96674 . - 0 ID=cds-SNF32_03640;Parent=gene-SNF32_03640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010753276.1;locus_tag=SNF32_03640;product=nucleoid-associated protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 96855 97420 . + . ID=gene-SNF32_03645;Name=SNF32_03645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03645;pseudo=true JAXGFV010000004.1 Protein Homology CDS 96855 97420 . + 0 ID=cds-SNF32_03645;Parent=gene-SNF32_03645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012472.3;locus_tag=SNF32_03645;product=aldo/keto reductase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank gene 97422 97703 . + . ID=gene-SNF32_03650;Name=SNF32_03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03650 JAXGFV010000004.1 Protein Homology CDS 97422 97703 . + 0 ID=cds-MDY4306808.1;Parent=gene-SNF32_03650;Dbxref=NCBI_GP:MDY4306808.1;Name=MDY4306808.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012472.3;locus_tag=SNF32_03650;product=aldo/keto reductase;protein_id=MDY4306808.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 97726 97972 . + . ID=gene-SNF32_03655;Name=SNF32_03655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03655;pseudo=true JAXGFV010000004.1 Protein Homology CDS 97726 97972 . + 0 ID=cds-SNF32_03655;Parent=gene-SNF32_03655;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010751312.1;locus_tag=SNF32_03655;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 98276 99013 . + . ID=gene-SNF32_03660;Name=SNF32_03660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03660;pseudo=true JAXGFV010000004.1 Protein Homology CDS 98276 99013 . + 0 ID=cds-SNF32_03660;Parent=gene-SNF32_03660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002339428.1;locus_tag=SNF32_03660;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank gene 99132 100040 . - . ID=gene-SNF32_03665;Name=SNF32_03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03665 JAXGFV010000004.1 Protein Homology CDS 99132 100040 . - 0 ID=cds-MDY4306809.1;Parent=gene-SNF32_03665;Dbxref=NCBI_GP:MDY4306809.1;Name=MDY4306809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003126727.1;locus_tag=SNF32_03665;product=LCP family protein;protein_id=MDY4306809.1;transl_table=11 JAXGFV010000004.1 Genbank gene 100162 100512 . - . ID=gene-SNF32_03670;Name=SNF32_03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03670 JAXGFV010000004.1 Protein Homology CDS 100162 100512 . - 0 ID=cds-MDY4306810.1;Parent=gene-SNF32_03670;Dbxref=NCBI_GP:MDY4306810.1;Name=MDY4306810.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013718.3;locus_tag=SNF32_03670;product=phosphatase PAP2 family protein;protein_id=MDY4306810.1;transl_table=11 JAXGFV010000004.1 Genbank gene 100544 100729 . - . ID=gene-SNF32_03675;Name=SNF32_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03675 JAXGFV010000004.1 GeneMarkS-2+ CDS 100544 100729 . - 0 ID=cds-MDY4306811.1;Parent=gene-SNF32_03675;Dbxref=NCBI_GP:MDY4306811.1;Name=MDY4306811.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03675;product=hypothetical protein;protein_id=MDY4306811.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 100750 101888 . - . ID=gene-SNF32_03680;Name=SNF32_03680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03680;pseudo=true JAXGFV010000004.1 Protein Homology CDS 100750 101888 . - 0 ID=cds-SNF32_03680;Parent=gene-SNF32_03680;Note=frameshifted;Ontology_term=GO:0009252,GO:0051301;gbkey=CDS;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737333.1;locus_tag=SNF32_03680;product=FtsW/RodA/SpoVE family cell cycle protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank gene 101878 102138 . - . ID=gene-SNF32_03685;Name=SNF32_03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03685 JAXGFV010000004.1 Protein Homology CDS 101878 102138 . - 0 ID=cds-MDY4306812.1;Parent=gene-SNF32_03685;Dbxref=NCBI_GP:MDY4306812.1;Name=MDY4306812.1;Ontology_term=GO:0051301,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: protein motif:HMM:NF013279.3;locus_tag=SNF32_03685;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=MDY4306812.1;transl_table=11 JAXGFV010000004.1 Genbank gene 102177 102299 . - . ID=gene-SNF32_03690;Name=SNF32_03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03690 JAXGFV010000004.1 Protein Homology CDS 102177 102299 . - 0 ID=cds-MDY4306813.1;Parent=gene-SNF32_03690;Dbxref=NCBI_GP:MDY4306813.1;Name=MDY4306813.1;Ontology_term=GO:0051301,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: protein motif:HMM:NF013279.3;locus_tag=SNF32_03690;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=MDY4306813.1;transl_table=11 JAXGFV010000004.1 Genbank gene 102323 102601 . - . ID=gene-SNF32_03695;Name=SNF32_03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03695 JAXGFV010000004.1 GeneMarkS-2+ CDS 102323 102601 . - 0 ID=cds-MDY4306814.1;Parent=gene-SNF32_03695;Dbxref=NCBI_GP:MDY4306814.1;Name=MDY4306814.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03695;product=hypothetical protein;protein_id=MDY4306814.1;transl_table=11 JAXGFV010000004.1 Genbank gene 102631 102777 . - . ID=gene-SNF32_03700;Name=SNF32_03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03700 JAXGFV010000004.1 Protein Homology CDS 102631 102777 . - 0 ID=cds-MDY4306815.1;Parent=gene-SNF32_03700;Dbxref=NCBI_GP:MDY4306815.1;Name=MDY4306815.1;Ontology_term=GO:0051301,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: protein motif:HMM:NF013279.3;locus_tag=SNF32_03700;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=MDY4306815.1;transl_table=11 JAXGFV010000004.1 Genbank gene 102815 103015 . - . ID=gene-SNF32_03705;Name=SNF32_03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03705 JAXGFV010000004.1 GeneMarkS-2+ CDS 102815 103015 . - 0 ID=cds-MDY4306816.1;Parent=gene-SNF32_03705;Dbxref=NCBI_GP:MDY4306816.1;Name=MDY4306816.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03705;product=hypothetical protein;protein_id=MDY4306816.1;transl_table=11 JAXGFV010000004.1 cmsearch riboswitch 103100 103267 . - . ID=id-JAXGFV010000004.1:103100..103267;Dbxref=RFAM:RF00380;Note=The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria;bound_moiety=magnesium;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch JAXGFV010000004.1 Genbank pseudogene 103654 106086 . - . ID=gene-SNF32_03710;Name=SNF32_03710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03710;pseudo=true JAXGFV010000004.1 Protein Homology CDS 103654 106086 . - 0 ID=cds-SNF32_03710;Parent=gene-SNF32_03710;Note=frameshifted;Ontology_term=GO:0016054,GO:0004420;gbkey=CDS;go_function=hydroxymethylglutaryl-CoA reductase (NADPH) activity|0004420||IEA;go_process=organic acid catabolic process|0016054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016853299.1;locus_tag=SNF32_03710;product=hydroxymethylglutaryl-CoA reductase%2C degradative;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 106539 107693 . + . ID=gene-SNF32_03715;Name=SNF32_03715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03715;pseudo=true JAXGFV010000004.1 Protein Homology CDS 106539 107693 . + 0 ID=cds-SNF32_03715;Parent=gene-SNF32_03715;Note=frameshifted;Ontology_term=GO:0004421;gbkey=CDS;go_function=hydroxymethylglutaryl-CoA synthase activity|0004421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735808.1;locus_tag=SNF32_03715;product=hydroxymethylglutaryl-CoA synthase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank gene 107723 108082 . - . ID=gene-SNF32_03720;Name=SNF32_03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03720 JAXGFV010000004.1 GeneMarkS-2+ CDS 107723 108082 . - 0 ID=cds-MDY4306817.1;Parent=gene-SNF32_03720;Dbxref=NCBI_GP:MDY4306817.1;Name=MDY4306817.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03720;product=hypothetical protein;protein_id=MDY4306817.1;transl_table=11 JAXGFV010000004.1 Genbank gene 108188 108442 . - . ID=gene-SNF32_03725;Name=SNF32_03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03725 JAXGFV010000004.1 GeneMarkS-2+ CDS 108188 108442 . - 0 ID=cds-MDY4306818.1;Parent=gene-SNF32_03725;Dbxref=NCBI_GP:MDY4306818.1;Name=MDY4306818.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03725;product=hypothetical protein;protein_id=MDY4306818.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 108644 111305 . - . ID=gene-SNF32_03730;Name=SNF32_03730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03730;pseudo=true JAXGFV010000004.1 Protein Homology CDS 108644 111305 . - 0 ID=cds-SNF32_03730;Parent=gene-SNF32_03730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002331875.1;locus_tag=SNF32_03730;product=cation-translocating P-type ATPase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 111640 113085 . + . ID=gene-SNF32_03735;Name=cls;gbkey=Gene;gene=cls;gene_biotype=pseudogene;locus_tag=SNF32_03735;pseudo=true JAXGFV010000004.1 Protein Homology CDS 111640 113085 . + 0 ID=cds-SNF32_03735;Parent=gene-SNF32_03735;Note=frameshifted;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002324153.1;locus_tag=SNF32_03735;product=cardiolipin synthase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 113199 114012 . - . ID=gene-SNF32_03740;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=pseudogene;locus_tag=SNF32_03740;pseudo=true JAXGFV010000004.1 Protein Homology CDS 113199 114012 . - 0 ID=cds-SNF32_03740;Parent=gene-SNF32_03740;Note=frameshifted;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002330226.1;locus_tag=SNF32_03740;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank gene 114161 114601 . - . ID=gene-SNF32_03745;Name=SNF32_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03745 JAXGFV010000004.1 Protein Homology CDS 114161 114601 . - 0 ID=cds-MDY4306819.1;Parent=gene-SNF32_03745;Dbxref=NCBI_GP:MDY4306819.1;Name=MDY4306819.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002340577.1;locus_tag=SNF32_03745;product=universal stress protein;protein_id=MDY4306819.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 114796 116191 . - . ID=gene-SNF32_03750;Name=SNF32_03750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03750;pseudo=true JAXGFV010000004.1 Protein Homology CDS 114796 116191 . - 0 ID=cds-SNF32_03750;Parent=gene-SNF32_03750;Note=frameshifted;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010738736.1;locus_tag=SNF32_03750;product=glycoside hydrolase family 1 protein;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank gene 116344 117615 . + . ID=gene-SNF32_03755;Name=celB;gbkey=Gene;gene=celB;gene_biotype=protein_coding;locus_tag=SNF32_03755 JAXGFV010000004.1 Protein Homology CDS 116344 117615 . + 0 ID=cds-MDY4306820.1;Parent=gene-SNF32_03755;Dbxref=NCBI_GP:MDY4306820.1;Name=MDY4306820.1;Ontology_term=GO:0009401,GO:0008982,GO:0019191;gbkey=CDS;gene=celB;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,cellobiose transmembrane transporter activity|0019191||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010751336.1;locus_tag=SNF32_03755;product=PTS cellobiose transporter subunit IIC;protein_id=MDY4306820.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 117919 118639 . + . ID=gene-SNF32_03760;Name=SNF32_03760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03760;pseudo=true JAXGFV010000004.1 Protein Homology CDS 117919 118639 . + 0 ID=cds-SNF32_03760;Parent=gene-SNF32_03760;Note=frameshifted;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735816.1;locus_tag=SNF32_03760;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 118890 119865 . + . ID=gene-SNF32_03765;Name=SNF32_03765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03765;pseudo=true JAXGFV010000004.1 Protein Homology CDS 118890 119865 . + 0 ID=cds-SNF32_03765;Parent=gene-SNF32_03765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723477.1;locus_tag=SNF32_03765;product=ring-cleaving dioxygenase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 119927 120486 . + . ID=gene-SNF32_03770;Name=SNF32_03770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03770;pseudo=true JAXGFV010000004.1 Protein Homology CDS 119927 120486 . + 0 ID=cds-SNF32_03770;Parent=gene-SNF32_03770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002323563.1;locus_tag=SNF32_03770;product=alpha/beta hydrolase;pseudo=true;transl_table=11 JAXGFV010000004.1 Genbank gene 120694 120957 . - . ID=gene-SNF32_03775;Name=SNF32_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03775 JAXGFV010000004.1 Protein Homology CDS 120694 120957 . - 0 ID=cds-MDY4306821.1;Parent=gene-SNF32_03775;Dbxref=NCBI_GP:MDY4306821.1;Name=MDY4306821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723479.1;locus_tag=SNF32_03775;product=hypothetical protein;protein_id=MDY4306821.1;transl_table=11 JAXGFV010000004.1 Genbank gene 121329 121634 . - . ID=gene-SNF32_03780;Name=SNF32_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03780 JAXGFV010000004.1 Protein Homology CDS 121329 121634 . - 0 ID=cds-MDY4306822.1;Parent=gene-SNF32_03780;Dbxref=NCBI_GP:MDY4306822.1;Name=MDY4306822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735820.1;locus_tag=SNF32_03780;product=hypothetical protein;protein_id=MDY4306822.1;transl_table=11 JAXGFV010000004.1 Genbank gene 121725 121913 . - . ID=gene-SNF32_03785;Name=SNF32_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03785 JAXGFV010000004.1 GeneMarkS-2+ CDS 121725 121913 . - 0 ID=cds-MDY4306823.1;Parent=gene-SNF32_03785;Dbxref=NCBI_GP:MDY4306823.1;Name=MDY4306823.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03785;product=hypothetical protein;protein_id=MDY4306823.1;transl_table=11 JAXGFV010000004.1 Genbank gene 122112 122333 . - . ID=gene-SNF32_03790;Name=SNF32_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03790 JAXGFV010000004.1 GeneMarkS-2+ CDS 122112 122333 . - 0 ID=cds-MDY4306824.1;Parent=gene-SNF32_03790;Dbxref=NCBI_GP:MDY4306824.1;Name=MDY4306824.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03790;product=hypothetical protein;protein_id=MDY4306824.1;transl_table=11 JAXGFV010000004.1 Genbank gene 122348 122569 . - . ID=gene-SNF32_03795;Name=SNF32_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03795 JAXGFV010000004.1 GeneMarkS-2+ CDS 122348 122569 . - 0 ID=cds-MDY4306825.1;Parent=gene-SNF32_03795;Dbxref=NCBI_GP:MDY4306825.1;Name=MDY4306825.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03795;product=hypothetical protein;protein_id=MDY4306825.1;transl_table=11 JAXGFV010000004.1 Genbank gene 122566 122898 . - . ID=gene-SNF32_03800;Name=SNF32_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03800 JAXGFV010000004.1 GeneMarkS-2+ CDS 122566 122898 . - 0 ID=cds-MDY4306826.1;Parent=gene-SNF32_03800;Dbxref=NCBI_GP:MDY4306826.1;Name=MDY4306826.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03800;product=hypothetical protein;protein_id=MDY4306826.1;transl_table=11 JAXGFV010000004.1 Genbank pseudogene 122895 123277 . - . ID=gene-SNF32_03805;Name=SNF32_03805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03805;pseudo=true JAXGFV010000004.1 Protein Homology CDS 122895 123277 . - 0 ID=cds-SNF32_03805;Parent=gene-SNF32_03805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002393860.1;locus_tag=SNF32_03805;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000040.1 1 23797 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000040.1 Genbank region 1 23797 . + . ID=JAXGFV010000040.1:1..23797;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000040.1 Genbank pseudogene 181 1246 . - . ID=gene-SNF32_13050;Name=SNF32_13050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13050;pseudo=true JAXGFV010000040.1 Protein Homology CDS 181 1246 . - 0 ID=cds-SNF32_13050;Parent=gene-SNF32_13050;Note=frameshifted;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010760804.1;locus_tag=SNF32_13050;product=Xaa-Pro peptidase family protein;pseudo=true;transl_table=11 JAXGFV010000040.1 Genbank pseudogene 1546 2490 . + . ID=gene-SNF32_13055;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=pseudogene;locus_tag=SNF32_13055;pseudo=true JAXGFV010000040.1 Protein Homology CDS 1546 2490 . + 0 ID=cds-SNF32_13055;Parent=gene-SNF32_13055;Note=frameshifted;Ontology_term=GO:0005975,GO:0006355,GO:0001228,GO:0003677;gbkey=CDS;gene=ccpA;go_function=DNA-binding transcription activator activity%2C RNA polymerase II-specific|0001228||IEA,DNA binding|0003677||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000990602.1;locus_tag=SNF32_13055;product=catabolite control protein A;pseudo=true;transl_table=11 JAXGFV010000040.1 Genbank pseudogene 2712 5056 . - . ID=gene-SNF32_13060;Name=SNF32_13060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13060;pseudo=true JAXGFV010000040.1 Protein Homology CDS 2712 5056 . - 0 ID=cds-SNF32_13060;Parent=gene-SNF32_13060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723119.1;locus_tag=SNF32_13060;product=transglycosylase domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000040.1 Genbank pseudogene 5316 6213 . + . ID=gene-SNF32_13065;Name=SNF32_13065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13065;pseudo=true JAXGFV010000040.1 Protein Homology CDS 5316 6213 . + 0 ID=cds-SNF32_13065;Parent=gene-SNF32_13065;Note=frameshifted;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734938.1;locus_tag=SNF32_13065;product=deoxyribonuclease IV;pseudo=true;transl_table=11 JAXGFV010000040.1 Genbank pseudogene 6546 6956 . + . ID=gene-SNF32_13070;Name=SNF32_13070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13070;pseudo=true JAXGFV010000040.1 Protein Homology CDS 6546 6956 . + 0 ID=cds-SNF32_13070;Parent=gene-SNF32_13070;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016608514.1;locus_tag=SNF32_13070;product=MerR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000040.1 Genbank pseudogene 7030 7888 . + . ID=gene-SNF32_13075;Name=SNF32_13075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13075;pseudo=true JAXGFV010000040.1 Protein Homology CDS 7030 7888 . + 0 ID=cds-SNF32_13075;Parent=gene-SNF32_13075;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010767750.1;locus_tag=SNF32_13075;product=aldo/keto reductase;pseudo=true;transl_table=11 JAXGFV010000040.1 Genbank pseudogene 7988 9281 . + . ID=gene-SNF32_13080;Name=SNF32_13080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13080;pseudo=true JAXGFV010000040.1 Protein Homology CDS 7988 9281 . + 0 ID=cds-SNF32_13080;Parent=gene-SNF32_13080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002332326.1;locus_tag=SNF32_13080;product=MFS transporter;pseudo=true;transl_table=11 JAXGFV010000040.1 Genbank gene 9363 10925 . - . ID=gene-SNF32_13085;Name=SNF32_13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13085 JAXGFV010000040.1 Protein Homology CDS 9363 10925 . - 0 ID=cds-MDY4307795.1;Parent=gene-SNF32_13085;Dbxref=NCBI_GP:MDY4307795.1;Name=MDY4307795.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734943.1;locus_tag=SNF32_13085;product=Nramp family divalent metal transporter;protein_id=MDY4307795.1;transl_table=11 JAXGFV010000040.1 Genbank gene 11167 11301 . + . ID=gene-SNF32_13090;Name=SNF32_13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13090 JAXGFV010000040.1 GeneMarkS-2+ CDS 11167 11301 . + 0 ID=cds-MDY4307796.1;Parent=gene-SNF32_13090;Dbxref=NCBI_GP:MDY4307796.1;Name=MDY4307796.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13090;product=YneF family protein;protein_id=MDY4307796.1;transl_table=11 JAXGFV010000040.1 Genbank gene 11250 11390 . + . ID=gene-SNF32_13095;Name=SNF32_13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13095 JAXGFV010000040.1 Protein Homology CDS 11250 11390 . + 0 ID=cds-MDY4307797.1;Parent=gene-SNF32_13095;Dbxref=NCBI_GP:MDY4307797.1;Name=MDY4307797.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015624.3;locus_tag=SNF32_13095;product=YneF family protein;protein_id=MDY4307797.1;transl_table=11 JAXGFV010000040.1 Genbank pseudogene 11601 13349 . + . ID=gene-SNF32_13100;Name=SNF32_13100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13100;pseudo=true JAXGFV010000040.1 Protein Homology CDS 11601 13349 . + 0 ID=cds-SNF32_13100;Parent=gene-SNF32_13100;Note=frameshifted;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002304603.1;locus_tag=SNF32_13100;product=ABC transporter transmembrane domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000040.1 Genbank pseudogene 13349 15123 . + . ID=gene-SNF32_13105;Name=SNF32_13105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13105;pseudo=true JAXGFV010000040.1 Protein Homology CDS 13349 15123 . + 0 ID=cds-SNF32_13105;Parent=gene-SNF32_13105;Note=frameshifted;Ontology_term=GO:0005524,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005880372.1;locus_tag=SNF32_13105;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000040.1 Genbank pseudogene 15578 16404 . + . ID=gene-SNF32_13110;Name=SNF32_13110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13110;pseudo=true JAXGFV010000040.1 Protein Homology CDS 15578 16404 . + 0 ID=cds-SNF32_13110;Parent=gene-SNF32_13110;Note=frameshifted;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723114.1;locus_tag=SNF32_13110;product=PRD domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000040.1 Genbank pseudogene 16506 18390 . + . ID=gene-SNF32_13115;Name=SNF32_13115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13115;pseudo=true JAXGFV010000040.1 Protein Homology CDS 16506 18390 . + 0 ID=cds-SNF32_13115;Parent=gene-SNF32_13115;Note=frameshifted;Ontology_term=GO:0009401,GO:0015759,GO:0015573;gbkey=CDS;go_function=beta-glucoside transmembrane transporter activity|0015573||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,beta-glucoside transport|0015759||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002336802.1;locus_tag=SNF32_13115;product=beta-glucoside-specific PTS transporter subunit IIABC;pseudo=true;transl_table=11 JAXGFV010000040.1 Genbank pseudogene 18636 19538 . - . ID=gene-SNF32_13120;Name=SNF32_13120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13120;pseudo=true JAXGFV010000040.1 Protein Homology CDS 18636 19538 . - 0 ID=cds-SNF32_13120;Parent=gene-SNF32_13120;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734949.1;locus_tag=SNF32_13120;product=MurR/RpiR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000040.1 Genbank pseudogene 19841 21239 . + . ID=gene-SNF32_13125;Name=SNF32_13125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13125;pseudo=true JAXGFV010000040.1 Protein Homology CDS 19841 21239 . + 0 ID=cds-SNF32_13125;Parent=gene-SNF32_13125;Note=frameshifted;Ontology_term=GO:0005975,GO:0008706,GO:0046872;gbkey=CDS;go_function=6-phospho-beta-glucosidase activity|0008706||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734950.1;locus_tag=SNF32_13125;product=6-phospho-beta-glucosidase;pseudo=true;transl_table=11 JAXGFV010000040.1 Genbank pseudogene 21245 22673 . + . ID=gene-SNF32_13130;Name=SNF32_13130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13130;pseudo=true JAXGFV010000040.1 Protein Homology CDS 21245 22673 . + 0 ID=cds-SNF32_13130;Parent=gene-SNF32_13130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734951.1;locus_tag=SNF32_13130;product=6-phospho-beta-glucosidase;pseudo=true;transl_table=11 JAXGFV010000040.1 Genbank pseudogene 22816 23749 . + . ID=gene-SNF32_13135;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=pseudogene;locus_tag=SNF32_13135;pseudo=true JAXGFV010000040.1 Protein Homology CDS 22816 23749 . + 0 ID=cds-SNF32_13135;Parent=gene-SNF32_13135;Note=frameshifted;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADP) activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734952.1;locus_tag=SNF32_13135;product=thioredoxin-disulfide reductase;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000041.1 1 23544 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000041.1 Genbank region 1 23544 . + . ID=JAXGFV010000041.1:1..23544;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000041.1 Genbank gene 123 353 . + . ID=gene-SNF32_13140;Name=SNF32_13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13140 JAXGFV010000041.1 Protein Homology CDS 123 353 . + 0 ID=cds-MDY4307798.1;Parent=gene-SNF32_13140;Dbxref=NCBI_GP:MDY4307798.1;Name=MDY4307798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287607.1;locus_tag=SNF32_13140;product=YkuJ family protein;protein_id=MDY4307798.1;transl_table=11 JAXGFV010000041.1 Genbank pseudogene 347 1281 . - . ID=gene-SNF32_13145;Name=SNF32_13145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13145;pseudo=true JAXGFV010000041.1 Protein Homology CDS 347 1281 . - 0 ID=cds-SNF32_13145;Parent=gene-SNF32_13145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005876294.1;locus_tag=SNF32_13145;product=GIY-YIG nuclease family protein;pseudo=true;transl_table=11 JAXGFV010000041.1 Genbank pseudogene 1640 2078 . + . ID=gene-SNF32_13150;Name=SNF32_13150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13150;pseudo=true JAXGFV010000041.1 Protein Homology CDS 1640 2078 . + 0 ID=cds-SNF32_13150;Parent=gene-SNF32_13150;Note=frameshifted;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005471259.1;locus_tag=SNF32_13150;product=MarR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000041.1 Genbank pseudogene 2088 3048 . + . ID=gene-SNF32_13155;Name=SNF32_13155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13155;pseudo=true JAXGFV010000041.1 Protein Homology CDS 2088 3048 . + 0 ID=cds-SNF32_13155;Parent=gene-SNF32_13155;Note=frameshifted;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010738756.1;locus_tag=SNF32_13155;product=beta-ketoacyl-ACP synthase III;pseudo=true;transl_table=11 JAXGFV010000041.1 Genbank gene 3107 3325 . + . ID=gene-SNF32_13160;Name=SNF32_13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13160 JAXGFV010000041.1 Protein Homology CDS 3107 3325 . + 0 ID=cds-MDY4307799.1;Parent=gene-SNF32_13160;Dbxref=NCBI_GP:MDY4307799.1;Name=MDY4307799.1;Ontology_term=GO:0009245,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002344088.1;locus_tag=SNF32_13160;product=acyl carrier protein;protein_id=MDY4307799.1;transl_table=11 JAXGFV010000041.1 Genbank pseudogene 3434 4350 . + . ID=gene-SNF32_13165;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=pseudogene;locus_tag=SNF32_13165;pseudo=true JAXGFV010000041.1 Protein Homology CDS 3434 4350 . + 0 ID=cds-SNF32_13165;Parent=gene-SNF32_13165;Note=frameshifted;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005225891.1;locus_tag=SNF32_13165;product=ACP S-malonyltransferase;pseudo=true;transl_table=11 JAXGFV010000041.1 Genbank pseudogene 4387 5095 . + . ID=gene-SNF32_13170;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=pseudogene;locus_tag=SNF32_13170;pseudo=true JAXGFV010000041.1 Protein Homology CDS 4387 5095 . + 0 ID=cds-SNF32_13170;Parent=gene-SNF32_13170;Note=frameshifted;Ontology_term=GO:0006633,GO:0004316;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002324391.1;locus_tag=SNF32_13170;product=3-oxoacyl-[acyl-carrier-protein] reductase;pseudo=true;transl_table=11 JAXGFV010000041.1 Genbank pseudogene 5108 6341 . + . ID=gene-SNF32_13175;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=pseudogene;locus_tag=SNF32_13175;pseudo=true JAXGFV010000041.1 Protein Homology CDS 5108 6341 . + 0 ID=cds-SNF32_13175;Parent=gene-SNF32_13175;Note=frameshifted;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735874.1;locus_tag=SNF32_13175;product=beta-ketoacyl-ACP synthase II;pseudo=true;transl_table=11 JAXGFV010000041.1 Genbank pseudogene 6344 6822 . + . ID=gene-SNF32_13180;Name=accB;gbkey=Gene;gene=accB;gene_biotype=pseudogene;locus_tag=SNF32_13180;pseudo=true JAXGFV010000041.1 Protein Homology CDS 6344 6822 . + 0 ID=cds-SNF32_13180;Parent=gene-SNF32_13180;Note=frameshifted;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010738136.1;locus_tag=SNF32_13180;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;pseudo=true;transl_table=11 JAXGFV010000041.1 Genbank pseudogene 6842 7258 . + . ID=gene-SNF32_13185;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=pseudogene;locus_tag=SNF32_13185;pseudo=true JAXGFV010000041.1 Protein Homology CDS 6842 7258 . + 0 ID=cds-SNF32_13185;Parent=gene-SNF32_13185;Note=frameshifted;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723308.1;locus_tag=SNF32_13185;product=3-hydroxyacyl-ACP dehydratase FabZ;pseudo=true;transl_table=11 JAXGFV010000041.1 Genbank pseudogene 7266 8643 . + . ID=gene-SNF32_13190;Name=SNF32_13190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13190;pseudo=true JAXGFV010000041.1 Protein Homology CDS 7266 8643 . + 0 ID=cds-SNF32_13190;Parent=gene-SNF32_13190;Note=frameshifted;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723307.1;locus_tag=SNF32_13190;product=acetyl-CoA carboxylase biotin carboxylase subunit;pseudo=true;transl_table=11 JAXGFV010000041.1 Genbank gene 8645 9514 . + . ID=gene-SNF32_13195;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=SNF32_13195 JAXGFV010000041.1 Protein Homology CDS 8645 9514 . + 0 ID=cds-MDY4307800.1;Parent=gene-SNF32_13195;Dbxref=NCBI_GP:MDY4307800.1;Name=MDY4307800.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005225897.1;locus_tag=SNF32_13195;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=MDY4307800.1;transl_table=11 JAXGFV010000041.1 Genbank pseudogene 9507 10290 . + . ID=gene-SNF32_13200;Name=SNF32_13200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13200;pseudo=true JAXGFV010000041.1 Protein Homology CDS 9507 10290 . + 0 ID=cds-SNF32_13200;Parent=gene-SNF32_13200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002343529.1;locus_tag=SNF32_13200;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;pseudo=true;transl_table=11 JAXGFV010000041.1 Genbank gene 11054 11386 . - . ID=gene-SNF32_13205;Name=SNF32_13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13205 JAXGFV010000041.1 Protein Homology CDS 11054 11386 . - 0 ID=cds-MDY4307801.1;Parent=gene-SNF32_13205;Dbxref=NCBI_GP:MDY4307801.1;Name=MDY4307801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002308382.1;locus_tag=SNF32_13205;product=hypothetical protein;protein_id=MDY4307801.1;transl_table=11 JAXGFV010000041.1 Genbank gene 11893 12279 . + . ID=gene-SNF32_13210;Name=SNF32_13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13210 JAXGFV010000041.1 GeneMarkS-2+ CDS 11893 12279 . + 0 ID=cds-MDY4307802.1;Parent=gene-SNF32_13210;Dbxref=NCBI_GP:MDY4307802.1;Name=MDY4307802.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13210;product=hypothetical protein;protein_id=MDY4307802.1;transl_table=11 JAXGFV010000041.1 Genbank gene 12745 13338 . + . ID=gene-SNF32_13215;Name=SNF32_13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13215 JAXGFV010000041.1 Protein Homology CDS 12745 13338 . + 0 ID=cds-MDY4307803.1;Parent=gene-SNF32_13215;Dbxref=NCBI_GP:MDY4307803.1;Name=MDY4307803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737159.1;locus_tag=SNF32_13215;product=type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein;protein_id=MDY4307803.1;transl_table=11 JAXGFV010000041.1 Genbank pseudogene 13351 14207 . + . ID=gene-SNF32_13220;Name=SNF32_13220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13220;pseudo=true JAXGFV010000041.1 Protein Homology CDS 13351 14207 . + 0 ID=cds-SNF32_13220;Parent=gene-SNF32_13220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724520.1;locus_tag=SNF32_13220;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;pseudo=true;transl_table=11 JAXGFV010000041.1 Genbank pseudogene 14533 15347 . + . ID=gene-SNF32_13225;Name=SNF32_13225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13225;pseudo=true JAXGFV010000041.1 Protein Homology CDS 14533 15347 . + 0 ID=cds-SNF32_13225;Parent=gene-SNF32_13225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177120.1;locus_tag=SNF32_13225;product=transporter substrate-binding domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000041.1 Genbank pseudogene 15359 16047 . + . ID=gene-SNF32_13230;Name=SNF32_13230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13230;pseudo=true JAXGFV010000041.1 Protein Homology CDS 15359 16047 . + 0 ID=cds-SNF32_13230;Parent=gene-SNF32_13230;Note=frameshifted;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010740388.1;locus_tag=SNF32_13230;product=amino acid ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000041.1 Genbank pseudogene 16054 16807 . + . ID=gene-SNF32_13235;Name=SNF32_13235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13235;pseudo=true JAXGFV010000041.1 Protein Homology CDS 16054 16807 . + 0 ID=cds-SNF32_13235;Parent=gene-SNF32_13235;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF012235.3;locus_tag=SNF32_13235;product=amino acid ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000041.1 Genbank pseudogene 17104 17629 . + . ID=gene-SNF32_13240;Name=SNF32_13240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13240;pseudo=true JAXGFV010000041.1 Protein Homology CDS 17104 17629 . + 0 ID=cds-SNF32_13240;Parent=gene-SNF32_13240;Note=frameshifted;Ontology_term=GO:0008962;gbkey=CDS;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016853310.1;locus_tag=SNF32_13240;product=YqeG family HAD IIIA-type phosphatase;pseudo=true;transl_table=11 JAXGFV010000041.1 Genbank pseudogene 17626 18731 . + . ID=gene-SNF32_13245;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=pseudogene;locus_tag=SNF32_13245;pseudo=true JAXGFV010000041.1 Protein Homology CDS 17626 18731 . + 0 ID=cds-SNF32_13245;Parent=gene-SNF32_13245;Note=frameshifted;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=yqeH;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002370701.1;locus_tag=SNF32_13245;product=ribosome biogenesis GTPase YqeH;pseudo=true;transl_table=11 JAXGFV010000041.1 Genbank pseudogene 18746 19055 . + . ID=gene-SNF32_13250;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=pseudogene;locus_tag=SNF32_13250;pseudo=true JAXGFV010000041.1 Protein Homology CDS 18746 19055 . + 0 ID=cds-SNF32_13250;Parent=gene-SNF32_13250;Note=frameshifted;Ontology_term=GO:0008150,GO:0003723,GO:0005737;gbkey=CDS;gene=yhbY;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724120.1;locus_tag=SNF32_13250;product=ribosome assembly RNA-binding protein YhbY;pseudo=true;transl_table=11 JAXGFV010000041.1 Genbank pseudogene 19068 19714 . + . ID=gene-SNF32_13255;Name=SNF32_13255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13255;pseudo=true JAXGFV010000041.1 Protein Homology CDS 19068 19714 . + 0 ID=cds-SNF32_13255;Parent=gene-SNF32_13255;Note=frameshifted;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724119.1;locus_tag=SNF32_13255;product=nicotinate-nucleotide adenylyltransferase;pseudo=true;transl_table=11 JAXGFV010000041.1 Genbank pseudogene 19704 20287 . + . ID=gene-SNF32_13260;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=pseudogene;locus_tag=SNF32_13260;pseudo=true JAXGFV010000041.1 Protein Homology CDS 19704 20287 . + 0 ID=cds-SNF32_13260;Parent=gene-SNF32_13260;Note=frameshifted;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735861.1;locus_tag=SNF32_13260;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK;pseudo=true;transl_table=11 JAXGFV010000041.1 Genbank gene 20312 20665 . + . ID=gene-SNF32_13265;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=SNF32_13265 JAXGFV010000041.1 Protein Homology CDS 20312 20665 . + 0 ID=cds-MDY4307804.1;Parent=gene-SNF32_13265;Dbxref=NCBI_GP:MDY4307804.1;Name=MDY4307804.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007208572.1;locus_tag=SNF32_13265;product=ribosome silencing factor;protein_id=MDY4307804.1;transl_table=11 JAXGFV010000041.1 Genbank gene 20667 21437 . + . ID=gene-SNF32_13270;Name=SNF32_13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13270 JAXGFV010000041.1 Protein Homology CDS 20667 21437 . + 0 ID=cds-MDY4307805.1;Parent=gene-SNF32_13270;Dbxref=NCBI_GP:MDY4307805.1;Name=MDY4307805.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016624031.1;locus_tag=SNF32_13270;product=class I SAM-dependent methyltransferase;protein_id=MDY4307805.1;transl_table=11 JAXGFV010000041.1 Genbank pseudogene 21504 22700 . + . ID=gene-SNF32_13275;Name=SNF32_13275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13275;pseudo=true JAXGFV010000041.1 Protein Homology CDS 21504 22700 . + 0 ID=cds-SNF32_13275;Parent=gene-SNF32_13275;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724324.1;locus_tag=SNF32_13275;product=nucleotidyltransferase;pseudo=true;transl_table=11 JAXGFV010000041.1 Genbank pseudogene 22780 23497 . + . ID=gene-SNF32_13280;Name=SNF32_13280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13280;pseudo=true JAXGFV010000041.1 Protein Homology CDS 22780 23497 . + 0 ID=cds-SNF32_13280;Parent=gene-SNF32_13280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002373480.1;locus_tag=SNF32_13280;product=YebC/PmpR family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000042.1 1 23164 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000042.1 Genbank region 1 23164 . + . ID=JAXGFV010000042.1:1..23164;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000042.1 Genbank pseudogene 304 941 . - . ID=gene-SNF32_13285;Name=SNF32_13285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13285;pseudo=true JAXGFV010000042.1 Protein Homology CDS 304 941 . - 0 ID=cds-SNF32_13285;Parent=gene-SNF32_13285;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010743294.1;locus_tag=SNF32_13285;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000042.1 Genbank pseudogene 1114 5339 . + . ID=gene-SNF32_13290;Name=SNF32_13290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13290;pseudo=true JAXGFV010000042.1 Protein Homology CDS 1114 5339 . + 0 ID=cds-SNF32_13290;Parent=gene-SNF32_13290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016608763.1;locus_tag=SNF32_13290;product=acyl-CoA dehydratase activase-related protein;pseudo=true;transl_table=11 JAXGFV010000042.1 Genbank pseudogene 5576 6280 . + . ID=gene-SNF32_13295;Name=SNF32_13295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13295;pseudo=true JAXGFV010000042.1 Protein Homology CDS 5576 6280 . + 0 ID=cds-SNF32_13295;Parent=gene-SNF32_13295;Note=frameshifted;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737976.1;locus_tag=SNF32_13295;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000042.1 Genbank pseudogene 6365 7006 . - . ID=gene-SNF32_13300;Name=SNF32_13300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13300;pseudo=true JAXGFV010000042.1 Protein Homology CDS 6365 7006 . - 0 ID=cds-SNF32_13300;Parent=gene-SNF32_13300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734906.1;locus_tag=SNF32_13300;product=YigZ family protein;pseudo=true;transl_table=11 JAXGFV010000042.1 Genbank gene 7137 7427 . + . ID=gene-SNF32_13305;Name=SNF32_13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13305 JAXGFV010000042.1 Protein Homology CDS 7137 7427 . + 0 ID=cds-MDY4307806.1;Parent=gene-SNF32_13305;Dbxref=NCBI_GP:MDY4307806.1;Name=MDY4307806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734907.1;locus_tag=SNF32_13305;product=hypothetical protein;protein_id=MDY4307806.1;transl_table=11 JAXGFV010000042.1 Genbank gene 7889 8446 . + . ID=gene-SNF32_13310;Name=SNF32_13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13310 JAXGFV010000042.1 Protein Homology CDS 7889 8446 . + 0 ID=cds-MDY4307807.1;Parent=gene-SNF32_13310;Dbxref=NCBI_GP:MDY4307807.1;Name=MDY4307807.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012492.3;locus_tag=SNF32_13310;product=DEAD/DEAH box helicase;protein_id=MDY4307807.1;transl_table=11 JAXGFV010000042.1 Genbank gene 8443 8958 . + . ID=gene-SNF32_13315;Name=SNF32_13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13315 JAXGFV010000042.1 Protein Homology CDS 8443 8958 . + 0 ID=cds-MDY4307808.1;Parent=gene-SNF32_13315;Dbxref=NCBI_GP:MDY4307808.1;Name=MDY4307808.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012493.3;locus_tag=SNF32_13315;product=helicase-related protein;protein_id=MDY4307808.1;transl_table=11 JAXGFV010000042.1 Genbank gene 9185 9415 . + . ID=gene-SNF32_13320;Name=SNF32_13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13320 JAXGFV010000042.1 GeneMarkS-2+ CDS 9185 9415 . + 0 ID=cds-MDY4307809.1;Parent=gene-SNF32_13320;Dbxref=NCBI_GP:MDY4307809.1;Name=MDY4307809.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13320;product=hypothetical protein;protein_id=MDY4307809.1;transl_table=11 JAXGFV010000042.1 Genbank gene 9510 9680 . + . ID=gene-SNF32_13325;Name=SNF32_13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13325 JAXGFV010000042.1 Protein Homology CDS 9510 9680 . + 0 ID=cds-MDY4307810.1;Parent=gene-SNF32_13325;Dbxref=NCBI_GP:MDY4307810.1;Name=MDY4307810.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: protein motif:HMM:NF012383.3;locus_tag=SNF32_13325;product=phosphoribosyltransferase family protein;protein_id=MDY4307810.1;transl_table=11 JAXGFV010000042.1 Genbank pseudogene 9817 10367 . + . ID=gene-SNF32_13330;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=pseudogene;locus_tag=SNF32_13330;pseudo=true JAXGFV010000042.1 Protein Homology CDS 9817 10367 . + 0 ID=cds-SNF32_13330;Parent=gene-SNF32_13330;Note=frameshifted;Ontology_term=GO:0009386,GO:0045182,GO:0005840,GO:0022626;gbkey=CDS;gene=raiA;go_component=ribosome|0005840||IEA,cytosolic ribosome|0022626||IEA;go_function=translation regulator activity|0045182||IEA;go_process=translational attenuation|0009386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002292771.1;locus_tag=SNF32_13330;product=ribosome-associated translation inhibitor RaiA;pseudo=true;transl_table=11 JAXGFV010000042.1 Genbank pseudogene 10800 11995 . + . ID=gene-SNF32_13335;Name=SNF32_13335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13335;pseudo=true JAXGFV010000042.1 Protein Homology CDS 10800 11995 . + 0 ID=cds-SNF32_13335;Parent=gene-SNF32_13335;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019156.3;locus_tag=SNF32_13335;product=preprotein translocase subunit SecA;pseudo=true;transl_table=11 JAXGFV010000042.1 Genbank gene 11992 13113 . + . ID=gene-SNF32_13340;Name=SNF32_13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13340 JAXGFV010000042.1 Protein Homology CDS 11992 13113 . + 0 ID=cds-MDY4307811.1;Parent=gene-SNF32_13340;Dbxref=NCBI_GP:MDY4307811.1;Name=MDY4307811.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF019155.3;locus_tag=SNF32_13340;product=SEC-C metal-binding domain-containing protein;protein_id=MDY4307811.1;transl_table=11 JAXGFV010000042.1 Genbank pseudogene 13494 14591 . + . ID=gene-SNF32_13345;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=pseudogene;locus_tag=SNF32_13345;pseudo=true JAXGFV010000042.1 Protein Homology CDS 13494 14591 . + 0 ID=cds-SNF32_13345;Parent=gene-SNF32_13345;Note=frameshifted;gbkey=CDS;gene=prfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_122645302.1;locus_tag=SNF32_13345;product=peptide chain release factor 2;pseudo=true;transl_table=11 JAXGFV010000042.1 Genbank pseudogene 14702 15387 . + . ID=gene-SNF32_13350;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=pseudogene;locus_tag=SNF32_13350;pseudo=true JAXGFV010000042.1 Protein Homology CDS 14702 15387 . + 0 ID=cds-SNF32_13350;Parent=gene-SNF32_13350;Note=frameshifted;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005237293.1;locus_tag=SNF32_13350;product=cell division ATP-binding protein FtsE;pseudo=true;transl_table=11 JAXGFV010000042.1 Genbank pseudogene 15380 16263 . + . ID=gene-SNF32_13355;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=pseudogene;locus_tag=SNF32_13355;pseudo=true JAXGFV010000042.1 Protein Homology CDS 15380 16263 . + 0 ID=cds-SNF32_13355;Parent=gene-SNF32_13355;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;gene=ftsX;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010749773.1;locus_tag=SNF32_13355;product=permease-like cell division protein FtsX;pseudo=true;transl_table=11 JAXGFV010000042.1 Genbank pseudogene 16488 17933 . + . ID=gene-SNF32_13360;Name=cls;gbkey=Gene;gene=cls;gene_biotype=pseudogene;locus_tag=SNF32_13360;pseudo=true JAXGFV010000042.1 Protein Homology CDS 16488 17933 . + 0 ID=cds-SNF32_13360;Parent=gene-SNF32_13360;Note=frameshifted;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010782552.1;locus_tag=SNF32_13360;product=cardiolipin synthase;pseudo=true;transl_table=11 JAXGFV010000042.1 Genbank pseudogene 18305 19130 . + . ID=gene-SNF32_13365;Name=SNF32_13365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13365;pseudo=true JAXGFV010000042.1 Protein Homology CDS 18305 19130 . + 0 ID=cds-SNF32_13365;Parent=gene-SNF32_13365;Note=frameshifted;Ontology_term=GO:0042301;gbkey=CDS;go_function=phosphate ion binding|0042301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010759969.1;locus_tag=SNF32_13365;product=phosphate ABC transporter substrate-binding protein PstS family protein;pseudo=true;transl_table=11 JAXGFV010000042.1 Genbank pseudogene 19217 20163 . + . ID=gene-SNF32_13370;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=pseudogene;locus_tag=SNF32_13370;pseudo=true JAXGFV010000042.1 Protein Homology CDS 19217 20163 . + 0 ID=cds-SNF32_13370;Parent=gene-SNF32_13370;Note=frameshifted;Ontology_term=GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003646078.1;locus_tag=SNF32_13370;product=phosphate ABC transporter permease subunit PstC;pseudo=true;transl_table=11 JAXGFV010000042.1 Genbank gene 20163 21047 . + . ID=gene-SNF32_13375;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=SNF32_13375 JAXGFV010000042.1 Protein Homology CDS 20163 21047 . + 0 ID=cds-MDY4307812.1;Parent=gene-SNF32_13375;Dbxref=NCBI_GP:MDY4307812.1;Name=MDY4307812.1;Ontology_term=GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010764435.1;locus_tag=SNF32_13375;product=phosphate ABC transporter permease PstA;protein_id=MDY4307812.1;transl_table=11 JAXGFV010000042.1 Genbank gene 21062 21868 . + . ID=gene-SNF32_13380;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=SNF32_13380 JAXGFV010000042.1 Protein Homology CDS 21062 21868 . + 0 ID=cds-MDY4307813.1;Parent=gene-SNF32_13380;Dbxref=NCBI_GP:MDY4307813.1;Name=MDY4307813.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002408906.1;locus_tag=SNF32_13380;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=MDY4307813.1;transl_table=11 JAXGFV010000042.1 Genbank pseudogene 21884 22640 . + . ID=gene-SNF32_13385;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=pseudogene;locus_tag=SNF32_13385;pseudo=true JAXGFV010000042.1 Protein Homology CDS 21884 22640 . + 0 ID=cds-SNF32_13385;Parent=gene-SNF32_13385;Note=frameshifted;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002317877.1;locus_tag=SNF32_13385;product=phosphate ABC transporter ATP-binding protein PstB;pseudo=true;transl_table=11 JAXGFV010000042.1 Genbank pseudogene 22653 23164 . + . ID=gene-SNF32_13390;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=pseudogene;locus_tag=SNF32_13390;pseudo=true JAXGFV010000042.1 Protein Homology CDS 22653 23164 . + 0 ID=cds-SNF32_13390;Parent=gene-SNF32_13390;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0051049,GO:0003700;gbkey=CDS;gene=phoU;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transport|0051049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010723432.1;locus_tag=SNF32_13390;product=phosphate signaling complex protein PhoU;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000043.1 1 23049 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000043.1 Genbank region 1 23049 . + . ID=JAXGFV010000043.1:1..23049;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000043.1 Genbank gene 215 358 . + . ID=gene-SNF32_13395;Name=SNF32_13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13395 JAXGFV010000043.1 Protein Homology CDS 215 358 . + 0 ID=cds-MDY4307814.1;Parent=gene-SNF32_13395;Dbxref=NCBI_GP:MDY4307814.1;Name=MDY4307814.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026247.3;locus_tag=SNF32_13395;product=hypothetical protein;protein_id=MDY4307814.1;transl_table=11 JAXGFV010000043.1 Genbank gene 779 1033 . + . ID=gene-SNF32_13400;Name=SNF32_13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13400 JAXGFV010000043.1 Protein Homology CDS 779 1033 . + 0 ID=cds-MDY4307815.1;Parent=gene-SNF32_13400;Dbxref=NCBI_GP:MDY4307815.1;Name=MDY4307815.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026247.3;locus_tag=SNF32_13400;product=hypothetical protein;protein_id=MDY4307815.1;transl_table=11 JAXGFV010000043.1 Genbank pseudogene 1154 2574 . + . ID=gene-SNF32_13405;Name=SNF32_13405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13405;pseudo=true JAXGFV010000043.1 Protein Homology CDS 1154 2574 . + 0 ID=cds-SNF32_13405;Parent=gene-SNF32_13405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328616.1;locus_tag=SNF32_13405;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000043.1 Genbank pseudogene 2726 3682 . + . ID=gene-SNF32_13410;Name=SNF32_13410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13410;pseudo=true JAXGFV010000043.1 Protein Homology CDS 2726 3682 . + 0 ID=cds-SNF32_13410;Parent=gene-SNF32_13410;Note=frameshifted;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735925.1;locus_tag=SNF32_13410;product=NAD-dependent epimerase/dehydratase family protein;pseudo=true;transl_table=11 JAXGFV010000043.1 Genbank pseudogene 3794 4781 . - . ID=gene-SNF32_13415;Name=SNF32_13415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13415;pseudo=true JAXGFV010000043.1 Protein Homology CDS 3794 4781 . - 0 ID=cds-SNF32_13415;Parent=gene-SNF32_13415;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002347326.1;locus_tag=SNF32_13415;product=serine hydrolase domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000043.1 Genbank pseudogene 5159 6332 . + . ID=gene-SNF32_13420;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=pseudogene;locus_tag=SNF32_13420;pseudo=true JAXGFV010000043.1 Protein Homology CDS 5159 6332 . + 0 ID=cds-SNF32_13420;Parent=gene-SNF32_13420;Note=frameshifted;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723524.1;locus_tag=SNF32_13420;product=endolytic transglycosylase MltG;pseudo=true;transl_table=11 JAXGFV010000043.1 Genbank gene 6470 6949 . + . ID=gene-SNF32_13425;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=SNF32_13425 JAXGFV010000043.1 Protein Homology CDS 6470 6949 . + 0 ID=cds-MDY4307816.1;Parent=gene-SNF32_13425;Dbxref=NCBI_GP:MDY4307816.1;Name=MDY4307816.1;gbkey=CDS;gene=greA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016172390.1;locus_tag=SNF32_13425;product=transcription elongation factor GreA;protein_id=MDY4307816.1;transl_table=11 JAXGFV010000043.1 Genbank pseudogene 7128 7857 . + . ID=gene-SNF32_13430;Name=liaF;gbkey=Gene;gene=liaF;gene_biotype=pseudogene;locus_tag=SNF32_13430;pseudo=true JAXGFV010000043.1 Protein Homology CDS 7128 7857 . + 0 ID=cds-SNF32_13430;Parent=gene-SNF32_13430;Note=frameshifted;gbkey=CDS;gene=liaF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723159.1;locus_tag=SNF32_13430;product=cell wall-active antibiotics response protein LiaF;pseudo=true;transl_table=11 JAXGFV010000043.1 Genbank pseudogene 7854 8943 . + . ID=gene-SNF32_13435;Name=SNF32_13435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13435;pseudo=true JAXGFV010000043.1 Protein Homology CDS 7854 8943 . + 0 ID=cds-SNF32_13435;Parent=gene-SNF32_13435;Note=frameshifted;Ontology_term=GO:0000155,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016615854.1;locus_tag=SNF32_13435;product=sensor histidine kinase;pseudo=true;transl_table=11 JAXGFV010000043.1 Genbank pseudogene 8918 9548 . + . ID=gene-SNF32_13440;Name=SNF32_13440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13440;pseudo=true JAXGFV010000043.1 Protein Homology CDS 8918 9548 . + 0 ID=cds-SNF32_13440;Parent=gene-SNF32_13440;Note=frameshifted;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016624081.1;locus_tag=SNF32_13440;product=response regulator transcription factor;pseudo=true;transl_table=11 JAXGFV010000043.1 Genbank gene 9857 10276 . + . ID=gene-SNF32_13445;Name=SNF32_13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13445 JAXGFV010000043.1 GeneMarkS-2+ CDS 9857 10276 . + 0 ID=cds-MDY4307817.1;Parent=gene-SNF32_13445;Dbxref=NCBI_GP:MDY4307817.1;Name=MDY4307817.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13445;product=hypothetical protein;protein_id=MDY4307817.1;transl_table=11 JAXGFV010000043.1 Genbank gene 10396 10908 . + . ID=gene-SNF32_13450;Name=SNF32_13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13450 JAXGFV010000043.1 Protein Homology CDS 10396 10908 . + 0 ID=cds-MDY4307818.1;Parent=gene-SNF32_13450;Dbxref=NCBI_GP:MDY4307818.1;Name=MDY4307818.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014427.3;locus_tag=SNF32_13450;product=Ig-like domain-containing protein;protein_id=MDY4307818.1;transl_table=11 JAXGFV010000043.1 Genbank pseudogene 10986 11321 . + . ID=gene-SNF32_13455;Name=SNF32_13455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13455;pseudo=true JAXGFV010000043.1 Protein Homology CDS 10986 11321 . + 0 ID=cds-SNF32_13455;Parent=gene-SNF32_13455;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019176.3;locus_tag=SNF32_13455;product=N-acetylmuramoyl-L-alanine amidase;pseudo=true;transl_table=11 JAXGFV010000043.1 Genbank gene 11324 11539 . + . ID=gene-SNF32_13460;Name=SNF32_13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13460 JAXGFV010000043.1 Protein Homology CDS 11324 11539 . + 0 ID=cds-MDY4307819.1;Parent=gene-SNF32_13460;Dbxref=NCBI_GP:MDY4307819.1;Name=MDY4307819.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019176.3;locus_tag=SNF32_13460;product=hypothetical protein;protein_id=MDY4307819.1;transl_table=11 JAXGFV010000043.1 Genbank gene 11587 11817 . + . ID=gene-SNF32_13465;Name=SNF32_13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13465 JAXGFV010000043.1 Protein Homology CDS 11587 11817 . + 0 ID=cds-MDY4307820.1;Parent=gene-SNF32_13465;Dbxref=NCBI_GP:MDY4307820.1;Name=MDY4307820.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019176.3;locus_tag=SNF32_13465;product=hypothetical protein;protein_id=MDY4307820.1;transl_table=11 JAXGFV010000043.1 Genbank gene 11921 12901 . + . ID=gene-SNF32_13470;Name=SNF32_13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13470 JAXGFV010000043.1 Protein Homology CDS 11921 12901 . + 0 ID=cds-MDY4307821.1;Parent=gene-SNF32_13470;Dbxref=NCBI_GP:MDY4307821.1;Name=MDY4307821.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: protein motif:HMM:NF013670.3;locus_tag=SNF32_13470;product=N-acetylmuramoyl-L-alanine amidase;protein_id=MDY4307821.1;transl_table=11 JAXGFV010000043.1 cmsearch riboswitch 12985 13160 . + . ID=id-JAXGFV010000043.1:12985..13160;Dbxref=RFAM:RF00380;Note=The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria;bound_moiety=magnesium;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch JAXGFV010000043.1 Genbank gene 13385 13693 . + . ID=gene-SNF32_13475;Name=SNF32_13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13475 JAXGFV010000043.1 Protein Homology CDS 13385 13693 . + 0 ID=cds-MDY4307822.1;Parent=gene-SNF32_13475;Dbxref=NCBI_GP:MDY4307822.1;Name=MDY4307822.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015413.3;locus_tag=SNF32_13475;product=hypothetical protein;protein_id=MDY4307822.1;transl_table=11 JAXGFV010000043.1 Genbank gene 13690 13872 . + . ID=gene-SNF32_13480;Name=SNF32_13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13480 JAXGFV010000043.1 GeneMarkS-2+ CDS 13690 13872 . + 0 ID=cds-MDY4307823.1;Parent=gene-SNF32_13480;Dbxref=NCBI_GP:MDY4307823.1;Name=MDY4307823.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13480;product=hypothetical protein;protein_id=MDY4307823.1;transl_table=11 JAXGFV010000043.1 Genbank gene 13851 14693 . + . ID=gene-SNF32_13485;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=SNF32_13485 JAXGFV010000043.1 Protein Homology CDS 13851 14693 . + 0 ID=cds-MDY4307824.1;Parent=gene-SNF32_13485;Dbxref=NCBI_GP:MDY4307824.1;Name=MDY4307824.1;Ontology_term=GO:0015693,GO:0015095;gbkey=CDS;gene=mgtE;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: protein motif:HMM:TIGR00400.1;locus_tag=SNF32_13485;product=magnesium transporter;protein_id=MDY4307824.1;transl_table=11 JAXGFV010000043.1 Genbank gene 14880 15545 . + . ID=gene-SNF32_13490;Name=SNF32_13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13490 JAXGFV010000043.1 Protein Homology CDS 14880 15545 . + 0 ID=cds-MDY4307825.1;Parent=gene-SNF32_13490;Dbxref=NCBI_GP:MDY4307825.1;Name=MDY4307825.1;Ontology_term=GO:0006813;gbkey=CDS;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016624078.1;locus_tag=SNF32_13490;product=TrkA family potassium uptake protein;protein_id=MDY4307825.1;transl_table=11 JAXGFV010000043.1 Genbank gene 15561 15863 . + . ID=gene-SNF32_13495;Name=SNF32_13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13495 JAXGFV010000043.1 Protein Homology CDS 15561 15863 . + 0 ID=cds-MDY4307826.1;Parent=gene-SNF32_13495;Dbxref=NCBI_GP:MDY4307826.1;Name=MDY4307826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723155.1;locus_tag=SNF32_13495;product=iron-sulfur cluster biosynthesis protein;protein_id=MDY4307826.1;transl_table=11 JAXGFV010000043.1 Genbank pseudogene 16057 17024 . + . ID=gene-SNF32_13500;Name=SNF32_13500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13500;pseudo=true JAXGFV010000043.1 Protein Homology CDS 16057 17024 . + 0 ID=cds-SNF32_13500;Parent=gene-SNF32_13500;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002368530.1;locus_tag=SNF32_13500;product=phosphoglycerate dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000043.1 Genbank pseudogene 17080 17885 . - . ID=gene-SNF32_13505;Name=SNF32_13505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13505;pseudo=true JAXGFV010000043.1 Protein Homology CDS 17080 17885 . - 0 ID=cds-SNF32_13505;Parent=gene-SNF32_13505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723153.1;locus_tag=SNF32_13505;product=DUF1189 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000043.1 Genbank pseudogene 18074 18546 . + . ID=gene-SNF32_13510;Name=SNF32_13510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13510;pseudo=true JAXGFV010000043.1 Protein Homology CDS 18074 18546 . + 0 ID=cds-SNF32_13510;Parent=gene-SNF32_13510;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735912.1;locus_tag=SNF32_13510;product=GtrA family protein;pseudo=true;transl_table=11 JAXGFV010000043.1 Genbank pseudogene 18627 19228 . + . ID=gene-SNF32_13515;Name=SNF32_13515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13515;pseudo=true JAXGFV010000043.1 Protein Homology CDS 18627 19228 . + 0 ID=cds-SNF32_13515;Parent=gene-SNF32_13515;Note=frameshifted;Ontology_term=GO:0004784,GO:0046872;gbkey=CDS;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735911.1;locus_tag=SNF32_13515;product=superoxide dismutase;pseudo=true;transl_table=11 JAXGFV010000043.1 Genbank gene 19356 19556 . + . ID=gene-SNF32_13520;Name=SNF32_13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13520 JAXGFV010000043.1 Protein Homology CDS 19356 19556 . + 0 ID=cds-MDY4307827.1;Parent=gene-SNF32_13520;Dbxref=NCBI_GP:MDY4307827.1;Name=MDY4307827.1;Ontology_term=GO:0001072,GO:0003676,GO:0003723,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,nucleic acid binding|0003676||IEA,RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003230776.1;locus_tag=SNF32_13520;product=cold-shock protein;protein_id=MDY4307827.1;transl_table=11 JAXGFV010000043.1 Genbank gene 19898 20206 . - . ID=gene-SNF32_13525;Name=SNF32_13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13525 JAXGFV010000043.1 GeneMarkS-2+ CDS 19898 20206 . - 0 ID=cds-MDY4307828.1;Parent=gene-SNF32_13525;Dbxref=NCBI_GP:MDY4307828.1;Name=MDY4307828.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13525;product=hypothetical protein;protein_id=MDY4307828.1;transl_table=11 JAXGFV010000043.1 Genbank gene 20203 20634 . - . ID=gene-SNF32_13530;Name=SNF32_13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13530 JAXGFV010000043.1 GeneMarkS-2+ CDS 20203 20634 . - 0 ID=cds-MDY4307829.1;Parent=gene-SNF32_13530;Dbxref=NCBI_GP:MDY4307829.1;Name=MDY4307829.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13530;product=hypothetical protein;protein_id=MDY4307829.1;transl_table=11 JAXGFV010000043.1 Genbank pseudogene 21630 23049 . + . ID=gene-SNF32_13535;Name=SNF32_13535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13535;pseudo=true JAXGFV010000043.1 Protein Homology CDS 21630 23049 . + 0 ID=cds-SNF32_13535;Parent=gene-SNF32_13535;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016249997.1;locus_tag=SNF32_13535;product=adhesive domain-containing protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000044.1 1 22091 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000044.1 Genbank region 1 22091 . + . ID=JAXGFV010000044.1:1..22091;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000044.1 Genbank pseudogene 587 866 . - . ID=gene-SNF32_13540;Name=SNF32_13540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13540;pseudo=true JAXGFV010000044.1 Protein Homology CDS 587 866 . - 0 ID=cds-SNF32_13540;Parent=gene-SNF32_13540;Note=frameshifted;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875251.1;locus_tag=SNF32_13540;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;pseudo=true;transl_table=11 JAXGFV010000044.1 Genbank gene 1527 2252 . - . ID=gene-SNF32_13545;Name=SNF32_13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13545 JAXGFV010000044.1 Protein Homology CDS 1527 2252 . - 0 ID=cds-MDY4307830.1;Parent=gene-SNF32_13545;Dbxref=NCBI_GP:MDY4307830.1;Name=MDY4307830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016609823.1;locus_tag=SNF32_13545;product=DNA/RNA non-specific endonuclease;protein_id=MDY4307830.1;transl_table=11 JAXGFV010000044.1 Genbank gene 2354 2992 . - . ID=gene-SNF32_13550;Name=SNF32_13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13550 JAXGFV010000044.1 Protein Homology CDS 2354 2992 . - 0 ID=cds-MDY4307831.1;Parent=gene-SNF32_13550;Dbxref=NCBI_GP:MDY4307831.1;Name=MDY4307831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010012270.1;locus_tag=SNF32_13550;product=Fic family protein;protein_id=MDY4307831.1;transl_table=11 JAXGFV010000044.1 Genbank gene 3333 3539 . - . ID=gene-SNF32_13555;Name=SNF32_13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13555 JAXGFV010000044.1 GeneMarkS-2+ CDS 3333 3539 . - 0 ID=cds-MDY4307832.1;Parent=gene-SNF32_13555;Dbxref=NCBI_GP:MDY4307832.1;Name=MDY4307832.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13555;product=hypothetical protein;protein_id=MDY4307832.1;transl_table=11 JAXGFV010000044.1 Genbank gene 3574 3762 . - . ID=gene-SNF32_13560;Name=SNF32_13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13560 JAXGFV010000044.1 Protein Homology CDS 3574 3762 . - 0 ID=cds-MDY4307833.1;Parent=gene-SNF32_13560;Dbxref=NCBI_GP:MDY4307833.1;Name=MDY4307833.1;Ontology_term=GO:0003729;gbkey=CDS;go_function=mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734231.1;locus_tag=SNF32_13560;product=type II toxin-antitoxin system HicA family toxin;protein_id=MDY4307833.1;transl_table=11 JAXGFV010000044.1 Genbank gene 4000 4395 . - . ID=gene-SNF32_13565;Name=SNF32_13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13565 JAXGFV010000044.1 GeneMarkS-2+ CDS 4000 4395 . - 0 ID=cds-MDY4307834.1;Parent=gene-SNF32_13565;Dbxref=NCBI_GP:MDY4307834.1;Name=MDY4307834.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13565;product=hypothetical protein;protein_id=MDY4307834.1;transl_table=11 JAXGFV010000044.1 Genbank gene 4485 5114 . - . ID=gene-SNF32_13570;Name=SNF32_13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13570 JAXGFV010000044.1 Protein Homology CDS 4485 5114 . - 0 ID=cds-MDY4307835.1;Parent=gene-SNF32_13570;Dbxref=NCBI_GP:MDY4307835.1;Name=MDY4307835.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015397.3;locus_tag=SNF32_13570;product=relaxase/mobilization nuclease domain-containing protein;protein_id=MDY4307835.1;transl_table=11 JAXGFV010000044.1 Genbank gene 5179 5325 . - . ID=gene-SNF32_13575;Name=SNF32_13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13575 JAXGFV010000044.1 GeneMarkS-2+ CDS 5179 5325 . - 0 ID=cds-MDY4307836.1;Parent=gene-SNF32_13575;Dbxref=NCBI_GP:MDY4307836.1;Name=MDY4307836.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13575;product=hypothetical protein;protein_id=MDY4307836.1;transl_table=11 JAXGFV010000044.1 Genbank gene 5327 5734 . - . ID=gene-SNF32_13580;Name=mobC;gbkey=Gene;gene=mobC;gene_biotype=protein_coding;locus_tag=SNF32_13580 JAXGFV010000044.1 Protein Homology CDS 5327 5734 . - 0 ID=cds-MDY4307837.1;Parent=gene-SNF32_13580;Dbxref=NCBI_GP:MDY4307837.1;Name=MDY4307837.1;gbkey=CDS;gene=mobC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016621756.1;locus_tag=SNF32_13580;product=plasmid mobilization relaxosome protein MobC;protein_id=MDY4307837.1;transl_table=11 JAXGFV010000044.1 Genbank gene 5876 6229 . - . ID=gene-SNF32_13585;Name=SNF32_13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13585 JAXGFV010000044.1 GeneMarkS-2+ CDS 5876 6229 . - 0 ID=cds-MDY4307838.1;Parent=gene-SNF32_13585;Dbxref=NCBI_GP:MDY4307838.1;Name=MDY4307838.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13585;product=hypothetical protein;protein_id=MDY4307838.1;transl_table=11 JAXGFV010000044.1 Genbank gene 6275 6508 . - . ID=gene-SNF32_13590;Name=SNF32_13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13590 JAXGFV010000044.1 GeneMarkS-2+ CDS 6275 6508 . - 0 ID=cds-MDY4307839.1;Parent=gene-SNF32_13590;Dbxref=NCBI_GP:MDY4307839.1;Name=MDY4307839.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13590;product=hypothetical protein;protein_id=MDY4307839.1;transl_table=11 JAXGFV010000044.1 Genbank gene 6532 7044 . - . ID=gene-SNF32_13595;Name=SNF32_13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13595 JAXGFV010000044.1 GeneMarkS-2+ CDS 6532 7044 . - 0 ID=cds-MDY4307840.1;Parent=gene-SNF32_13595;Dbxref=NCBI_GP:MDY4307840.1;Name=MDY4307840.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13595;product=hypothetical protein;protein_id=MDY4307840.1;transl_table=11 JAXGFV010000044.1 Genbank gene 7550 8056 . - . ID=gene-SNF32_13600;Name=SNF32_13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13600 JAXGFV010000044.1 GeneMarkS-2+ CDS 7550 8056 . - 0 ID=cds-MDY4307841.1;Parent=gene-SNF32_13600;Dbxref=NCBI_GP:MDY4307841.1;Name=MDY4307841.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13600;product=hypothetical protein;protein_id=MDY4307841.1;transl_table=11 JAXGFV010000044.1 Genbank pseudogene 8448 9347 . - . ID=gene-SNF32_13605;Name=SNF32_13605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13605;pseudo=true JAXGFV010000044.1 Protein Homology CDS 8448 9347 . - 0 ID=cds-SNF32_13605;Parent=gene-SNF32_13605;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002343466.1;locus_tag=SNF32_13605;product=replication initiator protein A;pseudo=true;transl_table=11 JAXGFV010000044.1 Genbank pseudogene 9487 9779 . - . ID=gene-SNF32_13610;Name=SNF32_13610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13610;pseudo=true JAXGFV010000044.1 Protein Homology CDS 9487 9779 . - 0 ID=cds-SNF32_13610;Parent=gene-SNF32_13610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002333827.1;locus_tag=SNF32_13610;product=type III secretion system protein PrgN;pseudo=true;transl_table=11 JAXGFV010000044.1 Genbank pseudogene 9936 11426 . - . ID=gene-SNF32_13615;Name=SNF32_13615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13615;pseudo=true JAXGFV010000044.1 Protein Homology CDS 9936 11426 . - 0 ID=cds-SNF32_13615;Parent=gene-SNF32_13615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000947690.1;locus_tag=SNF32_13615;product=primase C-terminal domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000044.1 Genbank gene 11963 12289 . - . ID=gene-SNF32_13620;Name=SNF32_13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13620 JAXGFV010000044.1 Protein Homology CDS 11963 12289 . - 0 ID=cds-MDY4307842.1;Parent=gene-SNF32_13620;Dbxref=NCBI_GP:MDY4307842.1;Name=MDY4307842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002300090.1;locus_tag=SNF32_13620;product=helix-turn-helix transcriptional regulator;protein_id=MDY4307842.1;transl_table=11 JAXGFV010000044.1 Genbank gene 12680 12895 . + . ID=gene-SNF32_13625;Name=SNF32_13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13625 JAXGFV010000044.1 Protein Homology CDS 12680 12895 . + 0 ID=cds-MDY4307843.1;Parent=gene-SNF32_13625;Dbxref=NCBI_GP:MDY4307843.1;Name=MDY4307843.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF025001.3;locus_tag=SNF32_13625;product=ParA family protein;protein_id=MDY4307843.1;transl_table=11 JAXGFV010000044.1 Genbank gene 13228 13641 . + . ID=gene-SNF32_13630;Name=SNF32_13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13630 JAXGFV010000044.1 Protein Homology CDS 13228 13641 . + 0 ID=cds-MDY4307844.1;Parent=gene-SNF32_13630;Dbxref=NCBI_GP:MDY4307844.1;Name=MDY4307844.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025001.3;locus_tag=SNF32_13630;product=hypothetical protein;protein_id=MDY4307844.1;transl_table=11 JAXGFV010000044.1 Genbank gene 13917 14150 . + . ID=gene-SNF32_13635;Name=SNF32_13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13635 JAXGFV010000044.1 GeneMarkS-2+ CDS 13917 14150 . + 0 ID=cds-MDY4307845.1;Parent=gene-SNF32_13635;Dbxref=NCBI_GP:MDY4307845.1;Name=MDY4307845.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13635;product=hypothetical protein;protein_id=MDY4307845.1;transl_table=11 JAXGFV010000044.1 Genbank gene 14759 15013 . + . ID=gene-SNF32_13640;Name=SNF32_13640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13640 JAXGFV010000044.1 Protein Homology CDS 14759 15013 . + 0 ID=cds-MDY4307846.1;Parent=gene-SNF32_13640;Dbxref=NCBI_GP:MDY4307846.1;Name=MDY4307846.1;Ontology_term=GO:0006974,GO:0018142,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA damage response|0006974||IEA,protein-DNA covalent cross-linking|0018142||IEA;inference=COORDINATES: protein motif:HMM:NF014626.3;locus_tag=SNF32_13640;product=SOS response-associated peptidase family protein;protein_id=MDY4307846.1;transl_table=11 JAXGFV010000044.1 Genbank pseudogene 15449 16532 . - . ID=gene-SNF32_13645;Name=xerS;gbkey=Gene;gene=xerS;gene_biotype=pseudogene;locus_tag=SNF32_13645;pseudo=true JAXGFV010000044.1 Protein Homology CDS 15449 16532 . - 0 ID=cds-SNF32_13645;Parent=gene-SNF32_13645;Note=frameshifted;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;gene=xerS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010757124.1;locus_tag=SNF32_13645;product=tyrosine recombinase XerS;pseudo=true;transl_table=11 JAXGFV010000044.1 Genbank pseudogene 16761 16992 . + . ID=gene-SNF32_13650;Name=SNF32_13650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13650;pseudo=true JAXGFV010000044.1 Protein Homology CDS 16761 16992 . + 0 ID=cds-SNF32_13650;Parent=gene-SNF32_13650;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002290351.1;locus_tag=SNF32_13650;product=addiction module antitoxin;pseudo=true;transl_table=11 JAXGFV010000044.1 Genbank pseudogene 16989 17394 . + . ID=gene-SNF32_13655;Name=SNF32_13655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13655;pseudo=true JAXGFV010000044.1 Protein Homology CDS 16989 17394 . + 0 ID=cds-SNF32_13655;Parent=gene-SNF32_13655;Note=frameshifted;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002307501.1;locus_tag=SNF32_13655;product=type II toxin-antitoxin system death-on-curing family toxin;pseudo=true;transl_table=11 JAXGFV010000044.1 Genbank gene 17938 18612 . - . ID=gene-SNF32_13660;Name=SNF32_13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13660 JAXGFV010000044.1 Protein Homology CDS 17938 18612 . - 0 ID=cds-MDY4307847.1;Parent=gene-SNF32_13660;Dbxref=NCBI_GP:MDY4307847.1;Name=MDY4307847.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025108.3;locus_tag=SNF32_13660;product=WxL domain-containing protein;protein_id=MDY4307847.1;transl_table=11 JAXGFV010000044.1 Genbank gene 18549 19139 . - . ID=gene-SNF32_13665;Name=SNF32_13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13665 JAXGFV010000044.1 GeneMarkS-2+ CDS 18549 19139 . - 0 ID=cds-MDY4307848.1;Parent=gene-SNF32_13665;Dbxref=NCBI_GP:MDY4307848.1;Name=MDY4307848.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13665;product=hypothetical protein;protein_id=MDY4307848.1;transl_table=11 JAXGFV010000044.1 Genbank gene 19662 20207 . - . ID=gene-SNF32_13670;Name=SNF32_13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13670 JAXGFV010000044.1 GeneMarkS-2+ CDS 19662 20207 . - 0 ID=cds-MDY4307849.1;Parent=gene-SNF32_13670;Dbxref=NCBI_GP:MDY4307849.1;Name=MDY4307849.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13670;product=hypothetical protein;protein_id=MDY4307849.1;transl_table=11 JAXGFV010000044.1 Genbank gene 20204 20494 . - . ID=gene-SNF32_13675;Name=SNF32_13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13675 JAXGFV010000044.1 GeneMarkS-2+ CDS 20204 20494 . - 0 ID=cds-MDY4307850.1;Parent=gene-SNF32_13675;Dbxref=NCBI_GP:MDY4307850.1;Name=MDY4307850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13675;product=hypothetical protein;protein_id=MDY4307850.1;transl_table=11 JAXGFV010000044.1 Genbank gene 20872 22091 . - . ID=gene-SNF32_13680;Name=SNF32_13680;end_range=22091,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13680;partial=true JAXGFV010000044.1 GeneMarkS-2+ CDS 20872 22091 . - 2 ID=cds-MDY4307851.1;Parent=gene-SNF32_13680;Dbxref=NCBI_GP:MDY4307851.1;Name=MDY4307851.1;end_range=22091,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13680;partial=true;product=hypothetical protein;protein_id=MDY4307851.1;transl_table=11 ##sequence-region JAXGFV010000045.1 1 21457 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000045.1 Genbank region 1 21457 . + . ID=JAXGFV010000045.1:1..21457;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000045.1 Genbank pseudogene 163 626 . + . ID=gene-SNF32_13685;Name=SNF32_13685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13685;pseudo=true JAXGFV010000045.1 Protein Homology CDS 163 626 . + 0 ID=cds-SNF32_13685;Parent=gene-SNF32_13685;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002312882.1;locus_tag=SNF32_13685;product=CtsR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000045.1 Genbank pseudogene 634 3102 . + . ID=gene-SNF32_13690;Name=SNF32_13690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13690;pseudo=true JAXGFV010000045.1 Protein Homology CDS 634 3102 . + 0 ID=cds-SNF32_13690;Parent=gene-SNF32_13690;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008381720.1;locus_tag=SNF32_13690;product=ATP-dependent Clp protease ATP-binding subunit;pseudo=true;transl_table=11 JAXGFV010000045.1 Genbank pseudogene 3340 4260 . + . ID=gene-SNF32_13695;Name=SNF32_13695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13695;pseudo=true JAXGFV010000045.1 Protein Homology CDS 3340 4260 . + 0 ID=cds-SNF32_13695;Parent=gene-SNF32_13695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016922287.1;locus_tag=SNF32_13695;product=peptidase U32 family protein;pseudo=true;transl_table=11 JAXGFV010000045.1 Genbank gene 4279 5520 . + . ID=gene-SNF32_13700;Name=SNF32_13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13700 JAXGFV010000045.1 Protein Homology CDS 4279 5520 . + 0 ID=cds-MDY4307852.1;Parent=gene-SNF32_13700;Dbxref=NCBI_GP:MDY4307852.1;Name=MDY4307852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723386.1;locus_tag=SNF32_13700;product=U32 family peptidase;protein_id=MDY4307852.1;transl_table=11 JAXGFV010000045.1 Genbank pseudogene 5664 7007 . + . ID=gene-SNF32_13705;Name=gor;gbkey=Gene;gene=gor;gene_biotype=pseudogene;locus_tag=SNF32_13705;pseudo=true JAXGFV010000045.1 Protein Homology CDS 5664 7007 . + 0 ID=cds-SNF32_13705;Parent=gene-SNF32_13705;Note=frameshifted;Ontology_term=GO:0045454,GO:0004362;gbkey=CDS;gene=gor;go_function=glutathione-disulfide reductase (NADP) activity|0004362||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002376012.1;locus_tag=SNF32_13705;product=glutathione-disulfide reductase;pseudo=true;transl_table=11 JAXGFV010000045.1 Genbank gene 7233 7619 . - . ID=gene-SNF32_13710;Name=SNF32_13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13710 JAXGFV010000045.1 GeneMarkS-2+ CDS 7233 7619 . - 0 ID=cds-MDY4307853.1;Parent=gene-SNF32_13710;Dbxref=NCBI_GP:MDY4307853.1;Name=MDY4307853.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13710;product=hypothetical protein;protein_id=MDY4307853.1;transl_table=11 JAXGFV010000045.1 Genbank gene 7922 8386 . - . ID=gene-SNF32_13715;Name=SNF32_13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13715 JAXGFV010000045.1 Protein Homology CDS 7922 8386 . - 0 ID=cds-MDY4307854.1;Parent=gene-SNF32_13715;Dbxref=NCBI_GP:MDY4307854.1;Name=MDY4307854.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016901.3;locus_tag=SNF32_13715;product=helix-turn-helix domain-containing protein;protein_id=MDY4307854.1;transl_table=11 JAXGFV010000045.1 Genbank pseudogene 8905 10319 . + . ID=gene-SNF32_13720;Name=SNF32_13720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13720;pseudo=true JAXGFV010000045.1 Protein Homology CDS 8905 10319 . + 0 ID=cds-SNF32_13720;Parent=gene-SNF32_13720;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723389.1;locus_tag=SNF32_13720;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000045.1 Genbank gene 10592 10813 . + . ID=gene-SNF32_13725;Name=SNF32_13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13725 JAXGFV010000045.1 GeneMarkS-2+ CDS 10592 10813 . + 0 ID=cds-MDY4307855.1;Parent=gene-SNF32_13725;Dbxref=NCBI_GP:MDY4307855.1;Name=MDY4307855.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13725;product=hypothetical protein;protein_id=MDY4307855.1;transl_table=11 JAXGFV010000045.1 Genbank gene 10846 11025 . + . ID=gene-SNF32_13730;Name=SNF32_13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13730 JAXGFV010000045.1 GeneMarkS-2+ CDS 10846 11025 . + 0 ID=cds-MDY4307856.1;Parent=gene-SNF32_13730;Dbxref=NCBI_GP:MDY4307856.1;Name=MDY4307856.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13730;product=hypothetical protein;protein_id=MDY4307856.1;transl_table=11 JAXGFV010000045.1 Genbank gene 11368 11994 . + . ID=gene-SNF32_13735;Name=SNF32_13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13735 JAXGFV010000045.1 GeneMarkS-2+ CDS 11368 11994 . + 0 ID=cds-MDY4307857.1;Parent=gene-SNF32_13735;Dbxref=NCBI_GP:MDY4307857.1;Name=MDY4307857.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13735;product=hypothetical protein;protein_id=MDY4307857.1;transl_table=11 JAXGFV010000045.1 Genbank gene 12082 12390 . + . ID=gene-SNF32_13740;Name=SNF32_13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13740 JAXGFV010000045.1 GeneMarkS-2+ CDS 12082 12390 . + 0 ID=cds-MDY4307858.1;Parent=gene-SNF32_13740;Dbxref=NCBI_GP:MDY4307858.1;Name=MDY4307858.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13740;product=hypothetical protein;protein_id=MDY4307858.1;transl_table=11 JAXGFV010000045.1 Genbank gene 12380 12952 . + . ID=gene-SNF32_13745;Name=SNF32_13745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13745 JAXGFV010000045.1 GeneMarkS-2+ CDS 12380 12952 . + 0 ID=cds-MDY4307859.1;Parent=gene-SNF32_13745;Dbxref=NCBI_GP:MDY4307859.1;Name=MDY4307859.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13745;product=hypothetical protein;protein_id=MDY4307859.1;transl_table=11 JAXGFV010000045.1 Genbank gene 12964 13218 . + . ID=gene-SNF32_13750;Name=SNF32_13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13750 JAXGFV010000045.1 GeneMarkS-2+ CDS 12964 13218 . + 0 ID=cds-MDY4307860.1;Parent=gene-SNF32_13750;Dbxref=NCBI_GP:MDY4307860.1;Name=MDY4307860.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13750;product=hypothetical protein;protein_id=MDY4307860.1;transl_table=11 JAXGFV010000045.1 Genbank gene 13355 13645 . + . ID=gene-SNF32_13755;Name=SNF32_13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13755 JAXGFV010000045.1 GeneMarkS-2+ CDS 13355 13645 . + 0 ID=cds-MDY4307861.1;Parent=gene-SNF32_13755;Dbxref=NCBI_GP:MDY4307861.1;Name=MDY4307861.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13755;product=hypothetical protein;protein_id=MDY4307861.1;transl_table=11 JAXGFV010000045.1 Genbank pseudogene 13699 15391 . + . ID=gene-SNF32_13760;Name=SNF32_13760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13760;pseudo=true JAXGFV010000045.1 Protein Homology CDS 13699 15391 . + 0 ID=cds-SNF32_13760;Parent=gene-SNF32_13760;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722810.1;locus_tag=SNF32_13760;product=type IV secretory system conjugative DNA transfer family protein;pseudo=true;transl_table=11 JAXGFV010000045.1 Genbank gene 15802 16029 . + . ID=gene-SNF32_13765;Name=SNF32_13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13765 JAXGFV010000045.1 Protein Homology CDS 15802 16029 . + 0 ID=cds-MDY4307862.1;Parent=gene-SNF32_13765;Dbxref=NCBI_GP:MDY4307862.1;Name=MDY4307862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002310588.1;locus_tag=SNF32_13765;product=hypothetical protein;protein_id=MDY4307862.1;transl_table=11 JAXGFV010000045.1 Genbank pseudogene 16063 16885 . + . ID=gene-SNF32_13770;Name=SNF32_13770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13770;pseudo=true JAXGFV010000045.1 Protein Homology CDS 16063 16885 . + 0 ID=cds-SNF32_13770;Parent=gene-SNF32_13770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002310587.1;locus_tag=SNF32_13770;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000045.1 Genbank gene 16895 17245 . + . ID=gene-SNF32_13775;Name=SNF32_13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13775 JAXGFV010000045.1 Protein Homology CDS 16895 17245 . + 0 ID=cds-MDY4307863.1;Parent=gene-SNF32_13775;Dbxref=NCBI_GP:MDY4307863.1;Name=MDY4307863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002310586.1;locus_tag=SNF32_13775;product=PrgI family protein;protein_id=MDY4307863.1;transl_table=11 JAXGFV010000045.1 Genbank pseudogene 17242 19576 . + . ID=gene-SNF32_13780;Name=SNF32_13780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13780;pseudo=true JAXGFV010000045.1 Protein Homology CDS 17242 19576 . + 0 ID=cds-SNF32_13780;Parent=gene-SNF32_13780;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002346218.1;locus_tag=SNF32_13780;product=ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000045.1 Genbank gene 19755 20150 . + . ID=gene-SNF32_13785;Name=SNF32_13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13785 JAXGFV010000045.1 GeneMarkS-2+ CDS 19755 20150 . + 0 ID=cds-MDY4307864.1;Parent=gene-SNF32_13785;Dbxref=NCBI_GP:MDY4307864.1;Name=MDY4307864.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13785;product=hypothetical protein;protein_id=MDY4307864.1;transl_table=11 JAXGFV010000045.1 Genbank gene 20433 20603 . + . ID=gene-SNF32_13790;Name=SNF32_13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13790 JAXGFV010000045.1 GeneMarkS-2+ CDS 20433 20603 . + 0 ID=cds-MDY4307865.1;Parent=gene-SNF32_13790;Dbxref=NCBI_GP:MDY4307865.1;Name=MDY4307865.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13790;product=hypothetical protein;protein_id=MDY4307865.1;transl_table=11 JAXGFV010000045.1 Genbank gene 20600 20917 . + . ID=gene-SNF32_13795;Name=SNF32_13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13795 JAXGFV010000045.1 GeneMarkS-2+ CDS 20600 20917 . + 0 ID=cds-MDY4307866.1;Parent=gene-SNF32_13795;Dbxref=NCBI_GP:MDY4307866.1;Name=MDY4307866.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13795;product=hypothetical protein;protein_id=MDY4307866.1;transl_table=11 JAXGFV010000045.1 Genbank gene 20991 21170 . + . ID=gene-SNF32_13800;Name=SNF32_13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13800 JAXGFV010000045.1 GeneMarkS-2+ CDS 20991 21170 . + 0 ID=cds-MDY4307867.1;Parent=gene-SNF32_13800;Dbxref=NCBI_GP:MDY4307867.1;Name=MDY4307867.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13800;product=hypothetical protein;protein_id=MDY4307867.1;transl_table=11 JAXGFV010000045.1 Genbank gene 21146 21457 . + . ID=gene-SNF32_13805;Name=SNF32_13805;end_range=21457,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13805;partial=true JAXGFV010000045.1 GeneMarkS-2+ CDS 21146 21457 . + 0 ID=cds-MDY4307868.1;Parent=gene-SNF32_13805;Dbxref=NCBI_GP:MDY4307868.1;Name=MDY4307868.1;end_range=21457,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13805;partial=true;product=hypothetical protein;protein_id=MDY4307868.1;transl_table=11 ##sequence-region JAXGFV010000046.1 1 21429 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000046.1 Genbank region 1 21429 . + . ID=JAXGFV010000046.1:1..21429;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000046.1 Genbank gene 19 234 . - . ID=gene-SNF32_13810;Name=SNF32_13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13810 JAXGFV010000046.1 Protein Homology CDS 19 234 . - 0 ID=cds-MDY4307869.1;Parent=gene-SNF32_13810;Dbxref=NCBI_GP:MDY4307869.1;Name=MDY4307869.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018224.3;locus_tag=SNF32_13810;product=DUF1093 domain-containing protein;protein_id=MDY4307869.1;transl_table=11 JAXGFV010000046.1 Genbank pseudogene 809 2686 . + . ID=gene-SNF32_13815;Name=SNF32_13815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13815;pseudo=true JAXGFV010000046.1 Protein Homology CDS 809 2686 . + 0 ID=cds-SNF32_13815;Parent=gene-SNF32_13815;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177286.1;locus_tag=SNF32_13815;product=endonuclease MutS2;pseudo=true;transl_table=11 JAXGFV010000046.1 Genbank gene 2841 3392 . + . ID=gene-SNF32_13820;Name=SNF32_13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13820 JAXGFV010000046.1 Protein Homology CDS 2841 3392 . + 0 ID=cds-MDY4307870.1;Parent=gene-SNF32_13820;Dbxref=NCBI_GP:MDY4307870.1;Name=MDY4307870.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723866.1;locus_tag=SNF32_13820;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=MDY4307870.1;transl_table=11 JAXGFV010000046.1 Genbank gene 3764 4135 . + . ID=gene-SNF32_13825;Name=SNF32_13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13825 JAXGFV010000046.1 Protein Homology CDS 3764 4135 . + 0 ID=cds-MDY4307871.1;Parent=gene-SNF32_13825;Dbxref=NCBI_GP:MDY4307871.1;Name=MDY4307871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736406.1;locus_tag=SNF32_13825;product=hypothetical protein;protein_id=MDY4307871.1;transl_table=11 JAXGFV010000046.1 Genbank gene 5002 5208 . - . ID=gene-SNF32_13830;Name=SNF32_13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13830 JAXGFV010000046.1 GeneMarkS-2+ CDS 5002 5208 . - 0 ID=cds-MDY4307872.1;Parent=gene-SNF32_13830;Dbxref=NCBI_GP:MDY4307872.1;Name=MDY4307872.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13830;product=hypothetical protein;protein_id=MDY4307872.1;transl_table=11 JAXGFV010000046.1 Genbank gene 5202 5315 . - . ID=gene-SNF32_13835;Name=SNF32_13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13835 JAXGFV010000046.1 Protein Homology CDS 5202 5315 . - 0 ID=cds-MDY4307873.1;Parent=gene-SNF32_13835;Dbxref=NCBI_GP:MDY4307873.1;Name=MDY4307873.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024804.3;locus_tag=SNF32_13835;product=LacI family DNA-binding transcriptional regulator;protein_id=MDY4307873.1;transl_table=11 JAXGFV010000046.1 Genbank gene 5416 5694 . + . ID=gene-SNF32_13840;Name=SNF32_13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13840 JAXGFV010000046.1 Protein Homology CDS 5416 5694 . + 0 ID=cds-MDY4307874.1;Parent=gene-SNF32_13840;Dbxref=NCBI_GP:MDY4307874.1;Name=MDY4307874.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019887.3;locus_tag=SNF32_13840;product=HAD hydrolase family protein;protein_id=MDY4307874.1;transl_table=11 JAXGFV010000046.1 Genbank pseudogene 5718 6229 . + . ID=gene-SNF32_13845;Name=SNF32_13845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13845;pseudo=true JAXGFV010000046.1 Protein Homology CDS 5718 6229 . + 0 ID=cds-SNF32_13845;Parent=gene-SNF32_13845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019887.3;locus_tag=SNF32_13845;product=HAD hydrolase family protein;pseudo=true;transl_table=11 JAXGFV010000046.1 Genbank pseudogene 6365 6652 . - . ID=gene-SNF32_13850;Name=SNF32_13850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13850;pseudo=true JAXGFV010000046.1 Protein Homology CDS 6365 6652 . - 0 ID=cds-SNF32_13850;Parent=gene-SNF32_13850;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002292566.1;locus_tag=SNF32_13850;product=metal-sensitive transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000046.1 Genbank pseudogene 6815 7131 . + . ID=gene-SNF32_13855;Name=SNF32_13855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13855;pseudo=true JAXGFV010000046.1 Protein Homology CDS 6815 7131 . + 0 ID=cds-SNF32_13855;Parent=gene-SNF32_13855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010730940.1;locus_tag=SNF32_13855;product=rhodanese-like domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000046.1 Genbank pseudogene 7134 8785 . + . ID=gene-SNF32_13860;Name=SNF32_13860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13860;pseudo=true JAXGFV010000046.1 Protein Homology CDS 7134 8785 . + 0 ID=cds-SNF32_13860;Parent=gene-SNF32_13860;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722740.1;locus_tag=SNF32_13860;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11 JAXGFV010000046.1 Genbank gene 8904 9404 . + . ID=gene-SNF32_13865;Name=SNF32_13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13865 JAXGFV010000046.1 GeneMarkS-2+ CDS 8904 9404 . + 0 ID=cds-MDY4307875.1;Parent=gene-SNF32_13865;Dbxref=NCBI_GP:MDY4307875.1;Name=MDY4307875.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13865;product=hypothetical protein;protein_id=MDY4307875.1;transl_table=11 JAXGFV010000046.1 Genbank gene 9443 9871 . + . ID=gene-SNF32_13870;Name=SNF32_13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13870 JAXGFV010000046.1 GeneMarkS-2+ CDS 9443 9871 . + 0 ID=cds-MDY4307876.1;Parent=gene-SNF32_13870;Dbxref=NCBI_GP:MDY4307876.1;Name=MDY4307876.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13870;product=hypothetical protein;protein_id=MDY4307876.1;transl_table=11 JAXGFV010000046.1 Genbank pseudogene 10069 12058 . + . ID=gene-SNF32_13875;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=pseudogene;locus_tag=SNF32_13875;pseudo=true JAXGFV010000046.1 Protein Homology CDS 10069 12058 . + 0 ID=cds-SNF32_13875;Parent=gene-SNF32_13875;Note=frameshifted;Ontology_term=GO:0015572;gbkey=CDS;gene=nagE;go_function=N-acetylglucosamine transmembrane transporter activity|0015572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736399.1;locus_tag=SNF32_13875;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;pseudo=true;transl_table=11 JAXGFV010000046.1 Genbank pseudogene 12135 12454 . - . ID=gene-SNF32_13880;Name=SNF32_13880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13880;pseudo=true JAXGFV010000046.1 Protein Homology CDS 12135 12454 . - 0 ID=cds-SNF32_13880;Parent=gene-SNF32_13880;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736398.1;locus_tag=SNF32_13880;product=heavy metal-binding domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000046.1 Genbank pseudogene 12647 13044 . + . ID=gene-SNF32_13885;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=pseudogene;locus_tag=SNF32_13885;pseudo=true JAXGFV010000046.1 Protein Homology CDS 12647 13044 . + 0 ID=cds-SNF32_13885;Parent=gene-SNF32_13885;Note=frameshifted;Ontology_term=GO:0047324;gbkey=CDS;gene=dhaM;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722736.1;locus_tag=SNF32_13885;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;pseudo=true;transl_table=11 JAXGFV010000046.1 Genbank gene 13045 14028 . + . ID=gene-SNF32_13890;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=SNF32_13890 JAXGFV010000046.1 Protein Homology CDS 13045 14028 . + 0 ID=cds-MDY4307877.1;Parent=gene-SNF32_13890;Dbxref=NCBI_GP:MDY4307877.1;Name=MDY4307877.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010825201.1;locus_tag=SNF32_13890;product=dihydroxyacetone kinase subunit DhaK;protein_id=MDY4307877.1;transl_table=11 JAXGFV010000046.1 Genbank pseudogene 14042 14645 . + . ID=gene-SNF32_13895;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=pseudogene;locus_tag=SNF32_13895;pseudo=true JAXGFV010000046.1 Protein Homology CDS 14042 14645 . + 0 ID=cds-SNF32_13895;Parent=gene-SNF32_13895;Note=frameshifted;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaL;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736395.1;locus_tag=SNF32_13895;product=dihydroxyacetone kinase subunit DhaL;pseudo=true;transl_table=11 JAXGFV010000046.1 Genbank gene 14850 15809 . - . ID=gene-SNF32_13900;Name=SNF32_13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13900 JAXGFV010000046.1 GeneMarkS-2+ CDS 14850 15809 . - 0 ID=cds-MDY4307878.1;Parent=gene-SNF32_13900;Dbxref=NCBI_GP:MDY4307878.1;Name=MDY4307878.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_13900;product=hypothetical protein;protein_id=MDY4307878.1;transl_table=11 JAXGFV010000046.1 cmsearch binding_site 15975 16178 . + . ID=id-JAXGFV010000046.1:15975..16178;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.4 JAXGFV010000046.1 Genbank pseudogene 16274 17255 . + . ID=gene-SNF32_13905;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=pseudogene;locus_tag=SNF32_13905;pseudo=true JAXGFV010000046.1 Protein Homology CDS 16274 17255 . + 0 ID=cds-SNF32_13905;Parent=gene-SNF32_13905;Note=frameshifted;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: protein motif:HMM:NF012788.3;locus_tag=SNF32_13905;product=tyrosine--tRNA ligase;pseudo=true;transl_table=11 JAXGFV010000046.1 Genbank gene 17228 17527 . + . ID=gene-SNF32_13910;Name=SNF32_13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13910 JAXGFV010000046.1 Protein Homology CDS 17228 17527 . + 0 ID=cds-MDY4307879.1;Parent=gene-SNF32_13910;Dbxref=NCBI_GP:MDY4307879.1;Name=MDY4307879.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: protein motif:HMM:NF013633.3;locus_tag=SNF32_13910;product=S4 domain-containing protein;protein_id=MDY4307879.1;transl_table=11 JAXGFV010000046.1 Genbank pseudogene 17816 19687 . + . ID=gene-SNF32_13915;Name=tdc;gbkey=Gene;gene=tdc;gene_biotype=pseudogene;locus_tag=SNF32_13915;pseudo=true JAXGFV010000046.1 Protein Homology CDS 17816 19687 . + 0 ID=cds-SNF32_13915;Parent=gene-SNF32_13915;Note=frameshifted;Ontology_term=GO:0006572,GO:0004837;gbkey=CDS;gene=tdc;go_function=tyrosine decarboxylase activity|0004837||IEA;go_process=tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177271.1;locus_tag=SNF32_13915;product=tyrosine decarboxylase;pseudo=true;transl_table=11 JAXGFV010000046.1 Genbank pseudogene 19932 21347 . + . ID=gene-SNF32_13920;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=pseudogene;locus_tag=SNF32_13920;pseudo=true JAXGFV010000046.1 Protein Homology CDS 19932 21347 . + 0 ID=cds-SNF32_13920;Parent=gene-SNF32_13920;Note=frameshifted;Ontology_term=GO:0070908;gbkey=CDS;gene=tyrP;go_function=tyrosine:tyramine antiporter activity|0070908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177272.1;locus_tag=SNF32_13920;product=tyrosine-tyramine antiporter;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000047.1 1 20764 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000047.1 Genbank region 1 20764 . + . ID=JAXGFV010000047.1:1..20764;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000047.1 Genbank pseudogene 237 1080 . + . ID=gene-SNF32_13925;Name=SNF32_13925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13925;pseudo=true JAXGFV010000047.1 Protein Homology CDS 237 1080 . + 0 ID=cds-SNF32_13925;Parent=gene-SNF32_13925;Note=frameshifted;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722474.1;locus_tag=SNF32_13925;product=PRD domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000047.1 Genbank pseudogene 1200 3069 . + . ID=gene-SNF32_13930;Name=SNF32_13930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13930;pseudo=true JAXGFV010000047.1 Protein Homology CDS 1200 3069 . + 0 ID=cds-SNF32_13930;Parent=gene-SNF32_13930;Note=frameshifted;Ontology_term=GO:0009401,GO:0015759,GO:0015573;gbkey=CDS;go_function=beta-glucoside transmembrane transporter activity|0015573||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,beta-glucoside transport|0015759||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002330035.1;locus_tag=SNF32_13930;product=beta-glucoside-specific PTS transporter subunit IIABC;pseudo=true;transl_table=11 JAXGFV010000047.1 Genbank pseudogene 3086 4530 . + . ID=gene-SNF32_13935;Name=SNF32_13935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13935;pseudo=true JAXGFV010000047.1 Protein Homology CDS 3086 4530 . + 0 ID=cds-SNF32_13935;Parent=gene-SNF32_13935;Note=frameshifted;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734697.1;locus_tag=SNF32_13935;product=glycoside hydrolase family 1 protein;pseudo=true;transl_table=11 JAXGFV010000047.1 Genbank pseudogene 4817 5516 . + . ID=gene-SNF32_13940;Name=SNF32_13940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13940;pseudo=true JAXGFV010000047.1 Protein Homology CDS 4817 5516 . + 0 ID=cds-SNF32_13940;Parent=gene-SNF32_13940;Note=frameshifted;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002291138.1;locus_tag=SNF32_13940;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000047.1 Genbank pseudogene 5794 7131 . + . ID=gene-SNF32_13945;Name=SNF32_13945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13945;pseudo=true JAXGFV010000047.1 Protein Homology CDS 5794 7131 . + 0 ID=cds-SNF32_13945;Parent=gene-SNF32_13945;Note=frameshifted;Ontology_term=GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734699.1;locus_tag=SNF32_13945;product=PTS sugar transporter subunit IIC;pseudo=true;transl_table=11 JAXGFV010000047.1 Genbank pseudogene 7156 8242 . + . ID=gene-SNF32_13950;Name=SNF32_13950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13950;pseudo=true JAXGFV010000047.1 Protein Homology CDS 7156 8242 . + 0 ID=cds-SNF32_13950;Parent=gene-SNF32_13950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002308292.1;locus_tag=SNF32_13950;product=MupG family TIM beta-alpha barrel fold protein;pseudo=true;transl_table=11 JAXGFV010000047.1 Genbank pseudogene 8252 9363 . + . ID=gene-SNF32_13955;Name=SNF32_13955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13955;pseudo=true JAXGFV010000047.1 Protein Homology CDS 8252 9363 . + 0 ID=cds-SNF32_13955;Parent=gene-SNF32_13955;Note=frameshifted;Ontology_term=GO:0008150,GO:0003674,GO:0005575;gbkey=CDS;go_component=cellular_component|0005575||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002344525.1;locus_tag=SNF32_13955;product=amidohydrolase/deacetylase family metallohydrolase;pseudo=true;transl_table=11 JAXGFV010000047.1 Genbank pseudogene 9347 10445 . + . ID=gene-SNF32_13960;Name=SNF32_13960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13960;pseudo=true JAXGFV010000047.1 Protein Homology CDS 9347 10445 . + 0 ID=cds-SNF32_13960;Parent=gene-SNF32_13960;Note=frameshifted;Ontology_term=GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734702.1;locus_tag=SNF32_13960;product=DgaE family pyridoxal phosphate-dependent ammonia lyase;pseudo=true;transl_table=11 JAXGFV010000047.1 Genbank pseudogene 10451 11180 . + . ID=gene-SNF32_13965;Name=SNF32_13965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13965;pseudo=true JAXGFV010000047.1 Protein Homology CDS 10451 11180 . + 0 ID=cds-SNF32_13965;Parent=gene-SNF32_13965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002407701.1;locus_tag=SNF32_13965;product=KDGP aldolase family protein;pseudo=true;transl_table=11 JAXGFV010000047.1 Genbank pseudogene 11200 12205 . + . ID=gene-SNF32_13970;Name=SNF32_13970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13970;pseudo=true JAXGFV010000047.1 Protein Homology CDS 11200 12205 . + 0 ID=cds-SNF32_13970;Parent=gene-SNF32_13970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177009.1;locus_tag=SNF32_13970;product=sugar kinase;pseudo=true;transl_table=11 JAXGFV010000047.1 Genbank pseudogene 13020 13600 . + . ID=gene-SNF32_13975;Name=SNF32_13975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13975;pseudo=true JAXGFV010000047.1 Protein Homology CDS 13020 13600 . + 0 ID=cds-SNF32_13975;Parent=gene-SNF32_13975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002333798.1;locus_tag=SNF32_13975;product=TIGR00730 family Rossman fold protein;pseudo=true;transl_table=11 JAXGFV010000047.1 Genbank pseudogene 13600 14039 . + . ID=gene-SNF32_13980;Name=SNF32_13980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13980;pseudo=true JAXGFV010000047.1 Protein Homology CDS 13600 14039 . + 0 ID=cds-SNF32_13980;Parent=gene-SNF32_13980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002318723.1;locus_tag=SNF32_13980;product=nucleoside 2-deoxyribosyltransferase;pseudo=true;transl_table=11 JAXGFV010000047.1 Genbank pseudogene 14056 14768 . + . ID=gene-SNF32_13985;Name=SNF32_13985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13985;pseudo=true JAXGFV010000047.1 Protein Homology CDS 14056 14768 . + 0 ID=cds-SNF32_13985;Parent=gene-SNF32_13985;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734707.1;locus_tag=SNF32_13985;product=deoxynucleoside kinase;pseudo=true;transl_table=11 JAXGFV010000047.1 Genbank gene 14947 15129 . - . ID=gene-SNF32_13990;Name=SNF32_13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_13990 JAXGFV010000047.1 Protein Homology CDS 14947 15129 . - 0 ID=cds-MDY4307880.1;Parent=gene-SNF32_13990;Dbxref=NCBI_GP:MDY4307880.1;Name=MDY4307880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722462.1;locus_tag=SNF32_13990;product=hypothetical protein;protein_id=MDY4307880.1;transl_table=11 JAXGFV010000047.1 Genbank pseudogene 15482 15885 . - . ID=gene-SNF32_13995;Name=SNF32_13995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_13995;pseudo=true JAXGFV010000047.1 Protein Homology CDS 15482 15885 . - 0 ID=cds-SNF32_13995;Parent=gene-SNF32_13995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734709.1;locus_tag=SNF32_13995;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000047.1 Genbank gene 16200 16763 . + . ID=gene-SNF32_14000;Name=SNF32_14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14000 JAXGFV010000047.1 Protein Homology CDS 16200 16763 . + 0 ID=cds-MDY4307881.1;Parent=gene-SNF32_14000;Dbxref=NCBI_GP:MDY4307881.1;Name=MDY4307881.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF012457.3;locus_tag=SNF32_14000;product=family 1 glycosylhydrolase;protein_id=MDY4307881.1;transl_table=11 JAXGFV010000047.1 Genbank pseudogene 16813 17246 . + . ID=gene-SNF32_14005;Name=SNF32_14005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14005;pseudo=true JAXGFV010000047.1 Protein Homology CDS 16813 17246 . + 0 ID=cds-SNF32_14005;Parent=gene-SNF32_14005;Note=frameshifted;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF012457.3;locus_tag=SNF32_14005;product=family 1 glycosylhydrolase;pseudo=true;transl_table=11 JAXGFV010000047.1 Genbank gene 17243 17590 . + . ID=gene-SNF32_14010;Name=SNF32_14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14010 JAXGFV010000047.1 Protein Homology CDS 17243 17590 . + 0 ID=cds-MDY4307882.1;Parent=gene-SNF32_14010;Dbxref=NCBI_GP:MDY4307882.1;Name=MDY4307882.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF012457.3;locus_tag=SNF32_14010;product=family 1 glycosylhydrolase;protein_id=MDY4307882.1;transl_table=11 JAXGFV010000047.1 Genbank pseudogene 17760 18321 . + . ID=gene-SNF32_14015;Name=SNF32_14015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14015;pseudo=true JAXGFV010000047.1 Protein Homology CDS 17760 18321 . + 0 ID=cds-SNF32_14015;Parent=gene-SNF32_14015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734711.1;locus_tag=SNF32_14015;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000047.1 Genbank pseudogene 18622 20707 . + . ID=gene-SNF32_14020;Name=SNF32_14020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14020;pseudo=true JAXGFV010000047.1 Protein Homology CDS 18622 20707 . + 0 ID=cds-SNF32_14020;Parent=gene-SNF32_14020;Note=frameshifted;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722458.1;locus_tag=SNF32_14020;product=LTA synthase family protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000048.1 1 20152 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000048.1 Genbank region 1 20152 . + . ID=JAXGFV010000048.1:1..20152;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000048.1 Genbank gene 1 180 . + . ID=gene-SNF32_14025;Name=SNF32_14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14025;partial=true;start_range=.,1 JAXGFV010000048.1 Protein Homology CDS 1 180 . + 0 ID=cds-MDY4307883.1;Parent=gene-SNF32_14025;Dbxref=NCBI_GP:MDY4307883.1;Name=MDY4307883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002340613.1;locus_tag=SNF32_14025;partial=true;product=hypothetical protein;protein_id=MDY4307883.1;start_range=.,1;transl_table=11 JAXGFV010000048.1 Genbank pseudogene 437 1304 . + . ID=gene-SNF32_14030;Name=SNF32_14030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14030;pseudo=true JAXGFV010000048.1 Protein Homology CDS 437 1304 . + 0 ID=cds-SNF32_14030;Parent=gene-SNF32_14030;Note=frameshifted;Ontology_term=GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016627954.1;locus_tag=SNF32_14030;product=glucosaminidase domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000048.1 Genbank pseudogene 1436 2360 . + . ID=gene-SNF32_14035;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=pseudogene;locus_tag=SNF32_14035;pseudo=true JAXGFV010000048.1 Protein Homology CDS 1436 2360 . + 0 ID=cds-SNF32_14035;Parent=gene-SNF32_14035;Note=frameshifted;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002336979.1;locus_tag=SNF32_14035;product=cysteine synthase A;pseudo=true;transl_table=11 JAXGFV010000048.1 Genbank gene 2540 2992 . + . ID=gene-SNF32_14040;Name=SNF32_14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14040 JAXGFV010000048.1 Protein Homology CDS 2540 2992 . + 0 ID=cds-MDY4307884.1;Parent=gene-SNF32_14040;Dbxref=NCBI_GP:MDY4307884.1;Name=MDY4307884.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002327935.1;locus_tag=SNF32_14040;product=Fur family transcriptional regulator;protein_id=MDY4307884.1;transl_table=11 JAXGFV010000048.1 Genbank pseudogene 3337 4686 . + . ID=gene-SNF32_14045;Name=SNF32_14045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14045;pseudo=true JAXGFV010000048.1 Protein Homology CDS 3337 4686 . + 0 ID=cds-SNF32_14045;Parent=gene-SNF32_14045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002289543.1;locus_tag=SNF32_14045;product=NADH oxidase;pseudo=true;transl_table=11 JAXGFV010000048.1 Genbank gene 4945 5235 . + . ID=gene-SNF32_14050;Name=SNF32_14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14050 JAXGFV010000048.1 Protein Homology CDS 4945 5235 . + 0 ID=cds-MDY4307885.1;Parent=gene-SNF32_14050;Dbxref=NCBI_GP:MDY4307885.1;Name=MDY4307885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002289544.1;locus_tag=SNF32_14050;product=DUF5960 family protein;protein_id=MDY4307885.1;transl_table=11 JAXGFV010000048.1 Genbank pseudogene 5472 6174 . + . ID=gene-SNF32_14055;Name=SNF32_14055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14055;pseudo=true JAXGFV010000048.1 Protein Homology CDS 5472 6174 . + 0 ID=cds-SNF32_14055;Parent=gene-SNF32_14055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002357986.1;locus_tag=SNF32_14055;product=DnaD domain protein;pseudo=true;transl_table=11 JAXGFV010000048.1 Genbank gene 6176 6841 . + . ID=gene-SNF32_14060;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=SNF32_14060 JAXGFV010000048.1 Protein Homology CDS 6176 6841 . + 0 ID=cds-MDY4307886.1;Parent=gene-SNF32_14060;Dbxref=NCBI_GP:MDY4307886.1;Name=MDY4307886.1;Ontology_term=GO:0006281,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735562.1;locus_tag=SNF32_14060;product=endonuclease III;protein_id=MDY4307886.1;transl_table=11 JAXGFV010000048.1 Genbank gene 7352 7885 . + . ID=gene-SNF32_14065;Name=SNF32_14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14065 JAXGFV010000048.1 Protein Homology CDS 7352 7885 . + 0 ID=cds-MDY4307887.1;Parent=gene-SNF32_14065;Dbxref=NCBI_GP:MDY4307887.1;Name=MDY4307887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002314957.1;locus_tag=SNF32_14065;product=hypothetical protein;protein_id=MDY4307887.1;transl_table=11 JAXGFV010000048.1 Genbank gene 8802 9203 . + . ID=gene-SNF32_14070;Name=SNF32_14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14070 JAXGFV010000048.1 Protein Homology CDS 8802 9203 . + 0 ID=cds-MDY4307888.1;Parent=gene-SNF32_14070;Dbxref=NCBI_GP:MDY4307888.1;Name=MDY4307888.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016901.3;locus_tag=SNF32_14070;product=hypothetical protein;protein_id=MDY4307888.1;transl_table=11 JAXGFV010000048.1 Genbank gene 9188 9394 . + . ID=gene-SNF32_14075;Name=SNF32_14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14075 JAXGFV010000048.1 GeneMarkS-2+ CDS 9188 9394 . + 0 ID=cds-MDY4307889.1;Parent=gene-SNF32_14075;Dbxref=NCBI_GP:MDY4307889.1;Name=MDY4307889.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14075;product=hypothetical protein;protein_id=MDY4307889.1;transl_table=11 JAXGFV010000048.1 Genbank pseudogene 10186 11522 . + . ID=gene-SNF32_14080;Name=SNF32_14080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14080;pseudo=true JAXGFV010000048.1 Protein Homology CDS 10186 11522 . + 0 ID=cds-SNF32_14080;Parent=gene-SNF32_14080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735559.1;locus_tag=SNF32_14080;product=lytic polysaccharide monooxygenase;pseudo=true;transl_table=11 JAXGFV010000048.1 Genbank gene 12104 12226 . + . ID=gene-SNF32_14085;Name=SNF32_14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14085 JAXGFV010000048.1 GeneMarkS-2+ CDS 12104 12226 . + 0 ID=cds-MDY4307890.1;Parent=gene-SNF32_14085;Dbxref=NCBI_GP:MDY4307890.1;Name=MDY4307890.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14085;product=hypothetical protein;protein_id=MDY4307890.1;transl_table=11 JAXGFV010000048.1 Genbank gene 12214 13023 . + . ID=gene-SNF32_14090;Name=SNF32_14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14090 JAXGFV010000048.1 GeneMarkS-2+ CDS 12214 13023 . + 0 ID=cds-MDY4307891.1;Parent=gene-SNF32_14090;Dbxref=NCBI_GP:MDY4307891.1;Name=MDY4307891.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14090;product=hypothetical protein;protein_id=MDY4307891.1;transl_table=11 JAXGFV010000048.1 Genbank gene 13116 13322 . + . ID=gene-SNF32_14095;Name=SNF32_14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14095 JAXGFV010000048.1 GeneMarkS-2+ CDS 13116 13322 . + 0 ID=cds-MDY4307892.1;Parent=gene-SNF32_14095;Dbxref=NCBI_GP:MDY4307892.1;Name=MDY4307892.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14095;product=hypothetical protein;protein_id=MDY4307892.1;transl_table=11 JAXGFV010000048.1 Genbank pseudogene 13557 15065 . + . ID=gene-SNF32_14100;Name=SNF32_14100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14100;pseudo=true JAXGFV010000048.1 Protein Homology CDS 13557 15065 . + 0 ID=cds-SNF32_14100;Parent=gene-SNF32_14100;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002346217.1;locus_tag=SNF32_14100;product=type IV secretory system conjugative DNA transfer family protein;pseudo=true;transl_table=11 JAXGFV010000048.1 Genbank gene 15068 15304 . + . ID=gene-SNF32_14105;Name=SNF32_14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14105 JAXGFV010000048.1 Protein Homology CDS 15068 15304 . + 0 ID=cds-MDY4307893.1;Parent=gene-SNF32_14105;Dbxref=NCBI_GP:MDY4307893.1;Name=MDY4307893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735554.1;locus_tag=SNF32_14105;product=hypothetical protein;protein_id=MDY4307893.1;transl_table=11 JAXGFV010000048.1 Genbank gene 15332 15718 . + . ID=gene-SNF32_14110;Name=SNF32_14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14110 JAXGFV010000048.1 GeneMarkS-2+ CDS 15332 15718 . + 0 ID=cds-MDY4307894.1;Parent=gene-SNF32_14110;Dbxref=NCBI_GP:MDY4307894.1;Name=MDY4307894.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14110;product=hypothetical protein;protein_id=MDY4307894.1;transl_table=11 JAXGFV010000048.1 Genbank gene 15900 16025 . + . ID=gene-SNF32_14115;Name=SNF32_14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14115 JAXGFV010000048.1 GeneMarkS-2+ CDS 15900 16025 . + 0 ID=cds-MDY4307895.1;Parent=gene-SNF32_14115;Dbxref=NCBI_GP:MDY4307895.1;Name=MDY4307895.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14115;product=hypothetical protein;protein_id=MDY4307895.1;transl_table=11 JAXGFV010000048.1 Genbank gene 16169 16330 . + . ID=gene-SNF32_14120;Name=SNF32_14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14120 JAXGFV010000048.1 Protein Homology CDS 16169 16330 . + 0 ID=cds-MDY4307896.1;Parent=gene-SNF32_14120;Dbxref=NCBI_GP:MDY4307896.1;Name=MDY4307896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177790.1;locus_tag=SNF32_14120;product=PrgI family protein;protein_id=MDY4307896.1;transl_table=11 JAXGFV010000048.1 Genbank gene 16817 17017 . + . ID=gene-SNF32_14125;Name=SNF32_14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14125 JAXGFV010000048.1 GeneMarkS-2+ CDS 16817 17017 . + 0 ID=cds-MDY4307897.1;Parent=gene-SNF32_14125;Dbxref=NCBI_GP:MDY4307897.1;Name=MDY4307897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14125;product=hypothetical protein;protein_id=MDY4307897.1;transl_table=11 JAXGFV010000048.1 Genbank gene 17014 17586 . + . ID=gene-SNF32_14130;Name=SNF32_14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14130 JAXGFV010000048.1 GeneMarkS-2+ CDS 17014 17586 . + 0 ID=cds-MDY4307898.1;Parent=gene-SNF32_14130;Dbxref=NCBI_GP:MDY4307898.1;Name=MDY4307898.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14130;product=hypothetical protein;protein_id=MDY4307898.1;transl_table=11 JAXGFV010000048.1 Genbank gene 17720 18103 . + . ID=gene-SNF32_14135;Name=SNF32_14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14135 JAXGFV010000048.1 Protein Homology CDS 17720 18103 . + 0 ID=cds-MDY4307899.1;Parent=gene-SNF32_14135;Dbxref=NCBI_GP:MDY4307899.1;Name=MDY4307899.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024254.3;locus_tag=SNF32_14135;product=DUF87 domain-containing protein;protein_id=MDY4307899.1;transl_table=11 JAXGFV010000048.1 Genbank gene 18216 18758 . + . ID=gene-SNF32_14140;Name=SNF32_14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14140 JAXGFV010000048.1 Protein Homology CDS 18216 18758 . + 0 ID=cds-MDY4307900.1;Parent=gene-SNF32_14140;Dbxref=NCBI_GP:MDY4307900.1;Name=MDY4307900.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040179.2;locus_tag=SNF32_14140;product=hypothetical protein;protein_id=MDY4307900.1;transl_table=11 JAXGFV010000048.1 Genbank gene 19611 20152 . + . ID=gene-SNF32_14145;Name=SNF32_14145;end_range=20152,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14145;partial=true JAXGFV010000048.1 GeneMarkS-2+ CDS 19611 20152 . + 0 ID=cds-MDY4307901.1;Parent=gene-SNF32_14145;Dbxref=NCBI_GP:MDY4307901.1;Name=MDY4307901.1;end_range=20152,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14145;partial=true;product=hypothetical protein;protein_id=MDY4307901.1;transl_table=11 ##sequence-region JAXGFV010000049.1 1 18219 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000049.1 Genbank region 1 18219 . + . ID=JAXGFV010000049.1:1..18219;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000049.1 Genbank gene 552 848 . - . ID=gene-SNF32_14150;Name=SNF32_14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14150 JAXGFV010000049.1 GeneMarkS-2+ CDS 552 848 . - 0 ID=cds-MDY4307902.1;Parent=gene-SNF32_14150;Dbxref=NCBI_GP:MDY4307902.1;Name=MDY4307902.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14150;product=glutaredoxin domain-containing protein;protein_id=MDY4307902.1;transl_table=11 JAXGFV010000049.1 Genbank pseudogene 866 1272 . - . ID=gene-SNF32_14155;Name=spx;gbkey=Gene;gene=spx;gene_biotype=pseudogene;locus_tag=SNF32_14155;pseudo=true JAXGFV010000049.1 Protein Homology CDS 866 1272 . - 0 ID=cds-SNF32_14155;Parent=gene-SNF32_14155;Note=frameshifted;gbkey=CDS;gene=spx;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002325888.1;locus_tag=SNF32_14155;product=transcriptional regulator Spx;pseudo=true;transl_table=11 JAXGFV010000049.1 Genbank pseudogene 1515 3712 . - . ID=gene-SNF32_14160;Name=SNF32_14160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14160;pseudo=true JAXGFV010000049.1 Protein Homology CDS 1515 3712 . - 0 ID=cds-SNF32_14160;Parent=gene-SNF32_14160;Note=frameshifted;Ontology_term=GO:0003677,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010750522.1;locus_tag=SNF32_14160;product=ATP-dependent helicase;pseudo=true;transl_table=11 JAXGFV010000049.1 Genbank pseudogene 4014 4228 . - . ID=gene-SNF32_14165;Name=SNF32_14165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14165;pseudo=true JAXGFV010000049.1 Protein Homology CDS 4014 4228 . - 0 ID=cds-SNF32_14165;Parent=gene-SNF32_14165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736344.1;locus_tag=SNF32_14165;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000049.1 Genbank pseudogene 4804 5409 . + . ID=gene-SNF32_14170;Name=SNF32_14170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14170;pseudo=true JAXGFV010000049.1 Protein Homology CDS 4804 5409 . + 0 ID=cds-SNF32_14170;Parent=gene-SNF32_14170;Note=frameshifted;Ontology_term=GO:0009372,GO:0008233,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptidase activity|0008233||IEA;go_process=quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010750525.1;locus_tag=SNF32_14170;product=accessory gene regulator B family protein;pseudo=true;transl_table=11 JAXGFV010000049.1 Genbank pseudogene 5541 6815 . + . ID=gene-SNF32_14175;Name=SNF32_14175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14175;pseudo=true JAXGFV010000049.1 Protein Homology CDS 5541 6815 . + 0 ID=cds-SNF32_14175;Parent=gene-SNF32_14175;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002316678.1;locus_tag=SNF32_14175;product=GHKL domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000049.1 Genbank pseudogene 6820 7546 . + . ID=gene-SNF32_14180;Name=SNF32_14180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14180;pseudo=true JAXGFV010000049.1 Protein Homology CDS 6820 7546 . + 0 ID=cds-SNF32_14180;Parent=gene-SNF32_14180;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002286278.1;locus_tag=SNF32_14180;product=LytTR family DNA-binding domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000049.1 Genbank pseudogene 7648 9248 . - . ID=gene-SNF32_14185;Name=SNF32_14185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14185;pseudo=true JAXGFV010000049.1 Protein Homology CDS 7648 9248 . - 0 ID=cds-SNF32_14185;Parent=gene-SNF32_14185;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002301679.1;locus_tag=SNF32_14185;product=zinc ABC transporter substrate-binding protein AdcA;pseudo=true;transl_table=11 JAXGFV010000049.1 Genbank pseudogene 9794 10944 . + . ID=gene-SNF32_14190;Name=SNF32_14190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14190;pseudo=true JAXGFV010000049.1 Protein Homology CDS 9794 10944 . + 0 ID=cds-SNF32_14190;Parent=gene-SNF32_14190;Note=frameshifted;Ontology_term=GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002341870.1;locus_tag=SNF32_14190;product=AI-2E family transporter;pseudo=true;transl_table=11 JAXGFV010000049.1 Genbank pseudogene 11104 12733 . - . ID=gene-SNF32_14195;Name=treC;gbkey=Gene;gene=treC;gene_biotype=pseudogene;locus_tag=SNF32_14195;pseudo=true JAXGFV010000049.1 Protein Homology CDS 11104 12733 . - 0 ID=cds-SNF32_14195;Parent=gene-SNF32_14195;Note=frameshifted;Ontology_term=GO:0005991,GO:0008788;gbkey=CDS;gene=treC;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736351.1;locus_tag=SNF32_14195;product=alpha%2Calpha-phosphotrehalase;pseudo=true;transl_table=11 JAXGFV010000049.1 Genbank gene 13087 14181 . + . ID=gene-SNF32_14200;Name=SNF32_14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14200 JAXGFV010000049.1 Protein Homology CDS 13087 14181 . + 0 ID=cds-MDY4307903.1;Parent=gene-SNF32_14200;Dbxref=NCBI_GP:MDY4307903.1;Name=MDY4307903.1;Ontology_term=GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736352.1;locus_tag=SNF32_14200;product=AI-2E family transporter;protein_id=MDY4307903.1;transl_table=11 JAXGFV010000049.1 Genbank pseudogene 14337 14635 . - . ID=gene-SNF32_14205;Name=SNF32_14205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14205;pseudo=true JAXGFV010000049.1 Protein Homology CDS 14337 14635 . - 0 ID=cds-SNF32_14205;Parent=gene-SNF32_14205;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723356.1;locus_tag=SNF32_14205;product=antibiotic biosynthesis monooxygenase;pseudo=true;transl_table=11 JAXGFV010000049.1 Genbank pseudogene 14653 17355 . - . ID=gene-SNF32_14210;Name=SNF32_14210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14210;pseudo=true JAXGFV010000049.1 Protein Homology CDS 14653 17355 . - 0 ID=cds-SNF32_14210;Parent=gene-SNF32_14210;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002333222.1;locus_tag=SNF32_14210;product=FtsX-like permease family protein;pseudo=true;transl_table=11 JAXGFV010000049.1 Genbank pseudogene 17367 18025 . - . ID=gene-SNF32_14215;Name=SNF32_14215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14215;pseudo=true JAXGFV010000049.1 Protein Homology CDS 17367 18025 . - 0 ID=cds-SNF32_14215;Parent=gene-SNF32_14215;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016624560.1;locus_tag=SNF32_14215;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000005.1 1 114927 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000005.1 Genbank region 1 114927 . + . ID=JAXGFV010000005.1:1..114927;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000005.1 Genbank gene 133 603 . - . ID=gene-SNF32_03810;Name=SNF32_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03810 JAXGFV010000005.1 Protein Homology CDS 133 603 . - 0 ID=cds-MDY4306827.1;Parent=gene-SNF32_03810;Dbxref=NCBI_GP:MDY4306827.1;Name=MDY4306827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002344587.1;locus_tag=SNF32_03810;product=glutathione peroxidase;protein_id=MDY4306827.1;transl_table=11 JAXGFV010000005.1 Genbank gene 900 1358 . - . ID=gene-SNF32_03815;Name=SNF32_03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03815 JAXGFV010000005.1 Protein Homology CDS 900 1358 . - 0 ID=cds-MDY4306828.1;Parent=gene-SNF32_03815;Dbxref=NCBI_GP:MDY4306828.1;Name=MDY4306828.1;Ontology_term=GO:0009372,GO:0005506,GO:0043768;gbkey=CDS;go_function=iron ion binding|0005506||IEA,S-ribosylhomocysteine lyase activity|0043768||IEA;go_process=quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736339.1;locus_tag=SNF32_03815;product=S-ribosylhomocysteine lyase;protein_id=MDY4306828.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 1494 2654 . - . ID=gene-SNF32_03820;Name=SNF32_03820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03820;pseudo=true JAXGFV010000005.1 Protein Homology CDS 1494 2654 . - 0 ID=cds-SNF32_03820;Parent=gene-SNF32_03820;Note=frameshifted;Ontology_term=GO:0019346,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010751913.1;locus_tag=SNF32_03820;product=cystathionine gamma-synthase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 2684 3616 . - . ID=gene-SNF32_03825;Name=SNF32_03825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03825;pseudo=true JAXGFV010000005.1 Protein Homology CDS 2684 3616 . - 0 ID=cds-SNF32_03825;Parent=gene-SNF32_03825;Note=frameshifted;Ontology_term=GO:0006535,GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002400452.1;locus_tag=SNF32_03825;product=cysteine synthase family protein;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank gene 3987 4547 . + . ID=gene-SNF32_03830;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=SNF32_03830 JAXGFV010000005.1 Protein Homology CDS 3987 4547 . + 0 ID=cds-MDY4306829.1;Parent=gene-SNF32_03830;Dbxref=NCBI_GP:MDY4306829.1;Name=MDY4306829.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005229668.1;locus_tag=SNF32_03830;product=elongation factor P;protein_id=MDY4306829.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 4608 6062 . - . ID=gene-SNF32_03835;Name=SNF32_03835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03835;pseudo=true JAXGFV010000005.1 Protein Homology CDS 4608 6062 . - 0 ID=cds-SNF32_03835;Parent=gene-SNF32_03835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015510011.1;locus_tag=SNF32_03835;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank gene 6531 6803 . + . ID=gene-SNF32_03840;Name=SNF32_03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03840 JAXGFV010000005.1 GeneMarkS-2+ CDS 6531 6803 . + 0 ID=cds-MDY4306830.1;Parent=gene-SNF32_03840;Dbxref=NCBI_GP:MDY4306830.1;Name=MDY4306830.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03840;product=hypothetical protein;protein_id=MDY4306830.1;transl_table=11 JAXGFV010000005.1 Genbank gene 6800 7381 . + . ID=gene-SNF32_03845;Name=SNF32_03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03845 JAXGFV010000005.1 GeneMarkS-2+ CDS 6800 7381 . + 0 ID=cds-MDY4306831.1;Parent=gene-SNF32_03845;Dbxref=NCBI_GP:MDY4306831.1;Name=MDY4306831.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03845;product=hypothetical protein;protein_id=MDY4306831.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 7587 7652 . + . ID=gene-SNF32_03850;Name=SNF32_03850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03850;pseudo=true JAXGFV010000005.1 Protein Homology CDS 7587 7652 . + 0 ID=cds-SNF32_03850;Parent=gene-SNF32_03850;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024909.3;locus_tag=SNF32_03850;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank gene 7659 8201 . + . ID=gene-SNF32_03855;Name=SNF32_03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03855 JAXGFV010000005.1 GeneMarkS-2+ CDS 7659 8201 . + 0 ID=cds-MDY4306832.1;Parent=gene-SNF32_03855;Dbxref=NCBI_GP:MDY4306832.1;Name=MDY4306832.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03855;product=hypothetical protein;protein_id=MDY4306832.1;transl_table=11 JAXGFV010000005.1 Genbank gene 8356 8484 . - . ID=gene-SNF32_03860;Name=SNF32_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03860 JAXGFV010000005.1 GeneMarkS-2+ CDS 8356 8484 . - 0 ID=cds-MDY4306833.1;Parent=gene-SNF32_03860;Dbxref=NCBI_GP:MDY4306833.1;Name=MDY4306833.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03860;product=hypothetical protein;protein_id=MDY4306833.1;transl_table=11 JAXGFV010000005.1 Genbank gene 8509 9198 . + . ID=gene-SNF32_03865;Name=SNF32_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03865 JAXGFV010000005.1 Protein Homology CDS 8509 9198 . + 0 ID=cds-MDY4306834.1;Parent=gene-SNF32_03865;Dbxref=NCBI_GP:MDY4306834.1;Name=MDY4306834.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037639.3;locus_tag=SNF32_03865;product=SpaA isopeptide-forming pilin-related protein;protein_id=MDY4306834.1;transl_table=11 JAXGFV010000005.1 Genbank gene 9195 9581 . + . ID=gene-SNF32_03870;Name=SNF32_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03870 JAXGFV010000005.1 Protein Homology CDS 9195 9581 . + 0 ID=cds-MDY4306835.1;Parent=gene-SNF32_03870;Dbxref=NCBI_GP:MDY4306835.1;Name=MDY4306835.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037639.3;locus_tag=SNF32_03870;product=SpaA isopeptide-forming pilin-related protein;protein_id=MDY4306835.1;transl_table=11 JAXGFV010000005.1 Genbank gene 9599 9886 . + . ID=gene-SNF32_03875;Name=SNF32_03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03875 JAXGFV010000005.1 Protein Homology CDS 9599 9886 . + 0 ID=cds-MDY4306836.1;Parent=gene-SNF32_03875;Dbxref=NCBI_GP:MDY4306836.1;Name=MDY4306836.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:TIGR01167.1;locus_tag=SNF32_03875;product=LPXTG cell wall anchor domain-containing protein;protein_id=MDY4306836.1;transl_table=11 JAXGFV010000005.1 Genbank gene 9883 10149 . + . ID=gene-SNF32_03880;Name=SNF32_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03880 JAXGFV010000005.1 GeneMarkS-2+ CDS 9883 10149 . + 0 ID=cds-MDY4306837.1;Parent=gene-SNF32_03880;Dbxref=NCBI_GP:MDY4306837.1;Name=MDY4306837.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_03880;product=hypothetical protein;protein_id=MDY4306837.1;transl_table=11 JAXGFV010000005.1 Genbank gene 10149 10403 . + . ID=gene-SNF32_03885;Name=SNF32_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03885 JAXGFV010000005.1 Protein Homology CDS 10149 10403 . + 0 ID=cds-MDY4306838.1;Parent=gene-SNF32_03885;Dbxref=NCBI_GP:MDY4306838.1;Name=MDY4306838.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027869.3;locus_tag=SNF32_03885;product=pilin N-terminal domain-containing protein;protein_id=MDY4306838.1;transl_table=11 JAXGFV010000005.1 Genbank gene 10387 10920 . + . ID=gene-SNF32_03890;Name=SNF32_03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03890 JAXGFV010000005.1 Protein Homology CDS 10387 10920 . + 0 ID=cds-MDY4306839.1;Parent=gene-SNF32_03890;Dbxref=NCBI_GP:MDY4306839.1;Name=MDY4306839.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04226.1;locus_tag=SNF32_03890;product=isopeptide-forming domain-containing fimbrial protein;protein_id=MDY4306839.1;transl_table=11 JAXGFV010000005.1 Genbank gene 10890 11090 . + . ID=gene-SNF32_03895;Name=SNF32_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03895 JAXGFV010000005.1 Protein Homology CDS 10890 11090 . + 0 ID=cds-MDY4306840.1;Parent=gene-SNF32_03895;Dbxref=NCBI_GP:MDY4306840.1;Name=MDY4306840.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037639.3;locus_tag=SNF32_03895;product=prealbumin-like fold domain-containing protein;protein_id=MDY4306840.1;transl_table=11 JAXGFV010000005.1 Genbank gene 11287 11592 . + . ID=gene-SNF32_03900;Name=SNF32_03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03900 JAXGFV010000005.1 Protein Homology CDS 11287 11592 . + 0 ID=cds-MDY4306841.1;Parent=gene-SNF32_03900;Dbxref=NCBI_GP:MDY4306841.1;Name=MDY4306841.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027869.3;locus_tag=SNF32_03900;product=pilin N-terminal domain-containing protein;protein_id=MDY4306841.1;transl_table=11 JAXGFV010000005.1 Genbank gene 11630 12181 . + . ID=gene-SNF32_03905;Name=SNF32_03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03905 JAXGFV010000005.1 Protein Homology CDS 11630 12181 . + 0 ID=cds-MDY4306842.1;Parent=gene-SNF32_03905;Dbxref=NCBI_GP:MDY4306842.1;Name=MDY4306842.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037639.3;locus_tag=SNF32_03905;product=SpaA isopeptide-forming pilin-related protein;protein_id=MDY4306842.1;transl_table=11 JAXGFV010000005.1 Genbank gene 12220 13089 . + . ID=gene-SNF32_03910;Name=SNF32_03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03910 JAXGFV010000005.1 Protein Homology CDS 12220 13089 . + 0 ID=cds-MDY4306843.1;Parent=gene-SNF32_03910;Dbxref=NCBI_GP:MDY4306843.1;Name=MDY4306843.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033902.0;locus_tag=SNF32_03910;product=SpaA isopeptide-forming pilin-related protein;protein_id=MDY4306843.1;transl_table=11 JAXGFV010000005.1 Genbank gene 13439 13990 . + . ID=gene-SNF32_03915;Name=SNF32_03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03915 JAXGFV010000005.1 Protein Homology CDS 13439 13990 . + 0 ID=cds-MDY4306844.1;Parent=gene-SNF32_03915;Dbxref=NCBI_GP:MDY4306844.1;Name=MDY4306844.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033745.1;locus_tag=SNF32_03915;product=class C sortase;protein_id=MDY4306844.1;transl_table=11 JAXGFV010000005.1 Genbank gene 14060 14701 . + . ID=gene-SNF32_03920;Name=SNF32_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03920 JAXGFV010000005.1 Protein Homology CDS 14060 14701 . + 0 ID=cds-MDY4306845.1;Parent=gene-SNF32_03920;Dbxref=NCBI_GP:MDY4306845.1;Name=MDY4306845.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003127504.1;locus_tag=SNF32_03920;product=hemolysin III family protein;protein_id=MDY4306845.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 14971 16225 . + . ID=gene-SNF32_03925;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=pseudogene;locus_tag=SNF32_03925;pseudo=true JAXGFV010000005.1 Protein Homology CDS 14971 16225 . + 0 ID=cds-SNF32_03925;Parent=gene-SNF32_03925;Note=frameshifted;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723557.1;locus_tag=SNF32_03925;product=diaminopimelate decarboxylase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 16212 17017 . + . ID=gene-SNF32_03930;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=pseudogene;locus_tag=SNF32_03930;pseudo=true JAXGFV010000005.1 Protein Homology CDS 16212 17017 . + 0 ID=cds-SNF32_03930;Parent=gene-SNF32_03930;Note=frameshifted;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723556.1;locus_tag=SNF32_03930;product=diaminopimelate epimerase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank gene 17014 17895 . + . ID=gene-SNF32_03935;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=SNF32_03935 JAXGFV010000005.1 Protein Homology CDS 17014 17895 . + 0 ID=cds-MDY4306846.1;Parent=gene-SNF32_03935;Dbxref=NCBI_GP:MDY4306846.1;Name=MDY4306846.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736327.1;locus_tag=SNF32_03935;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=MDY4306846.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 17892 18609 . + . ID=gene-SNF32_03940;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=pseudogene;locus_tag=SNF32_03940;pseudo=true JAXGFV010000005.1 Protein Homology CDS 17892 18609 . + 0 ID=cds-SNF32_03940;Parent=gene-SNF32_03940;Note=frameshifted;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723554.1;locus_tag=SNF32_03940;product=4-hydroxy-tetrahydrodipicolinate reductase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 18611 19304 . + . ID=gene-SNF32_03945;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=pseudogene;locus_tag=SNF32_03945;pseudo=true JAXGFV010000005.1 Protein Homology CDS 18611 19304 . + 0 ID=cds-SNF32_03945;Parent=gene-SNF32_03945;Note=frameshifted;Ontology_term=GO:0009089,GO:0047200;gbkey=CDS;gene=dapD;go_function=tetrahydrodipicolinate N-acetyltransferase activity|0047200||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002338548.1;locus_tag=SNF32_03945;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 19325 20317 . + . ID=gene-SNF32_03950;Name=SNF32_03950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03950;pseudo=true JAXGFV010000005.1 Protein Homology CDS 19325 20317 . + 0 ID=cds-SNF32_03950;Parent=gene-SNF32_03950;Note=internal stop;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: protein motif:HMM:NF014793.3;locus_tag=SNF32_03950;product=aspartate-semialdehyde dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 20314 21662 . + . ID=gene-SNF32_03955;Name=SNF32_03955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03955;pseudo=true JAXGFV010000005.1 Protein Homology CDS 20314 21662 . + 0 ID=cds-SNF32_03955;Parent=gene-SNF32_03955;Note=frameshifted;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736323.1;locus_tag=SNF32_03955;product=aspartate kinase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank gene 21622 22716 . + . ID=gene-SNF32_03960;Name=SNF32_03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03960 JAXGFV010000005.1 Protein Homology CDS 21622 22716 . + 0 ID=cds-MDY4306847.1;Parent=gene-SNF32_03960;Dbxref=NCBI_GP:MDY4306847.1;Name=MDY4306847.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736322.1;locus_tag=SNF32_03960;product=amidohydrolase;protein_id=MDY4306847.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 22751 23908 . + . ID=gene-SNF32_03965;Name=SNF32_03965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03965;pseudo=true JAXGFV010000005.1 Protein Homology CDS 22751 23908 . + 0 ID=cds-SNF32_03965;Parent=gene-SNF32_03965;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005879035.1;locus_tag=SNF32_03965;product=pyridoxal phosphate-dependent aminotransferase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 24003 25415 . + . ID=gene-SNF32_03970;Name=SNF32_03970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03970;pseudo=true JAXGFV010000005.1 Protein Homology CDS 24003 25415 . + 0 ID=cds-SNF32_03970;Parent=gene-SNF32_03970;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014951610.1;locus_tag=SNF32_03970;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank gene 25703 25984 . + . ID=gene-SNF32_03975;Name=SNF32_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03975 JAXGFV010000005.1 Protein Homology CDS 25703 25984 . + 0 ID=cds-MDY4306848.1;Parent=gene-SNF32_03975;Dbxref=NCBI_GP:MDY4306848.1;Name=MDY4306848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723856.1;locus_tag=SNF32_03975;product=hypothetical protein;protein_id=MDY4306848.1;transl_table=11 JAXGFV010000005.1 Genbank gene 26368 26634 . + . ID=gene-SNF32_03980;Name=SNF32_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_03980 JAXGFV010000005.1 Protein Homology CDS 26368 26634 . + 0 ID=cds-MDY4306849.1;Parent=gene-SNF32_03980;Dbxref=NCBI_GP:MDY4306849.1;Name=MDY4306849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736318.1;locus_tag=SNF32_03980;product=hypothetical protein;protein_id=MDY4306849.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 26763 27511 . - . ID=gene-SNF32_03985;Name=SNF32_03985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03985;pseudo=true JAXGFV010000005.1 Protein Homology CDS 26763 27511 . - 0 ID=cds-SNF32_03985;Parent=gene-SNF32_03985;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736317.1;locus_tag=SNF32_03985;product=MurR/RpiR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 27691 28604 . + . ID=gene-SNF32_03990;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=pseudogene;locus_tag=SNF32_03990;pseudo=true JAXGFV010000005.1 Protein Homology CDS 27691 28604 . + 0 ID=cds-SNF32_03990;Parent=gene-SNF32_03990;Note=frameshifted;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003125850.1;locus_tag=SNF32_03990;product=1-phosphofructokinase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 28597 29985 . + . ID=gene-SNF32_03995;Name=SNF32_03995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_03995;pseudo=true JAXGFV010000005.1 Protein Homology CDS 28597 29985 . + 0 ID=cds-SNF32_03995;Parent=gene-SNF32_03995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723853.1;locus_tag=SNF32_03995;product=PTS fructose transporter subunit IIBC;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank gene 30005 30505 . + . ID=gene-SNF32_04000;Name=SNF32_04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04000 JAXGFV010000005.1 Protein Homology CDS 30005 30505 . + 0 ID=cds-MDY4306850.1;Parent=gene-SNF32_04000;Dbxref=NCBI_GP:MDY4306850.1;Name=MDY4306850.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723852.1;locus_tag=SNF32_04000;product=fructose PTS transporter subunit IIA;protein_id=MDY4306850.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 30456 31436 . + . ID=gene-SNF32_04005;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=pseudogene;locus_tag=SNF32_04005;pseudo=true JAXGFV010000005.1 Protein Homology CDS 30456 31436 . + 0 ID=cds-SNF32_04005;Parent=gene-SNF32_04005;Note=frameshifted;Ontology_term=GO:0019512,GO:0009025;gbkey=CDS;gene=lacD;go_function=tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723851.1;locus_tag=SNF32_04005;product=tagatose-bisphosphate aldolase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 31811 32553 . + . ID=gene-SNF32_04010;Name=SNF32_04010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04010;pseudo=true JAXGFV010000005.1 Protein Homology CDS 31811 32553 . + 0 ID=cds-SNF32_04010;Parent=gene-SNF32_04010;Note=frameshifted;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736312.1;locus_tag=SNF32_04010;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 32555 33731 . + . ID=gene-SNF32_04015;Name=SNF32_04015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04015;pseudo=true JAXGFV010000005.1 Protein Homology CDS 32555 33731 . + 0 ID=cds-SNF32_04015;Parent=gene-SNF32_04015;Note=frameshifted;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736311.1;locus_tag=SNF32_04015;product=SIS domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 33743 34802 . + . ID=gene-SNF32_04020;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=pseudogene;locus_tag=SNF32_04020;pseudo=true JAXGFV010000005.1 Protein Homology CDS 33743 34802 . + 0 ID=cds-SNF32_04020;Parent=gene-SNF32_04020;Note=frameshifted;Ontology_term=GO:0019512,GO:0009025;gbkey=CDS;gene=lacD;go_function=tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010766365.1;locus_tag=SNF32_04020;product=tagatose-bisphosphate aldolase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 34784 35262 . + . ID=gene-SNF32_04025;Name=SNF32_04025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04025;pseudo=true JAXGFV010000005.1 Protein Homology CDS 34784 35262 . + 0 ID=cds-SNF32_04025;Parent=gene-SNF32_04025;Note=frameshifted;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016632653.1;locus_tag=SNF32_04025;product=PTS sugar transporter subunit IIB;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 35276 36164 . + . ID=gene-SNF32_04030;Name=SNF32_04030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04030;pseudo=true JAXGFV010000005.1 Protein Homology CDS 35276 36164 . + 0 ID=cds-SNF32_04030;Parent=gene-SNF32_04030;Note=frameshifted;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002311317.1;locus_tag=SNF32_04030;product=PTS sugar transporter subunit IIC;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank gene 36151 36960 . + . ID=gene-SNF32_04035;Name=SNF32_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04035 JAXGFV010000005.1 Protein Homology CDS 36151 36960 . + 0 ID=cds-MDY4306851.1;Parent=gene-SNF32_04035;Dbxref=NCBI_GP:MDY4306851.1;Name=MDY4306851.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002311319.1;locus_tag=SNF32_04035;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=MDY4306851.1;transl_table=11 JAXGFV010000005.1 Genbank gene 36974 37375 . + . ID=gene-SNF32_04040;Name=SNF32_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04040 JAXGFV010000005.1 Protein Homology CDS 36974 37375 . + 0 ID=cds-MDY4306852.1;Parent=gene-SNF32_04040;Dbxref=NCBI_GP:MDY4306852.1;Name=MDY4306852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014387104.1;locus_tag=SNF32_04040;product=PTS fructose transporter subunit IIA;protein_id=MDY4306852.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 37543 38977 . + . ID=gene-SNF32_04045;Name=SNF32_04045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04045;pseudo=true JAXGFV010000005.1 Protein Homology CDS 37543 38977 . + 0 ID=cds-SNF32_04045;Parent=gene-SNF32_04045;Note=frameshifted;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010743408.1;locus_tag=SNF32_04045;product=glycoside hydrolase family 1 protein;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 39573 40539 . + . ID=gene-SNF32_04050;Name=SNF32_04050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04050;pseudo=true JAXGFV010000005.1 Protein Homology CDS 39573 40539 . + 0 ID=cds-SNF32_04050;Parent=gene-SNF32_04050;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736303.1;locus_tag=SNF32_04050;product=arginine deiminase family protein;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank gene 40585 40929 . + . ID=gene-SNF32_04055;Name=SNF32_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04055 JAXGFV010000005.1 Protein Homology CDS 40585 40929 . + 0 ID=cds-MDY4306853.1;Parent=gene-SNF32_04055;Dbxref=NCBI_GP:MDY4306853.1;Name=MDY4306853.1;Ontology_term=GO:0004721;gbkey=CDS;go_function=phosphoprotein phosphatase activity|0004721||IEA;inference=COORDINATES: protein motif:HMM:NF024744.3;locus_tag=SNF32_04055;product=tyrosine-protein phosphatase;protein_id=MDY4306853.1;transl_table=11 JAXGFV010000005.1 Genbank gene 40926 41138 . + . ID=gene-SNF32_04060;Name=SNF32_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04060 JAXGFV010000005.1 Protein Homology CDS 40926 41138 . + 0 ID=cds-MDY4306854.1;Parent=gene-SNF32_04060;Dbxref=NCBI_GP:MDY4306854.1;Name=MDY4306854.1;Ontology_term=GO:0004721;gbkey=CDS;go_function=phosphoprotein phosphatase activity|0004721||IEA;inference=COORDINATES: protein motif:HMM:NF024744.3;locus_tag=SNF32_04060;product=tyrosine-protein phosphatase;protein_id=MDY4306854.1;transl_table=11 JAXGFV010000005.1 Genbank gene 41110 41343 . + . ID=gene-SNF32_04065;Name=SNF32_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04065 JAXGFV010000005.1 Protein Homology CDS 41110 41343 . + 0 ID=cds-MDY4306855.1;Parent=gene-SNF32_04065;Dbxref=NCBI_GP:MDY4306855.1;Name=MDY4306855.1;Ontology_term=GO:0004721;gbkey=CDS;go_function=phosphoprotein phosphatase activity|0004721||IEA;inference=COORDINATES: protein motif:HMM:NF024744.3;locus_tag=SNF32_04065;product=tyrosine-protein phosphatase;protein_id=MDY4306855.1;transl_table=11 JAXGFV010000005.1 Genbank gene 41924 42565 . + . ID=gene-SNF32_04070;Name=SNF32_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04070 JAXGFV010000005.1 GeneMarkS-2+ CDS 41924 42565 . + 0 ID=cds-MDY4306856.1;Parent=gene-SNF32_04070;Dbxref=NCBI_GP:MDY4306856.1;Name=MDY4306856.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04070;product=hypothetical protein;protein_id=MDY4306856.1;transl_table=11 JAXGFV010000005.1 Genbank gene 42570 42746 . + . ID=gene-SNF32_04075;Name=SNF32_04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04075 JAXGFV010000005.1 Protein Homology CDS 42570 42746 . + 0 ID=cds-MDY4306857.1;Parent=gene-SNF32_04075;Dbxref=NCBI_GP:MDY4306857.1;Name=MDY4306857.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015347.3;locus_tag=SNF32_04075;product=BspA family leucine-rich repeat surface protein;protein_id=MDY4306857.1;transl_table=11 JAXGFV010000005.1 Genbank gene 42890 44092 . - . ID=gene-SNF32_04080;Name=SNF32_04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04080 JAXGFV010000005.1 Protein Homology CDS 42890 44092 . - 0 ID=cds-MDY4306858.1;Parent=gene-SNF32_04080;Dbxref=NCBI_GP:MDY4306858.1;Name=MDY4306858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736300.1;locus_tag=SNF32_04080;product=NADH:flavin oxidoreductase/NADH oxidase family protein;protein_id=MDY4306858.1;transl_table=11 JAXGFV010000005.1 Genbank gene 44110 44346 . - . ID=gene-SNF32_04085;Name=SNF32_04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04085 JAXGFV010000005.1 Protein Homology CDS 44110 44346 . - 0 ID=cds-MDY4306859.1;Parent=gene-SNF32_04085;Dbxref=NCBI_GP:MDY4306859.1;Name=MDY4306859.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012398.3;locus_tag=SNF32_04085;product=aldehyde dehydrogenase family protein;protein_id=MDY4306859.1;transl_table=11 JAXGFV010000005.1 Genbank gene 44390 45202 . - . ID=gene-SNF32_04090;Name=SNF32_04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04090 JAXGFV010000005.1 Protein Homology CDS 44390 45202 . - 0 ID=cds-MDY4306860.1;Parent=gene-SNF32_04090;Dbxref=NCBI_GP:MDY4306860.1;Name=MDY4306860.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012398.3;locus_tag=SNF32_04090;product=aldehyde dehydrogenase family protein;protein_id=MDY4306860.1;transl_table=11 JAXGFV010000005.1 Genbank gene 45243 45368 . - . ID=gene-SNF32_04095;Name=SNF32_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04095 JAXGFV010000005.1 GeneMarkS-2+ CDS 45243 45368 . - 0 ID=cds-MDY4306861.1;Parent=gene-SNF32_04095;Dbxref=NCBI_GP:MDY4306861.1;Name=MDY4306861.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04095;product=hypothetical protein;protein_id=MDY4306861.1;transl_table=11 JAXGFV010000005.1 Genbank gene 45518 45841 . - . ID=gene-SNF32_04100;Name=SNF32_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04100 JAXGFV010000005.1 Protein Homology CDS 45518 45841 . - 0 ID=cds-MDY4306862.1;Parent=gene-SNF32_04100;Dbxref=NCBI_GP:MDY4306862.1;Name=MDY4306862.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736298.1;locus_tag=SNF32_04100;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=MDY4306862.1;transl_table=11 JAXGFV010000005.1 Genbank gene 46041 46256 . + . ID=gene-SNF32_04105;Name=SNF32_04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04105 JAXGFV010000005.1 Protein Homology CDS 46041 46256 . + 0 ID=cds-MDY4306863.1;Parent=gene-SNF32_04105;Dbxref=NCBI_GP:MDY4306863.1;Name=MDY4306863.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019826.3;locus_tag=SNF32_04105;product=HTH domain-containing protein;protein_id=MDY4306863.1;transl_table=11 JAXGFV010000005.1 Genbank gene 46400 46525 . + . ID=gene-SNF32_04110;Name=SNF32_04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04110 JAXGFV010000005.1 Protein Homology CDS 46400 46525 . + 0 ID=cds-MDY4306864.1;Parent=gene-SNF32_04110;Dbxref=NCBI_GP:MDY4306864.1;Name=MDY4306864.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016901.3;locus_tag=SNF32_04110;product=helix-turn-helix domain-containing protein;protein_id=MDY4306864.1;transl_table=11 JAXGFV010000005.1 Genbank gene 46580 46753 . + . ID=gene-SNF32_04115;Name=SNF32_04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04115 JAXGFV010000005.1 GeneMarkS-2+ CDS 46580 46753 . + 0 ID=cds-MDY4306865.1;Parent=gene-SNF32_04115;Dbxref=NCBI_GP:MDY4306865.1;Name=MDY4306865.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04115;product=hypothetical protein;protein_id=MDY4306865.1;transl_table=11 JAXGFV010000005.1 Genbank gene 46818 47036 . + . ID=gene-SNF32_04120;Name=SNF32_04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04120 JAXGFV010000005.1 GeneMarkS-2+ CDS 46818 47036 . + 0 ID=cds-MDY4306866.1;Parent=gene-SNF32_04120;Dbxref=NCBI_GP:MDY4306866.1;Name=MDY4306866.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04120;product=hypothetical protein;protein_id=MDY4306866.1;transl_table=11 JAXGFV010000005.1 Genbank gene 47179 47508 . + . ID=gene-SNF32_04125;Name=SNF32_04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04125 JAXGFV010000005.1 GeneMarkS-2+ CDS 47179 47508 . + 0 ID=cds-MDY4306867.1;Parent=gene-SNF32_04125;Dbxref=NCBI_GP:MDY4306867.1;Name=MDY4306867.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04125;product=hypothetical protein;protein_id=MDY4306867.1;transl_table=11 JAXGFV010000005.1 Genbank gene 47818 48108 . + . ID=gene-SNF32_04130;Name=SNF32_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04130 JAXGFV010000005.1 Protein Homology CDS 47818 48108 . + 0 ID=cds-MDY4306868.1;Parent=gene-SNF32_04130;Dbxref=NCBI_GP:MDY4306868.1;Name=MDY4306868.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736442.1;locus_tag=SNF32_04130;product=LPXTG cell wall anchor domain-containing protein;protein_id=MDY4306868.1;transl_table=11 JAXGFV010000005.1 Genbank gene 48127 48939 . + . ID=gene-SNF32_04135;Name=SNF32_04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04135 JAXGFV010000005.1 Protein Homology CDS 48127 48939 . + 0 ID=cds-MDY4306869.1;Parent=gene-SNF32_04135;Dbxref=NCBI_GP:MDY4306869.1;Name=MDY4306869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723495.1;locus_tag=SNF32_04135;product=WxL domain-containing protein;protein_id=MDY4306869.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 49153 49484 . + . ID=gene-SNF32_04140;Name=SNF32_04140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04140;pseudo=true JAXGFV010000005.1 Protein Homology CDS 49153 49484 . + 0 ID=cds-SNF32_04140;Parent=gene-SNF32_04140;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017810.3;locus_tag=SNF32_04140;product=DUF916 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank gene 49491 50882 . + . ID=gene-SNF32_04145;Name=SNF32_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04145 JAXGFV010000005.1 Protein Homology CDS 49491 50882 . + 0 ID=cds-MDY4306870.1;Parent=gene-SNF32_04145;Dbxref=NCBI_GP:MDY4306870.1;Name=MDY4306870.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023225.3;locus_tag=SNF32_04145;product=DUF3324 domain-containing protein;protein_id=MDY4306870.1;transl_table=11 JAXGFV010000005.1 Genbank gene 51267 52055 . + . ID=gene-SNF32_04150;Name=SNF32_04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04150 JAXGFV010000005.1 GeneMarkS-2+ CDS 51267 52055 . + 0 ID=cds-MDY4306871.1;Parent=gene-SNF32_04150;Dbxref=NCBI_GP:MDY4306871.1;Name=MDY4306871.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04150;product=hypothetical protein;protein_id=MDY4306871.1;transl_table=11 JAXGFV010000005.1 Genbank gene 52220 53557 . + . ID=gene-SNF32_04155;Name=SNF32_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04155 JAXGFV010000005.1 GeneMarkS-2+ CDS 52220 53557 . + 0 ID=cds-MDY4306872.1;Parent=gene-SNF32_04155;Dbxref=NCBI_GP:MDY4306872.1;Name=MDY4306872.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04155;product=WxL domain-containing protein;protein_id=MDY4306872.1;transl_table=11 JAXGFV010000005.1 Genbank gene 54013 54984 . + . ID=gene-SNF32_04160;Name=SNF32_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04160 JAXGFV010000005.1 Protein Homology CDS 54013 54984 . + 0 ID=cds-MDY4306873.1;Parent=gene-SNF32_04160;Dbxref=NCBI_GP:MDY4306873.1;Name=MDY4306873.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024491.3;locus_tag=SNF32_04160;product=phospholipase D-like domain-containing protein;protein_id=MDY4306873.1;transl_table=11 JAXGFV010000005.1 Genbank gene 54981 55463 . + . ID=gene-SNF32_04165;Name=SNF32_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04165 JAXGFV010000005.1 Protein Homology CDS 54981 55463 . + 0 ID=cds-MDY4306874.1;Parent=gene-SNF32_04165;Dbxref=NCBI_GP:MDY4306874.1;Name=MDY4306874.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024491.3;locus_tag=SNF32_04165;product=phospholipase D-like domain-containing protein;protein_id=MDY4306874.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 55722 57214 . + . ID=gene-SNF32_04170;Name=crtI;gbkey=Gene;gene=crtI;gene_biotype=pseudogene;locus_tag=SNF32_04170;pseudo=true JAXGFV010000005.1 Protein Homology CDS 55722 57214 . + 0 ID=cds-SNF32_04170;Parent=gene-SNF32_04170;Note=frameshifted;Ontology_term=GO:0016117,GO:0016166;gbkey=CDS;gene=crtI;go_function=phytoene dehydrogenase activity|0016166||IEA;go_process=carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736290.1;locus_tag=SNF32_04170;product=phytoene desaturase family protein;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank gene 57230 57742 . + . ID=gene-SNF32_04175;Name=SNF32_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04175 JAXGFV010000005.1 Protein Homology CDS 57230 57742 . + 0 ID=cds-MDY4306875.1;Parent=gene-SNF32_04175;Dbxref=NCBI_GP:MDY4306875.1;Name=MDY4306875.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012745.3;locus_tag=SNF32_04175;product=glycosyltransferase family 2 protein;protein_id=MDY4306875.1;transl_table=11 JAXGFV010000005.1 Genbank gene 57748 58251 . + . ID=gene-SNF32_04180;Name=SNF32_04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04180 JAXGFV010000005.1 GeneMarkS-2+ CDS 57748 58251 . + 0 ID=cds-MDY4306876.1;Parent=gene-SNF32_04180;Dbxref=NCBI_GP:MDY4306876.1;Name=MDY4306876.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04180;product=hypothetical protein;protein_id=MDY4306876.1;transl_table=11 JAXGFV010000005.1 Genbank gene 58484 58744 . + . ID=gene-SNF32_04185;Name=SNF32_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04185 JAXGFV010000005.1 GeneMarkS-2+ CDS 58484 58744 . + 0 ID=cds-MDY4306877.1;Parent=gene-SNF32_04185;Dbxref=NCBI_GP:MDY4306877.1;Name=MDY4306877.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04185;product=hypothetical protein;protein_id=MDY4306877.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 59095 59338 . + . ID=gene-SNF32_04190;Name=SNF32_04190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04190;pseudo=true JAXGFV010000005.1 Protein Homology CDS 59095 59338 . + 0 ID=cds-SNF32_04190;Parent=gene-SNF32_04190;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000285204.1;locus_tag=SNF32_04190;product=type II toxin-antitoxin system YafQ family toxin;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 60286 60713 . + . ID=gene-SNF32_04195;Name=SNF32_04195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04195;pseudo=true JAXGFV010000005.1 Protein Homology CDS 60286 60713 . + 0 ID=cds-SNF32_04195;Parent=gene-SNF32_04195;Note=frameshifted;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736278.1;locus_tag=SNF32_04195;product=sigma-70 family RNA polymerase sigma factor;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank gene 60844 61212 . + . ID=gene-SNF32_04200;Name=SNF32_04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04200 JAXGFV010000005.1 GeneMarkS-2+ CDS 60844 61212 . + 0 ID=cds-MDY4306878.1;Parent=gene-SNF32_04200;Dbxref=NCBI_GP:MDY4306878.1;Name=MDY4306878.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04200;product=hypothetical protein;protein_id=MDY4306878.1;transl_table=11 JAXGFV010000005.1 Genbank gene 61212 61415 . + . ID=gene-SNF32_04205;Name=SNF32_04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04205 JAXGFV010000005.1 GeneMarkS-2+ CDS 61212 61415 . + 0 ID=cds-MDY4306879.1;Parent=gene-SNF32_04205;Dbxref=NCBI_GP:MDY4306879.1;Name=MDY4306879.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04205;product=hypothetical protein;protein_id=MDY4306879.1;transl_table=11 JAXGFV010000005.1 Genbank gene 61742 61864 . - . ID=gene-SNF32_04210;Name=SNF32_04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04210 JAXGFV010000005.1 GeneMarkS-2+ CDS 61742 61864 . - 0 ID=cds-MDY4306880.1;Parent=gene-SNF32_04210;Dbxref=NCBI_GP:MDY4306880.1;Name=MDY4306880.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04210;product=hypothetical protein;protein_id=MDY4306880.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 62513 63857 . - . ID=gene-SNF32_04215;Name=SNF32_04215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04215;pseudo=true JAXGFV010000005.1 Protein Homology CDS 62513 63857 . - 0 ID=cds-SNF32_04215;Parent=gene-SNF32_04215;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002286860.1;locus_tag=SNF32_04215;product=Y-family DNA polymerase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 64402 65420 . + . ID=gene-SNF32_04220;Name=aroF;gbkey=Gene;gene=aroF;gene_biotype=pseudogene;locus_tag=SNF32_04220;pseudo=true JAXGFV010000005.1 Protein Homology CDS 64402 65420 . + 0 ID=cds-SNF32_04220;Parent=gene-SNF32_04220;Note=frameshifted;Ontology_term=GO:0009423,GO:0003849;gbkey=CDS;gene=aroF;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177879.1;locus_tag=SNF32_04220;product=3-deoxy-7-phosphoheptulonate synthase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 65661 66091 . + . ID=gene-SNF32_04225;Name=SNF32_04225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04225;pseudo=true JAXGFV010000005.1 Protein Homology CDS 65661 66091 . + 0 ID=cds-SNF32_04225;Parent=gene-SNF32_04225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013887.3;locus_tag=SNF32_04225;product=iron-containing alcohol dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank gene 66088 66492 . + . ID=gene-SNF32_04230;Name=SNF32_04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04230 JAXGFV010000005.1 Protein Homology CDS 66088 66492 . + 0 ID=cds-MDY4306881.1;Parent=gene-SNF32_04230;Dbxref=NCBI_GP:MDY4306881.1;Name=MDY4306881.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013887.3;locus_tag=SNF32_04230;product=hypothetical protein;protein_id=MDY4306881.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 66493 67655 . + . ID=gene-SNF32_04235;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=pseudogene;locus_tag=SNF32_04235;pseudo=true JAXGFV010000005.1 Protein Homology CDS 66493 67655 . + 0 ID=cds-SNF32_04235;Parent=gene-SNF32_04235;Note=frameshifted;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014383.1;locus_tag=SNF32_04235;product=chorismate synthase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 67669 68747 . + . ID=gene-SNF32_04240;Name=SNF32_04240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04240;pseudo=true JAXGFV010000005.1 Protein Homology CDS 67669 68747 . + 0 ID=cds-SNF32_04240;Parent=gene-SNF32_04240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010739165.1;locus_tag=SNF32_04240;product=prephenate dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank gene 68752 70035 . + . ID=gene-SNF32_04245;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=SNF32_04245 JAXGFV010000005.1 Protein Homology CDS 68752 70035 . + 0 ID=cds-MDY4306882.1;Parent=gene-SNF32_04245;Dbxref=NCBI_GP:MDY4306882.1;Name=MDY4306882.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736268.1;locus_tag=SNF32_04245;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=MDY4306882.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 70035 70539 . + . ID=gene-SNF32_04250;Name=SNF32_04250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04250;pseudo=true JAXGFV010000005.1 Protein Homology CDS 70035 70539 . + 0 ID=cds-SNF32_04250;Parent=gene-SNF32_04250;Note=frameshifted;Ontology_term=GO:0008652,GO:0009073,GO:0000287,GO:0004765,GO:0005524;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,shikimate kinase activity|0004765||IEA,ATP binding|0005524||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736267.1;locus_tag=SNF32_04250;product=shikimate kinase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 70536 71400 . + . ID=gene-SNF32_04255;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=pseudogene;locus_tag=SNF32_04255;pseudo=true JAXGFV010000005.1 Protein Homology CDS 70536 71400 . + 0 ID=cds-SNF32_04255;Parent=gene-SNF32_04255;Note=frameshifted;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736266.1;locus_tag=SNF32_04255;product=prephenate dehydratase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank gene 71563 71724 . + . ID=gene-SNF32_04260;Name=SNF32_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04260 JAXGFV010000005.1 Protein Homology CDS 71563 71724 . + 0 ID=cds-MDY4306883.1;Parent=gene-SNF32_04260;Dbxref=NCBI_GP:MDY4306883.1;Name=MDY4306883.1;Ontology_term=GO:0003729;gbkey=CDS;go_function=mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002350171.1;locus_tag=SNF32_04260;product=type II toxin-antitoxin system HicA family toxin;protein_id=MDY4306883.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 71759 72212 . + . ID=gene-SNF32_04265;Name=SNF32_04265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04265;pseudo=true JAXGFV010000005.1 Protein Homology CDS 71759 72212 . + 0 ID=cds-SNF32_04265;Parent=gene-SNF32_04265;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000961815.1;locus_tag=SNF32_04265;product=type II toxin-antitoxin system HicB family antitoxin;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank gene 72348 72845 . + . ID=gene-SNF32_04270;Name=SNF32_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04270 JAXGFV010000005.1 Protein Homology CDS 72348 72845 . + 0 ID=cds-MDY4306884.1;Parent=gene-SNF32_04270;Dbxref=NCBI_GP:MDY4306884.1;Name=MDY4306884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736264.1;locus_tag=SNF32_04270;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=MDY4306884.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 73117 74282 . - . ID=gene-SNF32_04275;Name=SNF32_04275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04275;pseudo=true JAXGFV010000005.1 Protein Homology CDS 73117 74282 . - 0 ID=cds-SNF32_04275;Parent=gene-SNF32_04275;Note=frameshifted;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736263.1;locus_tag=SNF32_04275;product=galactokinase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 74279 75279 . - . ID=gene-SNF32_04280;Name=SNF32_04280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04280;pseudo=true JAXGFV010000005.1 Protein Homology CDS 74279 75279 . - 0 ID=cds-SNF32_04280;Parent=gene-SNF32_04280;Note=frameshifted;Ontology_term=GO:0005975,GO:0016857,GO:0030246;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002346498.1;locus_tag=SNF32_04280;product=aldose epimerase family protein;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 75583 76444 . + . ID=gene-SNF32_04285;Name=SNF32_04285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04285;pseudo=true JAXGFV010000005.1 Protein Homology CDS 75583 76444 . + 0 ID=cds-SNF32_04285;Parent=gene-SNF32_04285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010757339.1;locus_tag=SNF32_04285;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank gene 76513 77190 . + . ID=gene-SNF32_04290;Name=SNF32_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04290 JAXGFV010000005.1 Protein Homology CDS 76513 77190 . + 0 ID=cds-MDY4306885.1;Parent=gene-SNF32_04290;Dbxref=NCBI_GP:MDY4306885.1;Name=MDY4306885.1;Ontology_term=GO:0008753,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002314509.1;locus_tag=SNF32_04290;product=NAD(P)H-dependent oxidoreductase;protein_id=MDY4306885.1;transl_table=11 JAXGFV010000005.1 Genbank gene 77187 77378 . + . ID=gene-SNF32_04295;Name=SNF32_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04295 JAXGFV010000005.1 Protein Homology CDS 77187 77378 . + 0 ID=cds-MDY4306886.1;Parent=gene-SNF32_04295;Dbxref=NCBI_GP:MDY4306886.1;Name=MDY4306886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002291423.1;locus_tag=SNF32_04295;product=hypothetical protein;protein_id=MDY4306886.1;transl_table=11 JAXGFV010000005.1 Genbank gene 77474 78382 . + . ID=gene-SNF32_04300;Name=SNF32_04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04300 JAXGFV010000005.1 Protein Homology CDS 77474 78382 . + 0 ID=cds-MDY4306887.1;Parent=gene-SNF32_04300;Dbxref=NCBI_GP:MDY4306887.1;Name=MDY4306887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002314511.1;locus_tag=SNF32_04300;product=LysM peptidoglycan-binding domain-containing protein;protein_id=MDY4306887.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 78543 79275 . + . ID=gene-SNF32_04305;Name=SNF32_04305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04305;pseudo=true JAXGFV010000005.1 Protein Homology CDS 78543 79275 . + 0 ID=cds-SNF32_04305;Parent=gene-SNF32_04305;Note=frameshifted;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010749904.1;locus_tag=SNF32_04305;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank gene 79933 80163 . + . ID=gene-SNF32_04310;Name=SNF32_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04310 JAXGFV010000005.1 Protein Homology CDS 79933 80163 . + 0 ID=cds-MDY4306888.1;Parent=gene-SNF32_04310;Dbxref=NCBI_GP:MDY4306888.1;Name=MDY4306888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722381.1;locus_tag=SNF32_04310;product=hypothetical protein;protein_id=MDY4306888.1;transl_table=11 JAXGFV010000005.1 Genbank gene 80361 80492 . + . ID=gene-SNF32_04315;Name=SNF32_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04315 JAXGFV010000005.1 GeneMarkS-2+ CDS 80361 80492 . + 0 ID=cds-MDY4306889.1;Parent=gene-SNF32_04315;Dbxref=NCBI_GP:MDY4306889.1;Name=MDY4306889.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04315;product=hypothetical protein;protein_id=MDY4306889.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 80618 81816 . - . ID=gene-SNF32_04320;Name=SNF32_04320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04320;pseudo=true JAXGFV010000005.1 Protein Homology CDS 80618 81816 . - 0 ID=cds-SNF32_04320;Parent=gene-SNF32_04320;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015510252.1;locus_tag=SNF32_04320;product=enolase C-terminal domain-like protein;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 82089 83916 . + . ID=gene-SNF32_04325;Name=SNF32_04325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04325;pseudo=true JAXGFV010000005.1 Protein Homology CDS 82089 83916 . + 0 ID=cds-SNF32_04325;Parent=gene-SNF32_04325;Note=frameshifted;Ontology_term=GO:0009401;gbkey=CDS;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010779907.1;locus_tag=SNF32_04325;product=glucose PTS transporter subunit IIA;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank gene 84326 84625 . + . ID=gene-SNF32_04330;Name=SNF32_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04330 JAXGFV010000005.1 Protein Homology CDS 84326 84625 . + 0 ID=cds-MDY4306890.1;Parent=gene-SNF32_04330;Dbxref=NCBI_GP:MDY4306890.1;Name=MDY4306890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722378.1;locus_tag=SNF32_04330;product=hypothetical protein;protein_id=MDY4306890.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 84757 85111 . - . ID=gene-SNF32_04335;Name=SNF32_04335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04335;pseudo=true JAXGFV010000005.1 Protein Homology CDS 84757 85111 . - 0 ID=cds-SNF32_04335;Parent=gene-SNF32_04335;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722377.1;locus_tag=SNF32_04335;product=winged helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 85316 86453 . + . ID=gene-SNF32_04340;Name=SNF32_04340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04340;pseudo=true JAXGFV010000005.1 Protein Homology CDS 85316 86453 . + 0 ID=cds-SNF32_04340;Parent=gene-SNF32_04340;Note=frameshifted;Ontology_term=GO:0006113,GO:0009404,GO:0004024,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase activity%2C zinc-dependent|0004024||IEA,S-(hydroxymethyl)glutathione dehydrogenase activity|0051903||IEA;go_process=fermentation|0006113||IEA,toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722376.1;locus_tag=SNF32_04340;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 86434 87274 . + . ID=gene-SNF32_04345;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=pseudogene;locus_tag=SNF32_04345;pseudo=true JAXGFV010000005.1 Protein Homology CDS 86434 87274 . + 0 ID=cds-SNF32_04345;Parent=gene-SNF32_04345;Note=frameshifted;Ontology_term=GO:0046292,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013709848.1;locus_tag=SNF32_04345;product=S-formylglutathione hydrolase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank gene 88278 88535 . - . ID=gene-SNF32_04350;Name=SNF32_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04350 JAXGFV010000005.1 Protein Homology CDS 88278 88535 . - 0 ID=cds-MDY4306891.1;Parent=gene-SNF32_04350;Dbxref=NCBI_GP:MDY4306891.1;Name=MDY4306891.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024093.3;locus_tag=SNF32_04350;product=hypothetical protein;protein_id=MDY4306891.1;transl_table=11 JAXGFV010000005.1 Genbank gene 88978 89325 . - . ID=gene-SNF32_04355;Name=SNF32_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04355 JAXGFV010000005.1 GeneMarkS-2+ CDS 88978 89325 . - 0 ID=cds-MDY4306892.1;Parent=gene-SNF32_04355;Dbxref=NCBI_GP:MDY4306892.1;Name=MDY4306892.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04355;product=hypothetical protein;protein_id=MDY4306892.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 90404 91868 . + . ID=gene-SNF32_04360;Name=SNF32_04360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04360;pseudo=true JAXGFV010000005.1 Protein Homology CDS 90404 91868 . + 0 ID=cds-SNF32_04360;Parent=gene-SNF32_04360;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722373.1;locus_tag=SNF32_04360;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank gene 92131 92322 . + . ID=gene-SNF32_04365;Name=SNF32_04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04365 JAXGFV010000005.1 GeneMarkS-2+ CDS 92131 92322 . + 0 ID=cds-MDY4306893.1;Parent=gene-SNF32_04365;Dbxref=NCBI_GP:MDY4306893.1;Name=MDY4306893.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04365;product=hypothetical protein;protein_id=MDY4306893.1;transl_table=11 JAXGFV010000005.1 Genbank gene 92445 93539 . + . ID=gene-SNF32_04370;Name=SNF32_04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04370 JAXGFV010000005.1 Protein Homology CDS 92445 93539 . + 0 ID=cds-MDY4306894.1;Parent=gene-SNF32_04370;Dbxref=NCBI_GP:MDY4306894.1;Name=MDY4306894.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015347.3;locus_tag=SNF32_04370;product=BspA family leucine-rich repeat surface protein;protein_id=MDY4306894.1;transl_table=11 JAXGFV010000005.1 Genbank gene 93587 94663 . + . ID=gene-SNF32_04375;Name=SNF32_04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04375 JAXGFV010000005.1 GeneMarkS-2+ CDS 93587 94663 . + 0 ID=cds-MDY4306895.1;Parent=gene-SNF32_04375;Dbxref=NCBI_GP:MDY4306895.1;Name=MDY4306895.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04375;product=hypothetical protein;protein_id=MDY4306895.1;transl_table=11 JAXGFV010000005.1 Genbank gene 94632 94814 . + . ID=gene-SNF32_04380;Name=SNF32_04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04380 JAXGFV010000005.1 GeneMarkS-2+ CDS 94632 94814 . + 0 ID=cds-MDY4306896.1;Parent=gene-SNF32_04380;Dbxref=NCBI_GP:MDY4306896.1;Name=MDY4306896.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04380;product=hypothetical protein;protein_id=MDY4306896.1;transl_table=11 JAXGFV010000005.1 Genbank gene 94846 95364 . + . ID=gene-SNF32_04385;Name=SNF32_04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04385 JAXGFV010000005.1 Protein Homology CDS 94846 95364 . + 0 ID=cds-MDY4306897.1;Parent=gene-SNF32_04385;Dbxref=NCBI_GP:MDY4306897.1;Name=MDY4306897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722371.1;locus_tag=SNF32_04385;product=hypothetical protein;protein_id=MDY4306897.1;transl_table=11 JAXGFV010000005.1 Genbank gene 95439 95945 . + . ID=gene-SNF32_04390;Name=SNF32_04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04390 JAXGFV010000005.1 Protein Homology CDS 95439 95945 . + 0 ID=cds-MDY4306898.1;Parent=gene-SNF32_04390;Dbxref=NCBI_GP:MDY4306898.1;Name=MDY4306898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722370.1;locus_tag=SNF32_04390;product=hypothetical protein;protein_id=MDY4306898.1;transl_table=11 JAXGFV010000005.1 Genbank gene 95986 96351 . + . ID=gene-SNF32_04395;Name=SNF32_04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04395 JAXGFV010000005.1 Protein Homology CDS 95986 96351 . + 0 ID=cds-MDY4306899.1;Parent=gene-SNF32_04395;Dbxref=NCBI_GP:MDY4306899.1;Name=MDY4306899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722369.1;locus_tag=SNF32_04395;product=hypothetical protein;protein_id=MDY4306899.1;transl_table=11 JAXGFV010000005.1 Genbank gene 96650 97633 . + . ID=gene-SNF32_04400;Name=SNF32_04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04400 JAXGFV010000005.1 Protein Homology CDS 96650 97633 . + 0 ID=cds-MDY4306900.1;Parent=gene-SNF32_04400;Dbxref=NCBI_GP:MDY4306900.1;Name=MDY4306900.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042900.1;locus_tag=SNF32_04400;product=pectate lyase-like adhesive domain-containing protein;protein_id=MDY4306900.1;transl_table=11 JAXGFV010000005.1 Genbank gene 97849 98064 . + . ID=gene-SNF32_04405;Name=SNF32_04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04405 JAXGFV010000005.1 GeneMarkS-2+ CDS 97849 98064 . + 0 ID=cds-MDY4306901.1;Parent=gene-SNF32_04405;Dbxref=NCBI_GP:MDY4306901.1;Name=MDY4306901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04405;product=hypothetical protein;protein_id=MDY4306901.1;transl_table=11 JAXGFV010000005.1 Genbank gene 98069 98239 . - . ID=gene-SNF32_04410;Name=SNF32_04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04410 JAXGFV010000005.1 GeneMarkS-2+ CDS 98069 98239 . - 0 ID=cds-MDY4306902.1;Parent=gene-SNF32_04410;Dbxref=NCBI_GP:MDY4306902.1;Name=MDY4306902.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04410;product=hypothetical protein;protein_id=MDY4306902.1;transl_table=11 JAXGFV010000005.1 Genbank gene 98241 99011 . + . ID=gene-SNF32_04415;Name=SNF32_04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04415 JAXGFV010000005.1 GeneMarkS-2+ CDS 98241 99011 . + 0 ID=cds-MDY4306903.1;Parent=gene-SNF32_04415;Dbxref=NCBI_GP:MDY4306903.1;Name=MDY4306903.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04415;product=hypothetical protein;protein_id=MDY4306903.1;transl_table=11 JAXGFV010000005.1 Genbank gene 99264 99404 . - . ID=gene-SNF32_04420;Name=SNF32_04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04420 JAXGFV010000005.1 GeneMarkS-2+ CDS 99264 99404 . - 0 ID=cds-MDY4306904.1;Parent=gene-SNF32_04420;Dbxref=NCBI_GP:MDY4306904.1;Name=MDY4306904.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04420;product=hypothetical protein;protein_id=MDY4306904.1;transl_table=11 JAXGFV010000005.1 Genbank gene 100440 100730 . - . ID=gene-SNF32_04425;Name=SNF32_04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04425 JAXGFV010000005.1 GeneMarkS-2+ CDS 100440 100730 . - 0 ID=cds-MDY4306905.1;Parent=gene-SNF32_04425;Dbxref=NCBI_GP:MDY4306905.1;Name=MDY4306905.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04425;product=hypothetical protein;protein_id=MDY4306905.1;transl_table=11 JAXGFV010000005.1 Genbank gene 101015 101386 . + . ID=gene-SNF32_04430;Name=SNF32_04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04430 JAXGFV010000005.1 Protein Homology CDS 101015 101386 . + 0 ID=cds-MDY4306906.1;Parent=gene-SNF32_04430;Dbxref=NCBI_GP:MDY4306906.1;Name=MDY4306906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736240.1;locus_tag=SNF32_04430;product=hypothetical protein;protein_id=MDY4306906.1;transl_table=11 JAXGFV010000005.1 Genbank gene 101387 102190 . + . ID=gene-SNF32_04435;Name=SNF32_04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04435 JAXGFV010000005.1 Protein Homology CDS 101387 102190 . + 0 ID=cds-MDY4306907.1;Parent=gene-SNF32_04435;Dbxref=NCBI_GP:MDY4306907.1;Name=MDY4306907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736239.1;locus_tag=SNF32_04435;product=WxL domain-containing protein;protein_id=MDY4306907.1;transl_table=11 JAXGFV010000005.1 Genbank gene 102211 103350 . + . ID=gene-SNF32_04440;Name=SNF32_04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04440 JAXGFV010000005.1 Protein Homology CDS 102211 103350 . + 0 ID=cds-MDY4306908.1;Parent=gene-SNF32_04440;Dbxref=NCBI_GP:MDY4306908.1;Name=MDY4306908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736238.1;locus_tag=SNF32_04440;product=DUF916 and DUF3324 domain-containing protein;protein_id=MDY4306908.1;transl_table=11 JAXGFV010000005.1 Genbank gene 103364 106015 . + . ID=gene-SNF32_04445;Name=SNF32_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04445 JAXGFV010000005.1 Protein Homology CDS 103364 106015 . + 0 ID=cds-MDY4306909.1;Parent=gene-SNF32_04445;Dbxref=NCBI_GP:MDY4306909.1;Name=MDY4306909.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042900.1;locus_tag=SNF32_04445;product=pectate lyase-like adhesive domain-containing protein;protein_id=MDY4306909.1;transl_table=11 JAXGFV010000005.1 Genbank gene 106072 107016 . + . ID=gene-SNF32_04450;Name=SNF32_04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04450 JAXGFV010000005.1 GeneMarkS-2+ CDS 106072 107016 . + 0 ID=cds-MDY4306910.1;Parent=gene-SNF32_04450;Dbxref=NCBI_GP:MDY4306910.1;Name=MDY4306910.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04450;product=hypothetical protein;protein_id=MDY4306910.1;transl_table=11 JAXGFV010000005.1 Genbank gene 107022 107927 . + . ID=gene-SNF32_04455;Name=SNF32_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04455 JAXGFV010000005.1 Protein Homology CDS 107022 107927 . + 0 ID=cds-MDY4306911.1;Parent=gene-SNF32_04455;Dbxref=NCBI_GP:MDY4306911.1;Name=MDY4306911.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025108.3;locus_tag=SNF32_04455;product=WxL domain-containing protein;protein_id=MDY4306911.1;transl_table=11 JAXGFV010000005.1 Genbank gene 107944 108231 . + . ID=gene-SNF32_04460;Name=SNF32_04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04460 JAXGFV010000005.1 Protein Homology CDS 107944 108231 . + 0 ID=cds-MDY4306912.1;Parent=gene-SNF32_04460;Dbxref=NCBI_GP:MDY4306912.1;Name=MDY4306912.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025108.3;locus_tag=SNF32_04460;product=WxL domain-containing protein;protein_id=MDY4306912.1;transl_table=11 JAXGFV010000005.1 Genbank gene 108517 108783 . - . ID=gene-SNF32_04465;Name=SNF32_04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04465 JAXGFV010000005.1 GeneMarkS-2+ CDS 108517 108783 . - 0 ID=cds-MDY4306913.1;Parent=gene-SNF32_04465;Dbxref=NCBI_GP:MDY4306913.1;Name=MDY4306913.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04465;product=hypothetical protein;protein_id=MDY4306913.1;transl_table=11 JAXGFV010000005.1 Genbank gene 108881 109411 . - . ID=gene-SNF32_04470;Name=SNF32_04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04470 JAXGFV010000005.1 GeneMarkS-2+ CDS 108881 109411 . - 0 ID=cds-MDY4306914.1;Parent=gene-SNF32_04470;Dbxref=NCBI_GP:MDY4306914.1;Name=MDY4306914.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04470;product=hypothetical protein;protein_id=MDY4306914.1;transl_table=11 JAXGFV010000005.1 Genbank gene 109624 109950 . - . ID=gene-SNF32_04475;Name=SNF32_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04475 JAXGFV010000005.1 Protein Homology CDS 109624 109950 . - 0 ID=cds-MDY4306915.1;Parent=gene-SNF32_04475;Dbxref=NCBI_GP:MDY4306915.1;Name=MDY4306915.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019884.3;locus_tag=SNF32_04475;product=HTH domain-containing protein;protein_id=MDY4306915.1;transl_table=11 JAXGFV010000005.1 Genbank gene 110981 111364 . + . ID=gene-SNF32_04480;Name=SNF32_04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04480 JAXGFV010000005.1 Protein Homology CDS 110981 111364 . + 0 ID=cds-MDY4306916.1;Parent=gene-SNF32_04480;Dbxref=NCBI_GP:MDY4306916.1;Name=MDY4306916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005232663.1;locus_tag=SNF32_04480;product=hypothetical protein;protein_id=MDY4306916.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 111900 112524 . + . ID=gene-SNF32_04485;Name=SNF32_04485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04485;pseudo=true JAXGFV010000005.1 Protein Homology CDS 111900 112524 . + 0 ID=cds-SNF32_04485;Parent=gene-SNF32_04485;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005233801.1;locus_tag=SNF32_04485;product=pentapeptide repeat-containing protein;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank gene 112806 113006 . + . ID=gene-SNF32_04490;Name=SNF32_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04490 JAXGFV010000005.1 Protein Homology CDS 112806 113006 . + 0 ID=cds-MDY4306917.1;Parent=gene-SNF32_04490;Dbxref=NCBI_GP:MDY4306917.1;Name=MDY4306917.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016152.3;locus_tag=SNF32_04490;product=MmcQ/YjbR family DNA-binding protein;protein_id=MDY4306917.1;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 113147 113471 . + . ID=gene-SNF32_04495;Name=SNF32_04495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04495;pseudo=true JAXGFV010000005.1 Protein Homology CDS 113147 113471 . + 0 ID=cds-SNF32_04495;Parent=gene-SNF32_04495;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287522.1;locus_tag=SNF32_04495;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 JAXGFV010000005.1 Genbank pseudogene 113514 114659 . + . ID=gene-SNF32_04500;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=pseudogene;locus_tag=SNF32_04500;pseudo=true JAXGFV010000005.1 Protein Homology CDS 113514 114659 . + 0 ID=cds-SNF32_04500;Parent=gene-SNF32_04500;Note=frameshifted;gbkey=CDS;gene=tnpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002349331.1;locus_tag=SNF32_04500;product=IS200/IS605 family element RNA-guided endonuclease TnpB;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000050.1 1 17993 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000050.1 Genbank region 1 17993 . + . ID=JAXGFV010000050.1:1..17993;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000050.1 Genbank gene 625 873 . - . ID=gene-SNF32_14220;Name=SNF32_14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14220 JAXGFV010000050.1 GeneMarkS-2+ CDS 625 873 . - 0 ID=cds-MDY4307904.1;Parent=gene-SNF32_14220;Dbxref=NCBI_GP:MDY4307904.1;Name=MDY4307904.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14220;product=hypothetical protein;protein_id=MDY4307904.1;transl_table=11 JAXGFV010000050.1 Genbank gene 1080 1280 . - . ID=gene-SNF32_14225;Name=SNF32_14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14225 JAXGFV010000050.1 GeneMarkS-2+ CDS 1080 1280 . - 0 ID=cds-MDY4307905.1;Parent=gene-SNF32_14225;Dbxref=NCBI_GP:MDY4307905.1;Name=MDY4307905.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14225;product=hypothetical protein;protein_id=MDY4307905.1;transl_table=11 JAXGFV010000050.1 Genbank gene 1506 1676 . - . ID=gene-SNF32_14230;Name=SNF32_14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14230 JAXGFV010000050.1 GeneMarkS-2+ CDS 1506 1676 . - 0 ID=cds-MDY4307906.1;Parent=gene-SNF32_14230;Dbxref=NCBI_GP:MDY4307906.1;Name=MDY4307906.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14230;product=hypothetical protein;protein_id=MDY4307906.1;transl_table=11 JAXGFV010000050.1 Genbank gene 2966 3136 . - . ID=gene-SNF32_14235;Name=SNF32_14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14235 JAXGFV010000050.1 GeneMarkS-2+ CDS 2966 3136 . - 0 ID=cds-MDY4307907.1;Parent=gene-SNF32_14235;Dbxref=NCBI_GP:MDY4307907.1;Name=MDY4307907.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14235;product=hypothetical protein;protein_id=MDY4307907.1;transl_table=11 JAXGFV010000050.1 Genbank gene 3333 3530 . - . ID=gene-SNF32_14240;Name=SNF32_14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14240 JAXGFV010000050.1 GeneMarkS-2+ CDS 3333 3530 . - 0 ID=cds-MDY4307908.1;Parent=gene-SNF32_14240;Dbxref=NCBI_GP:MDY4307908.1;Name=MDY4307908.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14240;product=hypothetical protein;protein_id=MDY4307908.1;transl_table=11 JAXGFV010000050.1 Genbank gene 4298 4474 . + . ID=gene-SNF32_14245;Name=SNF32_14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14245 JAXGFV010000050.1 GeneMarkS-2+ CDS 4298 4474 . + 0 ID=cds-MDY4307909.1;Parent=gene-SNF32_14245;Dbxref=NCBI_GP:MDY4307909.1;Name=MDY4307909.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14245;product=hypothetical protein;protein_id=MDY4307909.1;transl_table=11 JAXGFV010000050.1 Genbank pseudogene 5223 6205 . - . ID=gene-SNF32_14250;Name=SNF32_14250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14250;pseudo=true JAXGFV010000050.1 Protein Homology CDS 5223 6205 . - 0 ID=cds-SNF32_14250;Parent=gene-SNF32_14250;Note=frameshifted;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722523.1;locus_tag=SNF32_14250;product=biotin--[acetyl-CoA-carboxylase] ligase;pseudo=true;transl_table=11 JAXGFV010000050.1 Genbank pseudogene 6681 10297 . + . ID=gene-SNF32_14255;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=pseudogene;locus_tag=SNF32_14255;pseudo=true JAXGFV010000050.1 Protein Homology CDS 6681 10297 . + 0 ID=cds-SNF32_14255;Parent=gene-SNF32_14255;Note=frameshifted;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002334401.1;locus_tag=SNF32_14255;product=DNA-directed RNA polymerase subunit beta;pseudo=true;transl_table=11 JAXGFV010000050.1 Genbank pseudogene 10378 14027 . + . ID=gene-SNF32_14260;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=pseudogene;locus_tag=SNF32_14260;pseudo=true JAXGFV010000050.1 Protein Homology CDS 10378 14027 . + 0 ID=cds-SNF32_14260;Parent=gene-SNF32_14260;Note=frameshifted;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002340553.1;locus_tag=SNF32_14260;product=DNA-directed RNA polymerase subunit beta';pseudo=true;transl_table=11 JAXGFV010000050.1 Genbank gene 14274 14837 . + . ID=gene-SNF32_14265;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=SNF32_14265 JAXGFV010000050.1 Protein Homology CDS 14274 14837 . + 0 ID=cds-MDY4307910.1;Parent=gene-SNF32_14265;Dbxref=NCBI_GP:MDY4307910.1;Name=MDY4307910.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010771963.1;locus_tag=SNF32_14265;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=MDY4307910.1;transl_table=11 JAXGFV010000050.1 Genbank pseudogene 14926 15598 . - . ID=gene-SNF32_14270;Name=SNF32_14270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14270;pseudo=true JAXGFV010000050.1 Protein Homology CDS 14926 15598 . - 0 ID=cds-SNF32_14270;Parent=gene-SNF32_14270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722520.1;locus_tag=SNF32_14270;product=prepilin peptidase;pseudo=true;transl_table=11 JAXGFV010000050.1 Genbank pseudogene 15653 17205 . + . ID=gene-SNF32_14275;Name=SNF32_14275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14275;pseudo=true JAXGFV010000050.1 Protein Homology CDS 15653 17205 . + 0 ID=cds-SNF32_14275;Parent=gene-SNF32_14275;Note=frameshifted;Ontology_term=GO:0016310,GO:0046177,GO:0005524,GO:0046316;gbkey=CDS;go_function=ATP binding|0005524||IEA,gluconokinase activity|0046316||IEA;go_process=phosphorylation|0016310||IEA,D-gluconate catabolic process|0046177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722519.1;locus_tag=SNF32_14275;product=gluconokinase;pseudo=true;transl_table=11 JAXGFV010000050.1 Genbank gene 17370 17837 . + . ID=gene-SNF32_14280;Name=SNF32_14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14280 JAXGFV010000050.1 Protein Homology CDS 17370 17837 . + 0 ID=cds-MDY4307911.1;Parent=gene-SNF32_14280;Dbxref=NCBI_GP:MDY4307911.1;Name=MDY4307911.1;Ontology_term=GO:0008199,GO:0016491;gbkey=CDS;go_function=ferric iron binding|0008199||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002342326.1;locus_tag=SNF32_14280;product=Dps family protein;protein_id=MDY4307911.1;transl_table=11 ##sequence-region JAXGFV010000051.1 1 17900 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000051.1 Genbank region 1 17900 . + . ID=JAXGFV010000051.1:1..17900;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000051.1 Genbank pseudogene 131 672 . - . ID=gene-SNF32_14285;Name=aac(6');gbkey=Gene;gene=aac(6');gene_biotype=pseudogene;locus_tag=SNF32_14285;pseudo=true JAXGFV010000051.1 Protein Homology CDS 131 672 . - 0 ID=cds-SNF32_14285;Parent=gene-SNF32_14285;Note=frameshifted;Ontology_term=GO:0008080;gbkey=CDS;gene=aac(6');go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722502.1;locus_tag=SNF32_14285;product=aminoglycoside N-acetyltransferase AAC(6')-Ii;pseudo=true;transl_table=11 JAXGFV010000051.1 Genbank pseudogene 708 1828 . - . ID=gene-SNF32_14290;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=pseudogene;locus_tag=SNF32_14290;pseudo=true JAXGFV010000051.1 Protein Homology CDS 708 1828 . - 0 ID=cds-SNF32_14290;Parent=gene-SNF32_14290;Note=frameshifted;Ontology_term=GO:0031167,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736158.1;locus_tag=SNF32_14290;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;pseudo=true;transl_table=11 JAXGFV010000051.1 Genbank gene 2649 2780 . - . ID=gene-SNF32_14295;Name=SNF32_14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14295 JAXGFV010000051.1 GeneMarkS-2+ CDS 2649 2780 . - 0 ID=cds-MDY4307912.1;Parent=gene-SNF32_14295;Dbxref=NCBI_GP:MDY4307912.1;Name=MDY4307912.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14295;product=hypothetical protein;protein_id=MDY4307912.1;transl_table=11 JAXGFV010000051.1 Genbank pseudogene 3242 5678 . - . ID=gene-SNF32_14300;Name=SNF32_14300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14300;pseudo=true JAXGFV010000051.1 Protein Homology CDS 3242 5678 . - 0 ID=cds-SNF32_14300;Parent=gene-SNF32_14300;Note=frameshifted;Ontology_term=GO:0003677,GO:0005524,GO:0015616;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,DNA translocase activity|0015616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002344000.1;locus_tag=SNF32_14300;product=DNA translocase FtsK;pseudo=true;transl_table=11 JAXGFV010000051.1 Genbank gene 6255 6449 . + . ID=gene-SNF32_14305;Name=SNF32_14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14305 JAXGFV010000051.1 GeneMarkS-2+ CDS 6255 6449 . + 0 ID=cds-MDY4307913.1;Parent=gene-SNF32_14305;Dbxref=NCBI_GP:MDY4307913.1;Name=MDY4307913.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14305;product=hypothetical protein;protein_id=MDY4307913.1;transl_table=11 JAXGFV010000051.1 Genbank gene 6677 7057 . + . ID=gene-SNF32_14310;Name=SNF32_14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14310 JAXGFV010000051.1 GeneMarkS-2+ CDS 6677 7057 . + 0 ID=cds-MDY4307914.1;Parent=gene-SNF32_14310;Dbxref=NCBI_GP:MDY4307914.1;Name=MDY4307914.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14310;product=hypothetical protein;protein_id=MDY4307914.1;transl_table=11 JAXGFV010000051.1 Genbank gene 7054 7638 . + . ID=gene-SNF32_14315;Name=SNF32_14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14315 JAXGFV010000051.1 Protein Homology CDS 7054 7638 . + 0 ID=cds-MDY4307915.1;Parent=gene-SNF32_14315;Dbxref=NCBI_GP:MDY4307915.1;Name=MDY4307915.1;Ontology_term=GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: protein motif:HMM:NF025563.3;locus_tag=SNF32_14315;product=RICIN domain-containing protein;protein_id=MDY4307915.1;transl_table=11 JAXGFV010000051.1 Genbank pseudogene 7773 9214 . - . ID=gene-SNF32_14320;Name=SNF32_14320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14320;pseudo=true JAXGFV010000051.1 Protein Homology CDS 7773 9214 . - 0 ID=cds-SNF32_14320;Parent=gene-SNF32_14320;Note=frameshifted;Ontology_term=GO:0005975,GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736163.1;locus_tag=SNF32_14320;product=glycoside hydrolase family 1 protein;pseudo=true;transl_table=11 JAXGFV010000051.1 Genbank pseudogene 9419 10200 . - . ID=gene-SNF32_14325;Name=SNF32_14325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14325;pseudo=true JAXGFV010000051.1 Protein Homology CDS 9419 10200 . - 0 ID=cds-SNF32_14325;Parent=gene-SNF32_14325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010720795.1;locus_tag=SNF32_14325;product=amino acid ABC transporter substrate-binding protein;pseudo=true;transl_table=11 JAXGFV010000051.1 Genbank gene 10244 10870 . - . ID=gene-SNF32_14330;Name=SNF32_14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14330 JAXGFV010000051.1 Protein Homology CDS 10244 10870 . - 0 ID=cds-MDY4307916.1;Parent=gene-SNF32_14330;Dbxref=NCBI_GP:MDY4307916.1;Name=MDY4307916.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010720796.1;locus_tag=SNF32_14330;product=ATP-binding cassette domain-containing protein;protein_id=MDY4307916.1;transl_table=11 JAXGFV010000051.1 Genbank gene 10899 11540 . - . ID=gene-SNF32_14335;Name=SNF32_14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14335 JAXGFV010000051.1 Protein Homology CDS 10899 11540 . - 0 ID=cds-MDY4307917.1;Parent=gene-SNF32_14335;Dbxref=NCBI_GP:MDY4307917.1;Name=MDY4307917.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002293344.1;locus_tag=SNF32_14335;product=amino acid ABC transporter permease;protein_id=MDY4307917.1;transl_table=11 JAXGFV010000051.1 cmsearch binding_site 11632 11861 . - . ID=id-JAXGFV010000051.1:11632..11861;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.4 JAXGFV010000051.1 Genbank pseudogene 11952 12436 . + . ID=gene-SNF32_14340;Name=SNF32_14340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14340;pseudo=true JAXGFV010000051.1 Protein Homology CDS 11952 12436 . + 0 ID=cds-SNF32_14340;Parent=gene-SNF32_14340;Note=frameshifted;Ontology_term=GO:0002161;gbkey=CDS;go_function=aminoacyl-tRNA editing activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002289239.1;locus_tag=SNF32_14340;product=YbaK/EbsC family protein;pseudo=true;transl_table=11 JAXGFV010000051.1 Genbank pseudogene 12438 14507 . - . ID=gene-SNF32_14345;Name=SNF32_14345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14345;pseudo=true JAXGFV010000051.1 Protein Homology CDS 12438 14507 . - 0 ID=cds-SNF32_14345;Parent=gene-SNF32_14345;Note=frameshifted;Ontology_term=GO:0006261,GO:0006265,GO:0006310,GO:0051304,GO:0003917,GO:0098847;gbkey=CDS;go_function=DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA,sequence-specific single stranded DNA binding|0098847||IEA;go_process=DNA-templated DNA replication|0006261||IEA,DNA topological change|0006265||IEA,DNA recombination|0006310||IEA,chromosome separation|0051304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016174178.1;locus_tag=SNF32_14345;product=DNA topoisomerase III;pseudo=true;transl_table=11 JAXGFV010000051.1 Genbank gene 14440 14817 . - . ID=gene-SNF32_14350;Name=SNF32_14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14350 JAXGFV010000051.1 Protein Homology CDS 14440 14817 . - 0 ID=cds-MDY4307918.1;Parent=gene-SNF32_14350;Dbxref=NCBI_GP:MDY4307918.1;Name=MDY4307918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002312065.1;locus_tag=SNF32_14350;product=DUF1033 family protein;protein_id=MDY4307918.1;transl_table=11 JAXGFV010000051.1 Genbank pseudogene 14942 15507 . - . ID=gene-SNF32_14355;Name=SNF32_14355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14355;pseudo=true JAXGFV010000051.1 Protein Homology CDS 14942 15507 . - 0 ID=cds-SNF32_14355;Parent=gene-SNF32_14355;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010720801.1;locus_tag=SNF32_14355;product=WHG domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000051.1 Genbank pseudogene 15655 16914 . + . ID=gene-SNF32_14360;Name=SNF32_14360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14360;pseudo=true JAXGFV010000051.1 Protein Homology CDS 15655 16914 . + 0 ID=cds-SNF32_14360;Parent=gene-SNF32_14360;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724370.1;locus_tag=SNF32_14360;product=multidrug efflux MFS transporter;pseudo=true;transl_table=11 JAXGFV010000051.1 Genbank pseudogene 16962 17900 . - . ID=gene-SNF32_14365;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=pseudogene;locus_tag=SNF32_14365;pseudo=true JAXGFV010000051.1 Protein Homology CDS 16962 17900 . - 2 ID=cds-SNF32_14365;Parent=gene-SNF32_14365;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005880185.1;locus_tag=SNF32_14365;product=tRNA 2-thiouridine(34) synthase MnmA;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000052.1 1 17780 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000052.1 Genbank region 1 17780 . + . ID=JAXGFV010000052.1:1..17780;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000052.1 Genbank pseudogene 109 1040 . - . ID=gene-SNF32_14370;Name=SNF32_14370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14370;pseudo=true JAXGFV010000052.1 Protein Homology CDS 109 1040 . - 0 ID=cds-SNF32_14370;Parent=gene-SNF32_14370;Note=frameshifted;Ontology_term=GO:0006826,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724477.1;locus_tag=SNF32_14370;product=iron ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000052.1 Genbank pseudogene 1105 2121 . - . ID=gene-SNF32_14375;Name=SNF32_14375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14375;pseudo=true JAXGFV010000052.1 Protein Homology CDS 1105 2121 . - 0 ID=cds-SNF32_14375;Parent=gene-SNF32_14375;Note=frameshifted;Ontology_term=GO:0006826,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010752160.1;locus_tag=SNF32_14375;product=iron ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000052.1 Genbank pseudogene 2090 2886 . - . ID=gene-SNF32_14380;Name=SNF32_14380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14380;pseudo=true JAXGFV010000052.1 Protein Homology CDS 2090 2886 . - 0 ID=cds-SNF32_14380;Parent=gene-SNF32_14380;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735135.1;locus_tag=SNF32_14380;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000052.1 Genbank gene 3052 4008 . + . ID=gene-SNF32_14385;Name=SNF32_14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14385 JAXGFV010000052.1 Protein Homology CDS 3052 4008 . + 0 ID=cds-MDY4307919.1;Parent=gene-SNF32_14385;Dbxref=NCBI_GP:MDY4307919.1;Name=MDY4307919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735134.1;locus_tag=SNF32_14385;product=iron-hydroxamate ABC transporter substrate-binding protein;protein_id=MDY4307919.1;transl_table=11 JAXGFV010000052.1 Genbank pseudogene 4161 4843 . - . ID=gene-SNF32_14390;Name=SNF32_14390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14390;pseudo=true JAXGFV010000052.1 Protein Homology CDS 4161 4843 . - 0 ID=cds-SNF32_14390;Parent=gene-SNF32_14390;Note=frameshifted;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735133.1;locus_tag=SNF32_14390;product=response regulator transcription factor;pseudo=true;transl_table=11 JAXGFV010000052.1 Genbank pseudogene 4821 7415 . - . ID=gene-SNF32_14395;Name=SNF32_14395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14395;pseudo=true JAXGFV010000052.1 Protein Homology CDS 4821 7415 . - 0 ID=cds-SNF32_14395;Parent=gene-SNF32_14395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016620533.1;locus_tag=SNF32_14395;product=sensor histidine kinase KdpD;pseudo=true;transl_table=11 JAXGFV010000052.1 Genbank gene 7467 7988 . - . ID=gene-SNF32_14400;Name=SNF32_14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14400 JAXGFV010000052.1 Protein Homology CDS 7467 7988 . - 0 ID=cds-MDY4307920.1;Parent=gene-SNF32_14400;Dbxref=NCBI_GP:MDY4307920.1;Name=MDY4307920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723987.1;locus_tag=SNF32_14400;product=potassium-transporting ATPase subunit C;protein_id=MDY4307920.1;transl_table=11 JAXGFV010000052.1 Genbank pseudogene 8025 10051 . - . ID=gene-SNF32_14405;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=pseudogene;locus_tag=SNF32_14405;pseudo=true JAXGFV010000052.1 Protein Homology CDS 8025 10051 . - 0 ID=cds-SNF32_14405;Parent=gene-SNF32_14405;Note=frameshifted;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpB;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002382885.1;locus_tag=SNF32_14405;product=potassium-transporting ATPase subunit KdpB;pseudo=true;transl_table=11 JAXGFV010000052.1 Genbank pseudogene 10067 11738 . - . ID=gene-SNF32_14410;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=pseudogene;locus_tag=SNF32_14410;pseudo=true JAXGFV010000052.1 Protein Homology CDS 10067 11738 . - 0 ID=cds-SNF32_14410;Parent=gene-SNF32_14410;Note=frameshifted;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010779227.1;locus_tag=SNF32_14410;product=potassium-transporting ATPase subunit KdpA;pseudo=true;transl_table=11 JAXGFV010000052.1 Genbank pseudogene 12053 12543 . - . ID=gene-SNF32_14415;Name=SNF32_14415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14415;pseudo=true JAXGFV010000052.1 Protein Homology CDS 12053 12543 . - 0 ID=cds-SNF32_14415;Parent=gene-SNF32_14415;Note=frameshifted;Ontology_term=GO:0004146,GO:0005542,GO:0050661;gbkey=CDS;go_function=dihydrofolate reductase activity|0004146||IEA,folic acid binding|0005542||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735128.1;locus_tag=SNF32_14415;product=dihydrofolate reductase;pseudo=true;transl_table=11 JAXGFV010000052.1 Genbank pseudogene 12625 12773 . - . ID=gene-SNF32_14420;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=pseudogene;locus_tag=SNF32_14420;pseudo=true JAXGFV010000052.1 Protein Homology CDS 12625 12773 . - 0 ID=cds-SNF32_14420;Parent=gene-SNF32_14420;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016172256.1;locus_tag=SNF32_14420;product=50S ribosomal protein L33;pseudo=true;transl_table=11 JAXGFV010000052.1 Genbank pseudogene 13005 13471 . + . ID=gene-SNF32_14425;Name=SNF32_14425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14425;pseudo=true JAXGFV010000052.1 Protein Homology CDS 13005 13471 . + 0 ID=cds-SNF32_14425;Parent=gene-SNF32_14425;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010014462.1;locus_tag=SNF32_14425;product=DUF2188 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000052.1 Genbank pseudogene 13576 15466 . - . ID=gene-SNF32_14430;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=pseudogene;locus_tag=SNF32_14430;pseudo=true JAXGFV010000052.1 Protein Homology CDS 13576 15466 . - 0 ID=cds-SNF32_14430;Parent=gene-SNF32_14430;Note=frameshifted;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016176439.1;locus_tag=SNF32_14430;product=asparagine synthase (glutamine-hydrolyzing);pseudo=true;transl_table=11 JAXGFV010000052.1 Genbank gene 16114 16683 . + . ID=gene-SNF32_14435;Name=SNF32_14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14435 JAXGFV010000052.1 GeneMarkS-2+ CDS 16114 16683 . + 0 ID=cds-MDY4307921.1;Parent=gene-SNF32_14435;Dbxref=NCBI_GP:MDY4307921.1;Name=MDY4307921.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14435;product=hypothetical protein;protein_id=MDY4307921.1;transl_table=11 JAXGFV010000052.1 Genbank gene 17484 17571 . - . ID=gene-SNF32_14440;Name=SNF32_14440;gbkey=Gene;gene_biotype=tRNA;locus_tag=SNF32_14440 JAXGFV010000052.1 tRNAscan-SE tRNA 17484 17571 . - . ID=rna-SNF32_14440;Parent=gene-SNF32_14440;anticodon=(pos:complement(17537..17539));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_14440;product=tRNA-Ser JAXGFV010000052.1 tRNAscan-SE exon 17484 17571 . - . ID=exon-SNF32_14440-1;Parent=rna-SNF32_14440;anticodon=(pos:complement(17537..17539));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_14440;product=tRNA-Ser ##sequence-region JAXGFV010000053.1 1 17473 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000053.1 Genbank region 1 17473 . + . ID=JAXGFV010000053.1:1..17473;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000053.1 Genbank pseudogene 207 2611 . - . ID=gene-SNF32_14445;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=pseudogene;locus_tag=SNF32_14445;pseudo=true JAXGFV010000053.1 Protein Homology CDS 207 2611 . - 0 ID=cds-SNF32_14445;Parent=gene-SNF32_14445;Note=frameshifted;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722570.1;locus_tag=SNF32_14445;product=leucine--tRNA ligase;pseudo=true;transl_table=11 JAXGFV010000053.1 cmsearch binding_site 2700 2910 . - . ID=id-JAXGFV010000053.1:2700..2910;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.4 JAXGFV010000053.1 Genbank pseudogene 2983 5027 . - . ID=gene-SNF32_14450;Name=SNF32_14450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14450;pseudo=true JAXGFV010000053.1 Protein Homology CDS 2983 5027 . - 0 ID=cds-SNF32_14450;Parent=gene-SNF32_14450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734140.1;locus_tag=SNF32_14450;product=LysM peptidoglycan-binding domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000053.1 Genbank pseudogene 5392 6047 . + . ID=gene-SNF32_14455;Name=SNF32_14455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14455;pseudo=true JAXGFV010000053.1 Protein Homology CDS 5392 6047 . + 0 ID=cds-SNF32_14455;Parent=gene-SNF32_14455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734138.1;locus_tag=SNF32_14455;product=phosphatase PAP2 family protein;pseudo=true;transl_table=11 JAXGFV010000053.1 Genbank pseudogene 6047 7006 . + . ID=gene-SNF32_14460;Name=SNF32_14460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14460;pseudo=true JAXGFV010000053.1 Protein Homology CDS 6047 7006 . + 0 ID=cds-SNF32_14460;Parent=gene-SNF32_14460;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.%3B frameshifted;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734137.1;locus_tag=SNF32_14460;product=TIGR01212 family radical SAM protein;pseudo=true;transl_table=11 JAXGFV010000053.1 Genbank pseudogene 7000 7595 . + . ID=gene-SNF32_14465;Name=SNF32_14465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14465;pseudo=true JAXGFV010000053.1 Protein Homology CDS 7000 7595 . + 0 ID=cds-SNF32_14465;Parent=gene-SNF32_14465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002297285.1;locus_tag=SNF32_14465;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 JAXGFV010000053.1 Genbank gene 7805 8164 . - . ID=gene-SNF32_14470;Name=SNF32_14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14470 JAXGFV010000053.1 Protein Homology CDS 7805 8164 . - 0 ID=cds-MDY4307922.1;Parent=gene-SNF32_14470;Dbxref=NCBI_GP:MDY4307922.1;Name=MDY4307922.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037267.3;locus_tag=SNF32_14470;product=DUF5626 family protein;protein_id=MDY4307922.1;transl_table=11 JAXGFV010000053.1 Genbank pseudogene 9370 11138 . - . ID=gene-SNF32_14475;Name=SNF32_14475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14475;pseudo=true JAXGFV010000053.1 Protein Homology CDS 9370 11138 . - 0 ID=cds-SNF32_14475;Parent=gene-SNF32_14475;Note=frameshifted;Ontology_term=GO:0005524,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010762530.1;locus_tag=SNF32_14475;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000053.1 Genbank pseudogene 11141 12879 . - . ID=gene-SNF32_14480;Name=SNF32_14480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14480;pseudo=true JAXGFV010000053.1 Protein Homology CDS 11141 12879 . - 0 ID=cds-SNF32_14480;Parent=gene-SNF32_14480;Note=frameshifted;Ontology_term=GO:0005524,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016624902.1;locus_tag=SNF32_14480;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000053.1 Genbank gene 13193 13729 . - . ID=gene-SNF32_14485;Name=SNF32_14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14485 JAXGFV010000053.1 Protein Homology CDS 13193 13729 . - 0 ID=cds-MDY4307923.1;Parent=gene-SNF32_14485;Dbxref=NCBI_GP:MDY4307923.1;Name=MDY4307923.1;Ontology_term=GO:0047617;gbkey=CDS;go_function=acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016184862.1;locus_tag=SNF32_14485;product=acyl-CoA thioesterase;protein_id=MDY4307923.1;transl_table=11 JAXGFV010000053.1 Genbank pseudogene 13736 14525 . - . ID=gene-SNF32_14490;Name=SNF32_14490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14490;pseudo=true JAXGFV010000053.1 Protein Homology CDS 13736 14525 . - 0 ID=cds-SNF32_14490;Parent=gene-SNF32_14490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724019.1;locus_tag=SNF32_14490;product=alpha/beta hydrolase family protein;pseudo=true;transl_table=11 JAXGFV010000053.1 Genbank gene 14597 15580 . - . ID=gene-SNF32_14495;Name=SNF32_14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14495 JAXGFV010000053.1 Protein Homology CDS 14597 15580 . - 0 ID=cds-MDY4307924.1;Parent=gene-SNF32_14495;Dbxref=NCBI_GP:MDY4307924.1;Name=MDY4307924.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.3;locus_tag=SNF32_14495;product=MFS transporter;protein_id=MDY4307924.1;transl_table=11 JAXGFV010000053.1 Genbank gene 15535 15663 . - . ID=gene-SNF32_14500;Name=SNF32_14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14500 JAXGFV010000053.1 GeneMarkS-2+ CDS 15535 15663 . - 0 ID=cds-MDY4307925.1;Parent=gene-SNF32_14500;Dbxref=NCBI_GP:MDY4307925.1;Name=MDY4307925.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14500;product=hypothetical protein;protein_id=MDY4307925.1;transl_table=11 JAXGFV010000053.1 Genbank gene 15761 16057 . - . ID=gene-SNF32_14505;Name=SNF32_14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14505 JAXGFV010000053.1 Protein Homology CDS 15761 16057 . - 0 ID=cds-MDY4307926.1;Parent=gene-SNF32_14505;Dbxref=NCBI_GP:MDY4307926.1;Name=MDY4307926.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.3;locus_tag=SNF32_14505;product=MFS transporter;protein_id=MDY4307926.1;transl_table=11 JAXGFV010000053.1 Genbank pseudogene 16243 17434 . - . ID=gene-SNF32_14510;Name=metK;gbkey=Gene;gene=metK;gene_biotype=pseudogene;locus_tag=SNF32_14510;pseudo=true JAXGFV010000053.1 Protein Homology CDS 16243 17434 . - 0 ID=cds-SNF32_14510;Parent=gene-SNF32_14510;Note=frameshifted;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002318393.1;locus_tag=SNF32_14510;product=methionine adenosyltransferase;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000054.1 1 16891 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000054.1 Genbank region 1 16891 . + . ID=JAXGFV010000054.1:1..16891;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000054.1 Genbank gene 1 929 . - . ID=gene-SNF32_14515;Name=SNF32_14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14515;partial=true;start_range=.,1 JAXGFV010000054.1 Protein Homology CDS 1 929 . - 0 ID=cds-MDY4307927.1;Parent=gene-SNF32_14515;Dbxref=NCBI_GP:MDY4307927.1;Name=MDY4307927.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04215.1;locus_tag=SNF32_14515;partial=true;product=collagen-binding domain-containing protein;protein_id=MDY4307927.1;start_range=.,1;transl_table=11 JAXGFV010000054.1 Genbank pseudogene 1334 1898 . - . ID=gene-SNF32_14520;Name=SNF32_14520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14520;pseudo=true JAXGFV010000054.1 Protein Homology CDS 1334 1898 . - 0 ID=cds-SNF32_14520;Parent=gene-SNF32_14520;Note=frameshifted;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002306107.1;locus_tag=SNF32_14520;product=N-acetyltransferase;pseudo=true;transl_table=11 JAXGFV010000054.1 Genbank gene 2206 2454 . - . ID=gene-SNF32_14525;Name=SNF32_14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14525 JAXGFV010000054.1 GeneMarkS-2+ CDS 2206 2454 . - 0 ID=cds-MDY4307928.1;Parent=gene-SNF32_14525;Dbxref=NCBI_GP:MDY4307928.1;Name=MDY4307928.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14525;product=hypothetical protein;protein_id=MDY4307928.1;transl_table=11 JAXGFV010000054.1 Genbank gene 2460 2840 . - . ID=gene-SNF32_14530;Name=SNF32_14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14530 JAXGFV010000054.1 GeneMarkS-2+ CDS 2460 2840 . - 0 ID=cds-MDY4307929.1;Parent=gene-SNF32_14530;Dbxref=NCBI_GP:MDY4307929.1;Name=MDY4307929.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14530;product=hypothetical protein;protein_id=MDY4307929.1;transl_table=11 JAXGFV010000054.1 Genbank pseudogene 2803 3181 . - . ID=gene-SNF32_14535;Name=SNF32_14535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14535;pseudo=true JAXGFV010000054.1 Protein Homology CDS 2803 3181 . - 0 ID=cds-SNF32_14535;Parent=gene-SNF32_14535;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017644319.1;locus_tag=SNF32_14535;product=VOC family protein;pseudo=true;transl_table=11 JAXGFV010000054.1 Genbank pseudogene 3456 4201 . + . ID=gene-SNF32_14540;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=pseudogene;locus_tag=SNF32_14540;pseudo=true JAXGFV010000054.1 Protein Homology CDS 3456 4201 . + 0 ID=cds-SNF32_14540;Parent=gene-SNF32_14540;Note=frameshifted;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734751.1;locus_tag=SNF32_14540;product=nicotinamide riboside transporter PnuC;pseudo=true;transl_table=11 JAXGFV010000054.1 Genbank pseudogene 4350 5609 . - . ID=gene-SNF32_14545;Name=SNF32_14545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14545;pseudo=true JAXGFV010000054.1 Protein Homology CDS 4350 5609 . - 0 ID=cds-SNF32_14545;Parent=gene-SNF32_14545;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734750.1;locus_tag=SNF32_14545;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000054.1 Genbank pseudogene 5775 6417 . - . ID=gene-SNF32_14550;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=pseudogene;locus_tag=SNF32_14550;pseudo=true JAXGFV010000054.1 Protein Homology CDS 5775 6417 . - 0 ID=cds-SNF32_14550;Parent=gene-SNF32_14550;Note=frameshifted;Ontology_term=GO:0030163;gbkey=CDS;gene=pcp;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734749.1;locus_tag=SNF32_14550;product=pyroglutamyl-peptidase I;pseudo=true;transl_table=11 JAXGFV010000054.1 Genbank pseudogene 6666 7608 . - . ID=gene-SNF32_14555;Name=SNF32_14555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14555;pseudo=true JAXGFV010000054.1 Protein Homology CDS 6666 7608 . - 0 ID=cds-SNF32_14555;Parent=gene-SNF32_14555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002306105.1;locus_tag=SNF32_14555;product=DUF979 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000054.1 Genbank gene 7618 8304 . - . ID=gene-SNF32_14560;Name=SNF32_14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14560 JAXGFV010000054.1 Protein Homology CDS 7618 8304 . - 0 ID=cds-MDY4307930.1;Parent=gene-SNF32_14560;Dbxref=NCBI_GP:MDY4307930.1;Name=MDY4307930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010719881.1;locus_tag=SNF32_14560;product=DUF969 domain-containing protein;protein_id=MDY4307930.1;transl_table=11 JAXGFV010000054.1 Genbank gene 8733 8972 . - . ID=gene-SNF32_14565;Name=SNF32_14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14565 JAXGFV010000054.1 GeneMarkS-2+ CDS 8733 8972 . - 0 ID=cds-MDY4307931.1;Parent=gene-SNF32_14565;Dbxref=NCBI_GP:MDY4307931.1;Name=MDY4307931.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14565;product=hypothetical protein;protein_id=MDY4307931.1;transl_table=11 JAXGFV010000054.1 Genbank gene 8963 9094 . - . ID=gene-SNF32_14570;Name=SNF32_14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14570 JAXGFV010000054.1 GeneMarkS-2+ CDS 8963 9094 . - 0 ID=cds-MDY4307932.1;Parent=gene-SNF32_14570;Dbxref=NCBI_GP:MDY4307932.1;Name=MDY4307932.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14570;product=hypothetical protein;protein_id=MDY4307932.1;transl_table=11 JAXGFV010000054.1 Genbank gene 9241 9501 . - . ID=gene-SNF32_14575;Name=SNF32_14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14575 JAXGFV010000054.1 Protein Homology CDS 9241 9501 . - 0 ID=cds-MDY4307933.1;Parent=gene-SNF32_14575;Dbxref=NCBI_GP:MDY4307933.1;Name=MDY4307933.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017655.3;locus_tag=SNF32_14575;product=TraX family protein;protein_id=MDY4307933.1;transl_table=11 JAXGFV010000054.1 Genbank pseudogene 9844 11264 . - . ID=gene-SNF32_14580;Name=SNF32_14580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14580;pseudo=true JAXGFV010000054.1 Protein Homology CDS 9844 11264 . - 0 ID=cds-SNF32_14580;Parent=gene-SNF32_14580;Note=frameshifted;Ontology_term=GO:0015837,GO:0005275,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=amine transmembrane transporter activity|0005275||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016853071.1;locus_tag=SNF32_14580;product=basic amino acid/polyamine antiporter;pseudo=true;transl_table=11 JAXGFV010000054.1 Genbank gene 11469 11918 . + . ID=gene-SNF32_14585;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=SNF32_14585 JAXGFV010000054.1 Protein Homology CDS 11469 11918 . + 0 ID=cds-MDY4307934.1;Parent=gene-SNF32_14585;Dbxref=NCBI_GP:MDY4307934.1;Name=MDY4307934.1;Ontology_term=GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724427.1;locus_tag=SNF32_14585;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=MDY4307934.1;transl_table=11 JAXGFV010000054.1 Genbank pseudogene 11955 13926 . - . ID=gene-SNF32_14590;Name=SNF32_14590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14590;pseudo=true JAXGFV010000054.1 Protein Homology CDS 11955 13926 . - 0 ID=cds-SNF32_14590;Parent=gene-SNF32_14590;Note=frameshifted;Ontology_term=GO:0009401;gbkey=CDS;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734743.1;locus_tag=SNF32_14590;product=glucose PTS transporter subunit IIA;pseudo=true;transl_table=11 JAXGFV010000054.1 Genbank pseudogene 13940 14832 . - . ID=gene-SNF32_14595;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=pseudogene;locus_tag=SNF32_14595;pseudo=true JAXGFV010000054.1 Protein Homology CDS 13940 14832 . - 0 ID=cds-SNF32_14595;Parent=gene-SNF32_14595;Note=frameshifted;Ontology_term=GO:0006040,GO:0009254,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734742.1;locus_tag=SNF32_14595;product=N-acetylmuramic acid 6-phosphate etherase;pseudo=true;transl_table=11 JAXGFV010000054.1 Genbank gene 14829 15896 . - . ID=gene-SNF32_14600;Name=SNF32_14600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14600 JAXGFV010000054.1 Protein Homology CDS 14829 15896 . - 0 ID=cds-MDY4307935.1;Parent=gene-SNF32_14600;Dbxref=NCBI_GP:MDY4307935.1;Name=MDY4307935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734741.1;locus_tag=SNF32_14600;product=MupG family TIM beta-alpha barrel fold protein;protein_id=MDY4307935.1;transl_table=11 JAXGFV010000054.1 Genbank gene 16164 16436 . - . ID=gene-SNF32_14605;Name=SNF32_14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14605 JAXGFV010000054.1 Protein Homology CDS 16164 16436 . - 0 ID=cds-MDY4307936.1;Parent=gene-SNF32_14605;Dbxref=NCBI_GP:MDY4307936.1;Name=MDY4307936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734740.1;locus_tag=SNF32_14605;product=hypothetical protein;protein_id=MDY4307936.1;transl_table=11 JAXGFV010000054.1 Genbank gene 16456 16761 . - . ID=gene-SNF32_14610;Name=SNF32_14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14610 JAXGFV010000054.1 GeneMarkS-2+ CDS 16456 16761 . - 0 ID=cds-MDY4307937.1;Parent=gene-SNF32_14610;Dbxref=NCBI_GP:MDY4307937.1;Name=MDY4307937.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14610;product=hypothetical protein;protein_id=MDY4307937.1;transl_table=11 ##sequence-region JAXGFV010000055.1 1 16709 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000055.1 Genbank region 1 16709 . + . ID=JAXGFV010000055.1:1..16709;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000055.1 Genbank pseudogene 161 603 . + . ID=gene-SNF32_14615;Name=SNF32_14615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14615;pseudo=true JAXGFV010000055.1 Protein Homology CDS 161 603 . + 0 ID=cds-SNF32_14615;Parent=gene-SNF32_14615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002325070.1;locus_tag=SNF32_14615;product=NUDIX hydrolase;pseudo=true;transl_table=11 JAXGFV010000055.1 Genbank pseudogene 660 1479 . - . ID=gene-SNF32_14620;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=pseudogene;locus_tag=SNF32_14620;pseudo=true JAXGFV010000055.1 Protein Homology CDS 660 1479 . - 0 ID=cds-SNF32_14620;Parent=gene-SNF32_14620;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002358000.1;locus_tag=SNF32_14620;product=sugar-phosphatase;pseudo=true;transl_table=11 JAXGFV010000055.1 Genbank pseudogene 1494 2861 . - . ID=gene-SNF32_14625;Name=SNF32_14625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14625;pseudo=true JAXGFV010000055.1 Protein Homology CDS 1494 2861 . - 0 ID=cds-SNF32_14625;Parent=gene-SNF32_14625;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629448.1;locus_tag=SNF32_14625;product=HD domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000055.1 Genbank pseudogene 2845 3676 . - . ID=gene-SNF32_14630;Name=SNF32_14630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14630;pseudo=true JAXGFV010000055.1 Protein Homology CDS 2845 3676 . - 0 ID=cds-SNF32_14630;Parent=gene-SNF32_14630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734855.1;locus_tag=SNF32_14630;product=lipoate--protein ligase family protein;pseudo=true;transl_table=11 JAXGFV010000055.1 Genbank pseudogene 3883 4313 . + . ID=gene-SNF32_14635;Name=SNF32_14635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14635;pseudo=true JAXGFV010000055.1 Protein Homology CDS 3883 4313 . + 0 ID=cds-SNF32_14635;Parent=gene-SNF32_14635;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002292826.1;locus_tag=SNF32_14635;product=DUF1934 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000055.1 Genbank pseudogene 4388 4997 . + . ID=gene-SNF32_14640;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=pseudogene;locus_tag=SNF32_14640;pseudo=true JAXGFV010000055.1 Protein Homology CDS 4388 4997 . + 0 ID=cds-SNF32_14640;Parent=gene-SNF32_14640;Note=frameshifted;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoE;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005234347.1;locus_tag=SNF32_14640;product=DNA-directed RNA polymerase subunit delta;pseudo=true;transl_table=11 JAXGFV010000055.1 Genbank gene 5277 5675 . + . ID=gene-SNF32_14645;Name=SNF32_14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14645 JAXGFV010000055.1 Protein Homology CDS 5277 5675 . + 0 ID=cds-MDY4307938.1;Parent=gene-SNF32_14645;Dbxref=NCBI_GP:MDY4307938.1;Name=MDY4307938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287845.1;locus_tag=SNF32_14645;product=hypothetical protein;protein_id=MDY4307938.1;transl_table=11 JAXGFV010000055.1 Genbank gene 5977 6606 . + . ID=gene-SNF32_14650;Name=SNF32_14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14650 JAXGFV010000055.1 Protein Homology CDS 5977 6606 . + 0 ID=cds-MDY4307939.1;Parent=gene-SNF32_14650;Dbxref=NCBI_GP:MDY4307939.1;Name=MDY4307939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724552.1;locus_tag=SNF32_14650;product=hypothetical protein;protein_id=MDY4307939.1;transl_table=11 JAXGFV010000055.1 Genbank gene 6713 6784 . - . ID=gene-SNF32_14655;Name=SNF32_14655;gbkey=Gene;gene_biotype=tRNA;locus_tag=SNF32_14655 JAXGFV010000055.1 tRNAscan-SE tRNA 6713 6784 . - . ID=rna-SNF32_14655;Parent=gene-SNF32_14655;anticodon=(pos:complement(6749..6751));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_14655;product=tRNA-Arg JAXGFV010000055.1 tRNAscan-SE exon 6713 6784 . - . ID=exon-SNF32_14655-1;Parent=rna-SNF32_14655;anticodon=(pos:complement(6749..6751));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_14655;product=tRNA-Arg JAXGFV010000055.1 Genbank pseudogene 6842 8166 . + . ID=gene-SNF32_14660;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=pseudogene;locus_tag=SNF32_14660;pseudo=true JAXGFV010000055.1 Protein Homology CDS 6842 8166 . + 0 ID=cds-SNF32_14660;Parent=gene-SNF32_14660;Note=frameshifted;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoN;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737997.1;locus_tag=SNF32_14660;product=RNA polymerase factor sigma-54;pseudo=true;transl_table=11 JAXGFV010000055.1 Genbank pseudogene 8317 9407 . + . ID=gene-SNF32_14665;Name=SNF32_14665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14665;pseudo=true JAXGFV010000055.1 Protein Homology CDS 8317 9407 . + 0 ID=cds-SNF32_14665;Parent=gene-SNF32_14665;Note=frameshifted;Ontology_term=GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002316430.1;locus_tag=SNF32_14665;product=sugar-binding domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000055.1 Genbank gene 9447 10448 . + . ID=gene-SNF32_14670;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=SNF32_14670 JAXGFV010000055.1 Protein Homology CDS 9447 10448 . + 0 ID=cds-MDY4307940.1;Parent=gene-SNF32_14670;Dbxref=NCBI_GP:MDY4307940.1;Name=MDY4307940.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010755973.1;locus_tag=SNF32_14670;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=MDY4307940.1;transl_table=11 JAXGFV010000055.1 Genbank pseudogene 10554 11742 . + . ID=gene-SNF32_14675;Name=SNF32_14675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14675;pseudo=true JAXGFV010000055.1 Protein Homology CDS 10554 11742 . + 0 ID=cds-SNF32_14675;Parent=gene-SNF32_14675;Note=frameshifted;Ontology_term=GO:0006096,GO:0004618,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphoglycerate kinase activity|0004618||IEA,ATP binding|0005524||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005228679.1;locus_tag=SNF32_14675;product=phosphoglycerate kinase;pseudo=true;transl_table=11 JAXGFV010000055.1 Genbank pseudogene 11837 12591 . + . ID=gene-SNF32_14680;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=pseudogene;locus_tag=SNF32_14680;pseudo=true JAXGFV010000055.1 Protein Homology CDS 11837 12591 . + 0 ID=cds-SNF32_14680;Parent=gene-SNF32_14680;Note=frameshifted;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005878431.1;locus_tag=SNF32_14680;product=triose-phosphate isomerase;pseudo=true;transl_table=11 JAXGFV010000055.1 Genbank pseudogene 12708 14005 . + . ID=gene-SNF32_14685;Name=eno;gbkey=Gene;gene=eno;gene_biotype=pseudogene;locus_tag=SNF32_14685;pseudo=true JAXGFV010000055.1 Protein Homology CDS 12708 14005 . + 0 ID=cds-SNF32_14685;Parent=gene-SNF32_14685;Note=frameshifted;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013773781.1;locus_tag=SNF32_14685;product=phosphopyruvate hydratase;pseudo=true;transl_table=11 JAXGFV010000055.1 Genbank gene 14842 15117 . + . ID=gene-SNF32_14690;Name=SNF32_14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14690 JAXGFV010000055.1 GeneMarkS-2+ CDS 14842 15117 . + 0 ID=cds-MDY4307941.1;Parent=gene-SNF32_14690;Dbxref=NCBI_GP:MDY4307941.1;Name=MDY4307941.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14690;product=hypothetical protein;protein_id=MDY4307941.1;transl_table=11 JAXGFV010000055.1 Genbank gene 15165 15293 . + . ID=gene-SNF32_14695;Name=SNF32_14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14695 JAXGFV010000055.1 GeneMarkS-2+ CDS 15165 15293 . + 0 ID=cds-MDY4307942.1;Parent=gene-SNF32_14695;Dbxref=NCBI_GP:MDY4307942.1;Name=MDY4307942.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14695;product=hypothetical protein;protein_id=MDY4307942.1;transl_table=11 JAXGFV010000055.1 Genbank gene 15893 16177 . + . ID=gene-SNF32_14700;Name=SNF32_14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14700 JAXGFV010000055.1 GeneMarkS-2+ CDS 15893 16177 . + 0 ID=cds-MDY4307943.1;Parent=gene-SNF32_14700;Dbxref=NCBI_GP:MDY4307943.1;Name=MDY4307943.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14700;product=hypothetical protein;protein_id=MDY4307943.1;transl_table=11 JAXGFV010000055.1 Genbank gene 16174 16413 . + . ID=gene-SNF32_14705;Name=SNF32_14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14705 JAXGFV010000055.1 Protein Homology CDS 16174 16413 . + 0 ID=cds-MDY4307944.1;Parent=gene-SNF32_14705;Dbxref=NCBI_GP:MDY4307944.1;Name=MDY4307944.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016901.3;locus_tag=SNF32_14705;product=hypothetical protein;protein_id=MDY4307944.1;transl_table=11 JAXGFV010000055.1 Genbank gene 16338 16709 . + . ID=gene-SNF32_14710;Name=SNF32_14710;end_range=16709,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14710;partial=true JAXGFV010000055.1 GeneMarkS-2+ CDS 16338 16709 . + 0 ID=cds-MDY4307945.1;Parent=gene-SNF32_14710;Dbxref=NCBI_GP:MDY4307945.1;Name=MDY4307945.1;end_range=16709,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14710;partial=true;product=hypothetical protein;protein_id=MDY4307945.1;transl_table=11 ##sequence-region JAXGFV010000056.1 1 16564 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000056.1 Genbank region 1 16564 . + . ID=JAXGFV010000056.1:1..16564;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000056.1 Genbank pseudogene 256 1286 . + . ID=gene-SNF32_14715;Name=SNF32_14715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14715;pseudo=true JAXGFV010000056.1 Protein Homology CDS 256 1286 . + 0 ID=cds-SNF32_14715;Parent=gene-SNF32_14715;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734245.1;locus_tag=SNF32_14715;product=zinc-binding dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000056.1 Genbank gene 1641 2414 . + . ID=gene-SNF32_14720;Name=SNF32_14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14720 JAXGFV010000056.1 Protein Homology CDS 1641 2414 . + 0 ID=cds-MDY4307946.1;Parent=gene-SNF32_14720;Dbxref=NCBI_GP:MDY4307946.1;Name=MDY4307946.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF024256.3;locus_tag=SNF32_14720;product=ATP-binding cassette domain-containing protein;protein_id=MDY4307946.1;transl_table=11 JAXGFV010000056.1 Genbank gene 2627 2692 . + . ID=gene-SNF32_14725;Name=SNF32_14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14725 JAXGFV010000056.1 Protein Homology CDS 2627 2692 . + 0 ID=cds-MDY4307947.1;Parent=gene-SNF32_14725;Dbxref=NCBI_GP:MDY4307947.1;Name=MDY4307947.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012235.3;locus_tag=SNF32_14725;product=hypothetical protein;protein_id=MDY4307947.1;transl_table=11 JAXGFV010000056.1 Genbank gene 2689 2997 . + . ID=gene-SNF32_14730;Name=SNF32_14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14730 JAXGFV010000056.1 Protein Homology CDS 2689 2997 . + 0 ID=cds-MDY4307948.1;Parent=gene-SNF32_14730;Dbxref=NCBI_GP:MDY4307948.1;Name=MDY4307948.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.3;locus_tag=SNF32_14730;product=ATP-binding cassette domain-containing protein;protein_id=MDY4307948.1;transl_table=11 JAXGFV010000056.1 Genbank gene 3516 3824 . + . ID=gene-SNF32_14735;Name=SNF32_14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14735 JAXGFV010000056.1 GeneMarkS-2+ CDS 3516 3824 . + 0 ID=cds-MDY4307949.1;Parent=gene-SNF32_14735;Dbxref=NCBI_GP:MDY4307949.1;Name=MDY4307949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14735;product=hypothetical protein;protein_id=MDY4307949.1;transl_table=11 JAXGFV010000056.1 Genbank gene 4093 4734 . + . ID=gene-SNF32_14740;Name=SNF32_14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14740 JAXGFV010000056.1 Protein Homology CDS 4093 4734 . + 0 ID=cds-MDY4307950.1;Parent=gene-SNF32_14740;Dbxref=NCBI_GP:MDY4307950.1;Name=MDY4307950.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF013070.3;locus_tag=SNF32_14740;product=PRD domain-containing protein;protein_id=MDY4307950.1;transl_table=11 JAXGFV010000056.1 Genbank gene 4710 4889 . + . ID=gene-SNF32_14745;Name=SNF32_14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14745 JAXGFV010000056.1 GeneMarkS-2+ CDS 4710 4889 . + 0 ID=cds-MDY4307951.1;Parent=gene-SNF32_14745;Dbxref=NCBI_GP:MDY4307951.1;Name=MDY4307951.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14745;product=hypothetical protein;protein_id=MDY4307951.1;transl_table=11 JAXGFV010000056.1 Genbank gene 4898 5431 . + . ID=gene-SNF32_14750;Name=SNF32_14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14750 JAXGFV010000056.1 Protein Homology CDS 4898 5431 . + 0 ID=cds-MDY4307952.1;Parent=gene-SNF32_14750;Dbxref=NCBI_GP:MDY4307952.1;Name=MDY4307952.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF012579.3;locus_tag=SNF32_14750;product=PTS sugar transporter subunit IIA;protein_id=MDY4307952.1;transl_table=11 JAXGFV010000056.1 Genbank pseudogene 5428 5708 . + . ID=gene-SNF32_14755;Name=SNF32_14755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14755;pseudo=true JAXGFV010000056.1 Protein Homology CDS 5428 5708 . + 0 ID=cds-SNF32_14755;Parent=gene-SNF32_14755;Note=frameshifted;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005227537.1;locus_tag=SNF32_14755;product=PTS sugar transporter subunit IIB;pseudo=true;transl_table=11 JAXGFV010000056.1 Genbank pseudogene 5735 7110 . + . ID=gene-SNF32_14760;Name=SNF32_14760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14760;pseudo=true JAXGFV010000056.1 Protein Homology CDS 5735 7110 . + 0 ID=cds-SNF32_14760;Parent=gene-SNF32_14760;Note=frameshifted;Ontology_term=GO:0009401;gbkey=CDS;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015508967.1;locus_tag=SNF32_14760;product=PTS ascorbate transporter subunit IIC;pseudo=true;transl_table=11 JAXGFV010000056.1 Genbank pseudogene 7107 7977 . + . ID=gene-SNF32_14765;Name=SNF32_14765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14765;pseudo=true JAXGFV010000056.1 Protein Homology CDS 7107 7977 . + 0 ID=cds-SNF32_14765;Parent=gene-SNF32_14765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010756358.1;locus_tag=SNF32_14765;product=transketolase;pseudo=true;transl_table=11 JAXGFV010000056.1 Genbank pseudogene 7965 8910 . + . ID=gene-SNF32_14770;Name=SNF32_14770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14770;pseudo=true JAXGFV010000056.1 Protein Homology CDS 7965 8910 . + 0 ID=cds-SNF32_14770;Parent=gene-SNF32_14770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722329.1;locus_tag=SNF32_14770;product=transketolase C-terminal domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000056.1 Genbank gene 9882 10403 . + . ID=gene-SNF32_14775;Name=SNF32_14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14775 JAXGFV010000056.1 GeneMarkS-2+ CDS 9882 10403 . + 0 ID=cds-MDY4307953.1;Parent=gene-SNF32_14775;Dbxref=NCBI_GP:MDY4307953.1;Name=MDY4307953.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14775;product=hypothetical protein;protein_id=MDY4307953.1;transl_table=11 JAXGFV010000056.1 Genbank gene 10547 10906 . + . ID=gene-SNF32_14780;Name=SNF32_14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14780 JAXGFV010000056.1 GeneMarkS-2+ CDS 10547 10906 . + 0 ID=cds-MDY4307954.1;Parent=gene-SNF32_14780;Dbxref=NCBI_GP:MDY4307954.1;Name=MDY4307954.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14780;product=hypothetical protein;protein_id=MDY4307954.1;transl_table=11 JAXGFV010000056.1 Genbank gene 10959 11147 . + . ID=gene-SNF32_14785;Name=SNF32_14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14785 JAXGFV010000056.1 Protein Homology CDS 10959 11147 . + 0 ID=cds-MDY4307955.1;Parent=gene-SNF32_14785;Dbxref=NCBI_GP:MDY4307955.1;Name=MDY4307955.1;Ontology_term=GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: protein motif:HMM:NF025563.3;locus_tag=SNF32_14785;product=RICIN domain-containing protein;protein_id=MDY4307955.1;transl_table=11 JAXGFV010000056.1 Genbank pseudogene 11248 11911 . - . ID=gene-SNF32_14790;Name=SNF32_14790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14790;pseudo=true JAXGFV010000056.1 Protein Homology CDS 11248 11911 . - 0 ID=cds-SNF32_14790;Parent=gene-SNF32_14790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010738644.1;locus_tag=SNF32_14790;product=DsbA family protein;pseudo=true;transl_table=11 JAXGFV010000056.1 Genbank pseudogene 12025 12599 . - . ID=gene-SNF32_14795;Name=SNF32_14795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14795;pseudo=true JAXGFV010000056.1 Protein Homology CDS 12025 12599 . - 0 ID=cds-SNF32_14795;Parent=gene-SNF32_14795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002373095.1;locus_tag=SNF32_14795;product=CYTH domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000056.1 Genbank pseudogene 12729 13432 . + . ID=gene-SNF32_14800;Name=SNF32_14800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14800;pseudo=true JAXGFV010000056.1 Protein Homology CDS 12729 13432 . + 0 ID=cds-SNF32_14800;Parent=gene-SNF32_14800;Note=frameshifted;Ontology_term=GO:0015969;gbkey=CDS;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002289848.1;locus_tag=SNF32_14800;product=GTP pyrophosphokinase family protein;pseudo=true;transl_table=11 JAXGFV010000056.1 Genbank pseudogene 13410 14205 . + . ID=gene-SNF32_14805;Name=SNF32_14805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14805;pseudo=true JAXGFV010000056.1 Protein Homology CDS 13410 14205 . + 0 ID=cds-SNF32_14805;Parent=gene-SNF32_14805;Note=frameshifted;Ontology_term=GO:0006741,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734258.1;locus_tag=SNF32_14805;product=NAD kinase;pseudo=true;transl_table=11 JAXGFV010000056.1 Genbank pseudogene 14324 15105 . + . ID=gene-SNF32_14810;Name=SNF32_14810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14810;pseudo=true JAXGFV010000056.1 Protein Homology CDS 14324 15105 . + 0 ID=cds-SNF32_14810;Parent=gene-SNF32_14810;Note=frameshifted;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: protein motif:HMM:NF013045.3;locus_tag=SNF32_14810;product=RluA family pseudouridine synthase;pseudo=true;transl_table=11 JAXGFV010000056.1 Genbank pseudogene 15123 16483 . + . ID=gene-SNF32_14815;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=pseudogene;locus_tag=SNF32_14815;pseudo=true JAXGFV010000056.1 Protein Homology CDS 15123 16483 . + 0 ID=cds-SNF32_14815;Parent=gene-SNF32_14815;Note=frameshifted;Ontology_term=GO:0015693,GO:0015095;gbkey=CDS;gene=mgtE;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002294561.1;locus_tag=SNF32_14815;product=magnesium transporter;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000057.1 1 15833 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000057.1 Genbank region 1 15833 . + . ID=JAXGFV010000057.1:1..15833;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000057.1 Genbank gene 73 243 . - . ID=gene-SNF32_14820;Name=SNF32_14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14820 JAXGFV010000057.1 Protein Homology CDS 73 243 . - 0 ID=cds-MDY4307956.1;Parent=gene-SNF32_14820;Dbxref=NCBI_GP:MDY4307956.1;Name=MDY4307956.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021386.3;locus_tag=SNF32_14820;product=DUF2087 domain-containing protein;protein_id=MDY4307956.1;transl_table=11 JAXGFV010000057.1 Genbank pseudogene 452 2263 . - . ID=gene-SNF32_14825;Name=SNF32_14825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14825;pseudo=true JAXGFV010000057.1 Protein Homology CDS 452 2263 . - 0 ID=cds-SNF32_14825;Parent=gene-SNF32_14825;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736364.1;locus_tag=SNF32_14825;product=FtsX-like permease family protein;pseudo=true;transl_table=11 JAXGFV010000057.1 Genbank pseudogene 2278 3029 . - . ID=gene-SNF32_14830;Name=SNF32_14830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14830;pseudo=true JAXGFV010000057.1 Protein Homology CDS 2278 3029 . - 0 ID=cds-SNF32_14830;Parent=gene-SNF32_14830;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002344597.1;locus_tag=SNF32_14830;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000057.1 Genbank pseudogene 3022 3434 . - . ID=gene-SNF32_14835;Name=SNF32_14835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14835;pseudo=true JAXGFV010000057.1 Protein Homology CDS 3022 3434 . - 0 ID=cds-SNF32_14835;Parent=gene-SNF32_14835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722992.1;locus_tag=SNF32_14835;product=YxeA family protein;pseudo=true;transl_table=11 JAXGFV010000057.1 Genbank pseudogene 3610 4477 . - . ID=gene-SNF32_14840;Name=SNF32_14840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14840;pseudo=true JAXGFV010000057.1 Protein Homology CDS 3610 4477 . - 0 ID=cds-SNF32_14840;Parent=gene-SNF32_14840;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736367.1;locus_tag=SNF32_14840;product=SPFH domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000057.1 Genbank pseudogene 4478 4992 . - . ID=gene-SNF32_14845;Name=SNF32_14845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14845;pseudo=true JAXGFV010000057.1 Protein Homology CDS 4478 4992 . - 0 ID=cds-SNF32_14845;Parent=gene-SNF32_14845;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002337561.1;locus_tag=SNF32_14845;product=DUF5348 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000057.1 Genbank gene 5187 5318 . - . ID=gene-SNF32_14850;Name=SNF32_14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14850 JAXGFV010000057.1 GeneMarkS-2+ CDS 5187 5318 . - 0 ID=cds-MDY4307957.1;Parent=gene-SNF32_14850;Dbxref=NCBI_GP:MDY4307957.1;Name=MDY4307957.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14850;product=hypothetical protein;protein_id=MDY4307957.1;transl_table=11 JAXGFV010000057.1 Genbank gene 5365 6048 . - . ID=gene-SNF32_14855;Name=SNF32_14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14855 JAXGFV010000057.1 Protein Homology CDS 5365 6048 . - 0 ID=cds-MDY4307958.1;Parent=gene-SNF32_14855;Dbxref=NCBI_GP:MDY4307958.1;Name=MDY4307958.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024743.3;locus_tag=SNF32_14855;product=DUF4097 family beta strand repeat-containing protein;protein_id=MDY4307958.1;transl_table=11 JAXGFV010000057.1 Genbank gene 6051 6665 . - . ID=gene-SNF32_14860;Name=SNF32_14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14860 JAXGFV010000057.1 Protein Homology CDS 6051 6665 . - 0 ID=cds-MDY4307959.1;Parent=gene-SNF32_14860;Dbxref=NCBI_GP:MDY4307959.1;Name=MDY4307959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328762.1;locus_tag=SNF32_14860;product=DUF1700 domain-containing protein;protein_id=MDY4307959.1;transl_table=11 JAXGFV010000057.1 Genbank pseudogene 6658 6974 . - . ID=gene-SNF32_14865;Name=SNF32_14865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14865;pseudo=true JAXGFV010000057.1 Protein Homology CDS 6658 6974 . - 0 ID=cds-SNF32_14865;Parent=gene-SNF32_14865;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002286315.1;locus_tag=SNF32_14865;product=PadR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000057.1 Genbank gene 7333 7668 . - . ID=gene-SNF32_14870;Name=SNF32_14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14870 JAXGFV010000057.1 Protein Homology CDS 7333 7668 . - 0 ID=cds-MDY4307960.1;Parent=gene-SNF32_14870;Dbxref=NCBI_GP:MDY4307960.1;Name=MDY4307960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722997.1;locus_tag=SNF32_14870;product=hypothetical protein;protein_id=MDY4307960.1;transl_table=11 JAXGFV010000057.1 Genbank pseudogene 7856 8904 . - . ID=gene-SNF32_14875;Name=SNF32_14875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14875;pseudo=true JAXGFV010000057.1 Protein Homology CDS 7856 8904 . - 0 ID=cds-SNF32_14875;Parent=gene-SNF32_14875;Note=frameshifted;Ontology_term=GO:0007165,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002296820.1;locus_tag=SNF32_14875;product=HAMP domain-containing sensor histidine kinase;pseudo=true;transl_table=11 JAXGFV010000057.1 Genbank pseudogene 8915 9582 . - . ID=gene-SNF32_14880;Name=SNF32_14880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14880;pseudo=true JAXGFV010000057.1 Protein Homology CDS 8915 9582 . - 0 ID=cds-SNF32_14880;Parent=gene-SNF32_14880;Note=frameshifted;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002315931.1;locus_tag=SNF32_14880;product=response regulator transcription factor;pseudo=true;transl_table=11 JAXGFV010000057.1 Genbank pseudogene 9727 12056 . + . ID=gene-SNF32_14885;Name=SNF32_14885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14885;pseudo=true JAXGFV010000057.1 Protein Homology CDS 9727 12056 . + 0 ID=cds-SNF32_14885;Parent=gene-SNF32_14885;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002345400.1;locus_tag=SNF32_14885;product=ABC transporter ATP-binding protein/permease;pseudo=true;transl_table=11 JAXGFV010000057.1 Genbank pseudogene 12240 12603 . - . ID=gene-SNF32_14890;Name=SNF32_14890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14890;pseudo=true JAXGFV010000057.1 Protein Homology CDS 12240 12603 . - 0 ID=cds-SNF32_14890;Parent=gene-SNF32_14890;Note=frameshifted;Ontology_term=GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002402395.1;locus_tag=SNF32_14890;product=type II toxin-antitoxin system PemK/MazF family toxin;pseudo=true;transl_table=11 JAXGFV010000057.1 Genbank pseudogene 12593 12822 . - . ID=gene-SNF32_14895;Name=SNF32_14895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14895;pseudo=true JAXGFV010000057.1 Protein Homology CDS 12593 12822 . - 0 ID=cds-SNF32_14895;Parent=gene-SNF32_14895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016609833.1;locus_tag=SNF32_14895;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000057.1 Genbank gene 12976 13683 . - . ID=gene-SNF32_14900;Name=SNF32_14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14900 JAXGFV010000057.1 Protein Homology CDS 12976 13683 . - 0 ID=cds-MDY4307961.1;Parent=gene-SNF32_14900;Dbxref=NCBI_GP:MDY4307961.1;Name=MDY4307961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736378.1;locus_tag=SNF32_14900;product=DUF4811 domain-containing protein;protein_id=MDY4307961.1;transl_table=11 JAXGFV010000057.1 Genbank pseudogene 13680 15150 . - . ID=gene-SNF32_14905;Name=SNF32_14905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14905;pseudo=true JAXGFV010000057.1 Protein Homology CDS 13680 15150 . - 0 ID=cds-SNF32_14905;Parent=gene-SNF32_14905;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008269079.1;locus_tag=SNF32_14905;product=MDR family MFS transporter;pseudo=true;transl_table=11 JAXGFV010000057.1 Genbank gene 15285 15812 . + . ID=gene-SNF32_14910;Name=SNF32_14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14910 JAXGFV010000057.1 Protein Homology CDS 15285 15812 . + 0 ID=cds-MDY4307962.1;Parent=gene-SNF32_14910;Dbxref=NCBI_GP:MDY4307962.1;Name=MDY4307962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010750555.1;locus_tag=SNF32_14910;product=MerR family transcriptional regulator;protein_id=MDY4307962.1;transl_table=11 ##sequence-region JAXGFV010000058.1 1 15744 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000058.1 Genbank region 1 15744 . + . ID=JAXGFV010000058.1:1..15744;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000058.1 Genbank pseudogene 121 440 . - . ID=gene-SNF32_14915;Name=SNF32_14915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14915;pseudo=true JAXGFV010000058.1 Protein Homology CDS 121 440 . - 0 ID=cds-SNF32_14915;Parent=gene-SNF32_14915;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002349170.1;locus_tag=SNF32_14915;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000058.1 Genbank gene 989 1285 . + . ID=gene-SNF32_14920;Name=SNF32_14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14920 JAXGFV010000058.1 Protein Homology CDS 989 1285 . + 0 ID=cds-MDY4307963.1;Parent=gene-SNF32_14920;Dbxref=NCBI_GP:MDY4307963.1;Name=MDY4307963.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017760.3;locus_tag=SNF32_14920;product=MFS transporter;protein_id=MDY4307963.1;transl_table=11 JAXGFV010000058.1 Genbank gene 1270 1575 . + . ID=gene-SNF32_14925;Name=SNF32_14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14925 JAXGFV010000058.1 Protein Homology CDS 1270 1575 . + 0 ID=cds-MDY4307964.1;Parent=gene-SNF32_14925;Dbxref=NCBI_GP:MDY4307964.1;Name=MDY4307964.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019310.3;locus_tag=SNF32_14925;product=hypothetical protein;protein_id=MDY4307964.1;transl_table=11 JAXGFV010000058.1 Genbank gene 1587 1913 . + . ID=gene-SNF32_14930;Name=SNF32_14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14930 JAXGFV010000058.1 GeneMarkS-2+ CDS 1587 1913 . + 0 ID=cds-MDY4307965.1;Parent=gene-SNF32_14930;Dbxref=NCBI_GP:MDY4307965.1;Name=MDY4307965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14930;product=hypothetical protein;protein_id=MDY4307965.1;transl_table=11 JAXGFV010000058.1 Genbank gene 1946 2206 . + . ID=gene-SNF32_14935;Name=SNF32_14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14935 JAXGFV010000058.1 GeneMarkS-2+ CDS 1946 2206 . + 0 ID=cds-MDY4307966.1;Parent=gene-SNF32_14935;Dbxref=NCBI_GP:MDY4307966.1;Name=MDY4307966.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14935;product=hypothetical protein;protein_id=MDY4307966.1;transl_table=11 JAXGFV010000058.1 Genbank pseudogene 3015 3754 . - . ID=gene-SNF32_14940;Name=SNF32_14940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14940;pseudo=true JAXGFV010000058.1 Protein Homology CDS 3015 3754 . - 0 ID=cds-SNF32_14940;Parent=gene-SNF32_14940;Note=frameshifted;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016611358.1;locus_tag=SNF32_14940;product=carbohydrate ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000058.1 Genbank pseudogene 3862 4757 . - . ID=gene-SNF32_14945;Name=SNF32_14945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14945;pseudo=true JAXGFV010000058.1 Protein Homology CDS 3862 4757 . - 0 ID=cds-SNF32_14945;Parent=gene-SNF32_14945;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002393649.1;locus_tag=SNF32_14945;product=sugar ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000058.1 Genbank pseudogene 4994 6238 . - . ID=gene-SNF32_14950;Name=SNF32_14950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14950;pseudo=true JAXGFV010000058.1 Protein Homology CDS 4994 6238 . - 0 ID=cds-SNF32_14950;Parent=gene-SNF32_14950;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010818952.1;locus_tag=SNF32_14950;product=sugar ABC transporter substrate-binding protein;pseudo=true;transl_table=11 JAXGFV010000058.1 Genbank pseudogene 6273 7402 . - . ID=gene-SNF32_14955;Name=SNF32_14955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14955;pseudo=true JAXGFV010000058.1 Protein Homology CDS 6273 7402 . - 0 ID=cds-SNF32_14955;Parent=gene-SNF32_14955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002356837.1;locus_tag=SNF32_14955;product=glycoside hydrolase family 88 protein;pseudo=true;transl_table=11 JAXGFV010000058.1 Genbank gene 7414 9147 . - . ID=gene-SNF32_14960;Name=SNF32_14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14960 JAXGFV010000058.1 Protein Homology CDS 7414 9147 . - 0 ID=cds-MDY4307967.1;Parent=gene-SNF32_14960;Dbxref=NCBI_GP:MDY4307967.1;Name=MDY4307967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010768815.1;locus_tag=SNF32_14960;product=DUF2264 domain-containing protein;protein_id=MDY4307967.1;transl_table=11 JAXGFV010000058.1 Genbank gene 9740 9940 . + . ID=gene-SNF32_14965;Name=SNF32_14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14965 JAXGFV010000058.1 Protein Homology CDS 9740 9940 . + 0 ID=cds-MDY4307968.1;Parent=gene-SNF32_14965;Dbxref=NCBI_GP:MDY4307968.1;Name=MDY4307968.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012576.3;locus_tag=SNF32_14965;product=LacI family DNA-binding transcriptional regulator;protein_id=MDY4307968.1;transl_table=11 JAXGFV010000058.1 Genbank gene 9960 10793 . + . ID=gene-SNF32_14970;Name=SNF32_14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14970 JAXGFV010000058.1 Protein Homology CDS 9960 10793 . + 0 ID=cds-MDY4307969.1;Parent=gene-SNF32_14970;Dbxref=NCBI_GP:MDY4307969.1;Name=MDY4307969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013773320.1;locus_tag=SNF32_14970;product=substrate-binding domain-containing protein;protein_id=MDY4307969.1;transl_table=11 JAXGFV010000058.1 Genbank gene 11043 11450 . - . ID=gene-SNF32_14975;Name=SNF32_14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14975 JAXGFV010000058.1 GeneMarkS-2+ CDS 11043 11450 . - 0 ID=cds-MDY4307970.1;Parent=gene-SNF32_14975;Dbxref=NCBI_GP:MDY4307970.1;Name=MDY4307970.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14975;product=hypothetical protein;protein_id=MDY4307970.1;transl_table=11 JAXGFV010000058.1 Genbank gene 11450 11608 . - . ID=gene-SNF32_14980;Name=SNF32_14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14980 JAXGFV010000058.1 GeneMarkS-2+ CDS 11450 11608 . - 0 ID=cds-MDY4307971.1;Parent=gene-SNF32_14980;Dbxref=NCBI_GP:MDY4307971.1;Name=MDY4307971.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14980;product=hypothetical protein;protein_id=MDY4307971.1;transl_table=11 JAXGFV010000058.1 Genbank gene 11644 12420 . - . ID=gene-SNF32_14985;Name=SNF32_14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14985 JAXGFV010000058.1 GeneMarkS-2+ CDS 11644 12420 . - 0 ID=cds-MDY4307972.1;Parent=gene-SNF32_14985;Dbxref=NCBI_GP:MDY4307972.1;Name=MDY4307972.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_14985;product=hypothetical protein;protein_id=MDY4307972.1;transl_table=11 JAXGFV010000058.1 Genbank pseudogene 12645 13492 . - . ID=gene-SNF32_14990;Name=SNF32_14990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_14990;pseudo=true JAXGFV010000058.1 Protein Homology CDS 12645 13492 . - 0 ID=cds-SNF32_14990;Parent=gene-SNF32_14990;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735831.1;locus_tag=SNF32_14990;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000058.1 Genbank gene 14382 14669 . + . ID=gene-SNF32_14995;Name=SNF32_14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_14995 JAXGFV010000058.1 Protein Homology CDS 14382 14669 . + 0 ID=cds-MDY4307973.1;Parent=gene-SNF32_14995;Dbxref=NCBI_GP:MDY4307973.1;Name=MDY4307973.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016901.3;locus_tag=SNF32_14995;product=helix-turn-helix domain-containing protein;protein_id=MDY4307973.1;transl_table=11 JAXGFV010000058.1 Genbank gene 14882 15040 . + . ID=gene-SNF32_15000;Name=SNF32_15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15000 JAXGFV010000058.1 GeneMarkS-2+ CDS 14882 15040 . + 0 ID=cds-MDY4307974.1;Parent=gene-SNF32_15000;Dbxref=NCBI_GP:MDY4307974.1;Name=MDY4307974.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15000;product=hypothetical protein;protein_id=MDY4307974.1;transl_table=11 JAXGFV010000058.1 Genbank gene 15198 15437 . + . ID=gene-SNF32_15005;Name=SNF32_15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15005 JAXGFV010000058.1 GeneMarkS-2+ CDS 15198 15437 . + 0 ID=cds-MDY4307975.1;Parent=gene-SNF32_15005;Dbxref=NCBI_GP:MDY4307975.1;Name=MDY4307975.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15005;product=hypothetical protein;protein_id=MDY4307975.1;transl_table=11 ##sequence-region JAXGFV010000059.1 1 14498 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000059.1 Genbank region 1 14498 . + . ID=JAXGFV010000059.1:1..14498;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000059.1 Genbank gene 1 88 . - . ID=gene-SNF32_15010;Name=SNF32_15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15010;partial=true;start_range=.,1 JAXGFV010000059.1 Protein Homology CDS 1 88 . - 0 ID=cds-MDY4307976.1;Parent=gene-SNF32_15010;Dbxref=NCBI_GP:MDY4307976.1;Name=MDY4307976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015510573.1;locus_tag=SNF32_15010;partial=true;product=putative holin-like toxin;protein_id=MDY4307976.1;start_range=.,1;transl_table=11 JAXGFV010000059.1 Genbank pseudogene 293 1738 . - . ID=gene-SNF32_15015;Name=SNF32_15015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15015;pseudo=true JAXGFV010000059.1 Protein Homology CDS 293 1738 . - 0 ID=cds-SNF32_15015;Parent=gene-SNF32_15015;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734156.1;locus_tag=SNF32_15015;product=response regulator transcription factor;pseudo=true;transl_table=11 JAXGFV010000059.1 Genbank pseudogene 1728 3471 . - . ID=gene-SNF32_15020;Name=SNF32_15020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15020;pseudo=true JAXGFV010000059.1 Protein Homology CDS 1728 3471 . - 0 ID=cds-SNF32_15020;Parent=gene-SNF32_15020;Note=frameshifted;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734155.1;locus_tag=SNF32_15020;product=sensor histidine kinase;pseudo=true;transl_table=11 JAXGFV010000059.1 Genbank pseudogene 3464 4076 . - . ID=gene-SNF32_15025;Name=SNF32_15025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15025;pseudo=true JAXGFV010000059.1 Protein Homology CDS 3464 4076 . - 0 ID=cds-SNF32_15025;Parent=gene-SNF32_15025;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010782528.1;locus_tag=SNF32_15025;product=DUF624 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000059.1 Genbank pseudogene 4328 5778 . - . ID=gene-SNF32_15030;Name=SNF32_15030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15030;pseudo=true JAXGFV010000059.1 Protein Homology CDS 4328 5778 . - 0 ID=cds-SNF32_15030;Parent=gene-SNF32_15030;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734153.1;locus_tag=SNF32_15030;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 JAXGFV010000059.1 Genbank pseudogene 5812 6730 . - . ID=gene-SNF32_15035;Name=SNF32_15035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15035;pseudo=true JAXGFV010000059.1 Protein Homology CDS 5812 6730 . - 0 ID=cds-SNF32_15035;Parent=gene-SNF32_15035;Note=frameshifted;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002339904.1;locus_tag=SNF32_15035;product=carbohydrate ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000059.1 Genbank pseudogene 6742 7621 . - . ID=gene-SNF32_15040;Name=SNF32_15040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15040;pseudo=true JAXGFV010000059.1 Protein Homology CDS 6742 7621 . - 0 ID=cds-SNF32_15040;Parent=gene-SNF32_15040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016624921.1;locus_tag=SNF32_15040;product=sugar ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000059.1 Genbank gene 7939 8658 . - . ID=gene-SNF32_15045;Name=SNF32_15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15045 JAXGFV010000059.1 Protein Homology CDS 7939 8658 . - 0 ID=cds-MDY4307977.1;Parent=gene-SNF32_15045;Dbxref=NCBI_GP:MDY4307977.1;Name=MDY4307977.1;Ontology_term=GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002374174.1;locus_tag=SNF32_15045;product=pseudouridine synthase;protein_id=MDY4307977.1;transl_table=11 JAXGFV010000059.1 Genbank pseudogene 8690 10337 . - . ID=gene-SNF32_15050;Name=SNF32_15050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15050;pseudo=true JAXGFV010000059.1 Protein Homology CDS 8690 10337 . - 0 ID=cds-SNF32_15050;Parent=gene-SNF32_15050;Note=frameshifted;Ontology_term=GO:0009252,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002285966.1;locus_tag=SNF32_15050;product=polysaccharide biosynthesis protein;pseudo=true;transl_table=11 JAXGFV010000059.1 Genbank pseudogene 10813 12311 . + . ID=gene-SNF32_15055;Name=SNF32_15055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15055;pseudo=true JAXGFV010000059.1 Protein Homology CDS 10813 12311 . + 0 ID=cds-SNF32_15055;Parent=gene-SNF32_15055;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002376413.1;locus_tag=SNF32_15055;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;pseudo=true;transl_table=11 JAXGFV010000059.1 Genbank gene 13095 14450 . - . ID=gene-SNF32_15060;Name=celB;gbkey=Gene;gene=celB;gene_biotype=protein_coding;locus_tag=SNF32_15060 JAXGFV010000059.1 Protein Homology CDS 13095 14450 . - 0 ID=cds-MDY4307978.1;Parent=gene-SNF32_15060;Dbxref=NCBI_GP:MDY4307978.1;Name=MDY4307978.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=celB;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734147.1;locus_tag=SNF32_15060;product=PTS cellobiose transporter subunit IIC;protein_id=MDY4307978.1;transl_table=11 ##sequence-region JAXGFV010000006.1 1 105940 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000006.1 Genbank region 1 105940 . + . ID=JAXGFV010000006.1:1..105940;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000006.1 Genbank pseudogene 58 655 . - . ID=gene-SNF32_04505;Name=SNF32_04505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04505;pseudo=true JAXGFV010000006.1 Protein Homology CDS 58 655 . - 0 ID=cds-SNF32_04505;Parent=gene-SNF32_04505;Note=frameshifted;Ontology_term=GO:0032259,GO:0008168,GO:0008757;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736628.1;locus_tag=SNF32_04505;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 862 1414 . + . ID=gene-SNF32_04510;Name=SNF32_04510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04510;pseudo=true JAXGFV010000006.1 Protein Homology CDS 862 1414 . + 0 ID=cds-SNF32_04510;Parent=gene-SNF32_04510;Note=frameshifted;Ontology_term=GO:0004797;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010769833.1;locus_tag=SNF32_04510;product=thymidine kinase;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 1417 2489 . + . ID=gene-SNF32_04515;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=pseudogene;locus_tag=SNF32_04515;pseudo=true JAXGFV010000006.1 Protein Homology CDS 1417 2489 . + 0 ID=cds-SNF32_04515;Parent=gene-SNF32_04515;Note=frameshifted;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003128515.1;locus_tag=SNF32_04515;product=peptide chain release factor 1;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 2482 3314 . + . ID=gene-SNF32_04520;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=pseudogene;locus_tag=SNF32_04520;pseudo=true JAXGFV010000006.1 Protein Homology CDS 2482 3314 . + 0 ID=cds-SNF32_04520;Parent=gene-SNF32_04520;Note=frameshifted;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723464.1;locus_tag=SNF32_04520;product=peptide chain release factor N(5)-glutamine methyltransferase;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 3501 4564 . + . ID=gene-SNF32_04525;Name=SNF32_04525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04525;pseudo=true JAXGFV010000006.1 Protein Homology CDS 3501 4564 . + 0 ID=cds-SNF32_04525;Parent=gene-SNF32_04525;Note=frameshifted;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016623988.1;locus_tag=SNF32_04525;product=L-threonylcarbamoyladenylate synthase;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 4701 5954 . + . ID=gene-SNF32_04530;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=pseudogene;locus_tag=SNF32_04530;pseudo=true JAXGFV010000006.1 Protein Homology CDS 4701 5954 . + 0 ID=cds-SNF32_04530;Parent=gene-SNF32_04530;Note=frameshifted;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001863152.1;locus_tag=SNF32_04530;product=serine hydroxymethyltransferase;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 6476 7456 . + . ID=gene-SNF32_04535;Name=SNF32_04535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04535;pseudo=true JAXGFV010000006.1 Protein Homology CDS 6476 7456 . + 0 ID=cds-SNF32_04535;Parent=gene-SNF32_04535;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003135347.1;locus_tag=SNF32_04535;product=alpha/beta hydrolase;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 7629 8256 . + . ID=gene-SNF32_04540;Name=upp;gbkey=Gene;gene=upp;gene_biotype=pseudogene;locus_tag=SNF32_04540;pseudo=true JAXGFV010000006.1 Protein Homology CDS 7629 8256 . + 0 ID=cds-SNF32_04540;Parent=gene-SNF32_04540;Note=frameshifted%3B internal stop;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002883819.1;locus_tag=SNF32_04540;product=uracil phosphoribosyltransferase;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank gene 8351 8593 . - . ID=gene-SNF32_04545;Name=SNF32_04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04545 JAXGFV010000006.1 Protein Homology CDS 8351 8593 . - 0 ID=cds-MDY4306918.1;Parent=gene-SNF32_04545;Dbxref=NCBI_GP:MDY4306918.1;Name=MDY4306918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010719992.1;locus_tag=SNF32_04545;product=hypothetical protein;protein_id=MDY4306918.1;transl_table=11 JAXGFV010000006.1 Genbank gene 8713 8785 . + . ID=gene-SNF32_04550;Name=SNF32_04550;gbkey=Gene;gene_biotype=tRNA;locus_tag=SNF32_04550 JAXGFV010000006.1 tRNAscan-SE tRNA 8713 8785 . + . ID=rna-SNF32_04550;Parent=gene-SNF32_04550;anticodon=(pos:8746..8748);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_04550;product=tRNA-Thr JAXGFV010000006.1 tRNAscan-SE exon 8713 8785 . + . ID=exon-SNF32_04550-1;Parent=rna-SNF32_04550;anticodon=(pos:8746..8748);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_04550;product=tRNA-Thr JAXGFV010000006.1 cmsearch riboswitch 9146 9279 . + . ID=id-JAXGFV010000006.1:9146..9279;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch JAXGFV010000006.1 Genbank pseudogene 9389 10460 . + . ID=gene-SNF32_04555;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=pseudogene;locus_tag=SNF32_04555;pseudo=true JAXGFV010000006.1 Protein Homology CDS 9389 10460 . + 0 ID=cds-SNF32_04555;Parent=gene-SNF32_04555;Note=frameshifted;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737162.1;locus_tag=SNF32_04555;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 10445 11066 . + . ID=gene-SNF32_04560;Name=SNF32_04560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04560;pseudo=true JAXGFV010000006.1 Protein Homology CDS 10445 11066 . + 0 ID=cds-SNF32_04560;Parent=gene-SNF32_04560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003126531.1;locus_tag=SNF32_04560;product=riboflavin synthase;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 11059 12232 . + . ID=gene-SNF32_04565;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=pseudogene;locus_tag=SNF32_04565;pseudo=true JAXGFV010000006.1 Protein Homology CDS 11059 12232 . + 0 ID=cds-SNF32_04565;Parent=gene-SNF32_04565;Note=frameshifted;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002331308.1;locus_tag=SNF32_04565;product=GTP cyclohydrolase II;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 12251 12711 . + . ID=gene-SNF32_04570;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=pseudogene;locus_tag=SNF32_04570;pseudo=true JAXGFV010000006.1 Protein Homology CDS 12251 12711 . + 0 ID=cds-SNF32_04570;Parent=gene-SNF32_04570;Note=frameshifted;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002315494.1;locus_tag=SNF32_04570;product=6%2C7-dimethyl-8-ribityllumazine synthase;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 12958 13500 . - . ID=gene-SNF32_04575;Name=SNF32_04575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04575;pseudo=true JAXGFV010000006.1 Protein Homology CDS 12958 13500 . - 0 ID=cds-SNF32_04575;Parent=gene-SNF32_04575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737658.1;locus_tag=SNF32_04575;product=DUF4352 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 14073 14781 . + . ID=gene-SNF32_04580;Name=SNF32_04580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04580;pseudo=true JAXGFV010000006.1 Protein Homology CDS 14073 14781 . + 0 ID=cds-SNF32_04580;Parent=gene-SNF32_04580;Note=frameshifted;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734607.1;locus_tag=SNF32_04580;product=glucosamine-6-phosphate deaminase;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank gene 15076 15201 . + . ID=gene-SNF32_04585;Name=SNF32_04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04585 JAXGFV010000006.1 Protein Homology CDS 15076 15201 . + 0 ID=cds-MDY4306919.1;Parent=gene-SNF32_04585;Dbxref=NCBI_GP:MDY4306919.1;Name=MDY4306919.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013577.3;locus_tag=SNF32_04585;product=hypothetical protein;protein_id=MDY4306919.1;transl_table=11 JAXGFV010000006.1 Genbank gene 15225 15455 . + . ID=gene-SNF32_04590;Name=SNF32_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04590 JAXGFV010000006.1 GeneMarkS-2+ CDS 15225 15455 . + 0 ID=cds-MDY4306920.1;Parent=gene-SNF32_04590;Dbxref=NCBI_GP:MDY4306920.1;Name=MDY4306920.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04590;product=hypothetical protein;protein_id=MDY4306920.1;transl_table=11 JAXGFV010000006.1 Genbank gene 15422 15760 . + . ID=gene-SNF32_04595;Name=SNF32_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04595 JAXGFV010000006.1 Protein Homology CDS 15422 15760 . + 0 ID=cds-MDY4306921.1;Parent=gene-SNF32_04595;Dbxref=NCBI_GP:MDY4306921.1;Name=MDY4306921.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013539.3;locus_tag=SNF32_04595;product=SIS domain-containing protein;protein_id=MDY4306921.1;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 15877 17416 . + . ID=gene-SNF32_04600;Name=malX;gbkey=Gene;gene=malX;gene_biotype=pseudogene;locus_tag=SNF32_04600;pseudo=true JAXGFV010000006.1 Protein Homology CDS 15877 17416 . + 0 ID=cds-SNF32_04600;Parent=gene-SNF32_04600;Note=frameshifted;Ontology_term=GO:0005355,GO:0005363;gbkey=CDS;gene=malX;go_function=glucose transmembrane transporter activity|0005355||IEA,maltose transmembrane transporter activity|0005363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724145.1;locus_tag=SNF32_04600;product=maltose/glucose-specific PTS transporter subunit IIBC;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 17436 18592 . + . ID=gene-SNF32_04605;Name=SNF32_04605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04605;pseudo=true JAXGFV010000006.1 Protein Homology CDS 17436 18592 . + 0 ID=cds-SNF32_04605;Parent=gene-SNF32_04605;Note=frameshifted;Ontology_term=GO:0009086,GO:0004121,GO:0030170;gbkey=CDS;go_function=cystathionine beta-lyase activity|0004121||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002309688.1;locus_tag=SNF32_04605;product=MalY/PatB family protein;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 18679 18813 . + . ID=gene-SNF32_04610;Name=SNF32_04610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04610;pseudo=true JAXGFV010000006.1 Protein Homology CDS 18679 18813 . + 0 ID=cds-SNF32_04610;Parent=gene-SNF32_04610;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558122.1;locus_tag=SNF32_04610;product=IS3 family transposase;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 19149 20055 . - . ID=gene-SNF32_04615;Name=SNF32_04615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04615;pseudo=true JAXGFV010000006.1 Protein Homology CDS 19149 20055 . - 0 ID=cds-SNF32_04615;Parent=gene-SNF32_04615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008380365.1;locus_tag=SNF32_04615;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 20301 21540 . + . ID=gene-SNF32_04620;Name=SNF32_04620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04620;pseudo=true JAXGFV010000006.1 Protein Homology CDS 20301 21540 . + 0 ID=cds-SNF32_04620;Parent=gene-SNF32_04620;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016609466.1;locus_tag=SNF32_04620;product=extracellular solute-binding protein;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 21688 22558 . + . ID=gene-SNF32_04625;Name=SNF32_04625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04625;pseudo=true JAXGFV010000006.1 Protein Homology CDS 21688 22558 . + 0 ID=cds-SNF32_04625;Parent=gene-SNF32_04625;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003128229.1;locus_tag=SNF32_04625;product=sugar ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 22581 23412 . + . ID=gene-SNF32_04630;Name=SNF32_04630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04630;pseudo=true JAXGFV010000006.1 Protein Homology CDS 22581 23412 . + 0 ID=cds-SNF32_04630;Parent=gene-SNF32_04630;Note=frameshifted;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734614.1;locus_tag=SNF32_04630;product=carbohydrate ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 23431 25221 . + . ID=gene-SNF32_04635;Name=SNF32_04635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04635;pseudo=true JAXGFV010000006.1 Protein Homology CDS 23431 25221 . + 0 ID=cds-SNF32_04635;Parent=gene-SNF32_04635;Note=frameshifted;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016612865.1;locus_tag=SNF32_04635;product=glycoside hydrolase family 2 TIM barrel-domain containing protein;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank gene 25252 25560 . + . ID=gene-SNF32_04640;Name=SNF32_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04640 JAXGFV010000006.1 GeneMarkS-2+ CDS 25252 25560 . + 0 ID=cds-MDY4306922.1;Parent=gene-SNF32_04640;Dbxref=NCBI_GP:MDY4306922.1;Name=MDY4306922.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04640;product=hypothetical protein;protein_id=MDY4306922.1;transl_table=11 JAXGFV010000006.1 Genbank gene 25575 26123 . + . ID=gene-SNF32_04645;Name=SNF32_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04645 JAXGFV010000006.1 Protein Homology CDS 25575 26123 . + 0 ID=cds-MDY4306923.1;Parent=gene-SNF32_04645;Dbxref=NCBI_GP:MDY4306923.1;Name=MDY4306923.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF016497.3;locus_tag=SNF32_04645;product=family 43 glycosylhydrolase;protein_id=MDY4306923.1;transl_table=11 JAXGFV010000006.1 Genbank gene 26063 26650 . + . ID=gene-SNF32_04650;Name=SNF32_04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04650 JAXGFV010000006.1 Protein Homology CDS 26063 26650 . + 0 ID=cds-MDY4306924.1;Parent=gene-SNF32_04650;Dbxref=NCBI_GP:MDY4306924.1;Name=MDY4306924.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016497.3;locus_tag=SNF32_04650;product=hypothetical protein;protein_id=MDY4306924.1;transl_table=11 JAXGFV010000006.1 Genbank gene 27336 27761 . + . ID=gene-SNF32_04655;Name=SNF32_04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04655 JAXGFV010000006.1 GeneMarkS-2+ CDS 27336 27761 . + 0 ID=cds-MDY4306925.1;Parent=gene-SNF32_04655;Dbxref=NCBI_GP:MDY4306925.1;Name=MDY4306925.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04655;product=hypothetical protein;protein_id=MDY4306925.1;transl_table=11 JAXGFV010000006.1 Genbank gene 27758 28105 . + . ID=gene-SNF32_04660;Name=SNF32_04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04660 JAXGFV010000006.1 GeneMarkS-2+ CDS 27758 28105 . + 0 ID=cds-MDY4306926.1;Parent=gene-SNF32_04660;Dbxref=NCBI_GP:MDY4306926.1;Name=MDY4306926.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04660;product=hypothetical protein;protein_id=MDY4306926.1;transl_table=11 JAXGFV010000006.1 Genbank gene 28964 29197 . + . ID=gene-SNF32_04665;Name=SNF32_04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04665 JAXGFV010000006.1 GeneMarkS-2+ CDS 28964 29197 . + 0 ID=cds-MDY4306927.1;Parent=gene-SNF32_04665;Dbxref=NCBI_GP:MDY4306927.1;Name=MDY4306927.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04665;product=hypothetical protein;protein_id=MDY4306927.1;transl_table=11 JAXGFV010000006.1 Genbank gene 29362 30045 . + . ID=gene-SNF32_04670;Name=SNF32_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04670 JAXGFV010000006.1 Protein Homology CDS 29362 30045 . + 0 ID=cds-MDY4306928.1;Parent=gene-SNF32_04670;Dbxref=NCBI_GP:MDY4306928.1;Name=MDY4306928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734619.1;locus_tag=SNF32_04670;product=LysM peptidoglycan-binding domain-containing protein;protein_id=MDY4306928.1;transl_table=11 JAXGFV010000006.1 Genbank gene 30056 30304 . + . ID=gene-SNF32_04675;Name=SNF32_04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04675 JAXGFV010000006.1 Protein Homology CDS 30056 30304 . + 0 ID=cds-MDY4306929.1;Parent=gene-SNF32_04675;Dbxref=NCBI_GP:MDY4306929.1;Name=MDY4306929.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016961.3;locus_tag=SNF32_04675;product=phage holin family protein;protein_id=MDY4306929.1;transl_table=11 JAXGFV010000006.1 Genbank gene 30304 30450 . + . ID=gene-SNF32_04680;Name=SNF32_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04680 JAXGFV010000006.1 Protein Homology CDS 30304 30450 . + 0 ID=cds-MDY4306930.1;Parent=gene-SNF32_04680;Dbxref=NCBI_GP:MDY4306930.1;Name=MDY4306930.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016961.3;locus_tag=SNF32_04680;product=hypothetical protein;protein_id=MDY4306930.1;transl_table=11 JAXGFV010000006.1 Genbank gene 30587 30904 . + . ID=gene-SNF32_04685;Name=SNF32_04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04685 JAXGFV010000006.1 GeneMarkS-2+ CDS 30587 30904 . + 0 ID=cds-MDY4306931.1;Parent=gene-SNF32_04685;Dbxref=NCBI_GP:MDY4306931.1;Name=MDY4306931.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04685;product=hypothetical protein;protein_id=MDY4306931.1;transl_table=11 JAXGFV010000006.1 Genbank gene 31233 33473 . + . ID=gene-SNF32_04690;Name=SNF32_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04690 JAXGFV010000006.1 Protein Homology CDS 31233 33473 . + 0 ID=cds-MDY4306932.1;Parent=gene-SNF32_04690;Dbxref=NCBI_GP:MDY4306932.1;Name=MDY4306932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723837.1;locus_tag=SNF32_04690;product=DUF1906 domain-containing protein;protein_id=MDY4306932.1;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 35096 36047 . - . ID=gene-SNF32_04695;Name=SNF32_04695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04695;pseudo=true JAXGFV010000006.1 Protein Homology CDS 35096 36047 . - 0 ID=cds-SNF32_04695;Parent=gene-SNF32_04695;Note=frameshifted;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734625.1;locus_tag=SNF32_04695;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank gene 36242 36706 . + . ID=gene-SNF32_04700;Name=SNF32_04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04700 JAXGFV010000006.1 Protein Homology CDS 36242 36706 . + 0 ID=cds-MDY4306933.1;Parent=gene-SNF32_04700;Dbxref=NCBI_GP:MDY4306933.1;Name=MDY4306933.1;Ontology_term=GO:0006281,GO:0003908;gbkey=CDS;go_function=methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002337876.1;locus_tag=SNF32_04700;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=MDY4306933.1;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 36794 37833 . - . ID=gene-SNF32_04705;Name=SNF32_04705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04705;pseudo=true JAXGFV010000006.1 Protein Homology CDS 36794 37833 . - 0 ID=cds-SNF32_04705;Parent=gene-SNF32_04705;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002375726.1;locus_tag=SNF32_04705;product=putative sulfate exporter family transporter;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 37956 38923 . - . ID=gene-SNF32_04710;Name=SNF32_04710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04710;pseudo=true JAXGFV010000006.1 Protein Homology CDS 37956 38923 . - 0 ID=cds-SNF32_04710;Parent=gene-SNF32_04710;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734628.1;locus_tag=SNF32_04710;product=TDT family transporter;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 39211 40031 . + . ID=gene-SNF32_04715;Name=SNF32_04715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04715;pseudo=true JAXGFV010000006.1 Protein Homology CDS 39211 40031 . + 0 ID=cds-SNF32_04715;Parent=gene-SNF32_04715;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734629.1;locus_tag=SNF32_04715;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 40212 41384 . + . ID=gene-SNF32_04720;Name=SNF32_04720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04720;pseudo=true JAXGFV010000006.1 Protein Homology CDS 40212 41384 . + 0 ID=cds-SNF32_04720;Parent=gene-SNF32_04720;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009252,GO:0051301;gbkey=CDS;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014834260.1;locus_tag=SNF32_04720;product=FtsW/RodA/SpoVE family cell cycle protein;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 41411 41766 . + . ID=gene-SNF32_04725;Name=SNF32_04725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04725;pseudo=true JAXGFV010000006.1 Protein Homology CDS 41411 41766 . + 0 ID=cds-SNF32_04725;Parent=gene-SNF32_04725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734631.1;locus_tag=SNF32_04725;product=arsenate reductase family protein;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 41768 42105 . + . ID=gene-SNF32_04730;Name=SNF32_04730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04730;pseudo=true JAXGFV010000006.1 Protein Homology CDS 41768 42105 . + 0 ID=cds-SNF32_04730;Parent=gene-SNF32_04730;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002375559.1;locus_tag=SNF32_04730;product=glycine cleavage system protein H;pseudo=true;transl_table=11 JAXGFV010000006.1 cmsearch binding_site 42173 42422 . + . ID=id-JAXGFV010000006.1:42173..42422;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.4 JAXGFV010000006.1 Genbank gene 42489 43520 . + . ID=gene-SNF32_04735;Name=SNF32_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04735 JAXGFV010000006.1 Protein Homology CDS 42489 43520 . + 0 ID=cds-MDY4306934.1;Parent=gene-SNF32_04735;Dbxref=NCBI_GP:MDY4306934.1;Name=MDY4306934.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010738389.1;locus_tag=SNF32_04735;product=methionine ABC transporter ATP-binding protein;protein_id=MDY4306934.1;transl_table=11 JAXGFV010000006.1 Genbank gene 43513 44199 . + . ID=gene-SNF32_04740;Name=SNF32_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04740 JAXGFV010000006.1 Protein Homology CDS 43513 44199 . + 0 ID=cds-MDY4306935.1;Parent=gene-SNF32_04740;Dbxref=NCBI_GP:MDY4306935.1;Name=MDY4306935.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016623210.1;locus_tag=SNF32_04740;product=methionine ABC transporter permease;protein_id=MDY4306935.1;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 44223 45072 . + . ID=gene-SNF32_04745;Name=SNF32_04745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04745;pseudo=true JAXGFV010000006.1 Protein Homology CDS 44223 45072 . + 0 ID=cds-SNF32_04745;Parent=gene-SNF32_04745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287678.1;locus_tag=SNF32_04745;product=MetQ/NlpA family ABC transporter substrate-binding protein;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank gene 45247 46056 . + . ID=gene-SNF32_04750;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=SNF32_04750 JAXGFV010000006.1 Protein Homology CDS 45247 46056 . + 0 ID=cds-MDY4306936.1;Parent=gene-SNF32_04750;Dbxref=NCBI_GP:MDY4306936.1;Name=MDY4306936.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005879209.1;locus_tag=SNF32_04750;product=Fe-S cluster assembly ATPase SufC;protein_id=MDY4306936.1;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 46071 47359 . + . ID=gene-SNF32_04755;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=pseudogene;locus_tag=SNF32_04755;pseudo=true JAXGFV010000006.1 Protein Homology CDS 46071 47359 . + 0 ID=cds-SNF32_04755;Parent=gene-SNF32_04755;Note=frameshifted;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufD;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010751694.1;locus_tag=SNF32_04755;product=Fe-S cluster assembly protein SufD;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 47356 48590 . + . ID=gene-SNF32_04760;Name=SNF32_04760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04760;pseudo=true JAXGFV010000006.1 Protein Homology CDS 47356 48590 . + 0 ID=cds-SNF32_04760;Parent=gene-SNF32_04760;Note=frameshifted;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016632038.1;locus_tag=SNF32_04760;product=cysteine desulfurase;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank gene 48577 49047 . + . ID=gene-SNF32_04765;Name=SNF32_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04765 JAXGFV010000006.1 Protein Homology CDS 48577 49047 . + 0 ID=cds-MDY4306937.1;Parent=gene-SNF32_04765;Dbxref=NCBI_GP:MDY4306937.1;Name=MDY4306937.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016632039.1;locus_tag=SNF32_04765;product=SUF system NifU family Fe-S cluster assembly protein;protein_id=MDY4306937.1;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 49052 50441 . + . ID=gene-SNF32_04770;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=pseudogene;locus_tag=SNF32_04770;pseudo=true JAXGFV010000006.1 Protein Homology CDS 49052 50441 . + 0 ID=cds-SNF32_04770;Parent=gene-SNF32_04770;Note=frameshifted;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufB;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016623216.1;locus_tag=SNF32_04770;product=Fe-S cluster assembly protein SufB;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 50535 51674 . - . ID=gene-SNF32_04775;Name=SNF32_04775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04775;pseudo=true JAXGFV010000006.1 Protein Homology CDS 50535 51674 . - 0 ID=cds-SNF32_04775;Parent=gene-SNF32_04775;Note=frameshifted;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002301919.1;locus_tag=SNF32_04775;product=site-specific integrase;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 51713 52442 . - . ID=gene-SNF32_04780;Name=SNF32_04780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04780;pseudo=true JAXGFV010000006.1 Protein Homology CDS 51713 52442 . - 0 ID=cds-SNF32_04780;Parent=gene-SNF32_04780;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002301918.1;locus_tag=SNF32_04780;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 52674 52948 . + . ID=gene-SNF32_04785;Name=SNF32_04785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04785;pseudo=true JAXGFV010000006.1 Protein Homology CDS 52674 52948 . + 0 ID=cds-SNF32_04785;Parent=gene-SNF32_04785;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010738381.1;locus_tag=SNF32_04785;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 53046 55045 . + . ID=gene-SNF32_04790;Name=SNF32_04790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04790;pseudo=true JAXGFV010000006.1 Protein Homology CDS 53046 55045 . + 0 ID=cds-SNF32_04790;Parent=gene-SNF32_04790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002331149.1;locus_tag=SNF32_04790;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank gene 55119 55454 . - . ID=gene-SNF32_04795;Name=SNF32_04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04795 JAXGFV010000006.1 Protein Homology CDS 55119 55454 . - 0 ID=cds-MDY4306938.1;Parent=gene-SNF32_04795;Dbxref=NCBI_GP:MDY4306938.1;Name=MDY4306938.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328543.1;locus_tag=SNF32_04795;product=helix-turn-helix transcriptional regulator;protein_id=MDY4306938.1;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 55548 55795 . + . ID=gene-SNF32_04800;Name=SNF32_04800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04800;pseudo=true JAXGFV010000006.1 Protein Homology CDS 55548 55795 . + 0 ID=cds-SNF32_04800;Parent=gene-SNF32_04800;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002324259.1;locus_tag=SNF32_04800;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 55832 56193 . + . ID=gene-SNF32_04805;Name=SNF32_04805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04805;pseudo=true JAXGFV010000006.1 Protein Homology CDS 55832 56193 . + 0 ID=cds-SNF32_04805;Parent=gene-SNF32_04805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010717431.1;locus_tag=SNF32_04805;product=zinc ribbon domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 56239 56564 . + . ID=gene-SNF32_04810;Name=SNF32_04810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04810;pseudo=true JAXGFV010000006.1 Protein Homology CDS 56239 56564 . + 0 ID=cds-SNF32_04810;Parent=gene-SNF32_04810;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002334408.1;locus_tag=SNF32_04810;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 56833 57440 . + . ID=gene-SNF32_04815;Name=SNF32_04815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04815;pseudo=true JAXGFV010000006.1 Protein Homology CDS 56833 57440 . + 0 ID=cds-SNF32_04815;Parent=gene-SNF32_04815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016180794.1;locus_tag=SNF32_04815;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 57835 58990 . + . ID=gene-SNF32_04820;Name=SNF32_04820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04820;pseudo=true JAXGFV010000006.1 Protein Homology CDS 57835 58990 . + 0 ID=cds-SNF32_04820;Parent=gene-SNF32_04820;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611768.1;locus_tag=SNF32_04820;product=IS3 family transposase;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank gene 59300 59728 . + . ID=gene-SNF32_04825;Name=SNF32_04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04825 JAXGFV010000006.1 Protein Homology CDS 59300 59728 . + 0 ID=cds-MDY4306939.1;Parent=gene-SNF32_04825;Dbxref=NCBI_GP:MDY4306939.1;Name=MDY4306939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010749158.1;locus_tag=SNF32_04825;product=type I restriction-modification system subunit M N-terminal domain-containing protein;protein_id=MDY4306939.1;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 59815 60892 . + . ID=gene-SNF32_04830;Name=SNF32_04830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04830;pseudo=true JAXGFV010000006.1 Protein Homology CDS 59815 60892 . + 0 ID=cds-SNF32_04830;Parent=gene-SNF32_04830;Note=frameshifted;Ontology_term=GO:0006306,GO:0009307,GO:0009007,GO:0015666;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA methylation|0006306||IEA,DNA restriction-modification system|0009307||IEA;inference=COORDINATES: protein motif:HMM:NF014442.3;locus_tag=SNF32_04830;product=type I restriction-modification system subunit M;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 60932 62030 . + . ID=gene-SNF32_04835;Name=SNF32_04835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04835;pseudo=true JAXGFV010000006.1 Protein Homology CDS 60932 62030 . + 0 ID=cds-SNF32_04835;Parent=gene-SNF32_04835;Note=frameshifted%3B internal stop;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002323103.1;locus_tag=SNF32_04835;product=restriction endonuclease subunit S;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 62043 65187 . + . ID=gene-SNF32_04840;Name=SNF32_04840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04840;pseudo=true JAXGFV010000006.1 Protein Homology CDS 62043 65187 . + 0 ID=cds-SNF32_04840;Parent=gene-SNF32_04840;Note=frameshifted;Ontology_term=GO:0009307,GO:0009035,GO:0019812;gbkey=CDS;go_component=type I site-specific deoxyribonuclease complex|0019812||IEA;go_function=type I site-specific deoxyribonuclease activity|0009035||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002334404.1;locus_tag=SNF32_04840;product=HsdR family type I site-specific deoxyribonuclease;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank gene 67230 67472 . + . ID=gene-SNF32_04845;Name=SNF32_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04845 JAXGFV010000006.1 GeneMarkS-2+ CDS 67230 67472 . + 0 ID=cds-MDY4306940.1;Parent=gene-SNF32_04845;Dbxref=NCBI_GP:MDY4306940.1;Name=MDY4306940.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04845;product=hypothetical protein;protein_id=MDY4306940.1;transl_table=11 JAXGFV010000006.1 Genbank gene 67463 67732 . + . ID=gene-SNF32_04850;Name=SNF32_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04850 JAXGFV010000006.1 GeneMarkS-2+ CDS 67463 67732 . + 0 ID=cds-MDY4306941.1;Parent=gene-SNF32_04850;Dbxref=NCBI_GP:MDY4306941.1;Name=MDY4306941.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04850;product=hypothetical protein;protein_id=MDY4306941.1;transl_table=11 JAXGFV010000006.1 Genbank gene 67732 68172 . + . ID=gene-SNF32_04855;Name=SNF32_04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04855 JAXGFV010000006.1 GeneMarkS-2+ CDS 67732 68172 . + 0 ID=cds-MDY4306942.1;Parent=gene-SNF32_04855;Dbxref=NCBI_GP:MDY4306942.1;Name=MDY4306942.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04855;product=hypothetical protein;protein_id=MDY4306942.1;transl_table=11 JAXGFV010000006.1 Genbank gene 68136 68666 . + . ID=gene-SNF32_04860;Name=SNF32_04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04860 JAXGFV010000006.1 GeneMarkS-2+ CDS 68136 68666 . + 0 ID=cds-MDY4306943.1;Parent=gene-SNF32_04860;Dbxref=NCBI_GP:MDY4306943.1;Name=MDY4306943.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04860;product=hypothetical protein;protein_id=MDY4306943.1;transl_table=11 JAXGFV010000006.1 Genbank gene 69441 69587 . + . ID=gene-SNF32_04865;Name=SNF32_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04865 JAXGFV010000006.1 GeneMarkS-2+ CDS 69441 69587 . + 0 ID=cds-MDY4306944.1;Parent=gene-SNF32_04865;Dbxref=NCBI_GP:MDY4306944.1;Name=MDY4306944.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04865;product=hypothetical protein;protein_id=MDY4306944.1;transl_table=11 JAXGFV010000006.1 Genbank gene 69634 69786 . + . ID=gene-SNF32_04870;Name=SNF32_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04870 JAXGFV010000006.1 GeneMarkS-2+ CDS 69634 69786 . + 0 ID=cds-MDY4306945.1;Parent=gene-SNF32_04870;Dbxref=NCBI_GP:MDY4306945.1;Name=MDY4306945.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04870;product=hypothetical protein;protein_id=MDY4306945.1;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 70190 70808 . + . ID=gene-SNF32_04875;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=pseudogene;locus_tag=SNF32_04875;pseudo=true JAXGFV010000006.1 Protein Homology CDS 70190 70808 . + 0 ID=cds-SNF32_04875;Parent=gene-SNF32_04875;Note=frameshifted;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723441.1;locus_tag=SNF32_04875;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 71005 71124 . + . ID=gene-SNF32_04880;Name=SNF32_04880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04880;pseudo=true JAXGFV010000006.1 Protein Homology CDS 71005 71124 . + 0 ID=cds-SNF32_04880;Parent=gene-SNF32_04880;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010821044.1;locus_tag=SNF32_04880;product=family 1 glycosylhydrolase;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank gene 71240 71374 . + . ID=gene-SNF32_04885;Name=SNF32_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04885 JAXGFV010000006.1 GeneMarkS-2+ CDS 71240 71374 . + 0 ID=cds-MDY4306946.1;Parent=gene-SNF32_04885;Dbxref=NCBI_GP:MDY4306946.1;Name=MDY4306946.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04885;product=hypothetical protein;protein_id=MDY4306946.1;transl_table=11 JAXGFV010000006.1 Genbank gene 71322 71735 . - . ID=gene-SNF32_04890;Name=SNF32_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04890 JAXGFV010000006.1 Protein Homology CDS 71322 71735 . - 0 ID=cds-MDY4306947.1;Parent=gene-SNF32_04890;Dbxref=NCBI_GP:MDY4306947.1;Name=MDY4306947.1;Ontology_term=GO:0046677,GO:0071555,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_process=response to antibiotic|0046677||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: protein motif:HMM:NF016763.3;locus_tag=SNF32_04890;product=VanZ family protein;protein_id=MDY4306947.1;transl_table=11 JAXGFV010000006.1 cmsearch riboswitch 72523 72695 . + . ID=id-JAXGFV010000006.1:72523..72695;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch JAXGFV010000006.1 Genbank pseudogene 72912 73847 . + . ID=gene-SNF32_04895;Name=SNF32_04895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04895;pseudo=true JAXGFV010000006.1 Protein Homology CDS 72912 73847 . + 0 ID=cds-SNF32_04895;Parent=gene-SNF32_04895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723436.1;locus_tag=SNF32_04895;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 73840 74836 . + . ID=gene-SNF32_04900;Name=SNF32_04900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04900;pseudo=true JAXGFV010000006.1 Protein Homology CDS 73840 74836 . + 0 ID=cds-SNF32_04900;Parent=gene-SNF32_04900;Note=frameshifted;Ontology_term=GO:0006826,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014525014.1;locus_tag=SNF32_04900;product=iron ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank gene 74850 75062 . + . ID=gene-SNF32_04905;Name=SNF32_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04905 JAXGFV010000006.1 GeneMarkS-2+ CDS 74850 75062 . + 0 ID=cds-MDY4306948.1;Parent=gene-SNF32_04905;Dbxref=NCBI_GP:MDY4306948.1;Name=MDY4306948.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04905;product=hypothetical protein;protein_id=MDY4306948.1;transl_table=11 JAXGFV010000006.1 Genbank gene 75059 75268 . + . ID=gene-SNF32_04910;Name=SNF32_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04910 JAXGFV010000006.1 Protein Homology CDS 75059 75268 . + 0 ID=cds-MDY4306949.1;Parent=gene-SNF32_04910;Dbxref=NCBI_GP:MDY4306949.1;Name=MDY4306949.1;Ontology_term=GO:0009235,GO:0005524,GO:0008817,GO:0031419;gbkey=CDS;go_function=ATP binding|0005524||IEA,corrinoid adenosyltransferase activity|0008817||IEA,cobalamin binding|0031419||IEA;go_process=cobalamin metabolic process|0009235||IEA;inference=COORDINATES: protein motif:HMM:NF014033.3;locus_tag=SNF32_04910;product=ATP:cob(I)alamin adenosyltransferase;protein_id=MDY4306949.1;transl_table=11 JAXGFV010000006.1 Genbank gene 75386 76162 . + . ID=gene-SNF32_04915;Name=SNF32_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04915 JAXGFV010000006.1 Protein Homology CDS 75386 76162 . + 0 ID=cds-MDY4306950.1;Parent=gene-SNF32_04915;Dbxref=NCBI_GP:MDY4306950.1;Name=MDY4306950.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723433.1;locus_tag=SNF32_04915;product=ABC transporter ATP-binding protein;protein_id=MDY4306950.1;transl_table=11 JAXGFV010000006.1 Genbank gene 76436 76573 . + . ID=gene-SNF32_04920;Name=SNF32_04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04920 JAXGFV010000006.1 GeneMarkS-2+ CDS 76436 76573 . + 0 ID=cds-MDY4306951.1;Parent=gene-SNF32_04920;Dbxref=NCBI_GP:MDY4306951.1;Name=MDY4306951.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04920;product=hypothetical protein;protein_id=MDY4306951.1;transl_table=11 JAXGFV010000006.1 Genbank gene 77071 77223 . + . ID=gene-SNF32_04925;Name=SNF32_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04925 JAXGFV010000006.1 GeneMarkS-2+ CDS 77071 77223 . + 0 ID=cds-MDY4306952.1;Parent=gene-SNF32_04925;Dbxref=NCBI_GP:MDY4306952.1;Name=MDY4306952.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04925;product=hypothetical protein;protein_id=MDY4306952.1;transl_table=11 JAXGFV010000006.1 Genbank gene 77479 77916 . + . ID=gene-SNF32_04930;Name=SNF32_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04930 JAXGFV010000006.1 Protein Homology CDS 77479 77916 . + 0 ID=cds-MDY4306953.1;Parent=gene-SNF32_04930;Dbxref=NCBI_GP:MDY4306953.1;Name=MDY4306953.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012789.3;locus_tag=SNF32_04930;product=UvrD-helicase domain-containing protein;protein_id=MDY4306953.1;transl_table=11 JAXGFV010000006.1 Genbank gene 78177 78467 . + . ID=gene-SNF32_04935;Name=SNF32_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04935 JAXGFV010000006.1 Protein Homology CDS 78177 78467 . + 0 ID=cds-MDY4306954.1;Parent=gene-SNF32_04935;Dbxref=NCBI_GP:MDY4306954.1;Name=MDY4306954.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF024754.3;locus_tag=SNF32_04935;product=3'-5' exonuclease;protein_id=MDY4306954.1;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 78776 79132 . + . ID=gene-SNF32_04940;Name=SNF32_04940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04940;pseudo=true JAXGFV010000006.1 Protein Homology CDS 78776 79132 . + 0 ID=cds-SNF32_04940;Parent=gene-SNF32_04940;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025840.3;locus_tag=SNF32_04940;product=DarT ssDNA thymidine ADP-ribosyltransferase family protein;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank gene 79208 79651 . + . ID=gene-SNF32_04945;Name=SNF32_04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04945 JAXGFV010000006.1 Protein Homology CDS 79208 79651 . + 0 ID=cds-MDY4306955.1;Parent=gene-SNF32_04945;Dbxref=NCBI_GP:MDY4306955.1;Name=MDY4306955.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015692.3;locus_tag=SNF32_04945;product=ADP-ribosylglycohydrolase family protein;protein_id=MDY4306955.1;transl_table=11 JAXGFV010000006.1 Genbank gene 79620 80111 . + . ID=gene-SNF32_04950;Name=SNF32_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04950 JAXGFV010000006.1 GeneMarkS-2+ CDS 79620 80111 . + 0 ID=cds-MDY4306956.1;Parent=gene-SNF32_04950;Dbxref=NCBI_GP:MDY4306956.1;Name=MDY4306956.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04950;product=hypothetical protein;protein_id=MDY4306956.1;transl_table=11 JAXGFV010000006.1 Genbank gene 80150 80704 . + . ID=gene-SNF32_04955;Name=SNF32_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04955 JAXGFV010000006.1 GeneMarkS-2+ CDS 80150 80704 . + 0 ID=cds-MDY4306957.1;Parent=gene-SNF32_04955;Dbxref=NCBI_GP:MDY4306957.1;Name=MDY4306957.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04955;product=hypothetical protein;protein_id=MDY4306957.1;transl_table=11 JAXGFV010000006.1 Genbank gene 80731 80898 . + . ID=gene-SNF32_04960;Name=SNF32_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04960 JAXGFV010000006.1 GeneMarkS-2+ CDS 80731 80898 . + 0 ID=cds-MDY4306958.1;Parent=gene-SNF32_04960;Dbxref=NCBI_GP:MDY4306958.1;Name=MDY4306958.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_04960;product=hypothetical protein;protein_id=MDY4306958.1;transl_table=11 JAXGFV010000006.1 Genbank gene 81510 82982 . + . ID=gene-SNF32_04965;Name=SNF32_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04965 JAXGFV010000006.1 Protein Homology CDS 81510 82982 . + 0 ID=cds-MDY4306959.1;Parent=gene-SNF32_04965;Dbxref=NCBI_GP:MDY4306959.1;Name=MDY4306959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734662.1;locus_tag=SNF32_04965;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=MDY4306959.1;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 83268 83471 . + . ID=gene-SNF32_04970;Name=SNF32_04970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04970;pseudo=true JAXGFV010000006.1 Protein Homology CDS 83268 83471 . + 0 ID=cds-SNF32_04970;Parent=gene-SNF32_04970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009755131.1;locus_tag=SNF32_04970;product=haloacid dehalogenase-like hydrolase;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 83874 84256 . + . ID=gene-SNF32_04975;Name=eutP;gbkey=Gene;gene=eutP;gene_biotype=pseudogene;locus_tag=SNF32_04975;pseudo=true JAXGFV010000006.1 Protein Homology CDS 83874 84256 . + 0 ID=cds-SNF32_04975;Parent=gene-SNF32_04975;Note=frameshifted;Ontology_term=GO:0046336;gbkey=CDS;gene=eutP;go_process=ethanolamine catabolic process|0046336||IEA;inference=COORDINATES: protein motif:HMM:NF022128.3;locus_tag=SNF32_04975;product=EutP/PduV family microcompartment system protein;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank gene 84288 84869 . + . ID=gene-SNF32_04980;Name=SNF32_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04980 JAXGFV010000006.1 Protein Homology CDS 84288 84869 . + 0 ID=cds-MDY4306960.1;Parent=gene-SNF32_04980;Dbxref=NCBI_GP:MDY4306960.1;Name=MDY4306960.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002382343.1;locus_tag=SNF32_04980;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=MDY4306960.1;transl_table=11 JAXGFV010000006.1 cmsearch riboswitch 84917 85066 . + . ID=id-JAXGFV010000006.1:84917..85066;Dbxref=RFAM:RF01482;Note=The adenosylcobalamin (AdoCbl) riboswitch is found in the 5'-untranslated regions of vitamin B12 (Cobalamin) related genes in bacteria;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch JAXGFV010000006.1 Genbank gene 85353 86462 . + . ID=gene-SNF32_04985;Name=SNF32_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04985 JAXGFV010000006.1 Protein Homology CDS 85353 86462 . + 0 ID=cds-MDY4306961.1;Parent=gene-SNF32_04985;Dbxref=NCBI_GP:MDY4306961.1;Name=MDY4306961.1;Ontology_term=GO:0051144,GO:0004022,GO:0005506,GO:0030554;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,iron ion binding|0005506||IEA,adenyl nucleotide binding|0030554||IEA;go_process=propanediol catabolic process|0051144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002345865.1;locus_tag=SNF32_04985;product=1-propanol dehydrogenase PduQ;protein_id=MDY4306961.1;transl_table=11 JAXGFV010000006.1 Genbank gene 86635 86982 . + . ID=gene-SNF32_04990;Name=SNF32_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_04990 JAXGFV010000006.1 Protein Homology CDS 86635 86982 . + 0 ID=cds-MDY4306962.1;Parent=gene-SNF32_04990;Dbxref=NCBI_GP:MDY4306962.1;Name=MDY4306962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002345864.1;locus_tag=SNF32_04990;product=BMC domain-containing protein;protein_id=MDY4306962.1;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 87009 87580 . + . ID=gene-SNF32_04995;Name=SNF32_04995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_04995;pseudo=true JAXGFV010000006.1 Protein Homology CDS 87009 87580 . + 0 ID=cds-SNF32_04995;Parent=gene-SNF32_04995;Note=frameshifted;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016630415.1;locus_tag=SNF32_04995;product=response regulator;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 87580 89006 . + . ID=gene-SNF32_05000;Name=SNF32_05000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05000;pseudo=true JAXGFV010000006.1 Protein Homology CDS 87580 89006 . + 0 ID=cds-SNF32_05000;Parent=gene-SNF32_05000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734668.1;locus_tag=SNF32_05000;product=sensor histidine kinase;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank gene 89088 90512 . + . ID=gene-SNF32_05005;Name=eutA;gbkey=Gene;gene=eutA;gene_biotype=protein_coding;locus_tag=SNF32_05005 JAXGFV010000006.1 Protein Homology CDS 89088 90512 . + 0 ID=cds-MDY4306963.1;Parent=gene-SNF32_05005;Dbxref=NCBI_GP:MDY4306963.1;Name=MDY4306963.1;gbkey=CDS;gene=eutA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010708699.1;locus_tag=SNF32_05005;product=ethanolamine ammonia-lyase reactivating factor EutA;protein_id=MDY4306963.1;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 90529 91891 . + . ID=gene-SNF32_05010;Name=SNF32_05010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05010;pseudo=true JAXGFV010000006.1 Protein Homology CDS 90529 91891 . + 0 ID=cds-SNF32_05010;Parent=gene-SNF32_05010;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002380321.1;locus_tag=SNF32_05010;product=ethanolamine ammonia-lyase subunit EutB;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 91909 92813 . + . ID=gene-SNF32_05015;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=pseudogene;locus_tag=SNF32_05015;pseudo=true JAXGFV010000006.1 Protein Homology CDS 91909 92813 . + 0 ID=cds-SNF32_05015;Parent=gene-SNF32_05015;Note=frameshifted;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002381882.1;locus_tag=SNF32_05015;product=ethanolamine ammonia-lyase subunit EutC;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank gene 92828 93481 . + . ID=gene-SNF32_05020;Name=eutL;gbkey=Gene;gene=eutL;gene_biotype=protein_coding;locus_tag=SNF32_05020 JAXGFV010000006.1 Protein Homology CDS 92828 93481 . + 0 ID=cds-MDY4306964.1;Parent=gene-SNF32_05020;Dbxref=NCBI_GP:MDY4306964.1;Name=MDY4306964.1;Ontology_term=GO:0005198,GO:0031469;gbkey=CDS;gene=eutL;go_component=bacterial microcompartment|0031469||IEA;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002392145.1;locus_tag=SNF32_05020;product=ethanolamine utilization microcompartment protein EutL;protein_id=MDY4306964.1;transl_table=11 JAXGFV010000006.1 Genbank gene 93495 93998 . + . ID=gene-SNF32_05025;Name=SNF32_05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05025 JAXGFV010000006.1 Protein Homology CDS 93495 93998 . + 0 ID=cds-MDY4306965.1;Parent=gene-SNF32_05025;Dbxref=NCBI_GP:MDY4306965.1;Name=MDY4306965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734673.1;locus_tag=SNF32_05025;product=BMC domain-containing protein;protein_id=MDY4306965.1;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 93988 95461 . + . ID=gene-SNF32_05030;Name=SNF32_05030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05030;pseudo=true JAXGFV010000006.1 Protein Homology CDS 93988 95461 . + 0 ID=cds-SNF32_05030;Parent=gene-SNF32_05030;Note=frameshifted;Ontology_term=GO:0016620;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002929460.1;locus_tag=SNF32_05030;product=acetaldehyde dehydrogenase (acetylating);pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank gene 95510 95794 . + . ID=gene-SNF32_05035;Name=SNF32_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05035 JAXGFV010000006.1 Protein Homology CDS 95510 95794 . + 0 ID=cds-MDY4306966.1;Parent=gene-SNF32_05035;Dbxref=NCBI_GP:MDY4306966.1;Name=MDY4306966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016180229.1;locus_tag=SNF32_05035;product=BMC domain-containing protein;protein_id=MDY4306966.1;transl_table=11 JAXGFV010000006.1 Genbank gene 96042 96296 . + . ID=gene-SNF32_05040;Name=SNF32_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05040 JAXGFV010000006.1 GeneMarkS-2+ CDS 96042 96296 . + 0 ID=cds-MDY4306967.1;Parent=gene-SNF32_05040;Dbxref=NCBI_GP:MDY4306967.1;Name=MDY4306967.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05040;product=hypothetical protein;protein_id=MDY4306967.1;transl_table=11 JAXGFV010000006.1 Genbank gene 96476 96616 . + . ID=gene-SNF32_05045;Name=SNF32_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05045 JAXGFV010000006.1 GeneMarkS-2+ CDS 96476 96616 . + 0 ID=cds-MDY4306968.1;Parent=gene-SNF32_05045;Dbxref=NCBI_GP:MDY4306968.1;Name=MDY4306968.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05045;product=hypothetical protein;protein_id=MDY4306968.1;transl_table=11 JAXGFV010000006.1 Genbank gene 96620 97252 . + . ID=gene-SNF32_05050;Name=eutD;gbkey=Gene;gene=eutD;gene_biotype=protein_coding;locus_tag=SNF32_05050 JAXGFV010000006.1 Protein Homology CDS 96620 97252 . + 0 ID=cds-MDY4306969.1;Parent=gene-SNF32_05050;Dbxref=NCBI_GP:MDY4306969.1;Name=MDY4306969.1;gbkey=CDS;gene=eutD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002366719.1;locus_tag=SNF32_05050;product=ethanolamine utilization phosphate acetyltransferase EutD;protein_id=MDY4306969.1;transl_table=11 JAXGFV010000006.1 Genbank gene 97265 97582 . + . ID=gene-SNF32_05055;Name=SNF32_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05055 JAXGFV010000006.1 GeneMarkS-2+ CDS 97265 97582 . + 0 ID=cds-MDY4306970.1;Parent=gene-SNF32_05055;Dbxref=NCBI_GP:MDY4306970.1;Name=MDY4306970.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05055;product=hypothetical protein;protein_id=MDY4306970.1;transl_table=11 JAXGFV010000006.1 Genbank gene 97706 97870 . + . ID=gene-SNF32_05060;Name=SNF32_05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05060 JAXGFV010000006.1 GeneMarkS-2+ CDS 97706 97870 . + 0 ID=cds-MDY4306971.1;Parent=gene-SNF32_05060;Dbxref=NCBI_GP:MDY4306971.1;Name=MDY4306971.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05060;product=hypothetical protein;protein_id=MDY4306971.1;transl_table=11 JAXGFV010000006.1 Genbank gene 97884 98144 . + . ID=gene-SNF32_05065;Name=SNF32_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05065 JAXGFV010000006.1 Protein Homology CDS 97884 98144 . + 0 ID=cds-MDY4306972.1;Parent=gene-SNF32_05065;Dbxref=NCBI_GP:MDY4306972.1;Name=MDY4306972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002377358.1;locus_tag=SNF32_05065;product=EutN/CcmL family microcompartment protein;protein_id=MDY4306972.1;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 98157 99295 . + . ID=gene-SNF32_05070;Name=eutH;gbkey=Gene;gene=eutH;gene_biotype=pseudogene;locus_tag=SNF32_05070;pseudo=true JAXGFV010000006.1 Protein Homology CDS 98157 99295 . + 0 ID=cds-SNF32_05070;Parent=gene-SNF32_05070;Note=frameshifted;gbkey=CDS;gene=eutH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734682.1;locus_tag=SNF32_05070;product=ethanolamine utilization protein EutH;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 99309 99751 . + . ID=gene-SNF32_05075;Name=SNF32_05075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05075;pseudo=true JAXGFV010000006.1 Protein Homology CDS 99309 99751 . + 0 ID=cds-SNF32_05075;Parent=gene-SNF32_05075;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016627024.1;locus_tag=SNF32_05075;product=cupin domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 100141 101023 . + . ID=gene-SNF32_05080;Name=SNF32_05080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05080;pseudo=true JAXGFV010000006.1 Protein Homology CDS 100141 101023 . + 0 ID=cds-SNF32_05080;Parent=gene-SNF32_05080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002345340.1;locus_tag=SNF32_05080;product=diacylglycerol kinase family lipid kinase;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank pseudogene 101370 102397 . + . ID=gene-SNF32_05085;Name=SNF32_05085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05085;pseudo=true JAXGFV010000006.1 Protein Homology CDS 101370 102397 . + 0 ID=cds-SNF32_05085;Parent=gene-SNF32_05085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734685.1;locus_tag=SNF32_05085;product=phosphate/phosphite/phosphonate ABC transporter substrate-binding protein;pseudo=true;transl_table=11 JAXGFV010000006.1 Genbank gene 102410 103162 . + . ID=gene-SNF32_05090;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=SNF32_05090 JAXGFV010000006.1 Protein Homology CDS 102410 103162 . + 0 ID=cds-MDY4306973.1;Parent=gene-SNF32_05090;Dbxref=NCBI_GP:MDY4306973.1;Name=MDY4306973.1;Ontology_term=GO:0015716,GO:0005524,GO:0015416,GO:0009898,GO:0055052;gbkey=CDS;gene=phnC;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734686.1;locus_tag=SNF32_05090;product=phosphonate ABC transporter ATP-binding protein;protein_id=MDY4306973.1;transl_table=11 JAXGFV010000006.1 Genbank gene 103174 103575 . + . ID=gene-SNF32_05095;Name=SNF32_05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05095 JAXGFV010000006.1 GeneMarkS-2+ CDS 103174 103575 . + 0 ID=cds-MDY4306974.1;Parent=gene-SNF32_05095;Dbxref=NCBI_GP:MDY4306974.1;Name=MDY4306974.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05095;product=hypothetical protein;protein_id=MDY4306974.1;transl_table=11 JAXGFV010000006.1 Genbank gene 103548 103970 . + . ID=gene-SNF32_05100;Name=SNF32_05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05100 JAXGFV010000006.1 Protein Homology CDS 103548 103970 . + 0 ID=cds-MDY4306975.1;Parent=gene-SNF32_05100;Dbxref=NCBI_GP:MDY4306975.1;Name=MDY4306975.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012738.3;locus_tag=SNF32_05100;product=ABC transporter permease subunit;protein_id=MDY4306975.1;transl_table=11 JAXGFV010000006.1 Genbank gene 103972 104274 . + . ID=gene-SNF32_05105;Name=SNF32_05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05105 JAXGFV010000006.1 GeneMarkS-2+ CDS 103972 104274 . + 0 ID=cds-MDY4306976.1;Parent=gene-SNF32_05105;Dbxref=NCBI_GP:MDY4306976.1;Name=MDY4306976.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05105;product=hypothetical protein;protein_id=MDY4306976.1;transl_table=11 JAXGFV010000006.1 Genbank gene 104259 104864 . + . ID=gene-SNF32_05110;Name=SNF32_05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05110 JAXGFV010000006.1 Protein Homology CDS 104259 104864 . + 0 ID=cds-MDY4306977.1;Parent=gene-SNF32_05110;Dbxref=NCBI_GP:MDY4306977.1;Name=MDY4306977.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012738.3;locus_tag=SNF32_05110;product=ABC transporter permease subunit;protein_id=MDY4306977.1;transl_table=11 JAXGFV010000006.1 Genbank gene 104902 105738 . + . ID=gene-SNF32_05115;Name=SNF32_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05115 JAXGFV010000006.1 Protein Homology CDS 104902 105738 . + 0 ID=cds-MDY4306978.1;Parent=gene-SNF32_05115;Dbxref=NCBI_GP:MDY4306978.1;Name=MDY4306978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734689.1;locus_tag=SNF32_05115;product=histidinol-phosphatase;protein_id=MDY4306978.1;transl_table=11 ##sequence-region JAXGFV010000060.1 1 12643 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000060.1 Genbank region 1 12643 . + . ID=JAXGFV010000060.1:1..12643;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000060.1 Genbank pseudogene 20 743 . - . ID=gene-SNF32_15065;Name=SNF32_15065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15065;pseudo=true JAXGFV010000060.1 Protein Homology CDS 20 743 . - 0 ID=cds-SNF32_15065;Parent=gene-SNF32_15065;Note=frameshifted;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002315100.1;locus_tag=SNF32_15065;product=peptidylprolyl isomerase;pseudo=true;transl_table=11 JAXGFV010000060.1 Genbank pseudogene 956 2046 . + . ID=gene-SNF32_15070;Name=SNF32_15070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15070;pseudo=true JAXGFV010000060.1 Protein Homology CDS 956 2046 . + 0 ID=cds-SNF32_15070;Parent=gene-SNF32_15070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014571894.1;locus_tag=SNF32_15070;product=DUF871 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000060.1 Genbank pseudogene 2201 3130 . + . ID=gene-SNF32_15075;Name=SNF32_15075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15075;pseudo=true JAXGFV010000060.1 Protein Homology CDS 2201 3130 . + 0 ID=cds-SNF32_15075;Parent=gene-SNF32_15075;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010828788.1;locus_tag=SNF32_15075;product=alpha/beta hydrolase;pseudo=true;transl_table=11 JAXGFV010000060.1 Genbank pseudogene 3382 4694 . + . ID=gene-SNF32_15080;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=pseudogene;locus_tag=SNF32_15080;pseudo=true JAXGFV010000060.1 Protein Homology CDS 3382 4694 . + 0 ID=cds-SNF32_15080;Parent=gene-SNF32_15080;Note=frameshifted;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003126661.1;locus_tag=SNF32_15080;product=GTPase ObgE;pseudo=true;transl_table=11 JAXGFV010000060.1 Genbank gene 4957 5544 . + . ID=gene-SNF32_15085;Name=SNF32_15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15085 JAXGFV010000060.1 Protein Homology CDS 4957 5544 . + 0 ID=cds-MDY4307979.1;Parent=gene-SNF32_15085;Dbxref=NCBI_GP:MDY4307979.1;Name=MDY4307979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735578.1;locus_tag=SNF32_15085;product=DUF1269 domain-containing protein;protein_id=MDY4307979.1;transl_table=11 JAXGFV010000060.1 Genbank pseudogene 5696 6645 . + . ID=gene-SNF32_15090;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=pseudogene;locus_tag=SNF32_15090;pseudo=true JAXGFV010000060.1 Protein Homology CDS 5696 6645 . + 0 ID=cds-SNF32_15090;Parent=gene-SNF32_15090;Note=frameshifted;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rnz;go_function=RNA endonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737502.1;locus_tag=SNF32_15090;product=ribonuclease Z;pseudo=true;transl_table=11 JAXGFV010000060.1 Genbank gene 6629 7417 . + . ID=gene-SNF32_15095;Name=SNF32_15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15095 JAXGFV010000060.1 Protein Homology CDS 6629 7417 . + 0 ID=cds-MDY4307980.1;Parent=gene-SNF32_15095;Dbxref=NCBI_GP:MDY4307980.1;Name=MDY4307980.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002313805.1;locus_tag=SNF32_15095;product=SDR family oxidoreductase;protein_id=MDY4307980.1;transl_table=11 JAXGFV010000060.1 Genbank pseudogene 7444 7859 . + . ID=gene-SNF32_15100;Name=SNF32_15100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15100;pseudo=true JAXGFV010000060.1 Protein Homology CDS 7444 7859 . + 0 ID=cds-SNF32_15100;Parent=gene-SNF32_15100;Note=frameshifted;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002344195.1;locus_tag=SNF32_15100;product=lipopolysaccharide assembly protein LapA domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000060.1 Genbank pseudogene 8092 10376 . + . ID=gene-SNF32_15105;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=pseudogene;locus_tag=SNF32_15105;pseudo=true JAXGFV010000060.1 Protein Homology CDS 8092 10376 . + 0 ID=cds-SNF32_15105;Parent=gene-SNF32_15105;Note=frameshifted;Ontology_term=GO:0006310,GO:0008297;gbkey=CDS;gene=recJ;go_function=single-stranded DNA exodeoxyribonuclease activity|0008297||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016175240.1;locus_tag=SNF32_15105;product=single-stranded-DNA-specific exonuclease RecJ;pseudo=true;transl_table=11 JAXGFV010000060.1 Genbank gene 10399 10911 . + . ID=gene-SNF32_15110;Name=SNF32_15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15110 JAXGFV010000060.1 Protein Homology CDS 10399 10911 . + 0 ID=cds-MDY4307981.1;Parent=gene-SNF32_15110;Dbxref=NCBI_GP:MDY4307981.1;Name=MDY4307981.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002295813.1;locus_tag=SNF32_15110;product=adenine phosphoribosyltransferase;protein_id=MDY4307981.1;transl_table=11 JAXGFV010000060.1 Genbank pseudogene 11115 11332 . - . ID=gene-SNF32_15115;Name=SNF32_15115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15115;pseudo=true JAXGFV010000060.1 Protein Homology CDS 11115 11332 . - 0 ID=cds-SNF32_15115;Parent=gene-SNF32_15115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002297436.1;locus_tag=SNF32_15115;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000060.1 Genbank gene 11509 12132 . - . ID=gene-SNF32_15120;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=SNF32_15120 JAXGFV010000060.1 Protein Homology CDS 11509 12132 . - 0 ID=cds-MDY4307982.1;Parent=gene-SNF32_15120;Dbxref=NCBI_GP:MDY4307982.1;Name=MDY4307982.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010751062.1;locus_tag=SNF32_15120;product=transcriptional repressor LexA;protein_id=MDY4307982.1;transl_table=11 JAXGFV010000060.1 Genbank gene 12299 12532 . + . ID=gene-SNF32_15125;Name=SNF32_15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15125 JAXGFV010000060.1 Protein Homology CDS 12299 12532 . + 0 ID=cds-MDY4307983.1;Parent=gene-SNF32_15125;Dbxref=NCBI_GP:MDY4307983.1;Name=MDY4307983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010719258.1;locus_tag=SNF32_15125;product=DUF896 family protein;protein_id=MDY4307983.1;transl_table=11 ##sequence-region JAXGFV010000061.1 1 12275 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000061.1 Genbank region 1 12275 . + . ID=JAXGFV010000061.1:1..12275;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000061.1 Genbank pseudogene 56 576 . - . ID=gene-SNF32_15130;Name=SNF32_15130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15130;pseudo=true JAXGFV010000061.1 Protein Homology CDS 56 576 . - 2 ID=cds-SNF32_15130;Parent=gene-SNF32_15130;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002327478.1;locus_tag=SNF32_15130;product=PadR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000061.1 Genbank pseudogene 706 1236 . + . ID=gene-SNF32_15135;Name=SNF32_15135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15135;pseudo=true JAXGFV010000061.1 Protein Homology CDS 706 1236 . + 0 ID=cds-SNF32_15135;Parent=gene-SNF32_15135;Note=frameshifted;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019293593.1;locus_tag=SNF32_15135;product=phenolic acid decarboxylase;pseudo=true;transl_table=11 JAXGFV010000061.1 Genbank pseudogene 1481 3117 . + . ID=gene-SNF32_15140;Name=SNF32_15140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15140;pseudo=true JAXGFV010000061.1 Protein Homology CDS 1481 3117 . + 0 ID=cds-SNF32_15140;Parent=gene-SNF32_15140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002376521.1;locus_tag=SNF32_15140;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000061.1 Genbank pseudogene 3468 4297 . - . ID=gene-SNF32_15145;Name=SNF32_15145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15145;pseudo=true JAXGFV010000061.1 Protein Homology CDS 3468 4297 . - 0 ID=cds-SNF32_15145;Parent=gene-SNF32_15145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736384.1;locus_tag=SNF32_15145;product=endonuclease/exonuclease/phosphatase family protein;pseudo=true;transl_table=11 JAXGFV010000061.1 Genbank pseudogene 4425 6585 . - . ID=gene-SNF32_15150;Name=SNF32_15150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15150;pseudo=true JAXGFV010000061.1 Protein Homology CDS 4425 6585 . - 0 ID=cds-SNF32_15150;Parent=gene-SNF32_15150;Note=frameshifted;Ontology_term=GO:0015144;gbkey=CDS;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002353586.1;locus_tag=SNF32_15150;product=PTS transporter subunit IIBC;pseudo=true;transl_table=11 JAXGFV010000061.1 Genbank pseudogene 6867 9159 . + . ID=gene-SNF32_15155;Name=SNF32_15155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15155;pseudo=true JAXGFV010000061.1 Protein Homology CDS 6867 9159 . + 0 ID=cds-SNF32_15155;Parent=gene-SNF32_15155;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002319549.1;locus_tag=SNF32_15155;product=glycoside hydrolase family 65 protein;pseudo=true;transl_table=11 JAXGFV010000061.1 Genbank pseudogene 9152 9815 . + . ID=gene-SNF32_15160;Name=pgmB;gbkey=Gene;gene=pgmB;gene_biotype=pseudogene;locus_tag=SNF32_15160;pseudo=true JAXGFV010000061.1 Protein Homology CDS 9152 9815 . + 0 ID=cds-SNF32_15160;Parent=gene-SNF32_15160;Note=frameshifted;Ontology_term=GO:0046352,GO:0008801;gbkey=CDS;gene=pgmB;go_function=beta-phosphoglucomutase activity|0008801||IEA;go_process=disaccharide catabolic process|0046352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722730.1;locus_tag=SNF32_15160;product=beta-phosphoglucomutase;pseudo=true;transl_table=11 JAXGFV010000061.1 Genbank pseudogene 9808 10815 . + . ID=gene-SNF32_15165;Name=SNF32_15165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15165;pseudo=true JAXGFV010000061.1 Protein Homology CDS 9808 10815 . + 0 ID=cds-SNF32_15165;Parent=gene-SNF32_15165;Note=frameshifted;Ontology_term=GO:0005975,GO:0016857,GO:0030246;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736388.1;locus_tag=SNF32_15165;product=aldose epimerase family protein;pseudo=true;transl_table=11 JAXGFV010000061.1 Genbank pseudogene 10880 11891 . + . ID=gene-SNF32_15170;Name=SNF32_15170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15170;pseudo=true JAXGFV010000061.1 Protein Homology CDS 10880 11891 . + 0 ID=cds-SNF32_15170;Parent=gene-SNF32_15170;Note=frameshifted;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736389.1;locus_tag=SNF32_15170;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000062.1 1 11751 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000062.1 Genbank region 1 11751 . + . ID=JAXGFV010000062.1:1..11751;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000062.1 Genbank pseudogene 177 919 . - . ID=gene-SNF32_15175;Name=SNF32_15175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15175;pseudo=true JAXGFV010000062.1 Protein Homology CDS 177 919 . - 0 ID=cds-SNF32_15175;Parent=gene-SNF32_15175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002289016.1;locus_tag=SNF32_15175;product=alpha/beta hydrolase;pseudo=true;transl_table=11 JAXGFV010000062.1 Genbank gene 1120 1356 . - . ID=gene-SNF32_15180;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=SNF32_15180 JAXGFV010000062.1 Protein Homology CDS 1120 1356 . - 0 ID=cds-MDY4307984.1;Parent=gene-SNF32_15180;Dbxref=NCBI_GP:MDY4307984.1;Name=MDY4307984.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secG;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010718604.1;locus_tag=SNF32_15180;product=preprotein translocase subunit SecG;protein_id=MDY4307984.1;transl_table=11 JAXGFV010000062.1 Genbank gene 1553 1828 . - . ID=gene-SNF32_15185;Name=SNF32_15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15185 JAXGFV010000062.1 Protein Homology CDS 1553 1828 . - 0 ID=cds-MDY4307985.1;Parent=gene-SNF32_15185;Dbxref=NCBI_GP:MDY4307985.1;Name=MDY4307985.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005878447.1;locus_tag=SNF32_15185;product=GNAT family N-acetyltransferase;protein_id=MDY4307985.1;transl_table=11 JAXGFV010000062.1 Genbank pseudogene 1908 2852 . - . ID=gene-SNF32_15190;Name=SNF32_15190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15190;pseudo=true JAXGFV010000062.1 Protein Homology CDS 1908 2852 . - 0 ID=cds-SNF32_15190;Parent=gene-SNF32_15190;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016623439.1;locus_tag=SNF32_15190;product=alpha/beta hydrolase;pseudo=true;transl_table=11 JAXGFV010000062.1 Genbank pseudogene 3238 4207 . + . ID=gene-SNF32_15195;Name=SNF32_15195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15195;pseudo=true JAXGFV010000062.1 Protein Homology CDS 3238 4207 . + 0 ID=cds-SNF32_15195;Parent=gene-SNF32_15195;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002289478.1;locus_tag=SNF32_15195;product=nucleoside hydrolase;pseudo=true;transl_table=11 JAXGFV010000062.1 Genbank pseudogene 4213 4790 . + . ID=gene-SNF32_15200;Name=SNF32_15200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15200;pseudo=true JAXGFV010000062.1 Protein Homology CDS 4213 4790 . + 0 ID=cds-SNF32_15200;Parent=gene-SNF32_15200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734877.1;locus_tag=SNF32_15200;product=ECF transporter S component;pseudo=true;transl_table=11 JAXGFV010000062.1 Genbank gene 4964 5572 . - . ID=gene-SNF32_15205;Name=SNF32_15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15205 JAXGFV010000062.1 Protein Homology CDS 4964 5572 . - 0 ID=cds-MDY4307986.1;Parent=gene-SNF32_15205;Dbxref=NCBI_GP:MDY4307986.1;Name=MDY4307986.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011676213.1;locus_tag=SNF32_15205;product=sugar O-acetyltransferase;protein_id=MDY4307986.1;transl_table=11 JAXGFV010000062.1 Genbank gene 5787 5996 . - . ID=gene-SNF32_15210;Name=SNF32_15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15210 JAXGFV010000062.1 GeneMarkS-2+ CDS 5787 5996 . - 0 ID=cds-MDY4307987.1;Parent=gene-SNF32_15210;Dbxref=NCBI_GP:MDY4307987.1;Name=MDY4307987.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15210;product=hypothetical protein;protein_id=MDY4307987.1;transl_table=11 JAXGFV010000062.1 Genbank gene 6000 6293 . - . ID=gene-SNF32_15215;Name=SNF32_15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15215 JAXGFV010000062.1 Protein Homology CDS 6000 6293 . - 0 ID=cds-MDY4307988.1;Parent=gene-SNF32_15215;Dbxref=NCBI_GP:MDY4307988.1;Name=MDY4307988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723970.1;locus_tag=SNF32_15215;product=hypothetical protein;protein_id=MDY4307988.1;transl_table=11 JAXGFV010000062.1 Genbank gene 6649 7146 . - . ID=gene-SNF32_15220;Name=SNF32_15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15220 JAXGFV010000062.1 GeneMarkS-2+ CDS 6649 7146 . - 0 ID=cds-MDY4307989.1;Parent=gene-SNF32_15220;Dbxref=NCBI_GP:MDY4307989.1;Name=MDY4307989.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15220;product=hypothetical protein;protein_id=MDY4307989.1;transl_table=11 JAXGFV010000062.1 Genbank gene 7086 7361 . - . ID=gene-SNF32_15225;Name=SNF32_15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15225 JAXGFV010000062.1 Protein Homology CDS 7086 7361 . - 0 ID=cds-MDY4307990.1;Parent=gene-SNF32_15225;Dbxref=NCBI_GP:MDY4307990.1;Name=MDY4307990.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022635.3;locus_tag=SNF32_15225;product=Mbeg1-like protein;protein_id=MDY4307990.1;transl_table=11 JAXGFV010000062.1 Genbank gene 7373 7567 . - . ID=gene-SNF32_15230;Name=SNF32_15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15230 JAXGFV010000062.1 GeneMarkS-2+ CDS 7373 7567 . - 0 ID=cds-MDY4307991.1;Parent=gene-SNF32_15230;Dbxref=NCBI_GP:MDY4307991.1;Name=MDY4307991.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15230;product=hypothetical protein;protein_id=MDY4307991.1;transl_table=11 JAXGFV010000062.1 Genbank gene 7695 7889 . - . ID=gene-SNF32_15235;Name=SNF32_15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15235 JAXGFV010000062.1 GeneMarkS-2+ CDS 7695 7889 . - 0 ID=cds-MDY4307992.1;Parent=gene-SNF32_15235;Dbxref=NCBI_GP:MDY4307992.1;Name=MDY4307992.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15235;product=hypothetical protein;protein_id=MDY4307992.1;transl_table=11 JAXGFV010000062.1 Genbank gene 7939 8202 . - . ID=gene-SNF32_15240;Name=SNF32_15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15240 JAXGFV010000062.1 GeneMarkS-2+ CDS 7939 8202 . - 0 ID=cds-MDY4307993.1;Parent=gene-SNF32_15240;Dbxref=NCBI_GP:MDY4307993.1;Name=MDY4307993.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15240;product=hypothetical protein;protein_id=MDY4307993.1;transl_table=11 JAXGFV010000062.1 Genbank gene 8536 8796 . - . ID=gene-SNF32_15245;Name=SNF32_15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15245 JAXGFV010000062.1 GeneMarkS-2+ CDS 8536 8796 . - 0 ID=cds-MDY4307994.1;Parent=gene-SNF32_15245;Dbxref=NCBI_GP:MDY4307994.1;Name=MDY4307994.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15245;product=hypothetical protein;protein_id=MDY4307994.1;transl_table=11 JAXGFV010000062.1 Genbank gene 9446 9853 . + . ID=gene-SNF32_15250;Name=SNF32_15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15250 JAXGFV010000062.1 Protein Homology CDS 9446 9853 . + 0 ID=cds-MDY4307995.1;Parent=gene-SNF32_15250;Dbxref=NCBI_GP:MDY4307995.1;Name=MDY4307995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003127172.1;locus_tag=SNF32_15250;product=hypothetical protein;protein_id=MDY4307995.1;transl_table=11 JAXGFV010000062.1 Genbank gene 9956 10891 . - . ID=gene-SNF32_15255;Name=SNF32_15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15255 JAXGFV010000062.1 Protein Homology CDS 9956 10891 . - 0 ID=cds-MDY4307996.1;Parent=gene-SNF32_15255;Dbxref=NCBI_GP:MDY4307996.1;Name=MDY4307996.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017810.3;locus_tag=SNF32_15255;product=DUF916 domain-containing protein;protein_id=MDY4307996.1;transl_table=11 ##sequence-region JAXGFV010000063.1 1 11312 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000063.1 Genbank region 1 11312 . + . ID=JAXGFV010000063.1:1..11312;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000063.1 Genbank pseudogene 394 1104 . + . ID=gene-SNF32_15260;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=pseudogene;locus_tag=SNF32_15260;pseudo=true JAXGFV010000063.1 Protein Homology CDS 394 1104 . + 0 ID=cds-SNF32_15260;Parent=gene-SNF32_15260;Note=frameshifted;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002342734.1;locus_tag=SNF32_15260;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;pseudo=true;transl_table=11 JAXGFV010000063.1 Genbank gene 1116 1883 . + . ID=gene-SNF32_15265;Name=SNF32_15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15265 JAXGFV010000063.1 Protein Homology CDS 1116 1883 . + 0 ID=cds-MDY4307997.1;Parent=gene-SNF32_15265;Dbxref=NCBI_GP:MDY4307997.1;Name=MDY4307997.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010750889.1;locus_tag=SNF32_15265;product=ParA family protein;protein_id=MDY4307997.1;transl_table=11 JAXGFV010000063.1 Genbank pseudogene 1870 2758 . + . ID=gene-SNF32_15270;Name=SNF32_15270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15270;pseudo=true JAXGFV010000063.1 Protein Homology CDS 1870 2758 . + 0 ID=cds-SNF32_15270;Parent=gene-SNF32_15270;Note=frameshifted;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002345773.1;locus_tag=SNF32_15270;product=ParB/RepB/Spo0J family partition protein;pseudo=true;transl_table=11 JAXGFV010000063.1 Genbank gene 2777 2932 . + . ID=gene-SNF32_15275;Name=SNF32_15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15275 JAXGFV010000063.1 Protein Homology CDS 2777 2932 . + 0 ID=cds-MDY4307998.1;Parent=gene-SNF32_15275;Dbxref=NCBI_GP:MDY4307998.1;Name=MDY4307998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002293106.1;locus_tag=SNF32_15275;product=DUF951 domain-containing protein;protein_id=MDY4307998.1;transl_table=11 JAXGFV010000063.1 Genbank pseudogene 2974 4072 . + . ID=gene-SNF32_15280;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=pseudogene;locus_tag=SNF32_15280;pseudo=true JAXGFV010000063.1 Protein Homology CDS 2974 4072 . + 0 ID=cds-SNF32_15280;Parent=gene-SNF32_15280;Note=frameshifted;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002269933.1;locus_tag=SNF32_15280;product=redox-regulated ATPase YchF;pseudo=true;transl_table=11 JAXGFV010000063.1 Genbank pseudogene 4153 4846 . + . ID=gene-SNF32_15285;Name=SNF32_15285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15285;pseudo=true JAXGFV010000063.1 Protein Homology CDS 4153 4846 . + 0 ID=cds-SNF32_15285;Parent=gene-SNF32_15285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002296943.1;locus_tag=SNF32_15285;product=DUF1129 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000063.1 Genbank gene 5083 5424 . + . ID=gene-SNF32_15290;Name=SNF32_15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15290 JAXGFV010000063.1 Protein Homology CDS 5083 5424 . + 0 ID=cds-MDY4307999.1;Parent=gene-SNF32_15290;Dbxref=NCBI_GP:MDY4307999.1;Name=MDY4307999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734583.1;locus_tag=SNF32_15290;product=hypothetical protein;protein_id=MDY4307999.1;transl_table=11 JAXGFV010000063.1 Genbank gene 5632 5829 . + . ID=gene-SNF32_15295;Name=SNF32_15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15295 JAXGFV010000063.1 GeneMarkS-2+ CDS 5632 5829 . + 0 ID=cds-MDY4308000.1;Parent=gene-SNF32_15295;Dbxref=NCBI_GP:MDY4308000.1;Name=MDY4308000.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15295;product=hypothetical protein;protein_id=MDY4308000.1;transl_table=11 JAXGFV010000063.1 Genbank pseudogene 5826 7180 . + . ID=gene-SNF32_15300;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=pseudogene;locus_tag=SNF32_15300;pseudo=true JAXGFV010000063.1 Protein Homology CDS 5826 7180 . + 0 ID=cds-SNF32_15300;Parent=gene-SNF32_15300;Note=frameshifted;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: protein motif:HMM:NF012690.3;locus_tag=SNF32_15300;product=IMP dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000063.1 Genbank pseudogene 7249 8516 . - . ID=gene-SNF32_15305;Name=serS;gbkey=Gene;gene=serS;gene_biotype=pseudogene;locus_tag=SNF32_15305;pseudo=true JAXGFV010000063.1 Protein Homology CDS 7249 8516 . - 0 ID=cds-SNF32_15305;Parent=gene-SNF32_15305;Note=frameshifted;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002338634.1;locus_tag=SNF32_15305;product=serine--tRNA ligase;pseudo=true;transl_table=11 JAXGFV010000063.1 cmsearch binding_site 8566 8772 . - . ID=id-JAXGFV010000063.1:8566..8772;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.4 JAXGFV010000063.1 Genbank pseudogene 8837 10000 . - . ID=gene-SNF32_15310;Name=SNF32_15310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15310;pseudo=true JAXGFV010000063.1 Protein Homology CDS 8837 10000 . - 0 ID=cds-SNF32_15310;Parent=gene-SNF32_15310;Note=frameshifted;Ontology_term=GO:0007165,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328630.1;locus_tag=SNF32_15310;product=HAMP domain-containing sensor histidine kinase;pseudo=true;transl_table=11 JAXGFV010000063.1 Genbank gene 9990 10679 . - . ID=gene-SNF32_15315;Name=SNF32_15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15315 JAXGFV010000063.1 Protein Homology CDS 9990 10679 . - 0 ID=cds-MDY4308001.1;Parent=gene-SNF32_15315;Dbxref=NCBI_GP:MDY4308001.1;Name=MDY4308001.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002411958.1;locus_tag=SNF32_15315;product=response regulator transcription factor;protein_id=MDY4308001.1;transl_table=11 ##sequence-region JAXGFV010000064.1 1 11278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000064.1 Genbank region 1 11278 . + . ID=JAXGFV010000064.1:1..11278;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000064.1 Genbank gene 293 559 . + . ID=gene-SNF32_15320;Name=SNF32_15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15320 JAXGFV010000064.1 GeneMarkS-2+ CDS 293 559 . + 0 ID=cds-MDY4308002.1;Parent=gene-SNF32_15320;Dbxref=NCBI_GP:MDY4308002.1;Name=MDY4308002.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15320;product=hypothetical protein;protein_id=MDY4308002.1;transl_table=11 JAXGFV010000064.1 Genbank gene 586 792 . + . ID=gene-SNF32_15325;Name=SNF32_15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15325 JAXGFV010000064.1 GeneMarkS-2+ CDS 586 792 . + 0 ID=cds-MDY4308003.1;Parent=gene-SNF32_15325;Dbxref=NCBI_GP:MDY4308003.1;Name=MDY4308003.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15325;product=hypothetical protein;protein_id=MDY4308003.1;transl_table=11 JAXGFV010000064.1 Genbank gene 1284 1445 . + . ID=gene-SNF32_15330;Name=SNF32_15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15330 JAXGFV010000064.1 Protein Homology CDS 1284 1445 . + 0 ID=cds-MDY4308004.1;Parent=gene-SNF32_15330;Dbxref=NCBI_GP:MDY4308004.1;Name=MDY4308004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016176474.1;locus_tag=SNF32_15330;product=hypothetical protein;protein_id=MDY4308004.1;transl_table=11 JAXGFV010000064.1 Genbank gene 1496 2149 . + . ID=gene-SNF32_15335;Name=SNF32_15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15335 JAXGFV010000064.1 Protein Homology CDS 1496 2149 . + 0 ID=cds-MDY4308005.1;Parent=gene-SNF32_15335;Dbxref=NCBI_GP:MDY4308005.1;Name=MDY4308005.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012335.3;locus_tag=SNF32_15335;product=zinc-binding dehydrogenase;protein_id=MDY4308005.1;transl_table=11 JAXGFV010000064.1 Genbank gene 3462 3830 . + . ID=gene-SNF32_15340;Name=SNF32_15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15340 JAXGFV010000064.1 GeneMarkS-2+ CDS 3462 3830 . + 0 ID=cds-MDY4308006.1;Parent=gene-SNF32_15340;Dbxref=NCBI_GP:MDY4308006.1;Name=MDY4308006.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15340;product=hypothetical protein;protein_id=MDY4308006.1;transl_table=11 JAXGFV010000064.1 Genbank gene 4527 4688 . + . ID=gene-SNF32_15345;Name=SNF32_15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15345 JAXGFV010000064.1 Protein Homology CDS 4527 4688 . + 0 ID=cds-MDY4308007.1;Parent=gene-SNF32_15345;Dbxref=NCBI_GP:MDY4308007.1;Name=MDY4308007.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024977.3;locus_tag=SNF32_15345;product=hypothetical protein;protein_id=MDY4308007.1;transl_table=11 JAXGFV010000064.1 Genbank gene 5393 5629 . + . ID=gene-SNF32_15350;Name=SNF32_15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15350 JAXGFV010000064.1 GeneMarkS-2+ CDS 5393 5629 . + 0 ID=cds-MDY4308008.1;Parent=gene-SNF32_15350;Dbxref=NCBI_GP:MDY4308008.1;Name=MDY4308008.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15350;product=hypothetical protein;protein_id=MDY4308008.1;transl_table=11 JAXGFV010000064.1 Genbank gene 5626 5838 . + . ID=gene-SNF32_15355;Name=SNF32_15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15355 JAXGFV010000064.1 GeneMarkS-2+ CDS 5626 5838 . + 0 ID=cds-MDY4308009.1;Parent=gene-SNF32_15355;Dbxref=NCBI_GP:MDY4308009.1;Name=MDY4308009.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15355;product=hypothetical protein;protein_id=MDY4308009.1;transl_table=11 JAXGFV010000064.1 Genbank gene 6125 6499 . + . ID=gene-SNF32_15360;Name=SNF32_15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15360 JAXGFV010000064.1 GeneMarkS-2+ CDS 6125 6499 . + 0 ID=cds-MDY4308010.1;Parent=gene-SNF32_15360;Dbxref=NCBI_GP:MDY4308010.1;Name=MDY4308010.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15360;product=hypothetical protein;protein_id=MDY4308010.1;transl_table=11 JAXGFV010000064.1 Genbank gene 6998 7255 . + . ID=gene-SNF32_15365;Name=SNF32_15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15365 JAXGFV010000064.1 GeneMarkS-2+ CDS 6998 7255 . + 0 ID=cds-MDY4308011.1;Parent=gene-SNF32_15365;Dbxref=NCBI_GP:MDY4308011.1;Name=MDY4308011.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15365;product=hypothetical protein;protein_id=MDY4308011.1;transl_table=11 JAXGFV010000064.1 Genbank gene 7301 7684 . + . ID=gene-SNF32_15370;Name=SNF32_15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15370 JAXGFV010000064.1 GeneMarkS-2+ CDS 7301 7684 . + 0 ID=cds-MDY4308012.1;Parent=gene-SNF32_15370;Dbxref=NCBI_GP:MDY4308012.1;Name=MDY4308012.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15370;product=hypothetical protein;protein_id=MDY4308012.1;transl_table=11 JAXGFV010000064.1 Genbank pseudogene 8097 8767 . + . ID=gene-SNF32_15375;Name=SNF32_15375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15375;pseudo=true JAXGFV010000064.1 Protein Homology CDS 8097 8767 . + 0 ID=cds-SNF32_15375;Parent=gene-SNF32_15375;Note=frameshifted;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014123711.1;locus_tag=SNF32_15375;product=zeta toxin family protein;pseudo=true;transl_table=11 JAXGFV010000064.1 Genbank gene 8757 8918 . + . ID=gene-SNF32_15380;Name=SNF32_15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15380 JAXGFV010000064.1 Protein Homology CDS 8757 8918 . + 0 ID=cds-MDY4308013.1;Parent=gene-SNF32_15380;Dbxref=NCBI_GP:MDY4308013.1;Name=MDY4308013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016176474.1;locus_tag=SNF32_15380;product=hypothetical protein;protein_id=MDY4308013.1;transl_table=11 JAXGFV010000064.1 Genbank gene 9401 9697 . + . ID=gene-SNF32_15385;Name=SNF32_15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15385 JAXGFV010000064.1 Protein Homology CDS 9401 9697 . + 0 ID=cds-MDY4308014.1;Parent=gene-SNF32_15385;Dbxref=NCBI_GP:MDY4308014.1;Name=MDY4308014.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019313.3;locus_tag=SNF32_15385;product=P-loop NTPase fold protein;protein_id=MDY4308014.1;transl_table=11 JAXGFV010000064.1 Genbank gene 9885 10115 . + . ID=gene-SNF32_15390;Name=SNF32_15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15390 JAXGFV010000064.1 GeneMarkS-2+ CDS 9885 10115 . + 0 ID=cds-MDY4308015.1;Parent=gene-SNF32_15390;Dbxref=NCBI_GP:MDY4308015.1;Name=MDY4308015.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15390;product=hypothetical protein;protein_id=MDY4308015.1;transl_table=11 JAXGFV010000064.1 Genbank gene 10676 10981 . + . ID=gene-SNF32_15395;Name=SNF32_15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15395 JAXGFV010000064.1 GeneMarkS-2+ CDS 10676 10981 . + 0 ID=cds-MDY4308016.1;Parent=gene-SNF32_15395;Dbxref=NCBI_GP:MDY4308016.1;Name=MDY4308016.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15395;product=hypothetical protein;protein_id=MDY4308016.1;transl_table=11 JAXGFV010000064.1 Genbank gene 10975 11154 . + . ID=gene-SNF32_15400;Name=SNF32_15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15400 JAXGFV010000064.1 GeneMarkS-2+ CDS 10975 11154 . + 0 ID=cds-MDY4308017.1;Parent=gene-SNF32_15400;Dbxref=NCBI_GP:MDY4308017.1;Name=MDY4308017.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15400;product=hypothetical protein;protein_id=MDY4308017.1;transl_table=11 ##sequence-region JAXGFV010000065.1 1 11201 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000065.1 Genbank region 1 11201 . + . ID=JAXGFV010000065.1:1..11201;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000065.1 Genbank pseudogene 59 408 . - . ID=gene-SNF32_15405;Name=SNF32_15405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15405;pseudo=true JAXGFV010000065.1 Protein Homology CDS 59 408 . - 0 ID=cds-SNF32_15405;Parent=gene-SNF32_15405;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002296672.1;locus_tag=SNF32_15405;product=iron-sulfur cluster biosynthesis family protein;pseudo=true;transl_table=11 JAXGFV010000065.1 Genbank pseudogene 452 1352 . - . ID=gene-SNF32_15410;Name=SNF32_15410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15410;pseudo=true JAXGFV010000065.1 Protein Homology CDS 452 1352 . - 0 ID=cds-SNF32_15410;Parent=gene-SNF32_15410;Note=frameshifted;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735364.1;locus_tag=SNF32_15410;product=glycosyltransferase family 8 protein;pseudo=true;transl_table=11 JAXGFV010000065.1 Genbank pseudogene 1345 2201 . - . ID=gene-SNF32_15415;Name=SNF32_15415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15415;pseudo=true JAXGFV010000065.1 Protein Homology CDS 1345 2201 . - 0 ID=cds-SNF32_15415;Parent=gene-SNF32_15415;Note=frameshifted;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002329245.1;locus_tag=SNF32_15415;product=glycosyltransferase family 8 protein;pseudo=true;transl_table=11 JAXGFV010000065.1 Genbank pseudogene 2525 3336 . + . ID=gene-SNF32_15420;Name=SNF32_15420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15420;pseudo=true JAXGFV010000065.1 Protein Homology CDS 2525 3336 . + 0 ID=cds-SNF32_15420;Parent=gene-SNF32_15420;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735362.1;locus_tag=SNF32_15420;product=Cof-type HAD-IIB family hydrolase;pseudo=true;transl_table=11 JAXGFV010000065.1 Genbank pseudogene 3350 3840 . + . ID=gene-SNF32_15425;Name=SNF32_15425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15425;pseudo=true JAXGFV010000065.1 Protein Homology CDS 3350 3840 . + 0 ID=cds-SNF32_15425;Parent=gene-SNF32_15425;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735361.1;locus_tag=SNF32_15425;product=isochorismatase family cysteine hydrolase;pseudo=true;transl_table=11 JAXGFV010000065.1 Genbank pseudogene 4372 4603 . + . ID=gene-SNF32_15430;Name=SNF32_15430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15430;pseudo=true JAXGFV010000065.1 Protein Homology CDS 4372 4603 . + 0 ID=cds-SNF32_15430;Parent=gene-SNF32_15430;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735359.1;locus_tag=SNF32_15430;product=helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000065.1 Genbank gene 4642 5004 . + . ID=gene-SNF32_15435;Name=SNF32_15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15435 JAXGFV010000065.1 Protein Homology CDS 4642 5004 . + 0 ID=cds-MDY4308018.1;Parent=gene-SNF32_15435;Dbxref=NCBI_GP:MDY4308018.1;Name=MDY4308018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735358.1;locus_tag=SNF32_15435;product=TIGR02328 family protein;protein_id=MDY4308018.1;transl_table=11 JAXGFV010000065.1 Genbank gene 5127 5327 . - . ID=gene-SNF32_15440;Name=SNF32_15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15440 JAXGFV010000065.1 Protein Homology CDS 5127 5327 . - 0 ID=cds-MDY4308019.1;Parent=gene-SNF32_15440;Dbxref=NCBI_GP:MDY4308019.1;Name=MDY4308019.1;Ontology_term=GO:0001072,GO:0003676,GO:0003723,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,nucleic acid binding|0003676||IEA,RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002306603.1;locus_tag=SNF32_15440;product=cold-shock protein;protein_id=MDY4308019.1;transl_table=11 JAXGFV010000065.1 Genbank gene 5512 5988 . - . ID=gene-SNF32_15445;Name=SNF32_15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15445 JAXGFV010000065.1 Protein Homology CDS 5512 5988 . - 0 ID=cds-MDY4308020.1;Parent=gene-SNF32_15445;Dbxref=NCBI_GP:MDY4308020.1;Name=MDY4308020.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724183.1;locus_tag=SNF32_15445;product=flavodoxin family protein;protein_id=MDY4308020.1;transl_table=11 JAXGFV010000065.1 Genbank gene 6404 6874 . + . ID=gene-SNF32_15450;Name=SNF32_15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15450 JAXGFV010000065.1 GeneMarkS-2+ CDS 6404 6874 . + 0 ID=cds-MDY4308021.1;Parent=gene-SNF32_15450;Dbxref=NCBI_GP:MDY4308021.1;Name=MDY4308021.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15450;product=hypothetical protein;protein_id=MDY4308021.1;transl_table=11 JAXGFV010000065.1 Genbank gene 6901 7083 . + . ID=gene-SNF32_15455;Name=SNF32_15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15455 JAXGFV010000065.1 GeneMarkS-2+ CDS 6901 7083 . + 0 ID=cds-MDY4308022.1;Parent=gene-SNF32_15455;Dbxref=NCBI_GP:MDY4308022.1;Name=MDY4308022.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15455;product=hypothetical protein;protein_id=MDY4308022.1;transl_table=11 JAXGFV010000065.1 Genbank gene 7353 7559 . + . ID=gene-SNF32_15460;Name=SNF32_15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15460 JAXGFV010000065.1 GeneMarkS-2+ CDS 7353 7559 . + 0 ID=cds-MDY4308023.1;Parent=gene-SNF32_15460;Dbxref=NCBI_GP:MDY4308023.1;Name=MDY4308023.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15460;product=hypothetical protein;protein_id=MDY4308023.1;transl_table=11 JAXGFV010000065.1 Genbank pseudogene 8249 11069 . - . ID=gene-SNF32_15465;Name=SNF32_15465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15465;pseudo=true JAXGFV010000065.1 Protein Homology CDS 8249 11069 . - 0 ID=cds-SNF32_15465;Parent=gene-SNF32_15465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735352.1;locus_tag=SNF32_15465;product=discoidin domain-containing protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000066.1 1 11000 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000066.1 Genbank region 1 11000 . + . ID=JAXGFV010000066.1:1..11000;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000066.1 Genbank pseudogene 1 1696 . - . ID=gene-SNF32_15470;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=pseudogene;locus_tag=SNF32_15470;pseudo=true JAXGFV010000066.1 Protein Homology CDS 1 1696 . - 0 ID=cds-SNF32_15470;Parent=gene-SNF32_15470;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002346080.1;locus_tag=SNF32_15470;product=excinuclease ABC subunit UvrC;pseudo=true;transl_table=11 JAXGFV010000066.1 Genbank gene 2021 2335 . - . ID=gene-SNF32_15475;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=SNF32_15475 JAXGFV010000066.1 Protein Homology CDS 2021 2335 . - 0 ID=cds-MDY4308024.1;Parent=gene-SNF32_15475;Dbxref=NCBI_GP:MDY4308024.1;Name=MDY4308024.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002290803.1;locus_tag=SNF32_15475;product=thioredoxin;protein_id=MDY4308024.1;transl_table=11 JAXGFV010000066.1 Genbank pseudogene 2421 4776 . - . ID=gene-SNF32_15480;Name=SNF32_15480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15480;pseudo=true JAXGFV010000066.1 Protein Homology CDS 2421 4776 . - 0 ID=cds-SNF32_15480;Parent=gene-SNF32_15480;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016631337.1;locus_tag=SNF32_15480;product=endonuclease MutS2;pseudo=true;transl_table=11 JAXGFV010000066.1 Genbank pseudogene 4883 5429 . - . ID=gene-SNF32_15485;Name=SNF32_15485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15485;pseudo=true JAXGFV010000066.1 Protein Homology CDS 4883 5429 . - 0 ID=cds-SNF32_15485;Parent=gene-SNF32_15485;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629130.1;locus_tag=SNF32_15485;product=CvpA family protein;pseudo=true;transl_table=11 JAXGFV010000066.1 Genbank pseudogene 5459 5861 . - . ID=gene-SNF32_15490;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=pseudogene;locus_tag=SNF32_15490;pseudo=true JAXGFV010000066.1 Protein Homology CDS 5459 5861 . - 0 ID=cds-SNF32_15490;Parent=gene-SNF32_15490;Note=frameshifted;Ontology_term=GO:0051301;gbkey=CDS;gene=zapA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016251788.1;locus_tag=SNF32_15490;product=cell division protein ZapA;pseudo=true;transl_table=11 JAXGFV010000066.1 Genbank pseudogene 6094 6993 . + . ID=gene-SNF32_15495;Name=rnhC;gbkey=Gene;gene=rnhC;gene_biotype=pseudogene;locus_tag=SNF32_15495;pseudo=true JAXGFV010000066.1 Protein Homology CDS 6094 6993 . + 0 ID=cds-SNF32_15495;Parent=gene-SNF32_15495;Note=frameshifted;Ontology_term=GO:0006401,GO:0004523,GO:0005737;gbkey=CDS;gene=rnhC;go_component=cytoplasm|0005737||IEA;go_function=RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002295085.1;locus_tag=SNF32_15495;product=ribonuclease HIII;pseudo=true;transl_table=11 JAXGFV010000066.1 Genbank gene 7092 7985 . + . ID=gene-SNF32_15500;Name=SNF32_15500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15500 JAXGFV010000066.1 Protein Homology CDS 7092 7985 . + 0 ID=cds-MDY4308025.1;Parent=gene-SNF32_15500;Dbxref=NCBI_GP:MDY4308025.1;Name=MDY4308025.1;Ontology_term=GO:0008745,GO:0046872;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002333756.1;locus_tag=SNF32_15500;product=N-acetylmuramoyl-L-alanine amidase;protein_id=MDY4308025.1;transl_table=11 JAXGFV010000066.1 Genbank pseudogene 8112 10391 . - . ID=gene-SNF32_15505;Name=SNF32_15505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15505;pseudo=true JAXGFV010000066.1 Protein Homology CDS 8112 10391 . - 0 ID=cds-SNF32_15505;Parent=gene-SNF32_15505;Note=frameshifted;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722440.1;locus_tag=SNF32_15505;product=glycosyl hydrolase family 18 protein;pseudo=true;transl_table=11 JAXGFV010000066.1 Genbank gene 10731 11000 . - . ID=gene-SNF32_15510;Name=SNF32_15510;end_range=11000,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15510;partial=true JAXGFV010000066.1 Protein Homology CDS 10731 11000 . - 0 ID=cds-MDY4308026.1;Parent=gene-SNF32_15510;Dbxref=NCBI_GP:MDY4308026.1;Name=MDY4308026.1;Ontology_term=GO:0005975,GO:0004553,GO:0030246,GO:0005576;end_range=11000,.;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734828.1;locus_tag=SNF32_15510;partial=true;product=carbohydrate-binding protein;protein_id=MDY4308026.1;transl_table=11 ##sequence-region JAXGFV010000067.1 1 10944 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000067.1 Genbank region 1 10944 . + . ID=JAXGFV010000067.1:1..10944;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000067.1 Genbank gene 237 665 . - . ID=gene-SNF32_15515;Name=SNF32_15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15515 JAXGFV010000067.1 Protein Homology CDS 237 665 . - 0 ID=cds-MDY4308027.1;Parent=gene-SNF32_15515;Dbxref=NCBI_GP:MDY4308027.1;Name=MDY4308027.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734934.1;locus_tag=SNF32_15515;product=GNAT family N-acetyltransferase;protein_id=MDY4308027.1;transl_table=11 JAXGFV010000067.1 Genbank pseudogene 760 1343 . - . ID=gene-SNF32_15520;Name=SNF32_15520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15520;pseudo=true JAXGFV010000067.1 Protein Homology CDS 760 1343 . - 0 ID=cds-SNF32_15520;Parent=gene-SNF32_15520;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724317.1;locus_tag=SNF32_15520;product=YtxH domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000067.1 Genbank pseudogene 1324 1765 . - . ID=gene-SNF32_15525;Name=SNF32_15525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15525;pseudo=true JAXGFV010000067.1 Protein Homology CDS 1324 1765 . - 0 ID=cds-SNF32_15525;Parent=gene-SNF32_15525;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002335987.1;locus_tag=SNF32_15525;product=DUF948 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000067.1 Genbank gene 1888 2850 . - . ID=gene-SNF32_15530;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=SNF32_15530 JAXGFV010000067.1 Protein Homology CDS 1888 2850 . - 0 ID=cds-MDY4308028.1;Parent=gene-SNF32_15530;Dbxref=NCBI_GP:MDY4308028.1;Name=MDY4308028.1;Ontology_term=GO:0009225,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734931.1;locus_tag=SNF32_15530;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=MDY4308028.1;transl_table=11 JAXGFV010000067.1 Genbank gene 2816 3853 . - . ID=gene-SNF32_15535;Name=SNF32_15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15535 JAXGFV010000067.1 Protein Homology CDS 2816 3853 . - 0 ID=cds-MDY4308029.1;Parent=gene-SNF32_15535;Dbxref=NCBI_GP:MDY4308029.1;Name=MDY4308029.1;Ontology_term=GO:0046168,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate catabolic process|0046168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010752480.1;locus_tag=SNF32_15535;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=MDY4308029.1;transl_table=11 JAXGFV010000067.1 Genbank pseudogene 3896 4724 . - . ID=gene-SNF32_15540;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=pseudogene;locus_tag=SNF32_15540;pseudo=true JAXGFV010000067.1 Protein Homology CDS 3896 4724 . - 0 ID=cds-SNF32_15540;Parent=gene-SNF32_15540;Note=frameshifted;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002308605.1;locus_tag=SNF32_15540;product=prolipoprotein diacylglyceryl transferase;pseudo=true;transl_table=11 JAXGFV010000067.1 Genbank pseudogene 4739 5675 . - . ID=gene-SNF32_15545;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=pseudogene;locus_tag=SNF32_15545;pseudo=true JAXGFV010000067.1 Protein Homology CDS 4739 5675 . - 0 ID=cds-SNF32_15545;Parent=gene-SNF32_15545;Note=frameshifted;Ontology_term=GO:0009401,GO:0004674,GO:0016791;gbkey=CDS;gene=hprK;go_function=protein serine/threonine kinase activity|0004674||IEA,phosphatase activity|0016791||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010746706.1;locus_tag=SNF32_15545;product=HPr(Ser) kinase/phosphatase;pseudo=true;transl_table=11 JAXGFV010000067.1 Genbank pseudogene 5904 6259 . - . ID=gene-SNF32_15550;Name=SNF32_15550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15550;pseudo=true JAXGFV010000067.1 Protein Homology CDS 5904 6259 . - 0 ID=cds-SNF32_15550;Parent=gene-SNF32_15550;Note=frameshifted;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734927.1;locus_tag=SNF32_15550;product=phage holin family protein;pseudo=true;transl_table=11 JAXGFV010000067.1 Genbank pseudogene 6259 6572 . - . ID=gene-SNF32_15555;Name=SNF32_15555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15555;pseudo=true JAXGFV010000067.1 Protein Homology CDS 6259 6572 . - 0 ID=cds-SNF32_15555;Parent=gene-SNF32_15555;Note=frameshifted;Ontology_term=GO:0080135,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of cellular response to stress|0080135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002350822.1;locus_tag=SNF32_15555;product=PspC domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000067.1 Genbank pseudogene 6715 8284 . - . ID=gene-SNF32_15560;Name=liaX;gbkey=Gene;gene=liaX;gene_biotype=pseudogene;locus_tag=SNF32_15560;pseudo=true JAXGFV010000067.1 Protein Homology CDS 6715 8284 . - 0 ID=cds-SNF32_15560;Parent=gene-SNF32_15560;Note=frameshifted;gbkey=CDS;gene=liaX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002335990.1;locus_tag=SNF32_15560;product=daptomycin-sensing surface protein LiaX;pseudo=true;transl_table=11 JAXGFV010000067.1 Genbank gene 8490 8774 . - . ID=gene-SNF32_15565;Name=SNF32_15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15565 JAXGFV010000067.1 Protein Homology CDS 8490 8774 . - 0 ID=cds-MDY4308030.1;Parent=gene-SNF32_15565;Dbxref=NCBI_GP:MDY4308030.1;Name=MDY4308030.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019522.3;locus_tag=SNF32_15565;product=YibE/F family protein;protein_id=MDY4308030.1;transl_table=11 JAXGFV010000067.1 Genbank gene 8962 9147 . - . ID=gene-SNF32_15570;Name=SNF32_15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15570 JAXGFV010000067.1 GeneMarkS-2+ CDS 8962 9147 . - 0 ID=cds-MDY4308031.1;Parent=gene-SNF32_15570;Dbxref=NCBI_GP:MDY4308031.1;Name=MDY4308031.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15570;product=hypothetical protein;protein_id=MDY4308031.1;transl_table=11 JAXGFV010000067.1 Genbank gene 9147 9401 . - . ID=gene-SNF32_15575;Name=SNF32_15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15575 JAXGFV010000067.1 Protein Homology CDS 9147 9401 . - 0 ID=cds-MDY4308032.1;Parent=gene-SNF32_15575;Dbxref=NCBI_GP:MDY4308032.1;Name=MDY4308032.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019522.3;locus_tag=SNF32_15575;product=YibE/F family protein;protein_id=MDY4308032.1;transl_table=11 JAXGFV010000067.1 Genbank gene 9380 9493 . - . ID=gene-SNF32_15580;Name=SNF32_15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15580 JAXGFV010000067.1 Protein Homology CDS 9380 9493 . - 0 ID=cds-MDY4308033.1;Parent=gene-SNF32_15580;Dbxref=NCBI_GP:MDY4308033.1;Name=MDY4308033.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019522.3;locus_tag=SNF32_15580;product=hypothetical protein;protein_id=MDY4308033.1;transl_table=11 JAXGFV010000067.1 Genbank gene 9511 10137 . - . ID=gene-SNF32_15585;Name=SNF32_15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15585 JAXGFV010000067.1 Protein Homology CDS 9511 10137 . - 0 ID=cds-MDY4308034.1;Parent=gene-SNF32_15585;Dbxref=NCBI_GP:MDY4308034.1;Name=MDY4308034.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019522.3;locus_tag=SNF32_15585;product=YibE/F family protein;protein_id=MDY4308034.1;transl_table=11 JAXGFV010000067.1 Genbank gene 10773 10944 . - . ID=gene-SNF32_15590;Name=SNF32_15590;end_range=10944,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15590;partial=true JAXGFV010000067.1 Protein Homology CDS 10773 10944 . - 1 ID=cds-MDY4308035.1;Parent=gene-SNF32_15590;Dbxref=NCBI_GP:MDY4308035.1;Name=MDY4308035.1;end_range=10944,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734921.1;locus_tag=SNF32_15590;partial=true;product=PhoU domain-containing protein;protein_id=MDY4308035.1;transl_table=11 ##sequence-region JAXGFV010000068.1 1 10827 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000068.1 Genbank region 1 10827 . + . ID=JAXGFV010000068.1:1..10827;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000068.1 Genbank gene 96 1013 . - . ID=gene-SNF32_15595;Name=SNF32_15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15595 JAXGFV010000068.1 Protein Homology CDS 96 1013 . - 0 ID=cds-MDY4308036.1;Parent=gene-SNF32_15595;Dbxref=NCBI_GP:MDY4308036.1;Name=MDY4308036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008377665.1;locus_tag=SNF32_15595;product=hypothetical protein;protein_id=MDY4308036.1;transl_table=11 JAXGFV010000068.1 Genbank gene 1118 1654 . - . ID=gene-SNF32_15600;Name=SNF32_15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15600 JAXGFV010000068.1 GeneMarkS-2+ CDS 1118 1654 . - 0 ID=cds-MDY4308037.1;Parent=gene-SNF32_15600;Dbxref=NCBI_GP:MDY4308037.1;Name=MDY4308037.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15600;product=hypothetical protein;protein_id=MDY4308037.1;transl_table=11 JAXGFV010000068.1 Genbank gene 1896 2258 . - . ID=gene-SNF32_15605;Name=SNF32_15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15605 JAXGFV010000068.1 Protein Homology CDS 1896 2258 . - 0 ID=cds-MDY4308038.1;Parent=gene-SNF32_15605;Dbxref=NCBI_GP:MDY4308038.1;Name=MDY4308038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003127759.1;locus_tag=SNF32_15605;product=ImmA/IrrE family metallo-endopeptidase;protein_id=MDY4308038.1;transl_table=11 JAXGFV010000068.1 Genbank gene 2309 2629 . - . ID=gene-SNF32_15610;Name=SNF32_15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15610 JAXGFV010000068.1 Protein Homology CDS 2309 2629 . - 0 ID=cds-MDY4308039.1;Parent=gene-SNF32_15610;Dbxref=NCBI_GP:MDY4308039.1;Name=MDY4308039.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002323900.1;locus_tag=SNF32_15610;product=helix-turn-helix transcriptional regulator;protein_id=MDY4308039.1;transl_table=11 JAXGFV010000068.1 Genbank gene 2919 3110 . + . ID=gene-SNF32_15615;Name=SNF32_15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15615 JAXGFV010000068.1 Protein Homology CDS 2919 3110 . + 0 ID=cds-MDY4308040.1;Parent=gene-SNF32_15615;Dbxref=NCBI_GP:MDY4308040.1;Name=MDY4308040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002323901.1;locus_tag=SNF32_15615;product=hypothetical protein;protein_id=MDY4308040.1;transl_table=11 JAXGFV010000068.1 Genbank gene 3097 3384 . + . ID=gene-SNF32_15620;Name=SNF32_15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15620 JAXGFV010000068.1 Protein Homology CDS 3097 3384 . + 0 ID=cds-MDY4308041.1;Parent=gene-SNF32_15620;Dbxref=NCBI_GP:MDY4308041.1;Name=MDY4308041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002309101.1;locus_tag=SNF32_15620;product=DNA-binding protein;protein_id=MDY4308041.1;transl_table=11 JAXGFV010000068.1 Genbank gene 3588 3812 . + . ID=gene-SNF32_15625;Name=SNF32_15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15625 JAXGFV010000068.1 Protein Homology CDS 3588 3812 . + 0 ID=cds-MDY4308042.1;Parent=gene-SNF32_15625;Dbxref=NCBI_GP:MDY4308042.1;Name=MDY4308042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002335811.1;locus_tag=SNF32_15625;product=hypothetical protein;protein_id=MDY4308042.1;transl_table=11 JAXGFV010000068.1 Genbank gene 3824 4054 . + . ID=gene-SNF32_15630;Name=SNF32_15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15630 JAXGFV010000068.1 GeneMarkS-2+ CDS 3824 4054 . + 0 ID=cds-MDY4308043.1;Parent=gene-SNF32_15630;Dbxref=NCBI_GP:MDY4308043.1;Name=MDY4308043.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15630;product=hypothetical protein;protein_id=MDY4308043.1;transl_table=11 JAXGFV010000068.1 Genbank gene 4168 4359 . + . ID=gene-SNF32_15635;Name=SNF32_15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15635 JAXGFV010000068.1 Protein Homology CDS 4168 4359 . + 0 ID=cds-MDY4308044.1;Parent=gene-SNF32_15635;Dbxref=NCBI_GP:MDY4308044.1;Name=MDY4308044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010752196.1;locus_tag=SNF32_15635;product=hypothetical protein;protein_id=MDY4308044.1;transl_table=11 JAXGFV010000068.1 Genbank pseudogene 4362 5382 . + . ID=gene-SNF32_15640;Name=SNF32_15640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15640;pseudo=true JAXGFV010000068.1 Protein Homology CDS 4362 5382 . + 0 ID=cds-SNF32_15640;Parent=gene-SNF32_15640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002341760.1;locus_tag=SNF32_15640;product=RecT family recombinase;pseudo=true;transl_table=11 JAXGFV010000068.1 Genbank gene 5434 6174 . + . ID=gene-SNF32_15645;Name=SNF32_15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15645 JAXGFV010000068.1 Protein Homology CDS 5434 6174 . + 0 ID=cds-MDY4308045.1;Parent=gene-SNF32_15645;Dbxref=NCBI_GP:MDY4308045.1;Name=MDY4308045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002351642.1;locus_tag=SNF32_15645;product=PD-(D/E)XK nuclease-like domain-containing protein;protein_id=MDY4308045.1;transl_table=11 JAXGFV010000068.1 Genbank gene 6189 6692 . + . ID=gene-SNF32_15650;Name=SNF32_15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15650 JAXGFV010000068.1 GeneMarkS-2+ CDS 6189 6692 . + 0 ID=cds-MDY4308046.1;Parent=gene-SNF32_15650;Dbxref=NCBI_GP:MDY4308046.1;Name=MDY4308046.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15650;product=hypothetical protein;protein_id=MDY4308046.1;transl_table=11 JAXGFV010000068.1 Genbank gene 6670 6975 . + . ID=gene-SNF32_15655;Name=SNF32_15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15655 JAXGFV010000068.1 GeneMarkS-2+ CDS 6670 6975 . + 0 ID=cds-MDY4308047.1;Parent=gene-SNF32_15655;Dbxref=NCBI_GP:MDY4308047.1;Name=MDY4308047.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15655;product=hypothetical protein;protein_id=MDY4308047.1;transl_table=11 JAXGFV010000068.1 Genbank pseudogene 6944 7820 . + . ID=gene-SNF32_15660;Name=SNF32_15660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15660;pseudo=true JAXGFV010000068.1 Protein Homology CDS 6944 7820 . + 0 ID=cds-SNF32_15660;Parent=gene-SNF32_15660;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002317350.1;locus_tag=SNF32_15660;product=ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000068.1 Genbank gene 7817 8059 . + . ID=gene-SNF32_15665;Name=SNF32_15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15665 JAXGFV010000068.1 Protein Homology CDS 7817 8059 . + 0 ID=cds-MDY4308048.1;Parent=gene-SNF32_15665;Dbxref=NCBI_GP:MDY4308048.1;Name=MDY4308048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736745.1;locus_tag=SNF32_15665;product=hypothetical protein;protein_id=MDY4308048.1;transl_table=11 JAXGFV010000068.1 Genbank pseudogene 8201 8646 . + . ID=gene-SNF32_15670;Name=SNF32_15670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15670;pseudo=true JAXGFV010000068.1 Protein Homology CDS 8201 8646 . + 0 ID=cds-SNF32_15670;Parent=gene-SNF32_15670;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736747.1;locus_tag=SNF32_15670;product=DUF1064 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000068.1 Genbank gene 8664 8981 . - . ID=gene-SNF32_15675;Name=SNF32_15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15675 JAXGFV010000068.1 GeneMarkS-2+ CDS 8664 8981 . - 0 ID=cds-MDY4308049.1;Parent=gene-SNF32_15675;Dbxref=NCBI_GP:MDY4308049.1;Name=MDY4308049.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15675;product=hypothetical protein;protein_id=MDY4308049.1;transl_table=11 JAXGFV010000068.1 Genbank pseudogene 9145 9716 . + . ID=gene-SNF32_15680;Name=SNF32_15680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15680;pseudo=true JAXGFV010000068.1 Protein Homology CDS 9145 9716 . + 0 ID=cds-SNF32_15680;Parent=gene-SNF32_15680;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736749.1;locus_tag=SNF32_15680;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000068.1 Genbank gene 9716 9904 . + . ID=gene-SNF32_15685;Name=SNF32_15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15685 JAXGFV010000068.1 Protein Homology CDS 9716 9904 . + 0 ID=cds-MDY4308050.1;Parent=gene-SNF32_15685;Dbxref=NCBI_GP:MDY4308050.1;Name=MDY4308050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736750.1;locus_tag=SNF32_15685;product=hypothetical protein;protein_id=MDY4308050.1;transl_table=11 JAXGFV010000068.1 Genbank gene 9914 10108 . + . ID=gene-SNF32_15690;Name=SNF32_15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15690 JAXGFV010000068.1 Protein Homology CDS 9914 10108 . + 0 ID=cds-MDY4308051.1;Parent=gene-SNF32_15690;Dbxref=NCBI_GP:MDY4308051.1;Name=MDY4308051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002303021.1;locus_tag=SNF32_15690;product=hypothetical protein;protein_id=MDY4308051.1;transl_table=11 JAXGFV010000068.1 Genbank gene 10232 10633 . + . ID=gene-SNF32_15695;Name=SNF32_15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15695 JAXGFV010000068.1 Protein Homology CDS 10232 10633 . + 0 ID=cds-MDY4308052.1;Parent=gene-SNF32_15695;Dbxref=NCBI_GP:MDY4308052.1;Name=MDY4308052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010760090.1;locus_tag=SNF32_15695;product=YopX family protein;protein_id=MDY4308052.1;transl_table=11 JAXGFV010000068.1 Genbank gene 10630 10827 . + . ID=gene-SNF32_15700;Name=SNF32_15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15700 JAXGFV010000068.1 Protein Homology CDS 10630 10827 . + 0 ID=cds-MDY4308053.1;Parent=gene-SNF32_15700;Dbxref=NCBI_GP:MDY4308053.1;Name=MDY4308053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010720126.1;locus_tag=SNF32_15700;product=hypothetical protein;protein_id=MDY4308053.1;transl_table=11 ##sequence-region JAXGFV010000069.1 1 10552 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000069.1 Genbank region 1 10552 . + . ID=JAXGFV010000069.1:1..10552;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000069.1 Genbank pseudogene 15 255 . - . ID=gene-SNF32_15705;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=pseudogene;locus_tag=SNF32_15705;pseudo=true JAXGFV010000069.1 Protein Homology CDS 15 255 . - 0 ID=cds-SNF32_15705;Parent=gene-SNF32_15705;Note=frameshifted;Ontology_term=GO:0003723;gbkey=CDS;gene=yaaA;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002293125.1;locus_tag=SNF32_15705;product=S4 domain-containing protein YaaA;pseudo=true;transl_table=11 JAXGFV010000069.1 Genbank gene 461 1591 . - . ID=gene-SNF32_15710;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=SNF32_15710 JAXGFV010000069.1 Protein Homology CDS 461 1591 . - 0 ID=cds-MDY4308054.1;Parent=gene-SNF32_15710;Dbxref=NCBI_GP:MDY4308054.1;Name=MDY4308054.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002288361.1;locus_tag=SNF32_15710;product=DNA polymerase III subunit beta;protein_id=MDY4308054.1;transl_table=11 JAXGFV010000069.1 Genbank pseudogene 1788 3119 . - . ID=gene-SNF32_15715;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=pseudogene;locus_tag=SNF32_15715;pseudo=true JAXGFV010000069.1 Protein Homology CDS 1788 3119 . - 0 ID=cds-SNF32_15715;Parent=gene-SNF32_15715;Note=frameshifted;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010720504.1;locus_tag=SNF32_15715;product=chromosomal replication initiator protein DnaA;pseudo=true;transl_table=11 JAXGFV010000069.1 Genbank gene 3652 3786 . + . ID=gene-SNF32_15720;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=SNF32_15720 JAXGFV010000069.1 Protein Homology CDS 3652 3786 . + 0 ID=cds-MDY4308055.1;Parent=gene-SNF32_15720;Dbxref=NCBI_GP:MDY4308055.1;Name=MDY4308055.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003397591.1;locus_tag=SNF32_15720;product=50S ribosomal protein L34;protein_id=MDY4308055.1;transl_table=11 JAXGFV010000069.1 Genbank gene 3875 4258 . + . ID=gene-SNF32_15725;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=SNF32_15725 JAXGFV010000069.1 Protein Homology CDS 3875 4258 . + 0 ID=cds-MDY4308056.1;Parent=gene-SNF32_15725;Dbxref=NCBI_GP:MDY4308056.1;Name=MDY4308056.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734564.1;locus_tag=SNF32_15725;product=ribonuclease P protein component;protein_id=MDY4308056.1;transl_table=11 JAXGFV010000069.1 Genbank gene 4255 5103 . + . ID=gene-SNF32_15730;Name=SNF32_15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15730 JAXGFV010000069.1 Protein Homology CDS 4255 5103 . + 0 ID=cds-MDY4308057.1;Parent=gene-SNF32_15730;Dbxref=NCBI_GP:MDY4308057.1;Name=MDY4308057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014834377.1;locus_tag=SNF32_15730;product=YidC/Oxa1 family membrane protein insertase;protein_id=MDY4308057.1;transl_table=11 JAXGFV010000069.1 Genbank pseudogene 5090 5832 . + . ID=gene-SNF32_15735;Name=jag;gbkey=Gene;gene=jag;gene_biotype=pseudogene;locus_tag=SNF32_15735;pseudo=true JAXGFV010000069.1 Protein Homology CDS 5090 5832 . + 0 ID=cds-SNF32_15735;Parent=gene-SNF32_15735;Note=frameshifted;Ontology_term=GO:0051510,GO:0003676;gbkey=CDS;gene=jag;go_function=nucleic acid binding|0003676||IEA;go_process=regulation of unidimensional cell growth|0051510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734566.1;locus_tag=SNF32_15735;product=RNA-binding cell elongation regulator Jag/EloR;pseudo=true;transl_table=11 JAXGFV010000069.1 Genbank pseudogene 5992 6329 . - . ID=gene-SNF32_15740;Name=SNF32_15740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15740;pseudo=true JAXGFV010000069.1 Protein Homology CDS 5992 6329 . - 0 ID=cds-SNF32_15740;Parent=gene-SNF32_15740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002299772.1;locus_tag=SNF32_15740;product=heavy metal-binding domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000069.1 Genbank gene 6666 8063 . + . ID=gene-SNF32_15745;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=SNF32_15745 JAXGFV010000069.1 Protein Homology CDS 6666 8063 . + 0 ID=cds-MDY4308058.1;Parent=gene-SNF32_15745;Dbxref=NCBI_GP:MDY4308058.1;Name=MDY4308058.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002295261.1;locus_tag=SNF32_15745;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=MDY4308058.1;transl_table=11 JAXGFV010000069.1 Genbank pseudogene 8078 9978 . + . ID=gene-SNF32_15750;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=pseudogene;locus_tag=SNF32_15750;pseudo=true JAXGFV010000069.1 Protein Homology CDS 8078 9978 . + 0 ID=cds-SNF32_15750;Parent=gene-SNF32_15750;Note=frameshifted;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328632.1;locus_tag=SNF32_15750;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;pseudo=true;transl_table=11 JAXGFV010000069.1 Genbank gene 10056 10552 . - . ID=gene-SNF32_15755;Name=SNF32_15755;end_range=10552,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15755;partial=true JAXGFV010000069.1 Protein Homology CDS 10056 10552 . - 2 ID=cds-MDY4308059.1;Parent=gene-SNF32_15755;Dbxref=NCBI_GP:MDY4308059.1;Name=MDY4308059.1;Ontology_term=GO:0046677,GO:0071555,GO:0005576;end_range=10552,.;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_process=response to antibiotic|0046677||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: protein motif:HMM:NF016763.3;locus_tag=SNF32_15755;partial=true;product=VanZ family protein;protein_id=MDY4308059.1;transl_table=11 ##sequence-region JAXGFV010000007.1 1 92877 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000007.1 Genbank region 1 92877 . + . ID=JAXGFV010000007.1:1..92877;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000007.1 Genbank pseudogene 57 610 . - . ID=gene-SNF32_05120;Name=SNF32_05120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05120;pseudo=true JAXGFV010000007.1 Protein Homology CDS 57 610 . - 0 ID=cds-SNF32_05120;Parent=gene-SNF32_05120;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002920854.1;locus_tag=SNF32_05120;product=ClbS/DfsB family four-helix bundle protein;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank gene 968 1306 . - . ID=gene-SNF32_05125;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=SNF32_05125 JAXGFV010000007.1 Protein Homology CDS 968 1306 . - 0 ID=cds-MDY4306979.1;Parent=gene-SNF32_05125;Dbxref=NCBI_GP:MDY4306979.1;Name=MDY4306979.1;Ontology_term=GO:0030612;gbkey=CDS;gene=arsC;go_function=arsenate reductase (thioredoxin) activity|0030612||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017864614.1;locus_tag=SNF32_05125;product=arsenate reductase (thioredoxin);protein_id=MDY4306979.1;transl_table=11 JAXGFV010000007.1 Genbank gene 1572 1820 . + . ID=gene-SNF32_05130;Name=SNF32_05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05130 JAXGFV010000007.1 Protein Homology CDS 1572 1820 . + 0 ID=cds-MDY4306980.1;Parent=gene-SNF32_05130;Dbxref=NCBI_GP:MDY4306980.1;Name=MDY4306980.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF013540.3;locus_tag=SNF32_05130;product=helix-turn-helix transcriptional regulator;protein_id=MDY4306980.1;transl_table=11 JAXGFV010000007.1 Genbank gene 1842 2096 . + . ID=gene-SNF32_05135;Name=SNF32_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05135 JAXGFV010000007.1 GeneMarkS-2+ CDS 1842 2096 . + 0 ID=cds-MDY4306981.1;Parent=gene-SNF32_05135;Dbxref=NCBI_GP:MDY4306981.1;Name=MDY4306981.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05135;product=hypothetical protein;protein_id=MDY4306981.1;transl_table=11 JAXGFV010000007.1 Genbank gene 2306 2443 . - . ID=gene-SNF32_05140;Name=SNF32_05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05140 JAXGFV010000007.1 GeneMarkS-2+ CDS 2306 2443 . - 0 ID=cds-MDY4306982.1;Parent=gene-SNF32_05140;Dbxref=NCBI_GP:MDY4306982.1;Name=MDY4306982.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05140;product=hypothetical protein;protein_id=MDY4306982.1;transl_table=11 JAXGFV010000007.1 Genbank gene 2446 2751 . - . ID=gene-SNF32_05145;Name=SNF32_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05145 JAXGFV010000007.1 Protein Homology CDS 2446 2751 . - 0 ID=cds-MDY4306983.1;Parent=gene-SNF32_05145;Dbxref=NCBI_GP:MDY4306983.1;Name=MDY4306983.1;Ontology_term=GO:0008080,GO:0016747;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF012792.3;locus_tag=SNF32_05145;product=GNAT family N-acetyltransferase;protein_id=MDY4306983.1;transl_table=11 JAXGFV010000007.1 Genbank gene 2776 2994 . - . ID=gene-SNF32_05150;Name=SNF32_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05150 JAXGFV010000007.1 GeneMarkS-2+ CDS 2776 2994 . - 0 ID=cds-MDY4306984.1;Parent=gene-SNF32_05150;Dbxref=NCBI_GP:MDY4306984.1;Name=MDY4306984.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05150;product=hypothetical protein;protein_id=MDY4306984.1;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 3142 3557 . - . ID=gene-SNF32_05155;Name=SNF32_05155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05155;pseudo=true JAXGFV010000007.1 Protein Homology CDS 3142 3557 . - 0 ID=cds-SNF32_05155;Parent=gene-SNF32_05155;Note=frameshifted;Ontology_term=GO:0008080,GO:0016747;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002325408.1;locus_tag=SNF32_05155;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank gene 3539 4051 . - . ID=gene-SNF32_05160;Name=SNF32_05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05160 JAXGFV010000007.1 Protein Homology CDS 3539 4051 . - 0 ID=cds-MDY4306985.1;Parent=gene-SNF32_05160;Dbxref=NCBI_GP:MDY4306985.1;Name=MDY4306985.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016178.3;locus_tag=SNF32_05160;product=ASCH domain-containing protein;protein_id=MDY4306985.1;transl_table=11 JAXGFV010000007.1 Genbank gene 4324 4830 . + . ID=gene-SNF32_05165;Name=SNF32_05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05165 JAXGFV010000007.1 Protein Homology CDS 4324 4830 . + 0 ID=cds-MDY4306986.1;Parent=gene-SNF32_05165;Dbxref=NCBI_GP:MDY4306986.1;Name=MDY4306986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003042903.1;locus_tag=SNF32_05165;product=phosphoribosylanthranilate isomerase;protein_id=MDY4306986.1;transl_table=11 JAXGFV010000007.1 Genbank gene 5117 5455 . - . ID=gene-SNF32_05170;Name=SNF32_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05170 JAXGFV010000007.1 Protein Homology CDS 5117 5455 . - 0 ID=cds-MDY4306987.1;Parent=gene-SNF32_05170;Dbxref=NCBI_GP:MDY4306987.1;Name=MDY4306987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875052.1;locus_tag=SNF32_05170;product=metal-sulfur cluster assembly factor;protein_id=MDY4306987.1;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 5703 6628 . - . ID=gene-SNF32_05175;Name=SNF32_05175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05175;pseudo=true JAXGFV010000007.1 Protein Homology CDS 5703 6628 . - 0 ID=cds-SNF32_05175;Parent=gene-SNF32_05175;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016625282.1;locus_tag=SNF32_05175;product=YitT family protein;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 6802 7295 . + . ID=gene-SNF32_05180;Name=SNF32_05180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05180;pseudo=true JAXGFV010000007.1 Protein Homology CDS 6802 7295 . + 0 ID=cds-SNF32_05180;Parent=gene-SNF32_05180;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002347660.1;locus_tag=SNF32_05180;product=YajQ family cyclic di-GMP-binding protein;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 7353 9711 . - . ID=gene-SNF32_05185;Name=SNF32_05185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05185;pseudo=true JAXGFV010000007.1 Protein Homology CDS 7353 9711 . - 0 ID=cds-SNF32_05185;Parent=gene-SNF32_05185;Note=frameshifted;Ontology_term=GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723742.1;locus_tag=SNF32_05185;product=ATP-dependent DNA helicase;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 10007 10632 . + . ID=gene-SNF32_05190;Name=SNF32_05190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05190;pseudo=true JAXGFV010000007.1 Protein Homology CDS 10007 10632 . + 0 ID=cds-SNF32_05190;Parent=gene-SNF32_05190;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735633.1;locus_tag=SNF32_05190;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 10656 11359 . + . ID=gene-SNF32_05195;Name=SNF32_05195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05195;pseudo=true JAXGFV010000007.1 Protein Homology CDS 10656 11359 . + 0 ID=cds-SNF32_05195;Parent=gene-SNF32_05195;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002348910.1;locus_tag=SNF32_05195;product=histidine phosphatase family protein;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 11507 12342 . + . ID=gene-SNF32_05200;Name=SNF32_05200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05200;pseudo=true JAXGFV010000007.1 Protein Homology CDS 11507 12342 . + 0 ID=cds-SNF32_05200;Parent=gene-SNF32_05200;Note=frameshifted;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016180289.1;locus_tag=SNF32_05200;product=undecaprenyl-diphosphate phosphatase;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank gene 12440 13138 . - . ID=gene-SNF32_05205;Name=SNF32_05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05205 JAXGFV010000007.1 Protein Homology CDS 12440 13138 . - 0 ID=cds-MDY4306988.1;Parent=gene-SNF32_05205;Dbxref=NCBI_GP:MDY4306988.1;Name=MDY4306988.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.3;locus_tag=SNF32_05205;product=ATP-binding cassette domain-containing protein;protein_id=MDY4306988.1;transl_table=11 JAXGFV010000007.1 Genbank gene 13135 13227 . - . ID=gene-SNF32_05210;Name=SNF32_05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05210 JAXGFV010000007.1 Protein Homology CDS 13135 13227 . - 0 ID=cds-MDY4306989.1;Parent=gene-SNF32_05210;Dbxref=NCBI_GP:MDY4306989.1;Name=MDY4306989.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024256.3;locus_tag=SNF32_05210;product=hypothetical protein;protein_id=MDY4306989.1;transl_table=11 JAXGFV010000007.1 Genbank gene 13336 13719 . - . ID=gene-SNF32_05215;Name=SNF32_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05215 JAXGFV010000007.1 Protein Homology CDS 13336 13719 . - 0 ID=cds-MDY4306990.1;Parent=gene-SNF32_05215;Dbxref=NCBI_GP:MDY4306990.1;Name=MDY4306990.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.3;locus_tag=SNF32_05215;product=ATP-binding cassette domain-containing protein;protein_id=MDY4306990.1;transl_table=11 JAXGFV010000007.1 Genbank gene 13652 13954 . - . ID=gene-SNF32_05220;Name=SNF32_05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05220 JAXGFV010000007.1 Protein Homology CDS 13652 13954 . - 0 ID=cds-MDY4306991.1;Parent=gene-SNF32_05220;Dbxref=NCBI_GP:MDY4306991.1;Name=MDY4306991.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.3;locus_tag=SNF32_05220;product=ATP-binding cassette domain-containing protein;protein_id=MDY4306991.1;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 14536 14867 . + . ID=gene-SNF32_05225;Name=SNF32_05225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05225;pseudo=true JAXGFV010000007.1 Protein Homology CDS 14536 14867 . + 0 ID=cds-SNF32_05225;Parent=gene-SNF32_05225;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723123.1;locus_tag=SNF32_05225;product=PadR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank gene 14956 15276 . + . ID=gene-SNF32_05230;Name=SNF32_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05230 JAXGFV010000007.1 Protein Homology CDS 14956 15276 . + 0 ID=cds-MDY4306992.1;Parent=gene-SNF32_05230;Dbxref=NCBI_GP:MDY4306992.1;Name=MDY4306992.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF038403.1;locus_tag=SNF32_05230;product=permease prefix domain 1-containing protein;protein_id=MDY4306992.1;transl_table=11 JAXGFV010000007.1 Genbank gene 15285 15818 . + . ID=gene-SNF32_05235;Name=SNF32_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05235 JAXGFV010000007.1 GeneMarkS-2+ CDS 15285 15818 . + 0 ID=cds-MDY4306993.1;Parent=gene-SNF32_05235;Dbxref=NCBI_GP:MDY4306993.1;Name=MDY4306993.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05235;product=hypothetical protein;protein_id=MDY4306993.1;transl_table=11 JAXGFV010000007.1 Genbank gene 15999 16238 . - . ID=gene-SNF32_05240;Name=SNF32_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05240 JAXGFV010000007.1 GeneMarkS-2+ CDS 15999 16238 . - 0 ID=cds-MDY4306994.1;Parent=gene-SNF32_05240;Dbxref=NCBI_GP:MDY4306994.1;Name=MDY4306994.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05240;product=hypothetical protein;protein_id=MDY4306994.1;transl_table=11 JAXGFV010000007.1 Genbank gene 16261 16383 . - . ID=gene-SNF32_05245;Name=SNF32_05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05245 JAXGFV010000007.1 GeneMarkS-2+ CDS 16261 16383 . - 0 ID=cds-MDY4306995.1;Parent=gene-SNF32_05245;Dbxref=NCBI_GP:MDY4306995.1;Name=MDY4306995.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05245;product=hypothetical protein;protein_id=MDY4306995.1;transl_table=11 JAXGFV010000007.1 Genbank gene 16589 16891 . - . ID=gene-SNF32_05250;Name=SNF32_05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05250 JAXGFV010000007.1 GeneMarkS-2+ CDS 16589 16891 . - 0 ID=cds-MDY4306996.1;Parent=gene-SNF32_05250;Dbxref=NCBI_GP:MDY4306996.1;Name=MDY4306996.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05250;product=hypothetical protein;protein_id=MDY4306996.1;transl_table=11 JAXGFV010000007.1 Genbank gene 16923 17825 . - . ID=gene-SNF32_05255;Name=SNF32_05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05255 JAXGFV010000007.1 GeneMarkS-2+ CDS 16923 17825 . - 0 ID=cds-MDY4306997.1;Parent=gene-SNF32_05255;Dbxref=NCBI_GP:MDY4306997.1;Name=MDY4306997.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05255;product=DUF2974 domain-containing protein;protein_id=MDY4306997.1;transl_table=11 JAXGFV010000007.1 Genbank gene 17966 18238 . - . ID=gene-SNF32_05260;Name=SNF32_05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05260 JAXGFV010000007.1 Protein Homology CDS 17966 18238 . - 0 ID=cds-MDY4306998.1;Parent=gene-SNF32_05260;Dbxref=NCBI_GP:MDY4306998.1;Name=MDY4306998.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018683.3;locus_tag=SNF32_05260;product=DUF1310 family protein;protein_id=MDY4306998.1;transl_table=11 JAXGFV010000007.1 Genbank gene 18668 19123 . + . ID=gene-SNF32_05265;Name=SNF32_05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05265 JAXGFV010000007.1 Protein Homology CDS 18668 19123 . + 0 ID=cds-MDY4306999.1;Parent=gene-SNF32_05265;Dbxref=NCBI_GP:MDY4306999.1;Name=MDY4306999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002333258.1;locus_tag=SNF32_05265;product=DUF441 domain-containing protein;protein_id=MDY4306999.1;transl_table=11 JAXGFV010000007.1 Genbank gene 19510 19779 . + . ID=gene-SNF32_05270;Name=SNF32_05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05270 JAXGFV010000007.1 Protein Homology CDS 19510 19779 . + 0 ID=cds-MDY4307000.1;Parent=gene-SNF32_05270;Dbxref=NCBI_GP:MDY4307000.1;Name=MDY4307000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002289125.1;locus_tag=SNF32_05270;product=hypothetical protein;protein_id=MDY4307000.1;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 20179 20421 . + . ID=gene-SNF32_05275;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=pseudogene;locus_tag=SNF32_05275;pseudo=true JAXGFV010000007.1 Protein Homology CDS 20179 20421 . + 0 ID=cds-SNF32_05275;Parent=gene-SNF32_05275;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016625292.1;locus_tag=SNF32_05275;product=30S ribosomal protein S20;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 20545 21583 . - . ID=gene-SNF32_05280;Name=holA;gbkey=Gene;gene=holA;gene_biotype=pseudogene;locus_tag=SNF32_05280;pseudo=true JAXGFV010000007.1 Protein Homology CDS 20545 21583 . - 0 ID=cds-SNF32_05280;Parent=gene-SNF32_05280;Note=frameshifted%3B internal stop;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002335027.1;locus_tag=SNF32_05280;product=DNA polymerase III subunit delta;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank gene 21620 21898 . - . ID=gene-SNF32_05285;Name=SNF32_05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05285 JAXGFV010000007.1 GeneMarkS-2+ CDS 21620 21898 . - 0 ID=cds-MDY4307001.1;Parent=gene-SNF32_05285;Dbxref=NCBI_GP:MDY4307001.1;Name=MDY4307001.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05285;product=hypothetical protein;protein_id=MDY4307001.1;transl_table=11 JAXGFV010000007.1 Genbank gene 21895 22494 . - . ID=gene-SNF32_05290;Name=SNF32_05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05290 JAXGFV010000007.1 Protein Homology CDS 21895 22494 . - 0 ID=cds-MDY4307002.1;Parent=gene-SNF32_05290;Dbxref=NCBI_GP:MDY4307002.1;Name=MDY4307002.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF012955.3;locus_tag=SNF32_05290;product=MBL fold metallo-hydrolase;protein_id=MDY4307002.1;transl_table=11 JAXGFV010000007.1 Genbank gene 22446 23270 . - . ID=gene-SNF32_05295;Name=SNF32_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05295 JAXGFV010000007.1 Protein Homology CDS 22446 23270 . - 0 ID=cds-MDY4307003.1;Parent=gene-SNF32_05295;Dbxref=NCBI_GP:MDY4307003.1;Name=MDY4307003.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015714.3;locus_tag=SNF32_05295;product=ComEC/Rec2 family competence protein;protein_id=MDY4307003.1;transl_table=11 JAXGFV010000007.1 Genbank gene 23236 23631 . - . ID=gene-SNF32_05300;Name=SNF32_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05300 JAXGFV010000007.1 GeneMarkS-2+ CDS 23236 23631 . - 0 ID=cds-MDY4307004.1;Parent=gene-SNF32_05300;Dbxref=NCBI_GP:MDY4307004.1;Name=MDY4307004.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05300;product=hypothetical protein;protein_id=MDY4307004.1;transl_table=11 JAXGFV010000007.1 Genbank gene 23706 23891 . - . ID=gene-SNF32_05305;Name=SNF32_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05305 JAXGFV010000007.1 GeneMarkS-2+ CDS 23706 23891 . - 0 ID=cds-MDY4307005.1;Parent=gene-SNF32_05305;Dbxref=NCBI_GP:MDY4307005.1;Name=MDY4307005.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05305;product=hypothetical protein;protein_id=MDY4307005.1;transl_table=11 JAXGFV010000007.1 Genbank gene 23884 24366 . - . ID=gene-SNF32_05310;Name=SNF32_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05310 JAXGFV010000007.1 Protein Homology CDS 23884 24366 . - 0 ID=cds-MDY4307006.1;Parent=gene-SNF32_05310;Dbxref=NCBI_GP:MDY4307006.1;Name=MDY4307006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723128.1;locus_tag=SNF32_05310;product=ComE operon protein 2;protein_id=MDY4307006.1;transl_table=11 JAXGFV010000007.1 Genbank gene 24386 24949 . - . ID=gene-SNF32_05315;Name=SNF32_05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05315 JAXGFV010000007.1 Protein Homology CDS 24386 24949 . - 0 ID=cds-MDY4307007.1;Parent=gene-SNF32_05315;Dbxref=NCBI_GP:MDY4307007.1;Name=MDY4307007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010751136.1;locus_tag=SNF32_05315;product=helix-hairpin-helix domain-containing protein;protein_id=MDY4307007.1;transl_table=11 JAXGFV010000007.1 Genbank gene 25127 25291 . + . ID=gene-SNF32_05320;Name=SNF32_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05320 JAXGFV010000007.1 GeneMarkS-2+ CDS 25127 25291 . + 0 ID=cds-MDY4307008.1;Parent=gene-SNF32_05320;Dbxref=NCBI_GP:MDY4307008.1;Name=MDY4307008.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05320;product=hypothetical protein;protein_id=MDY4307008.1;transl_table=11 JAXGFV010000007.1 Genbank gene 25757 26116 . - . ID=gene-SNF32_05325;Name=SNF32_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05325 JAXGFV010000007.1 GeneMarkS-2+ CDS 25757 26116 . - 0 ID=cds-MDY4307009.1;Parent=gene-SNF32_05325;Dbxref=NCBI_GP:MDY4307009.1;Name=MDY4307009.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05325;product=hypothetical protein;protein_id=MDY4307009.1;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 26597 27600 . - . ID=gene-SNF32_05330;Name=SNF32_05330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05330;pseudo=true JAXGFV010000007.1 Protein Homology CDS 26597 27600 . - 0 ID=cds-SNF32_05330;Parent=gene-SNF32_05330;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002374474.1;locus_tag=SNF32_05330;product=SepM family pheromone-processing serine protease;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 27625 28115 . - . ID=gene-SNF32_05335;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=pseudogene;locus_tag=SNF32_05335;pseudo=true JAXGFV010000007.1 Protein Homology CDS 27625 28115 . - 0 ID=cds-SNF32_05335;Parent=gene-SNF32_05335;Note=frameshifted;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735654.1;locus_tag=SNF32_05335;product=pantetheine-phosphate adenylyltransferase;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 28116 28671 . - . ID=gene-SNF32_05340;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=pseudogene;locus_tag=SNF32_05340;pseudo=true JAXGFV010000007.1 Protein Homology CDS 28116 28671 . - 0 ID=cds-SNF32_05340;Parent=gene-SNF32_05340;Note=frameshifted;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723134.1;locus_tag=SNF32_05340;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank gene 28853 29194 . - . ID=gene-SNF32_05345;Name=SNF32_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05345 JAXGFV010000007.1 Protein Homology CDS 28853 29194 . - 0 ID=cds-MDY4307010.1;Parent=gene-SNF32_05345;Dbxref=NCBI_GP:MDY4307010.1;Name=MDY4307010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005876514.1;locus_tag=SNF32_05345;product=YlbG family protein;protein_id=MDY4307010.1;transl_table=11 JAXGFV010000007.1 Genbank gene 29215 29517 . - . ID=gene-SNF32_05350;Name=SNF32_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05350 JAXGFV010000007.1 Protein Homology CDS 29215 29517 . - 0 ID=cds-MDY4307011.1;Parent=gene-SNF32_05350;Dbxref=NCBI_GP:MDY4307011.1;Name=MDY4307011.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017902.3;locus_tag=SNF32_05350;product=YlbF family regulator;protein_id=MDY4307011.1;transl_table=11 JAXGFV010000007.1 Genbank gene 29592 30722 . - . ID=gene-SNF32_05355;Name=SNF32_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05355 JAXGFV010000007.1 Protein Homology CDS 29592 30722 . - 0 ID=cds-MDY4307012.1;Parent=gene-SNF32_05355;Dbxref=NCBI_GP:MDY4307012.1;Name=MDY4307012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735658.1;locus_tag=SNF32_05355;product=CAP-associated domain-containing protein;protein_id=MDY4307012.1;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 30740 34165 . - . ID=gene-SNF32_05360;Name=SNF32_05360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05360;pseudo=true JAXGFV010000007.1 Protein Homology CDS 30740 34165 . - 0 ID=cds-SNF32_05360;Parent=gene-SNF32_05360;Note=frameshifted;Ontology_term=GO:0006090,GO:0006094,GO:0004736,GO:0005524,GO:0009374,GO:0046872;gbkey=CDS;go_function=pyruvate carboxylase activity|0004736||IEA,ATP binding|0005524||IEA,biotin binding|0009374||IEA,metal ion binding|0046872||IEA;go_process=pyruvate metabolic process|0006090||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002327081.1;locus_tag=SNF32_05360;product=pyruvate carboxylase;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 34187 35321 . - . ID=gene-SNF32_05365;Name=SNF32_05365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05365;pseudo=true JAXGFV010000007.1 Protein Homology CDS 34187 35321 . - 0 ID=cds-SNF32_05365;Parent=gene-SNF32_05365;Note=frameshifted;Ontology_term=GO:0009252,GO:0051301;gbkey=CDS;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010751144.1;locus_tag=SNF32_05365;product=FtsW/RodA/SpoVE family cell cycle protein;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 35350 35651 . - . ID=gene-SNF32_05370;Name=SNF32_05370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05370;pseudo=true JAXGFV010000007.1 Protein Homology CDS 35350 35651 . - 0 ID=cds-SNF32_05370;Parent=gene-SNF32_05370;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002298990.1;locus_tag=SNF32_05370;product=YlaN family protein;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 35748 37538 . - . ID=gene-SNF32_05375;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=pseudogene;locus_tag=SNF32_05375;pseudo=true JAXGFV010000007.1 Protein Homology CDS 35748 37538 . - 0 ID=cds-SNF32_05375;Parent=gene-SNF32_05375;Note=frameshifted;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735662.1;locus_tag=SNF32_05375;product=DNA helicase RecQ;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank gene 37956 38894 . - . ID=gene-SNF32_05380;Name=SNF32_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05380 JAXGFV010000007.1 Protein Homology CDS 37956 38894 . - 0 ID=cds-MDY4307013.1;Parent=gene-SNF32_05380;Dbxref=NCBI_GP:MDY4307013.1;Name=MDY4307013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015244.3;locus_tag=SNF32_05380;product=putative mucin/carbohydrate-binding domain-containing protein;protein_id=MDY4307013.1;transl_table=11 JAXGFV010000007.1 Genbank gene 38954 42031 . - . ID=gene-SNF32_05385;Name=SNF32_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05385 JAXGFV010000007.1 GeneMarkS-2+ CDS 38954 42031 . - 0 ID=cds-MDY4307014.1;Parent=gene-SNF32_05385;Dbxref=NCBI_GP:MDY4307014.1;Name=MDY4307014.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05385;product=cell wall protein;protein_id=MDY4307014.1;transl_table=11 JAXGFV010000007.1 Genbank gene 42190 42723 . - . ID=gene-SNF32_05390;Name=SNF32_05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05390 JAXGFV010000007.1 GeneMarkS-2+ CDS 42190 42723 . - 0 ID=cds-MDY4307015.1;Parent=gene-SNF32_05390;Dbxref=NCBI_GP:MDY4307015.1;Name=MDY4307015.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05390;product=hypothetical protein;protein_id=MDY4307015.1;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 43579 45399 . - . ID=gene-SNF32_05395;Name=typA;gbkey=Gene;gene=typA;gene_biotype=pseudogene;locus_tag=SNF32_05395;pseudo=true JAXGFV010000007.1 Protein Homology CDS 43579 45399 . - 0 ID=cds-SNF32_05395;Parent=gene-SNF32_05395;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006412,GO:0006950,GO:0005525;gbkey=CDS;gene=typA;go_function=GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016176758.1;locus_tag=SNF32_05395;product=translational GTPase TypA;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 45742 46508 . - . ID=gene-SNF32_05400;Name=SNF32_05400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05400;pseudo=true JAXGFV010000007.1 Protein Homology CDS 45742 46508 . - 0 ID=cds-SNF32_05400;Parent=gene-SNF32_05400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016628723.1;locus_tag=SNF32_05400;product=inositol monophosphatase family protein;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank gene 46513 46788 . - . ID=gene-SNF32_05405;Name=SNF32_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05405 JAXGFV010000007.1 Protein Homology CDS 46513 46788 . - 0 ID=cds-MDY4307016.1;Parent=gene-SNF32_05405;Dbxref=NCBI_GP:MDY4307016.1;Name=MDY4307016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002292206.1;locus_tag=SNF32_05405;product=UPF0223 family protein;protein_id=MDY4307016.1;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 46956 48360 . - . ID=gene-SNF32_05410;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=pseudogene;locus_tag=SNF32_05410;pseudo=true JAXGFV010000007.1 Protein Homology CDS 46956 48360 . - 0 ID=cds-SNF32_05410;Parent=gene-SNF32_05410;Note=frameshifted;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735668.1;locus_tag=SNF32_05410;product=dihydrolipoyl dehydrogenase;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank gene 48367 50019 . - . ID=gene-SNF32_05415;Name=SNF32_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05415 JAXGFV010000007.1 Protein Homology CDS 48367 50019 . - 0 ID=cds-MDY4307017.1;Parent=gene-SNF32_05415;Dbxref=NCBI_GP:MDY4307017.1;Name=MDY4307017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002374447.1;locus_tag=SNF32_05415;product=dihydrolipoyllysine-residue acetyltransferase;protein_id=MDY4307017.1;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 50044 51041 . - . ID=gene-SNF32_05420;Name=SNF32_05420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05420;pseudo=true JAXGFV010000007.1 Protein Homology CDS 50044 51041 . - 0 ID=cds-SNF32_05420;Parent=gene-SNF32_05420;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005876487.1;locus_tag=SNF32_05420;product=alpha-ketoacid dehydrogenase subunit beta;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 51019 52126 . - . ID=gene-SNF32_05425;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=pseudogene;locus_tag=SNF32_05425;pseudo=true JAXGFV010000007.1 Protein Homology CDS 51019 52126 . - 0 ID=cds-SNF32_05425;Parent=gene-SNF32_05425;Note=frameshifted;Ontology_term=GO:0006086,GO:0004739,GO:0045250;gbkey=CDS;gene=pdhA;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016625315.1;locus_tag=SNF32_05425;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 52641 54074 . - . ID=gene-SNF32_05430;Name=SNF32_05430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05430;pseudo=true JAXGFV010000007.1 Protein Homology CDS 52641 54074 . - 0 ID=cds-SNF32_05430;Parent=gene-SNF32_05430;Note=frameshifted;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735672.1;locus_tag=SNF32_05430;product=PLP-dependent aminotransferase family protein;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank gene 54316 55293 . - . ID=gene-SNF32_05435;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=SNF32_05435 JAXGFV010000007.1 Protein Homology CDS 54316 55293 . - 0 ID=cds-MDY4307018.1;Parent=gene-SNF32_05435;Dbxref=NCBI_GP:MDY4307018.1;Name=MDY4307018.1;Ontology_term=GO:0015950,GO:0003920;gbkey=CDS;gene=guaC;go_function=GMP reductase activity|0003920||IEA;go_process=purine nucleotide interconversion|0015950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003127210.1;locus_tag=SNF32_05435;product=GMP reductase;protein_id=MDY4307018.1;transl_table=11 JAXGFV010000007.1 Genbank gene 55438 55809 . - . ID=gene-SNF32_05440;Name=SNF32_05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05440 JAXGFV010000007.1 GeneMarkS-2+ CDS 55438 55809 . - 0 ID=cds-MDY4307019.1;Parent=gene-SNF32_05440;Dbxref=NCBI_GP:MDY4307019.1;Name=MDY4307019.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05440;product=hypothetical protein;protein_id=MDY4307019.1;transl_table=11 JAXGFV010000007.1 Genbank gene 55815 56270 . - . ID=gene-SNF32_05445;Name=SNF32_05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05445 JAXGFV010000007.1 GeneMarkS-2+ CDS 55815 56270 . - 0 ID=cds-MDY4307020.1;Parent=gene-SNF32_05445;Dbxref=NCBI_GP:MDY4307020.1;Name=MDY4307020.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05445;product=hypothetical protein;protein_id=MDY4307020.1;transl_table=11 JAXGFV010000007.1 Genbank gene 56380 56643 . - . ID=gene-SNF32_05450;Name=SNF32_05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05450 JAXGFV010000007.1 GeneMarkS-2+ CDS 56380 56643 . - 0 ID=cds-MDY4307021.1;Parent=gene-SNF32_05450;Dbxref=NCBI_GP:MDY4307021.1;Name=MDY4307021.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05450;product=hypothetical protein;protein_id=MDY4307021.1;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 56748 57660 . - . ID=gene-SNF32_05455;Name=SNF32_05455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05455;pseudo=true JAXGFV010000007.1 Protein Homology CDS 56748 57660 . - 0 ID=cds-SNF32_05455;Parent=gene-SNF32_05455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016631494.1;locus_tag=SNF32_05455;product=aldo/keto reductase;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 57777 59038 . - . ID=gene-SNF32_05460;Name=purD;gbkey=Gene;gene=purD;gene_biotype=pseudogene;locus_tag=SNF32_05460;pseudo=true JAXGFV010000007.1 Protein Homology CDS 57777 59038 . - 0 ID=cds-SNF32_05460;Parent=gene-SNF32_05460;Note=frameshifted;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735676.1;locus_tag=SNF32_05460;product=phosphoribosylamine--glycine ligase;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 59054 60584 . - . ID=gene-SNF32_05465;Name=purH;gbkey=Gene;gene=purH;gene_biotype=pseudogene;locus_tag=SNF32_05465;pseudo=true JAXGFV010000007.1 Protein Homology CDS 59054 60584 . - 0 ID=cds-SNF32_05465;Parent=gene-SNF32_05465;Note=frameshifted;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629746.1;locus_tag=SNF32_05465;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 60553 61156 . - . ID=gene-SNF32_05470;Name=purN;gbkey=Gene;gene=purN;gene_biotype=pseudogene;locus_tag=SNF32_05470;pseudo=true JAXGFV010000007.1 Protein Homology CDS 60553 61156 . - 0 ID=cds-SNF32_05470;Parent=gene-SNF32_05470;Note=frameshifted;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873397.1;locus_tag=SNF32_05470;product=phosphoribosylglycinamide formyltransferase;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 61119 62194 . - . ID=gene-SNF32_05475;Name=purM;gbkey=Gene;gene=purM;gene_biotype=pseudogene;locus_tag=SNF32_05475;pseudo=true JAXGFV010000007.1 Protein Homology CDS 61119 62194 . - 0 ID=cds-SNF32_05475;Parent=gene-SNF32_05475;Note=frameshifted;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724551.1;locus_tag=SNF32_05475;product=phosphoribosylformylglycinamidine cyclo-ligase;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 62212 63661 . - . ID=gene-SNF32_05480;Name=purF;gbkey=Gene;gene=purF;gene_biotype=pseudogene;locus_tag=SNF32_05480;pseudo=true JAXGFV010000007.1 Protein Homology CDS 62212 63661 . - 0 ID=cds-SNF32_05480;Parent=gene-SNF32_05480;Note=frameshifted;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010709485.1;locus_tag=SNF32_05480;product=amidophosphoribosyltransferase;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank gene 63646 65868 . - . ID=gene-SNF32_05485;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=SNF32_05485 JAXGFV010000007.1 Protein Homology CDS 63646 65868 . - 0 ID=cds-MDY4307022.1;Parent=gene-SNF32_05485;Dbxref=NCBI_GP:MDY4307022.1;Name=MDY4307022.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016628361.1;locus_tag=SNF32_05485;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=MDY4307022.1;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 65869 66541 . - . ID=gene-SNF32_05490;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=pseudogene;locus_tag=SNF32_05490;pseudo=true JAXGFV010000007.1 Protein Homology CDS 65869 66541 . - 0 ID=cds-SNF32_05490;Parent=gene-SNF32_05490;Note=frameshifted;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purQ;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735682.1;locus_tag=SNF32_05490;product=phosphoribosylformylglycinamidine synthase subunit PurQ;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank gene 66543 66797 . - . ID=gene-SNF32_05495;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=SNF32_05495 JAXGFV010000007.1 Protein Homology CDS 66543 66797 . - 0 ID=cds-MDY4307023.1;Parent=gene-SNF32_05495;Dbxref=NCBI_GP:MDY4307023.1;Name=MDY4307023.1;gbkey=CDS;gene=purS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002339374.1;locus_tag=SNF32_05495;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=MDY4307023.1;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 66801 67529 . - . ID=gene-SNF32_05500;Name=purC;gbkey=Gene;gene=purC;gene_biotype=pseudogene;locus_tag=SNF32_05500;pseudo=true JAXGFV010000007.1 Protein Homology CDS 66801 67529 . - 0 ID=cds-SNF32_05500;Parent=gene-SNF32_05500;Note=frameshifted;Ontology_term=GO:0009152,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724080.1;locus_tag=SNF32_05500;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank gene 67786 68163 . + . ID=gene-SNF32_05505;Name=SNF32_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05505 JAXGFV010000007.1 Protein Homology CDS 67786 68163 . + 0 ID=cds-MDY4307024.1;Parent=gene-SNF32_05505;Dbxref=NCBI_GP:MDY4307024.1;Name=MDY4307024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735685.1;locus_tag=SNF32_05505;product=hypothetical protein;protein_id=MDY4307024.1;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 68301 69595 . - . ID=gene-SNF32_05510;Name=purB;gbkey=Gene;gene=purB;gene_biotype=pseudogene;locus_tag=SNF32_05510;pseudo=true JAXGFV010000007.1 Protein Homology CDS 68301 69595 . - 0 ID=cds-SNF32_05510;Parent=gene-SNF32_05510;Note=frameshifted;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735686.1;locus_tag=SNF32_05510;product=adenylosuccinate lyase;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 69609 70730 . - . ID=gene-SNF32_05515;Name=purK;gbkey=Gene;gene=purK;gene_biotype=pseudogene;locus_tag=SNF32_05515;pseudo=true JAXGFV010000007.1 Protein Homology CDS 69609 70730 . - 0 ID=cds-SNF32_05515;Parent=gene-SNF32_05515;Note=frameshifted;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005876455.1;locus_tag=SNF32_05515;product=5-(carboxyamino)imidazole ribonucleotide synthase;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank gene 70723 71211 . - . ID=gene-SNF32_05520;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=SNF32_05520 JAXGFV010000007.1 Protein Homology CDS 70723 71211 . - 0 ID=cds-MDY4307025.1;Parent=gene-SNF32_05520;Dbxref=NCBI_GP:MDY4307025.1;Name=MDY4307025.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002318412.1;locus_tag=SNF32_05520;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=MDY4307025.1;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 71653 72477 . - . ID=gene-SNF32_05525;Name=SNF32_05525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05525;pseudo=true JAXGFV010000007.1 Protein Homology CDS 71653 72477 . - 0 ID=cds-SNF32_05525;Parent=gene-SNF32_05525;Note=internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013056.3;locus_tag=SNF32_05525;product=solute carrier family 23 protein;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank gene 72560 72952 . - . ID=gene-SNF32_05530;Name=SNF32_05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05530 JAXGFV010000007.1 Protein Homology CDS 72560 72952 . - 0 ID=cds-MDY4307026.1;Parent=gene-SNF32_05530;Dbxref=NCBI_GP:MDY4307026.1;Name=MDY4307026.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013056.3;locus_tag=SNF32_05530;product=solute carrier family 23 protein;protein_id=MDY4307026.1;transl_table=11 JAXGFV010000007.1 Genbank gene 72955 73536 . - . ID=gene-SNF32_05535;Name=SNF32_05535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05535 JAXGFV010000007.1 Protein Homology CDS 72955 73536 . - 0 ID=cds-MDY4307027.1;Parent=gene-SNF32_05535;Dbxref=NCBI_GP:MDY4307027.1;Name=MDY4307027.1;Ontology_term=GO:0043101,GO:0046110,GO:0016763;gbkey=CDS;go_function=pentosyltransferase activity|0016763||IEA;go_process=purine-containing compound salvage|0043101||IEA,xanthine metabolic process|0046110||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002400819.1;locus_tag=SNF32_05535;product=xanthine phosphoribosyltransferase;protein_id=MDY4307027.1;transl_table=11 JAXGFV010000007.1 cmsearch riboswitch 73621 73718 . - . ID=id-JAXGFV010000007.1:73621..73718;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch JAXGFV010000007.1 Genbank gene 73995 74672 . - . ID=gene-SNF32_05540;Name=SNF32_05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05540 JAXGFV010000007.1 Protein Homology CDS 73995 74672 . - 0 ID=cds-MDY4307028.1;Parent=gene-SNF32_05540;Dbxref=NCBI_GP:MDY4307028.1;Name=MDY4307028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735691.1;locus_tag=SNF32_05540;product=hydrolase;protein_id=MDY4307028.1;transl_table=11 JAXGFV010000007.1 Genbank gene 74697 75296 . - . ID=gene-SNF32_05545;Name=SNF32_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05545 JAXGFV010000007.1 Protein Homology CDS 74697 75296 . - 0 ID=cds-MDY4307029.1;Parent=gene-SNF32_05545;Dbxref=NCBI_GP:MDY4307029.1;Name=MDY4307029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003127188.1;locus_tag=SNF32_05545;product=glycoside hydrolase family 73 protein;protein_id=MDY4307029.1;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 75319 76116 . - . ID=gene-SNF32_05550;Name=SNF32_05550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05550;pseudo=true JAXGFV010000007.1 Protein Homology CDS 75319 76116 . - 0 ID=cds-SNF32_05550;Parent=gene-SNF32_05550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002374382.1;locus_tag=SNF32_05550;product=M15 family metallopeptidase;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 76129 76662 . - . ID=gene-SNF32_05555;Name=SNF32_05555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05555;pseudo=true JAXGFV010000007.1 Protein Homology CDS 76129 76662 . - 0 ID=cds-SNF32_05555;Parent=gene-SNF32_05555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735694.1;locus_tag=SNF32_05555;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 76833 77811 . + . ID=gene-SNF32_05560;Name=SNF32_05560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05560;pseudo=true JAXGFV010000007.1 Protein Homology CDS 76833 77811 . + 0 ID=cds-SNF32_05560;Parent=gene-SNF32_05560;Note=frameshifted;Ontology_term=GO:0016491,GO:0016651;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016628808.1;locus_tag=SNF32_05560;product=Gfo/Idh/MocA family oxidoreductase;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank gene 77869 78378 . - . ID=gene-SNF32_05565;Name=SNF32_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05565 JAXGFV010000007.1 Protein Homology CDS 77869 78378 . - 0 ID=cds-MDY4307030.1;Parent=gene-SNF32_05565;Dbxref=NCBI_GP:MDY4307030.1;Name=MDY4307030.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023156.3;locus_tag=SNF32_05565;product=hypothetical protein;protein_id=MDY4307030.1;transl_table=11 JAXGFV010000007.1 Genbank gene 78375 78662 . - . ID=gene-SNF32_05570;Name=SNF32_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05570 JAXGFV010000007.1 Protein Homology CDS 78375 78662 . - 0 ID=cds-MDY4307031.1;Parent=gene-SNF32_05570;Dbxref=NCBI_GP:MDY4307031.1;Name=MDY4307031.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017856.3;locus_tag=SNF32_05570;product=aromatic acid exporter family protein;protein_id=MDY4307031.1;transl_table=11 JAXGFV010000007.1 Genbank gene 78548 78832 . - . ID=gene-SNF32_05575;Name=SNF32_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05575 JAXGFV010000007.1 Protein Homology CDS 78548 78832 . - 0 ID=cds-MDY4307032.1;Parent=gene-SNF32_05575;Dbxref=NCBI_GP:MDY4307032.1;Name=MDY4307032.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017856.3;locus_tag=SNF32_05575;product=aromatic acid exporter family protein;protein_id=MDY4307032.1;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 78942 79534 . + . ID=gene-SNF32_05580;Name=SNF32_05580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05580;pseudo=true JAXGFV010000007.1 Protein Homology CDS 78942 79534 . + 0 ID=cds-SNF32_05580;Parent=gene-SNF32_05580;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003127183.1;locus_tag=SNF32_05580;product=FUSC family protein;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 79584 81063 . - . ID=gene-SNF32_05585;Name=SNF32_05585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05585;pseudo=true JAXGFV010000007.1 Protein Homology CDS 79584 81063 . - 0 ID=cds-SNF32_05585;Parent=gene-SNF32_05585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723963.1;locus_tag=SNF32_05585;product=flotillin family protein;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 81077 81599 . - . ID=gene-SNF32_05590;Name=SNF32_05590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05590;pseudo=true JAXGFV010000007.1 Protein Homology CDS 81077 81599 . - 0 ID=cds-SNF32_05590;Parent=gene-SNF32_05590;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016176774.1;locus_tag=SNF32_05590;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 81797 82536 . + . ID=gene-SNF32_05595;Name=SNF32_05595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05595;pseudo=true JAXGFV010000007.1 Protein Homology CDS 81797 82536 . + 0 ID=cds-SNF32_05595;Parent=gene-SNF32_05595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723962.1;locus_tag=SNF32_05595;product=DNA/RNA non-specific endonuclease;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank gene 82546 82860 . + . ID=gene-SNF32_05600;Name=SNF32_05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05600 JAXGFV010000007.1 GeneMarkS-2+ CDS 82546 82860 . + 0 ID=cds-MDY4307033.1;Parent=gene-SNF32_05600;Dbxref=NCBI_GP:MDY4307033.1;Name=MDY4307033.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05600;product=hypothetical protein;protein_id=MDY4307033.1;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 83160 85746 . - . ID=gene-SNF32_05605;Name=SNF32_05605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05605;pseudo=true JAXGFV010000007.1 Protein Homology CDS 83160 85746 . - 0 ID=cds-SNF32_05605;Parent=gene-SNF32_05605;Note=frameshifted;Ontology_term=GO:0005215,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723960.1;locus_tag=SNF32_05605;product=HAD-IC family P-type ATPase;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 85908 86596 . + . ID=gene-SNF32_05610;Name=SNF32_05610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05610;pseudo=true JAXGFV010000007.1 Protein Homology CDS 85908 86596 . + 0 ID=cds-SNF32_05610;Parent=gene-SNF32_05610;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024803.3;locus_tag=SNF32_05610;product=MerR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 86787 87932 . - . ID=gene-SNF32_05615;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=pseudogene;locus_tag=SNF32_05615;pseudo=true JAXGFV010000007.1 Protein Homology CDS 86787 87932 . - 0 ID=cds-SNF32_05615;Parent=gene-SNF32_05615;Note=frameshifted;Ontology_term=GO:0006040,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=amino sugar metabolic process|0006040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016176784.1;locus_tag=SNF32_05615;product=N-acetylglucosamine-6-phosphate deacetylase;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 88015 88840 . - . ID=gene-SNF32_05620;Name=SNF32_05620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05620;pseudo=true JAXGFV010000007.1 Protein Homology CDS 88015 88840 . - 0 ID=cds-SNF32_05620;Parent=gene-SNF32_05620;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002339389.1;locus_tag=SNF32_05620;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 89273 90489 . - . ID=gene-SNF32_05625;Name=SNF32_05625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05625;pseudo=true JAXGFV010000007.1 Protein Homology CDS 89273 90489 . - 0 ID=cds-SNF32_05625;Parent=gene-SNF32_05625;Note=frameshifted;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002357817.1;locus_tag=SNF32_05625;product=pyridoxal phosphate-dependent aminotransferase;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank gene 90623 90784 . - . ID=gene-SNF32_05630;Name=SNF32_05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05630 JAXGFV010000007.1 Protein Homology CDS 90623 90784 . - 0 ID=cds-MDY4307034.1;Parent=gene-SNF32_05630;Dbxref=NCBI_GP:MDY4307034.1;Name=MDY4307034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724415.1;locus_tag=SNF32_05630;product=hypothetical protein;protein_id=MDY4307034.1;transl_table=11 JAXGFV010000007.1 Genbank gene 90849 90931 . + . ID=gene-SNF32_05635;Name=SNF32_05635;gbkey=Gene;gene_biotype=tRNA;locus_tag=SNF32_05635 JAXGFV010000007.1 tRNAscan-SE tRNA 90849 90931 . + . ID=rna-SNF32_05635;Parent=gene-SNF32_05635;anticodon=(pos:90882..90884);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_05635;product=tRNA-Leu JAXGFV010000007.1 tRNAscan-SE exon 90849 90931 . + . ID=exon-SNF32_05635-1;Parent=rna-SNF32_05635;anticodon=(pos:90882..90884);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=SNF32_05635;product=tRNA-Leu JAXGFV010000007.1 Genbank gene 91076 91351 . - . ID=gene-SNF32_05640;Name=SNF32_05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05640 JAXGFV010000007.1 Protein Homology CDS 91076 91351 . - 0 ID=cds-MDY4307035.1;Parent=gene-SNF32_05640;Dbxref=NCBI_GP:MDY4307035.1;Name=MDY4307035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005876387.1;locus_tag=SNF32_05640;product=hypothetical protein;protein_id=MDY4307035.1;transl_table=11 JAXGFV010000007.1 Genbank pseudogene 91447 92120 . - . ID=gene-SNF32_05645;Name=SNF32_05645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05645;pseudo=true JAXGFV010000007.1 Protein Homology CDS 91447 92120 . - 0 ID=cds-SNF32_05645;Parent=gene-SNF32_05645;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002318394.1;locus_tag=SNF32_05645;product=DNA-directed RNA polymerase subunit omega;pseudo=true;transl_table=11 JAXGFV010000007.1 Genbank gene 92344 92556 . + . ID=gene-SNF32_05650;Name=SNF32_05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05650 JAXGFV010000007.1 Protein Homology CDS 92344 92556 . + 0 ID=cds-MDY4307036.1;Parent=gene-SNF32_05650;Dbxref=NCBI_GP:MDY4307036.1;Name=MDY4307036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735711.1;locus_tag=SNF32_05650;product=DUF378 domain-containing protein;protein_id=MDY4307036.1;transl_table=11 ##sequence-region JAXGFV010000070.1 1 10181 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000070.1 Genbank region 1 10181 . + . ID=JAXGFV010000070.1:1..10181;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000070.1 Genbank gene 13 459 . - . ID=gene-SNF32_15760;Name=SNF32_15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15760 JAXGFV010000070.1 Protein Homology CDS 13 459 . - 0 ID=cds-MDY4308060.1;Parent=gene-SNF32_15760;Dbxref=NCBI_GP:MDY4308060.1;Name=MDY4308060.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022200.3;locus_tag=SNF32_15760;product=SIS domain-containing protein;protein_id=MDY4308060.1;transl_table=11 JAXGFV010000070.1 Genbank gene 393 620 . - . ID=gene-SNF32_15765;Name=SNF32_15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15765 JAXGFV010000070.1 Protein Homology CDS 393 620 . - 0 ID=cds-MDY4308061.1;Parent=gene-SNF32_15765;Dbxref=NCBI_GP:MDY4308061.1;Name=MDY4308061.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013577.3;locus_tag=SNF32_15765;product=hypothetical protein;protein_id=MDY4308061.1;transl_table=11 JAXGFV010000070.1 Genbank gene 917 1066 . - . ID=gene-SNF32_15770;Name=SNF32_15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15770 JAXGFV010000070.1 GeneMarkS-2+ CDS 917 1066 . - 0 ID=cds-MDY4308062.1;Parent=gene-SNF32_15770;Dbxref=NCBI_GP:MDY4308062.1;Name=MDY4308062.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15770;product=hypothetical protein;protein_id=MDY4308062.1;transl_table=11 JAXGFV010000070.1 Genbank pseudogene 1404 2957 . + . ID=gene-SNF32_15775;Name=SNF32_15775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15775;pseudo=true JAXGFV010000070.1 Protein Homology CDS 1404 2957 . + 0 ID=cds-SNF32_15775;Parent=gene-SNF32_15775;Note=frameshifted;Ontology_term=GO:0015144;gbkey=CDS;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018381048.1;locus_tag=SNF32_15775;product=alpha-glucoside-specific PTS transporter subunit IIBC;pseudo=true;transl_table=11 JAXGFV010000070.1 Genbank pseudogene 3036 4298 . + . ID=gene-SNF32_15780;Name=SNF32_15780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15780;pseudo=true JAXGFV010000070.1 Protein Homology CDS 3036 4298 . + 0 ID=cds-SNF32_15780;Parent=gene-SNF32_15780;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008379332.1;locus_tag=SNF32_15780;product=6-phospho-alpha-glucosidase;pseudo=true;transl_table=11 JAXGFV010000070.1 Genbank gene 5162 5311 . + . ID=gene-SNF32_15785;Name=SNF32_15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15785 JAXGFV010000070.1 GeneMarkS-2+ CDS 5162 5311 . + 0 ID=cds-MDY4308063.1;Parent=gene-SNF32_15785;Dbxref=NCBI_GP:MDY4308063.1;Name=MDY4308063.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15785;product=hypothetical protein;protein_id=MDY4308063.1;transl_table=11 JAXGFV010000070.1 Genbank gene 5308 5637 . + . ID=gene-SNF32_15790;Name=SNF32_15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15790 JAXGFV010000070.1 GeneMarkS-2+ CDS 5308 5637 . + 0 ID=cds-MDY4308064.1;Parent=gene-SNF32_15790;Dbxref=NCBI_GP:MDY4308064.1;Name=MDY4308064.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15790;product=hypothetical protein;protein_id=MDY4308064.1;transl_table=11 JAXGFV010000070.1 Genbank gene 5604 5879 . + . ID=gene-SNF32_15795;Name=SNF32_15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15795 JAXGFV010000070.1 Protein Homology CDS 5604 5879 . + 0 ID=cds-MDY4308065.1;Parent=gene-SNF32_15795;Dbxref=NCBI_GP:MDY4308065.1;Name=MDY4308065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015510244.1;locus_tag=SNF32_15795;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=MDY4308065.1;transl_table=11 JAXGFV010000070.1 Genbank gene 5982 6137 . + . ID=gene-SNF32_15800;Name=SNF32_15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15800 JAXGFV010000070.1 Protein Homology CDS 5982 6137 . + 0 ID=cds-MDY4308066.1;Parent=gene-SNF32_15800;Dbxref=NCBI_GP:MDY4308066.1;Name=MDY4308066.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014505.3;locus_tag=SNF32_15800;product=hypothetical protein;protein_id=MDY4308066.1;transl_table=11 JAXGFV010000070.1 Genbank pseudogene 6343 8455 . - . ID=gene-SNF32_15805;Name=SNF32_15805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15805;pseudo=true JAXGFV010000070.1 Protein Homology CDS 6343 8455 . - 0 ID=cds-SNF32_15805;Parent=gene-SNF32_15805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736357.1;locus_tag=SNF32_15805;product=NlpC/P60 family protein;pseudo=true;transl_table=11 JAXGFV010000070.1 Genbank pseudogene 8870 9895 . - . ID=gene-SNF32_15810;Name=SNF32_15810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15810;pseudo=true JAXGFV010000070.1 Protein Homology CDS 8870 9895 . - 0 ID=cds-SNF32_15810;Parent=gene-SNF32_15810;Note=frameshifted;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736356.1;locus_tag=SNF32_15810;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000071.1 1 9645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000071.1 Genbank region 1 9645 . + . ID=JAXGFV010000071.1:1..9645;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000071.1 Genbank pseudogene 186 607 . - . ID=gene-SNF32_15815;Name=SNF32_15815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15815;pseudo=true JAXGFV010000071.1 Protein Homology CDS 186 607 . - 0 ID=cds-SNF32_15815;Parent=gene-SNF32_15815;Note=frameshifted;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723792.1;locus_tag=SNF32_15815;product=F0F1 ATP synthase subunit epsilon;pseudo=true;transl_table=11 JAXGFV010000071.1 Genbank gene 629 2026 . - . ID=gene-SNF32_15820;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=SNF32_15820 JAXGFV010000071.1 Protein Homology CDS 629 2026 . - 0 ID=cds-MDY4308067.1;Parent=gene-SNF32_15820;Dbxref=NCBI_GP:MDY4308067.1;Name=MDY4308067.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016251817.1;locus_tag=SNF32_15820;product=F0F1 ATP synthase subunit beta;protein_id=MDY4308067.1;transl_table=11 JAXGFV010000071.1 Genbank pseudogene 2048 2949 . - . ID=gene-SNF32_15825;Name=SNF32_15825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15825;pseudo=true JAXGFV010000071.1 Protein Homology CDS 2048 2949 . - 0 ID=cds-SNF32_15825;Parent=gene-SNF32_15825;Note=frameshifted;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016623451.1;locus_tag=SNF32_15825;product=F0F1 ATP synthase subunit gamma;pseudo=true;transl_table=11 JAXGFV010000071.1 Genbank pseudogene 2963 4516 . - . ID=gene-SNF32_15830;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=pseudogene;locus_tag=SNF32_15830;pseudo=true JAXGFV010000071.1 Protein Homology CDS 2963 4516 . - 0 ID=cds-SNF32_15830;Parent=gene-SNF32_15830;Note=frameshifted;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005878464.1;locus_tag=SNF32_15830;product=F0F1 ATP synthase subunit alpha;pseudo=true;transl_table=11 JAXGFV010000071.1 Genbank gene 4539 5081 . - . ID=gene-SNF32_15835;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=SNF32_15835 JAXGFV010000071.1 Protein Homology CDS 4539 5081 . - 0 ID=cds-MDY4308068.1;Parent=gene-SNF32_15835;Dbxref=NCBI_GP:MDY4308068.1;Name=MDY4308068.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpH;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010752517.1;locus_tag=SNF32_15835;product=ATP synthase F1 subunit delta;protein_id=MDY4308068.1;transl_table=11 JAXGFV010000071.1 Genbank pseudogene 5068 5590 . - . ID=gene-SNF32_15840;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=pseudogene;locus_tag=SNF32_15840;pseudo=true JAXGFV010000071.1 Protein Homology CDS 5068 5590 . - 0 ID=cds-SNF32_15840;Parent=gene-SNF32_15840;Note=frameshifted;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpF;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734887.1;locus_tag=SNF32_15840;product=F0F1 ATP synthase subunit B;pseudo=true;transl_table=11 JAXGFV010000071.1 Genbank pseudogene 5701 5904 . - . ID=gene-SNF32_15845;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=pseudogene;locus_tag=SNF32_15845;pseudo=true JAXGFV010000071.1 Protein Homology CDS 5701 5904 . - 0 ID=cds-SNF32_15845;Parent=gene-SNF32_15845;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015986,GO:0046933,GO:0000276,GO:0045263,GO:0045264;gbkey=CDS;gene=atpE;go_component=mitochondrial proton-transporting ATP synthase complex%2C coupling factor F(o)|0000276||IEA,proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA,plasma membrane proton-transporting ATP synthase complex%2C coupling factor F(o)|0045264||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010752519.1;locus_tag=SNF32_15845;product=ATP synthase F0 subunit C;pseudo=true;transl_table=11 JAXGFV010000071.1 Genbank pseudogene 5954 6672 . - . ID=gene-SNF32_15850;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=pseudogene;locus_tag=SNF32_15850;pseudo=true JAXGFV010000071.1 Protein Homology CDS 5954 6672 . - 0 ID=cds-SNF32_15850;Parent=gene-SNF32_15850;Note=frameshifted;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpB;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734885.1;locus_tag=SNF32_15850;product=F0F1 ATP synthase subunit A;pseudo=true;transl_table=11 JAXGFV010000071.1 Genbank pseudogene 6927 7433 . - . ID=gene-SNF32_15855;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=pseudogene;locus_tag=SNF32_15855;pseudo=true JAXGFV010000071.1 Protein Homology CDS 6927 7433 . - 0 ID=cds-SNF32_15855;Parent=gene-SNF32_15855;Note=frameshifted;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010763287.1;locus_tag=SNF32_15855;product=SsrA-binding protein SmpB;pseudo=true;transl_table=11 JAXGFV010000071.1 Genbank pseudogene 7409 9645 . - . ID=gene-SNF32_15860;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=pseudogene;locus_tag=SNF32_15860;pseudo=true JAXGFV010000071.1 Protein Homology CDS 7409 9645 . - 0 ID=cds-SNF32_15860;Parent=gene-SNF32_15860;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006401,GO:0008997;gbkey=CDS;gene=rnr;go_function=ribonuclease R activity|0008997||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002414171.1;locus_tag=SNF32_15860;product=ribonuclease R;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000072.1 1 8838 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000072.1 Genbank region 1 8838 . + . ID=JAXGFV010000072.1:1..8838;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000072.1 Genbank gene 333 683 . - . ID=gene-SNF32_15865;Name=SNF32_15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15865 JAXGFV010000072.1 Protein Homology CDS 333 683 . - 0 ID=cds-MDY4308069.1;Parent=gene-SNF32_15865;Dbxref=NCBI_GP:MDY4308069.1;Name=MDY4308069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016612408.1;locus_tag=SNF32_15865;product=hypothetical protein;protein_id=MDY4308069.1;transl_table=11 JAXGFV010000072.1 Genbank gene 704 1642 . - . ID=gene-SNF32_15870;Name=SNF32_15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15870 JAXGFV010000072.1 GeneMarkS-2+ CDS 704 1642 . - 0 ID=cds-MDY4308070.1;Parent=gene-SNF32_15870;Dbxref=NCBI_GP:MDY4308070.1;Name=MDY4308070.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15870;product=hypothetical protein;protein_id=MDY4308070.1;transl_table=11 JAXGFV010000072.1 Genbank pseudogene 1762 1851 . - . ID=gene-SNF32_15875;Name=SNF32_15875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15875;pseudo=true JAXGFV010000072.1 Protein Homology CDS 1762 1851 . - 0 ID=cds-SNF32_15875;Parent=gene-SNF32_15875;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016901.3;locus_tag=SNF32_15875;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000072.1 Genbank gene 1857 2180 . - . ID=gene-SNF32_15880;Name=SNF32_15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15880 JAXGFV010000072.1 Protein Homology CDS 1857 2180 . - 0 ID=cds-MDY4308071.1;Parent=gene-SNF32_15880;Dbxref=NCBI_GP:MDY4308071.1;Name=MDY4308071.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019884.3;locus_tag=SNF32_15880;product=HTH domain-containing protein;protein_id=MDY4308071.1;transl_table=11 JAXGFV010000072.1 Genbank gene 2232 2588 . - . ID=gene-SNF32_15885;Name=SNF32_15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15885 JAXGFV010000072.1 GeneMarkS-2+ CDS 2232 2588 . - 0 ID=cds-MDY4308072.1;Parent=gene-SNF32_15885;Dbxref=NCBI_GP:MDY4308072.1;Name=MDY4308072.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15885;product=hypothetical protein;protein_id=MDY4308072.1;transl_table=11 JAXGFV010000072.1 Genbank gene 3403 4209 . - . ID=gene-SNF32_15890;Name=SNF32_15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15890 JAXGFV010000072.1 Protein Homology CDS 3403 4209 . - 0 ID=cds-MDY4308073.1;Parent=gene-SNF32_15890;Dbxref=NCBI_GP:MDY4308073.1;Name=MDY4308073.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025108.3;locus_tag=SNF32_15890;product=WxL domain-containing protein;protein_id=MDY4308073.1;transl_table=11 JAXGFV010000072.1 Genbank gene 4203 4664 . - . ID=gene-SNF32_15895;Name=SNF32_15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15895 JAXGFV010000072.1 Protein Homology CDS 4203 4664 . - 0 ID=cds-MDY4308074.1;Parent=gene-SNF32_15895;Dbxref=NCBI_GP:MDY4308074.1;Name=MDY4308074.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039835.2;locus_tag=SNF32_15895;product=hypothetical protein;protein_id=MDY4308074.1;transl_table=11 JAXGFV010000072.1 Genbank gene 4793 5989 . - . ID=gene-SNF32_15900;Name=SNF32_15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15900 JAXGFV010000072.1 Protein Homology CDS 4793 5989 . - 0 ID=cds-MDY4308075.1;Parent=gene-SNF32_15900;Dbxref=NCBI_GP:MDY4308075.1;Name=MDY4308075.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042900.1;locus_tag=SNF32_15900;product=pectate lyase-like adhesive domain-containing protein;protein_id=MDY4308075.1;transl_table=11 JAXGFV010000072.1 Genbank gene 6037 7107 . - . ID=gene-SNF32_15905;Name=SNF32_15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15905 JAXGFV010000072.1 Protein Homology CDS 6037 7107 . - 0 ID=cds-MDY4308076.1;Parent=gene-SNF32_15905;Dbxref=NCBI_GP:MDY4308076.1;Name=MDY4308076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016621809.1;locus_tag=SNF32_15905;product=DUF916 and DUF3324 domain-containing protein;protein_id=MDY4308076.1;transl_table=11 JAXGFV010000072.1 Genbank pseudogene 7149 7978 . - . ID=gene-SNF32_15910;Name=SNF32_15910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15910;pseudo=true JAXGFV010000072.1 Protein Homology CDS 7149 7978 . - 0 ID=cds-SNF32_15910;Parent=gene-SNF32_15910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723490.1;locus_tag=SNF32_15910;product=WxL domain-containing protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000073.1 1 8265 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000073.1 Genbank region 1 8265 . + . ID=JAXGFV010000073.1:1..8265;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000073.1 Genbank pseudogene 1 780 . - . ID=gene-SNF32_15915;Name=SNF32_15915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15915;pseudo=true JAXGFV010000073.1 Protein Homology CDS 1 780 . - 0 ID=cds-SNF32_15915;Parent=gene-SNF32_15915;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723601.1;locus_tag=SNF32_15915;product=LTA synthase family protein;pseudo=true;transl_table=11 JAXGFV010000073.1 Genbank pseudogene 1033 2009 . - . ID=gene-SNF32_15920;Name=SNF32_15920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15920;pseudo=true JAXGFV010000073.1 Protein Homology CDS 1033 2009 . - 0 ID=cds-SNF32_15920;Parent=gene-SNF32_15920;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723600.1;locus_tag=SNF32_15920;product=glycoside hydrolase family 43 protein;pseudo=true;transl_table=11 JAXGFV010000073.1 Genbank pseudogene 2007 3523 . - . ID=gene-SNF32_15925;Name=SNF32_15925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15925;pseudo=true JAXGFV010000073.1 Protein Homology CDS 2007 3523 . - 0 ID=cds-SNF32_15925;Parent=gene-SNF32_15925;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0046373,GO:0046556;gbkey=CDS;go_function=alpha-L-arabinofuranosidase activity|0046556||IEA;go_process=L-arabinose metabolic process|0046373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002325387.1;locus_tag=SNF32_15925;product=alpha-L-arabinofuranosidase C-terminal domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000073.1 Genbank gene 3520 3840 . - . ID=gene-SNF32_15930;Name=SNF32_15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15930 JAXGFV010000073.1 GeneMarkS-2+ CDS 3520 3840 . - 0 ID=cds-MDY4308077.1;Parent=gene-SNF32_15930;Dbxref=NCBI_GP:MDY4308077.1;Name=MDY4308077.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_15930;product=hypothetical protein;protein_id=MDY4308077.1;transl_table=11 JAXGFV010000073.1 Genbank gene 3876 4094 . - . ID=gene-SNF32_15935;Name=SNF32_15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15935 JAXGFV010000073.1 Protein Homology CDS 3876 4094 . - 0 ID=cds-MDY4308078.1;Parent=gene-SNF32_15935;Dbxref=NCBI_GP:MDY4308078.1;Name=MDY4308078.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016726.3;locus_tag=SNF32_15935;product=DUF624 domain-containing protein;protein_id=MDY4308078.1;transl_table=11 JAXGFV010000073.1 Genbank pseudogene 4099 4960 . - . ID=gene-SNF32_15940;Name=SNF32_15940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15940;pseudo=true JAXGFV010000073.1 Protein Homology CDS 4099 4960 . - 0 ID=cds-SNF32_15940;Parent=gene-SNF32_15940;Note=frameshifted;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736672.1;locus_tag=SNF32_15940;product=carbohydrate ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000073.1 Genbank pseudogene 4975 5870 . - . ID=gene-SNF32_15945;Name=SNF32_15945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15945;pseudo=true JAXGFV010000073.1 Protein Homology CDS 4975 5870 . - 0 ID=cds-SNF32_15945;Parent=gene-SNF32_15945;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287294.1;locus_tag=SNF32_15945;product=sugar ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000073.1 Genbank pseudogene 6085 7333 . - . ID=gene-SNF32_15950;Name=SNF32_15950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15950;pseudo=true JAXGFV010000073.1 Protein Homology CDS 6085 7333 . - 0 ID=cds-SNF32_15950;Parent=gene-SNF32_15950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287295.1;locus_tag=SNF32_15950;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 JAXGFV010000073.1 Genbank pseudogene 7364 8265 . - . ID=gene-SNF32_15955;Name=SNF32_15955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15955;pseudo=true JAXGFV010000073.1 Protein Homology CDS 7364 8265 . - 1 ID=cds-SNF32_15955;Parent=gene-SNF32_15955;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0046373,GO:0046556;gbkey=CDS;go_function=alpha-L-arabinofuranosidase activity|0046556||IEA;go_process=L-arabinose metabolic process|0046373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736675.1;locus_tag=SNF32_15955;product=alpha-L-arabinofuranosidase C-terminal domain-containing protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000074.1 1 7857 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000074.1 Genbank region 1 7857 . + . ID=JAXGFV010000074.1:1..7857;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000074.1 Genbank pseudogene 104 1052 . - . ID=gene-SNF32_15960;Name=menA;gbkey=Gene;gene=menA;gene_biotype=pseudogene;locus_tag=SNF32_15960;pseudo=true JAXGFV010000074.1 Protein Homology CDS 104 1052 . - 0 ID=cds-SNF32_15960;Parent=gene-SNF32_15960;Note=frameshifted;Ontology_term=GO:0004659;gbkey=CDS;gene=menA;go_function=prenyltransferase activity|0004659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328810.1;locus_tag=SNF32_15960;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;pseudo=true;transl_table=11 JAXGFV010000074.1 Genbank gene 1065 2159 . - . ID=gene-SNF32_15965;Name=SNF32_15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15965 JAXGFV010000074.1 Protein Homology CDS 1065 2159 . - 0 ID=cds-MDY4308079.1;Parent=gene-SNF32_15965;Dbxref=NCBI_GP:MDY4308079.1;Name=MDY4308079.1;Ontology_term=GO:0017013,GO:0016740,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transferase activity|0016740||IEA,metal ion binding|0046872||IEA;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010733914.1;locus_tag=SNF32_15965;product=FAD:protein FMN transferase;protein_id=MDY4308079.1;transl_table=11 JAXGFV010000074.1 Genbank pseudogene 2392 3329 . - . ID=gene-SNF32_15970;Name=pplA;gbkey=Gene;gene=pplA;gene_biotype=pseudogene;locus_tag=SNF32_15970;pseudo=true JAXGFV010000074.1 Protein Homology CDS 2392 3329 . - 0 ID=cds-SNF32_15970;Parent=gene-SNF32_15970;Note=frameshifted;gbkey=CDS;gene=pplA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002367507.1;locus_tag=SNF32_15970;product=extracellular electron transfer flavoprotein PplA;pseudo=true;transl_table=11 JAXGFV010000074.1 Genbank pseudogene 3632 5560 . + . ID=gene-SNF32_15975;Name=SNF32_15975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15975;pseudo=true JAXGFV010000074.1 Protein Homology CDS 3632 5560 . + 0 ID=cds-SNF32_15975;Parent=gene-SNF32_15975;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010733916.1;locus_tag=SNF32_15975;product=NAD(P)/FAD-dependent oxidoreductase;pseudo=true;transl_table=11 JAXGFV010000074.1 Genbank pseudogene 5803 6212 . + . ID=gene-SNF32_15980;Name=SNF32_15980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15980;pseudo=true JAXGFV010000074.1 Protein Homology CDS 5803 6212 . + 0 ID=cds-SNF32_15980;Parent=gene-SNF32_15980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010750057.1;locus_tag=SNF32_15980;product=NusG domain II-containing protein;pseudo=true;transl_table=11 JAXGFV010000074.1 Genbank gene 6242 6814 . + . ID=gene-SNF32_15985;Name=SNF32_15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15985 JAXGFV010000074.1 Protein Homology CDS 6242 6814 . + 0 ID=cds-MDY4308080.1;Parent=gene-SNF32_15985;Dbxref=NCBI_GP:MDY4308080.1;Name=MDY4308080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010720692.1;locus_tag=SNF32_15985;product=Gx transporter family protein;protein_id=MDY4308080.1;transl_table=11 JAXGFV010000074.1 Genbank pseudogene 6811 7796 . + . ID=gene-SNF32_15990;Name=SNF32_15990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_15990;pseudo=true JAXGFV010000074.1 Protein Homology CDS 6811 7796 . + 0 ID=cds-SNF32_15990;Parent=gene-SNF32_15990;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002310571.1;locus_tag=SNF32_15990;product=polyprenyl synthetase family protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000075.1 1 7807 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000075.1 Genbank region 1 7807 . + . ID=JAXGFV010000075.1:1..7807;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000075.1 Genbank gene 249 431 . + . ID=gene-SNF32_15995;Name=SNF32_15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_15995 JAXGFV010000075.1 Protein Homology CDS 249 431 . + 0 ID=cds-MDY4308081.1;Parent=gene-SNF32_15995;Dbxref=NCBI_GP:MDY4308081.1;Name=MDY4308081.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026008.3;locus_tag=SNF32_15995;product=Arm DNA-binding domain-containing protein;protein_id=MDY4308081.1;transl_table=11 JAXGFV010000075.1 Genbank gene 407 757 . + . ID=gene-SNF32_16000;Name=SNF32_16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16000 JAXGFV010000075.1 Protein Homology CDS 407 757 . + 0 ID=cds-MDY4308082.1;Parent=gene-SNF32_16000;Dbxref=NCBI_GP:MDY4308082.1;Name=MDY4308082.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026010.3;locus_tag=SNF32_16000;product=N-terminal phage integrase SAM-like domain-containing protein;protein_id=MDY4308082.1;transl_table=11 JAXGFV010000075.1 Genbank gene 786 1316 . + . ID=gene-SNF32_16005;Name=SNF32_16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16005 JAXGFV010000075.1 Protein Homology CDS 786 1316 . + 0 ID=cds-MDY4308083.1;Parent=gene-SNF32_16005;Dbxref=NCBI_GP:MDY4308083.1;Name=MDY4308083.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.3;locus_tag=SNF32_16005;product=site-specific integrase;protein_id=MDY4308083.1;transl_table=11 JAXGFV010000075.1 Genbank gene 1431 1798 . - . ID=gene-SNF32_16010;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=SNF32_16010 JAXGFV010000075.1 cmsearch tmRNA 1431 1798 . - . ID=rna-SNF32_16010;Parent=gene-SNF32_16010;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=SNF32_16010;product=transfer-messenger RNA JAXGFV010000075.1 cmsearch exon 1431 1798 . - . ID=exon-SNF32_16010-1;Parent=rna-SNF32_16010;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=SNF32_16010;product=transfer-messenger RNA JAXGFV010000075.1 Genbank gene 2025 2312 . - . ID=gene-SNF32_16015;Name=SNF32_16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16015 JAXGFV010000075.1 Protein Homology CDS 2025 2312 . - 0 ID=cds-MDY4308084.1;Parent=gene-SNF32_16015;Dbxref=NCBI_GP:MDY4308084.1;Name=MDY4308084.1;Ontology_term=GO:0004497;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735081.1;locus_tag=SNF32_16015;product=putative quinol monooxygenase;protein_id=MDY4308084.1;transl_table=11 JAXGFV010000075.1 Genbank pseudogene 2350 2969 . - . ID=gene-SNF32_16020;Name=SNF32_16020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16020;pseudo=true JAXGFV010000075.1 Protein Homology CDS 2350 2969 . - 0 ID=cds-SNF32_16020;Parent=gene-SNF32_16020;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019299635.1;locus_tag=SNF32_16020;product=nitroreductase family protein;pseudo=true;transl_table=11 JAXGFV010000075.1 Genbank pseudogene 3001 3404 . - . ID=gene-SNF32_16025;Name=SNF32_16025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16025;pseudo=true JAXGFV010000075.1 Protein Homology CDS 3001 3404 . - 0 ID=cds-SNF32_16025;Parent=gene-SNF32_16025;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735079.1;locus_tag=SNF32_16025;product=MarR family winged helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000075.1 Genbank gene 3690 3953 . - . ID=gene-SNF32_16030;Name=SNF32_16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16030 JAXGFV010000075.1 Protein Homology CDS 3690 3953 . - 0 ID=cds-MDY4308085.1;Parent=gene-SNF32_16030;Dbxref=NCBI_GP:MDY4308085.1;Name=MDY4308085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724432.1;locus_tag=SNF32_16030;product=hypothetical protein;protein_id=MDY4308085.1;transl_table=11 JAXGFV010000075.1 Genbank pseudogene 4093 4580 . - . ID=gene-SNF32_16035;Name=SNF32_16035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16035;pseudo=true JAXGFV010000075.1 Protein Homology CDS 4093 4580 . - 0 ID=cds-SNF32_16035;Parent=gene-SNF32_16035;Note=frameshifted;Ontology_term=GO:0005515,GO:0033745;gbkey=CDS;go_function=protein binding|0005515||IEA,L-methionine-(R)-S-oxide reductase activity|0033745||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735077.1;locus_tag=SNF32_16035;product=GAF domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000075.1 Genbank gene 4666 5373 . - . ID=gene-SNF32_16040;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=SNF32_16040 JAXGFV010000075.1 Protein Homology CDS 4666 5373 . - 0 ID=cds-MDY4308086.1;Parent=gene-SNF32_16040;Dbxref=NCBI_GP:MDY4308086.1;Name=MDY4308086.1;Ontology_term=GO:0006113,GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=fermentation|0006113||IEA,acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002333671.1;locus_tag=SNF32_16040;product=acetolactate decarboxylase;protein_id=MDY4308086.1;transl_table=11 JAXGFV010000075.1 Genbank gene 5639 5911 . - . ID=gene-SNF32_16045;Name=SNF32_16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16045 JAXGFV010000075.1 Protein Homology CDS 5639 5911 . - 0 ID=cds-MDY4308087.1;Parent=gene-SNF32_16045;Dbxref=NCBI_GP:MDY4308087.1;Name=MDY4308087.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014691.3;locus_tag=SNF32_16045;product=Fic family protein;protein_id=MDY4308087.1;transl_table=11 JAXGFV010000075.1 Genbank gene 5963 6088 . - . ID=gene-SNF32_16050;Name=SNF32_16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16050 JAXGFV010000075.1 GeneMarkS-2+ CDS 5963 6088 . - 0 ID=cds-MDY4308088.1;Parent=gene-SNF32_16050;Dbxref=NCBI_GP:MDY4308088.1;Name=MDY4308088.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16050;product=hypothetical protein;protein_id=MDY4308088.1;transl_table=11 JAXGFV010000075.1 Genbank gene 6184 6360 . - . ID=gene-SNF32_16055;Name=SNF32_16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16055 JAXGFV010000075.1 Protein Homology CDS 6184 6360 . - 0 ID=cds-MDY4308089.1;Parent=gene-SNF32_16055;Dbxref=NCBI_GP:MDY4308089.1;Name=MDY4308089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001866213.1;locus_tag=SNF32_16055;product=hypothetical protein;protein_id=MDY4308089.1;transl_table=11 JAXGFV010000075.1 Genbank pseudogene 6679 7797 . - . ID=gene-SNF32_16060;Name=SNF32_16060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16060;pseudo=true JAXGFV010000075.1 Protein Homology CDS 6679 7797 . - 0 ID=cds-SNF32_16060;Parent=gene-SNF32_16060;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611172.1;locus_tag=SNF32_16060;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000076.1 1 7692 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000076.1 Genbank region 1 7692 . + . ID=JAXGFV010000076.1:1..7692;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000076.1 Genbank gene 1 642 . - . ID=gene-SNF32_16065;Name=SNF32_16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16065;partial=true;start_range=.,1 JAXGFV010000076.1 Protein Homology CDS 1 642 . - 0 ID=cds-MDY4308090.1;Parent=gene-SNF32_16065;Dbxref=NCBI_GP:MDY4308090.1;Name=MDY4308090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008381815.1;locus_tag=SNF32_16065;partial=true;product=DUF916 domain-containing protein;protein_id=MDY4308090.1;start_range=.,1;transl_table=11 JAXGFV010000076.1 Genbank gene 755 1582 . - . ID=gene-SNF32_16070;Name=SNF32_16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16070 JAXGFV010000076.1 Protein Homology CDS 755 1582 . - 0 ID=cds-MDY4308091.1;Parent=gene-SNF32_16070;Dbxref=NCBI_GP:MDY4308091.1;Name=MDY4308091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723490.1;locus_tag=SNF32_16070;product=WxL domain-containing protein;protein_id=MDY4308091.1;transl_table=11 JAXGFV010000076.1 Genbank gene 1579 1902 . - . ID=gene-SNF32_16075;Name=SNF32_16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16075 JAXGFV010000076.1 GeneMarkS-2+ CDS 1579 1902 . - 0 ID=cds-MDY4308092.1;Parent=gene-SNF32_16075;Dbxref=NCBI_GP:MDY4308092.1;Name=MDY4308092.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16075;product=LPXTG cell wall anchor domain-containing protein;protein_id=MDY4308092.1;transl_table=11 JAXGFV010000076.1 Genbank gene 2553 3374 . - . ID=gene-SNF32_16080;Name=SNF32_16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16080 JAXGFV010000076.1 GeneMarkS-2+ CDS 2553 3374 . - 0 ID=cds-MDY4308093.1;Parent=gene-SNF32_16080;Dbxref=NCBI_GP:MDY4308093.1;Name=MDY4308093.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16080;product=hypothetical protein;protein_id=MDY4308093.1;transl_table=11 JAXGFV010000076.1 Genbank gene 3408 3950 . - . ID=gene-SNF32_16085;Name=SNF32_16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16085 JAXGFV010000076.1 Protein Homology CDS 3408 3950 . - 0 ID=cds-MDY4308094.1;Parent=gene-SNF32_16085;Dbxref=NCBI_GP:MDY4308094.1;Name=MDY4308094.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016901.3;locus_tag=SNF32_16085;product=helix-turn-helix domain-containing protein;protein_id=MDY4308094.1;transl_table=11 JAXGFV010000076.1 Genbank gene 4453 4785 . - . ID=gene-SNF32_16090;Name=SNF32_16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16090 JAXGFV010000076.1 GeneMarkS-2+ CDS 4453 4785 . - 0 ID=cds-MDY4308095.1;Parent=gene-SNF32_16090;Dbxref=NCBI_GP:MDY4308095.1;Name=MDY4308095.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16090;product=hypothetical protein;protein_id=MDY4308095.1;transl_table=11 ##sequence-region JAXGFV010000077.1 1 7568 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000077.1 Genbank region 1 7568 . + . ID=JAXGFV010000077.1:1..7568;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000077.1 Genbank pseudogene 1 1507 . + . ID=gene-SNF32_16095;Name=SNF32_16095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16095;pseudo=true JAXGFV010000077.1 Protein Homology CDS 1 1507 . + 0 ID=cds-SNF32_16095;Parent=gene-SNF32_16095;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016628381.1;locus_tag=SNF32_16095;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11 JAXGFV010000077.1 Genbank pseudogene 1644 2363 . - . ID=gene-SNF32_16100;Name=SNF32_16100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16100;pseudo=true JAXGFV010000077.1 Protein Homology CDS 1644 2363 . - 0 ID=cds-SNF32_16100;Parent=gene-SNF32_16100;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734240.1;locus_tag=SNF32_16100;product=HAD family hydrolase;pseudo=true;transl_table=11 JAXGFV010000077.1 Genbank pseudogene 3107 3504 . + . ID=gene-SNF32_16105;Name=spxA;gbkey=Gene;gene=spxA;gene_biotype=pseudogene;locus_tag=SNF32_16105;pseudo=true JAXGFV010000077.1 Protein Homology CDS 3107 3504 . + 0 ID=cds-SNF32_16105;Parent=gene-SNF32_16105;Note=frameshifted;Ontology_term=GO:0045892;gbkey=CDS;gene=spxA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003127030.1;locus_tag=SNF32_16105;product=transcriptional regulator SpxA;pseudo=true;transl_table=11 JAXGFV010000077.1 Genbank pseudogene 3664 4313 . + . ID=gene-SNF32_16110;Name=SNF32_16110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16110;pseudo=true JAXGFV010000077.1 Protein Homology CDS 3664 4313 . + 0 ID=cds-SNF32_16110;Parent=gene-SNF32_16110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734242.1;locus_tag=SNF32_16110;product=adaptor protein MecA;pseudo=true;transl_table=11 JAXGFV010000077.1 Genbank gene 4646 5029 . + . ID=gene-SNF32_16115;Name=SNF32_16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16115 JAXGFV010000077.1 Protein Homology CDS 4646 5029 . + 0 ID=cds-MDY4308096.1;Parent=gene-SNF32_16115;Dbxref=NCBI_GP:MDY4308096.1;Name=MDY4308096.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017832.3;locus_tag=SNF32_16115;product=competence protein CoiA family protein;protein_id=MDY4308096.1;transl_table=11 JAXGFV010000077.1 Genbank pseudogene 5552 7362 . + . ID=gene-SNF32_16120;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=pseudogene;locus_tag=SNF32_16120;pseudo=true JAXGFV010000077.1 Protein Homology CDS 5552 7362 . + 0 ID=cds-SNF32_16120;Parent=gene-SNF32_16120;Note=frameshifted;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002407235.1;locus_tag=SNF32_16120;product=oligoendopeptidase F;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000078.1 1 7399 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000078.1 Genbank region 1 7399 . + . ID=JAXGFV010000078.1:1..7399;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000078.1 Genbank pseudogene 172 542 . + . ID=gene-SNF32_16125;Name=SNF32_16125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16125;pseudo=true JAXGFV010000078.1 Protein Homology CDS 172 542 . + 0 ID=cds-SNF32_16125;Parent=gene-SNF32_16125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002329268.1;locus_tag=SNF32_16125;product=VOC family protein;pseudo=true;transl_table=11 JAXGFV010000078.1 Genbank pseudogene 736 1670 . + . ID=gene-SNF32_16130;Name=SNF32_16130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16130;pseudo=true JAXGFV010000078.1 Protein Homology CDS 736 1670 . + 0 ID=cds-SNF32_16130;Parent=gene-SNF32_16130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724463.1;locus_tag=SNF32_16130;product=rhodanese-related sulfurtransferase;pseudo=true;transl_table=11 JAXGFV010000078.1 Genbank pseudogene 1862 2594 . + . ID=gene-SNF32_16135;Name=SNF32_16135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16135;pseudo=true JAXGFV010000078.1 Protein Homology CDS 1862 2594 . + 0 ID=cds-SNF32_16135;Parent=gene-SNF32_16135;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735302.1;locus_tag=SNF32_16135;product=metallophosphoesterase;pseudo=true;transl_table=11 JAXGFV010000078.1 Genbank pseudogene 2893 5072 . + . ID=gene-SNF32_16140;Name=SNF32_16140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16140;pseudo=true JAXGFV010000078.1 Protein Homology CDS 2893 5072 . + 0 ID=cds-SNF32_16140;Parent=gene-SNF32_16140;Note=frameshifted;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735303.1;locus_tag=SNF32_16140;product=Tex family protein;pseudo=true;transl_table=11 JAXGFV010000078.1 Genbank pseudogene 5069 5559 . + . ID=gene-SNF32_16145;Name=SNF32_16145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16145;pseudo=true JAXGFV010000078.1 Protein Homology CDS 5069 5559 . + 0 ID=cds-SNF32_16145;Parent=gene-SNF32_16145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005879884.1;locus_tag=SNF32_16145;product=SprT family protein;pseudo=true;transl_table=11 JAXGFV010000078.1 Genbank gene 5591 6082 . + . ID=gene-SNF32_16150;Name=SNF32_16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16150 JAXGFV010000078.1 Protein Homology CDS 5591 6082 . + 0 ID=cds-MDY4308097.1;Parent=gene-SNF32_16150;Dbxref=NCBI_GP:MDY4308097.1;Name=MDY4308097.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014724.3;locus_tag=SNF32_16150;product=YdcF family protein;protein_id=MDY4308097.1;transl_table=11 JAXGFV010000078.1 Genbank gene 6079 6312 . + . ID=gene-SNF32_16155;Name=SNF32_16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16155 JAXGFV010000078.1 GeneMarkS-2+ CDS 6079 6312 . + 0 ID=cds-MDY4308098.1;Parent=gene-SNF32_16155;Dbxref=NCBI_GP:MDY4308098.1;Name=MDY4308098.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16155;product=hypothetical protein;protein_id=MDY4308098.1;transl_table=11 JAXGFV010000078.1 Genbank gene 6449 7399 . + . ID=gene-SNF32_16160;Name=SNF32_16160;end_range=7399,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16160;partial=true JAXGFV010000078.1 Protein Homology CDS 6449 7399 . + 0 ID=cds-MDY4308099.1;Parent=gene-SNF32_16160;Dbxref=NCBI_GP:MDY4308099.1;Name=MDY4308099.1;Ontology_term=GO:0009058,GO:0005524,GO:0016881;end_range=7399,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016624780.1;locus_tag=SNF32_16160;partial=true;product=Mur ligase domain-containing protein;protein_id=MDY4308099.1;transl_table=11 ##sequence-region JAXGFV010000079.1 1 7237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000079.1 Genbank region 1 7237 . + . ID=JAXGFV010000079.1:1..7237;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000079.1 Genbank gene 118 258 . - . ID=gene-SNF32_16165;Name=SNF32_16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16165 JAXGFV010000079.1 GeneMarkS-2+ CDS 118 258 . - 0 ID=cds-MDY4308100.1;Parent=gene-SNF32_16165;Dbxref=NCBI_GP:MDY4308100.1;Name=MDY4308100.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16165;product=hypothetical protein;protein_id=MDY4308100.1;transl_table=11 JAXGFV010000079.1 Genbank gene 390 953 . - . ID=gene-SNF32_16170;Name=SNF32_16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16170 JAXGFV010000079.1 Protein Homology CDS 390 953 . - 0 ID=cds-MDY4308101.1;Parent=gene-SNF32_16170;Dbxref=NCBI_GP:MDY4308101.1;Name=MDY4308101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724061.1;locus_tag=SNF32_16170;product=hypothetical protein;protein_id=MDY4308101.1;transl_table=11 JAXGFV010000079.1 Genbank gene 968 1426 . - . ID=gene-SNF32_16175;Name=SNF32_16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16175 JAXGFV010000079.1 Protein Homology CDS 968 1426 . - 0 ID=cds-MDY4308102.1;Parent=gene-SNF32_16175;Dbxref=NCBI_GP:MDY4308102.1;Name=MDY4308102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723655.1;locus_tag=SNF32_16175;product=hypothetical protein;protein_id=MDY4308102.1;transl_table=11 JAXGFV010000079.1 Genbank gene 1555 4476 . - . ID=gene-SNF32_16180;Name=SNF32_16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16180 JAXGFV010000079.1 Protein Homology CDS 1555 4476 . - 0 ID=cds-MDY4308103.1;Parent=gene-SNF32_16180;Dbxref=NCBI_GP:MDY4308103.1;Name=MDY4308103.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039835.2;locus_tag=SNF32_16180;product=BspA family leucine-rich repeat surface protein;protein_id=MDY4308103.1;transl_table=11 JAXGFV010000079.1 Genbank gene 4661 4951 . - . ID=gene-SNF32_16185;Name=SNF32_16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16185 JAXGFV010000079.1 GeneMarkS-2+ CDS 4661 4951 . - 0 ID=cds-MDY4308104.1;Parent=gene-SNF32_16185;Dbxref=NCBI_GP:MDY4308104.1;Name=MDY4308104.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16185;product=hypothetical protein;protein_id=MDY4308104.1;transl_table=11 JAXGFV010000079.1 Genbank gene 5415 5594 . - . ID=gene-SNF32_16190;Name=SNF32_16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16190 JAXGFV010000079.1 GeneMarkS-2+ CDS 5415 5594 . - 0 ID=cds-MDY4308105.1;Parent=gene-SNF32_16190;Dbxref=NCBI_GP:MDY4308105.1;Name=MDY4308105.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16190;product=hypothetical protein;protein_id=MDY4308105.1;transl_table=11 JAXGFV010000079.1 Genbank gene 5909 6088 . - . ID=gene-SNF32_16195;Name=SNF32_16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16195 JAXGFV010000079.1 GeneMarkS-2+ CDS 5909 6088 . - 0 ID=cds-MDY4308106.1;Parent=gene-SNF32_16195;Dbxref=NCBI_GP:MDY4308106.1;Name=MDY4308106.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16195;product=hypothetical protein;protein_id=MDY4308106.1;transl_table=11 JAXGFV010000079.1 Genbank gene 6172 6372 . - . ID=gene-SNF32_16200;Name=SNF32_16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16200 JAXGFV010000079.1 GeneMarkS-2+ CDS 6172 6372 . - 0 ID=cds-MDY4308107.1;Parent=gene-SNF32_16200;Dbxref=NCBI_GP:MDY4308107.1;Name=MDY4308107.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16200;product=hypothetical protein;protein_id=MDY4308107.1;transl_table=11 JAXGFV010000079.1 Genbank gene 6722 7132 . - . ID=gene-SNF32_16205;Name=SNF32_16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16205 JAXGFV010000079.1 Protein Homology CDS 6722 7132 . - 0 ID=cds-MDY4308108.1;Parent=gene-SNF32_16205;Dbxref=NCBI_GP:MDY4308108.1;Name=MDY4308108.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018196.3;locus_tag=SNF32_16205;product=MucBP domain-containing protein;protein_id=MDY4308108.1;transl_table=11 ##sequence-region JAXGFV010000008.1 1 87053 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000008.1 Genbank region 1 87053 . + . ID=JAXGFV010000008.1:1..87053;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000008.1 Genbank gene 1 272 . - . ID=gene-SNF32_05655;Name=SNF32_05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05655;partial=true;start_range=.,1 JAXGFV010000008.1 GeneMarkS-2+ CDS 1 272 . - 0 ID=cds-MDY4307037.1;Parent=gene-SNF32_05655;Dbxref=NCBI_GP:MDY4307037.1;Name=MDY4307037.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05655;partial=true;product=hypothetical protein;protein_id=MDY4307037.1;start_range=.,1;transl_table=11 JAXGFV010000008.1 Genbank gene 373 912 . - . ID=gene-SNF32_05660;Name=SNF32_05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05660 JAXGFV010000008.1 GeneMarkS-2+ CDS 373 912 . - 0 ID=cds-MDY4307038.1;Parent=gene-SNF32_05660;Dbxref=NCBI_GP:MDY4307038.1;Name=MDY4307038.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05660;product=hypothetical protein;protein_id=MDY4307038.1;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 1462 3164 . - . ID=gene-SNF32_05665;Name=alsS;gbkey=Gene;gene=alsS;gene_biotype=pseudogene;locus_tag=SNF32_05665;pseudo=true JAXGFV010000008.1 Protein Homology CDS 1462 3164 . - 0 ID=cds-SNF32_05665;Parent=gene-SNF32_05665;Note=frameshifted;Ontology_term=GO:0034077,GO:0000287,GO:0003984,GO:0030976;gbkey=CDS;gene=alsS;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=butanediol metabolic process|0034077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723933.1;locus_tag=SNF32_05665;product=acetolactate synthase AlsS;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 3360 3845 . - . ID=gene-SNF32_05670;Name=SNF32_05670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05670;pseudo=true JAXGFV010000008.1 Protein Homology CDS 3360 3845 . - 0 ID=cds-SNF32_05670;Parent=gene-SNF32_05670;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003635955.1;locus_tag=SNF32_05670;product=N-acetyltransferase family protein;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank gene 3943 4059 . - . ID=gene-SNF32_05675;Name=SNF32_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05675 JAXGFV010000008.1 Protein Homology CDS 3943 4059 . - 0 ID=cds-MDY4307039.1;Parent=gene-SNF32_05675;Dbxref=NCBI_GP:MDY4307039.1;Name=MDY4307039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723931.1;locus_tag=SNF32_05675;product=putative metal homeostasis protein;protein_id=MDY4307039.1;transl_table=11 JAXGFV010000008.1 Genbank gene 4095 4244 . - . ID=gene-SNF32_05680;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=SNF32_05680 JAXGFV010000008.1 Protein Homology CDS 4095 4244 . - 0 ID=cds-MDY4307040.1;Parent=gene-SNF32_05680;Dbxref=NCBI_GP:MDY4307040.1;Name=MDY4307040.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265622.1;locus_tag=SNF32_05680;product=50S ribosomal protein L33;protein_id=MDY4307040.1;transl_table=11 JAXGFV010000008.1 Genbank gene 4504 5361 . - . ID=gene-SNF32_05685;Name=SNF32_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05685 JAXGFV010000008.1 Protein Homology CDS 4504 5361 . - 0 ID=cds-MDY4307041.1;Parent=gene-SNF32_05685;Dbxref=NCBI_GP:MDY4307041.1;Name=MDY4307041.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF012931.3;locus_tag=SNF32_05685;product=family 20 glycosylhydrolase;protein_id=MDY4307041.1;transl_table=11 JAXGFV010000008.1 Genbank gene 5358 5507 . - . ID=gene-SNF32_05690;Name=SNF32_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05690 JAXGFV010000008.1 GeneMarkS-2+ CDS 5358 5507 . - 0 ID=cds-MDY4307042.1;Parent=gene-SNF32_05690;Dbxref=NCBI_GP:MDY4307042.1;Name=MDY4307042.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05690;product=hypothetical protein;protein_id=MDY4307042.1;transl_table=11 JAXGFV010000008.1 Genbank gene 5637 7037 . - . ID=gene-SNF32_05695;Name=SNF32_05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05695 JAXGFV010000008.1 Protein Homology CDS 5637 7037 . - 0 ID=cds-MDY4307043.1;Parent=gene-SNF32_05695;Dbxref=NCBI_GP:MDY4307043.1;Name=MDY4307043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735064.1;locus_tag=SNF32_05695;product=M24 family metallopeptidase;protein_id=MDY4307043.1;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 7030 7795 . - . ID=gene-SNF32_05700;Name=SNF32_05700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05700;pseudo=true JAXGFV010000008.1 Protein Homology CDS 7030 7795 . - 0 ID=cds-SNF32_05700;Parent=gene-SNF32_05700;Note=frameshifted;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735063.1;locus_tag=SNF32_05700;product=DeoR/GlpR family DNA-binding transcription regulator;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank gene 8043 8675 . - . ID=gene-SNF32_05705;Name=phnX;gbkey=Gene;gene=phnX;gene_biotype=protein_coding;locus_tag=SNF32_05705 JAXGFV010000008.1 Protein Homology CDS 8043 8675 . - 0 ID=cds-MDY4307044.1;Parent=gene-SNF32_05705;Dbxref=NCBI_GP:MDY4307044.1;Name=MDY4307044.1;Ontology_term=GO:0009636,GO:0019635,GO:0019636,GO:0019700,GO:0016827;gbkey=CDS;gene=phnX;go_function=hydrolase activity%2C acting on acid carbon-phosphorus bonds|0016827||IEA;go_process=response to toxic substance|0009636||IEA,2-aminoethylphosphonate catabolic process|0019635||IEA,phosphonoacetate metabolic process|0019636||IEA,organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: protein motif:HMM:TIGR01422.2;locus_tag=SNF32_05705;product=phosphonoacetaldehyde hydrolase;protein_id=MDY4307044.1;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 8846 9978 . - . ID=gene-SNF32_05710;Name=phnW;gbkey=Gene;gene=phnW;gene_biotype=pseudogene;locus_tag=SNF32_05710;pseudo=true JAXGFV010000008.1 Protein Homology CDS 8846 9978 . - 0 ID=cds-SNF32_05710;Parent=gene-SNF32_05710;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;gene=phnW;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724450.1;locus_tag=SNF32_05710;product=2-aminoethylphosphonate--pyruvate transaminase;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank gene 9997 10260 . - . ID=gene-SNF32_05715;Name=SNF32_05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05715 JAXGFV010000008.1 GeneMarkS-2+ CDS 9997 10260 . - 0 ID=cds-MDY4307045.1;Parent=gene-SNF32_05715;Dbxref=NCBI_GP:MDY4307045.1;Name=MDY4307045.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05715;product=hypothetical protein;protein_id=MDY4307045.1;transl_table=11 JAXGFV010000008.1 Genbank gene 10215 11645 . - . ID=gene-SNF32_05720;Name=SNF32_05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05720 JAXGFV010000008.1 Protein Homology CDS 10215 11645 . - 0 ID=cds-MDY4307046.1;Parent=gene-SNF32_05720;Dbxref=NCBI_GP:MDY4307046.1;Name=MDY4307046.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012738.3;locus_tag=SNF32_05720;product=ABC transporter permease subunit;protein_id=MDY4307046.1;transl_table=11 JAXGFV010000008.1 Genbank gene 11765 12046 . - . ID=gene-SNF32_05725;Name=SNF32_05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05725 JAXGFV010000008.1 GeneMarkS-2+ CDS 11765 12046 . - 0 ID=cds-MDY4307047.1;Parent=gene-SNF32_05725;Dbxref=NCBI_GP:MDY4307047.1;Name=MDY4307047.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05725;product=hypothetical protein;protein_id=MDY4307047.1;transl_table=11 JAXGFV010000008.1 Genbank gene 12043 12594 . - . ID=gene-SNF32_05730;Name=SNF32_05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05730 JAXGFV010000008.1 GeneMarkS-2+ CDS 12043 12594 . - 0 ID=cds-MDY4307048.1;Parent=gene-SNF32_05730;Dbxref=NCBI_GP:MDY4307048.1;Name=MDY4307048.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05730;product=hypothetical protein;protein_id=MDY4307048.1;transl_table=11 JAXGFV010000008.1 Genbank gene 12591 12794 . - . ID=gene-SNF32_05735;Name=SNF32_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05735 JAXGFV010000008.1 GeneMarkS-2+ CDS 12591 12794 . - 0 ID=cds-MDY4307049.1;Parent=gene-SNF32_05735;Dbxref=NCBI_GP:MDY4307049.1;Name=MDY4307049.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05735;product=hypothetical protein;protein_id=MDY4307049.1;transl_table=11 JAXGFV010000008.1 Genbank gene 12836 13045 . - . ID=gene-SNF32_05740;Name=SNF32_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05740 JAXGFV010000008.1 Protein Homology CDS 12836 13045 . - 0 ID=cds-MDY4307050.1;Parent=gene-SNF32_05740;Dbxref=NCBI_GP:MDY4307050.1;Name=MDY4307050.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.3;locus_tag=SNF32_05740;product=ATP-binding cassette domain-containing protein;protein_id=MDY4307050.1;transl_table=11 JAXGFV010000008.1 Genbank gene 13033 13371 . - . ID=gene-SNF32_05745;Name=SNF32_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05745 JAXGFV010000008.1 Protein Homology CDS 13033 13371 . - 0 ID=cds-MDY4307051.1;Parent=gene-SNF32_05745;Dbxref=NCBI_GP:MDY4307051.1;Name=MDY4307051.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.3;locus_tag=SNF32_05745;product=ATP-binding cassette domain-containing protein;protein_id=MDY4307051.1;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 13680 15440 . - . ID=gene-SNF32_05750;Name=SNF32_05750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05750;pseudo=true JAXGFV010000008.1 Protein Homology CDS 13680 15440 . - 0 ID=cds-SNF32_05750;Parent=gene-SNF32_05750;Note=frameshifted;Ontology_term=GO:0016114,GO:0008661;gbkey=CDS;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735057.1;locus_tag=SNF32_05750;product=1-deoxy-D-xylulose-5-phosphate synthase;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank gene 15635 15985 . - . ID=gene-SNF32_05755;Name=SNF32_05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05755 JAXGFV010000008.1 Protein Homology CDS 15635 15985 . - 0 ID=cds-MDY4307052.1;Parent=gene-SNF32_05755;Dbxref=NCBI_GP:MDY4307052.1;Name=MDY4307052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735056.1;locus_tag=SNF32_05755;product=hypothetical protein;protein_id=MDY4307052.1;transl_table=11 JAXGFV010000008.1 Genbank gene 16003 16659 . - . ID=gene-SNF32_05760;Name=SNF32_05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05760 JAXGFV010000008.1 Protein Homology CDS 16003 16659 . - 0 ID=cds-MDY4307053.1;Parent=gene-SNF32_05760;Dbxref=NCBI_GP:MDY4307053.1;Name=MDY4307053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735055.1;locus_tag=SNF32_05760;product=hypothetical protein;protein_id=MDY4307053.1;transl_table=11 JAXGFV010000008.1 Genbank gene 16719 17255 . - . ID=gene-SNF32_05765;Name=SNF32_05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05765 JAXGFV010000008.1 GeneMarkS-2+ CDS 16719 17255 . - 0 ID=cds-MDY4307054.1;Parent=gene-SNF32_05765;Dbxref=NCBI_GP:MDY4307054.1;Name=MDY4307054.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05765;product=hypothetical protein;protein_id=MDY4307054.1;transl_table=11 JAXGFV010000008.1 Genbank gene 17276 18403 . - . ID=gene-SNF32_05770;Name=SNF32_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05770 JAXGFV010000008.1 Protein Homology CDS 17276 18403 . - 0 ID=cds-MDY4307055.1;Parent=gene-SNF32_05770;Dbxref=NCBI_GP:MDY4307055.1;Name=MDY4307055.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015244.3;locus_tag=SNF32_05770;product=putative mucin/carbohydrate-binding domain-containing protein;protein_id=MDY4307055.1;transl_table=11 JAXGFV010000008.1 Genbank gene 18409 20088 . - . ID=gene-SNF32_05775;Name=SNF32_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05775 JAXGFV010000008.1 GeneMarkS-2+ CDS 18409 20088 . - 0 ID=cds-MDY4307056.1;Parent=gene-SNF32_05775;Dbxref=NCBI_GP:MDY4307056.1;Name=MDY4307056.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05775;product=hypothetical protein;protein_id=MDY4307056.1;transl_table=11 JAXGFV010000008.1 Genbank gene 20141 20572 . - . ID=gene-SNF32_05780;Name=SNF32_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05780 JAXGFV010000008.1 GeneMarkS-2+ CDS 20141 20572 . - 0 ID=cds-MDY4307057.1;Parent=gene-SNF32_05780;Dbxref=NCBI_GP:MDY4307057.1;Name=MDY4307057.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05780;product=hypothetical protein;protein_id=MDY4307057.1;transl_table=11 JAXGFV010000008.1 Genbank gene 20554 22800 . - . ID=gene-SNF32_05785;Name=SNF32_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05785 JAXGFV010000008.1 Protein Homology CDS 20554 22800 . - 0 ID=cds-MDY4307058.1;Parent=gene-SNF32_05785;Dbxref=NCBI_GP:MDY4307058.1;Name=MDY4307058.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039835.2;locus_tag=SNF32_05785;product=hypothetical protein;protein_id=MDY4307058.1;transl_table=11 JAXGFV010000008.1 Genbank gene 22854 23291 . - . ID=gene-SNF32_05790;Name=SNF32_05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05790 JAXGFV010000008.1 GeneMarkS-2+ CDS 22854 23291 . - 0 ID=cds-MDY4307059.1;Parent=gene-SNF32_05790;Dbxref=NCBI_GP:MDY4307059.1;Name=MDY4307059.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05790;product=hypothetical protein;protein_id=MDY4307059.1;transl_table=11 JAXGFV010000008.1 Genbank gene 24298 24612 . + . ID=gene-SNF32_05795;Name=SNF32_05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05795 JAXGFV010000008.1 Protein Homology CDS 24298 24612 . + 0 ID=cds-MDY4307060.1;Parent=gene-SNF32_05795;Dbxref=NCBI_GP:MDY4307060.1;Name=MDY4307060.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016901.3;locus_tag=SNF32_05795;product=helix-turn-helix domain-containing protein;protein_id=MDY4307060.1;transl_table=11 JAXGFV010000008.1 Genbank gene 24740 25057 . + . ID=gene-SNF32_05800;Name=SNF32_05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05800 JAXGFV010000008.1 GeneMarkS-2+ CDS 24740 25057 . + 0 ID=cds-MDY4307061.1;Parent=gene-SNF32_05800;Dbxref=NCBI_GP:MDY4307061.1;Name=MDY4307061.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05800;product=hypothetical protein;protein_id=MDY4307061.1;transl_table=11 JAXGFV010000008.1 Genbank gene 25015 25554 . + . ID=gene-SNF32_05805;Name=SNF32_05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05805 JAXGFV010000008.1 GeneMarkS-2+ CDS 25015 25554 . + 0 ID=cds-MDY4307062.1;Parent=gene-SNF32_05805;Dbxref=NCBI_GP:MDY4307062.1;Name=MDY4307062.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05805;product=hypothetical protein;protein_id=MDY4307062.1;transl_table=11 JAXGFV010000008.1 Genbank gene 25793 26722 . - . ID=gene-SNF32_05810;Name=SNF32_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05810 JAXGFV010000008.1 Protein Homology CDS 25793 26722 . - 0 ID=cds-MDY4307063.1;Parent=gene-SNF32_05810;Dbxref=NCBI_GP:MDY4307063.1;Name=MDY4307063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016172254.1;locus_tag=SNF32_05810;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=MDY4307063.1;transl_table=11 JAXGFV010000008.1 Genbank gene 26926 27063 . - . ID=gene-SNF32_05815;Name=SNF32_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05815 JAXGFV010000008.1 GeneMarkS-2+ CDS 26926 27063 . - 0 ID=cds-MDY4307064.1;Parent=gene-SNF32_05815;Dbxref=NCBI_GP:MDY4307064.1;Name=MDY4307064.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05815;product=hypothetical protein;protein_id=MDY4307064.1;transl_table=11 JAXGFV010000008.1 Genbank gene 27060 27227 . - . ID=gene-SNF32_05820;Name=SNF32_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05820 JAXGFV010000008.1 GeneMarkS-2+ CDS 27060 27227 . - 0 ID=cds-MDY4307065.1;Parent=gene-SNF32_05820;Dbxref=NCBI_GP:MDY4307065.1;Name=MDY4307065.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05820;product=hypothetical protein;protein_id=MDY4307065.1;transl_table=11 JAXGFV010000008.1 Genbank gene 28158 28283 . + . ID=gene-SNF32_05825;Name=SNF32_05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05825 JAXGFV010000008.1 GeneMarkS-2+ CDS 28158 28283 . + 0 ID=cds-MDY4307066.1;Parent=gene-SNF32_05825;Dbxref=NCBI_GP:MDY4307066.1;Name=MDY4307066.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05825;product=hypothetical protein;protein_id=MDY4307066.1;transl_table=11 JAXGFV010000008.1 Genbank gene 28684 29034 . + . ID=gene-SNF32_05830;Name=SNF32_05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05830 JAXGFV010000008.1 GeneMarkS-2+ CDS 28684 29034 . + 0 ID=cds-MDY4307067.1;Parent=gene-SNF32_05830;Dbxref=NCBI_GP:MDY4307067.1;Name=MDY4307067.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05830;product=hypothetical protein;protein_id=MDY4307067.1;transl_table=11 JAXGFV010000008.1 Genbank gene 29576 29731 . - . ID=gene-SNF32_05835;Name=SNF32_05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05835 JAXGFV010000008.1 GeneMarkS-2+ CDS 29576 29731 . - 0 ID=cds-MDY4307068.1;Parent=gene-SNF32_05835;Dbxref=NCBI_GP:MDY4307068.1;Name=MDY4307068.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05835;product=LPXTG cell wall anchor domain-containing protein;protein_id=MDY4307068.1;transl_table=11 JAXGFV010000008.1 Genbank gene 29728 30597 . - . ID=gene-SNF32_05840;Name=SNF32_05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05840 JAXGFV010000008.1 Protein Homology CDS 29728 30597 . - 0 ID=cds-MDY4307069.1;Parent=gene-SNF32_05840;Dbxref=NCBI_GP:MDY4307069.1;Name=MDY4307069.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023225.3;locus_tag=SNF32_05840;product=DUF916 and DUF3324 domain-containing protein;protein_id=MDY4307069.1;transl_table=11 JAXGFV010000008.1 Genbank gene 30724 31299 . - . ID=gene-SNF32_05845;Name=SNF32_05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05845 JAXGFV010000008.1 Protein Homology CDS 30724 31299 . - 0 ID=cds-MDY4307070.1;Parent=gene-SNF32_05845;Dbxref=NCBI_GP:MDY4307070.1;Name=MDY4307070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735043.1;locus_tag=SNF32_05845;product=hypothetical protein;protein_id=MDY4307070.1;transl_table=11 JAXGFV010000008.1 Genbank gene 31505 31777 . - . ID=gene-SNF32_05850;Name=SNF32_05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05850 JAXGFV010000008.1 GeneMarkS-2+ CDS 31505 31777 . - 0 ID=cds-MDY4307071.1;Parent=gene-SNF32_05850;Dbxref=NCBI_GP:MDY4307071.1;Name=MDY4307071.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05850;product=hypothetical protein;protein_id=MDY4307071.1;transl_table=11 JAXGFV010000008.1 Genbank gene 31878 32183 . - . ID=gene-SNF32_05855;Name=SNF32_05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05855 JAXGFV010000008.1 Protein Homology CDS 31878 32183 . - 0 ID=cds-MDY4307072.1;Parent=gene-SNF32_05855;Dbxref=NCBI_GP:MDY4307072.1;Name=MDY4307072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735041.1;locus_tag=SNF32_05855;product=LPXTG cell wall anchor domain-containing protein;protein_id=MDY4307072.1;transl_table=11 JAXGFV010000008.1 Genbank gene 32196 34802 . - . ID=gene-SNF32_05860;Name=SNF32_05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05860 JAXGFV010000008.1 GeneMarkS-2+ CDS 32196 34802 . - 0 ID=cds-MDY4307073.1;Parent=gene-SNF32_05860;Dbxref=NCBI_GP:MDY4307073.1;Name=MDY4307073.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05860;product=hypothetical protein;protein_id=MDY4307073.1;transl_table=11 JAXGFV010000008.1 Genbank gene 34837 35154 . - . ID=gene-SNF32_05865;Name=SNF32_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05865 JAXGFV010000008.1 GeneMarkS-2+ CDS 34837 35154 . - 0 ID=cds-MDY4307074.1;Parent=gene-SNF32_05865;Dbxref=NCBI_GP:MDY4307074.1;Name=MDY4307074.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05865;product=hypothetical protein;protein_id=MDY4307074.1;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 35621 37994 . - . ID=gene-SNF32_05870;Name=SNF32_05870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05870;pseudo=true JAXGFV010000008.1 Protein Homology CDS 35621 37994 . - 0 ID=cds-SNF32_05870;Parent=gene-SNF32_05870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724064.1;locus_tag=SNF32_05870;product=phosphoketolase family protein;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank gene 38257 39681 . - . ID=gene-SNF32_05875;Name=araA;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=SNF32_05875 JAXGFV010000008.1 Protein Homology CDS 38257 39681 . - 0 ID=cds-MDY4307075.1;Parent=gene-SNF32_05875;Dbxref=NCBI_GP:MDY4307075.1;Name=MDY4307075.1;Ontology_term=GO:0005996,GO:0008733;gbkey=CDS;gene=araA;go_function=L-arabinose isomerase activity|0008733||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002287282.1;locus_tag=SNF32_05875;product=L-arabinose isomerase;protein_id=MDY4307075.1;transl_table=11 JAXGFV010000008.1 Genbank gene 39695 40399 . - . ID=gene-SNF32_05880;Name=SNF32_05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05880 JAXGFV010000008.1 Protein Homology CDS 39695 40399 . - 0 ID=cds-MDY4307076.1;Parent=gene-SNF32_05880;Dbxref=NCBI_GP:MDY4307076.1;Name=MDY4307076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005873905.1;locus_tag=SNF32_05880;product=L-ribulose-5-phosphate 4-epimerase;protein_id=MDY4307076.1;transl_table=11 JAXGFV010000008.1 Genbank gene 40393 41931 . - . ID=gene-SNF32_05885;Name=SNF32_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05885 JAXGFV010000008.1 Protein Homology CDS 40393 41931 . - 0 ID=cds-MDY4307077.1;Parent=gene-SNF32_05885;Dbxref=NCBI_GP:MDY4307077.1;Name=MDY4307077.1;Ontology_term=GO:0005975,GO:0016301,GO:0016773;gbkey=CDS;go_function=kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735036.1;locus_tag=SNF32_05885;product=FGGY-family carbohydrate kinase;protein_id=MDY4307077.1;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 42279 43363 . - . ID=gene-SNF32_05890;Name=SNF32_05890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05890;pseudo=true JAXGFV010000008.1 Protein Homology CDS 42279 43363 . - 0 ID=cds-SNF32_05890;Parent=gene-SNF32_05890;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735035.1;locus_tag=SNF32_05890;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank gene 43538 43861 . - . ID=gene-SNF32_05895;Name=SNF32_05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05895 JAXGFV010000008.1 Protein Homology CDS 43538 43861 . - 0 ID=cds-MDY4307078.1;Parent=gene-SNF32_05895;Dbxref=NCBI_GP:MDY4307078.1;Name=MDY4307078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735034.1;locus_tag=SNF32_05895;product=PTS sugar transporter subunit IIB;protein_id=MDY4307078.1;transl_table=11 JAXGFV010000008.1 Genbank gene 43828 44991 . - . ID=gene-SNF32_05900;Name=mmsB;gbkey=Gene;gene=mmsB;gene_biotype=protein_coding;locus_tag=SNF32_05900 JAXGFV010000008.1 Protein Homology CDS 43828 44991 . - 0 ID=cds-MDY4307079.1;Parent=gene-SNF32_05900;Dbxref=NCBI_GP:MDY4307079.1;Name=MDY4307079.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mmsB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002303774.1;locus_tag=SNF32_05900;product=multiple monosaccharide ABC transporter permease;protein_id=MDY4307079.1;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 45074 46602 . - . ID=gene-SNF32_05905;Name=mmsA;gbkey=Gene;gene=mmsA;gene_biotype=pseudogene;locus_tag=SNF32_05905;pseudo=true JAXGFV010000008.1 Protein Homology CDS 45074 46602 . - 0 ID=cds-SNF32_05905;Parent=gene-SNF32_05905;Note=frameshifted;Ontology_term=GO:0043190;gbkey=CDS;gene=mmsA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002315151.1;locus_tag=SNF32_05905;product=multiple monosaccharide ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank gene 46895 47938 . - . ID=gene-SNF32_05910;Name=chvE;gbkey=Gene;gene=chvE;gene_biotype=protein_coding;locus_tag=SNF32_05910 JAXGFV010000008.1 Protein Homology CDS 46895 47938 . - 0 ID=cds-MDY4307080.1;Parent=gene-SNF32_05910;Dbxref=NCBI_GP:MDY4307080.1;Name=MDY4307080.1;Ontology_term=GO:0043190;gbkey=CDS;gene=chvE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010743974.1;locus_tag=SNF32_05910;product=multiple monosaccharide ABC transporter substrate-binding protein;protein_id=MDY4307080.1;transl_table=11 JAXGFV010000008.1 Genbank gene 48300 48599 . + . ID=gene-SNF32_05915;Name=SNF32_05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05915 JAXGFV010000008.1 Protein Homology CDS 48300 48599 . + 0 ID=cds-MDY4307081.1;Parent=gene-SNF32_05915;Dbxref=NCBI_GP:MDY4307081.1;Name=MDY4307081.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024799.3;locus_tag=SNF32_05915;product=substrate-binding domain-containing protein;protein_id=MDY4307081.1;transl_table=11 JAXGFV010000008.1 Genbank gene 48700 48957 . + . ID=gene-SNF32_05920;Name=SNF32_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05920 JAXGFV010000008.1 Protein Homology CDS 48700 48957 . + 0 ID=cds-MDY4307082.1;Parent=gene-SNF32_05920;Dbxref=NCBI_GP:MDY4307082.1;Name=MDY4307082.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024799.3;locus_tag=SNF32_05920;product=hypothetical protein;protein_id=MDY4307082.1;transl_table=11 JAXGFV010000008.1 Genbank gene 49018 49170 . + . ID=gene-SNF32_05925;Name=SNF32_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05925 JAXGFV010000008.1 GeneMarkS-2+ CDS 49018 49170 . + 0 ID=cds-MDY4307083.1;Parent=gene-SNF32_05925;Dbxref=NCBI_GP:MDY4307083.1;Name=MDY4307083.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05925;product=hypothetical protein;protein_id=MDY4307083.1;transl_table=11 JAXGFV010000008.1 Genbank gene 49508 49897 . + . ID=gene-SNF32_05930;Name=SNF32_05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05930 JAXGFV010000008.1 GeneMarkS-2+ CDS 49508 49897 . + 0 ID=cds-MDY4307084.1;Parent=gene-SNF32_05930;Dbxref=NCBI_GP:MDY4307084.1;Name=MDY4307084.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05930;product=hypothetical protein;protein_id=MDY4307084.1;transl_table=11 JAXGFV010000008.1 Genbank gene 49906 50601 . + . ID=gene-SNF32_05935;Name=SNF32_05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05935 JAXGFV010000008.1 Protein Homology CDS 49906 50601 . + 0 ID=cds-MDY4307085.1;Parent=gene-SNF32_05935;Dbxref=NCBI_GP:MDY4307085.1;Name=MDY4307085.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF014567.3;locus_tag=SNF32_05935;product=sensor histidine kinase;protein_id=MDY4307085.1;transl_table=11 JAXGFV010000008.1 Genbank gene 50617 50970 . + . ID=gene-SNF32_05940;Name=SNF32_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05940 JAXGFV010000008.1 Protein Homology CDS 50617 50970 . + 0 ID=cds-MDY4307086.1;Parent=gene-SNF32_05940;Dbxref=NCBI_GP:MDY4307086.1;Name=MDY4307086.1;Ontology_term=GO:0000160,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.3;locus_tag=SNF32_05940;product=response regulator;protein_id=MDY4307086.1;transl_table=11 JAXGFV010000008.1 Genbank gene 51337 51543 . + . ID=gene-SNF32_05945;Name=SNF32_05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05945 JAXGFV010000008.1 GeneMarkS-2+ CDS 51337 51543 . + 0 ID=cds-MDY4307087.1;Parent=gene-SNF32_05945;Dbxref=NCBI_GP:MDY4307087.1;Name=MDY4307087.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05945;product=hypothetical protein;protein_id=MDY4307087.1;transl_table=11 JAXGFV010000008.1 Genbank gene 51597 52184 . + . ID=gene-SNF32_05950;Name=SNF32_05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05950 JAXGFV010000008.1 Protein Homology CDS 51597 52184 . + 0 ID=cds-MDY4307088.1;Parent=gene-SNF32_05950;Dbxref=NCBI_GP:MDY4307088.1;Name=MDY4307088.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: protein motif:HMM:NF024242.3;locus_tag=SNF32_05950;product=AraC family transcriptional regulator;protein_id=MDY4307088.1;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 52375 52742 . + . ID=gene-SNF32_05955;Name=SNF32_05955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05955;pseudo=true JAXGFV010000008.1 Protein Homology CDS 52375 52742 . + 0 ID=cds-SNF32_05955;Parent=gene-SNF32_05955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014627.3;locus_tag=SNF32_05955;product=YitT family protein;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank gene 53296 56508 . - . ID=gene-SNF32_05960;Name=SNF32_05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05960 JAXGFV010000008.1 Protein Homology CDS 53296 56508 . - 0 ID=cds-MDY4307089.1;Parent=gene-SNF32_05960;Dbxref=NCBI_GP:MDY4307089.1;Name=MDY4307089.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: protein motif:HMM:NF012948.3;locus_tag=SNF32_05960;product=LPXTG cell wall anchor domain-containing protein;protein_id=MDY4307089.1;transl_table=11 JAXGFV010000008.1 Genbank gene 56542 56697 . - . ID=gene-SNF32_05965;Name=SNF32_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05965 JAXGFV010000008.1 GeneMarkS-2+ CDS 56542 56697 . - 0 ID=cds-MDY4307090.1;Parent=gene-SNF32_05965;Dbxref=NCBI_GP:MDY4307090.1;Name=MDY4307090.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_05965;product=hypothetical protein;protein_id=MDY4307090.1;transl_table=11 JAXGFV010000008.1 Genbank gene 56797 57285 . - . ID=gene-SNF32_05970;Name=SNF32_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05970 JAXGFV010000008.1 Protein Homology CDS 56797 57285 . - 0 ID=cds-MDY4307091.1;Parent=gene-SNF32_05970;Dbxref=NCBI_GP:MDY4307091.1;Name=MDY4307091.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF019604.3;locus_tag=SNF32_05970;product=FAD-dependent oxidoreductase;protein_id=MDY4307091.1;transl_table=11 JAXGFV010000008.1 Genbank gene 57282 57536 . - . ID=gene-SNF32_05975;Name=SNF32_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05975 JAXGFV010000008.1 Protein Homology CDS 57282 57536 . - 0 ID=cds-MDY4307092.1;Parent=gene-SNF32_05975;Dbxref=NCBI_GP:MDY4307092.1;Name=MDY4307092.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012299.3;locus_tag=SNF32_05975;product=FAD-dependent oxidoreductase;protein_id=MDY4307092.1;transl_table=11 JAXGFV010000008.1 Genbank gene 57536 57844 . - . ID=gene-SNF32_05980;Name=SNF32_05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05980 JAXGFV010000008.1 Protein Homology CDS 57536 57844 . - 0 ID=cds-MDY4307093.1;Parent=gene-SNF32_05980;Dbxref=NCBI_GP:MDY4307093.1;Name=MDY4307093.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF019604.3;locus_tag=SNF32_05980;product=FAD-dependent oxidoreductase;protein_id=MDY4307093.1;transl_table=11 JAXGFV010000008.1 Genbank gene 58438 59142 . - . ID=gene-SNF32_05985;Name=SNF32_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05985 JAXGFV010000008.1 Protein Homology CDS 58438 59142 . - 0 ID=cds-MDY4307094.1;Parent=gene-SNF32_05985;Dbxref=NCBI_GP:MDY4307094.1;Name=MDY4307094.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724136.1;locus_tag=SNF32_05985;product=fructose-6-phosphate aldolase;protein_id=MDY4307094.1;transl_table=11 JAXGFV010000008.1 Genbank gene 59180 59536 . - . ID=gene-SNF32_05990;Name=SNF32_05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_05990 JAXGFV010000008.1 Protein Homology CDS 59180 59536 . - 0 ID=cds-MDY4307095.1;Parent=gene-SNF32_05990;Dbxref=NCBI_GP:MDY4307095.1;Name=MDY4307095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016621850.1;locus_tag=SNF32_05990;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=MDY4307095.1;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 59552 60557 . - . ID=gene-SNF32_05995;Name=SNF32_05995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_05995;pseudo=true JAXGFV010000008.1 Protein Homology CDS 59552 60557 . - 0 ID=cds-SNF32_05995;Parent=gene-SNF32_05995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016174079.1;locus_tag=SNF32_05995;product=PTS glucitol/sorbitol transporter subunit IIB;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 60573 61126 . - . ID=gene-SNF32_06000;Name=SNF32_06000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06000;pseudo=true JAXGFV010000008.1 Protein Homology CDS 60573 61126 . - 0 ID=cds-SNF32_06000;Parent=gene-SNF32_06000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002327877.1;locus_tag=SNF32_06000;product=PTS glucitol/sorbitol transporter subunit IIC;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 61130 61605 . - . ID=gene-SNF32_06005;Name=SNF32_06005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06005;pseudo=true JAXGFV010000008.1 Protein Homology CDS 61130 61605 . - 0 ID=cds-SNF32_06005;Parent=gene-SNF32_06005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004228593.1;locus_tag=SNF32_06005;product=transcriptional regulator GutM;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank gene 61721 62614 . - . ID=gene-SNF32_06010;Name=SNF32_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06010 JAXGFV010000008.1 Protein Homology CDS 61721 62614 . - 0 ID=cds-MDY4307096.1;Parent=gene-SNF32_06010;Dbxref=NCBI_GP:MDY4307096.1;Name=MDY4307096.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013070.3;locus_tag=SNF32_06010;product=PTS sugar transporter subunit IIA;protein_id=MDY4307096.1;transl_table=11 JAXGFV010000008.1 Genbank gene 62611 62811 . - . ID=gene-SNF32_06015;Name=SNF32_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06015 JAXGFV010000008.1 GeneMarkS-2+ CDS 62611 62811 . - 0 ID=cds-MDY4307097.1;Parent=gene-SNF32_06015;Dbxref=NCBI_GP:MDY4307097.1;Name=MDY4307097.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06015;product=hypothetical protein;protein_id=MDY4307097.1;transl_table=11 JAXGFV010000008.1 Genbank gene 62867 63148 . - . ID=gene-SNF32_06020;Name=SNF32_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06020 JAXGFV010000008.1 Protein Homology CDS 62867 63148 . - 0 ID=cds-MDY4307098.1;Parent=gene-SNF32_06020;Dbxref=NCBI_GP:MDY4307098.1;Name=MDY4307098.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016901.3;locus_tag=SNF32_06020;product=helix-turn-helix domain-containing protein;protein_id=MDY4307098.1;transl_table=11 JAXGFV010000008.1 Genbank gene 63330 63401 . - . ID=gene-SNF32_06025;Name=SNF32_06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06025 JAXGFV010000008.1 Protein Homology CDS 63330 63401 . - 0 ID=cds-MDY4307099.1;Parent=gene-SNF32_06025;Dbxref=NCBI_GP:MDY4307099.1;Name=MDY4307099.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019884.3;locus_tag=SNF32_06025;product=hypothetical protein;protein_id=MDY4307099.1;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 63394 63441 . - . ID=gene-SNF32_06030;Name=SNF32_06030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06030;pseudo=true JAXGFV010000008.1 Protein Homology CDS 63394 63441 . - 0 ID=cds-SNF32_06030;Parent=gene-SNF32_06030;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019826.3;locus_tag=SNF32_06030;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank gene 63475 64275 . - . ID=gene-SNF32_06035;Name=SNF32_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06035 JAXGFV010000008.1 Protein Homology CDS 63475 64275 . - 0 ID=cds-MDY4307100.1;Parent=gene-SNF32_06035;Dbxref=NCBI_GP:MDY4307100.1;Name=MDY4307100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002379817.1;locus_tag=SNF32_06035;product=SDR family oxidoreductase;protein_id=MDY4307100.1;transl_table=11 JAXGFV010000008.1 Genbank gene 64452 64547 . - . ID=gene-SNF32_06040;Name=SNF32_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06040 JAXGFV010000008.1 Protein Homology CDS 64452 64547 . - 0 ID=cds-MDY4307101.1;Parent=gene-SNF32_06040;Dbxref=NCBI_GP:MDY4307101.1;Name=MDY4307101.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01167.1;locus_tag=SNF32_06040;product=hypothetical protein;protein_id=MDY4307101.1;transl_table=11 JAXGFV010000008.1 Genbank gene 64595 65932 . - . ID=gene-SNF32_06045;Name=SNF32_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06045 JAXGFV010000008.1 Protein Homology CDS 64595 65932 . - 0 ID=cds-MDY4307102.1;Parent=gene-SNF32_06045;Dbxref=NCBI_GP:MDY4307102.1;Name=MDY4307102.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021028.3;locus_tag=SNF32_06045;product=InlB B-repeat-containing protein;protein_id=MDY4307102.1;transl_table=11 JAXGFV010000008.1 Genbank gene 66612 66701 . - . ID=gene-SNF32_06050;Name=SNF32_06050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06050 JAXGFV010000008.1 Protein Homology CDS 66612 66701 . - 0 ID=cds-MDY4307103.1;Parent=gene-SNF32_06050;Dbxref=NCBI_GP:MDY4307103.1;Name=MDY4307103.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016855.3;locus_tag=SNF32_06050;product=hypothetical protein;protein_id=MDY4307103.1;transl_table=11 JAXGFV010000008.1 Genbank gene 66662 66868 . - . ID=gene-SNF32_06055;Name=SNF32_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06055 JAXGFV010000008.1 Protein Homology CDS 66662 66868 . - 0 ID=cds-MDY4307104.1;Parent=gene-SNF32_06055;Dbxref=NCBI_GP:MDY4307104.1;Name=MDY4307104.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016855.3;locus_tag=SNF32_06055;product=TfoX/Sxy family DNA transformation protein;protein_id=MDY4307104.1;transl_table=11 JAXGFV010000008.1 cmsearch riboswitch 67092 67189 . + . ID=id-JAXGFV010000008.1:67092..67189;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch JAXGFV010000008.1 Genbank pseudogene 67282 68073 . + . ID=gene-SNF32_06060;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=pseudogene;locus_tag=SNF32_06060;pseudo=true JAXGFV010000008.1 Protein Homology CDS 67282 68073 . + 0 ID=cds-SNF32_06060;Parent=gene-SNF32_06060;Note=frameshifted;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735013.1;locus_tag=SNF32_06060;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank gene 68070 68882 . + . ID=gene-SNF32_06065;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=SNF32_06065 JAXGFV010000008.1 Protein Homology CDS 68070 68882 . + 0 ID=cds-MDY4307105.1;Parent=gene-SNF32_06065;Dbxref=NCBI_GP:MDY4307105.1;Name=MDY4307105.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735012.1;locus_tag=SNF32_06065;product=hydroxyethylthiazole kinase;protein_id=MDY4307105.1;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 69038 69357 . + . ID=gene-SNF32_06070;Name=SNF32_06070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06070;pseudo=true JAXGFV010000008.1 Protein Homology CDS 69038 69357 . + 0 ID=cds-SNF32_06070;Parent=gene-SNF32_06070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014622.3;locus_tag=SNF32_06070;product=thiamine phosphate synthase;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank gene 69354 69515 . + . ID=gene-SNF32_06075;Name=SNF32_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06075 JAXGFV010000008.1 Protein Homology CDS 69354 69515 . + 0 ID=cds-MDY4307106.1;Parent=gene-SNF32_06075;Dbxref=NCBI_GP:MDY4307106.1;Name=MDY4307106.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014622.3;locus_tag=SNF32_06075;product=hypothetical protein;protein_id=MDY4307106.1;transl_table=11 JAXGFV010000008.1 Genbank gene 69658 70005 . - . ID=gene-SNF32_06080;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=SNF32_06080 JAXGFV010000008.1 Protein Homology CDS 69658 70005 . - 0 ID=cds-MDY4307107.1;Parent=gene-SNF32_06080;Dbxref=NCBI_GP:MDY4307107.1;Name=MDY4307107.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005590628.1;locus_tag=SNF32_06080;product=50S ribosomal protein L19;protein_id=MDY4307107.1;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 70176 70884 . - . ID=gene-SNF32_06085;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=pseudogene;locus_tag=SNF32_06085;pseudo=true JAXGFV010000008.1 Protein Homology CDS 70176 70884 . - 0 ID=cds-SNF32_06085;Parent=gene-SNF32_06085;Note=frameshifted;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002290282.1;locus_tag=SNF32_06085;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 70874 71397 . - . ID=gene-SNF32_06090;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=pseudogene;locus_tag=SNF32_06090;pseudo=true JAXGFV010000008.1 Protein Homology CDS 70874 71397 . - 0 ID=cds-SNF32_06090;Parent=gene-SNF32_06090;Note=Essential for efficient processing of 16S rRNA%3B frameshifted;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002319275.1;locus_tag=SNF32_06090;product=ribosome maturation factor RimM;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank gene 71561 72082 . - . ID=gene-SNF32_06095;Name=SNF32_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06095 JAXGFV010000008.1 GeneMarkS-2+ CDS 71561 72082 . - 0 ID=cds-MDY4307108.1;Parent=gene-SNF32_06095;Dbxref=NCBI_GP:MDY4307108.1;Name=MDY4307108.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06095;product=hypothetical protein;protein_id=MDY4307108.1;transl_table=11 JAXGFV010000008.1 Genbank gene 72046 72321 . - . ID=gene-SNF32_06100;Name=SNF32_06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06100 JAXGFV010000008.1 GeneMarkS-2+ CDS 72046 72321 . - 0 ID=cds-MDY4307109.1;Parent=gene-SNF32_06100;Dbxref=NCBI_GP:MDY4307109.1;Name=MDY4307109.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06100;product=hypothetical protein;protein_id=MDY4307109.1;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 72439 72686 . - . ID=gene-SNF32_06105;Name=SNF32_06105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06105;pseudo=true JAXGFV010000008.1 Protein Homology CDS 72439 72686 . - 0 ID=cds-SNF32_06105;Parent=gene-SNF32_06105;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875630.1;locus_tag=SNF32_06105;product=KH domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 72698 72972 . - . ID=gene-SNF32_06110;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=pseudogene;locus_tag=SNF32_06110;pseudo=true JAXGFV010000008.1 Protein Homology CDS 72698 72972 . - 0 ID=cds-SNF32_06110;Parent=gene-SNF32_06110;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016175618.1;locus_tag=SNF32_06110;product=30S ribosomal protein S16;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank gene 73279 73839 . + . ID=gene-SNF32_06115;Name=SNF32_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06115 JAXGFV010000008.1 Protein Homology CDS 73279 73839 . + 0 ID=cds-MDY4307110.1;Parent=gene-SNF32_06115;Dbxref=NCBI_GP:MDY4307110.1;Name=MDY4307110.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008268229.1;locus_tag=SNF32_06115;product=NAD(P)H-dependent oxidoreductase;protein_id=MDY4307110.1;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 73903 74402 . - . ID=gene-SNF32_06120;Name=SNF32_06120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06120;pseudo=true JAXGFV010000008.1 Protein Homology CDS 73903 74402 . - 0 ID=cds-SNF32_06120;Parent=gene-SNF32_06120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005875614.1;locus_tag=SNF32_06120;product=dihydrofolate reductase family protein;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 74449 75009 . - . ID=gene-SNF32_06125;Name=SNF32_06125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06125;pseudo=true JAXGFV010000008.1 Protein Homology CDS 74449 75009 . - 0 ID=cds-SNF32_06125;Parent=gene-SNF32_06125;Note=frameshifted;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735003.1;locus_tag=SNF32_06125;product=DNA-3-methyladenine glycosylase I;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 75104 76516 . - . ID=gene-SNF32_06130;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=pseudogene;locus_tag=SNF32_06130;pseudo=true JAXGFV010000008.1 Protein Homology CDS 75104 76516 . - 0 ID=cds-SNF32_06130;Parent=gene-SNF32_06130;Note=frameshifted;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002291602.1;locus_tag=SNF32_06130;product=signal recognition particle protein;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 76524 76871 . - . ID=gene-SNF32_06135;Name=SNF32_06135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06135;pseudo=true JAXGFV010000008.1 Protein Homology CDS 76524 76871 . - 0 ID=cds-SNF32_06135;Parent=gene-SNF32_06135;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005228897.1;locus_tag=SNF32_06135;product=putative DNA-binding protein;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 76861 77331 . - . ID=gene-SNF32_06140;Name=SNF32_06140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06140;pseudo=true JAXGFV010000008.1 Protein Homology CDS 76861 77331 . - 0 ID=cds-SNF32_06140;Parent=gene-SNF32_06140;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016613840.1;locus_tag=SNF32_06140;product=DUF523 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 77434 78160 . + . ID=gene-SNF32_06145;Name=SNF32_06145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06145;pseudo=true JAXGFV010000008.1 Protein Homology CDS 77434 78160 . + 0 ID=cds-SNF32_06145;Parent=gene-SNF32_06145;Note=frameshifted;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734999.1;locus_tag=SNF32_06145;product=response regulator transcription factor;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 78167 79893 . + . ID=gene-SNF32_06150;Name=SNF32_06150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06150;pseudo=true JAXGFV010000008.1 Protein Homology CDS 78167 79893 . + 0 ID=cds-SNF32_06150;Parent=gene-SNF32_06150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734998.1;locus_tag=SNF32_06150;product=ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 80066 82265 . - . ID=gene-SNF32_06155;Name=SNF32_06155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06155;pseudo=true JAXGFV010000008.1 Protein Homology CDS 80066 82265 . - 0 ID=cds-SNF32_06155;Parent=gene-SNF32_06155;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002298789.1;locus_tag=SNF32_06155;product=cation-translocating P-type ATPase;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 82661 83547 . - . ID=gene-SNF32_06160;Name=SNF32_06160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06160;pseudo=true JAXGFV010000008.1 Protein Homology CDS 82661 83547 . - 0 ID=cds-SNF32_06160;Parent=gene-SNF32_06160;Note=frameshifted;Ontology_term=GO:0042301;gbkey=CDS;go_function=phosphate ion binding|0042301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017867074.1;locus_tag=SNF32_06160;product=phosphate ABC transporter substrate-binding protein PstS family protein;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 83683 84151 . - . ID=gene-SNF32_06165;Name=SNF32_06165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06165;pseudo=true JAXGFV010000008.1 Protein Homology CDS 83683 84151 . - 0 ID=cds-SNF32_06165;Parent=gene-SNF32_06165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734995.1;locus_tag=SNF32_06165;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 84835 85436 . - . ID=gene-SNF32_06170;Name=SNF32_06170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06170;pseudo=true JAXGFV010000008.1 Protein Homology CDS 84835 85436 . - 0 ID=cds-SNF32_06170;Parent=gene-SNF32_06170;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015510144.1;locus_tag=SNF32_06170;product=type II toxin-antitoxin system Phd/YefM family antitoxin;pseudo=true;transl_table=11 JAXGFV010000008.1 Genbank pseudogene 85479 86795 . - . ID=gene-SNF32_06175;Name=SNF32_06175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06175;pseudo=true JAXGFV010000008.1 Protein Homology CDS 85479 86795 . - 0 ID=cds-SNF32_06175;Parent=gene-SNF32_06175;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734992.1;locus_tag=SNF32_06175;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000080.1 1 7201 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000080.1 Genbank region 1 7201 . + . ID=JAXGFV010000080.1:1..7201;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000080.1 Genbank gene 1 490 . - . ID=gene-SNF32_16210;Name=SNF32_16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16210;partial=true;start_range=.,1 JAXGFV010000080.1 Protein Homology CDS 1 490 . - 0 ID=cds-MDY4308109.1;Parent=gene-SNF32_16210;Dbxref=NCBI_GP:MDY4308109.1;Name=MDY4308109.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF014684.3;locus_tag=SNF32_16210;partial=true;product=ABC transporter permease;protein_id=MDY4308109.1;start_range=.,1;transl_table=11 JAXGFV010000080.1 Genbank gene 414 881 . - . ID=gene-SNF32_16215;Name=SNF32_16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16215 JAXGFV010000080.1 Protein Homology CDS 414 881 . - 0 ID=cds-MDY4308110.1;Parent=gene-SNF32_16215;Dbxref=NCBI_GP:MDY4308110.1;Name=MDY4308110.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014684.3;locus_tag=SNF32_16215;product=hypothetical protein;protein_id=MDY4308110.1;transl_table=11 JAXGFV010000080.1 Genbank pseudogene 923 2430 . - . ID=gene-SNF32_16220;Name=SNF32_16220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16220;pseudo=true JAXGFV010000080.1 Protein Homology CDS 923 2430 . - 0 ID=cds-SNF32_16220;Parent=gene-SNF32_16220;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019722724.1;locus_tag=SNF32_16220;product=sugar ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000080.1 Genbank pseudogene 2471 4086 . - . ID=gene-SNF32_16225;Name=SNF32_16225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16225;pseudo=true JAXGFV010000080.1 Protein Homology CDS 2471 4086 . - 0 ID=cds-SNF32_16225;Parent=gene-SNF32_16225;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734022.1;locus_tag=SNF32_16225;product=glycoside hydrolase family 43 protein;pseudo=true;transl_table=11 JAXGFV010000080.1 Genbank pseudogene 4189 5492 . - . ID=gene-SNF32_16230;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=pseudogene;locus_tag=SNF32_16230;pseudo=true JAXGFV010000080.1 Protein Homology CDS 4189 5492 . - 0 ID=cds-SNF32_16230;Parent=gene-SNF32_16230;Note=frameshifted;Ontology_term=GO:0006098,GO:0042732,GO:0000287,GO:0009045;gbkey=CDS;gene=xylA;go_function=magnesium ion binding|0000287||IEA,xylose isomerase activity|0009045||IEA;go_process=pentose-phosphate shunt|0006098||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734021.1;locus_tag=SNF32_16230;product=xylose isomerase;pseudo=true;transl_table=11 JAXGFV010000080.1 Genbank gene 5809 5895 . + . ID=gene-SNF32_16235;Name=SNF32_16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16235 JAXGFV010000080.1 Protein Homology CDS 5809 5895 . + 0 ID=cds-MDY4308111.1;Parent=gene-SNF32_16235;Dbxref=NCBI_GP:MDY4308111.1;Name=MDY4308111.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024804.3;locus_tag=SNF32_16235;product=helix-turn-helix domain-containing protein;protein_id=MDY4308111.1;transl_table=11 JAXGFV010000080.1 Genbank gene 5892 6092 . + . ID=gene-SNF32_16240;Name=SNF32_16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16240 JAXGFV010000080.1 GeneMarkS-2+ CDS 5892 6092 . + 0 ID=cds-MDY4308112.1;Parent=gene-SNF32_16240;Dbxref=NCBI_GP:MDY4308112.1;Name=MDY4308112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16240;product=hypothetical protein;protein_id=MDY4308112.1;transl_table=11 JAXGFV010000080.1 Genbank gene 6185 6571 . + . ID=gene-SNF32_16245;Name=SNF32_16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16245 JAXGFV010000080.1 Protein Homology CDS 6185 6571 . + 0 ID=cds-MDY4308113.1;Parent=gene-SNF32_16245;Dbxref=NCBI_GP:MDY4308113.1;Name=MDY4308113.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012692.3;locus_tag=SNF32_16245;product=ROK family protein;protein_id=MDY4308113.1;transl_table=11 JAXGFV010000080.1 Genbank gene 6538 6714 . + . ID=gene-SNF32_16250;Name=SNF32_16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16250 JAXGFV010000080.1 GeneMarkS-2+ CDS 6538 6714 . + 0 ID=cds-MDY4308114.1;Parent=gene-SNF32_16250;Dbxref=NCBI_GP:MDY4308114.1;Name=MDY4308114.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16250;product=hypothetical protein;protein_id=MDY4308114.1;transl_table=11 JAXGFV010000080.1 Genbank gene 6744 6896 . + . ID=gene-SNF32_16255;Name=SNF32_16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16255 JAXGFV010000080.1 GeneMarkS-2+ CDS 6744 6896 . + 0 ID=cds-MDY4308115.1;Parent=gene-SNF32_16255;Dbxref=NCBI_GP:MDY4308115.1;Name=MDY4308115.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16255;product=hypothetical protein;protein_id=MDY4308115.1;transl_table=11 JAXGFV010000080.1 Genbank gene 7022 7201 . - . ID=gene-SNF32_16260;Name=SNF32_16260;end_range=7201,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16260;partial=true JAXGFV010000080.1 Protein Homology CDS 7022 7201 . - 0 ID=cds-MDY4308116.1;Parent=gene-SNF32_16260;Dbxref=NCBI_GP:MDY4308116.1;Name=MDY4308116.1;end_range=7201,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737506.1;locus_tag=SNF32_16260;partial=true;product=transketolase;protein_id=MDY4308116.1;transl_table=11 ##sequence-region JAXGFV010000081.1 1 6968 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000081.1 Genbank region 1 6968 . + . ID=JAXGFV010000081.1:1..6968;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000081.1 Genbank gene 165 524 . - . ID=gene-SNF32_16265;Name=SNF32_16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16265 JAXGFV010000081.1 Protein Homology CDS 165 524 . - 0 ID=cds-MDY4308117.1;Parent=gene-SNF32_16265;Dbxref=NCBI_GP:MDY4308117.1;Name=MDY4308117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723202.1;locus_tag=SNF32_16265;product=DUF1827 family protein;protein_id=MDY4308117.1;transl_table=11 JAXGFV010000081.1 Genbank pseudogene 713 1462 . + . ID=gene-SNF32_16270;Name=SNF32_16270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16270;pseudo=true JAXGFV010000081.1 Protein Homology CDS 713 1462 . + 0 ID=cds-SNF32_16270;Parent=gene-SNF32_16270;Note=internal stop;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016629563.1;locus_tag=SNF32_16270;product=MerR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000081.1 Genbank gene 1503 2426 . - . ID=gene-SNF32_16275;Name=SNF32_16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16275 JAXGFV010000081.1 Protein Homology CDS 1503 2426 . - 0 ID=cds-MDY4308118.1;Parent=gene-SNF32_16275;Dbxref=NCBI_GP:MDY4308118.1;Name=MDY4308118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736682.1;locus_tag=SNF32_16275;product=LacI family DNA-binding transcriptional regulator;protein_id=MDY4308118.1;transl_table=11 JAXGFV010000081.1 Genbank pseudogene 2443 2713 . - . ID=gene-SNF32_16280;Name=SNF32_16280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16280;pseudo=true JAXGFV010000081.1 Protein Homology CDS 2443 2713 . - 0 ID=cds-SNF32_16280;Parent=gene-SNF32_16280;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002310043.1;locus_tag=SNF32_16280;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000081.1 Genbank pseudogene 2786 4190 . - . ID=gene-SNF32_16285;Name=SNF32_16285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16285;pseudo=true JAXGFV010000081.1 Protein Homology CDS 2786 4190 . - 0 ID=cds-SNF32_16285;Parent=gene-SNF32_16285;Note=frameshifted%3B internal stop;Ontology_term=GO:0009401,GO:0016773,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002293624.1;locus_tag=SNF32_16285;product=PTS sugar transporter subunit IIC;pseudo=true;transl_table=11 JAXGFV010000081.1 Genbank gene 4519 6144 . - . ID=gene-SNF32_16290;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=SNF32_16290 JAXGFV010000081.1 Protein Homology CDS 4519 6144 . - 0 ID=cds-MDY4308119.1;Parent=gene-SNF32_16290;Dbxref=NCBI_GP:MDY4308119.1;Name=MDY4308119.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736685.1;locus_tag=SNF32_16290;product=chaperonin GroEL;protein_id=MDY4308119.1;transl_table=11 JAXGFV010000081.1 Genbank gene 6180 6464 . - . ID=gene-SNF32_16295;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=SNF32_16295 JAXGFV010000081.1 Protein Homology CDS 6180 6464 . - 0 ID=cds-MDY4308120.1;Parent=gene-SNF32_16295;Dbxref=NCBI_GP:MDY4308120.1;Name=MDY4308120.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=groES;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010738650.1;locus_tag=SNF32_16295;product=co-chaperone GroES;protein_id=MDY4308120.1;transl_table=11 JAXGFV010000081.1 Genbank pseudogene 6814 6968 . + . ID=gene-SNF32_16300;Name=SNF32_16300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16300;pseudo=true JAXGFV010000081.1 Protein Homology CDS 6814 6968 . + 0 ID=cds-SNF32_16300;Parent=gene-SNF32_16300;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005880132.1;locus_tag=SNF32_16300;product=CPBP family intramembrane glutamate endopeptidase;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000082.1 1 6822 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000082.1 Genbank region 1 6822 . + . ID=JAXGFV010000082.1:1..6822;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000082.1 Genbank gene 48 170 . + . ID=gene-SNF32_16305;Name=SNF32_16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16305 JAXGFV010000082.1 GeneMarkS-2+ CDS 48 170 . + 0 ID=cds-MDY4308121.1;Parent=gene-SNF32_16305;Dbxref=NCBI_GP:MDY4308121.1;Name=MDY4308121.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16305;product=hypothetical protein;protein_id=MDY4308121.1;transl_table=11 JAXGFV010000082.1 Genbank gene 333 479 . + . ID=gene-SNF32_16310;Name=SNF32_16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16310 JAXGFV010000082.1 GeneMarkS-2+ CDS 333 479 . + 0 ID=cds-MDY4308122.1;Parent=gene-SNF32_16310;Dbxref=NCBI_GP:MDY4308122.1;Name=MDY4308122.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16310;product=hypothetical protein;protein_id=MDY4308122.1;transl_table=11 JAXGFV010000082.1 Genbank gene 501 668 . + . ID=gene-SNF32_16315;Name=SNF32_16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16315 JAXGFV010000082.1 GeneMarkS-2+ CDS 501 668 . + 0 ID=cds-MDY4308123.1;Parent=gene-SNF32_16315;Dbxref=NCBI_GP:MDY4308123.1;Name=MDY4308123.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16315;product=hypothetical protein;protein_id=MDY4308123.1;transl_table=11 JAXGFV010000082.1 Genbank gene 794 1072 . + . ID=gene-SNF32_16320;Name=SNF32_16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16320 JAXGFV010000082.1 GeneMarkS-2+ CDS 794 1072 . + 0 ID=cds-MDY4308124.1;Parent=gene-SNF32_16320;Dbxref=NCBI_GP:MDY4308124.1;Name=MDY4308124.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16320;product=hypothetical protein;protein_id=MDY4308124.1;transl_table=11 JAXGFV010000082.1 Genbank pseudogene 1720 2270 . + . ID=gene-SNF32_16325;Name=SNF32_16325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16325;pseudo=true JAXGFV010000082.1 Protein Homology CDS 1720 2270 . + 0 ID=cds-SNF32_16325;Parent=gene-SNF32_16325;Note=frameshifted;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735142.1;locus_tag=SNF32_16325;product=5-formyltetrahydrofolate cyclo-ligase;pseudo=true;transl_table=11 JAXGFV010000082.1 Genbank pseudogene 2288 2990 . + . ID=gene-SNF32_16330;Name=SNF32_16330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16330;pseudo=true JAXGFV010000082.1 Protein Homology CDS 2288 2990 . + 0 ID=cds-SNF32_16330;Parent=gene-SNF32_16330;Note=frameshifted;Ontology_term=GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002316357.1;locus_tag=SNF32_16330;product=rhomboid family intramembrane serine protease;pseudo=true;transl_table=11 JAXGFV010000082.1 Genbank gene 3010 3219 . + . ID=gene-SNF32_16335;Name=SNF32_16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16335 JAXGFV010000082.1 Protein Homology CDS 3010 3219 . + 0 ID=cds-MDY4308125.1;Parent=gene-SNF32_16335;Dbxref=NCBI_GP:MDY4308125.1;Name=MDY4308125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735144.1;locus_tag=SNF32_16335;product=YqgQ family protein;protein_id=MDY4308125.1;transl_table=11 JAXGFV010000082.1 Genbank pseudogene 3233 4185 . + . ID=gene-SNF32_16340;Name=SNF32_16340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16340;pseudo=true JAXGFV010000082.1 Protein Homology CDS 3233 4185 . + 0 ID=cds-SNF32_16340;Parent=gene-SNF32_16340;Note=frameshifted;Ontology_term=GO:0006096,GO:0004340;gbkey=CDS;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723942.1;locus_tag=SNF32_16340;product=ROK family glucokinase;pseudo=true;transl_table=11 JAXGFV010000082.1 Genbank pseudogene 4200 4587 . + . ID=gene-SNF32_16345;Name=SNF32_16345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16345;pseudo=true JAXGFV010000082.1 Protein Homology CDS 4200 4587 . + 0 ID=cds-SNF32_16345;Parent=gene-SNF32_16345;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003690631.1;locus_tag=SNF32_16345;product=rhodanese-like domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000082.1 Genbank gene 4923 5630 . + . ID=gene-SNF32_16350;Name=SNF32_16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16350 JAXGFV010000082.1 Protein Homology CDS 4923 5630 . + 0 ID=cds-MDY4308126.1;Parent=gene-SNF32_16350;Dbxref=NCBI_GP:MDY4308126.1;Name=MDY4308126.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024846.3;locus_tag=SNF32_16350;product=FAD/NAD(P)-binding protein;protein_id=MDY4308126.1;transl_table=11 JAXGFV010000082.1 Genbank gene 5627 5836 . + . ID=gene-SNF32_16355;Name=SNF32_16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16355 JAXGFV010000082.1 GeneMarkS-2+ CDS 5627 5836 . + 0 ID=cds-MDY4308127.1;Parent=gene-SNF32_16355;Dbxref=NCBI_GP:MDY4308127.1;Name=MDY4308127.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16355;product=hypothetical protein;protein_id=MDY4308127.1;transl_table=11 JAXGFV010000082.1 Genbank gene 5894 6289 . + . ID=gene-SNF32_16360;Name=SNF32_16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16360 JAXGFV010000082.1 GeneMarkS-2+ CDS 5894 6289 . + 0 ID=cds-MDY4308128.1;Parent=gene-SNF32_16360;Dbxref=NCBI_GP:MDY4308128.1;Name=MDY4308128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16360;product=hypothetical protein;protein_id=MDY4308128.1;transl_table=11 JAXGFV010000082.1 Genbank gene 6295 6453 . + . ID=gene-SNF32_16365;Name=SNF32_16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16365 JAXGFV010000082.1 GeneMarkS-2+ CDS 6295 6453 . + 0 ID=cds-MDY4308129.1;Parent=gene-SNF32_16365;Dbxref=NCBI_GP:MDY4308129.1;Name=MDY4308129.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16365;product=hypothetical protein;protein_id=MDY4308129.1;transl_table=11 JAXGFV010000082.1 Genbank gene 6450 6698 . + . ID=gene-SNF32_16370;Name=SNF32_16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16370 JAXGFV010000082.1 GeneMarkS-2+ CDS 6450 6698 . + 0 ID=cds-MDY4308130.1;Parent=gene-SNF32_16370;Dbxref=NCBI_GP:MDY4308130.1;Name=MDY4308130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16370;product=hypothetical protein;protein_id=MDY4308130.1;transl_table=11 ##sequence-region JAXGFV010000083.1 1 6641 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000083.1 Genbank region 1 6641 . + . ID=JAXGFV010000083.1:1..6641;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000083.1 Genbank gene 1 1011 . + . ID=gene-SNF32_16375;Name=SNF32_16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16375;partial=true;start_range=.,1 JAXGFV010000083.1 Protein Homology CDS 1 1011 . + 0 ID=cds-MDY4308131.1;Parent=gene-SNF32_16375;Dbxref=NCBI_GP:MDY4308131.1;Name=MDY4308131.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734558.1;locus_tag=SNF32_16375;partial=true;product=DNA gyrase C-terminal beta-propeller domain-containing protein;protein_id=MDY4308131.1;start_range=.,1;transl_table=11 JAXGFV010000083.1 Genbank gene 1249 1548 . + . ID=gene-SNF32_16380;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=SNF32_16380 JAXGFV010000083.1 Protein Homology CDS 1249 1548 . + 0 ID=cds-MDY4308132.1;Parent=gene-SNF32_16380;Dbxref=NCBI_GP:MDY4308132.1;Name=MDY4308132.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005226363.1;locus_tag=SNF32_16380;product=30S ribosomal protein S6;protein_id=MDY4308132.1;transl_table=11 JAXGFV010000083.1 Genbank gene 1596 2117 . + . ID=gene-SNF32_16385;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=SNF32_16385 JAXGFV010000083.1 Protein Homology CDS 1596 2117 . + 0 ID=cds-MDY4308133.1;Parent=gene-SNF32_16385;Dbxref=NCBI_GP:MDY4308133.1;Name=MDY4308133.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010750861.1;locus_tag=SNF32_16385;product=single-stranded DNA-binding protein;protein_id=MDY4308133.1;transl_table=11 JAXGFV010000083.1 Genbank gene 2143 2379 . + . ID=gene-SNF32_16390;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=SNF32_16390 JAXGFV010000083.1 Protein Homology CDS 2143 2379 . + 0 ID=cds-MDY4308134.1;Parent=gene-SNF32_16390;Dbxref=NCBI_GP:MDY4308134.1;Name=MDY4308134.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002288370.1;locus_tag=SNF32_16390;product=30S ribosomal protein S18;protein_id=MDY4308134.1;transl_table=11 JAXGFV010000083.1 Genbank pseudogene 2560 4514 . + . ID=gene-SNF32_16395;Name=SNF32_16395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16395;pseudo=true JAXGFV010000083.1 Protein Homology CDS 2560 4514 . + 0 ID=cds-SNF32_16395;Parent=gene-SNF32_16395;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734554.1;locus_tag=SNF32_16395;product=DHH family phosphoesterase;pseudo=true;transl_table=11 JAXGFV010000083.1 Genbank pseudogene 4520 4970 . + . ID=gene-SNF32_16400;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=pseudogene;locus_tag=SNF32_16400;pseudo=true JAXGFV010000083.1 Protein Homology CDS 4520 4970 . + 0 ID=cds-SNF32_16400;Parent=gene-SNF32_16400;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002371936.1;locus_tag=SNF32_16400;product=50S ribosomal protein L9;pseudo=true;transl_table=11 JAXGFV010000083.1 Genbank pseudogene 5160 5512 . + . ID=gene-SNF32_16405;Name=SNF32_16405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16405;pseudo=true JAXGFV010000083.1 Protein Homology CDS 5160 5512 . + 0 ID=cds-SNF32_16405;Parent=gene-SNF32_16405;Note=frameshifted;Ontology_term=GO:0006260,GO:0003678,GO:0005524;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF012974.3;locus_tag=SNF32_16405;product=DnaB-like helicase N-terminal domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000083.1 Genbank pseudogene 5743 6542 . + . ID=gene-SNF32_16410;Name=SNF32_16410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16410;pseudo=true JAXGFV010000083.1 Protein Homology CDS 5743 6542 . + 0 ID=cds-SNF32_16410;Parent=gene-SNF32_16410;Note=frameshifted;Ontology_term=GO:0006260,GO:0003678,GO:0005524;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF015736.3;locus_tag=SNF32_16410;product=DnaB-like helicase C-terminal domain-containing protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000084.1 1 6488 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000084.1 Genbank region 1 6488 . + . ID=JAXGFV010000084.1:1..6488;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000084.1 Genbank gene 398 1894 . + . ID=gene-SNF32_16415;Name=SNF32_16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16415 JAXGFV010000084.1 GeneMarkS-2+ CDS 398 1894 . + 0 ID=cds-MDY4308135.1;Parent=gene-SNF32_16415;Dbxref=NCBI_GP:MDY4308135.1;Name=MDY4308135.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16415;product=hypothetical protein;protein_id=MDY4308135.1;transl_table=11 JAXGFV010000084.1 Genbank gene 1891 3069 . + . ID=gene-SNF32_16420;Name=SNF32_16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16420 JAXGFV010000084.1 GeneMarkS-2+ CDS 1891 3069 . + 0 ID=cds-MDY4308136.1;Parent=gene-SNF32_16420;Dbxref=NCBI_GP:MDY4308136.1;Name=MDY4308136.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16420;product=hypothetical protein;protein_id=MDY4308136.1;transl_table=11 JAXGFV010000084.1 Genbank pseudogene 3393 3673 . + . ID=gene-SNF32_16425;Name=SNF32_16425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16425;pseudo=true JAXGFV010000084.1 Protein Homology CDS 3393 3673 . + 0 ID=cds-SNF32_16425;Parent=gene-SNF32_16425;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003096262.1;locus_tag=SNF32_16425;product=PTS cellobiose transporter subunit IIB;pseudo=true;transl_table=11 JAXGFV010000084.1 Genbank pseudogene 3694 5666 . + . ID=gene-SNF32_16430;Name=SNF32_16430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16430;pseudo=true JAXGFV010000084.1 Protein Homology CDS 3694 5666 . + 0 ID=cds-SNF32_16430;Parent=gene-SNF32_16430;Note=frameshifted;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734144.1;locus_tag=SNF32_16430;product=PRD domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000084.1 Genbank pseudogene 5679 6025 . + . ID=gene-SNF32_16435;Name=SNF32_16435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16435;pseudo=true JAXGFV010000084.1 Protein Homology CDS 5679 6025 . + 0 ID=cds-SNF32_16435;Parent=gene-SNF32_16435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010780458.1;locus_tag=SNF32_16435;product=PTS cellobiose transporter subunit IIA;pseudo=true;transl_table=11 JAXGFV010000084.1 Genbank gene 6018 6488 . + . ID=gene-SNF32_16440;Name=SNF32_16440;end_range=6488,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16440;partial=true JAXGFV010000084.1 Protein Homology CDS 6018 6488 . + 0 ID=cds-MDY4308137.1;Parent=gene-SNF32_16440;Dbxref=NCBI_GP:MDY4308137.1;Name=MDY4308137.1;end_range=6488,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734146.1;locus_tag=SNF32_16440;partial=true;product=hypothetical protein;protein_id=MDY4308137.1;transl_table=11 ##sequence-region JAXGFV010000085.1 1 6091 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000085.1 Genbank region 1 6091 . + . ID=JAXGFV010000085.1:1..6091;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000085.1 Genbank pseudogene 105 659 . - . ID=gene-SNF32_16445;Name=SNF32_16445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16445;pseudo=true JAXGFV010000085.1 Protein Homology CDS 105 659 . - 0 ID=cds-SNF32_16445;Parent=gene-SNF32_16445;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002324998.1;locus_tag=SNF32_16445;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000085.1 Genbank pseudogene 913 2243 . + . ID=gene-SNF32_16450;Name=SNF32_16450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16450;pseudo=true JAXGFV010000085.1 Protein Homology CDS 913 2243 . + 0 ID=cds-SNF32_16450;Parent=gene-SNF32_16450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005879465.1;locus_tag=SNF32_16450;product=DUF1576 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000085.1 Genbank gene 2236 2547 . + . ID=gene-SNF32_16455;Name=SNF32_16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16455 JAXGFV010000085.1 Protein Homology CDS 2236 2547 . + 0 ID=cds-MDY4308138.1;Parent=gene-SNF32_16455;Dbxref=NCBI_GP:MDY4308138.1;Name=MDY4308138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005879463.1;locus_tag=SNF32_16455;product=hypothetical protein;protein_id=MDY4308138.1;transl_table=11 JAXGFV010000085.1 Genbank pseudogene 2752 3346 . + . ID=gene-SNF32_16460;Name=SNF32_16460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16460;pseudo=true JAXGFV010000085.1 Protein Homology CDS 2752 3346 . + 0 ID=cds-SNF32_16460;Parent=gene-SNF32_16460;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737813.1;locus_tag=SNF32_16460;product=VTT domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000085.1 Genbank pseudogene 3447 5238 . + . ID=gene-SNF32_16465;Name=SNF32_16465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16465;pseudo=true JAXGFV010000085.1 Protein Homology CDS 3447 5238 . + 0 ID=cds-SNF32_16465;Parent=gene-SNF32_16465;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002326703.1;locus_tag=SNF32_16465;product=glycerophosphodiester phosphodiesterase;pseudo=true;transl_table=11 JAXGFV010000085.1 Genbank gene 5833 5982 . + . ID=gene-SNF32_16470;Name=SNF32_16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16470 JAXGFV010000085.1 Protein Homology CDS 5833 5982 . + 0 ID=cds-MDY4308139.1;Parent=gene-SNF32_16470;Dbxref=NCBI_GP:MDY4308139.1;Name=MDY4308139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735118.1;locus_tag=SNF32_16470;product=hypothetical protein;protein_id=MDY4308139.1;transl_table=11 ##sequence-region JAXGFV010000086.1 1 5961 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000086.1 Genbank region 1 5961 . + . ID=JAXGFV010000086.1:1..5961;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000086.1 Genbank pseudogene 165 853 . - . ID=gene-SNF32_16475;Name=alsE;gbkey=Gene;gene=alsE;gene_biotype=pseudogene;locus_tag=SNF32_16475;pseudo=true JAXGFV010000086.1 Protein Homology CDS 165 853 . - 0 ID=cds-SNF32_16475;Parent=gene-SNF32_16475;Note=frameshifted;gbkey=CDS;gene=alsE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734017.1;locus_tag=SNF32_16475;product=D-allulose 6-phosphate 3-epimerase;pseudo=true;transl_table=11 JAXGFV010000086.1 Genbank pseudogene 854 1509 . - . ID=gene-SNF32_16480;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=pseudogene;locus_tag=SNF32_16480;pseudo=true JAXGFV010000086.1 Protein Homology CDS 854 1509 . - 0 ID=cds-SNF32_16480;Parent=gene-SNF32_16480;Note=frameshifted;Ontology_term=GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011102214.1;locus_tag=SNF32_16480;product=fructose-6-phosphate aldolase;pseudo=true;transl_table=11 JAXGFV010000086.1 Genbank gene 1537 2637 . - . ID=gene-SNF32_16485;Name=SNF32_16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16485 JAXGFV010000086.1 Protein Homology CDS 1537 2637 . - 0 ID=cds-MDY4308140.1;Parent=gene-SNF32_16485;Dbxref=NCBI_GP:MDY4308140.1;Name=MDY4308140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010720079.1;locus_tag=SNF32_16485;product=PTS fructose transporter subunit IIC;protein_id=MDY4308140.1;transl_table=11 JAXGFV010000086.1 Genbank pseudogene 2684 2973 . - . ID=gene-SNF32_16490;Name=SNF32_16490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16490;pseudo=true JAXGFV010000086.1 Protein Homology CDS 2684 2973 . - 0 ID=cds-SNF32_16490;Parent=gene-SNF32_16490;Note=frameshifted;Ontology_term=GO:0009401,GO:0016310,GO:0016301,GO:0022877,GO:0090563,GO:0090582;gbkey=CDS;go_function=kinase activity|0016301||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA,protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity|0090582||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002360370.1;locus_tag=SNF32_16490;product=PTS fructose transporter subunit IIB;pseudo=true;transl_table=11 JAXGFV010000086.1 Genbank gene 2993 3442 . - . ID=gene-SNF32_16495;Name=SNF32_16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16495 JAXGFV010000086.1 Protein Homology CDS 2993 3442 . - 0 ID=cds-MDY4308141.1;Parent=gene-SNF32_16495;Dbxref=NCBI_GP:MDY4308141.1;Name=MDY4308141.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008380951.1;locus_tag=SNF32_16495;product=fructose PTS transporter subunit IIA;protein_id=MDY4308141.1;transl_table=11 JAXGFV010000086.1 Genbank pseudogene 3458 3768 . - . ID=gene-SNF32_16500;Name=SNF32_16500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16500;pseudo=true JAXGFV010000086.1 Protein Homology CDS 3458 3768 . - 0 ID=cds-SNF32_16500;Parent=gene-SNF32_16500;Note=frameshifted;Ontology_term=GO:0009401,GO:0016310,GO:0016301,GO:0022877,GO:0090563,GO:0090582;gbkey=CDS;go_function=kinase activity|0016301||IEA,protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA,protein-phosphocysteine-sugar phosphotransferase activity|0090563||IEA,protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity|0090582||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734012.1;locus_tag=SNF32_16500;product=PTS fructose transporter subunit IIB;pseudo=true;transl_table=11 JAXGFV010000086.1 Genbank gene 3799 4209 . - . ID=gene-SNF32_16505;Name=SNF32_16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16505 JAXGFV010000086.1 Protein Homology CDS 3799 4209 . - 0 ID=cds-MDY4308142.1;Parent=gene-SNF32_16505;Dbxref=NCBI_GP:MDY4308142.1;Name=MDY4308142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734011.1;locus_tag=SNF32_16505;product=PTS sugar transporter subunit IIA;protein_id=MDY4308142.1;transl_table=11 JAXGFV010000086.1 Genbank pseudogene 4199 5680 . - . ID=gene-SNF32_16510;Name=SNF32_16510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16510;pseudo=true JAXGFV010000086.1 Protein Homology CDS 4199 5680 . - 0 ID=cds-SNF32_16510;Parent=gene-SNF32_16510;Note=frameshifted;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002365636.1;locus_tag=SNF32_16510;product=PRD domain-containing protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000087.1 1 5720 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000087.1 Genbank region 1 5720 . + . ID=JAXGFV010000087.1:1..5720;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000087.1 Genbank gene 1 481 . + . ID=gene-SNF32_16515;Name=SNF32_16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16515;partial=true;start_range=.,1 JAXGFV010000087.1 GeneMarkS-2+ CDS 1 481 . + 1 ID=cds-MDY4308143.1;Parent=gene-SNF32_16515;Dbxref=NCBI_GP:MDY4308143.1;Name=MDY4308143.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16515;partial=true;product=hypothetical protein;protein_id=MDY4308143.1;start_range=.,1;transl_table=11 JAXGFV010000087.1 Genbank gene 570 1154 . + . ID=gene-SNF32_16520;Name=SNF32_16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16520 JAXGFV010000087.1 Protein Homology CDS 570 1154 . + 0 ID=cds-MDY4308144.1;Parent=gene-SNF32_16520;Dbxref=NCBI_GP:MDY4308144.1;Name=MDY4308144.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019176.3;locus_tag=SNF32_16520;product=hypothetical protein;protein_id=MDY4308144.1;transl_table=11 JAXGFV010000087.1 Genbank pseudogene 1211 1321 . + . ID=gene-SNF32_16525;Name=SNF32_16525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16525;pseudo=true JAXGFV010000087.1 Protein Homology CDS 1211 1321 . + 0 ID=cds-SNF32_16525;Parent=gene-SNF32_16525;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019176.3;locus_tag=SNF32_16525;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000087.1 Genbank pseudogene 1471 1514 . + . ID=gene-SNF32_16530;Name=SNF32_16530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16530;pseudo=true JAXGFV010000087.1 Protein Homology CDS 1471 1514 . + 0 ID=cds-SNF32_16530;Parent=gene-SNF32_16530;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019176.3;locus_tag=SNF32_16530;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000087.1 Genbank gene 1624 2550 . + . ID=gene-SNF32_16535;Name=SNF32_16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16535 JAXGFV010000087.1 Protein Homology CDS 1624 2550 . + 0 ID=cds-MDY4308145.1;Parent=gene-SNF32_16535;Dbxref=NCBI_GP:MDY4308145.1;Name=MDY4308145.1;Ontology_term=GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;inference=COORDINATES: protein motif:HMM:NF013954.3;locus_tag=SNF32_16535;product=glucosaminidase domain-containing protein;protein_id=MDY4308145.1;transl_table=11 JAXGFV010000087.1 Genbank gene 2616 3776 . - . ID=gene-SNF32_16540;Name=SNF32_16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16540 JAXGFV010000087.1 Protein Homology CDS 2616 3776 . - 0 ID=cds-MDY4308146.1;Parent=gene-SNF32_16540;Dbxref=NCBI_GP:MDY4308146.1;Name=MDY4308146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723029.1;locus_tag=SNF32_16540;product=glycoside hydrolase family 73 protein;protein_id=MDY4308146.1;transl_table=11 JAXGFV010000087.1 Genbank pseudogene 4107 4951 . - . ID=gene-SNF32_16545;Name=SNF32_16545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16545;pseudo=true JAXGFV010000087.1 Protein Homology CDS 4107 4951 . - 0 ID=cds-SNF32_16545;Parent=gene-SNF32_16545;Note=frameshifted;Ontology_term=GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723028.1;locus_tag=SNF32_16545;product=SDR family oxidoreductase;pseudo=true;transl_table=11 JAXGFV010000087.1 Genbank pseudogene 5073 5538 . + . ID=gene-SNF32_16550;Name=SNF32_16550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16550;pseudo=true JAXGFV010000087.1 Protein Homology CDS 5073 5538 . + 0 ID=cds-SNF32_16550;Parent=gene-SNF32_16550;Note=frameshifted;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002332248.1;locus_tag=SNF32_16550;product=Rrf2 family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000088.1 1 5309 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000088.1 Genbank region 1 5309 . + . ID=JAXGFV010000088.1:1..5309;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000088.1 Genbank pseudogene 299 1753 . + . ID=gene-SNF32_16555;Name=SNF32_16555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16555;pseudo=true JAXGFV010000088.1 Protein Homology CDS 299 1753 . + 0 ID=cds-SNF32_16555;Parent=gene-SNF32_16555;Note=frameshifted;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002356538.1;locus_tag=SNF32_16555;product=nicotinate phosphoribosyltransferase;pseudo=true;transl_table=11 JAXGFV010000088.1 Genbank pseudogene 1780 2606 . + . ID=gene-SNF32_16560;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=pseudogene;locus_tag=SNF32_16560;pseudo=true JAXGFV010000088.1 Protein Homology CDS 1780 2606 . + 0 ID=cds-SNF32_16560;Parent=gene-SNF32_16560;Note=frameshifted;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002410267.1;locus_tag=SNF32_16560;product=ammonia-dependent NAD(+) synthetase;pseudo=true;transl_table=11 JAXGFV010000088.1 Genbank gene 2873 3070 . - . ID=gene-SNF32_16565;Name=SNF32_16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16565 JAXGFV010000088.1 Protein Homology CDS 2873 3070 . - 0 ID=cds-MDY4308147.1;Parent=gene-SNF32_16565;Dbxref=NCBI_GP:MDY4308147.1;Name=MDY4308147.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013228.3;locus_tag=SNF32_16565;product=Rid family hydrolase;protein_id=MDY4308147.1;transl_table=11 JAXGFV010000088.1 Genbank gene 3082 3210 . - . ID=gene-SNF32_16570;Name=SNF32_16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16570 JAXGFV010000088.1 GeneMarkS-2+ CDS 3082 3210 . - 0 ID=cds-MDY4308148.1;Parent=gene-SNF32_16570;Dbxref=NCBI_GP:MDY4308148.1;Name=MDY4308148.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16570;product=hypothetical protein;protein_id=MDY4308148.1;transl_table=11 JAXGFV010000088.1 Genbank pseudogene 3621 4506 . - . ID=gene-SNF32_16575;Name=SNF32_16575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16575;pseudo=true JAXGFV010000088.1 Protein Homology CDS 3621 4506 . - 0 ID=cds-SNF32_16575;Parent=gene-SNF32_16575;Note=frameshifted;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736676.1;locus_tag=SNF32_16575;product=ArsR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000088.1 Genbank gene 4708 5309 . + . ID=gene-SNF32_16580;Name=SNF32_16580;end_range=5309,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16580;partial=true JAXGFV010000088.1 Protein Homology CDS 4708 5309 . + 0 ID=cds-MDY4308149.1;Parent=gene-SNF32_16580;Dbxref=NCBI_GP:MDY4308149.1;Name=MDY4308149.1;end_range=5309,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002343980.1;locus_tag=SNF32_16580;partial=true;product=alpha-N-arabinofuranosidase;protein_id=MDY4308149.1;transl_table=11 ##sequence-region JAXGFV010000089.1 1 5270 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000089.1 Genbank region 1 5270 . + . ID=JAXGFV010000089.1:1..5270;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000089.1 Genbank pseudogene 187 1827 . - . ID=gene-SNF32_16585;Name=SNF32_16585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16585;pseudo=true JAXGFV010000089.1 Protein Homology CDS 187 1827 . - 0 ID=cds-SNF32_16585;Parent=gene-SNF32_16585;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016632060.1;locus_tag=SNF32_16585;product=DNA mismatch repair protein MutS;pseudo=true;transl_table=11 JAXGFV010000089.1 Genbank gene 2110 2532 . - . ID=gene-SNF32_16590;Name=SNF32_16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16590 JAXGFV010000089.1 GeneMarkS-2+ CDS 2110 2532 . - 0 ID=cds-MDY4308150.1;Parent=gene-SNF32_16590;Dbxref=NCBI_GP:MDY4308150.1;Name=MDY4308150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16590;product=hypothetical protein;protein_id=MDY4308150.1;transl_table=11 JAXGFV010000089.1 Genbank gene 2574 2756 . - . ID=gene-SNF32_16595;Name=SNF32_16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16595 JAXGFV010000089.1 GeneMarkS-2+ CDS 2574 2756 . - 0 ID=cds-MDY4308151.1;Parent=gene-SNF32_16595;Dbxref=NCBI_GP:MDY4308151.1;Name=MDY4308151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16595;product=hypothetical protein;protein_id=MDY4308151.1;transl_table=11 JAXGFV010000089.1 Genbank gene 2734 3183 . - . ID=gene-SNF32_16600;Name=SNF32_16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16600 JAXGFV010000089.1 Protein Homology CDS 2734 3183 . - 0 ID=cds-MDY4308152.1;Parent=gene-SNF32_16600;Dbxref=NCBI_GP:MDY4308152.1;Name=MDY4308152.1;Ontology_term=GO:0005975,GO:0016301,GO:0016773;gbkey=CDS;go_function=kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF014801.3;locus_tag=SNF32_16600;product=FGGY-family carbohydrate kinase;protein_id=MDY4308152.1;transl_table=11 JAXGFV010000089.1 Genbank gene 3174 3800 . - . ID=gene-SNF32_16605;Name=SNF32_16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16605 JAXGFV010000089.1 Protein Homology CDS 3174 3800 . - 0 ID=cds-MDY4308153.1;Parent=gene-SNF32_16605;Dbxref=NCBI_GP:MDY4308153.1;Name=MDY4308153.1;Ontology_term=GO:0005975,GO:0016301,GO:0016773;gbkey=CDS;go_function=kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF012589.3;locus_tag=SNF32_16605;product=FGGY family carbohydrate kinase;protein_id=MDY4308153.1;transl_table=11 JAXGFV010000089.1 Genbank gene 3776 4105 . - . ID=gene-SNF32_16610;Name=SNF32_16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16610 JAXGFV010000089.1 Protein Homology CDS 3776 4105 . - 0 ID=cds-MDY4308154.1;Parent=gene-SNF32_16610;Dbxref=NCBI_GP:MDY4308154.1;Name=MDY4308154.1;Ontology_term=GO:0005975,GO:0016301,GO:0016773;gbkey=CDS;go_function=kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF012589.3;locus_tag=SNF32_16610;product=FGGY family carbohydrate kinase;protein_id=MDY4308154.1;transl_table=11 JAXGFV010000089.1 Genbank pseudogene 4147 5164 . - . ID=gene-SNF32_16615;Name=SNF32_16615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16615;pseudo=true JAXGFV010000089.1 Protein Homology CDS 4147 5164 . - 0 ID=cds-SNF32_16615;Parent=gene-SNF32_16615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002323515.1;locus_tag=SNF32_16615;product=sugar ABC transporter substrate-binding protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000009.1 1 78289 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000009.1 Genbank region 1 78289 . + . ID=JAXGFV010000009.1:1..78289;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000009.1 Genbank pseudogene 113 1503 . - . ID=gene-SNF32_06180;Name=SNF32_06180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06180;pseudo=true JAXGFV010000009.1 Protein Homology CDS 113 1503 . - 0 ID=cds-SNF32_06180;Parent=gene-SNF32_06180;Note=frameshifted;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005879894.1;locus_tag=SNF32_06180;product=L-cystine transporter;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 1709 2112 . - . ID=gene-SNF32_06185;Name=SNF32_06185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06185;pseudo=true JAXGFV010000009.1 Protein Homology CDS 1709 2112 . - 0 ID=cds-SNF32_06185;Parent=gene-SNF32_06185;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724590.1;locus_tag=SNF32_06185;product=DUF1149 family protein;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 2165 2783 . - . ID=gene-SNF32_06190;Name=SNF32_06190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06190;pseudo=true JAXGFV010000009.1 Protein Homology CDS 2165 2783 . - 0 ID=cds-SNF32_06190;Parent=gene-SNF32_06190;Note=frameshifted;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002306550.1;locus_tag=SNF32_06190;product=HAD-IA family hydrolase;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank gene 2878 3258 . - . ID=gene-SNF32_06195;Name=SNF32_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06195 JAXGFV010000009.1 GeneMarkS-2+ CDS 2878 3258 . - 0 ID=cds-MDY4307111.1;Parent=gene-SNF32_06195;Dbxref=NCBI_GP:MDY4307111.1;Name=MDY4307111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06195;product=hypothetical protein;protein_id=MDY4307111.1;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 3324 3962 . - . ID=gene-SNF32_06200;Name=SNF32_06200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06200;pseudo=true JAXGFV010000009.1 Protein Homology CDS 3324 3962 . - 0 ID=cds-SNF32_06200;Parent=gene-SNF32_06200;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010751997.1;locus_tag=SNF32_06200;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank gene 4279 4659 . - . ID=gene-SNF32_06205;Name=SNF32_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06205 JAXGFV010000009.1 GeneMarkS-2+ CDS 4279 4659 . - 0 ID=cds-MDY4307112.1;Parent=gene-SNF32_06205;Dbxref=NCBI_GP:MDY4307112.1;Name=MDY4307112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06205;product=hypothetical protein;protein_id=MDY4307112.1;transl_table=11 JAXGFV010000009.1 Genbank gene 4849 5118 . - . ID=gene-SNF32_06210;Name=SNF32_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06210 JAXGFV010000009.1 GeneMarkS-2+ CDS 4849 5118 . - 0 ID=cds-MDY4307113.1;Parent=gene-SNF32_06210;Dbxref=NCBI_GP:MDY4307113.1;Name=MDY4307113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06210;product=hypothetical protein;protein_id=MDY4307113.1;transl_table=11 JAXGFV010000009.1 Genbank gene 5698 6072 . - . ID=gene-SNF32_06215;Name=SNF32_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06215 JAXGFV010000009.1 Protein Homology CDS 5698 6072 . - 0 ID=cds-MDY4307114.1;Parent=gene-SNF32_06215;Dbxref=NCBI_GP:MDY4307114.1;Name=MDY4307114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735288.1;locus_tag=SNF32_06215;product=P-II family nitrogen regulator;protein_id=MDY4307114.1;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 6065 6833 . - . ID=gene-SNF32_06220;Name=SNF32_06220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06220;pseudo=true JAXGFV010000009.1 Protein Homology CDS 6065 6833 . - 0 ID=cds-SNF32_06220;Parent=gene-SNF32_06220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010753785.1;locus_tag=SNF32_06220;product=DUF1538 domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank gene 6834 7481 . - . ID=gene-SNF32_06225;Name=SNF32_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06225 JAXGFV010000009.1 Protein Homology CDS 6834 7481 . - 0 ID=cds-MDY4307115.1;Parent=gene-SNF32_06225;Dbxref=NCBI_GP:MDY4307115.1;Name=MDY4307115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005879910.1;locus_tag=SNF32_06225;product=DUF1538 domain-containing protein;protein_id=MDY4307115.1;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 7871 8700 . - . ID=gene-SNF32_06230;Name=SNF32_06230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06230;pseudo=true JAXGFV010000009.1 Protein Homology CDS 7871 8700 . - 0 ID=cds-SNF32_06230;Parent=gene-SNF32_06230;Note=frameshifted;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002305635.1;locus_tag=SNF32_06230;product=carbohydrate ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 8744 9612 . - . ID=gene-SNF32_06235;Name=SNF32_06235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06235;pseudo=true JAXGFV010000009.1 Protein Homology CDS 8744 9612 . - 0 ID=cds-SNF32_06235;Parent=gene-SNF32_06235;Note=frameshifted;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016628995.1;locus_tag=SNF32_06235;product=sugar ABC transporter permease;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 9967 11252 . - . ID=gene-SNF32_06240;Name=SNF32_06240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06240;pseudo=true JAXGFV010000009.1 Protein Homology CDS 9967 11252 . - 0 ID=cds-SNF32_06240;Parent=gene-SNF32_06240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002374522.1;locus_tag=SNF32_06240;product=extracellular solute-binding protein;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank gene 11476 11889 . + . ID=gene-SNF32_06245;Name=SNF32_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06245 JAXGFV010000009.1 Protein Homology CDS 11476 11889 . + 0 ID=cds-MDY4307116.1;Parent=gene-SNF32_06245;Dbxref=NCBI_GP:MDY4307116.1;Name=MDY4307116.1;Ontology_term=GO:0000160,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002326953.1;locus_tag=SNF32_06245;product=response regulator;protein_id=MDY4307116.1;transl_table=11 JAXGFV010000009.1 Genbank gene 12023 12526 . + . ID=gene-SNF32_06250;Name=SNF32_06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06250 JAXGFV010000009.1 GeneMarkS-2+ CDS 12023 12526 . + 0 ID=cds-MDY4307117.1;Parent=gene-SNF32_06250;Dbxref=NCBI_GP:MDY4307117.1;Name=MDY4307117.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06250;product=hypothetical protein;protein_id=MDY4307117.1;transl_table=11 JAXGFV010000009.1 Genbank gene 12523 12801 . + . ID=gene-SNF32_06255;Name=SNF32_06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06255 JAXGFV010000009.1 GeneMarkS-2+ CDS 12523 12801 . + 0 ID=cds-MDY4307118.1;Parent=gene-SNF32_06255;Dbxref=NCBI_GP:MDY4307118.1;Name=MDY4307118.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06255;product=hypothetical protein;protein_id=MDY4307118.1;transl_table=11 JAXGFV010000009.1 Genbank gene 12830 12970 . + . ID=gene-SNF32_06260;Name=SNF32_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06260 JAXGFV010000009.1 Protein Homology CDS 12830 12970 . + 0 ID=cds-MDY4307119.1;Parent=gene-SNF32_06260;Dbxref=NCBI_GP:MDY4307119.1;Name=MDY4307119.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.3;locus_tag=SNF32_06260;product=AraC family transcriptional regulator;protein_id=MDY4307119.1;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 12967 14744 . + . ID=gene-SNF32_06265;Name=SNF32_06265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06265;pseudo=true JAXGFV010000009.1 Protein Homology CDS 12967 14744 . + 0 ID=cds-SNF32_06265;Parent=gene-SNF32_06265;Note=frameshifted;Ontology_term=GO:0000160,GO:0000155,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002324964.1;locus_tag=SNF32_06265;product=histidine kinase;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank gene 14835 15788 . - . ID=gene-SNF32_06270;Name=SNF32_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06270 JAXGFV010000009.1 Protein Homology CDS 14835 15788 . - 0 ID=cds-MDY4307120.1;Parent=gene-SNF32_06270;Dbxref=NCBI_GP:MDY4307120.1;Name=MDY4307120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735280.1;locus_tag=SNF32_06270;product=beta-galactosidase small subunit;protein_id=MDY4307120.1;transl_table=11 JAXGFV010000009.1 Genbank gene 15769 16401 . - . ID=gene-SNF32_06275;Name=SNF32_06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06275 JAXGFV010000009.1 Protein Homology CDS 15769 16401 . - 0 ID=cds-MDY4307121.1;Parent=gene-SNF32_06275;Dbxref=NCBI_GP:MDY4307121.1;Name=MDY4307121.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF014850.3;locus_tag=SNF32_06275;product=glycoside hydrolase family 2 TIM barrel-domain containing protein;protein_id=MDY4307121.1;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 16326 16951 . - . ID=gene-SNF32_06280;Name=SNF32_06280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06280;pseudo=true JAXGFV010000009.1 Protein Homology CDS 16326 16951 . - 0 ID=cds-SNF32_06280;Parent=gene-SNF32_06280;Note=frameshifted;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF014850.3;locus_tag=SNF32_06280;product=glycoside hydrolase family 2 TIM barrel-domain containing protein;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank gene 16981 17643 . - . ID=gene-SNF32_06285;Name=SNF32_06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06285 JAXGFV010000009.1 Protein Homology CDS 16981 17643 . - 0 ID=cds-MDY4307122.1;Parent=gene-SNF32_06285;Dbxref=NCBI_GP:MDY4307122.1;Name=MDY4307122.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014851.3;locus_tag=SNF32_06285;product=beta galactosidase jelly roll domain-containing protein;protein_id=MDY4307122.1;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 17627 19856 . - . ID=gene-SNF32_06290;Name=SNF32_06290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06290;pseudo=true JAXGFV010000009.1 Protein Homology CDS 17627 19856 . - 0 ID=cds-SNF32_06290;Parent=gene-SNF32_06290;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723380.1;locus_tag=SNF32_06290;product=alpha-galactosidase;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 19969 20995 . + . ID=gene-SNF32_06295;Name=SNF32_06295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06295;pseudo=true JAXGFV010000009.1 Protein Homology CDS 19969 20995 . + 0 ID=cds-SNF32_06295;Parent=gene-SNF32_06295;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723379.1;locus_tag=SNF32_06295;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 21417 22545 . - . ID=gene-SNF32_06300;Name=SNF32_06300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06300;pseudo=true JAXGFV010000009.1 Protein Homology CDS 21417 22545 . - 0 ID=cds-SNF32_06300;Parent=gene-SNF32_06300;Note=frameshifted;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735276.1;locus_tag=SNF32_06300;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;pseudo=true;transl_table=11 JAXGFV010000009.1 cmsearch binding_site 22627 22857 . - . ID=id-JAXGFV010000009.1:22627..22857;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.4 JAXGFV010000009.1 Genbank gene 22903 23025 . - . ID=gene-SNF32_06305;Name=SNF32_06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06305 JAXGFV010000009.1 GeneMarkS-2+ CDS 22903 23025 . - 0 ID=cds-MDY4307123.1;Parent=gene-SNF32_06305;Dbxref=NCBI_GP:MDY4307123.1;Name=MDY4307123.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06305;product=hypothetical protein;protein_id=MDY4307123.1;transl_table=11 JAXGFV010000009.1 Genbank gene 23470 23661 . - . ID=gene-SNF32_06310;Name=SNF32_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06310 JAXGFV010000009.1 Protein Homology CDS 23470 23661 . - 0 ID=cds-MDY4307124.1;Parent=gene-SNF32_06310;Dbxref=NCBI_GP:MDY4307124.1;Name=MDY4307124.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024139.3;locus_tag=SNF32_06310;product=MerR family DNA-binding transcriptional regulator;protein_id=MDY4307124.1;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 23764 25504 . + . ID=gene-SNF32_06315;Name=SNF32_06315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06315;pseudo=true JAXGFV010000009.1 Protein Homology CDS 23764 25504 . + 0 ID=cds-SNF32_06315;Parent=gene-SNF32_06315;Note=frameshifted;Ontology_term=GO:0005524,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735274.1;locus_tag=SNF32_06315;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 25544 27274 . + . ID=gene-SNF32_06320;Name=SNF32_06320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06320;pseudo=true JAXGFV010000009.1 Protein Homology CDS 25544 27274 . + 0 ID=cds-SNF32_06320;Parent=gene-SNF32_06320;Note=frameshifted;Ontology_term=GO:0005524,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002359873.1;locus_tag=SNF32_06320;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank gene 27290 27967 . - . ID=gene-SNF32_06325;Name=SNF32_06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06325 JAXGFV010000009.1 Protein Homology CDS 27290 27967 . - 0 ID=cds-MDY4307125.1;Parent=gene-SNF32_06325;Dbxref=NCBI_GP:MDY4307125.1;Name=MDY4307125.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019161.3;locus_tag=SNF32_06325;product=bacterial Ig-like domain-containing protein;protein_id=MDY4307125.1;transl_table=11 JAXGFV010000009.1 Genbank gene 28011 28886 . - . ID=gene-SNF32_06330;Name=SNF32_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06330 JAXGFV010000009.1 Protein Homology CDS 28011 28886 . - 0 ID=cds-MDY4307126.1;Parent=gene-SNF32_06330;Dbxref=NCBI_GP:MDY4307126.1;Name=MDY4307126.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019161.3;locus_tag=SNF32_06330;product=bacterial Ig-like domain-containing protein;protein_id=MDY4307126.1;transl_table=11 JAXGFV010000009.1 Genbank gene 29095 29733 . - . ID=gene-SNF32_06335;Name=SNF32_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06335 JAXGFV010000009.1 Protein Homology CDS 29095 29733 . - 0 ID=cds-MDY4307127.1;Parent=gene-SNF32_06335;Dbxref=NCBI_GP:MDY4307127.1;Name=MDY4307127.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024702.3;locus_tag=SNF32_06335;product=BspA family leucine-rich repeat surface protein;protein_id=MDY4307127.1;transl_table=11 JAXGFV010000009.1 Genbank gene 29765 30322 . - . ID=gene-SNF32_06340;Name=SNF32_06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06340 JAXGFV010000009.1 GeneMarkS-2+ CDS 29765 30322 . - 0 ID=cds-MDY4307128.1;Parent=gene-SNF32_06340;Dbxref=NCBI_GP:MDY4307128.1;Name=MDY4307128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06340;product=hypothetical protein;protein_id=MDY4307128.1;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 30529 31277 . + . ID=gene-SNF32_06345;Name=SNF32_06345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06345;pseudo=true JAXGFV010000009.1 Protein Homology CDS 30529 31277 . + 0 ID=cds-SNF32_06345;Parent=gene-SNF32_06345;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016901.3;locus_tag=SNF32_06345;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank gene 31495 32016 . + . ID=gene-SNF32_06350;Name=SNF32_06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06350 JAXGFV010000009.1 GeneMarkS-2+ CDS 31495 32016 . + 0 ID=cds-MDY4307129.1;Parent=gene-SNF32_06350;Dbxref=NCBI_GP:MDY4307129.1;Name=MDY4307129.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06350;product=hypothetical protein;protein_id=MDY4307129.1;transl_table=11 JAXGFV010000009.1 Genbank gene 33578 33721 . - . ID=gene-SNF32_06355;Name=SNF32_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06355 JAXGFV010000009.1 GeneMarkS-2+ CDS 33578 33721 . - 0 ID=cds-MDY4307130.1;Parent=gene-SNF32_06355;Dbxref=NCBI_GP:MDY4307130.1;Name=MDY4307130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06355;product=hypothetical protein;protein_id=MDY4307130.1;transl_table=11 JAXGFV010000009.1 Genbank gene 34328 34783 . - . ID=gene-SNF32_06360;Name=SNF32_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06360 JAXGFV010000009.1 Protein Homology CDS 34328 34783 . - 0 ID=cds-MDY4307131.1;Parent=gene-SNF32_06360;Dbxref=NCBI_GP:MDY4307131.1;Name=MDY4307131.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: protein motif:HMM:NF024898.3;locus_tag=SNF32_06360;product=GNAT family N-acetyltransferase;protein_id=MDY4307131.1;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 35165 36527 . - . ID=gene-SNF32_06365;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=pseudogene;locus_tag=SNF32_06365;pseudo=true JAXGFV010000009.1 Protein Homology CDS 35165 36527 . - 0 ID=cds-SNF32_06365;Parent=gene-SNF32_06365;Note=frameshifted;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735266.1;locus_tag=SNF32_06365;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 36690 37747 . - . ID=gene-SNF32_06370;Name=SNF32_06370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06370;pseudo=true JAXGFV010000009.1 Protein Homology CDS 36690 37747 . - 0 ID=cds-SNF32_06370;Parent=gene-SNF32_06370;Note=frameshifted;Ontology_term=GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735265.1;locus_tag=SNF32_06370;product=diacylglycerol kinase;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 37744 39172 . - . ID=gene-SNF32_06375;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=pseudogene;locus_tag=SNF32_06375;pseudo=true JAXGFV010000009.1 Protein Homology CDS 37744 39172 . - 0 ID=cds-SNF32_06375;Parent=gene-SNF32_06375;Note=frameshifted;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735264.1;locus_tag=SNF32_06375;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 39169 40639 . - . ID=gene-SNF32_06380;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=pseudogene;locus_tag=SNF32_06380;pseudo=true JAXGFV010000009.1 Protein Homology CDS 39169 40639 . - 0 ID=cds-SNF32_06380;Parent=gene-SNF32_06380;Note=frameshifted;Ontology_term=GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016631886.1;locus_tag=SNF32_06380;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank gene 40639 40944 . - . ID=gene-SNF32_06385;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=SNF32_06385 JAXGFV010000009.1 Protein Homology CDS 40639 40944 . - 0 ID=cds-MDY4307132.1;Parent=gene-SNF32_06385;Dbxref=NCBI_GP:MDY4307132.1;Name=MDY4307132.1;Ontology_term=GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002378010.1;locus_tag=SNF32_06385;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=MDY4307132.1;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 41037 43076 . - . ID=gene-SNF32_06390;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=pseudogene;locus_tag=SNF32_06390;pseudo=true JAXGFV010000009.1 Protein Homology CDS 41037 43076 . - 0 ID=cds-SNF32_06390;Parent=gene-SNF32_06390;Note=frameshifted;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735261.1;locus_tag=SNF32_06390;product=NAD-dependent DNA ligase LigA;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 43097 45336 . - . ID=gene-SNF32_06395;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=pseudogene;locus_tag=SNF32_06395;pseudo=true JAXGFV010000009.1 Protein Homology CDS 43097 45336 . - 0 ID=cds-SNF32_06395;Parent=gene-SNF32_06395;Note=frameshifted;Ontology_term=GO:0006268,GO:0006281,GO:0003678;gbkey=CDS;gene=pcrA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010752025.1;locus_tag=SNF32_06395;product=DNA helicase PcrA;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 45935 47865 . - . ID=gene-SNF32_06400;Name=SNF32_06400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06400;pseudo=true JAXGFV010000009.1 Protein Homology CDS 45935 47865 . - 0 ID=cds-SNF32_06400;Parent=gene-SNF32_06400;Note=frameshifted;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735259.1;locus_tag=SNF32_06400;product=fructose-specific PTS transporter subunit EIIC;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank gene 47884 48798 . - . ID=gene-SNF32_06405;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=SNF32_06405 JAXGFV010000009.1 Protein Homology CDS 47884 48798 . - 0 ID=cds-MDY4307133.1;Parent=gene-SNF32_06405;Dbxref=NCBI_GP:MDY4307133.1;Name=MDY4307133.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002288484.1;locus_tag=SNF32_06405;product=1-phosphofructokinase;protein_id=MDY4307133.1;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 48795 49545 . - . ID=gene-SNF32_06410;Name=SNF32_06410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06410;pseudo=true JAXGFV010000009.1 Protein Homology CDS 48795 49545 . - 0 ID=cds-SNF32_06410;Parent=gene-SNF32_06410;Note=frameshifted;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002288485.1;locus_tag=SNF32_06410;product=DeoR/GlpR family DNA-binding transcription regulator;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank gene 49844 50218 . - . ID=gene-SNF32_06415;Name=SNF32_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06415 JAXGFV010000009.1 GeneMarkS-2+ CDS 49844 50218 . - 0 ID=cds-MDY4307134.1;Parent=gene-SNF32_06415;Dbxref=NCBI_GP:MDY4307134.1;Name=MDY4307134.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06415;product=hypothetical protein;protein_id=MDY4307134.1;transl_table=11 JAXGFV010000009.1 Genbank gene 50175 50510 . - . ID=gene-SNF32_06420;Name=SNF32_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06420 JAXGFV010000009.1 GeneMarkS-2+ CDS 50175 50510 . - 0 ID=cds-MDY4307135.1;Parent=gene-SNF32_06420;Dbxref=NCBI_GP:MDY4307135.1;Name=MDY4307135.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06420;product=hypothetical protein;protein_id=MDY4307135.1;transl_table=11 JAXGFV010000009.1 Genbank gene 50961 51098 . - . ID=gene-SNF32_06425;Name=SNF32_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06425 JAXGFV010000009.1 GeneMarkS-2+ CDS 50961 51098 . - 0 ID=cds-MDY4307136.1;Parent=gene-SNF32_06425;Dbxref=NCBI_GP:MDY4307136.1;Name=MDY4307136.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06425;product=hypothetical protein;protein_id=MDY4307136.1;transl_table=11 JAXGFV010000009.1 Genbank gene 51241 51351 . + . ID=gene-SNF32_06430;Name=SNF32_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06430 JAXGFV010000009.1 Protein Homology CDS 51241 51351 . + 0 ID=cds-MDY4307137.1;Parent=gene-SNF32_06430;Dbxref=NCBI_GP:MDY4307137.1;Name=MDY4307137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002288488.1;locus_tag=SNF32_06430;product=SPJ_0845 family protein;protein_id=MDY4307137.1;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 51461 52047 . - . ID=gene-SNF32_06435;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=pseudogene;locus_tag=SNF32_06435;pseudo=true JAXGFV010000009.1 Protein Homology CDS 51461 52047 . - 0 ID=cds-SNF32_06435;Parent=gene-SNF32_06435;Note=frameshifted;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005879997.1;locus_tag=SNF32_06435;product=ribosome biogenesis GTP-binding protein YihA/YsxC;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 52171 53405 . - . ID=gene-SNF32_06440;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=pseudogene;locus_tag=SNF32_06440;pseudo=true JAXGFV010000009.1 Protein Homology CDS 52171 53405 . - 0 ID=cds-SNF32_06440;Parent=gene-SNF32_06440;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002400278.1;locus_tag=SNF32_06440;product=ATP-dependent Clp protease ATP-binding subunit ClpX;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 53592 54864 . - . ID=gene-SNF32_06445;Name=tig;gbkey=Gene;gene=tig;gene_biotype=pseudogene;locus_tag=SNF32_06445;pseudo=true JAXGFV010000009.1 Protein Homology CDS 53592 54864 . - 0 ID=cds-SNF32_06445;Parent=gene-SNF32_06445;Note=frameshifted;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002323981.1;locus_tag=SNF32_06445;product=trigger factor;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank gene 55055 55960 . - . ID=gene-SNF32_06450;Name=SNF32_06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06450 JAXGFV010000009.1 Protein Homology CDS 55055 55960 . - 0 ID=cds-MDY4307138.1;Parent=gene-SNF32_06450;Dbxref=NCBI_GP:MDY4307138.1;Name=MDY4307138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002292071.1;locus_tag=SNF32_06450;product=hypothetical protein;protein_id=MDY4307138.1;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 56049 56612 . - . ID=gene-SNF32_06455;Name=SNF32_06455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06455;pseudo=true JAXGFV010000009.1 Protein Homology CDS 56049 56612 . - 0 ID=cds-SNF32_06455;Parent=gene-SNF32_06455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014124856.1;locus_tag=SNF32_06455;product=RDD family protein;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 56909 57932 . - . ID=gene-SNF32_06460;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=pseudogene;locus_tag=SNF32_06460;pseudo=true JAXGFV010000009.1 Protein Homology CDS 56909 57932 . - 0 ID=cds-SNF32_06460;Parent=gene-SNF32_06460;Note=frameshifted;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=sppA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002337680.1;locus_tag=SNF32_06460;product=signal peptide peptidase SppA;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 57944 58232 . - . ID=gene-SNF32_06465;Name=SNF32_06465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06465;pseudo=true JAXGFV010000009.1 Protein Homology CDS 57944 58232 . - 0 ID=cds-SNF32_06465;Parent=gene-SNF32_06465;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002292074.1;locus_tag=SNF32_06465;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 58622 60428 . + . ID=gene-SNF32_06470;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=pseudogene;locus_tag=SNF32_06470;pseudo=true JAXGFV010000009.1 Protein Homology CDS 58622 60428 . + 0 ID=cds-SNF32_06470;Parent=gene-SNF32_06470;Note=frameshifted;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008267074.1;locus_tag=SNF32_06470;product=glutamine--fructose-6-phosphate transaminase (isomerizing);pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank gene 60524 61282 . - . ID=gene-SNF32_06475;Name=SNF32_06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06475 JAXGFV010000009.1 Protein Homology CDS 60524 61282 . - 0 ID=cds-MDY4307139.1;Parent=gene-SNF32_06475;Dbxref=NCBI_GP:MDY4307139.1;Name=MDY4307139.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735246.1;locus_tag=SNF32_06475;product=ABC transporter permease;protein_id=MDY4307139.1;transl_table=11 JAXGFV010000009.1 Genbank gene 61283 61429 . - . ID=gene-SNF32_06480;Name=SNF32_06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06480 JAXGFV010000009.1 Protein Homology CDS 61283 61429 . - 0 ID=cds-MDY4307140.1;Parent=gene-SNF32_06480;Dbxref=NCBI_GP:MDY4307140.1;Name=MDY4307140.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025109.3;locus_tag=SNF32_06480;product=hypothetical protein;protein_id=MDY4307140.1;transl_table=11 JAXGFV010000009.1 Genbank gene 61426 61644 . - . ID=gene-SNF32_06485;Name=SNF32_06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06485 JAXGFV010000009.1 GeneMarkS-2+ CDS 61426 61644 . - 0 ID=cds-MDY4307141.1;Parent=gene-SNF32_06485;Dbxref=NCBI_GP:MDY4307141.1;Name=MDY4307141.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06485;product=hypothetical protein;protein_id=MDY4307141.1;transl_table=11 JAXGFV010000009.1 Genbank gene 61641 62111 . - . ID=gene-SNF32_06490;Name=SNF32_06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06490 JAXGFV010000009.1 Protein Homology CDS 61641 62111 . - 0 ID=cds-MDY4307142.1;Parent=gene-SNF32_06490;Dbxref=NCBI_GP:MDY4307142.1;Name=MDY4307142.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.3;locus_tag=SNF32_06490;product=ATP-binding cassette domain-containing protein;protein_id=MDY4307142.1;transl_table=11 JAXGFV010000009.1 Genbank gene 62302 62745 . + . ID=gene-SNF32_06495;Name=SNF32_06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06495 JAXGFV010000009.1 GeneMarkS-2+ CDS 62302 62745 . + 0 ID=cds-MDY4307143.1;Parent=gene-SNF32_06495;Dbxref=NCBI_GP:MDY4307143.1;Name=MDY4307143.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06495;product=helix-turn-helix transcriptional regulator;protein_id=MDY4307143.1;transl_table=11 JAXGFV010000009.1 Genbank gene 62766 63242 . + . ID=gene-SNF32_06500;Name=SNF32_06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06500 JAXGFV010000009.1 Protein Homology CDS 62766 63242 . + 0 ID=cds-MDY4307144.1;Parent=gene-SNF32_06500;Dbxref=NCBI_GP:MDY4307144.1;Name=MDY4307144.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01716.1;locus_tag=SNF32_06500;product=hypothetical protein;protein_id=MDY4307144.1;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 63332 64683 . - . ID=gene-SNF32_06505;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=pseudogene;locus_tag=SNF32_06505;pseudo=true JAXGFV010000009.1 Protein Homology CDS 63332 64683 . - 0 ID=cds-SNF32_06505;Parent=gene-SNF32_06505;Note=frameshifted;Ontology_term=GO:0009103,GO:0009252,GO:0008966;gbkey=CDS;gene=glmM;go_function=phosphoglucosamine mutase activity|0008966||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010739004.1;locus_tag=SNF32_06505;product=phosphoglucosamine mutase;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 64707 65881 . - . ID=gene-SNF32_06510;Name=SNF32_06510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06510;pseudo=true JAXGFV010000009.1 Protein Homology CDS 64707 65881 . - 0 ID=cds-SNF32_06510;Parent=gene-SNF32_06510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010738803.1;locus_tag=SNF32_06510;product=CdaR family protein;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 65878 66759 . - . ID=gene-SNF32_06515;Name=cdaA;gbkey=Gene;gene=cdaA;gene_biotype=pseudogene;locus_tag=SNF32_06515;pseudo=true JAXGFV010000009.1 Protein Homology CDS 65878 66759 . - 0 ID=cds-SNF32_06515;Parent=gene-SNF32_06515;Note=frameshifted;Ontology_term=GO:0004016;gbkey=CDS;gene=cdaA;go_function=adenylate cyclase activity|0004016||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005880019.1;locus_tag=SNF32_06515;product=diadenylate cyclase CdaA;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 66929 70594 . - . ID=gene-SNF32_06520;Name=nifJ;gbkey=Gene;gene=nifJ;gene_biotype=pseudogene;locus_tag=SNF32_06520;pseudo=true JAXGFV010000009.1 Protein Homology CDS 66929 70594 . - 0 ID=cds-SNF32_06520;Parent=gene-SNF32_06520;Note=frameshifted;Ontology_term=GO:0022900,GO:0005506,GO:0016903,GO:0030976;gbkey=CDS;gene=nifJ;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors|0016903||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735240.1;locus_tag=SNF32_06520;product=pyruvate:ferredoxin (flavodoxin) oxidoreductase;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank gene 70884 71399 . + . ID=gene-SNF32_06525;Name=SNF32_06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06525 JAXGFV010000009.1 Protein Homology CDS 70884 71399 . + 0 ID=cds-MDY4307145.1;Parent=gene-SNF32_06525;Dbxref=NCBI_GP:MDY4307145.1;Name=MDY4307145.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735239.1;locus_tag=SNF32_06525;product=DsbA family protein;protein_id=MDY4307145.1;transl_table=11 JAXGFV010000009.1 Genbank gene 71475 71612 . - . ID=gene-SNF32_06530;Name=SNF32_06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06530 JAXGFV010000009.1 GeneMarkS-2+ CDS 71475 71612 . - 0 ID=cds-MDY4307146.1;Parent=gene-SNF32_06530;Dbxref=NCBI_GP:MDY4307146.1;Name=MDY4307146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06530;product=hypothetical protein;protein_id=MDY4307146.1;transl_table=11 JAXGFV010000009.1 Genbank gene 71922 72131 . - . ID=gene-SNF32_06535;Name=SNF32_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06535 JAXGFV010000009.1 GeneMarkS-2+ CDS 71922 72131 . - 0 ID=cds-MDY4307147.1;Parent=gene-SNF32_06535;Dbxref=NCBI_GP:MDY4307147.1;Name=MDY4307147.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06535;product=hypothetical protein;protein_id=MDY4307147.1;transl_table=11 JAXGFV010000009.1 Genbank gene 72190 72567 . - . ID=gene-SNF32_06540;Name=SNF32_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06540 JAXGFV010000009.1 GeneMarkS-2+ CDS 72190 72567 . - 0 ID=cds-MDY4307148.1;Parent=gene-SNF32_06540;Dbxref=NCBI_GP:MDY4307148.1;Name=MDY4307148.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06540;product=hypothetical protein;protein_id=MDY4307148.1;transl_table=11 JAXGFV010000009.1 Genbank gene 72519 73025 . - . ID=gene-SNF32_06545;Name=SNF32_06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06545 JAXGFV010000009.1 GeneMarkS-2+ CDS 72519 73025 . - 0 ID=cds-MDY4307149.1;Parent=gene-SNF32_06545;Dbxref=NCBI_GP:MDY4307149.1;Name=MDY4307149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06545;product=hypothetical protein;protein_id=MDY4307149.1;transl_table=11 JAXGFV010000009.1 Genbank gene 73340 73606 . - . ID=gene-SNF32_06550;Name=SNF32_06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06550 JAXGFV010000009.1 GeneMarkS-2+ CDS 73340 73606 . - 0 ID=cds-MDY4307150.1;Parent=gene-SNF32_06550;Dbxref=NCBI_GP:MDY4307150.1;Name=MDY4307150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06550;product=hypothetical protein;protein_id=MDY4307150.1;transl_table=11 JAXGFV010000009.1 Genbank gene 73594 74049 . - . ID=gene-SNF32_06555;Name=SNF32_06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06555 JAXGFV010000009.1 GeneMarkS-2+ CDS 73594 74049 . - 0 ID=cds-MDY4307151.1;Parent=gene-SNF32_06555;Dbxref=NCBI_GP:MDY4307151.1;Name=MDY4307151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06555;product=hypothetical protein;protein_id=MDY4307151.1;transl_table=11 JAXGFV010000009.1 Genbank gene 74278 74562 . - . ID=gene-SNF32_06560;Name=SNF32_06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06560 JAXGFV010000009.1 GeneMarkS-2+ CDS 74278 74562 . - 0 ID=cds-MDY4307152.1;Parent=gene-SNF32_06560;Dbxref=NCBI_GP:MDY4307152.1;Name=MDY4307152.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06560;product=helix-turn-helix domain-containing protein;protein_id=MDY4307152.1;transl_table=11 JAXGFV010000009.1 Genbank gene 74784 75017 . - . ID=gene-SNF32_06565;Name=SNF32_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_06565 JAXGFV010000009.1 GeneMarkS-2+ CDS 74784 75017 . - 0 ID=cds-MDY4307153.1;Parent=gene-SNF32_06565;Dbxref=NCBI_GP:MDY4307153.1;Name=MDY4307153.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_06565;product=hypothetical protein;protein_id=MDY4307153.1;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 75220 76154 . - . ID=gene-SNF32_06570;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=pseudogene;locus_tag=SNF32_06570;pseudo=true JAXGFV010000009.1 Protein Homology CDS 75220 76154 . - 0 ID=cds-SNF32_06570;Parent=gene-SNF32_06570;Note=frameshifted;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005235679.1;locus_tag=SNF32_06570;product=DNA-binding protein WhiA;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 76191 77185 . - . ID=gene-SNF32_06575;Name=SNF32_06575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_06575;pseudo=true JAXGFV010000009.1 Protein Homology CDS 76191 77185 . - 0 ID=cds-SNF32_06575;Parent=gene-SNF32_06575;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735233.1;locus_tag=SNF32_06575;product=YvcK family protein;pseudo=true;transl_table=11 JAXGFV010000009.1 Genbank pseudogene 77182 78065 . - . ID=gene-SNF32_06580;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=pseudogene;locus_tag=SNF32_06580;pseudo=true JAXGFV010000009.1 Protein Homology CDS 77182 78065 . - 0 ID=cds-SNF32_06580;Parent=gene-SNF32_06580;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002317628.1;locus_tag=SNF32_06580;product=RNase adapter RapZ;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000090.1 1 5089 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000090.1 Genbank region 1 5089 . + . ID=JAXGFV010000090.1:1..5089;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000090.1 Genbank pseudogene 333 771 . - . ID=gene-SNF32_16620;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=pseudogene;locus_tag=SNF32_16620;pseudo=true JAXGFV010000090.1 Protein Homology CDS 333 771 . - 0 ID=cds-SNF32_16620;Parent=gene-SNF32_16620;Note=frameshifted;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002337709.1;locus_tag=SNF32_16620;product=3-hydroxyacyl-ACP dehydratase FabZ;pseudo=true;transl_table=11 JAXGFV010000090.1 Genbank pseudogene 1010 1731 . + . ID=gene-SNF32_16625;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=pseudogene;locus_tag=SNF32_16625;pseudo=true JAXGFV010000090.1 Protein Homology CDS 1010 1731 . + 0 ID=cds-SNF32_16625;Parent=gene-SNF32_16625;Note=frameshifted;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005877106.1;locus_tag=SNF32_16625;product=enoyl-ACP reductase FabI;pseudo=true;transl_table=11 JAXGFV010000090.1 Genbank gene 1796 2809 . - . ID=gene-SNF32_16630;Name=SNF32_16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16630 JAXGFV010000090.1 Protein Homology CDS 1796 2809 . - 0 ID=cds-MDY4308155.1;Parent=gene-SNF32_16630;Dbxref=NCBI_GP:MDY4308155.1;Name=MDY4308155.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010735585.1;locus_tag=SNF32_16630;product=branched-chain amino acid aminotransferase;protein_id=MDY4308155.1;transl_table=11 JAXGFV010000090.1 Genbank pseudogene 2987 3901 . + . ID=gene-SNF32_16635;Name=SNF32_16635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16635;pseudo=true JAXGFV010000090.1 Protein Homology CDS 2987 3901 . + 0 ID=cds-SNF32_16635;Parent=gene-SNF32_16635;Note=frameshifted%3B internal stop;Ontology_term=GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002358009.1;locus_tag=SNF32_16635;product=mechanosensitive ion channel family protein;pseudo=true;transl_table=11 JAXGFV010000090.1 Genbank gene 4180 4686 . - . ID=gene-SNF32_16640;Name=cbpB;gbkey=Gene;gene=cbpB;gene_biotype=protein_coding;locus_tag=SNF32_16640 JAXGFV010000090.1 Protein Homology CDS 4180 4686 . - 0 ID=cds-MDY4308156.1;Parent=gene-SNF32_16640;Dbxref=NCBI_GP:MDY4308156.1;Name=MDY4308156.1;Ontology_term=GO:0180001;gbkey=CDS;gene=cbpB;go_function=cyclic-di-AMP binding|0180001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328417.1;locus_tag=SNF32_16640;product=cyclic-di-AMP-binding protein CbpB;protein_id=MDY4308156.1;transl_table=11 JAXGFV010000090.1 Genbank pseudogene 4792 5089 . - . ID=gene-SNF32_16645;Name=SNF32_16645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16645;pseudo=true JAXGFV010000090.1 Protein Homology CDS 4792 5089 . - 0 ID=cds-SNF32_16645;Parent=gene-SNF32_16645;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724525.1;locus_tag=SNF32_16645;product=metallophosphoesterase family protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000091.1 1 4728 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000091.1 Genbank region 1 4728 . + . ID=JAXGFV010000091.1:1..4728;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000091.1 Genbank pseudogene 401 1407 . - . ID=gene-SNF32_16650;Name=SNF32_16650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16650;pseudo=true JAXGFV010000091.1 Protein Homology CDS 401 1407 . - 0 ID=cds-SNF32_16650;Parent=gene-SNF32_16650;Note=frameshifted;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016180454.1;locus_tag=SNF32_16650;product=lactonase family protein;pseudo=true;transl_table=11 JAXGFV010000091.1 Genbank gene 1554 1916 . + . ID=gene-SNF32_16655;Name=SNF32_16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16655 JAXGFV010000091.1 Protein Homology CDS 1554 1916 . + 0 ID=cds-MDY4308157.1;Parent=gene-SNF32_16655;Dbxref=NCBI_GP:MDY4308157.1;Name=MDY4308157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724467.1;locus_tag=SNF32_16655;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=MDY4308157.1;transl_table=11 JAXGFV010000091.1 Genbank gene 1916 3073 . + . ID=gene-SNF32_16660;Name=SNF32_16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16660 JAXGFV010000091.1 Protein Homology CDS 1916 3073 . + 0 ID=cds-MDY4308158.1;Parent=gene-SNF32_16660;Dbxref=NCBI_GP:MDY4308158.1;Name=MDY4308158.1;Ontology_term=GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010736666.1;locus_tag=SNF32_16660;product=AI-2E family transporter;protein_id=MDY4308158.1;transl_table=11 JAXGFV010000091.1 Genbank pseudogene 3133 3562 . - . ID=gene-SNF32_16665;Name=SNF32_16665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16665;pseudo=true JAXGFV010000091.1 Protein Homology CDS 3133 3562 . - 0 ID=cds-SNF32_16665;Parent=gene-SNF32_16665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723602.1;locus_tag=SNF32_16665;product=hypothetical protein;pseudo=true;transl_table=11 JAXGFV010000091.1 Genbank pseudogene 3658 4728 . - . ID=gene-SNF32_16670;Name=SNF32_16670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16670;pseudo=true JAXGFV010000091.1 Protein Homology CDS 3658 4728 . - 1 ID=cds-SNF32_16670;Parent=gene-SNF32_16670;Note=frameshifted%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723601.1;locus_tag=SNF32_16670;product=LTA synthase family protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000092.1 1 4632 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000092.1 Genbank region 1 4632 . + . ID=JAXGFV010000092.1:1..4632;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000092.1 Genbank gene 230 754 . - . ID=gene-SNF32_16675;Name=SNF32_16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16675 JAXGFV010000092.1 Protein Homology CDS 230 754 . - 0 ID=cds-MDY4308159.1;Parent=gene-SNF32_16675;Dbxref=NCBI_GP:MDY4308159.1;Name=MDY4308159.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026049.3;locus_tag=SNF32_16675;product=hypothetical protein;protein_id=MDY4308159.1;transl_table=11 JAXGFV010000092.1 Genbank gene 711 1163 . - . ID=gene-SNF32_16680;Name=SNF32_16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16680 JAXGFV010000092.1 Protein Homology CDS 711 1163 . - 0 ID=cds-MDY4308160.1;Parent=gene-SNF32_16680;Dbxref=NCBI_GP:MDY4308160.1;Name=MDY4308160.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012432.3;locus_tag=SNF32_16680;product=lyase family protein;protein_id=MDY4308160.1;transl_table=11 JAXGFV010000092.1 Genbank gene 1103 1612 . - . ID=gene-SNF32_16685;Name=SNF32_16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16685 JAXGFV010000092.1 Protein Homology CDS 1103 1612 . - 0 ID=cds-MDY4308161.1;Parent=gene-SNF32_16685;Dbxref=NCBI_GP:MDY4308161.1;Name=MDY4308161.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012432.3;locus_tag=SNF32_16685;product=lyase family protein;protein_id=MDY4308161.1;transl_table=11 JAXGFV010000092.1 Genbank pseudogene 1714 2924 . - . ID=gene-SNF32_16690;Name=SNF32_16690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16690;pseudo=true JAXGFV010000092.1 Protein Homology CDS 1714 2924 . - 0 ID=cds-SNF32_16690;Parent=gene-SNF32_16690;Note=frameshifted;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010733938.1;locus_tag=SNF32_16690;product=argininosuccinate synthase;pseudo=true;transl_table=11 JAXGFV010000092.1 Genbank pseudogene 3301 3728 . + . ID=gene-SNF32_16695;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=pseudogene;locus_tag=SNF32_16695;pseudo=true JAXGFV010000092.1 Protein Homology CDS 3301 3728 . + 0 ID=cds-SNF32_16695;Parent=gene-SNF32_16695;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003083327.1;locus_tag=SNF32_16695;product=50S ribosomal protein L13;pseudo=true;transl_table=11 JAXGFV010000092.1 Genbank pseudogene 3744 4134 . + . ID=gene-SNF32_16700;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=pseudogene;locus_tag=SNF32_16700;pseudo=true JAXGFV010000092.1 Protein Homology CDS 3744 4134 . + 0 ID=cds-SNF32_16700;Parent=gene-SNF32_16700;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002942223.1;locus_tag=SNF32_16700;product=30S ribosomal protein S9;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000093.1 1 4571 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000093.1 Genbank region 1 4571 . + . ID=JAXGFV010000093.1:1..4571;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000093.1 Genbank pseudogene 1 1434 . - . ID=gene-SNF32_16705;Name=SNF32_16705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16705;pseudo=true JAXGFV010000093.1 Protein Homology CDS 1 1434 . - 0 ID=cds-SNF32_16705;Parent=gene-SNF32_16705;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002331954.1;locus_tag=SNF32_16705;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JAXGFV010000093.1 Genbank gene 1541 2149 . + . ID=gene-SNF32_16710;Name=SNF32_16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16710 JAXGFV010000093.1 Protein Homology CDS 1541 2149 . + 0 ID=cds-MDY4308162.1;Parent=gene-SNF32_16710;Dbxref=NCBI_GP:MDY4308162.1;Name=MDY4308162.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737012.1;locus_tag=SNF32_16710;product=NUDIX hydrolase;protein_id=MDY4308162.1;transl_table=11 JAXGFV010000093.1 Genbank pseudogene 2218 2669 . + . ID=gene-SNF32_16715;Name=SNF32_16715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16715;pseudo=true JAXGFV010000093.1 Protein Homology CDS 2218 2669 . + 0 ID=cds-SNF32_16715;Parent=gene-SNF32_16715;Note=frameshifted;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002300731.1;locus_tag=SNF32_16715;product=MarR family transcriptional regulator;pseudo=true;transl_table=11 JAXGFV010000093.1 Genbank pseudogene 2683 3214 . + . ID=gene-SNF32_16720;Name=SNF32_16720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16720;pseudo=true JAXGFV010000093.1 Protein Homology CDS 2683 3214 . + 0 ID=cds-SNF32_16720;Parent=gene-SNF32_16720;Note=frameshifted;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010737014.1;locus_tag=SNF32_16720;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 JAXGFV010000093.1 Genbank pseudogene 3246 3918 . + . ID=gene-SNF32_16725;Name=SNF32_16725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16725;pseudo=true JAXGFV010000093.1 Protein Homology CDS 3246 3918 . + 0 ID=cds-SNF32_16725;Parent=gene-SNF32_16725;Note=frameshifted;Ontology_term=GO:0003723,GO:0004826;gbkey=CDS;go_function=RNA binding|0003723||IEA,phenylalanine-tRNA ligase activity|0004826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000864841.1;locus_tag=SNF32_16725;product=phenylalanine--tRNA ligase beta subunit-related protein;pseudo=true;transl_table=11 JAXGFV010000093.1 Genbank gene 4138 4548 . + . ID=gene-SNF32_16730;Name=SNF32_16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16730 JAXGFV010000093.1 Protein Homology CDS 4138 4548 . + 0 ID=cds-MDY4308163.1;Parent=gene-SNF32_16730;Dbxref=NCBI_GP:MDY4308163.1;Name=MDY4308163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019724094.1;locus_tag=SNF32_16730;product=glyoxalase;protein_id=MDY4308163.1;transl_table=11 ##sequence-region JAXGFV010000094.1 1 4500 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000094.1 Genbank region 1 4500 . + . ID=JAXGFV010000094.1:1..4500;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000094.1 Genbank gene 1 1485 . - . ID=gene-SNF32_16735;Name=SNF32_16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16735;partial=true;start_range=.,1 JAXGFV010000094.1 Protein Homology CDS 1 1485 . - 0 ID=cds-MDY4308164.1;Parent=gene-SNF32_16735;Dbxref=NCBI_GP:MDY4308164.1;Name=MDY4308164.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016631904.1;locus_tag=SNF32_16735;partial=true;product=DNA topoisomerase (ATP-hydrolyzing);protein_id=MDY4308164.1;start_range=.,1;transl_table=11 JAXGFV010000094.1 Genbank pseudogene 1505 3450 . - . ID=gene-SNF32_16740;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=pseudogene;locus_tag=SNF32_16740;pseudo=true JAXGFV010000094.1 Protein Homology CDS 1505 3450 . - 0 ID=cds-SNF32_16740;Parent=gene-SNF32_16740;Note=frameshifted;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003129249.1;locus_tag=SNF32_16740;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;pseudo=true;transl_table=11 JAXGFV010000094.1 Genbank pseudogene 3457 4500 . - . ID=gene-SNF32_16745;Name=recF;gbkey=Gene;gene=recF;gene_biotype=pseudogene;locus_tag=SNF32_16745;pseudo=true JAXGFV010000094.1 Protein Homology CDS 3457 4500 . - 1 ID=cds-SNF32_16745;Parent=gene-SNF32_16745;Note=frameshifted%3B internal stop%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002309899.1;locus_tag=SNF32_16745;product=DNA replication/repair protein RecF;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000095.1 1 4253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000095.1 Genbank region 1 4253 . + . ID=JAXGFV010000095.1:1..4253;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000095.1 Genbank gene 1 1222 . + . ID=gene-SNF32_16750;Name=SNF32_16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16750;partial=true;start_range=.,1 JAXGFV010000095.1 Protein Homology CDS 1 1222 . + 1 ID=cds-MDY4308165.1;Parent=gene-SNF32_16750;Dbxref=NCBI_GP:MDY4308165.1;Name=MDY4308165.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025081.3;locus_tag=SNF32_16750;partial=true;product=lysozyme family protein;protein_id=MDY4308165.1;start_range=.,1;transl_table=11 JAXGFV010000095.1 Genbank gene 1264 1461 . + . ID=gene-SNF32_16755;Name=SNF32_16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16755 JAXGFV010000095.1 GeneMarkS-2+ CDS 1264 1461 . + 0 ID=cds-MDY4308166.1;Parent=gene-SNF32_16755;Dbxref=NCBI_GP:MDY4308166.1;Name=MDY4308166.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16755;product=hypothetical protein;protein_id=MDY4308166.1;transl_table=11 JAXGFV010000095.1 Genbank gene 1485 1730 . + . ID=gene-SNF32_16760;Name=SNF32_16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16760 JAXGFV010000095.1 Protein Homology CDS 1485 1730 . + 0 ID=cds-MDY4308167.1;Parent=gene-SNF32_16760;Dbxref=NCBI_GP:MDY4308167.1;Name=MDY4308167.1;Ontology_term=GO:0004040,GO:0042834;gbkey=CDS;go_function=amidase activity|0004040||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: protein motif:HMM:NF017102.3;locus_tag=SNF32_16760;product=CHAP domain-containing protein;protein_id=MDY4308167.1;transl_table=11 JAXGFV010000095.1 Genbank gene 2074 2673 . + . ID=gene-SNF32_16765;Name=SNF32_16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16765 JAXGFV010000095.1 GeneMarkS-2+ CDS 2074 2673 . + 0 ID=cds-MDY4308168.1;Parent=gene-SNF32_16765;Dbxref=NCBI_GP:MDY4308168.1;Name=MDY4308168.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16765;product=hypothetical protein;protein_id=MDY4308168.1;transl_table=11 JAXGFV010000095.1 Genbank gene 2944 4253 . + . ID=gene-SNF32_16770;Name=SNF32_16770;end_range=4253,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16770;partial=true JAXGFV010000095.1 GeneMarkS-2+ CDS 2944 4253 . + 0 ID=cds-MDY4308169.1;Parent=gene-SNF32_16770;Dbxref=NCBI_GP:MDY4308169.1;Name=MDY4308169.1;end_range=4253,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16770;partial=true;product=hypothetical protein;protein_id=MDY4308169.1;transl_table=11 ##sequence-region JAXGFV010000096.1 1 4238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000096.1 Genbank region 1 4238 . + . ID=JAXGFV010000096.1:1..4238;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000096.1 Genbank gene 3255 3689 . + . ID=gene-SNF32_16775;Name=SNF32_16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16775 JAXGFV010000096.1 GeneMarkS-2+ CDS 3255 3689 . + 0 ID=cds-MDY4308170.1;Parent=gene-SNF32_16775;Dbxref=NCBI_GP:MDY4308170.1;Name=MDY4308170.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16775;product=hypothetical protein;protein_id=MDY4308170.1;transl_table=11 JAXGFV010000096.1 Genbank gene 4058 4238 . + . ID=gene-SNF32_16780;Name=SNF32_16780;end_range=4238,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16780;partial=true JAXGFV010000096.1 Protein Homology CDS 4058 4238 . + 0 ID=cds-MDY4308171.1;Parent=gene-SNF32_16780;Dbxref=NCBI_GP:MDY4308171.1;Name=MDY4308171.1;end_range=4238,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006153390.1;locus_tag=SNF32_16780;partial=true;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=MDY4308171.1;transl_table=11 ##sequence-region JAXGFV010000097.1 1 4205 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000097.1 Genbank region 1 4205 . + . ID=JAXGFV010000097.1:1..4205;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000097.1 Genbank gene 90 317 . + . ID=gene-SNF32_16785;Name=SNF32_16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16785 JAXGFV010000097.1 Protein Homology CDS 90 317 . + 0 ID=cds-MDY4308172.1;Parent=gene-SNF32_16785;Dbxref=NCBI_GP:MDY4308172.1;Name=MDY4308172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010769173.1;locus_tag=SNF32_16785;product=DUF1146 family protein;protein_id=MDY4308172.1;transl_table=11 JAXGFV010000097.1 Genbank pseudogene 410 1675 . + . ID=gene-SNF32_16790;Name=murA;gbkey=Gene;gene=murA;gene_biotype=pseudogene;locus_tag=SNF32_16790;pseudo=true JAXGFV010000097.1 Protein Homology CDS 410 1675 . + 0 ID=cds-SNF32_16790;Parent=gene-SNF32_16790;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002416865.1;locus_tag=SNF32_16790;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;pseudo=true;transl_table=11 JAXGFV010000097.1 Genbank gene 1725 1901 . + . ID=gene-SNF32_16795;Name=SNF32_16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16795 JAXGFV010000097.1 Protein Homology CDS 1725 1901 . + 0 ID=cds-MDY4308173.1;Parent=gene-SNF32_16795;Dbxref=NCBI_GP:MDY4308173.1;Name=MDY4308173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734895.1;locus_tag=SNF32_16795;product=DNA-directed RNA polymerase subunit beta;protein_id=MDY4308173.1;transl_table=11 JAXGFV010000097.1 Genbank pseudogene 2113 2373 . + . ID=gene-SNF32_16800;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=pseudogene;locus_tag=SNF32_16800;pseudo=true JAXGFV010000097.1 Protein Homology CDS 2113 2373 . + 0 ID=cds-SNF32_16800;Parent=gene-SNF32_16800;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002338990.1;locus_tag=SNF32_16800;product=membrane protein insertion efficiency factor YidD;pseudo=true;transl_table=11 JAXGFV010000097.1 Genbank pseudogene 2419 2867 . + . ID=gene-SNF32_16805;Name=SNF32_16805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16805;pseudo=true JAXGFV010000097.1 Protein Homology CDS 2419 2867 . + 0 ID=cds-SNF32_16805;Parent=gene-SNF32_16805;Note=frameshifted;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010734897.1;locus_tag=SNF32_16805;product=N-acetyltransferase;pseudo=true;transl_table=11 JAXGFV010000097.1 Genbank pseudogene 2932 3815 . + . ID=gene-SNF32_16810;Name=SNF32_16810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16810;pseudo=true JAXGFV010000097.1 Protein Homology CDS 2932 3815 . + 0 ID=cds-SNF32_16810;Parent=gene-SNF32_16810;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019723789.1;locus_tag=SNF32_16810;product=ROK family protein;pseudo=true;transl_table=11 JAXGFV010000097.1 Genbank pseudogene 3880 4120 . + . ID=gene-SNF32_16815;Name=SNF32_16815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16815;pseudo=true JAXGFV010000097.1 Protein Homology CDS 3880 4120 . + 0 ID=cds-SNF32_16815;Parent=gene-SNF32_16815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002311271.1;locus_tag=SNF32_16815;product=DUF2969 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region JAXGFV010000098.1 1 4009 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000098.1 Genbank region 1 4009 . + . ID=JAXGFV010000098.1:1..4009;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000098.1 Genbank gene 1 186 . - . ID=gene-SNF32_16820;Name=SNF32_16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16820;partial=true;start_range=.,1 JAXGFV010000098.1 GeneMarkS-2+ CDS 1 186 . - 0 ID=cds-MDY4308174.1;Parent=gene-SNF32_16820;Dbxref=NCBI_GP:MDY4308174.1;Name=MDY4308174.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16820;partial=true;product=hypothetical protein;protein_id=MDY4308174.1;start_range=.,1;transl_table=11 JAXGFV010000098.1 Genbank gene 132 626 . - . ID=gene-SNF32_16825;Name=SNF32_16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16825 JAXGFV010000098.1 GeneMarkS-2+ CDS 132 626 . - 0 ID=cds-MDY4308175.1;Parent=gene-SNF32_16825;Dbxref=NCBI_GP:MDY4308175.1;Name=MDY4308175.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16825;product=hypothetical protein;protein_id=MDY4308175.1;transl_table=11 JAXGFV010000098.1 Genbank gene 626 937 . - . ID=gene-SNF32_16830;Name=SNF32_16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16830 JAXGFV010000098.1 GeneMarkS-2+ CDS 626 937 . - 0 ID=cds-MDY4308176.1;Parent=gene-SNF32_16830;Dbxref=NCBI_GP:MDY4308176.1;Name=MDY4308176.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16830;product=hypothetical protein;protein_id=MDY4308176.1;transl_table=11 JAXGFV010000098.1 Genbank gene 949 1962 . - . ID=gene-SNF32_16835;Name=SNF32_16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16835 JAXGFV010000098.1 GeneMarkS-2+ CDS 949 1962 . - 0 ID=cds-MDY4308177.1;Parent=gene-SNF32_16835;Dbxref=NCBI_GP:MDY4308177.1;Name=MDY4308177.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16835;product=hypothetical protein;protein_id=MDY4308177.1;transl_table=11 JAXGFV010000098.1 Genbank gene 2010 3089 . - . ID=gene-SNF32_16840;Name=SNF32_16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16840 JAXGFV010000098.1 GeneMarkS-2+ CDS 2010 3089 . - 0 ID=cds-MDY4308178.1;Parent=gene-SNF32_16840;Dbxref=NCBI_GP:MDY4308178.1;Name=MDY4308178.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16840;product=hypothetical protein;protein_id=MDY4308178.1;transl_table=11 JAXGFV010000098.1 Genbank gene 3248 4009 . - . ID=gene-SNF32_16845;Name=SNF32_16845;end_range=4009,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16845;partial=true JAXGFV010000098.1 GeneMarkS-2+ CDS 3248 4009 . - 0 ID=cds-MDY4308179.1;Parent=gene-SNF32_16845;Dbxref=NCBI_GP:MDY4308179.1;Name=MDY4308179.1;end_range=4009,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=SNF32_16845;partial=true;product=hypothetical protein;protein_id=MDY4308179.1;transl_table=11 ##sequence-region JAXGFV010000099.1 1 3779 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=53346 JAXGFV010000099.1 Genbank region 1 3779 . + . ID=JAXGFV010000099.1:1..3779;Dbxref=taxon:53346;collection-date=2020;country=Morocco: Tangier;gbkey=Src;isolation-source=feces;lat-lon=35.46 N 5.47 W;mol_type=genomic DNA;nat-host=camel;strain=203 JAXGFV010000099.1 Genbank gene 231 947 . - . ID=gene-SNF32_16850;Name=SNF32_16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16850 JAXGFV010000099.1 Protein Homology CDS 231 947 . - 0 ID=cds-MDY4308180.1;Parent=gene-SNF32_16850;Dbxref=NCBI_GP:MDY4308180.1;Name=MDY4308180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005232974.1;locus_tag=SNF32_16850;product=class A sortase;protein_id=MDY4308180.1;transl_table=11 JAXGFV010000099.1 Genbank pseudogene 972 1282 . - . ID=gene-SNF32_16855;Name=SNF32_16855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16855;pseudo=true JAXGFV010000099.1 Protein Homology CDS 972 1282 . - 0 ID=cds-SNF32_16855;Parent=gene-SNF32_16855;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010751665.1;locus_tag=SNF32_16855;product=nucleotide pyrophosphohydrolase;pseudo=true;transl_table=11 JAXGFV010000099.1 Genbank pseudogene 1601 2793 . - . ID=gene-SNF32_16860;Name=SNF32_16860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SNF32_16860;pseudo=true JAXGFV010000099.1 Protein Homology CDS 1601 2793 . - 0 ID=cds-SNF32_16860;Parent=gene-SNF32_16860;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005877172.1;locus_tag=SNF32_16860;product=MFS transporter;pseudo=true;transl_table=11 JAXGFV010000099.1 Genbank gene 3032 3721 . + . ID=gene-SNF32_16865;Name=SNF32_16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SNF32_16865 JAXGFV010000099.1 Protein Homology CDS 3032 3721 . + 0 ID=cds-MDY4308181.1;Parent=gene-SNF32_16865;Dbxref=NCBI_GP:MDY4308181.1;Name=MDY4308181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016177001.1;locus_tag=SNF32_16865;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=MDY4308181.1;transl_table=11 ###