##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM1768144v1 #!genome-build-accession NCBI_Assembly:GCF_017681445.1 #!annotation-date 04/29/2026 11:53:51 #!annotation-source NCBI RefSeq GCF_017681445.1-RS_2026_04_29 ##sequence-region NZ_JAFIRP010000001.1 1 153695 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000001.1 RefSeq region 1 153695 . + . ID=NZ_JAFIRP010000001.1:1..153695;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000001.1 RefSeq pseudogene 1 1078 . + . ID=gene-JYJ20_RS00005;Name=JYJ20_RS00005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS00005;partial=true;pseudo=true;start_range=.,1 NZ_JAFIRP010000001.1 Protein Homology CDS 1 1078 . + 2 ID=cds-JYJ20_RS00005;Parent=gene-JYJ20_RS00005;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0050318;gbkey=CDS;go_function=tannase activity|0050318||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652084.1;locus_tag=JYJ20_RS00005;partial=true;product=subtype B tannase;pseudo=true;start_range=.,1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 1133 2983 . + . ID=gene-JYJ20_RS00010;Name=JYJ20_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00010 NZ_JAFIRP010000001.1 Protein Homology CDS 1133 2983 . + 0 ID=cds-WP_006248378.1;Parent=gene-JYJ20_RS00010;Dbxref=GenBank:WP_006248378.1;Name=WP_006248378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248378.1;locus_tag=JYJ20_RS00010;product=ATP-binding protein;protein_id=WP_006248378.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 3079 3633 . - . ID=gene-JYJ20_RS00015;Name=JYJ20_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00015 NZ_JAFIRP010000001.1 Protein Homology CDS 3079 3633 . - 0 ID=cds-WP_006248379.1;Parent=gene-JYJ20_RS00015;Dbxref=GenBank:WP_006248379.1;Name=WP_006248379.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248379.1;locus_tag=JYJ20_RS00015;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_006248379.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 3700 5181 . - . ID=gene-JYJ20_RS00020;Name=JYJ20_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00020 NZ_JAFIRP010000001.1 Protein Homology CDS 3700 5181 . - 0 ID=cds-WP_080869750.1;Parent=gene-JYJ20_RS00020;Dbxref=GenBank:WP_080869750.1;Name=WP_080869750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248380.1;locus_tag=JYJ20_RS00020;product=outer membrane protein transport protein;protein_id=WP_080869750.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 5529 5981 . + . ID=gene-JYJ20_RS00025;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=JYJ20_RS00025 NZ_JAFIRP010000001.1 Protein Homology CDS 5529 5981 . + 0 ID=cds-WP_006248381.1;Parent=gene-JYJ20_RS00025;Dbxref=GenBank:WP_006248381.1;Name=WP_006248381.1;Ontology_term=GO:0006355,GO:0003690,GO:0003700;gbkey=CDS;gene=iscR;go_function=double-stranded DNA binding|0003690||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651778.1;locus_tag=JYJ20_RS00025;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_006248381.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 6036 7256 . + . ID=gene-JYJ20_RS00030;Name=JYJ20_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00030 NZ_JAFIRP010000001.1 Protein Homology CDS 6036 7256 . + 0 ID=cds-WP_006248382.1;Parent=gene-JYJ20_RS00030;Dbxref=GenBank:WP_006248382.1;Name=WP_006248382.1;Ontology_term=GO:0044571,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=[2Fe-2S] cluster assembly|0044571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018355286.1;locus_tag=JYJ20_RS00030;product=IscS subfamily cysteine desulfurase;protein_id=WP_006248382.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 7383 7766 . + . ID=gene-JYJ20_RS00035;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=JYJ20_RS00035 NZ_JAFIRP010000001.1 Protein Homology CDS 7383 7766 . + 0 ID=cds-WP_006248383.1;Parent=gene-JYJ20_RS00035;Dbxref=GenBank:WP_006248383.1;Name=WP_006248383.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248383.1;locus_tag=JYJ20_RS00035;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_006248383.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 7875 8198 . + . ID=gene-JYJ20_RS00040;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=JYJ20_RS00040 NZ_JAFIRP010000001.1 Protein Homology CDS 7875 8198 . + 0 ID=cds-WP_006248385.1;Parent=gene-JYJ20_RS00040;Dbxref=GenBank:WP_006248385.1;Name=WP_006248385.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340699.1;locus_tag=JYJ20_RS00040;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_006248385.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 8208 8729 . + . ID=gene-JYJ20_RS00045;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=JYJ20_RS00045 NZ_JAFIRP010000001.1 Protein Homology CDS 8208 8729 . + 0 ID=cds-WP_021280563.1;Parent=gene-JYJ20_RS00045;Dbxref=GenBank:WP_021280563.1;Name=WP_021280563.1;Ontology_term=GO:0044571,GO:0001671,GO:0051087;gbkey=CDS;gene=hscB;go_function=ATPase activator activity|0001671||IEA,protein-folding chaperone binding|0051087||IEA;go_process=[2Fe-2S] cluster assembly|0044571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248386.1;locus_tag=JYJ20_RS00045;product=Fe-S protein assembly co-chaperone HscB;protein_id=WP_021280563.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 8783 9415 . + . ID=gene-JYJ20_RS00050;Name=JYJ20_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00050 NZ_JAFIRP010000001.1 Protein Homology CDS 8783 9415 . + 0 ID=cds-WP_006248387.1;Parent=gene-JYJ20_RS00050;Dbxref=GenBank:WP_006248387.1;Name=WP_006248387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651773.1;locus_tag=JYJ20_RS00050;product=DUF2625 family protein;protein_id=WP_006248387.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 9563 9904 . + . ID=gene-JYJ20_RS00055;Name=JYJ20_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00055 NZ_JAFIRP010000001.1 Protein Homology CDS 9563 9904 . + 0 ID=cds-WP_006253362.1;Parent=gene-JYJ20_RS00055;Dbxref=GenBank:WP_006253362.1;Name=WP_006253362.1;Ontology_term=GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253362.1;locus_tag=JYJ20_RS00055;product=endonuclease domain-containing protein;protein_id=WP_006253362.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 10220 12073 . + . ID=gene-JYJ20_RS00060;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=JYJ20_RS00060 NZ_JAFIRP010000001.1 Protein Homology CDS 10220 12073 . + 0 ID=cds-WP_006248388.1;Parent=gene-JYJ20_RS00060;Dbxref=GenBank:WP_006248388.1;Name=WP_006248388.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251350.1;locus_tag=JYJ20_RS00060;product=Fe-S protein assembly chaperone HscA;protein_id=WP_006248388.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 12083 12448 . + . ID=gene-JYJ20_RS00065;Name=JYJ20_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00065 NZ_JAFIRP010000001.1 Protein Homology CDS 12083 12448 . + 0 ID=cds-WP_006248389.1;Parent=gene-JYJ20_RS00065;Dbxref=GenBank:WP_006248389.1;Name=WP_006248389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248389.1;locus_tag=JYJ20_RS00065;product=Imm51 family immunity protein;protein_id=WP_006248389.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 12467 12808 . + . ID=gene-JYJ20_RS00070;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=JYJ20_RS00070 NZ_JAFIRP010000001.1 Protein Homology CDS 12467 12808 . + 0 ID=cds-WP_006248390.1;Parent=gene-JYJ20_RS00070;Dbxref=GenBank:WP_006248390.1;Name=WP_006248390.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006717450.1;locus_tag=JYJ20_RS00070;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_006248390.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 12808 13002 . + . ID=gene-JYJ20_RS00075;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=JYJ20_RS00075 NZ_JAFIRP010000001.1 Protein Homology CDS 12808 13002 . + 0 ID=cds-WP_006248391.1;Parent=gene-JYJ20_RS00075;Dbxref=GenBank:WP_006248391.1;Name=WP_006248391.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005656371.1;locus_tag=JYJ20_RS00075;product=Fe-S cluster assembly protein IscX;protein_id=WP_006248391.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 13131 14066 . + . ID=gene-JYJ20_RS00080;Name=JYJ20_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00080 NZ_JAFIRP010000001.1 Protein Homology CDS 13131 14066 . + 0 ID=cds-WP_006248392.1;Parent=gene-JYJ20_RS00080;Dbxref=GenBank:WP_006248392.1;Name=WP_006248392.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248392.1;locus_tag=JYJ20_RS00080;product=TDT family transporter;protein_id=WP_006248392.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 14167 15417 . - . ID=gene-JYJ20_RS00085;Name=JYJ20_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00085 NZ_JAFIRP010000001.1 Protein Homology CDS 14167 15417 . - 0 ID=cds-WP_006248393.1;Parent=gene-JYJ20_RS00085;Dbxref=GenBank:WP_006248393.1;Name=WP_006248393.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251347.1;locus_tag=JYJ20_RS00085;product=multifunctional CCA addition/repair protein;protein_id=WP_006248393.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 15614 16246 . - . ID=gene-JYJ20_RS00090;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=JYJ20_RS00090 NZ_JAFIRP010000001.1 Protein Homology CDS 15614 16246 . - 0 ID=cds-WP_006248394.1;Parent=gene-JYJ20_RS00090;Dbxref=GenBank:WP_006248394.1;Name=WP_006248394.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005721589.1;locus_tag=JYJ20_RS00090;product=endonuclease III;protein_id=WP_006248394.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 16249 17013 . - . ID=gene-JYJ20_RS00095;Name=JYJ20_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00095 NZ_JAFIRP010000001.1 Protein Homology CDS 16249 17013 . - 0 ID=cds-WP_006248395.1;Parent=gene-JYJ20_RS00095;Dbxref=GenBank:WP_006248395.1;Name=WP_006248395.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248395.1;locus_tag=JYJ20_RS00095;product=TSUP family transporter;protein_id=WP_006248395.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq pseudogene 17013 18097 . - . ID=gene-JYJ20_RS00100;Name=proB;gbkey=Gene;gene=proB;gene_biotype=pseudogene;locus_tag=JYJ20_RS00100;pseudo=true NZ_JAFIRP010000001.1 Protein Homology CDS 17013 18097 . - 0 ID=cds-JYJ20_RS00100;Parent=gene-JYJ20_RS00100;Note=frameshifted;Ontology_term=GO:0055129,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601213.1;locus_tag=JYJ20_RS00100;product=glutamate 5-kinase;pseudo=true;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 18209 18703 . + . ID=gene-JYJ20_RS00110;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=JYJ20_RS00110 NZ_JAFIRP010000001.1 Protein Homology CDS 18209 18703 . + 0 ID=cds-WP_006248397.1;Parent=gene-JYJ20_RS00110;Dbxref=GenBank:WP_006248397.1;Name=WP_006248397.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248397.1;locus_tag=JYJ20_RS00110;product=type 3 dihydrofolate reductase;protein_id=WP_006248397.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 18823 19053 . + . ID=gene-JYJ20_RS00115;Name=JYJ20_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00115 NZ_JAFIRP010000001.1 Protein Homology CDS 18823 19053 . + 0 ID=cds-WP_006248398.1;Parent=gene-JYJ20_RS00115;Dbxref=GenBank:WP_006248398.1;Name=WP_006248398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248398.1;locus_tag=JYJ20_RS00115;product=YgjV family protein;protein_id=WP_006248398.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 19108 20487 . - . ID=gene-JYJ20_RS00120;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=JYJ20_RS00120 NZ_JAFIRP010000001.1 Protein Homology CDS 19108 20487 . - 0 ID=cds-WP_006248399.1;Parent=gene-JYJ20_RS00120;Dbxref=GenBank:WP_006248399.1;Name=WP_006248399.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991736.1;locus_tag=JYJ20_RS00120;product=DNA repair protein RadA;protein_id=WP_006248399.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 20668 21147 . + . ID=gene-JYJ20_RS00125;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=JYJ20_RS00125 NZ_JAFIRP010000001.1 Protein Homology CDS 20668 21147 . + 0 ID=cds-WP_006248401.1;Parent=gene-JYJ20_RS00125;Dbxref=GenBank:WP_006248401.1;Name=WP_006248401.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248401.1;locus_tag=JYJ20_RS00125;product=prepilin peptidase-dependent pilin;protein_id=WP_006248401.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq pseudogene 21168 21611 . + . ID=gene-JYJ20_RS00130;Name=JYJ20_RS00130;end_range=21611,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS00130;partial=true;pseudo=true NZ_JAFIRP010000001.1 Protein Homology CDS 21168 21611 . + 0 ID=cds-JYJ20_RS00130;Parent=gene-JYJ20_RS00130;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=21611,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251341.1;locus_tag=JYJ20_RS00130;partial=true;product=GspE/PulE/PilB domain-containing protein;pseudo=true;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 21617 22813 . + . ID=gene-JYJ20_RS00135;Name=JYJ20_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00135 NZ_JAFIRP010000001.1 Protein Homology CDS 21617 22813 . + 0 ID=cds-WP_006248403.1;Parent=gene-JYJ20_RS00135;Dbxref=GenBank:WP_006248403.1;Name=WP_006248403.1;Ontology_term=GO:0015628,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248403.1;locus_tag=JYJ20_RS00135;product=type II secretion system F family protein;protein_id=WP_006248403.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 22816 23472 . + . ID=gene-JYJ20_RS00140;Name=JYJ20_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00140 NZ_JAFIRP010000001.1 Protein Homology CDS 22816 23472 . + 0 ID=cds-WP_006248404.1;Parent=gene-JYJ20_RS00140;Dbxref=GenBank:WP_006248404.1;Name=WP_006248404.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248404.1;locus_tag=JYJ20_RS00140;product=prepilin peptidase;protein_id=WP_006248404.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 23508 24143 . + . ID=gene-JYJ20_RS00145;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=JYJ20_RS00145 NZ_JAFIRP010000001.1 Protein Homology CDS 23508 24143 . + 0 ID=cds-WP_006248405.1;Parent=gene-JYJ20_RS00145;Dbxref=GenBank:WP_006248405.1;Name=WP_006248405.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248405.1;locus_tag=JYJ20_RS00145;product=dephospho-CoA kinase;protein_id=WP_006248405.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 24125 24310 . + . ID=gene-JYJ20_RS00150;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=JYJ20_RS00150 NZ_JAFIRP010000001.1 Protein Homology CDS 24125 24310 . + 0 ID=cds-WP_006248406.1;Parent=gene-JYJ20_RS00150;Dbxref=GenBank:WP_006248406.1;Name=WP_006248406.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248406.1;locus_tag=JYJ20_RS00150;product=DNA gyrase inhibitor YacG;protein_id=WP_006248406.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 24311 25336 . - . ID=gene-JYJ20_RS00155;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=JYJ20_RS00155 NZ_JAFIRP010000001.1 Protein Homology CDS 24311 25336 . - 0 ID=cds-WP_006253426.1;Parent=gene-JYJ20_RS00155;Dbxref=GenBank:WP_006253426.1;Name=WP_006253426.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253426.1;locus_tag=JYJ20_RS00155;product=DNA polymerase III subunit delta;protein_id=WP_006253426.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 25379 25867 . - . ID=gene-JYJ20_RS00160;Name=JYJ20_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00160 NZ_JAFIRP010000001.1 Protein Homology CDS 25379 25867 . - 0 ID=cds-WP_209025910.1;Parent=gene-JYJ20_RS00160;Dbxref=GenBank:WP_209025910.1;Name=WP_209025910.1;Ontology_term=GO:0015920,GO:0043165,GO:0001530;gbkey=CDS;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251337.1;locus_tag=JYJ20_RS00160;product=LPS-assembly lipoprotein LptE;protein_id=WP_209025910.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 26067 28652 . - . ID=gene-JYJ20_RS00165;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=JYJ20_RS00165 NZ_JAFIRP010000001.1 Protein Homology CDS 26067 28652 . - 0 ID=cds-WP_006248409.1;Parent=gene-JYJ20_RS00165;Dbxref=GenBank:WP_006248409.1;Name=WP_006248409.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601197.1;locus_tag=JYJ20_RS00165;product=leucine--tRNA ligase;protein_id=WP_006248409.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 28915 29052 . + . ID=gene-JYJ20_RS12045;Name=JYJ20_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12045 NZ_JAFIRP010000001.1 GeneMarkS-2+ CDS 28915 29052 . + 0 ID=cds-WP_245155363.1;Parent=gene-JYJ20_RS12045;Dbxref=GenBank:WP_245155363.1;Name=WP_245155363.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS12045;product=hypothetical protein;protein_id=WP_245155363.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 29045 29371 . + . ID=gene-JYJ20_RS00175;Name=JYJ20_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00175 NZ_JAFIRP010000001.1 Protein Homology CDS 29045 29371 . + 0 ID=cds-WP_006251335.1;Parent=gene-JYJ20_RS00175;Dbxref=GenBank:WP_006251335.1;Name=WP_006251335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248412.1;locus_tag=JYJ20_RS00175;product=hypothetical protein;protein_id=WP_006251335.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 29430 30737 . - . ID=gene-JYJ20_RS00180;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=JYJ20_RS00180 NZ_JAFIRP010000001.1 Protein Homology CDS 29430 30737 . - 0 ID=cds-WP_006248413.1;Parent=gene-JYJ20_RS00180;Dbxref=GenBank:WP_006248413.1;Name=WP_006248413.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874613.1;locus_tag=JYJ20_RS00180;product=serine--tRNA ligase;protein_id=WP_006248413.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 30940 31419 . - . ID=gene-JYJ20_RS00185;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=JYJ20_RS00185 NZ_JAFIRP010000001.1 Protein Homology CDS 30940 31419 . - 0 ID=cds-WP_006248414.1;Parent=gene-JYJ20_RS00185;Dbxref=GenBank:WP_006248414.1;Name=WP_006248414.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248414.1;locus_tag=JYJ20_RS00185;product=SsrA-binding protein SmpB;protein_id=WP_006248414.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 31527 31850 . - . ID=gene-JYJ20_RS00190;Name=JYJ20_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00190 NZ_JAFIRP010000001.1 Protein Homology CDS 31527 31850 . - 0 ID=cds-WP_006248416.1;Parent=gene-JYJ20_RS00190;Dbxref=GenBank:WP_006248416.1;Name=WP_006248416.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248416.1;locus_tag=JYJ20_RS00190;product=helix-turn-helix domain-containing protein;protein_id=WP_006248416.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 31843 32193 . - . ID=gene-JYJ20_RS00195;Name=JYJ20_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00195 NZ_JAFIRP010000001.1 Protein Homology CDS 31843 32193 . - 0 ID=cds-WP_006248417.1;Parent=gene-JYJ20_RS00195;Dbxref=GenBank:WP_006248417.1;Name=WP_006248417.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248417.1;locus_tag=JYJ20_RS00195;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_006248417.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 32239 33648 . - . ID=gene-JYJ20_RS00200;Name=JYJ20_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00200 NZ_JAFIRP010000001.1 Protein Homology CDS 32239 33648 . - 0 ID=cds-WP_209025911.1;Parent=gene-JYJ20_RS00200;Dbxref=GenBank:WP_209025911.1;Name=WP_209025911.1;Ontology_term=GO:0003924,GO:0005525,GO:0019003;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,GDP binding|0019003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651853.1;locus_tag=JYJ20_RS00200;product=YcjX family GTP-binding protein;protein_id=WP_209025911.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 33709 34560 . + . ID=gene-JYJ20_RS00205;Name=JYJ20_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00205 NZ_JAFIRP010000001.1 Protein Homology CDS 33709 34560 . + 0 ID=cds-WP_006248419.1;Parent=gene-JYJ20_RS00205;Dbxref=GenBank:WP_006248419.1;Name=WP_006248419.1;Ontology_term=GO:0046872,GO:0050355;gbkey=CDS;go_function=metal ion binding|0046872||IEA,inorganic triphosphate phosphatase activity|0050355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248419.1;locus_tag=JYJ20_RS00205;product=CYTH domain-containing protein;protein_id=WP_006248419.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 34597 35073 . - . ID=gene-JYJ20_RS00210;Name=JYJ20_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00210 NZ_JAFIRP010000001.1 Protein Homology CDS 34597 35073 . - 0 ID=cds-WP_209025912.1;Parent=gene-JYJ20_RS00210;Dbxref=GenBank:WP_209025912.1;Name=WP_209025912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253054.1;locus_tag=JYJ20_RS00210;product=hypothetical protein;protein_id=WP_209025912.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 35066 35230 . - . ID=gene-JYJ20_RS00215;Name=JYJ20_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00215 NZ_JAFIRP010000001.1 Protein Homology CDS 35066 35230 . - 0 ID=cds-WP_006248421.1;Parent=gene-JYJ20_RS00215;Dbxref=GenBank:WP_006248421.1;Name=WP_006248421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248421.1;locus_tag=JYJ20_RS00215;product=YoaH family protein;protein_id=WP_006248421.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 35248 35976 . - . ID=gene-JYJ20_RS00220;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=JYJ20_RS00220 NZ_JAFIRP010000001.1 Protein Homology CDS 35248 35976 . - 0 ID=cds-WP_006248422.1;Parent=gene-JYJ20_RS00220;Dbxref=GenBank:WP_006248422.1;Name=WP_006248422.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253053.1;locus_tag=JYJ20_RS00220;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_006248422.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 36130 36441 . - . ID=gene-JYJ20_RS00225;Name=JYJ20_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00225 NZ_JAFIRP010000001.1 Protein Homology CDS 36130 36441 . - 0 ID=cds-WP_006248423.1;Parent=gene-JYJ20_RS00225;Dbxref=GenBank:WP_006248423.1;Name=WP_006248423.1;Ontology_term=GO:0044010;gbkey=CDS;go_process=single-species biofilm formation|0044010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005623108.1;locus_tag=JYJ20_RS00225;product=YqcC family protein;protein_id=WP_006248423.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 36529 37965 . + . ID=gene-JYJ20_RS00230;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=JYJ20_RS00230 NZ_JAFIRP010000001.1 Protein Homology CDS 36529 37965 . + 0 ID=cds-WP_006248424.1;Parent=gene-JYJ20_RS00230;Dbxref=GenBank:WP_006248424.1;Name=WP_006248424.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248424.1;locus_tag=JYJ20_RS00230;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_006248424.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 38190 40190 . + . ID=gene-JYJ20_RS00235;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=JYJ20_RS00235 NZ_JAFIRP010000001.1 Protein Homology CDS 38190 40190 . + 0 ID=cds-WP_006248426.1;Parent=gene-JYJ20_RS00235;Dbxref=GenBank:WP_006248426.1;Name=WP_006248426.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251332.1;locus_tag=JYJ20_RS00235;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmC2/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC1;protein_id=WP_006248426.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 40228 41022 . - . ID=gene-JYJ20_RS00240;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=JYJ20_RS00240 NZ_JAFIRP010000001.1 Protein Homology CDS 40228 41022 . - 0 ID=cds-WP_006248427.1;Parent=gene-JYJ20_RS00240;Dbxref=GenBank:WP_006248427.1;Name=WP_006248427.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651705.1;locus_tag=JYJ20_RS00240;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_006248427.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 41056 41514 . - . ID=gene-JYJ20_RS00245;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=JYJ20_RS00245 NZ_JAFIRP010000001.1 Protein Homology CDS 41056 41514 . - 0 ID=cds-WP_006248428.1;Parent=gene-JYJ20_RS00245;Dbxref=GenBank:WP_006248428.1;Name=WP_006248428.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248428.1;locus_tag=JYJ20_RS00245;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_006248428.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 41543 42568 . - . ID=gene-JYJ20_RS00250;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=JYJ20_RS00250 NZ_JAFIRP010000001.1 Protein Homology CDS 41543 42568 . - 0 ID=cds-WP_006248429.1;Parent=gene-JYJ20_RS00250;Dbxref=GenBank:WP_006248429.1;Name=WP_006248429.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248429.1;locus_tag=JYJ20_RS00250;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_006248429.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 42568 43359 . - . ID=gene-JYJ20_RS00255;Name=JYJ20_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00255 NZ_JAFIRP010000001.1 Protein Homology CDS 42568 43359 . - 0 ID=cds-WP_006248430.1;Parent=gene-JYJ20_RS00255;Dbxref=GenBank:WP_006248430.1;Name=WP_006248430.1;Ontology_term=GO:0006457,GO:0051082,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614636.1;locus_tag=JYJ20_RS00255;product=OmpH/Skp family outer membrane protein;protein_id=WP_006248430.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 43439 45820 . - . ID=gene-JYJ20_RS00260;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=JYJ20_RS00260 NZ_JAFIRP010000001.1 Protein Homology CDS 43439 45820 . - 0 ID=cds-WP_006253604.1;Parent=gene-JYJ20_RS00260;Dbxref=GenBank:WP_006253604.1;Name=WP_006253604.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600511.1;locus_tag=JYJ20_RS00260;product=outer membrane protein assembly factor BamA;protein_id=WP_006253604.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 45935 47245 . - . ID=gene-JYJ20_RS00265;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=JYJ20_RS00265 NZ_JAFIRP010000001.1 Protein Homology CDS 45935 47245 . - 0 ID=cds-WP_006248432.1;Parent=gene-JYJ20_RS00265;Dbxref=GenBank:WP_006248432.1;Name=WP_006248432.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603714.1;locus_tag=JYJ20_RS00265;product=RIP metalloprotease RseP;protein_id=WP_006248432.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 47249 48118 . - . ID=gene-JYJ20_RS00270;Name=JYJ20_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00270 NZ_JAFIRP010000001.1 Protein Homology CDS 47249 48118 . - 0 ID=cds-WP_006251328.1;Parent=gene-JYJ20_RS00270;Dbxref=GenBank:WP_006251328.1;Name=WP_006251328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622689.1;locus_tag=JYJ20_RS00270;product=phosphatidate cytidylyltransferase;protein_id=WP_006251328.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 48142 48855 . - . ID=gene-JYJ20_RS00275;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=JYJ20_RS00275 NZ_JAFIRP010000001.1 Protein Homology CDS 48142 48855 . - 0 ID=cds-WP_006251327.1;Parent=gene-JYJ20_RS00275;Dbxref=GenBank:WP_006251327.1;Name=WP_006251327.1;Ontology_term=GO:0009252,GO:0005737;gbkey=CDS;gene=uppS;go_component=cytoplasm|0005737||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619022.1;locus_tag=JYJ20_RS00275;product=polyprenyl diphosphate synthase;protein_id=WP_006251327.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 49014 49721 . - . ID=gene-JYJ20_RS00280;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=JYJ20_RS00280 NZ_JAFIRP010000001.1 Protein Homology CDS 49014 49721 . - 0 ID=cds-WP_209025913.1;Parent=gene-JYJ20_RS00280;Dbxref=GenBank:WP_209025913.1;Name=WP_209025913.1;Ontology_term=GO:0051596,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651697.1;locus_tag=JYJ20_RS00280;product=hydroxyacylglutathione hydrolase;protein_id=WP_209025913.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 49756 49853 . - . ID=gene-JYJ20_RS00285;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=JYJ20_RS00285 NZ_JAFIRP010000001.1 cmsearch SRP_RNA 49756 49853 . - . ID=rna-JYJ20_RS00285;Parent=gene-JYJ20_RS00285;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=JYJ20_RS00285;product=signal recognition particle sRNA small type NZ_JAFIRP010000001.1 cmsearch exon 49756 49853 . - . ID=exon-JYJ20_RS00285-1;Parent=rna-JYJ20_RS00285;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=JYJ20_RS00285;product=signal recognition particle sRNA small type NZ_JAFIRP010000001.1 RefSeq gene 50013 51014 . - . ID=gene-JYJ20_RS00290;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=JYJ20_RS00290 NZ_JAFIRP010000001.1 Protein Homology CDS 50013 51014 . - 0 ID=cds-WP_006251326.1;Parent=gene-JYJ20_RS00290;Dbxref=GenBank:WP_006251326.1;Name=WP_006251326.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248436.1;locus_tag=JYJ20_RS00290;product=biotin synthase BioB;protein_id=WP_006251326.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 51107 52714 . - . ID=gene-JYJ20_RS00295;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=JYJ20_RS00295 NZ_JAFIRP010000001.1 Protein Homology CDS 51107 52714 . - 0 ID=cds-WP_006248437.1;Parent=gene-JYJ20_RS00295;Dbxref=GenBank:WP_006248437.1;Name=WP_006248437.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991341.1;locus_tag=JYJ20_RS00295;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_006248437.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 52989 53267 . + . ID=gene-JYJ20_RS00300;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=JYJ20_RS00300 NZ_JAFIRP010000001.1 Protein Homology CDS 52989 53267 . + 0 ID=cds-WP_006248439.1;Parent=gene-JYJ20_RS00300;Dbxref=GenBank:WP_006248439.1;Name=WP_006248439.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597256.1;locus_tag=JYJ20_RS00300;product=cell division protein FtsB;protein_id=WP_006248439.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 53285 53968 . + . ID=gene-JYJ20_RS00305;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=JYJ20_RS00305 NZ_JAFIRP010000001.1 Protein Homology CDS 53285 53968 . + 0 ID=cds-WP_006248440.1;Parent=gene-JYJ20_RS00305;Dbxref=GenBank:WP_006248440.1;Name=WP_006248440.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248440.1;locus_tag=JYJ20_RS00305;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_006248440.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 53970 54449 . + . ID=gene-JYJ20_RS00310;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=JYJ20_RS00310 NZ_JAFIRP010000001.1 Protein Homology CDS 53970 54449 . + 0 ID=cds-WP_006248441.1;Parent=gene-JYJ20_RS00310;Dbxref=GenBank:WP_006248441.1;Name=WP_006248441.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248441.1;locus_tag=JYJ20_RS00310;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_006248441.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 54564 55421 . - . ID=gene-JYJ20_RS00315;Name=JYJ20_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00315 NZ_JAFIRP010000001.1 Protein Homology CDS 54564 55421 . - 0 ID=cds-WP_044427287.1;Parent=gene-JYJ20_RS00315;Dbxref=GenBank:WP_044427287.1;Name=WP_044427287.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253606.1;locus_tag=JYJ20_RS00315;product=TPM domain-containing protein;protein_id=WP_044427287.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 55418 55876 . - . ID=gene-JYJ20_RS00320;Name=JYJ20_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00320 NZ_JAFIRP010000001.1 Protein Homology CDS 55418 55876 . - 0 ID=cds-WP_006248442.1;Parent=gene-JYJ20_RS00320;Dbxref=GenBank:WP_006248442.1;Name=WP_006248442.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005623246.1;locus_tag=JYJ20_RS00320;product=TPM domain-containing protein;protein_id=WP_006248442.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 55958 56542 . - . ID=gene-JYJ20_RS00325;Name=JYJ20_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00325 NZ_JAFIRP010000001.1 Protein Homology CDS 55958 56542 . - 0 ID=cds-WP_006253607.1;Parent=gene-JYJ20_RS00325;Dbxref=GenBank:WP_006253607.1;Name=WP_006253607.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253607.1;locus_tag=JYJ20_RS00325;product=LemA family protein;protein_id=WP_006253607.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 56720 57583 . + . ID=gene-JYJ20_RS00330;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=JYJ20_RS00330 NZ_JAFIRP010000001.1 Protein Homology CDS 56720 57583 . + 0 ID=cds-WP_006248827.1;Parent=gene-JYJ20_RS00330;Dbxref=GenBank:WP_006248827.1;Name=WP_006248827.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248827.1;locus_tag=JYJ20_RS00330;product=EamA family transporter RarD;protein_id=WP_006248827.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 57736 58230 . - . ID=gene-JYJ20_RS00335;Name=JYJ20_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00335 NZ_JAFIRP010000001.1 Protein Homology CDS 57736 58230 . - 0 ID=cds-WP_006248829.1;Parent=gene-JYJ20_RS00335;Dbxref=GenBank:WP_006248829.1;Name=WP_006248829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248829.1;locus_tag=JYJ20_RS00335;product=hypothetical protein;protein_id=WP_006248829.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 58421 60085 . - . ID=gene-JYJ20_RS00340;Name=JYJ20_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00340 NZ_JAFIRP010000001.1 Protein Homology CDS 58421 60085 . - 0 ID=cds-WP_006248830.1;Parent=gene-JYJ20_RS00340;Dbxref=GenBank:WP_006248830.1;Name=WP_006248830.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251319.1;locus_tag=JYJ20_RS00340;product=fructose-specific PTS transporter subunit EIIC;protein_id=WP_006248830.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 60111 61055 . - . ID=gene-JYJ20_RS00345;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=JYJ20_RS00345 NZ_JAFIRP010000001.1 Protein Homology CDS 60111 61055 . - 0 ID=cds-WP_006248831.1;Parent=gene-JYJ20_RS00345;Dbxref=GenBank:WP_006248831.1;Name=WP_006248831.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251318.1;locus_tag=JYJ20_RS00345;product=1-phosphofructokinase;protein_id=WP_006248831.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 61069 62547 . - . ID=gene-JYJ20_RS00350;Name=fruB;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=JYJ20_RS00350 NZ_JAFIRP010000001.1 Protein Homology CDS 61069 62547 . - 0 ID=cds-WP_006253608.1;Parent=gene-JYJ20_RS00350;Dbxref=GenBank:WP_006253608.1;Name=WP_006253608.1;gbkey=CDS;gene=fruB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251317.1;locus_tag=JYJ20_RS00350;product=fused PTS fructose transporter subunit IIA/HPr protein;protein_id=WP_006253608.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 62836 65058 . + . ID=gene-JYJ20_RS00355;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=JYJ20_RS00355 NZ_JAFIRP010000001.1 Protein Homology CDS 62836 65058 . + 0 ID=cds-WP_044427283.1;Parent=gene-JYJ20_RS00355;Dbxref=GenBank:WP_044427283.1;Name=WP_044427283.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253609.1;locus_tag=JYJ20_RS00355;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=WP_044427283.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 65077 67089 . + . ID=gene-JYJ20_RS00360;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=JYJ20_RS00360 NZ_JAFIRP010000001.1 Protein Homology CDS 65077 67089 . + 0 ID=cds-WP_006248928.1;Parent=gene-JYJ20_RS00360;Dbxref=GenBank:WP_006248928.1;Name=WP_006248928.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248928.1;locus_tag=JYJ20_RS00360;product=glycogen debranching protein GlgX;protein_id=WP_006248928.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 67082 68395 . + . ID=gene-JYJ20_RS00365;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=JYJ20_RS00365 NZ_JAFIRP010000001.1 Protein Homology CDS 67082 68395 . + 0 ID=cds-WP_006248929.1;Parent=gene-JYJ20_RS00365;Dbxref=GenBank:WP_006248929.1;Name=WP_006248929.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596318.1;locus_tag=JYJ20_RS00365;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_006248929.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 68518 69954 . + . ID=gene-JYJ20_RS00370;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=JYJ20_RS00370 NZ_JAFIRP010000001.1 Protein Homology CDS 68518 69954 . + 0 ID=cds-WP_006248930.1;Parent=gene-JYJ20_RS00370;Dbxref=GenBank:WP_006248930.1;Name=WP_006248930.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017357702.1;locus_tag=JYJ20_RS00370;product=glycogen synthase GlgA;protein_id=WP_006248930.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq pseudogene 70049 72549 . + . ID=gene-JYJ20_RS00375;Name=JYJ20_RS00375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS00375;pseudo=true NZ_JAFIRP010000001.1 Protein Homology CDS 70049 72549 . + 0 ID=cds-JYJ20_RS00375;Parent=gene-JYJ20_RS00375;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651737.1;locus_tag=JYJ20_RS00375;product=glycogen/starch/alpha-glucan phosphorylase;pseudo=true;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 72636 73352 . - . ID=gene-JYJ20_RS00380;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=JYJ20_RS00380 NZ_JAFIRP010000001.1 Protein Homology CDS 72636 73352 . - 0 ID=cds-WP_006248931.1;Parent=gene-JYJ20_RS00380;Dbxref=GenBank:WP_006248931.1;Name=WP_006248931.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251311.1;locus_tag=JYJ20_RS00380;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_006248931.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 73532 75070 . + . ID=gene-JYJ20_RS00385;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=JYJ20_RS00385 NZ_JAFIRP010000001.1 Protein Homology CDS 73532 75070 . + 0 ID=cds-WP_006248932.1;Parent=gene-JYJ20_RS00385;Dbxref=GenBank:WP_006248932.1;Name=WP_006248932.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007525314.1;locus_tag=JYJ20_RS00385;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_006248932.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 75085 76530 . + . ID=gene-JYJ20_RS00390;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=JYJ20_RS00390 NZ_JAFIRP010000001.1 Protein Homology CDS 75085 76530 . + 0 ID=cds-WP_015484594.1;Parent=gene-JYJ20_RS00390;Dbxref=GenBank:WP_015484594.1;Name=WP_015484594.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484594.1;locus_tag=JYJ20_RS00390;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_015484594.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 76597 77523 . - . ID=gene-JYJ20_RS00395;Name=JYJ20_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00395 NZ_JAFIRP010000001.1 Protein Homology CDS 76597 77523 . - 0 ID=cds-WP_006248934.1;Parent=gene-JYJ20_RS00395;Dbxref=GenBank:WP_006248934.1;Name=WP_006248934.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248934.1;locus_tag=JYJ20_RS00395;product=LysR family transcriptional regulator;protein_id=WP_006248934.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 77633 78748 . - . ID=gene-JYJ20_RS00400;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=JYJ20_RS00400 NZ_JAFIRP010000001.1 Protein Homology CDS 77633 78748 . - 0 ID=cds-WP_006248935.1;Parent=gene-JYJ20_RS00400;Dbxref=GenBank:WP_006248935.1;Name=WP_006248935.1;Ontology_term=GO:0009085,GO:0009088,GO:0071265,GO:1901705,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=L-lysine biosynthetic process|0009085||IEA,L-threonine biosynthetic process|0009088||IEA,L-methionine biosynthetic process|0071265||IEA,L-isoleucine biosynthetic process|1901705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017357680.1;locus_tag=JYJ20_RS00400;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_006248935.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 79123 79428 . + . ID=gene-JYJ20_RS00405;Name=JYJ20_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00405 NZ_JAFIRP010000001.1 Protein Homology CDS 79123 79428 . + 0 ID=cds-WP_006248936.1;Parent=gene-JYJ20_RS00405;Dbxref=GenBank:WP_006248936.1;Name=WP_006248936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248936.1;locus_tag=JYJ20_RS00405;product=hypothetical protein;protein_id=WP_006248936.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 80160 80555 . + . ID=gene-JYJ20_RS00410;Name=gpU;gbkey=Gene;gene=gpU;gene_biotype=protein_coding;locus_tag=JYJ20_RS00410 NZ_JAFIRP010000001.1 Protein Homology CDS 80160 80555 . + 0 ID=cds-WP_006248937.1;Parent=gene-JYJ20_RS00410;Dbxref=GenBank:WP_006248937.1;Name=WP_006248937.1;gbkey=CDS;gene=gpU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248937.1;locus_tag=JYJ20_RS00410;product=phage tail terminator protein;protein_id=WP_006248937.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 80566 82434 . + . ID=gene-JYJ20_RS00415;Name=JYJ20_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00415 NZ_JAFIRP010000001.1 Protein Homology CDS 80566 82434 . + 0 ID=cds-WP_006248938.1;Parent=gene-JYJ20_RS00415;Dbxref=GenBank:WP_006248938.1;Name=WP_006248938.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248938.1;locus_tag=JYJ20_RS00415;product=phage major capsid protein;protein_id=WP_006248938.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 82593 83834 . - . ID=gene-JYJ20_RS00420;Name=JYJ20_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00420 NZ_JAFIRP010000001.1 Protein Homology CDS 82593 83834 . - 0 ID=cds-WP_006248939.1;Parent=gene-JYJ20_RS00420;Dbxref=GenBank:WP_006248939.1;Name=WP_006248939.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248939.1;locus_tag=JYJ20_RS00420;product=tyrosine-type recombinase/integrase;protein_id=WP_006248939.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 84037 84122 . - . ID=gene-JYJ20_RS00425;Name=JYJ20_RS00425;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS00425 NZ_JAFIRP010000001.1 tRNAscan-SE tRNA 84037 84122 . - . ID=rna-JYJ20_RS00425;Parent=gene-JYJ20_RS00425;anticodon=(pos:complement(84086..84088));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS00425;product=tRNA-Leu NZ_JAFIRP010000001.1 tRNAscan-SE exon 84037 84122 . - . ID=exon-JYJ20_RS00425-1;Parent=rna-JYJ20_RS00425;anticodon=(pos:complement(84086..84088));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS00425;product=tRNA-Leu NZ_JAFIRP010000001.1 RefSeq gene 84147 84473 . - . ID=gene-JYJ20_RS00430;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=JYJ20_RS00430 NZ_JAFIRP010000001.1 Protein Homology CDS 84147 84473 . - 0 ID=cds-WP_209025914.1;Parent=gene-JYJ20_RS00430;Dbxref=GenBank:WP_209025914.1;Name=WP_209025914.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248940.1;locus_tag=JYJ20_RS00430;product=preprotein translocase subunit SecG;protein_id=WP_209025914.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 84579 86498 . - . ID=gene-JYJ20_RS00435;Name=JYJ20_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00435 NZ_JAFIRP010000001.1 Protein Homology CDS 84579 86498 . - 0 ID=cds-WP_006248941.1;Parent=gene-JYJ20_RS00435;Dbxref=GenBank:WP_006248941.1;Name=WP_006248941.1;Ontology_term=GO:0006261,GO:0006265,GO:0006310,GO:0051304,GO:0003677,GO:0003916,GO:0003917,GO:0098847;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA,sequence-specific single stranded DNA binding|0098847||IEA;go_process=DNA-templated DNA replication|0006261||IEA,DNA topological change|0006265||IEA,DNA recombination|0006310||IEA,chromosome separation|0051304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252007.1;locus_tag=JYJ20_RS00435;product=DNA topoisomerase III;protein_id=WP_006248941.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 86571 87398 . - . ID=gene-JYJ20_RS00440;Name=mepA;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=JYJ20_RS00440 NZ_JAFIRP010000001.1 Protein Homology CDS 86571 87398 . - 0 ID=cds-WP_006248942.1;Parent=gene-JYJ20_RS00440;Dbxref=GenBank:WP_006248942.1;Name=WP_006248942.1;Ontology_term=GO:0006508,GO:0004252,GO:0030288;gbkey=CDS;gene=mepA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252006.1;locus_tag=JYJ20_RS00440;product=penicillin-insensitive murein endopeptidase;protein_id=WP_006248942.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 87417 88499 . - . ID=gene-JYJ20_RS00445;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=JYJ20_RS00445 NZ_JAFIRP010000001.1 Protein Homology CDS 87417 88499 . - 0 ID=cds-WP_006248943.1;Parent=gene-JYJ20_RS00445;Dbxref=GenBank:WP_006248943.1;Name=WP_006248943.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012072711.1;locus_tag=JYJ20_RS00445;product=chorismate synthase;protein_id=WP_006248943.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 88502 91879 . - . ID=gene-JYJ20_RS00450;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=JYJ20_RS00450 NZ_JAFIRP010000001.1 Protein Homology CDS 88502 91879 . - 0 ID=cds-WP_006248944.1;Parent=gene-JYJ20_RS00450;Dbxref=GenBank:WP_006248944.1;Name=WP_006248944.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252004.1;locus_tag=JYJ20_RS00450;product=mechanosensitive channel MscK;protein_id=WP_006248944.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 91872 93290 . - . ID=gene-JYJ20_RS00455;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=JYJ20_RS00455 NZ_JAFIRP010000001.1 Protein Homology CDS 91872 93290 . - 0 ID=cds-WP_006248945.1;Parent=gene-JYJ20_RS00455;Dbxref=GenBank:WP_006248945.1;Name=WP_006248945.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252003.1;locus_tag=JYJ20_RS00455;product=o-succinylbenzoate--CoA ligase;protein_id=WP_006248945.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 93300 93866 . - . ID=gene-JYJ20_RS00460;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=JYJ20_RS00460 NZ_JAFIRP010000001.1 Protein Homology CDS 93300 93866 . - 0 ID=cds-WP_006248946.1;Parent=gene-JYJ20_RS00460;Dbxref=GenBank:WP_006248946.1;Name=WP_006248946.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248946.1;locus_tag=JYJ20_RS00460;product=replication initiation negative regulator SeqA;protein_id=WP_006248946.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 93985 94767 . + . ID=gene-JYJ20_RS00465;Name=JYJ20_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00465 NZ_JAFIRP010000001.1 Protein Homology CDS 93985 94767 . + 0 ID=cds-WP_209025915.1;Parent=gene-JYJ20_RS00465;Dbxref=GenBank:WP_209025915.1;Name=WP_209025915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253612.1;locus_tag=JYJ20_RS00465;product=alpha/beta fold hydrolase;protein_id=WP_209025915.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 94777 95505 . + . ID=gene-JYJ20_RS00470;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=JYJ20_RS00470 NZ_JAFIRP010000001.1 Protein Homology CDS 94777 95505 . + 0 ID=cds-WP_021279342.1;Parent=gene-JYJ20_RS00470;Dbxref=GenBank:WP_021279342.1;Name=WP_021279342.1;Ontology_term=GO:0002098;gbkey=CDS;gene=cmoA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248948.1;locus_tag=JYJ20_RS00470;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_021279342.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 95641 96660 . + . ID=gene-JYJ20_RS00475;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=JYJ20_RS00475 NZ_JAFIRP010000001.1 Protein Homology CDS 95641 96660 . + 0 ID=cds-WP_209025916.1;Parent=gene-JYJ20_RS00475;Dbxref=GenBank:WP_209025916.1;Name=WP_209025916.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252000.1;locus_tag=JYJ20_RS00475;product=HTH-type transcriptional repressor PurR;protein_id=WP_209025916.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 96662 97264 . + . ID=gene-JYJ20_RS00480;Name=JYJ20_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00480 NZ_JAFIRP010000001.1 Protein Homology CDS 96662 97264 . + 0 ID=cds-WP_006248950.1;Parent=gene-JYJ20_RS00480;Dbxref=GenBank:WP_006248950.1;Name=WP_006248950.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248950.1;locus_tag=JYJ20_RS00480;product=DedA family protein;protein_id=WP_006248950.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 97393 97548 . - . ID=gene-JYJ20_RS00485;Name=JYJ20_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00485 NZ_JAFIRP010000001.1 Protein Homology CDS 97393 97548 . - 0 ID=cds-WP_006248951.1;Parent=gene-JYJ20_RS00485;Dbxref=GenBank:WP_006248951.1;Name=WP_006248951.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248951.1;locus_tag=JYJ20_RS00485;product=DUF1328 domain-containing protein;protein_id=WP_006248951.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 97626 98207 . - . ID=gene-JYJ20_RS00490;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=JYJ20_RS00490 NZ_JAFIRP010000001.1 Protein Homology CDS 97626 98207 . - 0 ID=cds-WP_006248952.1;Parent=gene-JYJ20_RS00490;Dbxref=GenBank:WP_006248952.1;Name=WP_006248952.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248952.1;locus_tag=JYJ20_RS00490;product=dCTP deaminase;protein_id=WP_006248952.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 98222 98869 . - . ID=gene-JYJ20_RS00495;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=JYJ20_RS00495 NZ_JAFIRP010000001.1 Protein Homology CDS 98222 98869 . - 0 ID=cds-WP_006248953.1;Parent=gene-JYJ20_RS00495;Dbxref=GenBank:WP_006248953.1;Name=WP_006248953.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248953.1;locus_tag=JYJ20_RS00495;product=uridine kinase;protein_id=WP_006248953.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 98973 99602 . + . ID=gene-JYJ20_RS00500;Name=JYJ20_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00500 NZ_JAFIRP010000001.1 Protein Homology CDS 98973 99602 . + 0 ID=cds-WP_006248954.1;Parent=gene-JYJ20_RS00500;Dbxref=GenBank:WP_006248954.1;Name=WP_006248954.1;Ontology_term=GO:0006865,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248954.1;locus_tag=JYJ20_RS00500;product=LysE/ArgO family amino acid transporter;protein_id=WP_006248954.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 99717 100769 . + . ID=gene-JYJ20_RS00505;Name=JYJ20_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00505 NZ_JAFIRP010000001.1 Protein Homology CDS 99717 100769 . + 0 ID=cds-WP_006248955.1;Parent=gene-JYJ20_RS00505;Dbxref=GenBank:WP_006248955.1;Name=WP_006248955.1;Ontology_term=GO:0000902,GO:0008360,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA;go_process=cell morphogenesis|0000902||IEA,regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607179.1;locus_tag=JYJ20_RS00505;product=rod shape-determining protein;protein_id=WP_006248955.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 100871 101926 . + . ID=gene-JYJ20_RS00510;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=JYJ20_RS00510 NZ_JAFIRP010000001.1 Protein Homology CDS 100871 101926 . + 0 ID=cds-WP_006248956.1;Parent=gene-JYJ20_RS00510;Dbxref=GenBank:WP_006248956.1;Name=WP_006248956.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596505.1;locus_tag=JYJ20_RS00510;product=rod shape-determining protein MreC;protein_id=WP_006248956.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 101926 102414 . + . ID=gene-JYJ20_RS00515;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=JYJ20_RS00515 NZ_JAFIRP010000001.1 Protein Homology CDS 101926 102414 . + 0 ID=cds-WP_006248957.1;Parent=gene-JYJ20_RS00515;Dbxref=GenBank:WP_006248957.1;Name=WP_006248957.1;Ontology_term=GO:0008360,GO:0016020;gbkey=CDS;gene=mreD;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596506.1;locus_tag=JYJ20_RS00515;product=rod shape-determining protein MreD;protein_id=WP_006248957.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 102424 103761 . + . ID=gene-JYJ20_RS00520;Name=JYJ20_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00520 NZ_JAFIRP010000001.1 Protein Homology CDS 102424 103761 . + 0 ID=cds-WP_006248958.1;Parent=gene-JYJ20_RS00520;Dbxref=GenBank:WP_006248958.1;Name=WP_006248958.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252760.1;locus_tag=JYJ20_RS00520;product=replication-associated recombination protein A;protein_id=WP_006248958.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 103848 104633 . + . ID=gene-JYJ20_RS00525;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=JYJ20_RS00525 NZ_JAFIRP010000001.1 Protein Homology CDS 103848 104633 . + 0 ID=cds-WP_006248959.1;Parent=gene-JYJ20_RS00525;Dbxref=GenBank:WP_006248959.1;Name=WP_006248959.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005724066.1;locus_tag=JYJ20_RS00525;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_006248959.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 104758 105558 . + . ID=gene-JYJ20_RS00530;Name=JYJ20_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00530 NZ_JAFIRP010000001.1 Protein Homology CDS 104758 105558 . + 0 ID=cds-WP_006248960.1;Parent=gene-JYJ20_RS00530;Dbxref=GenBank:WP_006248960.1;Name=WP_006248960.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=L-glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262817.1;locus_tag=JYJ20_RS00530;product=class II glutamine amidotransferase;protein_id=WP_006248960.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 105593 106486 . - . ID=gene-JYJ20_RS00535;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=JYJ20_RS00535 NZ_JAFIRP010000001.1 Protein Homology CDS 105593 106486 . - 0 ID=cds-WP_006248961.1;Parent=gene-JYJ20_RS00535;Dbxref=GenBank:WP_006248961.1;Name=WP_006248961.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617324.1;locus_tag=JYJ20_RS00535;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_006248961.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 106492 106722 . - . ID=gene-JYJ20_RS00540;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=JYJ20_RS00540 NZ_JAFIRP010000001.1 Protein Homology CDS 106492 106722 . - 0 ID=cds-WP_006248962.1;Parent=gene-JYJ20_RS00540;Dbxref=GenBank:WP_006248962.1;Name=WP_006248962.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251552.1;locus_tag=JYJ20_RS00540;product=exodeoxyribonuclease VII small subunit;protein_id=WP_006248962.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 106847 107635 . + . ID=gene-JYJ20_RS00545;Name=JYJ20_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00545 NZ_JAFIRP010000001.1 Protein Homology CDS 106847 107635 . + 0 ID=cds-WP_006251553.1;Parent=gene-JYJ20_RS00545;Dbxref=GenBank:WP_006251553.1;Name=WP_006251553.1;Ontology_term=GO:0016661,GO:0030151,GO:0030170,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251553.1;locus_tag=JYJ20_RS00545;product=MOSC domain-containing protein;protein_id=WP_006251553.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 107668 109617 . + . ID=gene-JYJ20_RS00550;Name=JYJ20_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00550 NZ_JAFIRP010000001.1 Protein Homology CDS 107668 109617 . + 0 ID=cds-WP_006253613.1;Parent=gene-JYJ20_RS00550;Dbxref=GenBank:WP_006253613.1;Name=WP_006253613.1;Ontology_term=GO:0070395;gbkey=CDS;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253613.1;locus_tag=JYJ20_RS00550;product=LTA synthase family protein;protein_id=WP_006253613.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 109762 110817 . - . ID=gene-JYJ20_RS00555;Name=JYJ20_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00555 NZ_JAFIRP010000001.1 Protein Homology CDS 109762 110817 . - 0 ID=cds-WP_006251368.1;Parent=gene-JYJ20_RS00555;Dbxref=GenBank:WP_006251368.1;Name=WP_006251368.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248811.1;locus_tag=JYJ20_RS00555;product=tyrosine-type recombinase/integrase;protein_id=WP_006251368.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 110777 111052 . - . ID=gene-JYJ20_RS00560;Name=JYJ20_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00560 NZ_JAFIRP010000001.1 Protein Homology CDS 110777 111052 . - 0 ID=cds-WP_006248810.1;Parent=gene-JYJ20_RS00560;Dbxref=GenBank:WP_006248810.1;Name=WP_006248810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248810.1;locus_tag=JYJ20_RS00560;product=DUF4224 domain-containing protein;protein_id=WP_006248810.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 111079 111570 . - . ID=gene-JYJ20_RS00565;Name=JYJ20_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00565 NZ_JAFIRP010000001.1 Protein Homology CDS 111079 111570 . - 0 ID=cds-WP_021279670.1;Parent=gene-JYJ20_RS00565;Dbxref=GenBank:WP_021279670.1;Name=WP_021279670.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248809.1;locus_tag=JYJ20_RS00565;product=class I SAM-dependent methyltransferase;protein_id=WP_021279670.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 111649 111825 . - . ID=gene-JYJ20_RS00570;Name=JYJ20_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00570 NZ_JAFIRP010000001.1 Protein Homology CDS 111649 111825 . - 0 ID=cds-WP_006247825.1;Parent=gene-JYJ20_RS00570;Dbxref=GenBank:WP_006247825.1;Name=WP_006247825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247825.1;locus_tag=JYJ20_RS00570;product=hypothetical protein;protein_id=WP_006247825.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 112077 112736 . - . ID=gene-JYJ20_RS00575;Name=JYJ20_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00575 NZ_JAFIRP010000001.1 Protein Homology CDS 112077 112736 . - 0 ID=cds-WP_209025917.1;Parent=gene-JYJ20_RS00575;Dbxref=GenBank:WP_209025917.1;Name=WP_209025917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005693944.1;locus_tag=JYJ20_RS00575;product=P22AR C-terminal domain-containing protein;protein_id=WP_209025917.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 113322 113528 . + . ID=gene-JYJ20_RS00580;Name=JYJ20_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00580 NZ_JAFIRP010000001.1 GeneMarkS-2+ CDS 113322 113528 . + 0 ID=cds-WP_209025918.1;Parent=gene-JYJ20_RS00580;Dbxref=GenBank:WP_209025918.1;Name=WP_209025918.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS00580;product=hypothetical protein;protein_id=WP_209025918.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 113615 113690 . - . ID=gene-JYJ20_RS00585;Name=JYJ20_RS00585;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS00585 NZ_JAFIRP010000001.1 tRNAscan-SE tRNA 113615 113690 . - . ID=rna-JYJ20_RS00585;Parent=gene-JYJ20_RS00585;anticodon=(pos:complement(113655..113657));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS00585;product=tRNA-Arg NZ_JAFIRP010000001.1 tRNAscan-SE exon 113615 113690 . - . ID=exon-JYJ20_RS00585-1;Parent=rna-JYJ20_RS00585;anticodon=(pos:complement(113655..113657));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS00585;product=tRNA-Arg NZ_JAFIRP010000001.1 RefSeq gene 114001 114237 . - . ID=gene-JYJ20_RS00590;Name=JYJ20_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00590 NZ_JAFIRP010000001.1 Protein Homology CDS 114001 114237 . - 0 ID=cds-WP_006250251.1;Parent=gene-JYJ20_RS00590;Dbxref=GenBank:WP_006250251.1;Name=WP_006250251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250251.1;locus_tag=JYJ20_RS00590;product=hypothetical protein;protein_id=WP_006250251.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 114653 114883 . - . ID=gene-JYJ20_RS00595;Name=JYJ20_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00595 NZ_JAFIRP010000001.1 Protein Homology CDS 114653 114883 . - 0 ID=cds-WP_015484163.1;Parent=gene-JYJ20_RS00595;Dbxref=GenBank:WP_015484163.1;Name=WP_015484163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250987.1;locus_tag=JYJ20_RS00595;product=hypothetical protein;protein_id=WP_015484163.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 115149 115568 . - . ID=gene-JYJ20_RS00600;Name=JYJ20_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00600 NZ_JAFIRP010000001.1 Protein Homology CDS 115149 115568 . - 0 ID=cds-WP_006250074.1;Parent=gene-JYJ20_RS00600;Dbxref=GenBank:WP_006250074.1;Name=WP_006250074.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012621799.1;locus_tag=JYJ20_RS00600;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_006250074.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 115607 115831 . - . ID=gene-JYJ20_RS00605;Name=JYJ20_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00605 NZ_JAFIRP010000001.1 Protein Homology CDS 115607 115831 . - 0 ID=cds-WP_318004554.1;Parent=gene-JYJ20_RS00605;Dbxref=GenBank:WP_318004554.1;Name=WP_318004554.1;Ontology_term=GO:0003729;gbkey=CDS;go_function=mRNA binding|0003729||IEA;inference=COORDINATES: protein motif:HMM:NF019540.7;locus_tag=JYJ20_RS00605;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_318004554.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 115914 116465 . - . ID=gene-JYJ20_RS00610;Name=JYJ20_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00610 NZ_JAFIRP010000001.1 GeneMarkS-2+ CDS 115914 116465 . - 0 ID=cds-WP_142778241.1;Parent=gene-JYJ20_RS00610;Dbxref=GenBank:WP_142778241.1;Name=WP_142778241.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS00610;product=hypothetical protein;protein_id=WP_142778241.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 116474 117412 . - . ID=gene-JYJ20_RS00615;Name=JYJ20_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00615 NZ_JAFIRP010000001.1 GeneMarkS-2+ CDS 116474 117412 . - 0 ID=cds-WP_142778240.1;Parent=gene-JYJ20_RS00615;Dbxref=GenBank:WP_142778240.1;Name=WP_142778240.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS00615;product=hypothetical protein;protein_id=WP_142778240.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 117443 118174 . - . ID=gene-JYJ20_RS00620;Name=JYJ20_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00620 NZ_JAFIRP010000001.1 Protein Homology CDS 117443 118174 . - 0 ID=cds-WP_061887049.1;Parent=gene-JYJ20_RS00620;Dbxref=GenBank:WP_061887049.1;Name=WP_061887049.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249426.1;locus_tag=JYJ20_RS00620;product=S24 family peptidase;protein_id=WP_061887049.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 118301 118525 . + . ID=gene-JYJ20_RS00625;Name=JYJ20_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00625 NZ_JAFIRP010000001.1 Protein Homology CDS 118301 118525 . + 0 ID=cds-WP_061887050.1;Parent=gene-JYJ20_RS00625;Dbxref=GenBank:WP_061887050.1;Name=WP_061887050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249425.1;locus_tag=JYJ20_RS00625;product=transcriptional regulator;protein_id=WP_061887050.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 118574 119335 . + . ID=gene-JYJ20_RS00630;Name=JYJ20_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00630 NZ_JAFIRP010000001.1 Protein Homology CDS 118574 119335 . + 0 ID=cds-WP_006249424.1;Parent=gene-JYJ20_RS00630;Dbxref=GenBank:WP_006249424.1;Name=WP_006249424.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249424.1;locus_tag=JYJ20_RS00630;product=Rha family transcriptional regulator;protein_id=WP_006249424.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 119332 120144 . + . ID=gene-JYJ20_RS00635;Name=JYJ20_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00635 NZ_JAFIRP010000001.1 Protein Homology CDS 119332 120144 . + 0 ID=cds-WP_209025919.1;Parent=gene-JYJ20_RS00635;Dbxref=GenBank:WP_209025919.1;Name=WP_209025919.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249423.1;locus_tag=JYJ20_RS00635;product=helix-turn-helix domain-containing protein;protein_id=WP_209025919.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 120132 120767 . + . ID=gene-JYJ20_RS00640;Name=JYJ20_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00640 NZ_JAFIRP010000001.1 Protein Homology CDS 120132 120767 . + 0 ID=cds-WP_006249422.1;Parent=gene-JYJ20_RS00640;Dbxref=GenBank:WP_006249422.1;Name=WP_006249422.1;Ontology_term=GO:0006270;gbkey=CDS;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249422.1;locus_tag=JYJ20_RS00640;product=replication protein P;protein_id=WP_006249422.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 120764 121336 . + . ID=gene-JYJ20_RS00645;Name=JYJ20_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00645 NZ_JAFIRP010000001.1 Protein Homology CDS 120764 121336 . + 0 ID=cds-WP_015484167.1;Parent=gene-JYJ20_RS00645;Dbxref=GenBank:WP_015484167.1;Name=WP_015484167.1;Ontology_term=GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484167.1;locus_tag=JYJ20_RS00645;product=DNA N-6-adenine-methyltransferase;protein_id=WP_015484167.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 121406 122434 . + . ID=gene-JYJ20_RS00650;Name=JYJ20_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00650 NZ_JAFIRP010000001.1 Protein Homology CDS 121406 122434 . + 0 ID=cds-WP_209025920.1;Parent=gene-JYJ20_RS00650;Dbxref=GenBank:WP_209025920.1;Name=WP_209025920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249419.1;locus_tag=JYJ20_RS00650;product=DUF968 domain-containing protein;protein_id=WP_209025920.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 122427 122786 . + . ID=gene-JYJ20_RS00655;Name=JYJ20_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00655 NZ_JAFIRP010000001.1 Protein Homology CDS 122427 122786 . + 0 ID=cds-WP_115262493.1;Parent=gene-JYJ20_RS00655;Dbxref=GenBank:WP_115262493.1;Name=WP_115262493.1;Ontology_term=GO:0006281,GO:0006310,GO:0000287,GO:0000400,GO:0008821;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,four-way junction DNA binding|0000400||IEA,crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249418.1;locus_tag=JYJ20_RS00655;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_115262493.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 122776 123135 . + . ID=gene-JYJ20_RS00660;Name=JYJ20_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00660 NZ_JAFIRP010000001.1 Protein Homology CDS 122776 123135 . + 0 ID=cds-WP_015484169.1;Parent=gene-JYJ20_RS00660;Dbxref=GenBank:WP_015484169.1;Name=WP_015484169.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484169.1;locus_tag=JYJ20_RS00660;product=antiterminator Q family protein;protein_id=WP_015484169.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 123215 124360 . + . ID=gene-JYJ20_RS00665;Name=JYJ20_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00665 NZ_JAFIRP010000001.1 Protein Homology CDS 123215 124360 . + 0 ID=cds-WP_115262492.1;Parent=gene-JYJ20_RS00665;Dbxref=GenBank:WP_115262492.1;Name=WP_115262492.1;Ontology_term=GO:0006304,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596662.1;locus_tag=JYJ20_RS00665;product=type I restriction endonuclease;protein_id=WP_115262492.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 124627 125313 . + . ID=gene-JYJ20_RS00670;Name=JYJ20_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00670 NZ_JAFIRP010000001.1 Protein Homology CDS 124627 125313 . + 0 ID=cds-WP_209025921.1;Parent=gene-JYJ20_RS00670;Dbxref=GenBank:WP_209025921.1;Name=WP_209025921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248801.1;locus_tag=JYJ20_RS00670;product=P22AR C-terminal domain-containing protein;protein_id=WP_209025921.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 125646 125999 . + . ID=gene-JYJ20_RS00675;Name=JYJ20_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00675 NZ_JAFIRP010000001.1 Protein Homology CDS 125646 125999 . + 0 ID=cds-WP_006252254.1;Parent=gene-JYJ20_RS00675;Dbxref=GenBank:WP_006252254.1;Name=WP_006252254.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252254.1;locus_tag=JYJ20_RS00675;product=phage holin%2C lambda family;protein_id=WP_006252254.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 125989 126582 . + . ID=gene-JYJ20_RS00680;Name=JYJ20_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00680 NZ_JAFIRP010000001.1 Protein Homology CDS 125989 126582 . + 0 ID=cds-WP_061888656.1;Parent=gene-JYJ20_RS00680;Dbxref=GenBank:WP_061888656.1;Name=WP_061888656.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252686.1;locus_tag=JYJ20_RS00680;product=glycoside hydrolase family 19 protein;protein_id=WP_061888656.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 126583 126912 . + . ID=gene-JYJ20_RS00685;Name=JYJ20_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00685 NZ_JAFIRP010000001.1 Protein Homology CDS 126583 126912 . + 0 ID=cds-WP_209025922.1;Parent=gene-JYJ20_RS00685;Dbxref=GenBank:WP_209025922.1;Name=WP_209025922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249197.1;locus_tag=JYJ20_RS00685;product=DUF2570 domain-containing protein;protein_id=WP_209025922.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 126878 127111 . + . ID=gene-JYJ20_RS00690;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=JYJ20_RS00690 NZ_JAFIRP010000001.1 Protein Homology CDS 126878 127111 . + 0 ID=cds-WP_061887059.1;Parent=gene-JYJ20_RS00690;Dbxref=GenBank:WP_061887059.1;Name=WP_061887059.1;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005715008.1;locus_tag=JYJ20_RS00690;product=Rz1-like lysis system protein LysC;protein_id=WP_061887059.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 127380 127856 . + . ID=gene-JYJ20_RS00695;Name=JYJ20_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00695 NZ_JAFIRP010000001.1 Protein Homology CDS 127380 127856 . + 0 ID=cds-WP_015484699.1;Parent=gene-JYJ20_RS00695;Dbxref=GenBank:WP_015484699.1;Name=WP_015484699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484699.1;locus_tag=JYJ20_RS00695;product=DUF1441 family protein;protein_id=WP_015484699.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 127856 129967 . + . ID=gene-JYJ20_RS00700;Name=JYJ20_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00700 NZ_JAFIRP010000001.1 Protein Homology CDS 127856 129967 . + 0 ID=cds-WP_041447905.1;Parent=gene-JYJ20_RS00700;Dbxref=GenBank:WP_041447905.1;Name=WP_041447905.1;Ontology_term=GO:0004519,GO:0005524,GO:0016887;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010786315.1;locus_tag=JYJ20_RS00700;product=phage terminase large subunit family protein;protein_id=WP_041447905.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 129964 130188 . + . ID=gene-JYJ20_RS00705;Name=JYJ20_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00705 NZ_JAFIRP010000001.1 Protein Homology CDS 129964 130188 . + 0 ID=cds-WP_015484701.1;Parent=gene-JYJ20_RS00705;Dbxref=GenBank:WP_015484701.1;Name=WP_015484701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249192.1;locus_tag=JYJ20_RS00705;product=Rho GTPase-activating protein;protein_id=WP_015484701.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq pseudogene 130188 131704 . + . ID=gene-JYJ20_RS00710;Name=JYJ20_RS00710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS00710;pseudo=true NZ_JAFIRP010000001.1 Protein Homology CDS 130188 131704 . + 0 ID=cds-JYJ20_RS00710;Parent=gene-JYJ20_RS00710;Note=frameshifted;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613589.1;locus_tag=JYJ20_RS00710;product=phage portal protein;pseudo=true;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 131708 132904 . + . ID=gene-JYJ20_RS00715;Name=JYJ20_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00715 NZ_JAFIRP010000001.1 GeneMarkS-2+ CDS 131708 132904 . + 0 ID=cds-WP_020824210.1;Parent=gene-JYJ20_RS00715;Dbxref=GenBank:WP_020824210.1;Name=WP_020824210.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS00715;product=hypothetical protein;protein_id=WP_020824210.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq pseudogene 133308 135270 . + . ID=gene-JYJ20_RS00720;Name=JYJ20_RS00720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS00720;pseudo=true NZ_JAFIRP010000001.1 Protein Homology CDS 133308 135270 . + 0 ID=cds-JYJ20_RS00720;Parent=gene-JYJ20_RS00720;Note=frameshifted;Ontology_term=GO:0019082,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013747158.1;locus_tag=JYJ20_RS00720;product=ClpP-like prohead protease/major capsid protein fusion protein;pseudo=true;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 135349 135510 . + . ID=gene-JYJ20_RS00725;Name=JYJ20_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00725 NZ_JAFIRP010000001.1 GeneMarkS-2+ CDS 135349 135510 . + 0 ID=cds-WP_158497199.1;Parent=gene-JYJ20_RS00725;Dbxref=GenBank:WP_158497199.1;Name=WP_158497199.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS00725;product=hypothetical protein;protein_id=WP_158497199.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 135523 135846 . + . ID=gene-JYJ20_RS00730;Name=JYJ20_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00730 NZ_JAFIRP010000001.1 Protein Homology CDS 135523 135846 . + 0 ID=cds-WP_020824208.1;Parent=gene-JYJ20_RS00730;Dbxref=GenBank:WP_020824208.1;Name=WP_020824208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596673.1;locus_tag=JYJ20_RS00730;product=DUF2190 family protein;protein_id=WP_020824208.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 135839 136141 . + . ID=gene-JYJ20_RS00735;Name=JYJ20_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00735 NZ_JAFIRP010000001.1 Protein Homology CDS 135839 136141 . + 0 ID=cds-WP_020824207.1;Parent=gene-JYJ20_RS00735;Dbxref=GenBank:WP_020824207.1;Name=WP_020824207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484709.1;locus_tag=JYJ20_RS00735;product=phage tail protein;protein_id=WP_020824207.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 136145 136669 . + . ID=gene-JYJ20_RS00740;Name=JYJ20_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00740 NZ_JAFIRP010000001.1 Protein Homology CDS 136145 136669 . + 0 ID=cds-WP_209025923.1;Parent=gene-JYJ20_RS00740;Dbxref=GenBank:WP_209025923.1;Name=WP_209025923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249187.1;locus_tag=JYJ20_RS00740;product=phage tail protein;protein_id=WP_209025923.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 136666 137061 . + . ID=gene-JYJ20_RS00745;Name=gpU;gbkey=Gene;gene=gpU;gene_biotype=protein_coding;locus_tag=JYJ20_RS00745 NZ_JAFIRP010000001.1 Protein Homology CDS 136666 137061 . + 0 ID=cds-WP_209025924.1;Parent=gene-JYJ20_RS00745;Dbxref=GenBank:WP_209025924.1;Name=WP_209025924.1;gbkey=CDS;gene=gpU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249186.1;locus_tag=JYJ20_RS00745;product=phage tail terminator protein;protein_id=WP_209025924.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 137089 137730 . + . ID=gene-JYJ20_RS00750;Name=JYJ20_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00750 NZ_JAFIRP010000001.1 Protein Homology CDS 137089 137730 . + 0 ID=cds-WP_021280065.1;Parent=gene-JYJ20_RS00750;Dbxref=GenBank:WP_021280065.1;Name=WP_021280065.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423,GO:0098026;gbkey=CDS;go_component=virion component|0044423||IEA,virus tail%2C tube|0098026||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247800.1;locus_tag=JYJ20_RS00750;product=phage tail protein;protein_id=WP_021280065.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 137813 138214 . + . ID=gene-JYJ20_RS00755;Name=JYJ20_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00755 NZ_JAFIRP010000001.1 Protein Homology CDS 137813 138214 . + 0 ID=cds-WP_021280066.1;Parent=gene-JYJ20_RS00755;Dbxref=GenBank:WP_021280066.1;Name=WP_021280066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247801.1;locus_tag=JYJ20_RS00755;product=hypothetical protein;protein_id=WP_021280066.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 138259 138489 . + . ID=gene-JYJ20_RS00760;Name=JYJ20_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00760 NZ_JAFIRP010000001.1 Protein Homology CDS 138259 138489 . + 0 ID=cds-WP_020824202.1;Parent=gene-JYJ20_RS00760;Dbxref=GenBank:WP_020824202.1;Name=WP_020824202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012072984.1;locus_tag=JYJ20_RS00760;product=phage tail assembly protein T;protein_id=WP_020824202.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 138552 138779 . + . ID=gene-JYJ20_RS00765;Name=JYJ20_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00765 NZ_JAFIRP010000001.1 Protein Homology CDS 138552 138779 . + 0 ID=cds-WP_020824201.1;Parent=gene-JYJ20_RS00765;Dbxref=GenBank:WP_020824201.1;Name=WP_020824201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249181.1;locus_tag=JYJ20_RS00765;product=hypothetical protein;protein_id=WP_020824201.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 138833 142399 . + . ID=gene-JYJ20_RS00770;Name=JYJ20_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00770 NZ_JAFIRP010000001.1 Protein Homology CDS 138833 142399 . + 0 ID=cds-WP_209025925.1;Parent=gene-JYJ20_RS00770;Dbxref=GenBank:WP_209025925.1;Name=WP_209025925.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249180.1;locus_tag=JYJ20_RS00770;product=phage tail tape measure protein;protein_id=WP_209025925.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 142399 142728 . + . ID=gene-JYJ20_RS00775;Name=JYJ20_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00775 NZ_JAFIRP010000001.1 Protein Homology CDS 142399 142728 . + 0 ID=cds-WP_006249179.1;Parent=gene-JYJ20_RS00775;Dbxref=GenBank:WP_006249179.1;Name=WP_006249179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249179.1;locus_tag=JYJ20_RS00775;product=phage tail protein;protein_id=WP_006249179.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 142728 143444 . + . ID=gene-JYJ20_RS00780;Name=JYJ20_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00780 NZ_JAFIRP010000001.1 Protein Homology CDS 142728 143444 . + 0 ID=cds-WP_209025926.1;Parent=gene-JYJ20_RS00780;Dbxref=GenBank:WP_209025926.1;Name=WP_209025926.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251213.1;locus_tag=JYJ20_RS00780;product=phage minor tail protein L;protein_id=WP_209025926.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 143448 144179 . + . ID=gene-JYJ20_RS00785;Name=JYJ20_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00785 NZ_JAFIRP010000001.1 Protein Homology CDS 143448 144179 . + 0 ID=cds-WP_209025927.1;Parent=gene-JYJ20_RS00785;Dbxref=GenBank:WP_209025927.1;Name=WP_209025927.1;Ontology_term=GO:0006508,GO:0008234,GO:0008235,GO:0008270;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248125.1;locus_tag=JYJ20_RS00785;product=C40 family peptidase;protein_id=WP_209025927.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 144320 144445 . + . ID=gene-JYJ20_RS12325;Name=JYJ20_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12325 NZ_JAFIRP010000001.1 Protein Homology CDS 144320 144445 . + 0 ID=cds-WP_015484176.1;Parent=gene-JYJ20_RS12325;Dbxref=GenBank:WP_015484176.1;Name=WP_015484176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484176.1;locus_tag=JYJ20_RS12325;product=hypothetical protein;protein_id=WP_015484176.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 144448 145038 . + . ID=gene-JYJ20_RS00790;Name=JYJ20_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00790 NZ_JAFIRP010000001.1 Protein Homology CDS 144448 145038 . + 0 ID=cds-WP_209025928.1;Parent=gene-JYJ20_RS00790;Dbxref=GenBank:WP_209025928.1;Name=WP_209025928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248123.1;locus_tag=JYJ20_RS00790;product=tail assembly protein;protein_id=WP_209025928.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 145041 152174 . + . ID=gene-JYJ20_RS00795;Name=gpJ;gbkey=Gene;gene=gpJ;gene_biotype=protein_coding;locus_tag=JYJ20_RS00795 NZ_JAFIRP010000001.1 Protein Homology CDS 145041 152174 . + 0 ID=cds-WP_209025929.1;Parent=gene-JYJ20_RS00795;Dbxref=GenBank:WP_209025929.1;Name=WP_209025929.1;gbkey=CDS;gene=gpJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253544.1;locus_tag=JYJ20_RS00795;product=TipJ family phage tail tip protein;protein_id=WP_209025929.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 152184 152342 . + . ID=gene-JYJ20_RS00800;Name=JYJ20_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00800 NZ_JAFIRP010000001.1 Protein Homology CDS 152184 152342 . + 0 ID=cds-WP_209025931.1;Parent=gene-JYJ20_RS00800;Dbxref=GenBank:WP_209025931.1;Name=WP_209025931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247809.1;locus_tag=JYJ20_RS00800;product=hypothetical protein;protein_id=WP_209025931.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 152351 152650 . - . ID=gene-JYJ20_RS00805;Name=JYJ20_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00805 NZ_JAFIRP010000001.1 Protein Homology CDS 152351 152650 . - 0 ID=cds-WP_006247810.1;Parent=gene-JYJ20_RS00805;Dbxref=GenBank:WP_006247810.1;Name=WP_006247810.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247810.1;locus_tag=JYJ20_RS00805;product=helix-turn-helix domain-containing protein;protein_id=WP_006247810.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 152622 153011 . - . ID=gene-JYJ20_RS00810;Name=JYJ20_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00810 NZ_JAFIRP010000001.1 Protein Homology CDS 152622 153011 . - 0 ID=cds-WP_006247811.1;Parent=gene-JYJ20_RS00810;Dbxref=GenBank:WP_006247811.1;Name=WP_006247811.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247811.1;locus_tag=JYJ20_RS00810;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_006247811.1;transl_table=11 NZ_JAFIRP010000001.1 RefSeq gene 153155 153448 . + . ID=gene-JYJ20_RS00815;Name=JYJ20_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00815 NZ_JAFIRP010000001.1 Protein Homology CDS 153155 153448 . + 0 ID=cds-WP_209025930.1;Parent=gene-JYJ20_RS00815;Dbxref=GenBank:WP_209025930.1;Name=WP_209025930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250050.1;locus_tag=JYJ20_RS00815;product=hypothetical protein;protein_id=WP_209025930.1;transl_table=11 ##sequence-region NZ_JAFIRP010000010.1 1 45851 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000010.1 RefSeq region 1 45851 . + . ID=NZ_JAFIRP010000010.1:1..45851;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000010.1 RefSeq gene 1 2131 . - . ID=gene-JYJ20_RS05005;Name=JYJ20_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05005;partial=true;start_range=.,1 NZ_JAFIRP010000010.1 Protein Homology CDS 1 2131 . - 0 ID=cds-WP_280633513.1;Parent=gene-JYJ20_RS05005;Dbxref=GenBank:WP_280633513.1;Name=WP_280633513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484777.1;locus_tag=JYJ20_RS05005;partial=true;product=ESPR-type extended signal peptide-containing protein;protein_id=WP_280633513.1;start_range=.,1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 2609 2839 . - . ID=gene-JYJ20_RS12105;Name=JYJ20_RS12105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12105 NZ_JAFIRP010000010.1 Protein Homology CDS 2609 2839 . - 0 ID=cds-WP_006248554.1;Parent=gene-JYJ20_RS12105;Dbxref=GenBank:WP_006248554.1;Name=WP_006248554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005720191.1;locus_tag=JYJ20_RS12105;product=hypothetical protein;protein_id=WP_006248554.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 2847 3590 . - . ID=gene-JYJ20_RS05010;Name=JYJ20_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05010 NZ_JAFIRP010000010.1 Protein Homology CDS 2847 3590 . - 0 ID=cds-WP_006248553.1;Parent=gene-JYJ20_RS05010;Dbxref=GenBank:WP_006248553.1;Name=WP_006248553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248553.1;locus_tag=JYJ20_RS05010;product=hypothetical protein;protein_id=WP_006248553.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 3761 4099 . - . ID=gene-JYJ20_RS05015;Name=JYJ20_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05015 NZ_JAFIRP010000010.1 Protein Homology CDS 3761 4099 . - 0 ID=cds-WP_006248552.1;Parent=gene-JYJ20_RS05015;Dbxref=GenBank:WP_006248552.1;Name=WP_006248552.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248552.1;locus_tag=JYJ20_RS05015;product=P-II family nitrogen regulator;protein_id=WP_006248552.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 4358 6256 . + . ID=gene-JYJ20_RS05020;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=JYJ20_RS05020 NZ_JAFIRP010000010.1 Protein Homology CDS 4358 6256 . + 0 ID=cds-WP_006248551.1;Parent=gene-JYJ20_RS05020;Dbxref=GenBank:WP_006248551.1;Name=WP_006248551.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005670448.1;locus_tag=JYJ20_RS05020;product=molecular chaperone DnaK;protein_id=WP_006248551.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 6398 6700 . + . ID=gene-JYJ20_RS05025;Name=JYJ20_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05025 NZ_JAFIRP010000010.1 Protein Homology CDS 6398 6700 . + 0 ID=cds-WP_006248550.1;Parent=gene-JYJ20_RS05025;Dbxref=GenBank:WP_006248550.1;Name=WP_006248550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252228.1;locus_tag=JYJ20_RS05025;product=hypothetical protein;protein_id=WP_006248550.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 6963 8102 . + . ID=gene-JYJ20_RS05030;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=JYJ20_RS05030 NZ_JAFIRP010000010.1 Protein Homology CDS 6963 8102 . + 0 ID=cds-WP_006248549.1;Parent=gene-JYJ20_RS05030;Dbxref=GenBank:WP_006248549.1;Name=WP_006248549.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015939959.1;locus_tag=JYJ20_RS05030;product=molecular chaperone DnaJ;protein_id=WP_006248549.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 8390 9898 . + . ID=gene-JYJ20_RS05035;Name=JYJ20_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05035 NZ_JAFIRP010000010.1 Protein Homology CDS 8390 9898 . + 0 ID=cds-WP_209026055.1;Parent=gene-JYJ20_RS05035;Dbxref=GenBank:WP_209026055.1;Name=WP_209026055.1;Ontology_term=GO:0004096,GO:0020037,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009119349.1;locus_tag=JYJ20_RS05035;product=catalase;protein_id=WP_209026055.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 9961 10182 . - . ID=gene-JYJ20_RS05040;Name=JYJ20_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05040 NZ_JAFIRP010000010.1 Protein Homology CDS 9961 10182 . - 0 ID=cds-WP_006248546.1;Parent=gene-JYJ20_RS05040;Dbxref=GenBank:WP_006248546.1;Name=WP_006248546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248546.1;locus_tag=JYJ20_RS05040;product=sulfurtransferase TusA family protein;protein_id=WP_006248546.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 10204 11232 . - . ID=gene-JYJ20_RS05045;Name=JYJ20_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05045 NZ_JAFIRP010000010.1 Protein Homology CDS 10204 11232 . - 0 ID=cds-WP_209026056.1;Parent=gene-JYJ20_RS05045;Dbxref=GenBank:WP_209026056.1;Name=WP_209026056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005697908.1;locus_tag=JYJ20_RS05045;product=YeeE/YedE family protein;protein_id=WP_209026056.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 11339 12673 . - . ID=gene-JYJ20_RS05050;Name=JYJ20_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05050 NZ_JAFIRP010000010.1 Protein Homology CDS 11339 12673 . - 0 ID=cds-WP_006248544.1;Parent=gene-JYJ20_RS05050;Dbxref=GenBank:WP_006248544.1;Name=WP_006248544.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248544.1;locus_tag=JYJ20_RS05050;product=cation:proton antiporter;protein_id=WP_006248544.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 12784 13932 . - . ID=gene-JYJ20_RS05055;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=JYJ20_RS05055 NZ_JAFIRP010000010.1 Protein Homology CDS 12784 13932 . - 0 ID=cds-WP_006248543.1;Parent=gene-JYJ20_RS05055;Dbxref=GenBank:WP_006248543.1;Name=WP_006248543.1;Ontology_term=GO:0009085,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252233.1;locus_tag=JYJ20_RS05055;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_006248543.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 14062 14409 . - . ID=gene-JYJ20_RS05060;Name=JYJ20_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05060 NZ_JAFIRP010000010.1 Protein Homology CDS 14062 14409 . - 0 ID=cds-WP_006248542.1;Parent=gene-JYJ20_RS05060;Dbxref=GenBank:WP_006248542.1;Name=WP_006248542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248542.1;locus_tag=JYJ20_RS05060;product=ArsC family reductase;protein_id=WP_006248542.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 14409 15266 . - . ID=gene-JYJ20_RS05065;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=JYJ20_RS05065 NZ_JAFIRP010000010.1 Protein Homology CDS 14409 15266 . - 0 ID=cds-WP_006248541.1;Parent=gene-JYJ20_RS05065;Dbxref=GenBank:WP_006248541.1;Name=WP_006248541.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248541.1;locus_tag=JYJ20_RS05065;product=dihydropteroate synthase;protein_id=WP_006248541.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 15375 16337 . - . ID=gene-JYJ20_RS05070;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=JYJ20_RS05070 NZ_JAFIRP010000010.1 Protein Homology CDS 15375 16337 . - 0 ID=cds-WP_006248540.1;Parent=gene-JYJ20_RS05070;Dbxref=GenBank:WP_006248540.1;Name=WP_006248540.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248540.1;locus_tag=JYJ20_RS05070;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_006248540.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 16446 17348 . + . ID=gene-JYJ20_RS05075;Name=JYJ20_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05075 NZ_JAFIRP010000010.1 Protein Homology CDS 16446 17348 . + 0 ID=cds-WP_134916436.1;Parent=gene-JYJ20_RS05075;Dbxref=GenBank:WP_134916436.1;Name=WP_134916436.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248539.1;locus_tag=JYJ20_RS05075;product=mechanosensitive ion channel family protein;protein_id=WP_134916436.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 17446 17943 . + . ID=gene-JYJ20_RS05080;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=JYJ20_RS05080 NZ_JAFIRP010000010.1 Protein Homology CDS 17446 17943 . + 0 ID=cds-WP_006248538.1;Parent=gene-JYJ20_RS05080;Dbxref=GenBank:WP_006248538.1;Name=WP_006248538.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992278.1;locus_tag=JYJ20_RS05080;product=ribonuclease E activity regulator RraA;protein_id=WP_006248538.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 17991 19352 . - . ID=gene-JYJ20_RS05085;Name=JYJ20_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05085 NZ_JAFIRP010000010.1 Protein Homology CDS 17991 19352 . - 0 ID=cds-WP_006248537.1;Parent=gene-JYJ20_RS05085;Dbxref=GenBank:WP_006248537.1;Name=WP_006248537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248537.1;locus_tag=JYJ20_RS05085;product=patatin-like phospholipase family protein;protein_id=WP_006248537.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 19544 20095 . + . ID=gene-JYJ20_RS05090;Name=JYJ20_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05090 NZ_JAFIRP010000010.1 Protein Homology CDS 19544 20095 . + 0 ID=cds-WP_006252239.1;Parent=gene-JYJ20_RS05090;Dbxref=GenBank:WP_006252239.1;Name=WP_006252239.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252239.1;locus_tag=JYJ20_RS05090;product=NADPH-dependent FMN reductase;protein_id=WP_006252239.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 20165 21073 . - . ID=gene-JYJ20_RS05095;Name=JYJ20_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05095 NZ_JAFIRP010000010.1 Protein Homology CDS 20165 21073 . - 0 ID=cds-WP_209026057.1;Parent=gene-JYJ20_RS05095;Dbxref=GenBank:WP_209026057.1;Name=WP_209026057.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248535.1;locus_tag=JYJ20_RS05095;product=LysR family transcriptional regulator;protein_id=WP_209026057.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 21164 22225 . + . ID=gene-JYJ20_RS05100;Name=JYJ20_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05100 NZ_JAFIRP010000010.1 Protein Homology CDS 21164 22225 . + 0 ID=cds-WP_209026058.1;Parent=gene-JYJ20_RS05100;Dbxref=GenBank:WP_209026058.1;Name=WP_209026058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015431667.1;locus_tag=JYJ20_RS05100;product=NADH:flavin oxidoreductase/NADH oxidase;protein_id=WP_209026058.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 22409 23068 . + . ID=gene-JYJ20_RS05105;Name=JYJ20_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05105 NZ_JAFIRP010000010.1 Protein Homology CDS 22409 23068 . + 0 ID=cds-WP_209026059.1;Parent=gene-JYJ20_RS05105;Dbxref=GenBank:WP_209026059.1;Name=WP_209026059.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248533.1;locus_tag=JYJ20_RS05105;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_209026059.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 23204 24121 . + . ID=gene-JYJ20_RS05110;Name=JYJ20_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05110 NZ_JAFIRP010000010.1 Protein Homology CDS 23204 24121 . + 0 ID=cds-WP_209026060.1;Parent=gene-JYJ20_RS05110;Dbxref=GenBank:WP_209026060.1;Name=WP_209026060.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248532.1;locus_tag=JYJ20_RS05110;product=DMT family transporter;protein_id=WP_209026060.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 24335 24553 . + . ID=gene-JYJ20_RS12110;Name=JYJ20_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12110 NZ_JAFIRP010000010.1 Protein Homology CDS 24335 24553 . + 0 ID=cds-WP_226318139.1;Parent=gene-JYJ20_RS12110;Dbxref=GenBank:WP_226318139.1;Name=WP_226318139.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019845.7;locus_tag=JYJ20_RS12110;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_226318139.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 24605 25318 . + . ID=gene-JYJ20_RS12115;Name=JYJ20_RS12115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12115 NZ_JAFIRP010000010.1 Protein Homology CDS 24605 25318 . + 0 ID=cds-WP_425331217.1;Parent=gene-JYJ20_RS12115;Dbxref=GenBank:WP_425331217.1;Name=WP_425331217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005628508.1;locus_tag=JYJ20_RS12115;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_425331217.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 25384 25944 . - . ID=gene-JYJ20_RS05120;Name=JYJ20_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05120 NZ_JAFIRP010000010.1 Protein Homology CDS 25384 25944 . - 0 ID=cds-WP_006248530.1;Parent=gene-JYJ20_RS05120;Dbxref=GenBank:WP_006248530.1;Name=WP_006248530.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248530.1;locus_tag=JYJ20_RS05120;product=TetR/AcrR family transcriptional regulator;protein_id=WP_006248530.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 26076 26918 . + . ID=gene-JYJ20_RS05125;Name=JYJ20_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05125 NZ_JAFIRP010000010.1 Protein Homology CDS 26076 26918 . + 0 ID=cds-WP_209026061.1;Parent=gene-JYJ20_RS05125;Dbxref=GenBank:WP_209026061.1;Name=WP_209026061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252929.1;locus_tag=JYJ20_RS05125;product=N-acyl homoserine lactonase family protein;protein_id=WP_209026061.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 27101 28036 . + . ID=gene-JYJ20_RS05130;Name=JYJ20_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05130 NZ_JAFIRP010000010.1 Protein Homology CDS 27101 28036 . + 0 ID=cds-WP_006248528.1;Parent=gene-JYJ20_RS05130;Dbxref=GenBank:WP_006248528.1;Name=WP_006248528.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248528.1;locus_tag=JYJ20_RS05130;product=TIGR03571 family LLM class oxidoreductase;protein_id=WP_006248528.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 28223 29281 . + . ID=gene-JYJ20_RS05135;Name=JYJ20_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05135 NZ_JAFIRP010000010.1 Protein Homology CDS 28223 29281 . + 0 ID=cds-WP_209026062.1;Parent=gene-JYJ20_RS05135;Dbxref=GenBank:WP_209026062.1;Name=WP_209026062.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253650.1;locus_tag=JYJ20_RS05135;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_209026062.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 29361 30191 . + . ID=gene-JYJ20_RS05140;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=JYJ20_RS05140 NZ_JAFIRP010000010.1 Protein Homology CDS 29361 30191 . + 0 ID=cds-WP_006248527.1;Parent=gene-JYJ20_RS05140;Dbxref=GenBank:WP_006248527.1;Name=WP_006248527.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248527.1;locus_tag=JYJ20_RS05140;product=S-formylglutathione hydrolase;protein_id=WP_006248527.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 30444 30830 . + . ID=gene-JYJ20_RS05145;Name=JYJ20_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05145 NZ_JAFIRP010000010.1 GeneMarkS-2+ CDS 30444 30830 . + 0 ID=cds-WP_020849896.1;Parent=gene-JYJ20_RS05145;Dbxref=GenBank:WP_020849896.1;Name=WP_020849896.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS05145;product=hypothetical protein;protein_id=WP_020849896.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 30905 31174 . + . ID=gene-JYJ20_RS05150;Name=JYJ20_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05150 NZ_JAFIRP010000010.1 Protein Homology CDS 30905 31174 . + 0 ID=cds-WP_015484037.1;Parent=gene-JYJ20_RS05150;Dbxref=GenBank:WP_015484037.1;Name=WP_015484037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484037.1;locus_tag=JYJ20_RS05150;product=hypothetical protein;protein_id=WP_015484037.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 31228 32373 . - . ID=gene-JYJ20_RS05155;Name=lldD;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=JYJ20_RS05155 NZ_JAFIRP010000010.1 Protein Homology CDS 31228 32373 . - 0 ID=cds-WP_006248526.1;Parent=gene-JYJ20_RS05155;Dbxref=GenBank:WP_006248526.1;Name=WP_006248526.1;Ontology_term=GO:0006089,GO:0004457,GO:0010181;gbkey=CDS;gene=lldD;go_function=lactate dehydrogenase activity|0004457||IEA,FMN binding|0010181||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674093.1;locus_tag=JYJ20_RS05155;product=FMN-dependent L-lactate dehydrogenase LldD;protein_id=WP_006248526.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 32985 33629 . + . ID=gene-JYJ20_RS05160;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=JYJ20_RS05160 NZ_JAFIRP010000010.1 Protein Homology CDS 32985 33629 . + 0 ID=cds-WP_006248521.1;Parent=gene-JYJ20_RS05160;Dbxref=GenBank:WP_006248521.1;Name=WP_006248521.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248521.1;locus_tag=JYJ20_RS05160;product=RNA pyrophosphohydrolase;protein_id=WP_006248521.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 33631 34419 . + . ID=gene-JYJ20_RS05165;Name=JYJ20_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05165 NZ_JAFIRP010000010.1 Protein Homology CDS 33631 34419 . + 0 ID=cds-WP_006248520.1;Parent=gene-JYJ20_RS05165;Dbxref=GenBank:WP_006248520.1;Name=WP_006248520.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248520.1;locus_tag=JYJ20_RS05165;product=sulfite exporter TauE/SafE family protein;protein_id=WP_006248520.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 34427 35224 . + . ID=gene-JYJ20_RS05170;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=JYJ20_RS05170 NZ_JAFIRP010000010.1 Protein Homology CDS 34427 35224 . + 0 ID=cds-WP_006248519.1;Parent=gene-JYJ20_RS05170;Dbxref=GenBank:WP_006248519.1;Name=WP_006248519.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248519.1;locus_tag=JYJ20_RS05170;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_006248519.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 35311 35979 . + . ID=gene-JYJ20_RS05175;Name=JYJ20_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05175 NZ_JAFIRP010000010.1 Protein Homology CDS 35311 35979 . + 0 ID=cds-WP_006248518.1;Parent=gene-JYJ20_RS05175;Dbxref=GenBank:WP_006248518.1;Name=WP_006248518.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248518.1;locus_tag=JYJ20_RS05175;product=phosphoglycolate phosphatase;protein_id=WP_006248518.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 36049 36309 . + . ID=gene-JYJ20_RS05180;Name=JYJ20_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05180 NZ_JAFIRP010000010.1 Protein Homology CDS 36049 36309 . + 0 ID=cds-WP_006248517.1;Parent=gene-JYJ20_RS05180;Dbxref=GenBank:WP_006248517.1;Name=WP_006248517.1;Ontology_term=GO:0003677,GO:0097351;gbkey=CDS;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248517.1;locus_tag=JYJ20_RS05180;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_006248517.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 36306 36638 . + . ID=gene-JYJ20_RS05185;Name=JYJ20_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05185 NZ_JAFIRP010000010.1 Protein Homology CDS 36306 36638 . + 0 ID=cds-WP_006248516.1;Parent=gene-JYJ20_RS05185;Dbxref=GenBank:WP_006248516.1;Name=WP_006248516.1;Ontology_term=GO:0006402,GO:0016075,GO:0003677,GO:0003723,GO:0004521;gbkey=CDS;go_function=DNA binding|0003677||IEA,RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA,rRNA catabolic process|0016075||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248516.1;locus_tag=JYJ20_RS05185;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WP_006248516.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 36765 37796 . + . ID=gene-JYJ20_RS05190;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=JYJ20_RS05190 NZ_JAFIRP010000010.1 Protein Homology CDS 36765 37796 . + 0 ID=cds-WP_209026063.1;Parent=gene-JYJ20_RS05190;Dbxref=GenBank:WP_209026063.1;Name=WP_209026063.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248514.1;locus_tag=JYJ20_RS05190;product=tryptophan--tRNA ligase;protein_id=WP_209026063.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 37860 38615 . - . ID=gene-JYJ20_RS05195;Name=JYJ20_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05195 NZ_JAFIRP010000010.1 Protein Homology CDS 37860 38615 . - 0 ID=cds-WP_006248513.1;Parent=gene-JYJ20_RS05195;Dbxref=GenBank:WP_006248513.1;Name=WP_006248513.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248513.1;locus_tag=JYJ20_RS05195;product=M48 family metallopeptidase;protein_id=WP_006248513.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 38671 39198 . - . ID=gene-JYJ20_RS05200;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=JYJ20_RS05200 NZ_JAFIRP010000010.1 Protein Homology CDS 38671 39198 . - 0 ID=cds-WP_006248512.1;Parent=gene-JYJ20_RS05200;Dbxref=GenBank:WP_006248512.1;Name=WP_006248512.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944216.1;locus_tag=JYJ20_RS05200;product=inorganic diphosphatase;protein_id=WP_006248512.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 39415 39490 . + . ID=gene-JYJ20_RS05205;Name=JYJ20_RS05205;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS05205 NZ_JAFIRP010000010.1 tRNAscan-SE tRNA 39415 39490 . + . ID=rna-JYJ20_RS05205;Parent=gene-JYJ20_RS05205;anticodon=(pos:39448..39450);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS05205;product=tRNA-Lys NZ_JAFIRP010000010.1 tRNAscan-SE exon 39415 39490 . + . ID=exon-JYJ20_RS05205-1;Parent=rna-JYJ20_RS05205;anticodon=(pos:39448..39450);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS05205;product=tRNA-Lys NZ_JAFIRP010000010.1 RefSeq gene 39583 40617 . + . ID=gene-JYJ20_RS05210;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=JYJ20_RS05210 NZ_JAFIRP010000010.1 Protein Homology CDS 39583 40617 . + 0 ID=cds-WP_006248509.1;Parent=gene-JYJ20_RS05210;Dbxref=GenBank:WP_006248509.1;Name=WP_006248509.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613374.1;locus_tag=JYJ20_RS05210;product=endolytic transglycosylase MltG;protein_id=WP_006248509.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 40628 41248 . + . ID=gene-JYJ20_RS05215;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=JYJ20_RS05215 NZ_JAFIRP010000010.1 Protein Homology CDS 40628 41248 . + 0 ID=cds-WP_006248508.1;Parent=gene-JYJ20_RS05215;Dbxref=GenBank:WP_006248508.1;Name=WP_006248508.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248508.1;locus_tag=JYJ20_RS05215;product=dTMP kinase;protein_id=WP_006248508.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 41248 42225 . + . ID=gene-JYJ20_RS05220;Name=JYJ20_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05220 NZ_JAFIRP010000010.1 Protein Homology CDS 41248 42225 . + 0 ID=cds-WP_006248507.1;Parent=gene-JYJ20_RS05220;Dbxref=GenBank:WP_006248507.1;Name=WP_006248507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248507.1;locus_tag=JYJ20_RS05220;product=DNA polymerase III subunit delta';protein_id=WP_006248507.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 42356 42598 . + . ID=gene-JYJ20_RS05225;Name=JYJ20_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05225 NZ_JAFIRP010000010.1 Protein Homology CDS 42356 42598 . + 0 ID=cds-WP_006248506.1;Parent=gene-JYJ20_RS05225;Dbxref=GenBank:WP_006248506.1;Name=WP_006248506.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248506.1;locus_tag=JYJ20_RS05225;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_006248506.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 42591 42875 . + . ID=gene-JYJ20_RS05230;Name=JYJ20_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05230 NZ_JAFIRP010000010.1 Protein Homology CDS 42591 42875 . + 0 ID=cds-WP_006251108.1;Parent=gene-JYJ20_RS05230;Dbxref=GenBank:WP_006251108.1;Name=WP_006251108.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248505.1;locus_tag=JYJ20_RS05230;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_006251108.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 42880 43668 . + . ID=gene-JYJ20_RS05235;Name=JYJ20_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05235 NZ_JAFIRP010000010.1 Protein Homology CDS 42880 43668 . + 0 ID=cds-WP_006251109.1;Parent=gene-JYJ20_RS05235;Dbxref=GenBank:WP_006251109.1;Name=WP_006251109.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992335.1;locus_tag=JYJ20_RS05235;product=TatD family hydrolase;protein_id=WP_006251109.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 43678 44199 . + . ID=gene-JYJ20_RS05240;Name=JYJ20_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05240 NZ_JAFIRP010000010.1 Protein Homology CDS 43678 44199 . + 0 ID=cds-WP_006249623.1;Parent=gene-JYJ20_RS05240;Dbxref=GenBank:WP_006249623.1;Name=WP_006249623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252906.1;locus_tag=JYJ20_RS05240;product=DUF1523 family protein;protein_id=WP_006249623.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq gene 44274 44975 . + . ID=gene-JYJ20_RS05245;Name=lpxH;gbkey=Gene;gene=lpxH;gene_biotype=protein_coding;locus_tag=JYJ20_RS05245 NZ_JAFIRP010000010.1 Protein Homology CDS 44274 44975 . + 0 ID=cds-WP_006249624.1;Parent=gene-JYJ20_RS05245;Dbxref=GenBank:WP_006249624.1;Name=WP_006249624.1;Ontology_term=GO:0009245,GO:0008758,GO:0016462,GO:0005737;gbkey=CDS;gene=lpxH;go_component=cytoplasm|0005737||IEA;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249624.1;locus_tag=JYJ20_RS05245;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_006249624.1;transl_table=11 NZ_JAFIRP010000010.1 RefSeq pseudogene 44972 45762 . + . ID=gene-JYJ20_RS05250;Name=JYJ20_RS05250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS05250;pseudo=true NZ_JAFIRP010000010.1 Protein Homology CDS 44972 45762 . + 0 ID=cds-JYJ20_RS05250;Parent=gene-JYJ20_RS05250;Note=frameshifted;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618283.1;locus_tag=JYJ20_RS05250;product=glycosyltransferase family A protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAFIRP010000011.1 1 122378 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000011.1 RefSeq region 1 122378 . + . ID=NZ_JAFIRP010000011.1:1..122378;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000011.1 RefSeq gene 1 640 . - . ID=gene-JYJ20_RS05255;Name=JYJ20_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05255;partial=true;start_range=.,1 NZ_JAFIRP010000011.1 Protein Homology CDS 1 640 . - 0 ID=cds-WP_209026064.1;Parent=gene-JYJ20_RS05255;Dbxref=GenBank:WP_209026064.1;Name=WP_209026064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484098.1;locus_tag=JYJ20_RS05255;partial=true;product=lipoprotein Hlp;protein_id=WP_209026064.1;start_range=.,1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 707 1291 . - . ID=gene-JYJ20_RS05260;Name=JYJ20_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05260 NZ_JAFIRP010000011.1 Protein Homology CDS 707 1291 . - 0 ID=cds-WP_006249936.1;Parent=gene-JYJ20_RS05260;Dbxref=GenBank:WP_006249936.1;Name=WP_006249936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249936.1;locus_tag=JYJ20_RS05260;product=hypothetical protein;protein_id=WP_006249936.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 1423 2607 . - . ID=gene-JYJ20_RS05265;Name=JYJ20_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05265 NZ_JAFIRP010000011.1 Protein Homology CDS 1423 2607 . - 0 ID=cds-WP_006249937.1;Parent=gene-JYJ20_RS05265;Dbxref=GenBank:WP_006249937.1;Name=WP_006249937.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249937.1;locus_tag=JYJ20_RS05265;product=FAD-dependent monooxygenase;protein_id=WP_006249937.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 2690 3553 . - . ID=gene-JYJ20_RS05270;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=JYJ20_RS05270 NZ_JAFIRP010000011.1 Protein Homology CDS 2690 3553 . - 0 ID=cds-WP_006249938.1;Parent=gene-JYJ20_RS05270;Dbxref=GenBank:WP_006249938.1;Name=WP_006249938.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600433.1;locus_tag=JYJ20_RS05270;product=RNase adapter RapZ;protein_id=WP_006249938.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 3566 4078 . - . ID=gene-JYJ20_RS05275;Name=JYJ20_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05275 NZ_JAFIRP010000011.1 Protein Homology CDS 3566 4078 . - 0 ID=cds-WP_006249939.1;Parent=gene-JYJ20_RS05275;Dbxref=GenBank:WP_006249939.1;Name=WP_006249939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249939.1;locus_tag=JYJ20_RS05275;product=PTS sugar transporter subunit IIA;protein_id=WP_006249939.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 4120 4845 . - . ID=gene-JYJ20_RS05280;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=JYJ20_RS05280 NZ_JAFIRP010000011.1 Protein Homology CDS 4120 4845 . - 0 ID=cds-WP_006249940.1;Parent=gene-JYJ20_RS05280;Dbxref=GenBank:WP_006249940.1;Name=WP_006249940.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005701231.1;locus_tag=JYJ20_RS05280;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_006249940.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 4857 5363 . - . ID=gene-JYJ20_RS05285;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=JYJ20_RS05285 NZ_JAFIRP010000011.1 Protein Homology CDS 4857 5363 . - 0 ID=cds-WP_006252151.1;Parent=gene-JYJ20_RS05285;Dbxref=GenBank:WP_006252151.1;Name=WP_006252151.1;Ontology_term=GO:0015920,GO:0001530,GO:0042597;gbkey=CDS;gene=lptA;go_component=periplasmic space|0042597||IEA;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252151.1;locus_tag=JYJ20_RS05285;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=WP_006252151.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 5387 5971 . - . ID=gene-JYJ20_RS05290;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=JYJ20_RS05290 NZ_JAFIRP010000011.1 Protein Homology CDS 5387 5971 . - 0 ID=cds-WP_006252152.1;Parent=gene-JYJ20_RS05290;Dbxref=GenBank:WP_006252152.1;Name=WP_006252152.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptC;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252152.1;locus_tag=JYJ20_RS05290;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_006252152.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 6125 6928 . - . ID=gene-JYJ20_RS05295;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=JYJ20_RS05295 NZ_JAFIRP010000011.1 Protein Homology CDS 6125 6928 . - 0 ID=cds-WP_006253743.1;Parent=gene-JYJ20_RS05295;Dbxref=GenBank:WP_006253743.1;Name=WP_006253743.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652774.1;locus_tag=JYJ20_RS05295;product=exodeoxyribonuclease III;protein_id=WP_006253743.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 7026 8402 . - . ID=gene-JYJ20_RS05300;Name=JYJ20_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05300 NZ_JAFIRP010000011.1 Protein Homology CDS 7026 8402 . - 0 ID=cds-WP_006253742.1;Parent=gene-JYJ20_RS05300;Dbxref=GenBank:WP_006253742.1;Name=WP_006253742.1;Ontology_term=GO:0006810;gbkey=CDS;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617456.1;locus_tag=JYJ20_RS05300;product=Na+/H+ antiporter family protein;protein_id=WP_006253742.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 8620 10281 . + . ID=gene-JYJ20_RS05305;Name=JYJ20_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05305 NZ_JAFIRP010000011.1 Protein Homology CDS 8620 10281 . + 0 ID=cds-WP_006253741.1;Parent=gene-JYJ20_RS05305;Dbxref=GenBank:WP_006253741.1;Name=WP_006253741.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253741.1;locus_tag=JYJ20_RS05305;product=putative transporter;protein_id=WP_006253741.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 10346 12424 . - . ID=gene-JYJ20_RS05310;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=JYJ20_RS05310 NZ_JAFIRP010000011.1 Protein Homology CDS 10346 12424 . - 0 ID=cds-WP_006248009.1;Parent=gene-JYJ20_RS05310;Dbxref=GenBank:WP_006248009.1;Name=WP_006248009.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248009.1;locus_tag=JYJ20_RS05310;product=4-alpha-glucanotransferase;protein_id=WP_006248009.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 12506 14875 . - . ID=gene-JYJ20_RS05315;Name=malP;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=JYJ20_RS05315 NZ_JAFIRP010000011.1 Protein Homology CDS 12506 14875 . - 0 ID=cds-WP_006248008.1;Parent=gene-JYJ20_RS05315;Dbxref=GenBank:WP_006248008.1;Name=WP_006248008.1;Ontology_term=GO:0005975,GO:0008184,GO:0030170;gbkey=CDS;gene=malP;go_function=glycogen phosphorylase activity|0008184||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248008.1;locus_tag=JYJ20_RS05315;product=maltodextrin phosphorylase;protein_id=WP_006248008.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 15039 17765 . + . ID=gene-JYJ20_RS05320;Name=malT;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=JYJ20_RS05320 NZ_JAFIRP010000011.1 Protein Homology CDS 15039 17765 . + 0 ID=cds-WP_006248007.1;Parent=gene-JYJ20_RS05320;Dbxref=GenBank:WP_006248007.1;Name=WP_006248007.1;Ontology_term=GO:0006355,GO:0003677,GO:0005515;gbkey=CDS;gene=malT;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248007.1;locus_tag=JYJ20_RS05320;product=HTH-type transcriptional regulator MalT;protein_id=WP_006248007.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 17879 19936 . - . ID=gene-JYJ20_RS05325;Name=JYJ20_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05325 NZ_JAFIRP010000011.1 Protein Homology CDS 17879 19936 . - 0 ID=cds-WP_209026065.1;Parent=gene-JYJ20_RS05325;Dbxref=GenBank:WP_209026065.1;Name=WP_209026065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248006.1;locus_tag=JYJ20_RS05325;product=alpha-amylase;protein_id=WP_209026065.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 20011 20901 . - . ID=gene-JYJ20_RS05330;Name=malG;gbkey=Gene;gene=malG;gene_biotype=protein_coding;locus_tag=JYJ20_RS05330 NZ_JAFIRP010000011.1 Protein Homology CDS 20011 20901 . - 0 ID=cds-WP_006248005.1;Parent=gene-JYJ20_RS05330;Dbxref=GenBank:WP_006248005.1;Name=WP_006248005.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=malG;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011978969.1;locus_tag=JYJ20_RS05330;product=maltose ABC transporter permease MalG;protein_id=WP_006248005.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 20954 22492 . - . ID=gene-JYJ20_RS05335;Name=malF;gbkey=Gene;gene=malF;gene_biotype=protein_coding;locus_tag=JYJ20_RS05335 NZ_JAFIRP010000011.1 Protein Homology CDS 20954 22492 . - 0 ID=cds-WP_006248004.1;Parent=gene-JYJ20_RS05335;Dbxref=GenBank:WP_006248004.1;Name=WP_006248004.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=malF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248004.1;locus_tag=JYJ20_RS05335;product=maltose ABC transporter permease MalF;protein_id=WP_006248004.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 22611 23801 . - . ID=gene-JYJ20_RS05340;Name=malE;gbkey=Gene;gene=malE;gene_biotype=protein_coding;locus_tag=JYJ20_RS05340 NZ_JAFIRP010000011.1 Protein Homology CDS 22611 23801 . - 0 ID=cds-WP_006248003.1;Parent=gene-JYJ20_RS05340;Dbxref=GenBank:WP_006248003.1;Name=WP_006248003.1;Ontology_term=GO:0008643,GO:0055085,GO:0015144;gbkey=CDS;gene=malE;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005537801.1;locus_tag=JYJ20_RS05340;product=maltose/maltodextrin ABC transporter substrate-binding protein MalE;protein_id=WP_006248003.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 24171 25289 . + . ID=gene-JYJ20_RS05345;Name=malK;gbkey=Gene;gene=malK;gene_biotype=protein_coding;locus_tag=JYJ20_RS05345 NZ_JAFIRP010000011.1 Protein Homology CDS 24171 25289 . + 0 ID=cds-WP_006248002.1;Parent=gene-JYJ20_RS05345;Dbxref=GenBank:WP_006248002.1;Name=WP_006248002.1;Ontology_term=GO:0008643,GO:0055085,GO:0005524,GO:0140359,GO:0043190;gbkey=CDS;gene=malK;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005552148.1;locus_tag=JYJ20_RS05345;product=maltose/maltodextrin ABC transporter ATP-binding protein MalK;protein_id=WP_006248002.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 25387 26676 . + . ID=gene-JYJ20_RS05350;Name=JYJ20_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05350 NZ_JAFIRP010000011.1 Protein Homology CDS 25387 26676 . + 0 ID=cds-WP_006248001.1;Parent=gene-JYJ20_RS05350;Dbxref=GenBank:WP_006248001.1;Name=WP_006248001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248001.1;locus_tag=JYJ20_RS05350;product=maltoporin;protein_id=WP_006248001.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 26757 27653 . + . ID=gene-JYJ20_RS05355;Name=malM;gbkey=Gene;gene=malM;gene_biotype=protein_coding;locus_tag=JYJ20_RS05355 NZ_JAFIRP010000011.1 Protein Homology CDS 26757 27653 . + 0 ID=cds-WP_006248000.1;Parent=gene-JYJ20_RS05355;Dbxref=GenBank:WP_006248000.1;Name=WP_006248000.1;Ontology_term=GO:0008643,GO:0042597;gbkey=CDS;gene=malM;go_component=periplasmic space|0042597||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248000.1;locus_tag=JYJ20_RS05355;product=maltose operon protein MalM;protein_id=WP_006248000.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 27813 29681 . - . ID=gene-JYJ20_RS05360;Name=JYJ20_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05360 NZ_JAFIRP010000011.1 Protein Homology CDS 27813 29681 . - 0 ID=cds-WP_006247999.1;Parent=gene-JYJ20_RS05360;Dbxref=GenBank:WP_006247999.1;Name=WP_006247999.1;Ontology_term=GO:0006812,GO:1902600,GO:0051139,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247999.1;locus_tag=JYJ20_RS05360;product=monovalent cation:proton antiporter-2 (CPA2) family protein;protein_id=WP_006247999.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 29712 32249 . - . ID=gene-JYJ20_RS05365;Name=JYJ20_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05365 NZ_JAFIRP010000011.1 Protein Homology CDS 29712 32249 . - 0 ID=cds-WP_006253738.1;Parent=gene-JYJ20_RS05365;Dbxref=GenBank:WP_006253738.1;Name=WP_006253738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253738.1;locus_tag=JYJ20_RS05365;product=class I adenylate cyclase;protein_id=WP_006253738.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 32510 33727 . + . ID=gene-JYJ20_RS05370;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=JYJ20_RS05370 NZ_JAFIRP010000011.1 Protein Homology CDS 32510 33727 . + 0 ID=cds-WP_006247997.1;Parent=gene-JYJ20_RS05370;Dbxref=GenBank:WP_006247997.1;Name=WP_006247997.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247997.1;locus_tag=JYJ20_RS05370;product=beta-ketoacyl-ACP synthase I;protein_id=WP_006247997.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 33845 33991 . + . ID=gene-JYJ20_RS05375;Name=JYJ20_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05375 NZ_JAFIRP010000011.1 Protein Homology CDS 33845 33991 . + 0 ID=cds-WP_006252169.1;Parent=gene-JYJ20_RS05375;Dbxref=GenBank:WP_006252169.1;Name=WP_006252169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252169.1;locus_tag=JYJ20_RS05375;product=hypothetical protein;protein_id=WP_006252169.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 33960 34670 . + . ID=gene-JYJ20_RS05380;Name=JYJ20_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05380 NZ_JAFIRP010000011.1 Protein Homology CDS 33960 34670 . + 0 ID=cds-WP_006247995.1;Parent=gene-JYJ20_RS05380;Dbxref=GenBank:WP_006247995.1;Name=WP_006247995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247995.1;locus_tag=JYJ20_RS05380;product=DUF4189 domain-containing protein;protein_id=WP_006247995.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 34994 36262 . + . ID=gene-JYJ20_RS05385;Name=JYJ20_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05385 NZ_JAFIRP010000011.1 Protein Homology CDS 34994 36262 . + 0 ID=cds-WP_006247994.1;Parent=gene-JYJ20_RS05385;Dbxref=GenBank:WP_006247994.1;Name=WP_006247994.1;Ontology_term=GO:0030001,GO:0046872,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA,metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252172.1;locus_tag=JYJ20_RS05385;product=NRAMP family divalent metal transporter;protein_id=WP_006247994.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 36325 38382 . - . ID=gene-JYJ20_RS05390;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=JYJ20_RS05390 NZ_JAFIRP010000011.1 Protein Homology CDS 36325 38382 . - 0 ID=cds-WP_006253737.1;Parent=gene-JYJ20_RS05390;Dbxref=GenBank:WP_006253737.1;Name=WP_006253737.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252997.1;locus_tag=JYJ20_RS05390;product=NAD-dependent DNA ligase LigA;protein_id=WP_006253737.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 38447 39349 . - . ID=gene-JYJ20_RS05395;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=JYJ20_RS05395 NZ_JAFIRP010000011.1 Protein Homology CDS 38447 39349 . - 0 ID=cds-WP_006247992.1;Parent=gene-JYJ20_RS05395;Dbxref=GenBank:WP_006247992.1;Name=WP_006247992.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247992.1;locus_tag=JYJ20_RS05395;product=cell division protein ZipA;protein_id=WP_006247992.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 39461 40342 . + . ID=gene-JYJ20_RS05400;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=JYJ20_RS05400 NZ_JAFIRP010000011.1 Protein Homology CDS 39461 40342 . + 0 ID=cds-WP_006252175.1;Parent=gene-JYJ20_RS05400;Dbxref=GenBank:WP_006252175.1;Name=WP_006252175.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252175.1;locus_tag=JYJ20_RS05400;product=sulfate transporter CysZ;protein_id=WP_006252175.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 40411 41322 . - . ID=gene-JYJ20_RS05405;Name=JYJ20_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05405 NZ_JAFIRP010000011.1 Protein Homology CDS 40411 41322 . - 0 ID=cds-WP_006247990.1;Parent=gene-JYJ20_RS05405;Dbxref=GenBank:WP_006247990.1;Name=WP_006247990.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247990.1;locus_tag=JYJ20_RS05405;product=TonB family protein;protein_id=WP_006247990.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 41338 41775 . - . ID=gene-JYJ20_RS05410;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=JYJ20_RS05410 NZ_JAFIRP010000011.1 Protein Homology CDS 41338 41775 . - 0 ID=cds-WP_006247989.1;Parent=gene-JYJ20_RS05410;Dbxref=GenBank:WP_006247989.1;Name=WP_006247989.1;Ontology_term=GO:0006810,GO:0015291,GO:0016020;gbkey=CDS;gene=exbD;go_component=membrane|0016020||IEA;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247989.1;locus_tag=JYJ20_RS05410;product=TonB system transport protein ExbD;protein_id=WP_006247989.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 41812 42270 . - . ID=gene-JYJ20_RS05415;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=JYJ20_RS05415 NZ_JAFIRP010000011.1 Protein Homology CDS 41812 42270 . - 0 ID=cds-WP_006247988.1;Parent=gene-JYJ20_RS05415;Dbxref=GenBank:WP_006247988.1;Name=WP_006247988.1;Ontology_term=GO:0055085,GO:0015078,GO:0016020;gbkey=CDS;gene=exbB;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247988.1;locus_tag=JYJ20_RS05415;product=TonB-system energizer ExbB;protein_id=WP_006247988.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 42421 42747 . + . ID=gene-JYJ20_RS05420;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=JYJ20_RS05420 NZ_JAFIRP010000011.1 Protein Homology CDS 42421 42747 . + 0 ID=cds-WP_006247987.1;Parent=gene-JYJ20_RS05420;Dbxref=GenBank:WP_006247987.1;Name=WP_006247987.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595720.1;locus_tag=JYJ20_RS05420;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_006247987.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 42791 43636 . + . ID=gene-JYJ20_RS05425;Name=JYJ20_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05425 NZ_JAFIRP010000011.1 Protein Homology CDS 42791 43636 . + 0 ID=cds-WP_006247986.1;Parent=gene-JYJ20_RS05425;Dbxref=GenBank:WP_006247986.1;Name=WP_006247986.1;Ontology_term=GO:0006457,GO:0034599,GO:0005515,GO:0051082;gbkey=CDS;go_function=protein binding|0005515||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,cellular response to oxidative stress|0034599||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651283.1;locus_tag=JYJ20_RS05425;product=co-chaperone YbbN;protein_id=WP_006247986.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 43676 44083 . - . ID=gene-JYJ20_RS05430;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=JYJ20_RS05430 NZ_JAFIRP010000011.1 Protein Homology CDS 43676 44083 . - 0 ID=cds-WP_006252179.1;Parent=gene-JYJ20_RS05430;Dbxref=GenBank:WP_006252179.1;Name=WP_006252179.1;Ontology_term=GO:0047324;gbkey=CDS;gene=dhaM;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252179.1;locus_tag=JYJ20_RS05430;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_006252179.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 44093 44719 . - . ID=gene-JYJ20_RS05435;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=JYJ20_RS05435 NZ_JAFIRP010000011.1 Protein Homology CDS 44093 44719 . - 0 ID=cds-WP_209026066.1;Parent=gene-JYJ20_RS05435;Dbxref=GenBank:WP_209026066.1;Name=WP_209026066.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651281.1;locus_tag=JYJ20_RS05435;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_209026066.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 44740 45810 . - . ID=gene-JYJ20_RS05440;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=JYJ20_RS05440 NZ_JAFIRP010000011.1 Protein Homology CDS 44740 45810 . - 0 ID=cds-WP_006247984.1;Parent=gene-JYJ20_RS05440;Dbxref=GenBank:WP_006247984.1;Name=WP_006247984.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012073177.1;locus_tag=JYJ20_RS05440;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_006247984.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 45977 46930 . + . ID=gene-JYJ20_RS05445;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=JYJ20_RS05445 NZ_JAFIRP010000011.1 Protein Homology CDS 45977 46930 . + 0 ID=cds-WP_006247983.1;Parent=gene-JYJ20_RS05445;Dbxref=GenBank:WP_006247983.1;Name=WP_006247983.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595726.1;locus_tag=JYJ20_RS05445;product=thioredoxin-disulfide reductase;protein_id=WP_006247983.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 46940 47695 . + . ID=gene-JYJ20_RS05450;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=JYJ20_RS05450 NZ_JAFIRP010000011.1 Protein Homology CDS 46940 47695 . + 0 ID=cds-WP_006247982.1;Parent=gene-JYJ20_RS05450;Dbxref=GenBank:WP_006247982.1;Name=WP_006247982.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247982.1;locus_tag=JYJ20_RS05450;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_006247982.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 47761 48192 . + . ID=gene-JYJ20_RS05455;Name=JYJ20_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05455 NZ_JAFIRP010000011.1 Protein Homology CDS 47761 48192 . + 0 ID=cds-WP_472778943.1;Parent=gene-JYJ20_RS05455;Dbxref=GenBank:WP_472778943.1;Name=WP_472778943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007526626.1;locus_tag=JYJ20_RS05455;product=YidB family protein;protein_id=WP_472778943.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 48247 49233 . - . ID=gene-JYJ20_RS05460;Name=JYJ20_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05460 NZ_JAFIRP010000011.1 Protein Homology CDS 48247 49233 . - 0 ID=cds-WP_006247980.1;Parent=gene-JYJ20_RS05460;Dbxref=GenBank:WP_006247980.1;Name=WP_006247980.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651611.1;locus_tag=JYJ20_RS05460;product=amidohydrolase family protein;protein_id=WP_006247980.1;transl_table=11 NZ_JAFIRP010000011.1 cmsearch riboswitch 49517 49660 . + . ID=id-NZ_JAFIRP010000011.1:49517..49660;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAFIRP010000011.1 RefSeq gene 49704 50657 . + . ID=gene-JYJ20_RS05465;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=JYJ20_RS05465 NZ_JAFIRP010000011.1 Protein Homology CDS 49704 50657 . + 0 ID=cds-WP_006252181.1;Parent=gene-JYJ20_RS05465;Dbxref=GenBank:WP_006252181.1;Name=WP_006252181.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252181.1;locus_tag=JYJ20_RS05465;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_006252181.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 50907 51353 . + . ID=gene-JYJ20_RS05470;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=JYJ20_RS05470 NZ_JAFIRP010000011.1 Protein Homology CDS 50907 51353 . + 0 ID=cds-WP_006253736.1;Parent=gene-JYJ20_RS05470;Dbxref=GenBank:WP_006253736.1;Name=WP_006253736.1;Ontology_term=GO:0006355,GO:0008270,GO:0019899;gbkey=CDS;gene=dksA;go_function=zinc ion binding|0008270||IEA,enzyme binding|0019899||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595916.1;locus_tag=JYJ20_RS05470;product=RNA polymerase-binding protein DksA;protein_id=WP_006253736.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 51406 52929 . + . ID=gene-JYJ20_RS05475;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=JYJ20_RS05475 NZ_JAFIRP010000011.1 Protein Homology CDS 51406 52929 . + 0 ID=cds-WP_289332337.1;Parent=gene-JYJ20_RS05475;Dbxref=GenBank:WP_289332337.1;Name=WP_289332337.1;Ontology_term=GO:0043633,GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;go_process=polyadenylation-dependent RNA catabolic process|0043633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016534534.1;locus_tag=JYJ20_RS05475;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_289332337.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 53132 53605 . + . ID=gene-JYJ20_RS05480;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=JYJ20_RS05480 NZ_JAFIRP010000011.1 Protein Homology CDS 53132 53605 . + 0 ID=cds-WP_209026067.1;Parent=gene-JYJ20_RS05480;Dbxref=GenBank:WP_209026067.1;Name=WP_209026067.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252185.1;locus_tag=JYJ20_RS05480;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_209026067.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 53602 53796 . - . ID=gene-JYJ20_RS05485;Name=JYJ20_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05485 NZ_JAFIRP010000011.1 Protein Homology CDS 53602 53796 . - 0 ID=cds-WP_006247973.1;Parent=gene-JYJ20_RS05485;Dbxref=GenBank:WP_006247973.1;Name=WP_006247973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247973.1;locus_tag=JYJ20_RS05485;product=YnbE family lipoprotein;protein_id=WP_006247973.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 53814 56282 . - . ID=gene-JYJ20_RS05490;Name=JYJ20_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05490 NZ_JAFIRP010000011.1 Protein Homology CDS 53814 56282 . - 0 ID=cds-WP_241768563.1;Parent=gene-JYJ20_RS05490;Dbxref=GenBank:WP_241768563.1;Name=WP_241768563.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023167.7;locus_tag=JYJ20_RS05490;product=intermembrane phospholipid transport protein YdbH family protein;protein_id=WP_241768563.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 56254 56523 . - . ID=gene-JYJ20_RS05495;Name=JYJ20_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05495 NZ_JAFIRP010000011.1 Protein Homology CDS 56254 56523 . - 0 ID=cds-WP_006252999.1;Parent=gene-JYJ20_RS05495;Dbxref=GenBank:WP_006252999.1;Name=WP_006252999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252187.1;locus_tag=JYJ20_RS05495;product=hypothetical protein;protein_id=WP_006252999.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 56527 57342 . - . ID=gene-JYJ20_RS05500;Name=JYJ20_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05500 NZ_JAFIRP010000011.1 Protein Homology CDS 56527 57342 . - 0 ID=cds-WP_006252188.1;Parent=gene-JYJ20_RS05500;Dbxref=GenBank:WP_006252188.1;Name=WP_006252188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247972.1;locus_tag=JYJ20_RS05500;product=hypothetical protein;protein_id=WP_006252188.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 57432 57839 . + . ID=gene-JYJ20_RS05505;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=JYJ20_RS05505 NZ_JAFIRP010000011.1 Protein Homology CDS 57432 57839 . + 0 ID=cds-WP_006247971.1;Parent=gene-JYJ20_RS05505;Dbxref=GenBank:WP_006247971.1;Name=WP_006247971.1;Ontology_term=GO:0051596,GO:0004462,GO:0046872;gbkey=CDS;gene=gloA;go_function=lactoylglutathione lyase activity|0004462||IEA,metal ion binding|0046872||IEA;go_process=methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875026.1;locus_tag=JYJ20_RS05505;product=lactoylglutathione lyase;protein_id=WP_006247971.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 57924 58571 . + . ID=gene-JYJ20_RS05510;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=JYJ20_RS05510 NZ_JAFIRP010000011.1 Protein Homology CDS 57924 58571 . + 0 ID=cds-WP_006247970.1;Parent=gene-JYJ20_RS05510;Dbxref=GenBank:WP_006247970.1;Name=WP_006247970.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247970.1;locus_tag=JYJ20_RS05510;product=ribonuclease T;protein_id=WP_006247970.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 58992 60743 . + . ID=gene-JYJ20_RS05515;Name=JYJ20_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05515 NZ_JAFIRP010000011.1 Protein Homology CDS 58992 60743 . + 0 ID=cds-WP_209026068.1;Parent=gene-JYJ20_RS05515;Dbxref=GenBank:WP_209026068.1;Name=WP_209026068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484747.1;locus_tag=JYJ20_RS05515;product=transferrin-binding protein-like solute binding protein;protein_id=WP_209026068.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 60831 63623 . + . ID=gene-JYJ20_RS05520;Name=JYJ20_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05520 NZ_JAFIRP010000011.1 Protein Homology CDS 60831 63623 . + 0 ID=cds-WP_245155386.1;Parent=gene-JYJ20_RS05520;Dbxref=GenBank:WP_245155386.1;Name=WP_245155386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015587124.1;locus_tag=JYJ20_RS05520;product=lactoferrin/transferrin family TonB-dependent receptor;protein_id=WP_245155386.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 63728 64024 . - . ID=gene-JYJ20_RS05525;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=JYJ20_RS05525 NZ_JAFIRP010000011.1 Protein Homology CDS 63728 64024 . - 0 ID=cds-WP_006247967.1;Parent=gene-JYJ20_RS05525;Dbxref=GenBank:WP_006247967.1;Name=WP_006247967.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011199710.1;locus_tag=JYJ20_RS05525;product=DNA-binding transcriptional regulator Fis;protein_id=WP_006247967.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 64029 65018 . - . ID=gene-JYJ20_RS05530;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=JYJ20_RS05530 NZ_JAFIRP010000011.1 Protein Homology CDS 64029 65018 . - 0 ID=cds-WP_006247966.1;Parent=gene-JYJ20_RS05530;Dbxref=GenBank:WP_006247966.1;Name=WP_006247966.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247966.1;locus_tag=JYJ20_RS05530;product=tRNA dihydrouridine synthase DusB;protein_id=WP_006247966.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 65242 65730 . - . ID=gene-JYJ20_RS05535;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=JYJ20_RS05535 NZ_JAFIRP010000011.1 Protein Homology CDS 65242 65730 . - 0 ID=cds-WP_006247965.1;Parent=gene-JYJ20_RS05535;Dbxref=GenBank:WP_006247965.1;Name=WP_006247965.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247965.1;locus_tag=JYJ20_RS05535;product=phosphohistidine phosphatase SixA;protein_id=WP_006247965.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 65857 67296 . + . ID=gene-JYJ20_RS05540;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=JYJ20_RS05540 NZ_JAFIRP010000011.1 Protein Homology CDS 65857 67296 . + 0 ID=cds-WP_006247964.1;Parent=gene-JYJ20_RS05540;Dbxref=GenBank:WP_006247964.1;Name=WP_006247964.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005818583.1;locus_tag=JYJ20_RS05540;product=pyruvate kinase;protein_id=WP_006247964.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 67392 68429 . + . ID=gene-JYJ20_RS05545;Name=JYJ20_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05545 NZ_JAFIRP010000011.1 Protein Homology CDS 67392 68429 . + 0 ID=cds-WP_006247963.1;Parent=gene-JYJ20_RS05545;Dbxref=GenBank:WP_006247963.1;Name=WP_006247963.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252194.1;locus_tag=JYJ20_RS05545;product=glycosyltransferase family 9 protein;protein_id=WP_006247963.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 68469 69527 . + . ID=gene-JYJ20_RS05550;Name=JYJ20_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05550 NZ_JAFIRP010000011.1 Protein Homology CDS 68469 69527 . + 0 ID=cds-WP_006247962.1;Parent=gene-JYJ20_RS05550;Dbxref=GenBank:WP_006247962.1;Name=WP_006247962.1;Ontology_term=GO:0009073,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252195.1;locus_tag=JYJ20_RS05550;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_006247962.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 69582 70703 . + . ID=gene-JYJ20_RS05555;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=JYJ20_RS05555 NZ_JAFIRP010000011.1 Protein Homology CDS 69582 70703 . + 0 ID=cds-WP_006247961.1;Parent=gene-JYJ20_RS05555;Dbxref=GenBank:WP_006247961.1;Name=WP_006247961.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=L-tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875025.1;locus_tag=JYJ20_RS05555;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_006247961.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 70894 71979 . - . ID=gene-JYJ20_RS05560;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=JYJ20_RS05560 NZ_JAFIRP010000011.1 Protein Homology CDS 70894 71979 . - 0 ID=cds-WP_006247959.1;Parent=gene-JYJ20_RS05560;Dbxref=GenBank:WP_006247959.1;Name=WP_006247959.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247959.1;locus_tag=JYJ20_RS05560;product=DNA replication/repair protein RecF;protein_id=WP_006247959.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 72119 72448 . + . ID=gene-JYJ20_RS05565;Name=JYJ20_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05565 NZ_JAFIRP010000011.1 Protein Homology CDS 72119 72448 . + 0 ID=cds-WP_005600053.1;Parent=gene-JYJ20_RS05565;Dbxref=GenBank:WP_005600053.1;Name=WP_005600053.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=JYJ20_RS05565;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_005600053.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 72456 73061 . + . ID=gene-JYJ20_RS05570;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=JYJ20_RS05570 NZ_JAFIRP010000011.1 Protein Homology CDS 72456 73061 . + 0 ID=cds-WP_006252197.1;Parent=gene-JYJ20_RS05570;Dbxref=GenBank:WP_006252197.1;Name=WP_006252197.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015939588.1;locus_tag=JYJ20_RS05570;product=recombination mediator RecR;protein_id=WP_006252197.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 73133 73459 . + . ID=gene-JYJ20_RS05575;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=JYJ20_RS05575 NZ_JAFIRP010000011.1 Protein Homology CDS 73133 73459 . + 0 ID=cds-WP_006247956.1;Parent=gene-JYJ20_RS05575;Dbxref=GenBank:WP_006247956.1;Name=WP_006247956.1;Ontology_term=GO:0009055;gbkey=CDS;gene=grxD;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005705415.1;locus_tag=JYJ20_RS05575;product=Grx4 family monothiol glutaredoxin;protein_id=WP_006247956.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 73601 74638 . + . ID=gene-JYJ20_RS05580;Name=JYJ20_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05580 NZ_JAFIRP010000011.1 Protein Homology CDS 73601 74638 . + 0 ID=cds-WP_006247955.1;Parent=gene-JYJ20_RS05580;Dbxref=GenBank:WP_006247955.1;Name=WP_006247955.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid:2-oxoglutarate transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247955.1;locus_tag=JYJ20_RS05580;product=branched-chain amino acid aminotransferase;protein_id=WP_006247955.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 74665 75213 . + . ID=gene-JYJ20_RS05585;Name=JYJ20_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05585 NZ_JAFIRP010000011.1 Protein Homology CDS 74665 75213 . + 0 ID=cds-WP_006252198.1;Parent=gene-JYJ20_RS05585;Dbxref=GenBank:WP_006252198.1;Name=WP_006252198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252198.1;locus_tag=JYJ20_RS05585;product=membrane lipoprotein lipid attachment site-containing protein;protein_id=WP_006252198.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 75222 75566 . + . ID=gene-JYJ20_RS05590;Name=JYJ20_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05590 NZ_JAFIRP010000011.1 Protein Homology CDS 75222 75566 . + 0 ID=cds-WP_006247953.1;Parent=gene-JYJ20_RS05590;Dbxref=GenBank:WP_006247953.1;Name=WP_006247953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600044.1;locus_tag=JYJ20_RS05590;product=RidA family protein;protein_id=WP_006247953.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 75599 77377 . - . ID=gene-JYJ20_RS05595;Name=JYJ20_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05595 NZ_JAFIRP010000011.1 Protein Homology CDS 75599 77377 . - 0 ID=cds-WP_006247952.1;Parent=gene-JYJ20_RS05595;Dbxref=GenBank:WP_006247952.1;Name=WP_006247952.1;Ontology_term=GO:0005524,GO:0015645;gbkey=CDS;go_function=ATP binding|0005524||IEA,fatty acid ligase activity|0015645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253008.1;locus_tag=JYJ20_RS05595;product=AMP-dependent synthetase/ligase;protein_id=WP_006247952.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 77603 78172 . - . ID=gene-JYJ20_RS05600;Name=JYJ20_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05600 NZ_JAFIRP010000011.1 Protein Homology CDS 77603 78172 . - 0 ID=cds-WP_006247950.1;Parent=gene-JYJ20_RS05600;Dbxref=GenBank:WP_006247950.1;Name=WP_006247950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005821628.1;locus_tag=JYJ20_RS05600;product=elongation factor P hydroxylase;protein_id=WP_006247950.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 78182 79945 . - . ID=gene-JYJ20_RS05605;Name=JYJ20_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05605 NZ_JAFIRP010000011.1 Protein Homology CDS 78182 79945 . - 0 ID=cds-WP_006247949.1;Parent=gene-JYJ20_RS05605;Dbxref=GenBank:WP_006247949.1;Name=WP_006247949.1;Ontology_term=GO:0017004,GO:0009055,GO:0030554,GO:0047134;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,adenyl nucleotide binding|0030554||IEA,protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601957.1;locus_tag=JYJ20_RS05605;product=protein-disulfide reductase DsbD;protein_id=WP_006247949.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 80153 80887 . + . ID=gene-JYJ20_RS05610;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=JYJ20_RS05610 NZ_JAFIRP010000011.1 Protein Homology CDS 80153 80887 . + 0 ID=cds-WP_006247948.1;Parent=gene-JYJ20_RS05610;Dbxref=GenBank:WP_006247948.1;Name=WP_006247948.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007523332.1;locus_tag=JYJ20_RS05610;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_006247948.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 80913 81638 . + . ID=gene-JYJ20_RS05615;Name=JYJ20_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05615 NZ_JAFIRP010000011.1 Protein Homology CDS 80913 81638 . + 0 ID=cds-WP_006247947.1;Parent=gene-JYJ20_RS05615;Dbxref=GenBank:WP_006247947.1;Name=WP_006247947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247947.1;locus_tag=JYJ20_RS05615;product=transporter substrate-binding domain-containing protein;protein_id=WP_006247947.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 81638 82309 . + . ID=gene-JYJ20_RS05620;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=JYJ20_RS05620 NZ_JAFIRP010000011.1 Protein Homology CDS 81638 82309 . + 0 ID=cds-WP_006247946.1;Parent=gene-JYJ20_RS05620;Dbxref=GenBank:WP_006247946.1;Name=WP_006247946.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247946.1;locus_tag=JYJ20_RS05620;product=arginine ABC transporter permease ArtQ;protein_id=WP_006247946.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 82309 82992 . + . ID=gene-JYJ20_RS05625;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=JYJ20_RS05625 NZ_JAFIRP010000011.1 Protein Homology CDS 82309 82992 . + 0 ID=cds-WP_006247945.1;Parent=gene-JYJ20_RS05625;Dbxref=GenBank:WP_006247945.1;Name=WP_006247945.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247945.1;locus_tag=JYJ20_RS05625;product=arginine ABC transporter permease ArtM;protein_id=WP_006247945.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 83091 84095 . - . ID=gene-JYJ20_RS05630;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=JYJ20_RS05630 NZ_JAFIRP010000011.1 Protein Homology CDS 83091 84095 . - 0 ID=cds-WP_006247944.1;Parent=gene-JYJ20_RS05630;Dbxref=GenBank:WP_006247944.1;Name=WP_006247944.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652076.1;locus_tag=JYJ20_RS05630;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_006247944.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 84232 84837 . - . ID=gene-JYJ20_RS05635;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=JYJ20_RS05635 NZ_JAFIRP010000011.1 Protein Homology CDS 84232 84837 . - 0 ID=cds-WP_006247943.1;Parent=gene-JYJ20_RS05635;Dbxref=GenBank:WP_006247943.1;Name=WP_006247943.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005686751.1;locus_tag=JYJ20_RS05635;product=Holliday junction branch migration protein RuvA;protein_id=WP_006247943.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 84949 85572 . - . ID=gene-JYJ20_RS05640;Name=JYJ20_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05640 NZ_JAFIRP010000011.1 Protein Homology CDS 84949 85572 . - 0 ID=cds-WP_006247941.1;Parent=gene-JYJ20_RS05640;Dbxref=GenBank:WP_006247941.1;Name=WP_006247941.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247941.1;locus_tag=JYJ20_RS05640;product=LysE family transporter;protein_id=WP_006247941.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 85579 86052 . - . ID=gene-JYJ20_RS05645;Name=JYJ20_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05645 NZ_JAFIRP010000011.1 Protein Homology CDS 85579 86052 . - 0 ID=cds-WP_006247940.1;Parent=gene-JYJ20_RS05645;Dbxref=GenBank:WP_006247940.1;Name=WP_006247940.1;Ontology_term=GO:0006644,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=phospholipid metabolic process|0006644||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595983.1;locus_tag=JYJ20_RS05645;product=phosphatidylglycerophosphatase A family protein;protein_id=WP_006247940.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 86057 87037 . - . ID=gene-JYJ20_RS05650;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=JYJ20_RS05650 NZ_JAFIRP010000011.1 Protein Homology CDS 86057 87037 . - 0 ID=cds-WP_006247939.1;Parent=gene-JYJ20_RS05650;Dbxref=GenBank:WP_006247939.1;Name=WP_006247939.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247939.1;locus_tag=JYJ20_RS05650;product=thiamine-phosphate kinase;protein_id=WP_006247939.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 87100 87513 . - . ID=gene-JYJ20_RS05655;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=JYJ20_RS05655 NZ_JAFIRP010000011.1 Protein Homology CDS 87100 87513 . - 0 ID=cds-WP_006247938.1;Parent=gene-JYJ20_RS05655;Dbxref=GenBank:WP_006247938.1;Name=WP_006247938.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652638.1;locus_tag=JYJ20_RS05655;product=transcription antitermination factor NusB;protein_id=WP_006247938.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 87594 88907 . - . ID=gene-JYJ20_RS05660;Name=pilQ;gbkey=Gene;gene=pilQ;gene_biotype=protein_coding;locus_tag=JYJ20_RS05660 NZ_JAFIRP010000011.1 Protein Homology CDS 87594 88907 . - 0 ID=cds-WP_006247937.1;Parent=gene-JYJ20_RS05660;Dbxref=GenBank:WP_006247937.1;Name=WP_006247937.1;Ontology_term=GO:0009297,GO:0009306;gbkey=CDS;gene=pilQ;go_process=pilus assembly|0009297||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252205.1;locus_tag=JYJ20_RS05660;product=type IV pilus secretin PilQ;protein_id=WP_006247937.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 88916 89329 . - . ID=gene-JYJ20_RS05665;Name=JYJ20_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05665 NZ_JAFIRP010000011.1 Protein Homology CDS 88916 89329 . - 0 ID=cds-WP_006247936.1;Parent=gene-JYJ20_RS05665;Dbxref=GenBank:WP_006247936.1;Name=WP_006247936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247936.1;locus_tag=JYJ20_RS05665;product=hypothetical protein;protein_id=WP_006247936.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 89332 89868 . - . ID=gene-JYJ20_RS05670;Name=JYJ20_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05670 NZ_JAFIRP010000011.1 Protein Homology CDS 89332 89868 . - 0 ID=cds-WP_006247935.1;Parent=gene-JYJ20_RS05670;Dbxref=GenBank:WP_006247935.1;Name=WP_006247935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247935.1;locus_tag=JYJ20_RS05670;product=hypothetical protein;protein_id=WP_006247935.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 89870 90391 . - . ID=gene-JYJ20_RS05675;Name=JYJ20_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05675 NZ_JAFIRP010000011.1 Protein Homology CDS 89870 90391 . - 0 ID=cds-WP_209026069.1;Parent=gene-JYJ20_RS05675;Dbxref=GenBank:WP_209026069.1;Name=WP_209026069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247934.1;locus_tag=JYJ20_RS05675;product=hypothetical protein;protein_id=WP_209026069.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 90367 91065 . - . ID=gene-JYJ20_RS05680;Name=JYJ20_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05680 NZ_JAFIRP010000011.1 Protein Homology CDS 90367 91065 . - 0 ID=cds-WP_006247933.1;Parent=gene-JYJ20_RS05680;Dbxref=GenBank:WP_006247933.1;Name=WP_006247933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247933.1;locus_tag=JYJ20_RS05680;product=hypothetical protein;protein_id=WP_006247933.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 91189 93753 . + . ID=gene-JYJ20_RS05685;Name=JYJ20_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05685 NZ_JAFIRP010000011.1 Protein Homology CDS 91189 93753 . + 0 ID=cds-WP_006247932.1;Parent=gene-JYJ20_RS05685;Dbxref=GenBank:WP_006247932.1;Name=WP_006247932.1;Ontology_term=GO:0006508,GO:0009252,GO:0008658,GO:0008955,GO:0009002;gbkey=CDS;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614417.1;locus_tag=JYJ20_RS05685;product=penicillin-binding protein 1A;protein_id=WP_006247932.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 93990 94511 . + . ID=gene-JYJ20_RS05690;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=JYJ20_RS05690 NZ_JAFIRP010000011.1 Protein Homology CDS 93990 94511 . + 0 ID=cds-WP_006247930.1;Parent=gene-JYJ20_RS05690;Dbxref=GenBank:WP_006247930.1;Name=WP_006247930.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005710312.1;locus_tag=JYJ20_RS05690;product=shikimate kinase AroK;protein_id=WP_006247930.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 94535 95623 . + . ID=gene-JYJ20_RS05695;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=JYJ20_RS05695 NZ_JAFIRP010000011.1 Protein Homology CDS 94535 95623 . + 0 ID=cds-WP_006247929.1;Parent=gene-JYJ20_RS05695;Dbxref=GenBank:WP_006247929.1;Name=WP_006247929.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652630.1;locus_tag=JYJ20_RS05695;product=3-dehydroquinate synthase;protein_id=WP_006247929.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 95637 96464 . + . ID=gene-JYJ20_RS05700;Name=JYJ20_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05700 NZ_JAFIRP010000011.1 Protein Homology CDS 95637 96464 . + 0 ID=cds-WP_006247928.1;Parent=gene-JYJ20_RS05700;Dbxref=GenBank:WP_006247928.1;Name=WP_006247928.1;Ontology_term=GO:0009307,GO:0009007;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252207.1;locus_tag=JYJ20_RS05700;product=Dam family site-specific DNA-(adenine-N6)-methyltransferase;protein_id=WP_006247928.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 96534 97892 . + . ID=gene-JYJ20_RS05705;Name=JYJ20_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05705 NZ_JAFIRP010000011.1 Protein Homology CDS 96534 97892 . + 0 ID=cds-WP_006247927.1;Parent=gene-JYJ20_RS05705;Dbxref=GenBank:WP_006247927.1;Name=WP_006247927.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603424.1;locus_tag=JYJ20_RS05705;product=sodium-dependent transporter;protein_id=WP_006247927.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 98147 99322 . + . ID=gene-JYJ20_RS05710;Name=JYJ20_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05710 NZ_JAFIRP010000011.1 Protein Homology CDS 98147 99322 . + 0 ID=cds-WP_006247926.1;Parent=gene-JYJ20_RS05710;Dbxref=GenBank:WP_006247926.1;Name=WP_006247926.1;Ontology_term=GO:0006094,GO:0006096,GO:0000166,GO:0004618;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,phosphoglycerate kinase activity|0004618||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012072290.1;locus_tag=JYJ20_RS05710;product=phosphoglycerate kinase;protein_id=WP_006247926.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 99419 100495 . + . ID=gene-JYJ20_RS05715;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=JYJ20_RS05715 NZ_JAFIRP010000011.1 Protein Homology CDS 99419 100495 . + 0 ID=cds-WP_006247925.1;Parent=gene-JYJ20_RS05715;Dbxref=GenBank:WP_006247925.1;Name=WP_006247925.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014990940.1;locus_tag=JYJ20_RS05715;product=class II fructose-bisphosphate aldolase;protein_id=WP_006247925.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 100596 101390 . + . ID=gene-JYJ20_RS05720;Name=JYJ20_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05720 NZ_JAFIRP010000011.1 Protein Homology CDS 100596 101390 . + 0 ID=cds-WP_006247924.1;Parent=gene-JYJ20_RS05720;Dbxref=GenBank:WP_006247924.1;Name=WP_006247924.1;Ontology_term=GO:0015833,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247924.1;locus_tag=JYJ20_RS05720;product=peptide ABC transporter ATP-binding protein;protein_id=WP_006247924.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 101532 102170 . + . ID=gene-JYJ20_RS05725;Name=JYJ20_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05725 NZ_JAFIRP010000011.1 Protein Homology CDS 101532 102170 . + 0 ID=cds-WP_006247923.1;Parent=gene-JYJ20_RS05725;Dbxref=GenBank:WP_006247923.1;Name=WP_006247923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252211.1;locus_tag=JYJ20_RS05725;product=nitroreductase family protein;protein_id=WP_006247923.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 102265 102789 . + . ID=gene-JYJ20_RS05730;Name=JYJ20_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05730 NZ_JAFIRP010000011.1 Protein Homology CDS 102265 102789 . + 0 ID=cds-WP_006247922.1;Parent=gene-JYJ20_RS05730;Dbxref=GenBank:WP_006247922.1;Name=WP_006247922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247922.1;locus_tag=JYJ20_RS05730;product=TIGR00645 family protein;protein_id=WP_006247922.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 102866 104236 . + . ID=gene-JYJ20_RS05735;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=JYJ20_RS05735 NZ_JAFIRP010000011.1 Protein Homology CDS 102866 104236 . + 0 ID=cds-WP_006252212.1;Parent=gene-JYJ20_RS05735;Dbxref=GenBank:WP_006252212.1;Name=WP_006252212.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009499791.1;locus_tag=JYJ20_RS05735;product=glutathione-disulfide reductase;protein_id=WP_006252212.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 104247 104633 . + . ID=gene-JYJ20_RS05740;Name=JYJ20_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05740 NZ_JAFIRP010000011.1 Protein Homology CDS 104247 104633 . + 0 ID=cds-WP_006247920.1;Parent=gene-JYJ20_RS05740;Dbxref=GenBank:WP_006247920.1;Name=WP_006247920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247920.1;locus_tag=JYJ20_RS05740;product=hypothetical protein;protein_id=WP_006247920.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 104703 105620 . - . ID=gene-JYJ20_RS05745;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=JYJ20_RS05745 NZ_JAFIRP010000011.1 Protein Homology CDS 104703 105620 . - 0 ID=cds-WP_006247919.1;Parent=gene-JYJ20_RS05745;Dbxref=GenBank:WP_006247919.1;Name=WP_006247919.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622482.1;locus_tag=JYJ20_RS05745;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_006247919.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 105676 106353 . - . ID=gene-JYJ20_RS05750;Name=JYJ20_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05750 NZ_JAFIRP010000011.1 Protein Homology CDS 105676 106353 . - 0 ID=cds-WP_006247918.1;Parent=gene-JYJ20_RS05750;Dbxref=GenBank:WP_006247918.1;Name=WP_006247918.1;Ontology_term=GO:0009061,GO:0008863,GO:0009055,GO:0009326;gbkey=CDS;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247918.1;locus_tag=JYJ20_RS05750;product=formate dehydrogenase subunit gamma;protein_id=WP_006247918.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 106346 107260 . - . ID=gene-JYJ20_RS05755;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=JYJ20_RS05755 NZ_JAFIRP010000011.1 Protein Homology CDS 106346 107260 . - 0 ID=cds-WP_006247917.1;Parent=gene-JYJ20_RS05755;Dbxref=GenBank:WP_006247917.1;Name=WP_006247917.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252214.1;locus_tag=JYJ20_RS05755;product=formate dehydrogenase subunit beta;protein_id=WP_006247917.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 107263 110334 . - . ID=gene-JYJ20_RS05760;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=JYJ20_RS05760 NZ_JAFIRP010000011.1 Protein Homology CDS 107263 110334 . - 0 ID=cds-WP_209026070.1;Parent=gene-JYJ20_RS05760;Dbxref=GenBank:WP_209026070.1;Name=WP_209026070.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015587122.1;locus_tag=JYJ20_RS05760;product=formate dehydrogenase-N subunit alpha;protein_id=WP_209026070.1;transl_except=(pos:complement(109747..109749)%2Caa:Sec);transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 110570 111382 . + . ID=gene-JYJ20_RS05765;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=JYJ20_RS05765 NZ_JAFIRP010000011.1 Protein Homology CDS 110570 111382 . + 0 ID=cds-WP_006247915.1;Parent=gene-JYJ20_RS05765;Dbxref=GenBank:WP_006247915.1;Name=WP_006247915.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247915.1;locus_tag=JYJ20_RS05765;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_006247915.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 111385 112314 . + . ID=gene-JYJ20_RS05770;Name=JYJ20_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05770 NZ_JAFIRP010000011.1 Protein Homology CDS 111385 112314 . + 0 ID=cds-WP_006247914.1;Parent=gene-JYJ20_RS05770;Dbxref=GenBank:WP_006247914.1;Name=WP_006247914.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601223.1;locus_tag=JYJ20_RS05770;product=AEC family transporter;protein_id=WP_006247914.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 112406 112915 . - . ID=gene-JYJ20_RS05775;Name=JYJ20_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05775 NZ_JAFIRP010000011.1 Protein Homology CDS 112406 112915 . - 0 ID=cds-WP_006247913.1;Parent=gene-JYJ20_RS05775;Dbxref=GenBank:WP_006247913.1;Name=WP_006247913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651768.1;locus_tag=JYJ20_RS05775;product=peptidylprolyl isomerase;protein_id=WP_006247913.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 113071 114447 . + . ID=gene-JYJ20_RS05780;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=JYJ20_RS05780 NZ_JAFIRP010000011.1 Protein Homology CDS 113071 114447 . + 0 ID=cds-WP_006247911.1;Parent=gene-JYJ20_RS05780;Dbxref=GenBank:WP_006247911.1;Name=WP_006247911.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597564.1;locus_tag=JYJ20_RS05780;product=cysteine--tRNA ligase;protein_id=WP_006247911.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 114562 115509 . - . ID=gene-JYJ20_RS05785;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=JYJ20_RS05785 NZ_JAFIRP010000011.1 Protein Homology CDS 114562 115509 . - 0 ID=cds-WP_006247910.1;Parent=gene-JYJ20_RS05785;Dbxref=GenBank:WP_006247910.1;Name=WP_006247910.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247910.1;locus_tag=JYJ20_RS05785;product=homoserine kinase;protein_id=WP_006247910.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 115509 117965 . - . ID=gene-JYJ20_RS05790;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=JYJ20_RS05790 NZ_JAFIRP010000011.1 Protein Homology CDS 115509 117965 . - 0 ID=cds-WP_006247909.1;Parent=gene-JYJ20_RS05790;Dbxref=GenBank:WP_006247909.1;Name=WP_006247909.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603497.1;locus_tag=JYJ20_RS05790;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_006247909.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 118409 119050 . + . ID=gene-JYJ20_RS05795;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=JYJ20_RS05795 NZ_JAFIRP010000011.1 Protein Homology CDS 118409 119050 . + 0 ID=cds-WP_006247907.1;Parent=gene-JYJ20_RS05795;Dbxref=GenBank:WP_006247907.1;Name=WP_006247907.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005708524.1;locus_tag=JYJ20_RS05795;product=superoxide dismutase [Mn];protein_id=WP_006247907.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 119113 120237 . - . ID=gene-JYJ20_RS05800;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=JYJ20_RS05800 NZ_JAFIRP010000011.1 Protein Homology CDS 119113 120237 . - 0 ID=cds-WP_006247906.1;Parent=gene-JYJ20_RS05800;Dbxref=GenBank:WP_006247906.1;Name=WP_006247906.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848339.1;locus_tag=JYJ20_RS05800;product=alanine racemase;protein_id=WP_006247906.1;transl_table=11 NZ_JAFIRP010000011.1 RefSeq gene 120367 122328 . + . ID=gene-JYJ20_RS05805;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=JYJ20_RS05805 NZ_JAFIRP010000011.1 Protein Homology CDS 120367 122328 . + 0 ID=cds-WP_006247905.1;Parent=gene-JYJ20_RS05805;Dbxref=GenBank:WP_006247905.1;Name=WP_006247905.1;Ontology_term=GO:0006281,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247905.1;locus_tag=JYJ20_RS05805;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_006247905.1;transl_table=11 ##sequence-region NZ_JAFIRP010000012.1 1 16329 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000012.1 RefSeq region 1 16329 . + . ID=NZ_JAFIRP010000012.1:1..16329;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000012.1 RefSeq gene 1 471 . - . ID=gene-JYJ20_RS05810;Name=JYJ20_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05810;partial=true;start_range=.,1 NZ_JAFIRP010000012.1 Protein Homology CDS 1 471 . - 0 ID=cds-WP_006253340.1;Parent=gene-JYJ20_RS05810;Dbxref=GenBank:WP_006253340.1;Name=WP_006253340.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011199348.1;locus_tag=JYJ20_RS05810;partial=true;product=GTP-binding protein;protein_id=WP_006253340.1;start_range=.,1;transl_table=11 NZ_JAFIRP010000012.1 RefSeq gene 531 2633 . - . ID=gene-JYJ20_RS05815;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=JYJ20_RS05815 NZ_JAFIRP010000012.1 Protein Homology CDS 531 2633 . - 0 ID=cds-WP_209026072.1;Parent=gene-JYJ20_RS05815;Dbxref=GenBank:WP_209026072.1;Name=WP_209026072.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005565478.1;locus_tag=JYJ20_RS05815;product=elongation factor G;protein_id=WP_209026072.1;transl_table=11 NZ_JAFIRP010000012.1 RefSeq gene 2735 3205 . - . ID=gene-JYJ20_RS05820;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=JYJ20_RS05820 NZ_JAFIRP010000012.1 Protein Homology CDS 2735 3205 . - 0 ID=cds-WP_006249834.1;Parent=gene-JYJ20_RS05820;Dbxref=GenBank:WP_006249834.1;Name=WP_006249834.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=JYJ20_RS05820;product=30S ribosomal protein S7;protein_id=WP_006249834.1;transl_table=11 NZ_JAFIRP010000012.1 RefSeq gene 3336 3710 . - . ID=gene-JYJ20_RS05825;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=JYJ20_RS05825 NZ_JAFIRP010000012.1 Protein Homology CDS 3336 3710 . - 0 ID=cds-WP_005543325.1;Parent=gene-JYJ20_RS05825;Dbxref=GenBank:WP_005543325.1;Name=WP_005543325.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=JYJ20_RS05825;product=30S ribosomal protein S12;protein_id=WP_005543325.1;transl_table=11 NZ_JAFIRP010000012.1 RefSeq gene 3831 4790 . - . ID=gene-JYJ20_RS05830;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=JYJ20_RS05830 NZ_JAFIRP010000012.1 Protein Homology CDS 3831 4790 . - 0 ID=cds-WP_006250332.1;Parent=gene-JYJ20_RS05830;Dbxref=GenBank:WP_006250332.1;Name=WP_006250332.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263212.1;locus_tag=JYJ20_RS05830;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_006250332.1;transl_table=11 NZ_JAFIRP010000012.1 RefSeq gene 4857 5894 . - . ID=gene-JYJ20_RS05835;Name=waaF;gbkey=Gene;gene=waaF;gene_biotype=protein_coding;locus_tag=JYJ20_RS05835 NZ_JAFIRP010000012.1 Protein Homology CDS 4857 5894 . - 0 ID=cds-WP_006250331.1;Parent=gene-JYJ20_RS05835;Dbxref=GenBank:WP_006250331.1;Name=WP_006250331.1;Ontology_term=GO:0009103,GO:0008920,GO:0016757;gbkey=CDS;gene=waaF;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA,glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250331.1;locus_tag=JYJ20_RS05835;product=lipopolysaccharide heptosyltransferase II;protein_id=WP_006250331.1;transl_table=11 NZ_JAFIRP010000012.1 RefSeq gene 6005 6421 . - . ID=gene-JYJ20_RS05840;Name=JYJ20_RS05840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05840 NZ_JAFIRP010000012.1 Protein Homology CDS 6005 6421 . - 0 ID=cds-WP_006250330.1;Parent=gene-JYJ20_RS05840;Dbxref=GenBank:WP_006250330.1;Name=WP_006250330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250330.1;locus_tag=JYJ20_RS05840;product=MliC family protein;protein_id=WP_006250330.1;transl_table=11 NZ_JAFIRP010000012.1 RefSeq gene 6485 7804 . - . ID=gene-JYJ20_RS05845;Name=JYJ20_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05845 NZ_JAFIRP010000012.1 Protein Homology CDS 6485 7804 . - 0 ID=cds-WP_209026073.1;Parent=gene-JYJ20_RS05845;Dbxref=GenBank:WP_209026073.1;Name=WP_209026073.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253337.1;locus_tag=JYJ20_RS05845;product=LysM-like peptidoglycan-binding domain-containing protein;protein_id=WP_209026073.1;transl_table=11 NZ_JAFIRP010000012.1 RefSeq gene 8097 8435 . + . ID=gene-JYJ20_RS05850;Name=JYJ20_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05850 NZ_JAFIRP010000012.1 Protein Homology CDS 8097 8435 . + 0 ID=cds-WP_006251644.1;Parent=gene-JYJ20_RS05850;Dbxref=GenBank:WP_006251644.1;Name=WP_006251644.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251644.1;locus_tag=JYJ20_RS05850;product=ComEA family DNA-binding protein;protein_id=WP_006251644.1;transl_table=11 NZ_JAFIRP010000012.1 RefSeq gene 8600 9493 . + . ID=gene-JYJ20_RS05855;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=JYJ20_RS05855 NZ_JAFIRP010000012.1 Protein Homology CDS 8600 9493 . + 0 ID=cds-WP_006251643.1;Parent=gene-JYJ20_RS05855;Dbxref=GenBank:WP_006251643.1;Name=WP_006251643.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251643.1;locus_tag=JYJ20_RS05855;product=archaetidylserine decarboxylase;protein_id=WP_006251643.1;transl_table=11 NZ_JAFIRP010000012.1 RefSeq gene 9565 11916 . + . ID=gene-JYJ20_RS05860;Name=hsdR;gbkey=Gene;gene=hsdR;gene_biotype=protein_coding;locus_tag=JYJ20_RS05860 NZ_JAFIRP010000012.1 Protein Homology CDS 9565 11916 . + 0 ID=cds-WP_061887089.1;Parent=gene-JYJ20_RS05860;Dbxref=GenBank:WP_061887089.1;Name=WP_061887089.1;Ontology_term=GO:0009307,GO:0003678,GO:0015666;gbkey=CDS;gene=hsdR;go_function=DNA helicase activity|0003678||IEA,restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_135710043.1;locus_tag=JYJ20_RS05860;product=EcoAI/FtnUII family type I restriction enzme subunit R;protein_id=WP_061887089.1;transl_table=11 NZ_JAFIRP010000012.1 RefSeq gene 11964 13433 . + . ID=gene-JYJ20_RS05865;Name=JYJ20_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05865 NZ_JAFIRP010000012.1 Protein Homology CDS 11964 13433 . + 0 ID=cds-WP_006250002.1;Parent=gene-JYJ20_RS05865;Dbxref=GenBank:WP_006250002.1;Name=WP_006250002.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605245.1;locus_tag=JYJ20_RS05865;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_006250002.1;transl_table=11 NZ_JAFIRP010000012.1 RefSeq gene 13446 15293 . + . ID=gene-JYJ20_RS05870;Name=JYJ20_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05870 NZ_JAFIRP010000012.1 Protein Homology CDS 13446 15293 . + 0 ID=cds-WP_245155388.1;Parent=gene-JYJ20_RS05870;Dbxref=GenBank:WP_245155388.1;Name=WP_245155388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874796.1;locus_tag=JYJ20_RS05870;product=Fic family protein;protein_id=WP_245155388.1;transl_table=11 NZ_JAFIRP010000012.1 RefSeq gene 15316 16329 . + . ID=gene-JYJ20_RS05875;Name=JYJ20_RS05875;end_range=16329,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05875;partial=true NZ_JAFIRP010000012.1 Protein Homology CDS 15316 16329 . + 0 ID=cds-WP_209026074.1;Parent=gene-JYJ20_RS05875;Dbxref=GenBank:WP_209026074.1;Name=WP_209026074.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;end_range=16329,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015586945.1;locus_tag=JYJ20_RS05875;partial=true;product=restriction endonuclease subunit S;protein_id=WP_209026074.1;transl_table=11 ##sequence-region NZ_JAFIRP010000013.1 1 19490 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000013.1 RefSeq region 1 19490 . + . ID=NZ_JAFIRP010000013.1:1..19490;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000013.1 RefSeq gene 1 3091 . - . ID=gene-JYJ20_RS05880;Name=JYJ20_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05880;partial=true;start_range=.,1 NZ_JAFIRP010000013.1 Protein Homology CDS 1 3091 . - 0 ID=cds-WP_280633517.1;Parent=gene-JYJ20_RS05880;Dbxref=GenBank:WP_280633517.1;Name=WP_280633517.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251793.1;locus_tag=JYJ20_RS05880;partial=true;product=S6 family peptidase;protein_id=WP_280633517.1;start_range=.,1;transl_table=11 NZ_JAFIRP010000013.1 RefSeq gene 3411 5177 . - . ID=gene-JYJ20_RS05885;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=JYJ20_RS05885 NZ_JAFIRP010000013.1 Protein Homology CDS 3411 5177 . - 0 ID=cds-WP_006249628.1;Parent=gene-JYJ20_RS05885;Dbxref=GenBank:WP_006249628.1;Name=WP_006249628.1;Ontology_term=GO:0006422,GO:0004815,GO:0005524,GO:0005737;gbkey=CDS;gene=aspS;go_component=cytoplasm|0005737||IEA;go_function=aspartate-tRNA ligase activity|0004815||IEA,ATP binding|0005524||IEA;go_process=aspartyl-tRNA aminoacylation|0006422||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249628.1;locus_tag=JYJ20_RS05885;product=aspartate--tRNA ligase;protein_id=WP_006249628.1;transl_table=11 NZ_JAFIRP010000013.1 RefSeq gene 5332 6243 . - . ID=gene-JYJ20_RS05890;Name=JYJ20_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05890 NZ_JAFIRP010000013.1 Protein Homology CDS 5332 6243 . - 0 ID=cds-WP_006249627.1;Parent=gene-JYJ20_RS05890;Dbxref=GenBank:WP_006249627.1;Name=WP_006249627.1;Ontology_term=GO:1903401,GO:0015661;gbkey=CDS;go_function=L-lysine efflux transmembrane transporter activity|0015661||IEA;go_process=L-lysine transmembrane transport|1903401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991039.1;locus_tag=JYJ20_RS05890;product=LysO family transporter;protein_id=WP_006249627.1;transl_table=11 NZ_JAFIRP010000013.1 RefSeq gene 6366 7448 . + . ID=gene-JYJ20_RS05895;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=JYJ20_RS05895 NZ_JAFIRP010000013.1 Protein Homology CDS 6366 7448 . + 0 ID=cds-WP_209026075.1;Parent=gene-JYJ20_RS05895;Dbxref=GenBank:WP_209026075.1;Name=WP_209026075.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251796.1;locus_tag=JYJ20_RS05895;product=DNA polymerase IV;protein_id=WP_209026075.1;transl_table=11 NZ_JAFIRP010000013.1 RefSeq gene 7536 8405 . + . ID=gene-JYJ20_RS05900;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=JYJ20_RS05900 NZ_JAFIRP010000013.1 Protein Homology CDS 7536 8405 . + 0 ID=cds-WP_006253684.1;Parent=gene-JYJ20_RS05900;Dbxref=GenBank:WP_006253684.1;Name=WP_006253684.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604779.1;locus_tag=JYJ20_RS05900;product=protease HtpX;protein_id=WP_006253684.1;transl_table=11 NZ_JAFIRP010000013.1 RefSeq gene 8459 8953 . - . ID=gene-JYJ20_RS05905;Name=JYJ20_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05905 NZ_JAFIRP010000013.1 Protein Homology CDS 8459 8953 . - 0 ID=cds-WP_006253683.1;Parent=gene-JYJ20_RS05905;Dbxref=GenBank:WP_006253683.1;Name=WP_006253683.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253683.1;locus_tag=JYJ20_RS05905;product=YqaA family protein;protein_id=WP_006253683.1;transl_table=11 NZ_JAFIRP010000013.1 RefSeq gene 9154 9978 . + . ID=gene-JYJ20_RS05910;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=JYJ20_RS05910 NZ_JAFIRP010000013.1 Protein Homology CDS 9154 9978 . + 0 ID=cds-WP_006249873.1;Parent=gene-JYJ20_RS05910;Dbxref=GenBank:WP_006249873.1;Name=WP_006249873.1;Ontology_term=GO:0015724,GO:0015499,GO:0005886;gbkey=CDS;gene=focA;go_component=plasma membrane|0005886||IEA;go_function=formate transmembrane transporter activity|0015499||IEA;go_process=formate transport|0015724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263076.1;locus_tag=JYJ20_RS05910;product=formate transporter FocA;protein_id=WP_006249873.1;transl_table=11 NZ_JAFIRP010000013.1 RefSeq gene 10068 12392 . + . ID=gene-JYJ20_RS05915;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=JYJ20_RS05915 NZ_JAFIRP010000013.1 Protein Homology CDS 10068 12392 . + 0 ID=cds-WP_006249872.1;Parent=gene-JYJ20_RS05915;Dbxref=GenBank:WP_006249872.1;Name=WP_006249872.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601494.1;locus_tag=JYJ20_RS05915;product=formate C-acetyltransferase;protein_id=WP_006249872.1;transl_table=11 NZ_JAFIRP010000013.1 RefSeq gene 12627 13652 . + . ID=gene-JYJ20_RS05920;Name=JYJ20_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05920 NZ_JAFIRP010000013.1 Protein Homology CDS 12627 13652 . + 0 ID=cds-WP_006250030.1;Parent=gene-JYJ20_RS05920;Dbxref=GenBank:WP_006250030.1;Name=WP_006250030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250030.1;locus_tag=JYJ20_RS05920;product=virulence RhuM family protein;protein_id=WP_006250030.1;transl_table=11 NZ_JAFIRP010000013.1 RefSeq gene 13901 14641 . + . ID=gene-JYJ20_RS05925;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=JYJ20_RS05925 NZ_JAFIRP010000013.1 Protein Homology CDS 13901 14641 . + 0 ID=cds-WP_044426939.1;Parent=gene-JYJ20_RS05925;Dbxref=GenBank:WP_044426939.1;Name=WP_044426939.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250031.1;locus_tag=JYJ20_RS05925;product=pyruvate formate lyase 1-activating protein;protein_id=WP_044426939.1;transl_table=11 NZ_JAFIRP010000013.1 RefSeq gene 14772 16838 . + . ID=gene-JYJ20_RS05930;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=JYJ20_RS05930 NZ_JAFIRP010000013.1 Protein Homology CDS 14772 16838 . + 0 ID=cds-WP_015484562.1;Parent=gene-JYJ20_RS05930;Dbxref=GenBank:WP_015484562.1;Name=WP_015484562.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484562.1;locus_tag=JYJ20_RS05930;product=oligopeptidase A;protein_id=WP_015484562.1;transl_table=11 NZ_JAFIRP010000013.1 RefSeq gene 16960 18117 . + . ID=gene-JYJ20_RS05935;Name=JYJ20_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05935 NZ_JAFIRP010000013.1 Protein Homology CDS 16960 18117 . + 0 ID=cds-WP_006250033.1;Parent=gene-JYJ20_RS05935;Dbxref=GenBank:WP_006250033.1;Name=WP_006250033.1;Ontology_term=GO:0009094,GO:0009095,GO:0004106,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=chorismate mutase activity|0004106||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,aromatic amino acid family biosynthetic process%2C prephenate pathway|0009095||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991031.1;locus_tag=JYJ20_RS05935;product=chorismate mutase;protein_id=WP_006250033.1;transl_table=11 NZ_JAFIRP010000013.1 RefSeq gene 18176 18391 . - . ID=gene-JYJ20_RS05940;Name=JYJ20_RS05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05940 NZ_JAFIRP010000013.1 Protein Homology CDS 18176 18391 . - 0 ID=cds-WP_006250034.1;Parent=gene-JYJ20_RS05940;Dbxref=GenBank:WP_006250034.1;Name=WP_006250034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014990986.1;locus_tag=JYJ20_RS05940;product=HP1242/YdcH family protein;protein_id=WP_006250034.1;transl_table=11 NZ_JAFIRP010000013.1 RefSeq gene 18581 19396 . + . ID=gene-JYJ20_RS05945;Name=JYJ20_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05945 NZ_JAFIRP010000013.1 Protein Homology CDS 18581 19396 . + 0 ID=cds-WP_134916553.1;Parent=gene-JYJ20_RS05945;Dbxref=GenBank:WP_134916553.1;Name=WP_134916553.1;Ontology_term=GO:0009813,GO:0045430;gbkey=CDS;go_function=chalcone isomerase activity|0045430||IEA;go_process=flavonoid biosynthetic process|0009813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253222.1;locus_tag=JYJ20_RS05945;product=chalcone isomerase family protein;protein_id=WP_134916553.1;transl_table=11 ##sequence-region NZ_JAFIRP010000014.1 1 17007 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000014.1 RefSeq region 1 17007 . + . ID=NZ_JAFIRP010000014.1:1..17007;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000014.1 RefSeq gene 219 395 . + . ID=gene-JYJ20_RS12345;Name=JYJ20_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12345 NZ_JAFIRP010000014.1 Protein Homology CDS 219 395 . + 0 ID=cds-WP_308064781.1;Parent=gene-JYJ20_RS12345;Dbxref=GenBank:WP_308064781.1;Name=WP_308064781.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019619.7;locus_tag=JYJ20_RS12345;product=JmjC domain-containing protein;protein_id=WP_308064781.1;transl_table=11 NZ_JAFIRP010000014.1 RefSeq gene 385 1035 . + . ID=gene-JYJ20_RS05955;Name=JYJ20_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05955 NZ_JAFIRP010000014.1 Protein Homology CDS 385 1035 . + 0 ID=cds-WP_015484678.1;Parent=gene-JYJ20_RS05955;Dbxref=GenBank:WP_015484678.1;Name=WP_015484678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253346.1;locus_tag=JYJ20_RS05955;product=JmjC domain-containing protein;protein_id=WP_015484678.1;transl_table=11 NZ_JAFIRP010000014.1 RefSeq gene 1708 2055 . + . ID=gene-JYJ20_RS05960;Name=JYJ20_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05960 NZ_JAFIRP010000014.1 Protein Homology CDS 1708 2055 . + 0 ID=cds-WP_006250713.1;Parent=gene-JYJ20_RS05960;Dbxref=GenBank:WP_006250713.1;Name=WP_006250713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250713.1;locus_tag=JYJ20_RS05960;product=hypothetical protein;protein_id=WP_006250713.1;transl_table=11 NZ_JAFIRP010000014.1 RefSeq gene 2052 2969 . + . ID=gene-JYJ20_RS05965;Name=JYJ20_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05965 NZ_JAFIRP010000014.1 GeneMarkS-2+ CDS 2052 2969 . + 0 ID=cds-WP_006250714.1;Parent=gene-JYJ20_RS05965;Dbxref=GenBank:WP_006250714.1;Name=WP_006250714.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS05965;product=HlyD family secretion protein;protein_id=WP_006250714.1;transl_table=11 NZ_JAFIRP010000014.1 RefSeq pseudogene 3068 4221 . + . ID=gene-JYJ20_RS12450;Name=JYJ20_RS12450;end_range=4221,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS12450;partial=true;pseudo=true NZ_JAFIRP010000014.1 Protein Homology CDS 3068 4221 . + 0 ID=cds-JYJ20_RS12450;Parent=gene-JYJ20_RS12450;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0140359,GO:0016020;end_range=4221,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012869.7;locus_tag=JYJ20_RS12450;partial=true;product=ABC transporter transmembrane domain-containing protein;pseudo=true;transl_table=11 NZ_JAFIRP010000014.1 RefSeq gene 4285 4857 . + . ID=gene-JYJ20_RS12455;Name=JYJ20_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12455 NZ_JAFIRP010000014.1 Protein Homology CDS 4285 4857 . + 0 ID=cds-WP_228370074.1;Parent=gene-JYJ20_RS12455;Dbxref=GenBank:WP_228370074.1;Name=WP_228370074.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=JYJ20_RS12455;product=ATP-binding cassette domain-containing protein;protein_id=WP_228370074.1;transl_table=11 NZ_JAFIRP010000014.1 RefSeq gene 4861 5055 . + . ID=gene-JYJ20_RS12130;Name=JYJ20_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12130 NZ_JAFIRP010000014.1 Protein Homology CDS 4861 5055 . + 0 ID=cds-WP_006253345.1;Parent=gene-JYJ20_RS12130;Dbxref=GenBank:WP_006253345.1;Name=WP_006253345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253345.1;locus_tag=JYJ20_RS12130;product=P-loop NTPase family protein;protein_id=WP_006253345.1;transl_table=11 NZ_JAFIRP010000014.1 RefSeq gene 5057 5725 . - . ID=gene-JYJ20_RS05980;Name=JYJ20_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05980 NZ_JAFIRP010000014.1 Protein Homology CDS 5057 5725 . - 0 ID=cds-WP_006247895.1;Parent=gene-JYJ20_RS05980;Dbxref=GenBank:WP_006247895.1;Name=WP_006247895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253092.1;locus_tag=JYJ20_RS05980;product=thermonuclease family protein;protein_id=WP_006247895.1;transl_table=11 NZ_JAFIRP010000014.1 RefSeq gene 5769 7136 . - . ID=gene-JYJ20_RS05985;Name=JYJ20_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05985 NZ_JAFIRP010000014.1 Protein Homology CDS 5769 7136 . - 0 ID=cds-WP_006247896.1;Parent=gene-JYJ20_RS05985;Dbxref=GenBank:WP_006247896.1;Name=WP_006247896.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263108.1;locus_tag=JYJ20_RS05985;product=alanine/glycine:cation symporter family protein;protein_id=WP_006247896.1;transl_table=11 NZ_JAFIRP010000014.1 cmsearch riboswitch 7255 7350 . - . ID=id-NZ_JAFIRP010000014.1:7255..7350;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAFIRP010000014.1 RefSeq gene 7521 8573 . - . ID=gene-JYJ20_RS05990;Name=JYJ20_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS05990 NZ_JAFIRP010000014.1 Protein Homology CDS 7521 8573 . - 0 ID=cds-WP_006247898.1;Parent=gene-JYJ20_RS05990;Dbxref=GenBank:WP_006247898.1;Name=WP_006247898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247898.1;locus_tag=JYJ20_RS05990;product=AI-2E family transporter;protein_id=WP_006247898.1;transl_table=11 NZ_JAFIRP010000014.1 RefSeq gene 8620 9045 . - . ID=gene-JYJ20_RS05995;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=JYJ20_RS05995 NZ_JAFIRP010000014.1 Protein Homology CDS 8620 9045 . - 0 ID=cds-WP_006247899.1;Parent=gene-JYJ20_RS05995;Dbxref=GenBank:WP_006247899.1;Name=WP_006247899.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247899.1;locus_tag=JYJ20_RS05995;product=Holliday junction resolvase RuvX;protein_id=WP_006247899.1;transl_table=11 NZ_JAFIRP010000014.1 RefSeq gene 9045 9605 . - . ID=gene-JYJ20_RS06000;Name=JYJ20_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06000 NZ_JAFIRP010000014.1 Protein Homology CDS 9045 9605 . - 0 ID=cds-WP_209026076.1;Parent=gene-JYJ20_RS06000;Dbxref=GenBank:WP_209026076.1;Name=WP_209026076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991139.1;locus_tag=JYJ20_RS06000;product=YqgE/AlgH family protein;protein_id=WP_209026076.1;transl_table=11 NZ_JAFIRP010000014.1 RefSeq gene 9605 10336 . - . ID=gene-JYJ20_RS06005;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=JYJ20_RS06005 NZ_JAFIRP010000014.1 Protein Homology CDS 9605 10336 . - 0 ID=cds-WP_020824157.1;Parent=gene-JYJ20_RS06005;Dbxref=GenBank:WP_020824157.1;Name=WP_020824157.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007524366.1;locus_tag=JYJ20_RS06005;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_020824157.1;transl_table=11 NZ_JAFIRP010000014.1 RefSeq gene 10396 10686 . - . ID=gene-JYJ20_RS06010;Name=JYJ20_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06010 NZ_JAFIRP010000014.1 Protein Homology CDS 10396 10686 . - 0 ID=cds-WP_209026077.1;Parent=gene-JYJ20_RS06010;Dbxref=GenBank:WP_209026077.1;Name=WP_209026077.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253344.1;locus_tag=JYJ20_RS06010;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_209026077.1;transl_table=11 NZ_JAFIRP010000014.1 RefSeq gene 10667 10840 . - . ID=gene-JYJ20_RS06015;Name=JYJ20_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06015 NZ_JAFIRP010000014.1 Protein Homology CDS 10667 10840 . - 0 ID=cds-WP_006247903.1;Parent=gene-JYJ20_RS06015;Dbxref=GenBank:WP_006247903.1;Name=WP_006247903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253094.1;locus_tag=JYJ20_RS06015;product=hypothetical protein;protein_id=WP_006247903.1;transl_table=11 NZ_JAFIRP010000014.1 RefSeq gene 11012 11599 . - . ID=gene-JYJ20_RS06020;Name=JYJ20_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06020 NZ_JAFIRP010000014.1 Protein Homology CDS 11012 11599 . - 0 ID=cds-WP_006250721.1;Parent=gene-JYJ20_RS06020;Dbxref=GenBank:WP_006250721.1;Name=WP_006250721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262747.1;locus_tag=JYJ20_RS06020;product=YajG family lipoprotein;protein_id=WP_006250721.1;transl_table=11 NZ_JAFIRP010000014.1 RefSeq gene 11691 12002 . + . ID=gene-JYJ20_RS06025;Name=JYJ20_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06025 NZ_JAFIRP010000014.1 Protein Homology CDS 11691 12002 . + 0 ID=cds-WP_006253343.1;Parent=gene-JYJ20_RS06025;Dbxref=GenBank:WP_006253343.1;Name=WP_006253343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991840.1;locus_tag=JYJ20_RS06025;product=BolA family protein;protein_id=WP_006253343.1;transl_table=11 NZ_JAFIRP010000014.1 RefSeq gene 12094 12183 . + . ID=gene-JYJ20_RS06030;Name=JYJ20_RS06030;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS06030 NZ_JAFIRP010000014.1 tRNAscan-SE tRNA 12094 12183 . + . ID=rna-JYJ20_RS06030;Parent=gene-JYJ20_RS06030;anticodon=(pos:12128..12130);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS06030;product=tRNA-Ser NZ_JAFIRP010000014.1 tRNAscan-SE exon 12094 12183 . + . ID=exon-JYJ20_RS06030-1;Parent=rna-JYJ20_RS06030;anticodon=(pos:12128..12130);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS06030;product=tRNA-Ser NZ_JAFIRP010000014.1 RefSeq gene 12360 12734 . - . ID=gene-JYJ20_RS06035;Name=JYJ20_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06035 NZ_JAFIRP010000014.1 Protein Homology CDS 12360 12734 . - 0 ID=cds-WP_006249302.1;Parent=gene-JYJ20_RS06035;Dbxref=GenBank:WP_006249302.1;Name=WP_006249302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249302.1;locus_tag=JYJ20_RS06035;product=copper resistance protein NlpE;protein_id=WP_006249302.1;transl_table=11 NZ_JAFIRP010000014.1 RefSeq gene 12759 13061 . - . ID=gene-JYJ20_RS06040;Name=JYJ20_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06040 NZ_JAFIRP010000014.1 Protein Homology CDS 12759 13061 . - 0 ID=cds-WP_006249303.1;Parent=gene-JYJ20_RS06040;Dbxref=GenBank:WP_006249303.1;Name=WP_006249303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249303.1;locus_tag=JYJ20_RS06040;product=DciA family protein;protein_id=WP_006249303.1;transl_table=11 NZ_JAFIRP010000014.1 RefSeq gene 13182 13502 . + . ID=gene-JYJ20_RS06045;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=JYJ20_RS06045 NZ_JAFIRP010000014.1 Protein Homology CDS 13182 13502 . + 0 ID=cds-WP_006249304.1;Parent=gene-JYJ20_RS06045;Dbxref=GenBank:WP_006249304.1;Name=WP_006249304.1;gbkey=CDS;gene=secM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249304.1;locus_tag=JYJ20_RS06045;product=secA translation cis-regulator SecM;protein_id=WP_006249304.1;transl_table=11 NZ_JAFIRP010000014.1 RefSeq gene 13561 16287 . + . ID=gene-JYJ20_RS06050;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=JYJ20_RS06050 NZ_JAFIRP010000014.1 Protein Homology CDS 13561 16287 . + 0 ID=cds-WP_021280218.1;Parent=gene-JYJ20_RS06050;Dbxref=GenBank:WP_021280218.1;Name=WP_021280218.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616700.1;locus_tag=JYJ20_RS06050;product=preprotein translocase subunit SecA;protein_id=WP_021280218.1;transl_table=11 NZ_JAFIRP010000014.1 RefSeq gene 16374 16772 . + . ID=gene-JYJ20_RS06055;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=JYJ20_RS06055 NZ_JAFIRP010000014.1 Protein Homology CDS 16374 16772 . + 0 ID=cds-WP_006250724.1;Parent=gene-JYJ20_RS06055;Dbxref=GenBank:WP_006250724.1;Name=WP_006250724.1;Ontology_term=GO:0006281,GO:0016818;gbkey=CDS;gene=mutT;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991833.1;locus_tag=JYJ20_RS06055;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_006250724.1;transl_table=11 ##sequence-region NZ_JAFIRP010000015.1 1 42437 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000015.1 RefSeq region 1 42437 . + . ID=NZ_JAFIRP010000015.1:1..42437;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000015.1 RefSeq gene 57 143 . + . ID=gene-JYJ20_RS06060;Name=JYJ20_RS06060;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS06060 NZ_JAFIRP010000015.1 tRNAscan-SE tRNA 57 143 . + . ID=rna-JYJ20_RS06060;Parent=gene-JYJ20_RS06060;anticodon=(pos:91..93);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS06060;product=tRNA-Leu NZ_JAFIRP010000015.1 tRNAscan-SE exon 57 143 . + . ID=exon-JYJ20_RS06060-1;Parent=rna-JYJ20_RS06060;anticodon=(pos:91..93);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS06060;product=tRNA-Leu NZ_JAFIRP010000015.1 RefSeq gene 165 240 . + . ID=gene-JYJ20_RS06065;Name=JYJ20_RS06065;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS06065 NZ_JAFIRP010000015.1 tRNAscan-SE tRNA 165 240 . + . ID=rna-JYJ20_RS06065;Parent=gene-JYJ20_RS06065;anticodon=(pos:198..200);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS06065;product=tRNA-Gly NZ_JAFIRP010000015.1 tRNAscan-SE exon 165 240 . + . ID=exon-JYJ20_RS06065-1;Parent=rna-JYJ20_RS06065;anticodon=(pos:198..200);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS06065;product=tRNA-Gly NZ_JAFIRP010000015.1 RefSeq gene 328 1113 . + . ID=gene-JYJ20_RS06070;Name=JYJ20_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06070 NZ_JAFIRP010000015.1 Protein Homology CDS 328 1113 . + 0 ID=cds-WP_006251768.1;Parent=gene-JYJ20_RS06070;Dbxref=GenBank:WP_006251768.1;Name=WP_006251768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251768.1;locus_tag=JYJ20_RS06070;product=Rossmann-fold NAD(P)-binding domain-containing protein;protein_id=WP_006251768.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 1187 2047 . + . ID=gene-JYJ20_RS06075;Name=JYJ20_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06075 NZ_JAFIRP010000015.1 Protein Homology CDS 1187 2047 . + 0 ID=cds-WP_006250124.1;Parent=gene-JYJ20_RS06075;Dbxref=GenBank:WP_006250124.1;Name=WP_006250124.1;Ontology_term=GO:0030001,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250124.1;locus_tag=JYJ20_RS06075;product=metal ABC transporter permease;protein_id=WP_006250124.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 2040 2849 . + . ID=gene-JYJ20_RS06080;Name=JYJ20_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06080 NZ_JAFIRP010000015.1 Protein Homology CDS 2040 2849 . + 0 ID=cds-WP_006250123.1;Parent=gene-JYJ20_RS06080;Dbxref=GenBank:WP_006250123.1;Name=WP_006250123.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250123.1;locus_tag=JYJ20_RS06080;product=metal ABC transporter permease;protein_id=WP_006250123.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 2906 3649 . - . ID=gene-JYJ20_RS06085;Name=JYJ20_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06085 NZ_JAFIRP010000015.1 Protein Homology CDS 2906 3649 . - 0 ID=cds-WP_006250122.1;Parent=gene-JYJ20_RS06085;Dbxref=GenBank:WP_006250122.1;Name=WP_006250122.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250122.1;locus_tag=JYJ20_RS06085;product=metal ABC transporter ATP-binding protein;protein_id=WP_006250122.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 3662 4558 . - . ID=gene-JYJ20_RS06090;Name=JYJ20_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06090 NZ_JAFIRP010000015.1 Protein Homology CDS 3662 4558 . - 0 ID=cds-WP_006251769.1;Parent=gene-JYJ20_RS06090;Dbxref=GenBank:WP_006251769.1;Name=WP_006251769.1;Ontology_term=GO:0030001,GO:0005524,GO:0042626,GO:0046872,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,ABC-type transporter activity|0140359||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596167.1;locus_tag=JYJ20_RS06090;product=metal ABC transporter substrate-binding protein;protein_id=WP_006251769.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 4818 5978 . + . ID=gene-JYJ20_RS06095;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;gene_synonym=trmG;locus_tag=JYJ20_RS06095 NZ_JAFIRP010000015.1 Protein Homology CDS 4818 5978 . + 0 ID=cds-WP_020831129.1;Parent=gene-JYJ20_RS06095;Dbxref=GenBank:WP_020831129.1;Name=WP_020831129.1;gbkey=CDS;gene=rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253631.1;locus_tag=JYJ20_RS06095;product=dual-specificity RNA methyltransferase RlmN;protein_id=WP_020831129.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 6019 6366 . - . ID=gene-JYJ20_RS06100;Name=JYJ20_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06100 NZ_JAFIRP010000015.1 Protein Homology CDS 6019 6366 . - 0 ID=cds-WP_006251771.1;Parent=gene-JYJ20_RS06100;Dbxref=GenBank:WP_006251771.1;Name=WP_006251771.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015702293.1;locus_tag=JYJ20_RS06100;product=helix-turn-helix domain-containing protein;protein_id=WP_006251771.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 6350 6601 . - . ID=gene-JYJ20_RS06105;Name=JYJ20_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06105 NZ_JAFIRP010000015.1 Protein Homology CDS 6350 6601 . - 0 ID=cds-WP_006251772.1;Parent=gene-JYJ20_RS06105;Dbxref=GenBank:WP_006251772.1;Name=WP_006251772.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251772.1;locus_tag=JYJ20_RS06105;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_006251772.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 6821 7375 . + . ID=gene-JYJ20_RS06110;Name=pilW;gbkey=Gene;gene=pilW;gene_biotype=protein_coding;locus_tag=JYJ20_RS06110 NZ_JAFIRP010000015.1 Protein Homology CDS 6821 7375 . + 0 ID=cds-WP_006251773.1;Parent=gene-JYJ20_RS06110;Dbxref=GenBank:WP_006251773.1;Name=WP_006251773.1;Ontology_term=GO:0005515;gbkey=CDS;gene=pilW;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251773.1;locus_tag=JYJ20_RS06110;product=type IV pilus biogenesis/stability protein PilW;protein_id=WP_006251773.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 7375 9699 . + . ID=gene-JYJ20_RS06115;Name=JYJ20_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06115 NZ_JAFIRP010000015.1 Protein Homology CDS 7375 9699 . + 0 ID=cds-WP_021279567.1;Parent=gene-JYJ20_RS06115;Dbxref=GenBank:WP_021279567.1;Name=WP_021279567.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263162.1;locus_tag=JYJ20_RS06115;product=Tex family protein;protein_id=WP_021279567.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 9770 10333 . - . ID=gene-JYJ20_RS06120;Name=JYJ20_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06120 NZ_JAFIRP010000015.1 Protein Homology CDS 9770 10333 . - 0 ID=cds-WP_209026078.1;Parent=gene-JYJ20_RS06120;Dbxref=GenBank:WP_209026078.1;Name=WP_209026078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249720.1;locus_tag=JYJ20_RS06120;product=nitroreductase family protein;protein_id=WP_209026078.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 10441 12297 . + . ID=gene-JYJ20_RS06125;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=JYJ20_RS06125 NZ_JAFIRP010000015.1 Protein Homology CDS 10441 12297 . + 0 ID=cds-WP_006249718.1;Parent=gene-JYJ20_RS06125;Dbxref=GenBank:WP_006249718.1;Name=WP_006249718.1;Ontology_term=GO:0006508,GO:0051604,GO:0008233,GO:0016020;gbkey=CDS;gene=sppA;go_component=membrane|0016020||IEA;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249718.1;locus_tag=JYJ20_RS06125;product=signal peptide peptidase SppA;protein_id=WP_006249718.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 12338 12541 . - . ID=gene-JYJ20_RS12350;Name=JYJ20_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12350 NZ_JAFIRP010000015.1 Protein Homology CDS 12338 12541 . - 0 ID=cds-WP_006249717.1;Parent=gene-JYJ20_RS12350;Dbxref=GenBank:WP_006249717.1;Name=WP_006249717.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249717.1;locus_tag=JYJ20_RS12350;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_006249717.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 12522 12731 . - . ID=gene-JYJ20_RS12460;Name=JYJ20_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12460 NZ_JAFIRP010000015.1 Protein Homology CDS 12522 12731 . - 0 ID=cds-WP_080542704.1;Parent=gene-JYJ20_RS12460;Dbxref=GenBank:WP_080542704.1;Name=WP_080542704.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: protein motif:HMM:NF015737.7;locus_tag=JYJ20_RS12460;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_080542704.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 12770 13942 . - . ID=gene-JYJ20_RS06140;Name=cytX;gbkey=Gene;gene=cytX;gene_biotype=protein_coding;locus_tag=JYJ20_RS06140 NZ_JAFIRP010000015.1 Protein Homology CDS 12770 13942 . - 0 ID=cds-WP_006249715.1;Parent=gene-JYJ20_RS06140;Dbxref=GenBank:WP_006249715.1;Name=WP_006249715.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=cytX;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249715.1;locus_tag=JYJ20_RS06140;product=putative hydroxymethylpyrimidine transporter CytX;protein_id=WP_006249715.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 13935 15464 . - . ID=gene-JYJ20_RS06145;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=JYJ20_RS06145 NZ_JAFIRP010000015.1 Protein Homology CDS 13935 15464 . - 0 ID=cds-WP_006251778.1;Parent=gene-JYJ20_RS06145;Dbxref=GenBank:WP_006251778.1;Name=WP_006251778.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251778.1;locus_tag=JYJ20_RS06145;product=thiamine phosphate synthase;protein_id=WP_006251778.1;transl_table=11 NZ_JAFIRP010000015.1 cmsearch riboswitch 15532 15628 . - . ID=id-NZ_JAFIRP010000015.1:15532..15628;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAFIRP010000015.1 RefSeq gene 15764 17077 . - . ID=gene-JYJ20_RS06150;Name=JYJ20_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06150 NZ_JAFIRP010000015.1 Protein Homology CDS 15764 17077 . - 0 ID=cds-WP_006249713.1;Parent=gene-JYJ20_RS06150;Dbxref=GenBank:WP_006249713.1;Name=WP_006249713.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249713.1;locus_tag=JYJ20_RS06150;product=MFS transporter;protein_id=WP_006249713.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 17070 17888 . - . ID=gene-JYJ20_RS06155;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=JYJ20_RS06155 NZ_JAFIRP010000015.1 Protein Homology CDS 17070 17888 . - 0 ID=cds-WP_006249712.1;Parent=gene-JYJ20_RS06155;Dbxref=GenBank:WP_006249712.1;Name=WP_006249712.1;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249712.1;locus_tag=JYJ20_RS06155;product=hydroxyethylthiazole kinase;protein_id=WP_006249712.1;transl_table=11 NZ_JAFIRP010000015.1 cmsearch riboswitch 17945 18041 . - . ID=id-NZ_JAFIRP010000015.1:17945..18041;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAFIRP010000015.1 RefSeq gene 18098 19879 . - . ID=gene-JYJ20_RS06160;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=JYJ20_RS06160 NZ_JAFIRP010000015.1 Protein Homology CDS 18098 19879 . - 0 ID=cds-WP_006249710.1;Parent=gene-JYJ20_RS06160;Dbxref=GenBank:WP_006249710.1;Name=WP_006249710.1;Ontology_term=GO:0006260,GO:0008998,GO:0016491;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA,oxidoreductase activity|0016491||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611280.1;locus_tag=JYJ20_RS06160;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_006249710.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 19876 20349 . - . ID=gene-JYJ20_RS06165;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=JYJ20_RS06165 NZ_JAFIRP010000015.1 Protein Homology CDS 19876 20349 . - 0 ID=cds-WP_006249709.1;Parent=gene-JYJ20_RS06165;Dbxref=GenBank:WP_006249709.1;Name=WP_006249709.1;Ontology_term=GO:0009265,GO:0008998,GO:0043364,GO:0051536;gbkey=CDS;gene=nrdG;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA,glycyl-radical enzyme activating activity|0043364||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249709.1;locus_tag=JYJ20_RS06165;product=anaerobic ribonucleoside-triphosphate reductase activating protein;protein_id=WP_006249709.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 20562 20780 . - . ID=gene-JYJ20_RS06170;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=JYJ20_RS06170 NZ_JAFIRP010000015.1 Protein Homology CDS 20562 20780 . - 0 ID=cds-WP_006249708.1;Parent=gene-JYJ20_RS06170;Dbxref=GenBank:WP_006249708.1;Name=WP_006249708.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251779.1;locus_tag=JYJ20_RS06170;product=acetolactate synthase 2 small subunit;protein_id=WP_006249708.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 20790 22442 . - . ID=gene-JYJ20_RS06175;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=JYJ20_RS06175 NZ_JAFIRP010000015.1 Protein Homology CDS 20790 22442 . - 0 ID=cds-WP_006251780.1;Parent=gene-JYJ20_RS06175;Dbxref=GenBank:WP_006251780.1;Name=WP_006251780.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992040.1;locus_tag=JYJ20_RS06175;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_006251780.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 22784 24286 . + . ID=gene-JYJ20_RS06180;Name=nrfA;gbkey=Gene;gene=nrfA;gene_biotype=protein_coding;locus_tag=JYJ20_RS06180 NZ_JAFIRP010000015.1 Protein Homology CDS 22784 24286 . + 0 ID=cds-WP_006249706.1;Parent=gene-JYJ20_RS06180;Dbxref=GenBank:WP_006249706.1;Name=WP_006249706.1;Ontology_term=GO:0008152,GO:0005509,GO:0020037,GO:0042279,GO:0042597;gbkey=CDS;gene=nrfA;go_component=periplasmic space|0042597||IEA;go_function=calcium ion binding|0005509||IEA,heme binding|0020037||IEA,nitrite reductase (cytochrome%2C ammonia-forming) activity|0042279||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249706.1;locus_tag=JYJ20_RS06180;product=ammonia-forming nitrite reductase cytochrome c552 subunit;protein_id=WP_006249706.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 24305 24961 . + . ID=gene-JYJ20_RS06185;Name=nrfB;gbkey=Gene;gene=nrfB;gene_biotype=protein_coding;locus_tag=JYJ20_RS06185 NZ_JAFIRP010000015.1 Protein Homology CDS 24305 24961 . + 0 ID=cds-WP_006251781.1;Parent=gene-JYJ20_RS06185;Dbxref=GenBank:WP_006251781.1;Name=WP_006251781.1;Ontology_term=GO:0008152,GO:0042597;gbkey=CDS;gene=nrfB;go_component=periplasmic space|0042597||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603279.1;locus_tag=JYJ20_RS06185;product=cytochrome c nitrite reductase pentaheme subunit;protein_id=WP_006251781.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 24961 25638 . + . ID=gene-JYJ20_RS06190;Name=nrfC;gbkey=Gene;gene=nrfC;gene_biotype=protein_coding;locus_tag=JYJ20_RS06190 NZ_JAFIRP010000015.1 Protein Homology CDS 24961 25638 . + 0 ID=cds-WP_006249704.1;Parent=gene-JYJ20_RS06190;Dbxref=GenBank:WP_006249704.1;Name=WP_006249704.1;gbkey=CDS;gene=nrfC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007524349.1;locus_tag=JYJ20_RS06190;product=cytochrome c nitrite reductase Fe-S protein;protein_id=WP_006249704.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 25638 26585 . + . ID=gene-JYJ20_RS06195;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=JYJ20_RS06195 NZ_JAFIRP010000015.1 Protein Homology CDS 25638 26585 . + 0 ID=cds-WP_006249703.1;Parent=gene-JYJ20_RS06195;Dbxref=GenBank:WP_006249703.1;Name=WP_006249703.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848317.1;locus_tag=JYJ20_RS06195;product=cytochrome c nitrite reductase subunit NrfD;protein_id=WP_006249703.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 26855 28759 . + . ID=gene-JYJ20_RS06200;Name=nrfE;gbkey=Gene;gene=nrfE;gene_biotype=protein_coding;locus_tag=JYJ20_RS06200 NZ_JAFIRP010000015.1 Protein Homology CDS 26855 28759 . + 0 ID=cds-WP_209026079.1;Parent=gene-JYJ20_RS06200;Dbxref=GenBank:WP_209026079.1;Name=WP_209026079.1;gbkey=CDS;gene=nrfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249702.1;locus_tag=JYJ20_RS06200;product=heme lyase NrfEFG subunit NrfE;protein_id=WP_209026079.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 28756 29289 . + . ID=gene-JYJ20_RS06205;Name=JYJ20_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06205 NZ_JAFIRP010000015.1 Protein Homology CDS 28756 29289 . + 0 ID=cds-WP_006251785.1;Parent=gene-JYJ20_RS06205;Dbxref=GenBank:WP_006251785.1;Name=WP_006251785.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604798.1;locus_tag=JYJ20_RS06205;product=redoxin family protein;protein_id=WP_006251785.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 29279 29731 . + . ID=gene-JYJ20_RS06210;Name=nrfF;gbkey=Gene;gene=nrfF;gene_biotype=protein_coding;locus_tag=JYJ20_RS06210 NZ_JAFIRP010000015.1 Protein Homology CDS 29279 29731 . + 0 ID=cds-WP_006249700.1;Parent=gene-JYJ20_RS06210;Dbxref=GenBank:WP_006249700.1;Name=WP_006249700.1;gbkey=CDS;gene=nrfF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249700.1;locus_tag=JYJ20_RS06210;product=heme lyase NrfEFG subunit NrfF;protein_id=WP_006249700.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 29718 30479 . + . ID=gene-JYJ20_RS06215;Name=JYJ20_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06215 NZ_JAFIRP010000015.1 Protein Homology CDS 29718 30479 . + 0 ID=cds-WP_006249699.1;Parent=gene-JYJ20_RS06215;Dbxref=GenBank:WP_006249699.1;Name=WP_006249699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249699.1;locus_tag=JYJ20_RS06215;product=TPR domain-containing protein;protein_id=WP_006249699.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 30531 31925 . - . ID=gene-JYJ20_RS06220;Name=JYJ20_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06220 NZ_JAFIRP010000015.1 Protein Homology CDS 30531 31925 . - 0 ID=cds-WP_040081116.1;Parent=gene-JYJ20_RS06220;Dbxref=GenBank:WP_040081116.1;Name=WP_040081116.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617770.1;locus_tag=JYJ20_RS06220;product=Do family serine endopeptidase;protein_id=WP_040081116.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 32150 32953 . + . ID=gene-JYJ20_RS06225;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=JYJ20_RS06225 NZ_JAFIRP010000015.1 Protein Homology CDS 32150 32953 . + 0 ID=cds-WP_006249696.1;Parent=gene-JYJ20_RS06225;Dbxref=GenBank:WP_006249696.1;Name=WP_006249696.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249696.1;locus_tag=JYJ20_RS06225;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_006249696.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 32946 33722 . + . ID=gene-JYJ20_RS06230;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=JYJ20_RS06230 NZ_JAFIRP010000015.1 Protein Homology CDS 32946 33722 . + 0 ID=cds-WP_006249695.1;Parent=gene-JYJ20_RS06230;Dbxref=GenBank:WP_006249695.1;Name=WP_006249695.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651399.1;locus_tag=JYJ20_RS06230;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_006249695.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 33743 34267 . + . ID=gene-JYJ20_RS06235;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=JYJ20_RS06235 NZ_JAFIRP010000015.1 Protein Homology CDS 33743 34267 . + 0 ID=cds-WP_006249694.1;Parent=gene-JYJ20_RS06235;Dbxref=GenBank:WP_006249694.1;Name=WP_006249694.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598344.1;locus_tag=JYJ20_RS06235;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_006249694.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 34313 34948 . + . ID=gene-JYJ20_RS06240;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=JYJ20_RS06240 NZ_JAFIRP010000015.1 Protein Homology CDS 34313 34948 . + 0 ID=cds-WP_006249693.1;Parent=gene-JYJ20_RS06240;Dbxref=GenBank:WP_006249693.1;Name=WP_006249693.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249693.1;locus_tag=JYJ20_RS06240;product=phospholipid-binding protein MlaC;protein_id=WP_006249693.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 34960 35283 . + . ID=gene-JYJ20_RS06245;Name=JYJ20_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06245 NZ_JAFIRP010000015.1 Protein Homology CDS 34960 35283 . + 0 ID=cds-WP_006249692.1;Parent=gene-JYJ20_RS06245;Dbxref=GenBank:WP_006249692.1;Name=WP_006249692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249692.1;locus_tag=JYJ20_RS06245;product=STAS domain-containing protein;protein_id=WP_006249692.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 35316 35576 . + . ID=gene-JYJ20_RS06250;Name=JYJ20_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06250 NZ_JAFIRP010000015.1 Protein Homology CDS 35316 35576 . + 0 ID=cds-WP_006249691.1;Parent=gene-JYJ20_RS06250;Dbxref=GenBank:WP_006249691.1;Name=WP_006249691.1;Ontology_term=GO:0051604,GO:0051536,GO:1990229;gbkey=CDS;go_component=iron-sulfur cluster assembly complex|1990229||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598336.1;locus_tag=JYJ20_RS06250;product=BolA family protein;protein_id=WP_006249691.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 35686 36966 . + . ID=gene-JYJ20_RS06255;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=JYJ20_RS06255 NZ_JAFIRP010000015.1 Protein Homology CDS 35686 36966 . + 0 ID=cds-WP_006251788.1;Parent=gene-JYJ20_RS06255;Dbxref=GenBank:WP_006251788.1;Name=WP_006251788.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251788.1;locus_tag=JYJ20_RS06255;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_006251788.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 37032 37610 . - . ID=gene-JYJ20_RS06260;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=JYJ20_RS06260 NZ_JAFIRP010000015.1 Protein Homology CDS 37032 37610 . - 0 ID=cds-WP_006249689.1;Parent=gene-JYJ20_RS06260;Dbxref=GenBank:WP_006249689.1;Name=WP_006249689.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991005.1;locus_tag=JYJ20_RS06260;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_006249689.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 37677 38204 . - . ID=gene-JYJ20_RS06265;Name=JYJ20_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06265 NZ_JAFIRP010000015.1 Protein Homology CDS 37677 38204 . - 0 ID=cds-WP_006249688.1;Parent=gene-JYJ20_RS06265;Dbxref=GenBank:WP_006249688.1;Name=WP_006249688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249688.1;locus_tag=JYJ20_RS06265;product=ACP-like domain-containing protein;protein_id=WP_006249688.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 38334 39074 . - . ID=gene-JYJ20_RS06270;Name=JYJ20_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06270 NZ_JAFIRP010000015.1 Protein Homology CDS 38334 39074 . - 0 ID=cds-WP_006249687.1;Parent=gene-JYJ20_RS06270;Dbxref=GenBank:WP_006249687.1;Name=WP_006249687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011199889.1;locus_tag=JYJ20_RS06270;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_006249687.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 39087 39527 . - . ID=gene-JYJ20_RS06275;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=JYJ20_RS06275 NZ_JAFIRP010000015.1 Protein Homology CDS 39087 39527 . - 0 ID=cds-WP_006249686.1;Parent=gene-JYJ20_RS06275;Dbxref=GenBank:WP_006249686.1;Name=WP_006249686.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249686.1;locus_tag=JYJ20_RS06275;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_006249686.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 39663 40568 . - . ID=gene-JYJ20_RS06280;Name=JYJ20_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06280 NZ_JAFIRP010000015.1 Protein Homology CDS 39663 40568 . - 0 ID=cds-WP_006253634.1;Parent=gene-JYJ20_RS06280;Dbxref=GenBank:WP_006253634.1;Name=WP_006253634.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253634.1;locus_tag=JYJ20_RS06280;product=DMT family transporter;protein_id=WP_006253634.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 40646 41482 . + . ID=gene-JYJ20_RS06285;Name=JYJ20_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06285 NZ_JAFIRP010000015.1 Protein Homology CDS 40646 41482 . + 0 ID=cds-WP_006249684.1;Parent=gene-JYJ20_RS06285;Dbxref=GenBank:WP_006249684.1;Name=WP_006249684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249684.1;locus_tag=JYJ20_RS06285;product=DUF72 domain-containing protein;protein_id=WP_006249684.1;transl_table=11 NZ_JAFIRP010000015.1 RefSeq gene 41557 42437 . - . ID=gene-JYJ20_RS06290;Name=JYJ20_RS06290;end_range=42437,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06290;partial=true NZ_JAFIRP010000015.1 Protein Homology CDS 41557 42437 . - 2 ID=cds-WP_209026080.1;Parent=gene-JYJ20_RS06290;Dbxref=GenBank:WP_209026080.1;Name=WP_209026080.1;Ontology_term=GO:0015474,GO:0016020;end_range=42437,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=autotransporter activity|0015474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484421.1;locus_tag=JYJ20_RS06290;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_209026080.1;transl_table=11 ##sequence-region NZ_JAFIRP010000016.1 1 76244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000016.1 RefSeq region 1 76244 . + . ID=NZ_JAFIRP010000016.1:1..76244;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000016.1 RefSeq gene 66 650 . - . ID=gene-JYJ20_RS06295;Name=JYJ20_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06295 NZ_JAFIRP010000016.1 Protein Homology CDS 66 650 . - 0 ID=cds-WP_006249759.1;Parent=gene-JYJ20_RS06295;Dbxref=GenBank:WP_006249759.1;Name=WP_006249759.1;Ontology_term=GO:0030091,GO:0009055,GO:0010181,GO:0016679,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors|0016679||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249759.1;locus_tag=JYJ20_RS06295;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_006249759.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 650 1603 . - . ID=gene-JYJ20_RS06300;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=JYJ20_RS06300 NZ_JAFIRP010000016.1 Protein Homology CDS 650 1603 . - 0 ID=cds-WP_006249758.1;Parent=gene-JYJ20_RS06300;Dbxref=GenBank:WP_006249758.1;Name=WP_006249758.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011609172.1;locus_tag=JYJ20_RS06300;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_006249758.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 1712 2278 . + . ID=gene-JYJ20_RS06305;Name=JYJ20_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06305 NZ_JAFIRP010000016.1 Protein Homology CDS 1712 2278 . + 0 ID=cds-WP_006249757.1;Parent=gene-JYJ20_RS06305;Dbxref=GenBank:WP_006249757.1;Name=WP_006249757.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249757.1;locus_tag=JYJ20_RS06305;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_006249757.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 2275 2460 . + . ID=gene-JYJ20_RS06310;Name=JYJ20_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06310 NZ_JAFIRP010000016.1 Protein Homology CDS 2275 2460 . + 0 ID=cds-WP_006249756.1;Parent=gene-JYJ20_RS06310;Dbxref=GenBank:WP_006249756.1;Name=WP_006249756.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:NF024881.7;locus_tag=JYJ20_RS06310;product=zf-HC2 domain-containing protein;protein_id=WP_006249756.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 2490 2774 . + . ID=gene-JYJ20_RS06315;Name=JYJ20_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06315 NZ_JAFIRP010000016.1 Protein Homology CDS 2490 2774 . + 0 ID=cds-WP_006249755.1;Parent=gene-JYJ20_RS06315;Dbxref=GenBank:WP_006249755.1;Name=WP_006249755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249755.1;locus_tag=JYJ20_RS06315;product=hypothetical protein;protein_id=WP_006249755.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 2878 3921 . + . ID=gene-JYJ20_RS06320;Name=JYJ20_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06320 NZ_JAFIRP010000016.1 Protein Homology CDS 2878 3921 . + 0 ID=cds-WP_006249754.1;Parent=gene-JYJ20_RS06320;Dbxref=GenBank:WP_006249754.1;Name=WP_006249754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249754.1;locus_tag=JYJ20_RS06320;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_006249754.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 4161 5267 . + . ID=gene-JYJ20_RS06325;Name=JYJ20_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06325 NZ_JAFIRP010000016.1 Protein Homology CDS 4161 5267 . + 0 ID=cds-WP_006249753.1;Parent=gene-JYJ20_RS06325;Dbxref=GenBank:WP_006249753.1;Name=WP_006249753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005647785.1;locus_tag=JYJ20_RS06325;product=transglutaminase-like domain-containing protein;protein_id=WP_006249753.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 5242 5610 . + . ID=gene-JYJ20_RS06330;Name=JYJ20_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06330 NZ_JAFIRP010000016.1 Protein Homology CDS 5242 5610 . + 0 ID=cds-WP_006249752.1;Parent=gene-JYJ20_RS06330;Dbxref=GenBank:WP_006249752.1;Name=WP_006249752.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249752.1;locus_tag=JYJ20_RS06330;product=mercuric transporter MerT family protein;protein_id=WP_006249752.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 5612 5920 . + . ID=gene-JYJ20_RS06335;Name=JYJ20_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06335 NZ_JAFIRP010000016.1 Protein Homology CDS 5612 5920 . + 0 ID=cds-WP_006249751.1;Parent=gene-JYJ20_RS06335;Dbxref=GenBank:WP_006249751.1;Name=WP_006249751.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250841.1;locus_tag=JYJ20_RS06335;product=heavy-metal-associated domain-containing protein;protein_id=WP_006249751.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 6158 6712 . + . ID=gene-JYJ20_RS06340;Name=srlA;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=JYJ20_RS06340 NZ_JAFIRP010000016.1 Protein Homology CDS 6158 6712 . + 0 ID=cds-WP_006250840.1;Parent=gene-JYJ20_RS06340;Dbxref=GenBank:WP_006250840.1;Name=WP_006250840.1;Ontology_term=GO:0009401,GO:0015795;gbkey=CDS;gene=srlA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005725059.1;locus_tag=JYJ20_RS06340;product=PTS glucitol/sorbitol transporter subunit IIC;protein_id=WP_006250840.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 6743 7744 . + . ID=gene-JYJ20_RS06345;Name=srlE;gbkey=Gene;gene=srlE;gene_biotype=protein_coding;locus_tag=JYJ20_RS06345 NZ_JAFIRP010000016.1 Protein Homology CDS 6743 7744 . + 0 ID=cds-WP_209026081.1;Parent=gene-JYJ20_RS06345;Dbxref=GenBank:WP_209026081.1;Name=WP_209026081.1;Ontology_term=GO:0009401,GO:0015795,GO:0008982,GO:0016301;gbkey=CDS;gene=srlE;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,kinase activity|0016301||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,sorbitol transmembrane transport|0015795||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249818.1;locus_tag=JYJ20_RS06345;product=PTS glucitol/sorbitol transporter subunit IIB;protein_id=WP_209026081.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 7822 8187 . + . ID=gene-JYJ20_RS06350;Name=srlB;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;gene_synonym=gutB;locus_tag=JYJ20_RS06350 NZ_JAFIRP010000016.1 Protein Homology CDS 7822 8187 . + 0 ID=cds-WP_006249819.1;Parent=gene-JYJ20_RS06350;Dbxref=GenBank:WP_006249819.1;Name=WP_006249819.1;gbkey=CDS;gene=srlB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340271.1;locus_tag=JYJ20_RS06350;product=PTS glucitol/sorbitol transporter subunit IIA;protein_id=WP_006249819.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 8235 9023 . + . ID=gene-JYJ20_RS06355;Name=srlD;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=JYJ20_RS06355 NZ_JAFIRP010000016.1 Protein Homology CDS 8235 9023 . + 0 ID=cds-WP_006249820.1;Parent=gene-JYJ20_RS06355;Dbxref=GenBank:WP_006249820.1;Name=WP_006249820.1;Ontology_term=GO:0016491;gbkey=CDS;gene=srlD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250837.1;locus_tag=JYJ20_RS06355;product=sorbitol-6-phosphate dehydrogenase;protein_id=WP_006249820.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 9192 9572 . + . ID=gene-JYJ20_RS06360;Name=gutM;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=JYJ20_RS06360 NZ_JAFIRP010000016.1 Protein Homology CDS 9192 9572 . + 0 ID=cds-WP_006249821.1;Parent=gene-JYJ20_RS06360;Dbxref=GenBank:WP_006249821.1;Name=WP_006249821.1;gbkey=CDS;gene=gutM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249821.1;locus_tag=JYJ20_RS06360;product=transcriptional regulator GutM;protein_id=WP_006249821.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 9635 10282 . + . ID=gene-JYJ20_RS06365;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=JYJ20_RS06365 NZ_JAFIRP010000016.1 Protein Homology CDS 9635 10282 . + 0 ID=cds-WP_006249822.1;Parent=gene-JYJ20_RS06365;Dbxref=GenBank:WP_006249822.1;Name=WP_006249822.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249822.1;locus_tag=JYJ20_RS06365;product=hexitol phosphatase HxpB;protein_id=WP_006249822.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 10325 11122 . + . ID=gene-JYJ20_RS06370;Name=srlR;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;gene_synonym=gutR;locus_tag=JYJ20_RS06370 NZ_JAFIRP010000016.1 Protein Homology CDS 10325 11122 . + 0 ID=cds-WP_006249823.1;Parent=gene-JYJ20_RS06370;Dbxref=GenBank:WP_006249823.1;Name=WP_006249823.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=srlR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249823.1;locus_tag=JYJ20_RS06370;product=glucitol operon DNA-binding transcriptional repressor SrlR;protein_id=WP_006249823.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 11133 12068 . + . ID=gene-JYJ20_RS06375;Name=JYJ20_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06375 NZ_JAFIRP010000016.1 Protein Homology CDS 11133 12068 . + 0 ID=cds-WP_006249824.1;Parent=gene-JYJ20_RS06375;Dbxref=GenBank:WP_006249824.1;Name=WP_006249824.1;Ontology_term=GO:0005975,GO:0016853,GO:0046872,GO:0097367;gbkey=CDS;go_function=isomerase activity|0016853||IEA,metal ion binding|0046872||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596397.1;locus_tag=JYJ20_RS06375;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=WP_006249824.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 12112 12408 . - . ID=gene-JYJ20_RS12140;Name=JYJ20_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12140 NZ_JAFIRP010000016.1 Protein Homology CDS 12112 12408 . - 0 ID=cds-WP_226317939.1;Parent=gene-JYJ20_RS12140;Dbxref=GenBank:WP_226317939.1;Name=WP_226317939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005646171.1;locus_tag=JYJ20_RS12140;product=transposase;protein_id=WP_226317939.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 12402 12662 . - . ID=gene-JYJ20_RS12145;Name=JYJ20_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12145 NZ_JAFIRP010000016.1 Protein Homology CDS 12402 12662 . - 0 ID=cds-WP_015484491.1;Parent=gene-JYJ20_RS12145;Dbxref=GenBank:WP_015484491.1;Name=WP_015484491.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484491.1;locus_tag=JYJ20_RS12145;product=transposase;protein_id=WP_015484491.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 12964 14823 . + . ID=gene-JYJ20_RS06385;Name=JYJ20_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06385 NZ_JAFIRP010000016.1 Protein Homology CDS 12964 14823 . + 0 ID=cds-WP_006249825.1;Parent=gene-JYJ20_RS06385;Dbxref=GenBank:WP_006249825.1;Name=WP_006249825.1;Ontology_term=GO:0009401,GO:0022872;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-mannitol phosphotransferase system transmembrane transporter activity|0022872||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250834.1;locus_tag=JYJ20_RS06385;product=PTS mannitol transporter subunit IICBA;protein_id=WP_006249825.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 14927 16066 . + . ID=gene-JYJ20_RS06390;Name=JYJ20_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06390 NZ_JAFIRP010000016.1 Protein Homology CDS 14927 16066 . + 0 ID=cds-WP_006249827.1;Parent=gene-JYJ20_RS06390;Dbxref=GenBank:WP_006249827.1;Name=WP_006249827.1;Ontology_term=GO:0019594,GO:0008926;gbkey=CDS;go_function=mannitol-1-phosphate 5-dehydrogenase activity|0008926||IEA;go_process=mannitol metabolic process|0019594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249827.1;locus_tag=JYJ20_RS06390;product=mannitol-1-phosphate 5-dehydrogenase;protein_id=WP_006249827.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 16078 16593 . + . ID=gene-JYJ20_RS06395;Name=JYJ20_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06395 NZ_JAFIRP010000016.1 Protein Homology CDS 16078 16593 . + 0 ID=cds-WP_006250833.1;Parent=gene-JYJ20_RS06395;Dbxref=GenBank:WP_006250833.1;Name=WP_006250833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250833.1;locus_tag=JYJ20_RS06395;product=MltR family transcriptional regulator;protein_id=WP_006250833.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 16733 18598 . + . ID=gene-JYJ20_RS06400;Name=JYJ20_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06400 NZ_JAFIRP010000016.1 Protein Homology CDS 16733 18598 . + 0 ID=cds-WP_006250832.1;Parent=gene-JYJ20_RS06400;Dbxref=GenBank:WP_006250832.1;Name=WP_006250832.1;Ontology_term=GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263322.1;locus_tag=JYJ20_RS06400;product=SLC13 family permease;protein_id=WP_006250832.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 18747 19874 . - . ID=gene-JYJ20_RS06405;Name=JYJ20_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06405 NZ_JAFIRP010000016.1 Protein Homology CDS 18747 19874 . - 0 ID=cds-WP_006249611.1;Parent=gene-JYJ20_RS06405;Dbxref=GenBank:WP_006249611.1;Name=WP_006249611.1;Ontology_term=GO:0008643,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005624872.1;locus_tag=JYJ20_RS06405;product=sugar ABC transporter permease;protein_id=WP_006249611.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 19878 21392 . - . ID=gene-JYJ20_RS06410;Name=xylG;gbkey=Gene;gene=xylG;gene_biotype=protein_coding;locus_tag=JYJ20_RS06410 NZ_JAFIRP010000016.1 Protein Homology CDS 19878 21392 . - 0 ID=cds-WP_209026082.1;Parent=gene-JYJ20_RS06410;Dbxref=GenBank:WP_209026082.1;Name=WP_209026082.1;Ontology_term=GO:0015753,GO:0005524,GO:0015614,GO:0016020;gbkey=CDS;gene=xylG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-xylose transporter activity|0015614||IEA;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011608742.1;locus_tag=JYJ20_RS06410;product=D-xylose ABC transporter ATP-binding protein;protein_id=WP_209026082.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 21459 22460 . - . ID=gene-JYJ20_RS06415;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=JYJ20_RS06415 NZ_JAFIRP010000016.1 Protein Homology CDS 21459 22460 . - 0 ID=cds-WP_006250829.1;Parent=gene-JYJ20_RS06415;Dbxref=GenBank:WP_006250829.1;Name=WP_006250829.1;Ontology_term=GO:0015753;gbkey=CDS;gene=xylF;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005576719.1;locus_tag=JYJ20_RS06415;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_006250829.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 22702 24021 . + . ID=gene-JYJ20_RS06420;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=JYJ20_RS06420 NZ_JAFIRP010000016.1 Protein Homology CDS 22702 24021 . + 0 ID=cds-WP_006249615.1;Parent=gene-JYJ20_RS06420;Dbxref=GenBank:WP_006249615.1;Name=WP_006249615.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012072255.1;locus_tag=JYJ20_RS06420;product=xylose isomerase;protein_id=WP_006249615.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 24174 25619 . + . ID=gene-JYJ20_RS06425;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=JYJ20_RS06425 NZ_JAFIRP010000016.1 Protein Homology CDS 24174 25619 . + 0 ID=cds-WP_006250827.1;Parent=gene-JYJ20_RS06425;Dbxref=GenBank:WP_006250827.1;Name=WP_006250827.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992297.1;locus_tag=JYJ20_RS06425;product=xylulokinase;protein_id=WP_006250827.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 25682 26005 . - . ID=gene-JYJ20_RS06430;Name=JYJ20_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06430 NZ_JAFIRP010000016.1 Protein Homology CDS 25682 26005 . - 0 ID=cds-WP_006250826.1;Parent=gene-JYJ20_RS06430;Dbxref=GenBank:WP_006250826.1;Name=WP_006250826.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250826.1;locus_tag=JYJ20_RS06430;product=DMT family transporter;protein_id=WP_006250826.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 26129 26671 . + . ID=gene-JYJ20_RS06435;Name=JYJ20_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06435 NZ_JAFIRP010000016.1 Protein Homology CDS 26129 26671 . + 0 ID=cds-WP_209026083.1;Parent=gene-JYJ20_RS06435;Dbxref=GenBank:WP_209026083.1;Name=WP_209026083.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249619.1;locus_tag=JYJ20_RS06435;product=RBBP9/YdeN family alpha/beta hydrolase;protein_id=WP_209026083.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 26787 27611 . - . ID=gene-JYJ20_RS06440;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=JYJ20_RS06440 NZ_JAFIRP010000016.1 Protein Homology CDS 26787 27611 . - 0 ID=cds-WP_209026084.1;Parent=gene-JYJ20_RS06440;Dbxref=GenBank:WP_209026084.1;Name=WP_209026084.1;Ontology_term=GO:0009085,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263271.1;locus_tag=JYJ20_RS06440;product=diaminopimelate epimerase;protein_id=WP_209026084.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 27760 29082 . + . ID=gene-JYJ20_RS06445;Name=JYJ20_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06445 NZ_JAFIRP010000016.1 Protein Homology CDS 27760 29082 . + 0 ID=cds-WP_006250824.1;Parent=gene-JYJ20_RS06445;Dbxref=GenBank:WP_006250824.1;Name=WP_006250824.1;Ontology_term=GO:0015740,GO:0015556,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875241.1;locus_tag=JYJ20_RS06445;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_006250824.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 29130 29504 . - . ID=gene-JYJ20_RS06450;Name=JYJ20_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06450 NZ_JAFIRP010000016.1 Protein Homology CDS 29130 29504 . - 0 ID=cds-WP_015586980.1;Parent=gene-JYJ20_RS06450;Dbxref=GenBank:WP_015586980.1;Name=WP_015586980.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015586980.1;locus_tag=JYJ20_RS06450;product=fluoride efflux transporter FluC;protein_id=WP_015586980.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 29702 30487 . + . ID=gene-JYJ20_RS06455;Name=JYJ20_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06455 NZ_JAFIRP010000016.1 Protein Homology CDS 29702 30487 . + 0 ID=cds-WP_209026085.1;Parent=gene-JYJ20_RS06455;Dbxref=GenBank:WP_209026085.1;Name=WP_209026085.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484489.1;locus_tag=JYJ20_RS06455;product=MIP/aquaporin family protein;protein_id=WP_209026085.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 30491 32002 . + . ID=gene-JYJ20_RS06460;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=JYJ20_RS06460 NZ_JAFIRP010000016.1 Protein Homology CDS 30491 32002 . + 0 ID=cds-WP_006248030.1;Parent=gene-JYJ20_RS06460;Dbxref=GenBank:WP_006248030.1;Name=WP_006248030.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596375.1;locus_tag=JYJ20_RS06460;product=glycerol kinase GlpK;protein_id=WP_006248030.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 32154 32696 . + . ID=gene-JYJ20_RS06465;Name=JYJ20_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06465 NZ_JAFIRP010000016.1 Protein Homology CDS 32154 32696 . + 0 ID=cds-WP_006250820.1;Parent=gene-JYJ20_RS06465;Dbxref=GenBank:WP_006250820.1;Name=WP_006250820.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604820.1;locus_tag=JYJ20_RS06465;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_006250820.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 32807 33865 . - . ID=gene-JYJ20_RS06470;Name=JYJ20_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06470 NZ_JAFIRP010000016.1 Protein Homology CDS 32807 33865 . - 0 ID=cds-WP_006250819.1;Parent=gene-JYJ20_RS06470;Dbxref=GenBank:WP_006250819.1;Name=WP_006250819.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484525.1;locus_tag=JYJ20_RS06470;product=acyl-CoA dehydrogenase family protein;protein_id=WP_006250819.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 34020 34763 . - . ID=gene-JYJ20_RS06475;Name=JYJ20_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06475 NZ_JAFIRP010000016.1 Protein Homology CDS 34020 34763 . - 0 ID=cds-WP_209026086.1;Parent=gene-JYJ20_RS06475;Dbxref=GenBank:WP_209026086.1;Name=WP_209026086.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248026.1;locus_tag=JYJ20_RS06475;product=ABC transporter permease;protein_id=WP_209026086.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 34780 35946 . - . ID=gene-JYJ20_RS06480;Name=JYJ20_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06480 NZ_JAFIRP010000016.1 Protein Homology CDS 34780 35946 . - 0 ID=cds-WP_209026087.1;Parent=gene-JYJ20_RS06480;Dbxref=GenBank:WP_209026087.1;Name=WP_209026087.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250818.1;locus_tag=JYJ20_RS06480;product=ABC transporter substrate-binding protein;protein_id=WP_209026087.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 35957 36748 . - . ID=gene-JYJ20_RS06485;Name=JYJ20_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06485 NZ_JAFIRP010000016.1 Protein Homology CDS 35957 36748 . - 0 ID=cds-WP_006252562.1;Parent=gene-JYJ20_RS06485;Dbxref=GenBank:WP_006252562.1;Name=WP_006252562.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252562.1;locus_tag=JYJ20_RS06485;product=ABC transporter ATP-binding protein;protein_id=WP_006252562.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 36943 38379 . - . ID=gene-JYJ20_RS06490;Name=JYJ20_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06490 NZ_JAFIRP010000016.1 Protein Homology CDS 36943 38379 . - 0 ID=cds-WP_209026088.1;Parent=gene-JYJ20_RS06490;Dbxref=GenBank:WP_209026088.1;Name=WP_209026088.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015433038.1;locus_tag=JYJ20_RS06490;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_209026088.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 38391 40517 . - . ID=gene-JYJ20_RS06495;Name=JYJ20_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06495 NZ_JAFIRP010000016.1 Protein Homology CDS 38391 40517 . - 0 ID=cds-WP_006248024.1;Parent=gene-JYJ20_RS06495;Dbxref=GenBank:WP_006248024.1;Name=WP_006248024.1;Ontology_term=GO:0030253,GO:0005524,GO:0016020,GO:0030256;gbkey=CDS;go_component=membrane|0016020||IEA,type I protein secretion system complex|0030256||IEA;go_function=ATP binding|0005524||IEA;go_process=protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250816.1;locus_tag=JYJ20_RS06495;product=type I secretion system permease/ATPase;protein_id=WP_006248024.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 40592 43453 . - . ID=gene-JYJ20_RS06500;Name=JYJ20_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06500 NZ_JAFIRP010000016.1 Protein Homology CDS 40592 43453 . - 0 ID=cds-WP_015484526.1;Parent=gene-JYJ20_RS06500;Dbxref=GenBank:WP_015484526.1;Name=WP_015484526.1;Ontology_term=GO:0005509,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_function=calcium ion binding|0005509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248023.1;locus_tag=JYJ20_RS06500;product=RTX family hemolysin;protein_id=WP_015484526.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 43469 43972 . - . ID=gene-JYJ20_RS06505;Name=JYJ20_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06505 NZ_JAFIRP010000016.1 Protein Homology CDS 43469 43972 . - 0 ID=cds-WP_006248022.1;Parent=gene-JYJ20_RS06505;Dbxref=GenBank:WP_006248022.1;Name=WP_006248022.1;Ontology_term=GO:0009404,GO:0016746,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=acyltransferase activity|0016746||IEA;go_process=toxin metabolic process|0009404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248022.1;locus_tag=JYJ20_RS06505;product=toxin-activating lysine-acyltransferase;protein_id=WP_006248022.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 44379 45095 . + . ID=gene-JYJ20_RS06510;Name=JYJ20_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06510 NZ_JAFIRP010000016.1 Protein Homology CDS 44379 45095 . + 0 ID=cds-WP_006248021.1;Parent=gene-JYJ20_RS06510;Dbxref=GenBank:WP_006248021.1;Name=WP_006248021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248021.1;locus_tag=JYJ20_RS06510;product=arginine ABC transporter substrate-binding protein;protein_id=WP_006248021.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 45155 46033 . - . ID=gene-JYJ20_RS06515;Name=JYJ20_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06515 NZ_JAFIRP010000016.1 Protein Homology CDS 45155 46033 . - 0 ID=cds-WP_006248020.1;Parent=gene-JYJ20_RS06515;Dbxref=GenBank:WP_006248020.1;Name=WP_006248020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248020.1;locus_tag=JYJ20_RS06515;product=VirK/YbjX family protein;protein_id=WP_006248020.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 46109 47434 . - . ID=gene-JYJ20_RS06520;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=JYJ20_RS06520 NZ_JAFIRP010000016.1 Protein Homology CDS 46109 47434 . - 0 ID=cds-WP_171814968.1;Parent=gene-JYJ20_RS06520;Dbxref=GenBank:WP_171814968.1;Name=WP_171814968.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011609688.1;locus_tag=JYJ20_RS06520;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_171814968.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 47691 48212 . - . ID=gene-JYJ20_RS06525;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=JYJ20_RS06525 NZ_JAFIRP010000016.1 Protein Homology CDS 47691 48212 . - 0 ID=cds-WP_006248017.1;Parent=gene-JYJ20_RS06525;Dbxref=GenBank:WP_006248017.1;Name=WP_006248017.1;Ontology_term=GO:0030163,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945739.1;locus_tag=JYJ20_RS06525;product=ATP-dependent protease subunit HslV;protein_id=WP_006248017.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 48273 48986 . - . ID=gene-JYJ20_RS06530;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=JYJ20_RS06530 NZ_JAFIRP010000016.1 Protein Homology CDS 48273 48986 . - 0 ID=cds-WP_209026089.1;Parent=gene-JYJ20_RS06530;Dbxref=GenBank:WP_209026089.1;Name=WP_209026089.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248016.1;locus_tag=JYJ20_RS06530;product=DNA/RNA nuclease SfsA;protein_id=WP_209026089.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 49002 49871 . - . ID=gene-JYJ20_RS06535;Name=JYJ20_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06535 NZ_JAFIRP010000016.1 Protein Homology CDS 49002 49871 . - 0 ID=cds-WP_006248015.1;Parent=gene-JYJ20_RS06535;Dbxref=GenBank:WP_006248015.1;Name=WP_006248015.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250808.1;locus_tag=JYJ20_RS06535;product=DMT family transporter;protein_id=WP_006248015.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 49872 50264 . - . ID=gene-JYJ20_RS06540;Name=gloA2;gbkey=Gene;gene=gloA2;gene_biotype=protein_coding;locus_tag=JYJ20_RS06540 NZ_JAFIRP010000016.1 Protein Homology CDS 49872 50264 . - 0 ID=cds-WP_006250807.1;Parent=gene-JYJ20_RS06540;Dbxref=GenBank:WP_006250807.1;Name=WP_006250807.1;gbkey=CDS;gene=gloA2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250807.1;locus_tag=JYJ20_RS06540;product=SMU1112c/YaeR family gloxylase I-like metalloprotein;protein_id=WP_006250807.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 50348 51493 . + . ID=gene-JYJ20_RS06545;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=JYJ20_RS06545 NZ_JAFIRP010000016.1 Protein Homology CDS 50348 51493 . + 0 ID=cds-WP_006248013.1;Parent=gene-JYJ20_RS06545;Dbxref=GenBank:WP_006248013.1;Name=WP_006248013.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609167.1;locus_tag=JYJ20_RS06545;product=A/G-specific adenine glycosylase;protein_id=WP_006248013.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 51497 51766 . + . ID=gene-JYJ20_RS06550;Name=JYJ20_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06550 NZ_JAFIRP010000016.1 Protein Homology CDS 51497 51766 . + 0 ID=cds-WP_006248012.1;Parent=gene-JYJ20_RS06550;Dbxref=GenBank:WP_006248012.1;Name=WP_006248012.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005706474.1;locus_tag=JYJ20_RS06550;product=oxidative damage protection protein;protein_id=WP_006248012.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 51783 52874 . + . ID=gene-JYJ20_RS06555;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=JYJ20_RS06555 NZ_JAFIRP010000016.1 Protein Homology CDS 51783 52874 . + 0 ID=cds-WP_006253575.1;Parent=gene-JYJ20_RS06555;Dbxref=GenBank:WP_006253575.1;Name=WP_006253575.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599253.1;locus_tag=JYJ20_RS06555;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_006253575.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 53006 53081 . + . ID=gene-JYJ20_RS06560;Name=JYJ20_RS06560;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS06560 NZ_JAFIRP010000016.1 tRNAscan-SE tRNA 53006 53081 . + . ID=rna-JYJ20_RS06560;Parent=gene-JYJ20_RS06560;anticodon=(pos:53039..53041);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS06560;product=tRNA-Phe NZ_JAFIRP010000016.1 tRNAscan-SE exon 53006 53081 . + . ID=exon-JYJ20_RS06560-1;Parent=rna-JYJ20_RS06560;anticodon=(pos:53039..53041);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS06560;product=tRNA-Phe NZ_JAFIRP010000016.1 RefSeq gene 53087 53162 . + . ID=gene-JYJ20_RS06565;Name=JYJ20_RS06565;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS06565 NZ_JAFIRP010000016.1 tRNAscan-SE tRNA 53087 53162 . + . ID=rna-JYJ20_RS06565;Parent=gene-JYJ20_RS06565;anticodon=(pos:53120..53122);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS06565;product=tRNA-Asn NZ_JAFIRP010000016.1 tRNAscan-SE exon 53087 53162 . + . ID=exon-JYJ20_RS06565-1;Parent=rna-JYJ20_RS06565;anticodon=(pos:53120..53122);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS06565;product=tRNA-Asn NZ_JAFIRP010000016.1 RefSeq gene 53333 53408 . + . ID=gene-JYJ20_RS06570;Name=JYJ20_RS06570;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS06570 NZ_JAFIRP010000016.1 tRNAscan-SE tRNA 53333 53408 . + . ID=rna-JYJ20_RS06570;Parent=gene-JYJ20_RS06570;anticodon=(pos:53366..53368);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS06570;product=tRNA-Phe NZ_JAFIRP010000016.1 tRNAscan-SE exon 53333 53408 . + . ID=exon-JYJ20_RS06570-1;Parent=rna-JYJ20_RS06570;anticodon=(pos:53366..53368);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS06570;product=tRNA-Phe NZ_JAFIRP010000016.1 RefSeq gene 53414 53489 . + . ID=gene-JYJ20_RS06575;Name=JYJ20_RS06575;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS06575 NZ_JAFIRP010000016.1 tRNAscan-SE tRNA 53414 53489 . + . ID=rna-JYJ20_RS06575;Parent=gene-JYJ20_RS06575;anticodon=(pos:53447..53449);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS06575;product=tRNA-Asn NZ_JAFIRP010000016.1 tRNAscan-SE exon 53414 53489 . + . ID=exon-JYJ20_RS06575-1;Parent=rna-JYJ20_RS06575;anticodon=(pos:53447..53449);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS06575;product=tRNA-Asn NZ_JAFIRP010000016.1 RefSeq gene 53825 55216 . + . ID=gene-JYJ20_RS06580;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=JYJ20_RS06580 NZ_JAFIRP010000016.1 Protein Homology CDS 53825 55216 . + 0 ID=cds-WP_006249958.1;Parent=gene-JYJ20_RS06580;Dbxref=GenBank:WP_006249958.1;Name=WP_006249958.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011199698.1;locus_tag=JYJ20_RS06580;product=signal recognition particle protein;protein_id=WP_006249958.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 55356 56114 . - . ID=gene-JYJ20_RS06585;Name=JYJ20_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06585 NZ_JAFIRP010000016.1 Protein Homology CDS 55356 56114 . - 0 ID=cds-WP_006249959.1;Parent=gene-JYJ20_RS06585;Dbxref=GenBank:WP_006249959.1;Name=WP_006249959.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249959.1;locus_tag=JYJ20_RS06585;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_006249959.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 56288 57193 . + . ID=gene-JYJ20_RS06590;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=JYJ20_RS06590 NZ_JAFIRP010000016.1 Protein Homology CDS 56288 57193 . + 0 ID=cds-WP_006249960.1;Parent=gene-JYJ20_RS06590;Dbxref=GenBank:WP_006249960.1;Name=WP_006249960.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249960.1;locus_tag=JYJ20_RS06590;product=L-threonate dehydrogenase;protein_id=WP_006249960.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 57195 58436 . + . ID=gene-JYJ20_RS06595;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=JYJ20_RS06595 NZ_JAFIRP010000016.1 Protein Homology CDS 57195 58436 . + 0 ID=cds-WP_006249961.1;Parent=gene-JYJ20_RS06595;Dbxref=GenBank:WP_006249961.1;Name=WP_006249961.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005754893.1;locus_tag=JYJ20_RS06595;product=3-oxo-tetronate kinase;protein_id=WP_006249961.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 58433 59065 . + . ID=gene-JYJ20_RS06600;Name=otnC;gbkey=Gene;gene=otnC;gene_biotype=protein_coding;locus_tag=JYJ20_RS06600 NZ_JAFIRP010000016.1 Protein Homology CDS 58433 59065 . + 0 ID=cds-WP_006249962.1;Parent=gene-JYJ20_RS06600;Dbxref=GenBank:WP_006249962.1;Name=WP_006249962.1;Ontology_term=GO:0005996,GO:0016829;gbkey=CDS;gene=otnC;go_function=lyase activity|0016829||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014668373.1;locus_tag=JYJ20_RS06600;product=3-oxo-tetronate 4-phosphate decarboxylase;protein_id=WP_006249962.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 59067 59843 . + . ID=gene-JYJ20_RS06605;Name=otnI;gbkey=Gene;gene=otnI;gene_biotype=protein_coding;locus_tag=JYJ20_RS06605 NZ_JAFIRP010000016.1 Protein Homology CDS 59067 59843 . + 0 ID=cds-WP_006249963.1;Parent=gene-JYJ20_RS06605;Dbxref=GenBank:WP_006249963.1;Name=WP_006249963.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;gene=otnI;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005547735.1;locus_tag=JYJ20_RS06605;product=2-oxo-tetronate isomerase;protein_id=WP_006249963.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 59896 61254 . + . ID=gene-JYJ20_RS06610;Name=JYJ20_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06610 NZ_JAFIRP010000016.1 Protein Homology CDS 59896 61254 . + 0 ID=cds-WP_006249964.1;Parent=gene-JYJ20_RS06610;Dbxref=GenBank:WP_006249964.1;Name=WP_006249964.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249964.1;locus_tag=JYJ20_RS06610;product=GntT/GntP/DsdX family permease;protein_id=WP_006249964.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 61316 62656 . + . ID=gene-JYJ20_RS06615;Name=JYJ20_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06615 NZ_JAFIRP010000016.1 Protein Homology CDS 61316 62656 . + 0 ID=cds-WP_006249965.1;Parent=gene-JYJ20_RS06615;Dbxref=GenBank:WP_006249965.1;Name=WP_006249965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249965.1;locus_tag=JYJ20_RS06615;product=carboxylesterase family protein;protein_id=WP_006249965.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 62668 63357 . + . ID=gene-JYJ20_RS06620;Name=JYJ20_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06620 NZ_JAFIRP010000016.1 Protein Homology CDS 62668 63357 . + 0 ID=cds-WP_006250798.1;Parent=gene-JYJ20_RS06620;Dbxref=GenBank:WP_006250798.1;Name=WP_006250798.1;Ontology_term=GO:0016812,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005577085.1;locus_tag=JYJ20_RS06620;product=cyclase family protein;protein_id=WP_006250798.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 63514 65331 . + . ID=gene-JYJ20_RS06625;Name=hutW;gbkey=Gene;gene=hutW;gene_biotype=protein_coding;locus_tag=JYJ20_RS06625 NZ_JAFIRP010000016.1 Protein Homology CDS 63514 65331 . + 0 ID=cds-WP_015484528.1;Parent=gene-JYJ20_RS06625;Dbxref=GenBank:WP_015484528.1;Name=WP_015484528.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;gene=hutW;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252572.1;locus_tag=JYJ20_RS06625;product=heme anaerobic degradation radical SAM methyltransferase ChuW/HutW;protein_id=WP_015484528.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 65334 65951 . + . ID=gene-JYJ20_RS06630;Name=JYJ20_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06630 NZ_JAFIRP010000016.1 Protein Homology CDS 65334 65951 . + 0 ID=cds-WP_006249968.1;Parent=gene-JYJ20_RS06630;Dbxref=GenBank:WP_006249968.1;Name=WP_006249968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249968.1;locus_tag=JYJ20_RS06630;product=NAD(P)H-binding protein;protein_id=WP_006249968.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 66035 66646 . - . ID=gene-JYJ20_RS06635;Name=JYJ20_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06635 NZ_JAFIRP010000016.1 Protein Homology CDS 66035 66646 . - 0 ID=cds-WP_006249969.1;Parent=gene-JYJ20_RS06635;Dbxref=GenBank:WP_006249969.1;Name=WP_006249969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249969.1;locus_tag=JYJ20_RS06635;product=pentahemic C cytochrome;protein_id=WP_006249969.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 66841 67749 . + . ID=gene-JYJ20_RS06640;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=JYJ20_RS06640 NZ_JAFIRP010000016.1 Protein Homology CDS 66841 67749 . + 0 ID=cds-WP_006249971.1;Parent=gene-JYJ20_RS06640;Dbxref=GenBank:WP_006249971.1;Name=WP_006249971.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017806840.1;locus_tag=JYJ20_RS06640;product=glycine--tRNA ligase subunit alpha;protein_id=WP_006249971.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 67829 68089 . + . ID=gene-JYJ20_RS06645;Name=JYJ20_RS06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06645 NZ_JAFIRP010000016.1 Protein Homology CDS 67829 68089 . + 0 ID=cds-WP_006249972.1;Parent=gene-JYJ20_RS06645;Dbxref=GenBank:WP_006249972.1;Name=WP_006249972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250794.1;locus_tag=JYJ20_RS06645;product=hypothetical protein;protein_id=WP_006249972.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 68132 69166 . + . ID=gene-JYJ20_RS06650;Name=JYJ20_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06650 NZ_JAFIRP010000016.1 Protein Homology CDS 68132 69166 . + 0 ID=cds-WP_006249973.1;Parent=gene-JYJ20_RS06650;Dbxref=GenBank:WP_006249973.1;Name=WP_006249973.1;Ontology_term=GO:0003677,GO:0004518;gbkey=CDS;go_function=DNA binding|0003677||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250793.1;locus_tag=JYJ20_RS06650;product=PDDEXK nuclease domain-containing protein;protein_id=WP_006249973.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 69544 70008 . + . ID=gene-JYJ20_RS06655;Name=JYJ20_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06655 NZ_JAFIRP010000016.1 Protein Homology CDS 69544 70008 . + 0 ID=cds-WP_006249974.1;Parent=gene-JYJ20_RS06655;Dbxref=GenBank:WP_006249974.1;Name=WP_006249974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249974.1;locus_tag=JYJ20_RS06655;product=hypothetical protein;protein_id=WP_006249974.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 70017 72083 . + . ID=gene-JYJ20_RS06660;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=JYJ20_RS06660 NZ_JAFIRP010000016.1 Protein Homology CDS 70017 72083 . + 0 ID=cds-WP_006249975.1;Parent=gene-JYJ20_RS06660;Dbxref=GenBank:WP_006249975.1;Name=WP_006249975.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005693270.1;locus_tag=JYJ20_RS06660;product=glycine--tRNA ligase subunit beta;protein_id=WP_006249975.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 72208 72516 . - . ID=gene-JYJ20_RS12150;Name=JYJ20_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12150 NZ_JAFIRP010000016.1 GeneMarkS-2+ CDS 72208 72516 . - 0 ID=cds-WP_245155389.1;Parent=gene-JYJ20_RS12150;Dbxref=GenBank:WP_245155389.1;Name=WP_245155389.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS12150;product=hypothetical protein;protein_id=WP_245155389.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 72539 73501 . - . ID=gene-JYJ20_RS06665;Name=JYJ20_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06665 NZ_JAFIRP010000016.1 GeneMarkS-2+ CDS 72539 73501 . - 0 ID=cds-WP_245155390.1;Parent=gene-JYJ20_RS06665;Dbxref=GenBank:WP_245155390.1;Name=WP_245155390.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS06665;product=amino acid permease;protein_id=WP_245155390.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 73530 74198 . - . ID=gene-JYJ20_RS06670;Name=JYJ20_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06670 NZ_JAFIRP010000016.1 Protein Homology CDS 73530 74198 . - 0 ID=cds-WP_006249978.1;Parent=gene-JYJ20_RS06670;Dbxref=GenBank:WP_006249978.1;Name=WP_006249978.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249978.1;locus_tag=JYJ20_RS06670;product=helix-turn-helix transcriptional regulator;protein_id=WP_006249978.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 74432 74722 . + . ID=gene-JYJ20_RS06675;Name=JYJ20_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06675 NZ_JAFIRP010000016.1 Protein Homology CDS 74432 74722 . + 0 ID=cds-WP_006249979.1;Parent=gene-JYJ20_RS06675;Dbxref=GenBank:WP_006249979.1;Name=WP_006249979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599371.1;locus_tag=JYJ20_RS06675;product=DUF5377 family protein;protein_id=WP_006249979.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 74789 75700 . + . ID=gene-JYJ20_RS06680;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=JYJ20_RS06680 NZ_JAFIRP010000016.1 Protein Homology CDS 74789 75700 . + 0 ID=cds-WP_006249980.1;Parent=gene-JYJ20_RS06680;Dbxref=GenBank:WP_006249980.1;Name=WP_006249980.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249980.1;locus_tag=JYJ20_RS06680;product=tyrosine recombinase XerC;protein_id=WP_006249980.1;transl_table=11 NZ_JAFIRP010000016.1 RefSeq gene 75697 76068 . - . ID=gene-JYJ20_RS06685;Name=JYJ20_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06685 NZ_JAFIRP010000016.1 Protein Homology CDS 75697 76068 . - 0 ID=cds-WP_006249981.1;Parent=gene-JYJ20_RS06685;Dbxref=GenBank:WP_006249981.1;Name=WP_006249981.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249981.1;locus_tag=JYJ20_RS06685;product=YbaN family protein;protein_id=WP_006249981.1;transl_table=11 ##sequence-region NZ_JAFIRP010000017.1 1 13161 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000017.1 RefSeq region 1 13161 . + . ID=NZ_JAFIRP010000017.1:1..13161;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000017.1 RefSeq gene 149 589 . + . ID=gene-JYJ20_RS06690;Name=JYJ20_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06690 NZ_JAFIRP010000017.1 Protein Homology CDS 149 589 . + 0 ID=cds-WP_006252769.1;Parent=gene-JYJ20_RS06690;Dbxref=GenBank:WP_006252769.1;Name=WP_006252769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252769.1;locus_tag=JYJ20_RS06690;product=HvfX family Cu-binding RiPP maturation protein;protein_id=WP_006252769.1;transl_table=11 NZ_JAFIRP010000017.1 RefSeq gene 615 902 . + . ID=gene-JYJ20_RS06695;Name=hvfA;gbkey=Gene;gene=hvfA;gene_biotype=protein_coding;locus_tag=JYJ20_RS06695 NZ_JAFIRP010000017.1 Protein Homology CDS 615 902 . + 0 ID=cds-WP_006248065.1;Parent=gene-JYJ20_RS06695;Dbxref=GenBank:WP_006248065.1;Name=WP_006248065.1;Ontology_term=GO:0005507;gbkey=CDS;gene=hvfA;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252419.1;locus_tag=JYJ20_RS06695;product=oxazolone/thioamide-modified RiPP metallophore HvfA;protein_id=WP_006248065.1;transl_table=11 NZ_JAFIRP010000017.1 RefSeq gene 1003 1926 . + . ID=gene-JYJ20_RS06700;Name=JYJ20_RS06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06700 NZ_JAFIRP010000017.1 Protein Homology CDS 1003 1926 . + 0 ID=cds-WP_006248064.1;Parent=gene-JYJ20_RS06700;Dbxref=GenBank:WP_006248064.1;Name=WP_006248064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248064.1;locus_tag=JYJ20_RS06700;product=HvfB family MNIO-type RiPP peptide maturase;protein_id=WP_006248064.1;transl_table=11 NZ_JAFIRP010000017.1 RefSeq gene 1916 2656 . + . ID=gene-JYJ20_RS06705;Name=JYJ20_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06705 NZ_JAFIRP010000017.1 Protein Homology CDS 1916 2656 . + 0 ID=cds-WP_006248063.1;Parent=gene-JYJ20_RS06705;Dbxref=GenBank:WP_006248063.1;Name=WP_006248063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252417.1;locus_tag=JYJ20_RS06705;product=HvfC family RiPP maturation protein;protein_id=WP_006248063.1;transl_table=11 NZ_JAFIRP010000017.1 RefSeq pseudogene 2875 3456 . + . ID=gene-JYJ20_RS06710;Name=JYJ20_RS06710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS06710;pseudo=true NZ_JAFIRP010000017.1 Protein Homology CDS 2875 3456 . + 0 ID=cds-JYJ20_RS06710;Parent=gene-JYJ20_RS06710;Note=internal stop;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252416.1;locus_tag=JYJ20_RS06710;product=sigma-70 family RNA polymerase sigma factor;pseudo=true;transl_table=11 NZ_JAFIRP010000017.1 RefSeq gene 3457 3627 . + . ID=gene-JYJ20_RS06715;Name=JYJ20_RS06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06715 NZ_JAFIRP010000017.1 Protein Homology CDS 3457 3627 . + 0 ID=cds-WP_006248062.1;Parent=gene-JYJ20_RS06715;Dbxref=GenBank:WP_006248062.1;Name=WP_006248062.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252415.1;locus_tag=JYJ20_RS06715;product=zf-HC2 domain-containing protein;protein_id=WP_006248062.1;transl_table=11 NZ_JAFIRP010000017.1 RefSeq pseudogene 3676 4596 . - . ID=gene-JYJ20_RS06720;Name=JYJ20_RS06720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS06720;pseudo=true NZ_JAFIRP010000017.1 Protein Homology CDS 3676 4596 . - 0 ID=cds-JYJ20_RS06720;Parent=gene-JYJ20_RS06720;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014218.7;locus_tag=JYJ20_RS06720;product=NCS1 family transporter;pseudo=true;transl_table=11 NZ_JAFIRP010000017.1 RefSeq gene 4769 7408 . + . ID=gene-JYJ20_RS06725;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=JYJ20_RS06725 NZ_JAFIRP010000017.1 Protein Homology CDS 4769 7408 . + 0 ID=cds-WP_006248061.1;Parent=gene-JYJ20_RS06725;Dbxref=GenBank:WP_006248061.1;Name=WP_006248061.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011609148.1;locus_tag=JYJ20_RS06725;product=phosphoenolpyruvate carboxylase;protein_id=WP_006248061.1;transl_table=11 NZ_JAFIRP010000017.1 RefSeq gene 7550 9883 . - . ID=gene-JYJ20_RS06730;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=JYJ20_RS06730 NZ_JAFIRP010000017.1 Protein Homology CDS 7550 9883 . - 0 ID=cds-WP_209026090.1;Parent=gene-JYJ20_RS06730;Dbxref=GenBank:WP_209026090.1;Name=WP_209026090.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617440.1;locus_tag=JYJ20_RS06730;product=LPS assembly protein LptD;protein_id=WP_209026090.1;transl_table=11 NZ_JAFIRP010000017.1 RefSeq gene 9957 11324 . - . ID=gene-JYJ20_RS06735;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=JYJ20_RS06735 NZ_JAFIRP010000017.1 Protein Homology CDS 9957 11324 . - 0 ID=cds-WP_006248058.1;Parent=gene-JYJ20_RS06735;Dbxref=GenBank:WP_006248058.1;Name=WP_006248058.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651795.1;locus_tag=JYJ20_RS06735;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_006248058.1;transl_table=11 NZ_JAFIRP010000017.1 RefSeq gene 11324 11791 . - . ID=gene-JYJ20_RS06740;Name=JYJ20_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06740 NZ_JAFIRP010000017.1 Protein Homology CDS 11324 11791 . - 0 ID=cds-WP_006248057.1;Parent=gene-JYJ20_RS06740;Dbxref=GenBank:WP_006248057.1;Name=WP_006248057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248057.1;locus_tag=JYJ20_RS06740;product=DUF2489 domain-containing protein;protein_id=WP_006248057.1;transl_table=11 NZ_JAFIRP010000017.1 RefSeq gene 11805 12392 . - . ID=gene-JYJ20_RS06745;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=JYJ20_RS06745 NZ_JAFIRP010000017.1 Protein Homology CDS 11805 12392 . - 0 ID=cds-WP_006248056.1;Parent=gene-JYJ20_RS06745;Dbxref=GenBank:WP_006248056.1;Name=WP_006248056.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608169.1;locus_tag=JYJ20_RS06745;product=Der GTPase-activating protein YihI;protein_id=WP_006248056.1;transl_table=11 NZ_JAFIRP010000017.1 RefSeq gene 12481 12858 . - . ID=gene-JYJ20_RS06750;Name=JYJ20_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06750 NZ_JAFIRP010000017.1 Protein Homology CDS 12481 12858 . - 0 ID=cds-WP_006248055.1;Parent=gene-JYJ20_RS06750;Dbxref=GenBank:WP_006248055.1;Name=WP_006248055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875251.1;locus_tag=JYJ20_RS06750;product=YacL family protein;protein_id=WP_006248055.1;transl_table=11 ##sequence-region NZ_JAFIRP010000018.1 1 8846 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000018.1 RefSeq region 1 8846 . + . ID=NZ_JAFIRP010000018.1:1..8846;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000018.1 RefSeq gene 30 323 . - . ID=gene-JYJ20_RS06755;Name=JYJ20_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06755 NZ_JAFIRP010000018.1 Protein Homology CDS 30 323 . - 0 ID=cds-WP_006252261.1;Parent=gene-JYJ20_RS06755;Dbxref=GenBank:WP_006252261.1;Name=WP_006252261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598606.1;locus_tag=JYJ20_RS06755;product=YfcZ/YiiS family protein;protein_id=WP_006252261.1;transl_table=11 NZ_JAFIRP010000018.1 RefSeq gene 325 1365 . - . ID=gene-JYJ20_RS06760;Name=JYJ20_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06760 NZ_JAFIRP010000018.1 Protein Homology CDS 325 1365 . - 0 ID=cds-WP_006252260.1;Parent=gene-JYJ20_RS06760;Dbxref=GenBank:WP_006252260.1;Name=WP_006252260.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252260.1;locus_tag=JYJ20_RS06760;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_006252260.1;transl_table=11 NZ_JAFIRP010000018.1 RefSeq gene 1449 2087 . - . ID=gene-JYJ20_RS06765;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=JYJ20_RS06765 NZ_JAFIRP010000018.1 Protein Homology CDS 1449 2087 . - 0 ID=cds-WP_006248321.1;Parent=gene-JYJ20_RS06765;Dbxref=GenBank:WP_006248321.1;Name=WP_006248321.1;Ontology_term=GO:0015036;gbkey=CDS;gene=dsbA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602749.1;locus_tag=JYJ20_RS06765;product=thiol:disulfide interchange protein DsbA;protein_id=WP_006248321.1;transl_table=11 NZ_JAFIRP010000018.1 RefSeq gene 2151 2420 . - . ID=gene-JYJ20_RS06770;Name=JYJ20_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06770 NZ_JAFIRP010000018.1 Protein Homology CDS 2151 2420 . - 0 ID=cds-WP_006248320.1;Parent=gene-JYJ20_RS06770;Dbxref=GenBank:WP_006248320.1;Name=WP_006248320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599524.1;locus_tag=JYJ20_RS06770;product=YihD family protein;protein_id=WP_006248320.1;transl_table=11 NZ_JAFIRP010000018.1 RefSeq gene 2507 3601 . + . ID=gene-JYJ20_RS06775;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=JYJ20_RS06775 NZ_JAFIRP010000018.1 Protein Homology CDS 2507 3601 . + 0 ID=cds-WP_006248319.1;Parent=gene-JYJ20_RS06775;Dbxref=GenBank:WP_006248319.1;Name=WP_006248319.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248319.1;locus_tag=JYJ20_RS06775;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_006248319.1;transl_table=11 NZ_JAFIRP010000018.1 RefSeq gene 3656 7852 . - . ID=gene-JYJ20_RS06780;Name=JYJ20_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06780 NZ_JAFIRP010000018.1 Protein Homology CDS 3656 7852 . - 0 ID=cds-WP_006252259.1;Parent=gene-JYJ20_RS06780;Dbxref=GenBank:WP_006252259.1;Name=WP_006252259.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252259.1;locus_tag=JYJ20_RS06780;product=S6 family peptidase;protein_id=WP_006252259.1;transl_table=11 NZ_JAFIRP010000018.1 RefSeq gene 8001 8774 . + . ID=gene-JYJ20_RS06785;Name=JYJ20_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06785 NZ_JAFIRP010000018.1 Protein Homology CDS 8001 8774 . + 0 ID=cds-WP_006252258.1;Parent=gene-JYJ20_RS06785;Dbxref=GenBank:WP_006252258.1;Name=WP_006252258.1;Ontology_term=GO:0005975,GO:0030246,GO:0047938;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA,glucose-6-phosphate 1-epimerase activity|0047938||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252258.1;locus_tag=JYJ20_RS06785;product=D-hexose-6-phosphate mutarotase;protein_id=WP_006252258.1;transl_table=11 ##sequence-region NZ_JAFIRP010000019.1 1 206556 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000019.1 RefSeq region 1 206556 . + . ID=NZ_JAFIRP010000019.1:1..206556;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000019.1 RefSeq gene 271 1095 . + . ID=gene-JYJ20_RS06790;Name=JYJ20_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06790 NZ_JAFIRP010000019.1 Protein Homology CDS 271 1095 . + 0 ID=cds-WP_061887243.1;Parent=gene-JYJ20_RS06790;Dbxref=GenBank:WP_061887243.1;Name=WP_061887243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253729.1;locus_tag=JYJ20_RS06790;product=DUF5718 family protein;protein_id=WP_061887243.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 1229 2053 . + . ID=gene-JYJ20_RS06795;Name=JYJ20_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06795 NZ_JAFIRP010000019.1 Protein Homology CDS 1229 2053 . + 0 ID=cds-WP_006253728.1;Parent=gene-JYJ20_RS06795;Dbxref=GenBank:WP_006253728.1;Name=WP_006253728.1;Ontology_term=GO:0006281,GO:0006310,GO:0003910,GO:0005524;gbkey=CDS;go_function=DNA ligase (ATP) activity|0003910||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253728.1;locus_tag=JYJ20_RS06795;product=DNA ligase;protein_id=WP_006253728.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 2147 2794 . + . ID=gene-JYJ20_RS06800;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=JYJ20_RS06800 NZ_JAFIRP010000019.1 Protein Homology CDS 2147 2794 . + 0 ID=cds-WP_006253727.1;Parent=gene-JYJ20_RS06800;Dbxref=GenBank:WP_006253727.1;Name=WP_006253727.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253727.1;locus_tag=JYJ20_RS06800;product=5-oxoprolinase subunit PxpB;protein_id=WP_006253727.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 2791 3720 . + . ID=gene-JYJ20_RS06805;Name=JYJ20_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06805 NZ_JAFIRP010000019.1 Protein Homology CDS 2791 3720 . + 0 ID=cds-WP_061887244.1;Parent=gene-JYJ20_RS06805;Dbxref=GenBank:WP_061887244.1;Name=WP_061887244.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250478.1;locus_tag=JYJ20_RS06805;product=5-oxoprolinase subunit C family protein;protein_id=WP_061887244.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 3707 4444 . + . ID=gene-JYJ20_RS06810;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=JYJ20_RS06810 NZ_JAFIRP010000019.1 Protein Homology CDS 3707 4444 . + 0 ID=cds-WP_006250127.1;Parent=gene-JYJ20_RS06810;Dbxref=GenBank:WP_006250127.1;Name=WP_006250127.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250127.1;locus_tag=JYJ20_RS06810;product=5-oxoprolinase subunit PxpA;protein_id=WP_006250127.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 4719 5906 . + . ID=gene-JYJ20_RS06815;Name=JYJ20_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06815 NZ_JAFIRP010000019.1 Protein Homology CDS 4719 5906 . + 0 ID=cds-WP_006253726.1;Parent=gene-JYJ20_RS06815;Dbxref=GenBank:WP_006253726.1;Name=WP_006253726.1;Ontology_term=GO:0030001,GO:0046872,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA,metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250476.1;locus_tag=JYJ20_RS06815;product=NRAMP family divalent metal transporter;protein_id=WP_006253726.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 6096 6350 . + . ID=gene-JYJ20_RS06820;Name=JYJ20_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06820 NZ_JAFIRP010000019.1 Protein Homology CDS 6096 6350 . + 0 ID=cds-WP_006250475.1;Parent=gene-JYJ20_RS06820;Dbxref=GenBank:WP_006250475.1;Name=WP_006250475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250475.1;locus_tag=JYJ20_RS06820;product=oxaloacetate decarboxylase subunit gamma;protein_id=WP_006250475.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 6390 8216 . + . ID=gene-JYJ20_RS06825;Name=oadA;gbkey=Gene;gene=oadA;gene_biotype=protein_coding;locus_tag=JYJ20_RS06825 NZ_JAFIRP010000019.1 Protein Homology CDS 6390 8216 . + 0 ID=cds-WP_209026091.1;Parent=gene-JYJ20_RS06825;Dbxref=GenBank:WP_209026091.1;Name=WP_209026091.1;Ontology_term=GO:0006814,GO:0008948,GO:0015081;gbkey=CDS;gene=oadA;go_function=oxaloacetate decarboxylase activity|0008948||IEA,sodium ion transmembrane transporter activity|0015081||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608604.1;locus_tag=JYJ20_RS06825;product=sodium-extruding oxaloacetate decarboxylase subunit alpha;protein_id=WP_209026091.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 8226 9530 . + . ID=gene-JYJ20_RS06830;Name=JYJ20_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06830 NZ_JAFIRP010000019.1 Protein Homology CDS 8226 9530 . + 0 ID=cds-WP_061887245.1;Parent=gene-JYJ20_RS06830;Dbxref=GenBank:WP_061887245.1;Name=WP_061887245.1;Ontology_term=GO:0006814,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605232.1;locus_tag=JYJ20_RS06830;product=sodium ion-translocating decarboxylase subunit beta;protein_id=WP_061887245.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 9892 11082 . + . ID=gene-JYJ20_RS06835;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=JYJ20_RS06835 NZ_JAFIRP010000019.1 Protein Homology CDS 9892 11082 . + 0 ID=cds-WP_209026092.1;Parent=gene-JYJ20_RS06835;Dbxref=GenBank:WP_209026092.1;Name=WP_209026092.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944663.1;locus_tag=JYJ20_RS06835;product=tyrosine--tRNA ligase;protein_id=WP_209026092.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 11161 11475 . - . ID=gene-JYJ20_RS06840;Name=JYJ20_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06840 NZ_JAFIRP010000019.1 Protein Homology CDS 11161 11475 . - 0 ID=cds-WP_006250473.1;Parent=gene-JYJ20_RS06840;Dbxref=GenBank:WP_006250473.1;Name=WP_006250473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652611.1;locus_tag=JYJ20_RS06840;product=DUF2322 family protein;protein_id=WP_006250473.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 11557 12699 . - . ID=gene-JYJ20_RS06845;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=JYJ20_RS06845 NZ_JAFIRP010000019.1 Protein Homology CDS 11557 12699 . - 0 ID=cds-WP_006250472.1;Parent=gene-JYJ20_RS06845;Dbxref=GenBank:WP_006250472.1;Name=WP_006250472.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250472.1;locus_tag=JYJ20_RS06845;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_006250472.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 12780 13574 . - . ID=gene-JYJ20_RS06850;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=JYJ20_RS06850 NZ_JAFIRP010000019.1 Protein Homology CDS 12780 13574 . - 0 ID=cds-WP_006250130.1;Parent=gene-JYJ20_RS06850;Dbxref=GenBank:WP_006250130.1;Name=WP_006250130.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250130.1;locus_tag=JYJ20_RS06850;product=glucosamine-6-phosphate deaminase;protein_id=WP_006250130.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 13817 14635 . + . ID=gene-JYJ20_RS06855;Name=JYJ20_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06855 NZ_JAFIRP010000019.1 Protein Homology CDS 13817 14635 . + 0 ID=cds-WP_006253724.1;Parent=gene-JYJ20_RS06855;Dbxref=GenBank:WP_006253724.1;Name=WP_006253724.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253724.1;locus_tag=JYJ20_RS06855;product=BRO-N domain-containing protein;protein_id=WP_006253724.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 14729 15208 . - . ID=gene-JYJ20_RS06860;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=JYJ20_RS06860 NZ_JAFIRP010000019.1 Protein Homology CDS 14729 15208 . - 0 ID=cds-WP_209026093.1;Parent=gene-JYJ20_RS06860;Dbxref=GenBank:WP_209026093.1;Name=WP_209026093.1;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015432117.1;locus_tag=JYJ20_RS06860;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_209026093.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 15385 17544 . - . ID=gene-JYJ20_RS06865;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=JYJ20_RS06865 NZ_JAFIRP010000019.1 Protein Homology CDS 15385 17544 . - 0 ID=cds-WP_006249847.1;Parent=gene-JYJ20_RS06865;Dbxref=GenBank:WP_006249847.1;Name=WP_006249847.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249847.1;locus_tag=JYJ20_RS06865;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_006249847.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 17742 18371 . + . ID=gene-JYJ20_RS06870;Name=JYJ20_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06870 NZ_JAFIRP010000019.1 Protein Homology CDS 17742 18371 . + 0 ID=cds-WP_209026094.1;Parent=gene-JYJ20_RS06870;Dbxref=GenBank:WP_209026094.1;Name=WP_209026094.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622307.1;locus_tag=JYJ20_RS06870;product=response regulator;protein_id=WP_209026094.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 18407 19417 . - . ID=gene-JYJ20_RS06875;Name=JYJ20_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06875 NZ_JAFIRP010000019.1 Protein Homology CDS 18407 19417 . - 0 ID=cds-WP_006249850.1;Parent=gene-JYJ20_RS06875;Dbxref=GenBank:WP_006249850.1;Name=WP_006249850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249850.1;locus_tag=JYJ20_RS06875;product=substrate-binding domain-containing protein;protein_id=WP_006249850.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 19431 20360 . - . ID=gene-JYJ20_RS06880;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=JYJ20_RS06880 NZ_JAFIRP010000019.1 Protein Homology CDS 19431 20360 . - 0 ID=cds-WP_006249851.1;Parent=gene-JYJ20_RS06880;Dbxref=GenBank:WP_006249851.1;Name=WP_006249851.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250468.1;locus_tag=JYJ20_RS06880;product=ribokinase;protein_id=WP_006249851.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 20481 21359 . - . ID=gene-JYJ20_RS06885;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=JYJ20_RS06885 NZ_JAFIRP010000019.1 Protein Homology CDS 20481 21359 . - 0 ID=cds-WP_006249852.1;Parent=gene-JYJ20_RS06885;Dbxref=GenBank:WP_006249852.1;Name=WP_006249852.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006995182.1;locus_tag=JYJ20_RS06885;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_006249852.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 21382 22350 . - . ID=gene-JYJ20_RS06890;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=JYJ20_RS06890 NZ_JAFIRP010000019.1 Protein Homology CDS 21382 22350 . - 0 ID=cds-WP_020831109.1;Parent=gene-JYJ20_RS06890;Dbxref=GenBank:WP_020831109.1;Name=WP_020831109.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005753457.1;locus_tag=JYJ20_RS06890;product=ribose ABC transporter permease;protein_id=WP_020831109.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 22360 23856 . - . ID=gene-JYJ20_RS06895;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=JYJ20_RS06895 NZ_JAFIRP010000019.1 Protein Homology CDS 22360 23856 . - 0 ID=cds-WP_021280015.1;Parent=gene-JYJ20_RS06895;Dbxref=GenBank:WP_021280015.1;Name=WP_021280015.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249854.1;locus_tag=JYJ20_RS06895;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_021280015.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 23866 24285 . - . ID=gene-JYJ20_RS06900;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=JYJ20_RS06900 NZ_JAFIRP010000019.1 Protein Homology CDS 23866 24285 . - 0 ID=cds-WP_006250464.1;Parent=gene-JYJ20_RS06900;Dbxref=GenBank:WP_006250464.1;Name=WP_006250464.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005753460.1;locus_tag=JYJ20_RS06900;product=D-ribose pyranase;protein_id=WP_006250464.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 24515 24775 . + . ID=gene-JYJ20_RS06905;Name=JYJ20_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06905 NZ_JAFIRP010000019.1 Protein Homology CDS 24515 24775 . + 0 ID=cds-WP_006249318.1;Parent=gene-JYJ20_RS06905;Dbxref=GenBank:WP_006249318.1;Name=WP_006249318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014064693.1;locus_tag=JYJ20_RS06905;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_006249318.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 24807 25697 . - . ID=gene-JYJ20_RS06910;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=JYJ20_RS06910 NZ_JAFIRP010000019.1 Protein Homology CDS 24807 25697 . - 0 ID=cds-WP_061887247.1;Parent=gene-JYJ20_RS06910;Dbxref=GenBank:WP_061887247.1;Name=WP_061887247.1;Ontology_term=GO:0006400,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249317.1;locus_tag=JYJ20_RS06910;product=CAF17-like 4Fe-4S cluster assembly/insertion protein YgfZ;protein_id=WP_061887247.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 25706 26569 . - . ID=gene-JYJ20_RS06915;Name=JYJ20_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06915 NZ_JAFIRP010000019.1 Protein Homology CDS 25706 26569 . - 0 ID=cds-WP_006249316.1;Parent=gene-JYJ20_RS06915;Dbxref=GenBank:WP_006249316.1;Name=WP_006249316.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011272075.1;locus_tag=JYJ20_RS06915;product=YicC/YloC family endoribonuclease;protein_id=WP_006249316.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 26850 27566 . + . ID=gene-JYJ20_RS06920;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=JYJ20_RS06920 NZ_JAFIRP010000019.1 Protein Homology CDS 26850 27566 . + 0 ID=cds-WP_006249315.1;Parent=gene-JYJ20_RS06920;Dbxref=GenBank:WP_006249315.1;Name=WP_006249315.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250463.1;locus_tag=JYJ20_RS06920;product=ribonuclease PH;protein_id=WP_006249315.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 27790 27966 . + . ID=gene-JYJ20_RS12155;Name=JYJ20_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12155 NZ_JAFIRP010000019.1 Protein Homology CDS 27790 27966 . + 0 ID=cds-WP_006250462.1;Parent=gene-JYJ20_RS12155;Dbxref=GenBank:WP_006250462.1;Name=WP_006250462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250462.1;locus_tag=JYJ20_RS12155;product=hypothetical protein;protein_id=WP_006250462.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 28014 30089 . + . ID=gene-JYJ20_RS12405;Name=JYJ20_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12405 NZ_JAFIRP010000019.1 Protein Homology CDS 28014 30089 . + 0 ID=cds-WP_249762750.1;Parent=gene-JYJ20_RS12405;Dbxref=GenBank:WP_249762750.1;Name=WP_249762750.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012801.7;locus_tag=JYJ20_RS12405;product=TonB-dependent receptor;protein_id=WP_249762750.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 30167 30868 . - . ID=gene-JYJ20_RS06930;Name=JYJ20_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06930 NZ_JAFIRP010000019.1 Protein Homology CDS 30167 30868 . - 0 ID=cds-WP_006249314.1;Parent=gene-JYJ20_RS06930;Dbxref=GenBank:WP_006249314.1;Name=WP_006249314.1;Ontology_term=GO:0006089;gbkey=CDS;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614693.1;locus_tag=JYJ20_RS06930;product=LutC/YkgG family protein;protein_id=WP_006249314.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 30873 32282 . - . ID=gene-JYJ20_RS06935;Name=JYJ20_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06935 NZ_JAFIRP010000019.1 Protein Homology CDS 30873 32282 . - 0 ID=cds-WP_134916542.1;Parent=gene-JYJ20_RS06935;Dbxref=GenBank:WP_134916542.1;Name=WP_134916542.1;Ontology_term=GO:0006089,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249313.1;locus_tag=JYJ20_RS06935;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;protein_id=WP_134916542.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 32284 33015 . - . ID=gene-JYJ20_RS06940;Name=JYJ20_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06940 NZ_JAFIRP010000019.1 Protein Homology CDS 32284 33015 . - 0 ID=cds-WP_006249312.1;Parent=gene-JYJ20_RS06940;Dbxref=GenBank:WP_006249312.1;Name=WP_006249312.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249312.1;locus_tag=JYJ20_RS06940;product=(Fe-S)-binding protein;protein_id=WP_006249312.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 33159 34763 . - . ID=gene-JYJ20_RS06945;Name=JYJ20_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06945 NZ_JAFIRP010000019.1 Protein Homology CDS 33159 34763 . - 0 ID=cds-WP_006250460.1;Parent=gene-JYJ20_RS06945;Dbxref=GenBank:WP_006250460.1;Name=WP_006250460.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005818537.1;locus_tag=JYJ20_RS06945;product=L-lactate permease;protein_id=WP_006250460.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 35053 36144 . - . ID=gene-JYJ20_RS06950;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=JYJ20_RS06950 NZ_JAFIRP010000019.1 Protein Homology CDS 35053 36144 . - 0 ID=cds-WP_006249875.1;Parent=gene-JYJ20_RS06950;Dbxref=GenBank:WP_006249875.1;Name=WP_006249875.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005693776.1;locus_tag=JYJ20_RS06950;product=redox-regulated ATPase YchF;protein_id=WP_006249875.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 36330 36917 . - . ID=gene-JYJ20_RS06955;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=JYJ20_RS06955 NZ_JAFIRP010000019.1 Protein Homology CDS 36330 36917 . - 0 ID=cds-WP_209026095.1;Parent=gene-JYJ20_RS06955;Dbxref=GenBank:WP_209026095.1;Name=WP_209026095.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249876.1;locus_tag=JYJ20_RS06955;product=aminoacyl-tRNA hydrolase;protein_id=WP_209026095.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 36990 37979 . - . ID=gene-JYJ20_RS06960;Name=JYJ20_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06960 NZ_JAFIRP010000019.1 Protein Homology CDS 36990 37979 . - 0 ID=cds-WP_226317943.1;Parent=gene-JYJ20_RS06960;Dbxref=GenBank:WP_226317943.1;Name=WP_226317943.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249877.1;locus_tag=JYJ20_RS06960;product=D-alanyl-D-alanine carboxypeptidase family protein;protein_id=WP_226317943.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 38087 39667 . + . ID=gene-JYJ20_RS06965;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=JYJ20_RS06965 NZ_JAFIRP010000019.1 Protein Homology CDS 38087 39667 . + 0 ID=cds-WP_209026096.1;Parent=gene-JYJ20_RS06965;Dbxref=GenBank:WP_209026096.1;Name=WP_209026096.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005688062.1;locus_tag=JYJ20_RS06965;product=peptide chain release factor 3;protein_id=WP_209026096.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 39925 41499 . + . ID=gene-JYJ20_RS06970;Name=JYJ20_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06970 NZ_JAFIRP010000019.1 Protein Homology CDS 39925 41499 . + 0 ID=cds-WP_006252305.1;Parent=gene-JYJ20_RS06970;Dbxref=GenBank:WP_006252305.1;Name=WP_006252305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874733.1;locus_tag=JYJ20_RS06970;product=ABC transporter substrate-binding protein;protein_id=WP_006252305.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 41719 42651 . + . ID=gene-JYJ20_RS06975;Name=JYJ20_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06975 NZ_JAFIRP010000019.1 Protein Homology CDS 41719 42651 . + 0 ID=cds-WP_209026097.1;Parent=gene-JYJ20_RS06975;Dbxref=GenBank:WP_209026097.1;Name=WP_209026097.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252304.1;locus_tag=JYJ20_RS06975;product=ABC transporter permease;protein_id=WP_209026097.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 42661 43443 . + . ID=gene-JYJ20_RS06980;Name=JYJ20_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06980 NZ_JAFIRP010000019.1 Protein Homology CDS 42661 43443 . + 0 ID=cds-WP_209026098.1;Parent=gene-JYJ20_RS06980;Dbxref=GenBank:WP_209026098.1;Name=WP_209026098.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249882.1;locus_tag=JYJ20_RS06980;product=ABC transporter permease;protein_id=WP_209026098.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 43532 44944 . + . ID=gene-JYJ20_RS06985;Name=JYJ20_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS06985 NZ_JAFIRP010000019.1 Protein Homology CDS 43532 44944 . + 0 ID=cds-WP_209026099.1;Parent=gene-JYJ20_RS06985;Dbxref=GenBank:WP_209026099.1;Name=WP_209026099.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249883.1;locus_tag=JYJ20_RS06985;product=ABC transporter ATP-binding protein;protein_id=WP_209026099.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 45031 45774 . - . ID=gene-JYJ20_RS06990;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=JYJ20_RS06990 NZ_JAFIRP010000019.1 Protein Homology CDS 45031 45774 . - 0 ID=cds-WP_006249884.1;Parent=gene-JYJ20_RS06990;Dbxref=GenBank:WP_006249884.1;Name=WP_006249884.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992094.1;locus_tag=JYJ20_RS06990;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_006249884.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 45829 47196 . - . ID=gene-JYJ20_RS06995;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=JYJ20_RS06995 NZ_JAFIRP010000019.1 Protein Homology CDS 45829 47196 . - 0 ID=cds-WP_006249886.1;Parent=gene-JYJ20_RS06995;Dbxref=GenBank:WP_006249886.1;Name=WP_006249886.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616526.1;locus_tag=JYJ20_RS06995;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_006249886.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 47266 48657 . - . ID=gene-JYJ20_RS07000;Name=JYJ20_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07000 NZ_JAFIRP010000019.1 Protein Homology CDS 47266 48657 . - 0 ID=cds-WP_245155391.1;Parent=gene-JYJ20_RS07000;Dbxref=GenBank:WP_245155391.1;Name=WP_245155391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005621441.1;locus_tag=JYJ20_RS07000;product=tannase/feruloyl esterase family alpha/beta hydrolase;protein_id=WP_245155391.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 48931 51747 . - . ID=gene-JYJ20_RS07005;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=JYJ20_RS07005 NZ_JAFIRP010000019.1 Protein Homology CDS 48931 51747 . - 0 ID=cds-WP_006249888.1;Parent=gene-JYJ20_RS07005;Dbxref=GenBank:WP_006249888.1;Name=WP_006249888.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252299.1;locus_tag=JYJ20_RS07005;product=isoleucine--tRNA ligase;protein_id=WP_006249888.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 51850 52812 . - . ID=gene-JYJ20_RS07010;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=JYJ20_RS07010 NZ_JAFIRP010000019.1 Protein Homology CDS 51850 52812 . - 0 ID=cds-WP_006249889.1;Parent=gene-JYJ20_RS07010;Dbxref=GenBank:WP_006249889.1;Name=WP_006249889.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249889.1;locus_tag=JYJ20_RS07010;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_006249889.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 53036 54310 . + . ID=gene-JYJ20_RS07015;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=JYJ20_RS07015 NZ_JAFIRP010000019.1 Protein Homology CDS 53036 54310 . + 0 ID=cds-WP_006253718.1;Parent=gene-JYJ20_RS07015;Dbxref=GenBank:WP_006253718.1;Name=WP_006253718.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249890.1;locus_tag=JYJ20_RS07015;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_006253718.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 54328 55020 . + . ID=gene-JYJ20_RS07020;Name=JYJ20_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07020 NZ_JAFIRP010000019.1 Protein Homology CDS 54328 55020 . + 0 ID=cds-WP_006249891.1;Parent=gene-JYJ20_RS07020;Dbxref=GenBank:WP_006249891.1;Name=WP_006249891.1;Ontology_term=GO:0016787,GO:0042578,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249891.1;locus_tag=JYJ20_RS07020;product=metallophosphoesterase family protein;protein_id=WP_006249891.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 55153 55875 . + . ID=gene-JYJ20_RS07025;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=JYJ20_RS07025 NZ_JAFIRP010000019.1 Protein Homology CDS 55153 55875 . + 0 ID=cds-WP_006249892.1;Parent=gene-JYJ20_RS07025;Dbxref=GenBank:WP_006249892.1;Name=WP_006249892.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249892.1;locus_tag=JYJ20_RS07025;product=two-component system response regulator ArcA;protein_id=WP_006249892.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 55856 56413 . + . ID=gene-JYJ20_RS07030;Name=JYJ20_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07030 NZ_JAFIRP010000019.1 Protein Homology CDS 55856 56413 . + 0 ID=cds-WP_015484438.1;Parent=gene-JYJ20_RS07030;Dbxref=GenBank:WP_015484438.1;Name=WP_015484438.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484438.1;locus_tag=JYJ20_RS07030;product=porin family protein;protein_id=WP_015484438.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 56491 57720 . - . ID=gene-JYJ20_RS07035;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=JYJ20_RS07035 NZ_JAFIRP010000019.1 Protein Homology CDS 56491 57720 . - 0 ID=cds-WP_006249894.1;Parent=gene-JYJ20_RS07035;Dbxref=GenBank:WP_006249894.1;Name=WP_006249894.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249894.1;locus_tag=JYJ20_RS07035;product=phosphoglycerate dehydrogenase;protein_id=WP_006249894.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 57757 58416 . - . ID=gene-JYJ20_RS07040;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=JYJ20_RS07040 NZ_JAFIRP010000019.1 Protein Homology CDS 57757 58416 . - 0 ID=cds-WP_006249895.1;Parent=gene-JYJ20_RS07040;Dbxref=GenBank:WP_006249895.1;Name=WP_006249895.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652327.1;locus_tag=JYJ20_RS07040;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_006249895.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 58561 59895 . - . ID=gene-JYJ20_RS07045;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=JYJ20_RS07045 NZ_JAFIRP010000019.1 Protein Homology CDS 58561 59895 . - 0 ID=cds-WP_209026100.1;Parent=gene-JYJ20_RS07045;Dbxref=GenBank:WP_209026100.1;Name=WP_209026100.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007526317.1;locus_tag=JYJ20_RS07045;product=phosphoglucosamine mutase;protein_id=WP_209026100.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 59921 61453 . - . ID=gene-JYJ20_RS07050;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=JYJ20_RS07050 NZ_JAFIRP010000019.1 Protein Homology CDS 59921 61453 . - 0 ID=cds-WP_209026101.1;Parent=gene-JYJ20_RS07050;Dbxref=GenBank:WP_209026101.1;Name=WP_209026101.1;Ontology_term=GO:1901705,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=L-isoleucine biosynthetic process|1901705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252293.1;locus_tag=JYJ20_RS07050;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_209026101.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 61714 62307 . - . ID=gene-JYJ20_RS07055;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=JYJ20_RS07055 NZ_JAFIRP010000019.1 Protein Homology CDS 61714 62307 . - 0 ID=cds-WP_006249898.1;Parent=gene-JYJ20_RS07055;Dbxref=GenBank:WP_006249898.1;Name=WP_006249898.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674369.1;locus_tag=JYJ20_RS07055;product=peptidylprolyl isomerase;protein_id=WP_006249898.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 62410 62550 . - . ID=gene-JYJ20_RS07060;Name=JYJ20_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07060 NZ_JAFIRP010000019.1 Protein Homology CDS 62410 62550 . - 0 ID=cds-WP_006252292.1;Parent=gene-JYJ20_RS07060;Dbxref=GenBank:WP_006252292.1;Name=WP_006252292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252292.1;locus_tag=JYJ20_RS07060;product=hypothetical protein;protein_id=WP_006252292.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 62622 63308 . - . ID=gene-JYJ20_RS07065;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=JYJ20_RS07065 NZ_JAFIRP010000019.1 Protein Homology CDS 62622 63308 . - 0 ID=cds-WP_006253716.1;Parent=gene-JYJ20_RS07065;Dbxref=GenBank:WP_006253716.1;Name=WP_006253716.1;Ontology_term=GO:0006833,GO:0015250;gbkey=CDS;gene=aqpZ;go_function=water channel activity|0015250||IEA;go_process=water transport|0006833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617943.1;locus_tag=JYJ20_RS07065;product=aquaporin Z;protein_id=WP_006253716.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 63496 64215 . - . ID=gene-JYJ20_RS07070;Name=JYJ20_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07070 NZ_JAFIRP010000019.1 Protein Homology CDS 63496 64215 . - 0 ID=cds-WP_209026102.1;Parent=gene-JYJ20_RS07070;Dbxref=GenBank:WP_209026102.1;Name=WP_209026102.1;Note=The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26%2C from Brucella%2C was shown to assemble into a channel-like structure%2C while YggE from E. coli has been associated with resistance to oxidative stress.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253715.1;locus_tag=JYJ20_RS07070;product=SIMPL domain-containing protein;protein_id=WP_209026102.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 64273 65010 . - . ID=gene-JYJ20_RS07075;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=JYJ20_RS07075 NZ_JAFIRP010000019.1 Protein Homology CDS 64273 65010 . - 0 ID=cds-WP_209026103.1;Parent=gene-JYJ20_RS07075;Dbxref=GenBank:WP_209026103.1;Name=WP_209026103.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249948.1;locus_tag=JYJ20_RS07075;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_209026103.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 65190 66098 . + . ID=gene-JYJ20_RS07080;Name=JYJ20_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07080 NZ_JAFIRP010000019.1 Protein Homology CDS 65190 66098 . + 0 ID=cds-WP_006252288.1;Parent=gene-JYJ20_RS07080;Dbxref=GenBank:WP_006252288.1;Name=WP_006252288.1;Ontology_term=GO:0009234,GO:0046428,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase activity|0046428||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249947.1;locus_tag=JYJ20_RS07080;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_006252288.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 66174 67160 . - . ID=gene-JYJ20_RS07085;Name=JYJ20_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07085 NZ_JAFIRP010000019.1 Protein Homology CDS 66174 67160 . - 0 ID=cds-WP_006249946.1;Parent=gene-JYJ20_RS07085;Dbxref=GenBank:WP_006249946.1;Name=WP_006249946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249946.1;locus_tag=JYJ20_RS07085;product=DUF3298 domain-containing protein;protein_id=WP_006249946.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 67254 69125 . - . ID=gene-JYJ20_RS07090;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=JYJ20_RS07090 NZ_JAFIRP010000019.1 Protein Homology CDS 67254 69125 . - 0 ID=cds-WP_006249945.1;Parent=gene-JYJ20_RS07090;Dbxref=GenBank:WP_006249945.1;Name=WP_006249945.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249945.1;locus_tag=JYJ20_RS07090;product=RNA polymerase sigma factor RpoD;protein_id=WP_006249945.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 69384 71132 . - . ID=gene-JYJ20_RS07095;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=JYJ20_RS07095 NZ_JAFIRP010000019.1 Protein Homology CDS 69384 71132 . - 0 ID=cds-WP_209026104.1;Parent=gene-JYJ20_RS07095;Dbxref=GenBank:WP_209026104.1;Name=WP_209026104.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652356.1;locus_tag=JYJ20_RS07095;product=DNA primase;protein_id=WP_209026104.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 71286 71501 . - . ID=gene-JYJ20_RS07100;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=JYJ20_RS07100 NZ_JAFIRP010000019.1 Protein Homology CDS 71286 71501 . - 0 ID=cds-WP_006252283.1;Parent=gene-JYJ20_RS07100;Dbxref=GenBank:WP_006252283.1;Name=WP_006252283.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005701713.1;locus_tag=JYJ20_RS07100;product=30S ribosomal protein S21;protein_id=WP_006252283.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 71649 72245 . - . ID=gene-JYJ20_RS07105;Name=JYJ20_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07105 NZ_JAFIRP010000019.1 Protein Homology CDS 71649 72245 . - 0 ID=cds-WP_209026105.1;Parent=gene-JYJ20_RS07105;Dbxref=GenBank:WP_209026105.1;Name=WP_209026105.1;Ontology_term=GO:0003676,GO:0004519;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249513.1;locus_tag=JYJ20_RS07105;product=Uma2 family endonuclease;protein_id=WP_209026105.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 72387 73643 . + . ID=gene-JYJ20_RS07110;Name=JYJ20_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07110 NZ_JAFIRP010000019.1 Protein Homology CDS 72387 73643 . + 0 ID=cds-WP_209026106.1;Parent=gene-JYJ20_RS07110;Dbxref=GenBank:WP_209026106.1;Name=WP_209026106.1;Ontology_term=GO:0009103,GO:0008754,GO:0008755,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=O-antigen ligase activity|0008754||IEA,O antigen polymerase activity|0008755||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249514.1;locus_tag=JYJ20_RS07110;product=O-antigen ligase family protein;protein_id=WP_209026106.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 73745 74752 . - . ID=gene-JYJ20_RS07115;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=JYJ20_RS07115 NZ_JAFIRP010000019.1 Protein Homology CDS 73745 74752 . - 0 ID=cds-WP_006249515.1;Parent=gene-JYJ20_RS07115;Dbxref=GenBank:WP_006249515.1;Name=WP_006249515.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249515.1;locus_tag=JYJ20_RS07115;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_006249515.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 74749 75330 . - . ID=gene-JYJ20_RS07120;Name=JYJ20_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07120 NZ_JAFIRP010000019.1 Protein Homology CDS 74749 75330 . - 0 ID=cds-WP_006249516.1;Parent=gene-JYJ20_RS07120;Dbxref=GenBank:WP_006249516.1;Name=WP_006249516.1;Ontology_term=GO:0000166,GO:0016779,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleotidyltransferase activity|0016779||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249516.1;locus_tag=JYJ20_RS07120;product=nucleotidyltransferase family protein;protein_id=WP_006249516.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 75351 76622 . - . ID=gene-JYJ20_RS07125;Name=JYJ20_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07125 NZ_JAFIRP010000019.1 Protein Homology CDS 75351 76622 . - 0 ID=cds-WP_209026107.1;Parent=gene-JYJ20_RS07125;Dbxref=GenBank:WP_209026107.1;Name=WP_209026107.1;Ontology_term=GO:0016740,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484549.1;locus_tag=JYJ20_RS07125;product=sugar transferase;protein_id=WP_209026107.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq pseudogene 76626 77434 . - . ID=gene-JYJ20_RS07130;Name=JYJ20_RS07130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS07130;pseudo=true NZ_JAFIRP010000019.1 Protein Homology CDS 76626 77434 . - 0 ID=cds-JYJ20_RS07130;Parent=gene-JYJ20_RS07130;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014325955.1;locus_tag=JYJ20_RS07130;product=glycosyltransferase;pseudo=true;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 77437 78372 . - . ID=gene-JYJ20_RS07135;Name=JYJ20_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07135 NZ_JAFIRP010000019.1 Protein Homology CDS 77437 78372 . - 0 ID=cds-WP_209026108.1;Parent=gene-JYJ20_RS07135;Dbxref=GenBank:WP_209026108.1;Name=WP_209026108.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249518.1;locus_tag=JYJ20_RS07135;product=glycosyltransferase family 2 protein;protein_id=WP_209026108.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 78400 79569 . - . ID=gene-JYJ20_RS07140;Name=JYJ20_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07140 NZ_JAFIRP010000019.1 Protein Homology CDS 78400 79569 . - 0 ID=cds-WP_209026109.1;Parent=gene-JYJ20_RS07140;Dbxref=GenBank:WP_209026109.1;Name=WP_209026109.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026247.7;locus_tag=JYJ20_RS07140;product=EpsG family protein;protein_id=WP_209026109.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 79592 80539 . - . ID=gene-JYJ20_RS07145;Name=JYJ20_RS07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07145 NZ_JAFIRP010000019.1 Protein Homology CDS 79592 80539 . - 0 ID=cds-WP_209026110.1;Parent=gene-JYJ20_RS07145;Dbxref=GenBank:WP_209026110.1;Name=WP_209026110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249520.1;locus_tag=JYJ20_RS07145;product=glycosyltransferase family 52;protein_id=WP_209026110.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 80536 81663 . - . ID=gene-JYJ20_RS07150;Name=JYJ20_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07150 NZ_JAFIRP010000019.1 Protein Homology CDS 80536 81663 . - 0 ID=cds-WP_006249521.1;Parent=gene-JYJ20_RS07150;Dbxref=GenBank:WP_006249521.1;Name=WP_006249521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249521.1;locus_tag=JYJ20_RS07150;product=LPS O-antigen chain length determinant protein WzzB;protein_id=WP_006249521.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 81812 82153 . + . ID=gene-JYJ20_RS07155;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=JYJ20_RS07155 NZ_JAFIRP010000019.1 Protein Homology CDS 81812 82153 . + 0 ID=cds-WP_006249522.1;Parent=gene-JYJ20_RS07155;Dbxref=GenBank:WP_006249522.1;Name=WP_006249522.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005559021.1;locus_tag=JYJ20_RS07155;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_006249522.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 82258 82581 . - . ID=gene-JYJ20_RS07160;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=JYJ20_RS07160 NZ_JAFIRP010000019.1 Protein Homology CDS 82258 82581 . - 0 ID=cds-WP_006249524.1;Parent=gene-JYJ20_RS07160;Dbxref=GenBank:WP_006249524.1;Name=WP_006249524.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249524.1;locus_tag=JYJ20_RS07160;product=membrane protein insertion efficiency factor YidD;protein_id=WP_006249524.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 82530 82904 . - . ID=gene-JYJ20_RS07165;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=JYJ20_RS07165 NZ_JAFIRP010000019.1 Protein Homology CDS 82530 82904 . - 0 ID=cds-WP_006249525.1;Parent=gene-JYJ20_RS07165;Dbxref=GenBank:WP_006249525.1;Name=WP_006249525.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249525.1;locus_tag=JYJ20_RS07165;product=ribonuclease P protein component;protein_id=WP_006249525.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 82940 83074 . - . ID=gene-JYJ20_RS07170;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=JYJ20_RS07170 NZ_JAFIRP010000019.1 Protein Homology CDS 82940 83074 . - 0 ID=cds-WP_005599701.1;Parent=gene-JYJ20_RS07170;Dbxref=GenBank:WP_005599701.1;Name=WP_005599701.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005539760.1;locus_tag=JYJ20_RS07170;product=50S ribosomal protein L34;protein_id=WP_005599701.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 83311 84273 . + . ID=gene-JYJ20_RS07175;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=JYJ20_RS07175 NZ_JAFIRP010000019.1 Protein Homology CDS 83311 84273 . + 0 ID=cds-WP_209026111.1;Parent=gene-JYJ20_RS07175;Dbxref=GenBank:WP_209026111.1;Name=WP_209026111.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=protoporphyrin ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249528.1;locus_tag=JYJ20_RS07175;product=ferrochelatase;protein_id=WP_209026111.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 84337 85284 . - . ID=gene-JYJ20_RS07180;Name=JYJ20_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07180 NZ_JAFIRP010000019.1 Protein Homology CDS 84337 85284 . - 0 ID=cds-WP_209026112.1;Parent=gene-JYJ20_RS07180;Dbxref=GenBank:WP_209026112.1;Name=WP_209026112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249529.1;locus_tag=JYJ20_RS07180;product=Abi family protein;protein_id=WP_209026112.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 85496 87613 . - . ID=gene-JYJ20_RS07185;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=JYJ20_RS07185 NZ_JAFIRP010000019.1 Protein Homology CDS 85496 87613 . - 0 ID=cds-WP_021279447.1;Parent=gene-JYJ20_RS07185;Dbxref=GenBank:WP_021279447.1;Name=WP_021279447.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249530.1;locus_tag=JYJ20_RS07185;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_021279447.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 87723 88004 . - . ID=gene-JYJ20_RS07190;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=JYJ20_RS07190 NZ_JAFIRP010000019.1 Protein Homology CDS 87723 88004 . - 0 ID=cds-WP_006249531.1;Parent=gene-JYJ20_RS07190;Dbxref=GenBank:WP_006249531.1;Name=WP_006249531.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613378.1;locus_tag=JYJ20_RS07190;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_006249531.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 88107 88604 . - . ID=gene-JYJ20_RS07195;Name=JYJ20_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07195 NZ_JAFIRP010000019.1 Protein Homology CDS 88107 88604 . - 0 ID=cds-WP_006249532.1;Parent=gene-JYJ20_RS07195;Dbxref=GenBank:WP_006249532.1;Name=WP_006249532.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249532.1;locus_tag=JYJ20_RS07195;product=thioredoxin family protein;protein_id=WP_006249532.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 88629 89651 . - . ID=gene-JYJ20_RS07200;Name=JYJ20_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07200 NZ_JAFIRP010000019.1 Protein Homology CDS 88629 89651 . - 0 ID=cds-WP_209026137.1;Parent=gene-JYJ20_RS07200;Dbxref=GenBank:WP_209026137.1;Name=WP_209026137.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249533.1;locus_tag=JYJ20_RS07200;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_209026137.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 89691 91121 . - . ID=gene-JYJ20_RS07205;Name=JYJ20_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07205 NZ_JAFIRP010000019.1 Protein Homology CDS 89691 91121 . - 0 ID=cds-WP_209026113.1;Parent=gene-JYJ20_RS07205;Dbxref=GenBank:WP_209026113.1;Name=WP_209026113.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253713.1;locus_tag=JYJ20_RS07205;product=glycoside hydrolase family 32 protein;protein_id=WP_209026113.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 91226 92149 . - . ID=gene-JYJ20_RS07210;Name=JYJ20_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07210 NZ_JAFIRP010000019.1 Protein Homology CDS 91226 92149 . - 0 ID=cds-WP_006252901.1;Parent=gene-JYJ20_RS07210;Dbxref=GenBank:WP_006252901.1;Name=WP_006252901.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606644.1;locus_tag=JYJ20_RS07210;product=aminoimidazole riboside kinase;protein_id=WP_006252901.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 92266 93693 . - . ID=gene-JYJ20_RS07215;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=JYJ20_RS07215 NZ_JAFIRP010000019.1 Protein Homology CDS 92266 93693 . - 0 ID=cds-WP_006249536.1;Parent=gene-JYJ20_RS07215;Dbxref=GenBank:WP_006249536.1;Name=WP_006249536.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617789.1;locus_tag=JYJ20_RS07215;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_006249536.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 93910 94410 . - . ID=gene-JYJ20_RS07220;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=JYJ20_RS07220 NZ_JAFIRP010000019.1 Protein Homology CDS 93910 94410 . - 0 ID=cds-WP_006252270.1;Parent=gene-JYJ20_RS07220;Dbxref=GenBank:WP_006252270.1;Name=WP_006252270.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005702996.1;locus_tag=JYJ20_RS07220;product=PTS glucose transporter subunit IIA;protein_id=WP_006252270.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 94495 96216 . - . ID=gene-JYJ20_RS07225;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=JYJ20_RS07225 NZ_JAFIRP010000019.1 Protein Homology CDS 94495 96216 . - 0 ID=cds-WP_209026114.1;Parent=gene-JYJ20_RS07225;Dbxref=GenBank:WP_209026114.1;Name=WP_209026114.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992137.1;locus_tag=JYJ20_RS07225;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_209026114.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 96338 96595 . - . ID=gene-JYJ20_RS07230;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=JYJ20_RS07230 NZ_JAFIRP010000019.1 Protein Homology CDS 96338 96595 . - 0 ID=cds-WP_006249539.1;Parent=gene-JYJ20_RS07230;Dbxref=GenBank:WP_006249539.1;Name=WP_006249539.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005649965.1;locus_tag=JYJ20_RS07230;product=phosphocarrier protein Hpr;protein_id=WP_006249539.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 96856 98430 . + . ID=gene-JYJ20_RS07235;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=JYJ20_RS07235 NZ_JAFIRP010000019.1 Protein Homology CDS 96856 98430 . + 0 ID=cds-WP_209026115.1;Parent=gene-JYJ20_RS07235;Dbxref=GenBank:WP_209026115.1;Name=WP_209026115.1;Ontology_term=GO:0015888,GO:0030974,GO:0048502,GO:0016020;gbkey=CDS;gene=thiP;go_component=membrane|0016020||IEA;go_function=ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA,thiamine pyrophosphate transmembrane transport|0030974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249540.1;locus_tag=JYJ20_RS07235;product=thiamine/thiamine pyrophosphate ABC transporter permease;protein_id=WP_209026115.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 98427 99074 . + . ID=gene-JYJ20_RS07240;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=JYJ20_RS07240 NZ_JAFIRP010000019.1 Protein Homology CDS 98427 99074 . + 0 ID=cds-WP_021279452.1;Parent=gene-JYJ20_RS07240;Dbxref=GenBank:WP_021279452.1;Name=WP_021279452.1;Ontology_term=GO:0015888,GO:0030974,GO:0005524,GO:0048502,GO:0016020;gbkey=CDS;gene=thiQ;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA,thiamine pyrophosphate transmembrane transport|0030974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944271.1;locus_tag=JYJ20_RS07240;product=thiamine ABC transporter ATP-binding protein;protein_id=WP_021279452.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 99192 100610 . + . ID=gene-JYJ20_RS07245;Name=JYJ20_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07245 NZ_JAFIRP010000019.1 Protein Homology CDS 99192 100610 . + 0 ID=cds-WP_006252267.1;Parent=gene-JYJ20_RS07245;Dbxref=GenBank:WP_006252267.1;Name=WP_006252267.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252267.1;locus_tag=JYJ20_RS07245;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_006252267.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 100726 101529 . - . ID=gene-JYJ20_RS07250;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=JYJ20_RS07250 NZ_JAFIRP010000019.1 Protein Homology CDS 100726 101529 . - 0 ID=cds-WP_006250417.1;Parent=gene-JYJ20_RS07250;Dbxref=GenBank:WP_006250417.1;Name=WP_006250417.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250417.1;locus_tag=JYJ20_RS07250;product=type I methionyl aminopeptidase;protein_id=WP_006250417.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 101615 102280 . - . ID=gene-JYJ20_RS07255;Name=JYJ20_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07255 NZ_JAFIRP010000019.1 Protein Homology CDS 101615 102280 . - 0 ID=cds-WP_021279454.1;Parent=gene-JYJ20_RS07255;Dbxref=GenBank:WP_021279454.1;Name=WP_021279454.1;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652624.1;locus_tag=JYJ20_RS07255;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_021279454.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 102473 103162 . + . ID=gene-JYJ20_RS07260;Name=JYJ20_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07260 NZ_JAFIRP010000019.1 Protein Homology CDS 102473 103162 . + 0 ID=cds-WP_209026116.1;Parent=gene-JYJ20_RS07260;Dbxref=GenBank:WP_209026116.1;Name=WP_209026116.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674134.1;locus_tag=JYJ20_RS07260;product=pirin family protein;protein_id=WP_209026116.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 103230 104021 . - . ID=gene-JYJ20_RS07265;Name=JYJ20_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07265 NZ_JAFIRP010000019.1 Protein Homology CDS 103230 104021 . - 0 ID=cds-WP_006252264.1;Parent=gene-JYJ20_RS07265;Dbxref=GenBank:WP_006252264.1;Name=WP_006252264.1;Ontology_term=GO:0005975,GO:0030246,GO:0047938;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA,glucose-6-phosphate 1-epimerase activity|0047938||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250420.1;locus_tag=JYJ20_RS07265;product=D-hexose-6-phosphate mutarotase;protein_id=WP_006252264.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 104145 105149 . + . ID=gene-JYJ20_RS07270;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=JYJ20_RS07270 NZ_JAFIRP010000019.1 Protein Homology CDS 104145 105149 . + 0 ID=cds-WP_006250421.1;Parent=gene-JYJ20_RS07270;Dbxref=GenBank:WP_006250421.1;Name=WP_006250421.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605321.1;locus_tag=JYJ20_RS07270;product=class 1 fructose-bisphosphatase;protein_id=WP_006250421.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 105333 109844 . + . ID=gene-JYJ20_RS07275;Name=JYJ20_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07275 NZ_JAFIRP010000019.1 Protein Homology CDS 105333 109844 . + 0 ID=cds-WP_209026117.1;Parent=gene-JYJ20_RS07275;Dbxref=GenBank:WP_209026117.1;Name=WP_209026117.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250422.1;locus_tag=JYJ20_RS07275;product=S6 family peptidase;protein_id=WP_209026117.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 109899 111008 . - . ID=gene-JYJ20_RS07280;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=JYJ20_RS07280 NZ_JAFIRP010000019.1 Protein Homology CDS 109899 111008 . - 0 ID=cds-WP_006250423.1;Parent=gene-JYJ20_RS07280;Dbxref=GenBank:WP_006250423.1;Name=WP_006250423.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250423.1;locus_tag=JYJ20_RS07280;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_006250423.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 111100 111369 . + . ID=gene-JYJ20_RS07285;Name=JYJ20_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07285 NZ_JAFIRP010000019.1 Protein Homology CDS 111100 111369 . + 0 ID=cds-WP_209026118.1;Parent=gene-JYJ20_RS07285;Dbxref=GenBank:WP_209026118.1;Name=WP_209026118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599524.1;locus_tag=JYJ20_RS07285;product=YihD family protein;protein_id=WP_209026118.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq pseudogene 111413 112052 . + . ID=gene-JYJ20_RS07290;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=pseudogene;locus_tag=JYJ20_RS07290;pseudo=true NZ_JAFIRP010000019.1 Protein Homology CDS 111413 112052 . + 0 ID=cds-JYJ20_RS07290;Parent=gene-JYJ20_RS07290;Note=frameshifted;Ontology_term=GO:0015036;gbkey=CDS;gene=dsbA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602749.1;locus_tag=JYJ20_RS07290;product=thiol:disulfide interchange protein DsbA;pseudo=true;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 112138 113178 . + . ID=gene-JYJ20_RS07295;Name=JYJ20_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07295 NZ_JAFIRP010000019.1 Protein Homology CDS 112138 113178 . + 0 ID=cds-WP_209026119.1;Parent=gene-JYJ20_RS07295;Dbxref=GenBank:WP_209026119.1;Name=WP_209026119.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252260.1;locus_tag=JYJ20_RS07295;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_209026119.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 113180 113473 . + . ID=gene-JYJ20_RS07300;Name=JYJ20_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07300 NZ_JAFIRP010000019.1 Protein Homology CDS 113180 113473 . + 0 ID=cds-WP_006250426.1;Parent=gene-JYJ20_RS07300;Dbxref=GenBank:WP_006250426.1;Name=WP_006250426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598606.1;locus_tag=JYJ20_RS07300;product=YfcZ/YiiS family protein;protein_id=WP_006250426.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 113542 114876 . - . ID=gene-JYJ20_RS07305;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=JYJ20_RS07305 NZ_JAFIRP010000019.1 Protein Homology CDS 113542 114876 . - 0 ID=cds-WP_209026120.1;Parent=gene-JYJ20_RS07305;Dbxref=GenBank:WP_209026120.1;Name=WP_209026120.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250427.1;locus_tag=JYJ20_RS07305;product=ATP-dependent RNA helicase SrmB;protein_id=WP_209026120.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 115036 115299 . + . ID=gene-JYJ20_RS07310;Name=JYJ20_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07310 NZ_JAFIRP010000019.1 Protein Homology CDS 115036 115299 . + 0 ID=cds-WP_006250428.1;Parent=gene-JYJ20_RS07310;Dbxref=GenBank:WP_006250428.1;Name=WP_006250428.1;Ontology_term=GO:0045454,GO:0009055,GO:0015035;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650935.1;locus_tag=JYJ20_RS07310;product=GrxA family glutaredoxin;protein_id=WP_006250428.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 115347 115445 . - . ID=gene-JYJ20_RS12170;Name=JYJ20_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12170 NZ_JAFIRP010000019.1 Protein Homology CDS 115347 115445 . - 0 ID=cds-WP_006250429.1;Parent=gene-JYJ20_RS12170;Dbxref=GenBank:WP_006250429.1;Name=WP_006250429.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033493.0;locus_tag=JYJ20_RS12170;product=methionine/alanine import family NSS transporter small subunit;protein_id=WP_006250429.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 115445 116953 . - . ID=gene-JYJ20_RS07320;Name=JYJ20_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07320 NZ_JAFIRP010000019.1 Protein Homology CDS 115445 116953 . - 0 ID=cds-WP_209026121.1;Parent=gene-JYJ20_RS07320;Dbxref=GenBank:WP_209026121.1;Name=WP_209026121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250430.1;locus_tag=JYJ20_RS07320;product=sodium-dependent transporter;protein_id=WP_209026121.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 117282 118571 . - . ID=gene-JYJ20_RS07325;Name=JYJ20_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07325 NZ_JAFIRP010000019.1 Protein Homology CDS 117282 118571 . - 0 ID=cds-WP_006250431.1;Parent=gene-JYJ20_RS07325;Dbxref=GenBank:WP_006250431.1;Name=WP_006250431.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250431.1;locus_tag=JYJ20_RS07325;product=HlyC/CorC family transporter;protein_id=WP_006250431.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 118695 119492 . - . ID=gene-JYJ20_RS07330;Name=JYJ20_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07330 NZ_JAFIRP010000019.1 Protein Homology CDS 118695 119492 . - 0 ID=cds-WP_006250432.1;Parent=gene-JYJ20_RS07330;Dbxref=GenBank:WP_006250432.1;Name=WP_006250432.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250432.1;locus_tag=JYJ20_RS07330;product=cytochrome C assembly family protein;protein_id=WP_006250432.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 119708 120232 . + . ID=gene-JYJ20_RS07335;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=JYJ20_RS07335 NZ_JAFIRP010000019.1 Protein Homology CDS 119708 120232 . + 0 ID=cds-WP_209026122.1;Parent=gene-JYJ20_RS07335;Dbxref=GenBank:WP_209026122.1;Name=WP_209026122.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005621677.1;locus_tag=JYJ20_RS07335;product=23S rRNA accumulation protein YceD;protein_id=WP_209026122.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 120249 120419 . + . ID=gene-JYJ20_RS07340;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=JYJ20_RS07340 NZ_JAFIRP010000019.1 Protein Homology CDS 120249 120419 . + 0 ID=cds-WP_006251723.1;Parent=gene-JYJ20_RS07340;Dbxref=GenBank:WP_006251723.1;Name=WP_006251723.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006231206.1;locus_tag=JYJ20_RS07340;product=50S ribosomal protein L32;protein_id=WP_006251723.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 120468 121460 . + . ID=gene-JYJ20_RS07345;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=JYJ20_RS07345 NZ_JAFIRP010000019.1 Protein Homology CDS 120468 121460 . + 0 ID=cds-WP_031200495.1;Parent=gene-JYJ20_RS07345;Dbxref=GenBank:WP_031200495.1;Name=WP_031200495.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253474.1;locus_tag=JYJ20_RS07345;product=phosphate acyltransferase PlsX;protein_id=WP_031200495.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 121557 122840 . - . ID=gene-JYJ20_RS07350;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=JYJ20_RS07350 NZ_JAFIRP010000019.1 Protein Homology CDS 121557 122840 . - 0 ID=cds-WP_006250435.1;Parent=gene-JYJ20_RS07350;Dbxref=GenBank:WP_006250435.1;Name=WP_006250435.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250435.1;locus_tag=JYJ20_RS07350;product=histidinol dehydrogenase;protein_id=WP_006250435.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 122852 123751 . - . ID=gene-JYJ20_RS07355;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=JYJ20_RS07355 NZ_JAFIRP010000019.1 Protein Homology CDS 122852 123751 . - 0 ID=cds-WP_006250436.1;Parent=gene-JYJ20_RS07355;Dbxref=GenBank:WP_006250436.1;Name=WP_006250436.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599856.1;locus_tag=JYJ20_RS07355;product=ATP phosphoribosyltransferase;protein_id=WP_006250436.1;transl_table=11 NZ_JAFIRP010000019.1 cmsearch sequence_feature 123784 123911 . - . ID=id-NZ_JAFIRP010000019.1:123784..123911;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JAFIRP010000019.1 RefSeq gene 124110 124967 . + . ID=gene-JYJ20_RS07360;Name=JYJ20_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07360 NZ_JAFIRP010000019.1 Protein Homology CDS 124110 124967 . + 0 ID=cds-WP_006250437.1;Parent=gene-JYJ20_RS07360;Dbxref=GenBank:WP_006250437.1;Name=WP_006250437.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652612.1;locus_tag=JYJ20_RS07360;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_006250437.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 125108 126589 . - . ID=gene-JYJ20_RS07365;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=JYJ20_RS07365 NZ_JAFIRP010000019.1 Protein Homology CDS 125108 126589 . - 0 ID=cds-WP_006250438.1;Parent=gene-JYJ20_RS07365;Dbxref=GenBank:WP_006250438.1;Name=WP_006250438.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011199229.1;locus_tag=JYJ20_RS07365;product=ketol-acid reductoisomerase;protein_id=WP_006250438.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 126811 128046 . + . ID=gene-JYJ20_RS07370;Name=JYJ20_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07370 NZ_JAFIRP010000019.1 Protein Homology CDS 126811 128046 . + 0 ID=cds-WP_006250439.1;Parent=gene-JYJ20_RS07370;Dbxref=GenBank:WP_006250439.1;Name=WP_006250439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250439.1;locus_tag=JYJ20_RS07370;product=paraquat-inducible protein A;protein_id=WP_006250439.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 128043 129152 . - . ID=gene-JYJ20_RS07375;Name=JYJ20_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07375 NZ_JAFIRP010000019.1 Protein Homology CDS 128043 129152 . - 0 ID=cds-WP_209026123.1;Parent=gene-JYJ20_RS07375;Dbxref=GenBank:WP_209026123.1;Name=WP_209026123.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250440.1;locus_tag=JYJ20_RS07375;product=MFS transporter;protein_id=WP_209026123.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 129124 130038 . - . ID=gene-JYJ20_RS07380;Name=JYJ20_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07380 NZ_JAFIRP010000019.1 Protein Homology CDS 129124 130038 . - 0 ID=cds-WP_044428112.1;Parent=gene-JYJ20_RS07380;Dbxref=GenBank:WP_044428112.1;Name=WP_044428112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253475.1;locus_tag=JYJ20_RS07380;product=aKG-HExxH-type peptide beta-hydroxylase;protein_id=WP_044428112.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 130332 132521 . - . ID=gene-JYJ20_RS07385;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=JYJ20_RS07385 NZ_JAFIRP010000019.1 Protein Homology CDS 130332 132521 . - 0 ID=cds-WP_015484546.1;Parent=gene-JYJ20_RS07385;Dbxref=GenBank:WP_015484546.1;Name=WP_015484546.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484546.1;locus_tag=JYJ20_RS07385;product=YccS family putative transporter;protein_id=WP_015484546.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 132565 133023 . - . ID=gene-JYJ20_RS07390;Name=JYJ20_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07390 NZ_JAFIRP010000019.1 Protein Homology CDS 132565 133023 . - 0 ID=cds-WP_006250444.1;Parent=gene-JYJ20_RS07390;Dbxref=GenBank:WP_006250444.1;Name=WP_006250444.1;Ontology_term=GO:0019242,GO:0008929;gbkey=CDS;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250444.1;locus_tag=JYJ20_RS07390;product=methylglyoxal synthase;protein_id=WP_006250444.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 133149 134423 . + . ID=gene-JYJ20_RS07395;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=JYJ20_RS07395 NZ_JAFIRP010000019.1 Protein Homology CDS 133149 134423 . + 0 ID=cds-WP_209026124.1;Parent=gene-JYJ20_RS07395;Dbxref=GenBank:WP_209026124.1;Name=WP_209026124.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253476.1;locus_tag=JYJ20_RS07395;product=threonine synthase;protein_id=WP_209026124.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 134502 135236 . - . ID=gene-JYJ20_RS07400;Name=JYJ20_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07400 NZ_JAFIRP010000019.1 Protein Homology CDS 134502 135236 . - 0 ID=cds-WP_006251713.1;Parent=gene-JYJ20_RS07400;Dbxref=GenBank:WP_006251713.1;Name=WP_006251713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848602.1;locus_tag=JYJ20_RS07400;product=glutathione peroxidase;protein_id=WP_006251713.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 135351 136235 . + . ID=gene-JYJ20_RS07405;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=JYJ20_RS07405 NZ_JAFIRP010000019.1 Protein Homology CDS 135351 136235 . + 0 ID=cds-WP_006251712.1;Parent=gene-JYJ20_RS07405;Dbxref=GenBank:WP_006251712.1;Name=WP_006251712.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250447.1;locus_tag=JYJ20_RS07405;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_006251712.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 136238 136870 . + . ID=gene-JYJ20_RS07410;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=JYJ20_RS07410 NZ_JAFIRP010000019.1 Protein Homology CDS 136238 136870 . + 0 ID=cds-WP_006250448.1;Parent=gene-JYJ20_RS07410;Dbxref=GenBank:WP_006250448.1;Name=WP_006250448.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250448.1;locus_tag=JYJ20_RS07410;product=HTH-type transcriptional repressor FabR;protein_id=WP_006250448.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 136897 137196 . - . ID=gene-JYJ20_RS07415;Name=JYJ20_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07415 NZ_JAFIRP010000019.1 Protein Homology CDS 136897 137196 . - 0 ID=cds-WP_006250449.1;Parent=gene-JYJ20_RS07415;Dbxref=GenBank:WP_006250449.1;Name=WP_006250449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250449.1;locus_tag=JYJ20_RS07415;product=DUF4298 domain-containing protein;protein_id=WP_006250449.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 137285 141151 . - . ID=gene-JYJ20_RS07420;Name=JYJ20_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07420 NZ_JAFIRP010000019.1 Protein Homology CDS 137285 141151 . - 0 ID=cds-WP_044428118.1;Parent=gene-JYJ20_RS07420;Dbxref=GenBank:WP_044428118.1;Name=WP_044428118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253477.1;locus_tag=JYJ20_RS07420;product=YadA-like family protein;protein_id=WP_044428118.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 141114 141599 . - . ID=gene-JYJ20_RS07425;Name=JYJ20_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07425 NZ_JAFIRP010000019.1 Protein Homology CDS 141114 141599 . - 0 ID=cds-WP_006252916.1;Parent=gene-JYJ20_RS07425;Dbxref=GenBank:WP_006252916.1;Name=WP_006252916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252916.1;locus_tag=JYJ20_RS07425;product=hypothetical protein;protein_id=WP_006252916.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 141608 143854 . - . ID=gene-JYJ20_RS07430;Name=JYJ20_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07430 NZ_JAFIRP010000019.1 Protein Homology CDS 141608 143854 . - 0 ID=cds-WP_425331221.1;Parent=gene-JYJ20_RS07430;Dbxref=GenBank:WP_425331221.1;Name=WP_425331221.1;Ontology_term=GO:0007155,GO:0015031;gbkey=CDS;go_process=cell adhesion|0007155||IEA,protein transport|0015031||IEA;inference=COORDINATES: protein motif:HMM:NF017476.7;locus_tag=JYJ20_RS07430;product=YadA family autotransporter adhesin;protein_id=WP_425331221.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 143845 143976 . - . ID=gene-JYJ20_RS12465;Name=JYJ20_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12465 NZ_JAFIRP010000019.1 Protein Homology CDS 143845 143976 . - 0 ID=cds-WP_080762685.1;Parent=gene-JYJ20_RS12465;Dbxref=GenBank:WP_080762685.1;Name=WP_080762685.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017472.7;locus_tag=JYJ20_RS12465;product=hypothetical protein;protein_id=WP_080762685.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 144001 144216 . - . ID=gene-JYJ20_RS07440;Name=JYJ20_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07440 NZ_JAFIRP010000019.1 Protein Homology CDS 144001 144216 . - 0 ID=cds-WP_240517771.1;Parent=gene-JYJ20_RS07440;Dbxref=GenBank:WP_240517771.1;Name=WP_240517771.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024418.7;locus_tag=JYJ20_RS07440;product=ESPR domain-containing protein;protein_id=WP_240517771.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 144580 145734 . + . ID=gene-JYJ20_RS07445;Name=JYJ20_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07445 NZ_JAFIRP010000019.1 Protein Homology CDS 144580 145734 . + 0 ID=cds-WP_040081208.1;Parent=gene-JYJ20_RS07445;Dbxref=GenBank:WP_040081208.1;Name=WP_040081208.1;Ontology_term=GO:0004130,GO:0016491,GO:0020037;gbkey=CDS;go_function=cytochrome-c peroxidase activity|0004130||IEA,oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251420.1;locus_tag=JYJ20_RS07445;product=cytochrome-c peroxidase;protein_id=WP_040081208.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 145782 146771 . - . ID=gene-JYJ20_RS07450;Name=JYJ20_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07450 NZ_JAFIRP010000019.1 Protein Homology CDS 145782 146771 . - 0 ID=cds-WP_040081210.1;Parent=gene-JYJ20_RS07450;Dbxref=GenBank:WP_040081210.1;Name=WP_040081210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250453.1;locus_tag=JYJ20_RS07450;product=virulence RhuM family protein;protein_id=WP_040081210.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 146931 148295 . - . ID=gene-JYJ20_RS07455;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=JYJ20_RS07455 NZ_JAFIRP010000019.1 Protein Homology CDS 146931 148295 . - 0 ID=cds-WP_006250454.1;Parent=gene-JYJ20_RS07455;Dbxref=GenBank:WP_006250454.1;Name=WP_006250454.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252912.1;locus_tag=JYJ20_RS07455;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_006250454.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 148591 149346 . - . ID=gene-JYJ20_RS07460;Name=JYJ20_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07460 NZ_JAFIRP010000019.1 Protein Homology CDS 148591 149346 . - 0 ID=cds-WP_006251422.1;Parent=gene-JYJ20_RS07460;Dbxref=GenBank:WP_006251422.1;Name=WP_006251422.1;Ontology_term=GO:0120010,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=intermembrane phospholipid transfer|0120010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251422.1;locus_tag=JYJ20_RS07460;product=MlaA family lipoprotein;protein_id=WP_006251422.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 149501 149818 . + . ID=gene-JYJ20_RS07465;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=JYJ20_RS07465 NZ_JAFIRP010000019.1 Protein Homology CDS 149501 149818 . + 0 ID=cds-WP_006251423.1;Parent=gene-JYJ20_RS07465;Dbxref=GenBank:WP_006251423.1;Name=WP_006251423.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011608626.1;locus_tag=JYJ20_RS07465;product=met regulon transcriptional regulator MetJ;protein_id=WP_006251423.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 149866 150096 . + . ID=gene-JYJ20_RS07470;Name=JYJ20_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07470 NZ_JAFIRP010000019.1 Protein Homology CDS 149866 150096 . + 0 ID=cds-WP_006251424.1;Parent=gene-JYJ20_RS07470;Dbxref=GenBank:WP_006251424.1;Name=WP_006251424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251424.1;locus_tag=JYJ20_RS07470;product=YhdT family protein;protein_id=WP_006251424.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 150089 151513 . + . ID=gene-JYJ20_RS07475;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=JYJ20_RS07475 NZ_JAFIRP010000019.1 Protein Homology CDS 150089 151513 . + 0 ID=cds-WP_006251425.1;Parent=gene-JYJ20_RS07475;Dbxref=GenBank:WP_006251425.1;Name=WP_006251425.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251425.1;locus_tag=JYJ20_RS07475;product=sodium/pantothenate symporter;protein_id=WP_006251425.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 151590 152780 . - . ID=gene-JYJ20_RS07480;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=JYJ20_RS07480 NZ_JAFIRP010000019.1 Protein Homology CDS 151590 152780 . - 0 ID=cds-WP_006250335.1;Parent=gene-JYJ20_RS07480;Dbxref=GenBank:WP_006250335.1;Name=WP_006250335.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250335.1;locus_tag=JYJ20_RS07480;product=Na+/H+ antiporter NhaA;protein_id=WP_006250335.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 152948 153376 . + . ID=gene-JYJ20_RS07485;Name=JYJ20_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07485 NZ_JAFIRP010000019.1 Protein Homology CDS 152948 153376 . + 0 ID=cds-WP_006251426.1;Parent=gene-JYJ20_RS07485;Dbxref=GenBank:WP_006251426.1;Name=WP_006251426.1;Ontology_term=GO:0055085,GO:0005215,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992182.1;locus_tag=JYJ20_RS07485;product=EamA family transporter;protein_id=WP_006251426.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 153382 154104 . + . ID=gene-JYJ20_RS07490;Name=JYJ20_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07490 NZ_JAFIRP010000019.1 Protein Homology CDS 153382 154104 . + 0 ID=cds-WP_006250140.1;Parent=gene-JYJ20_RS07490;Dbxref=GenBank:WP_006250140.1;Name=WP_006250140.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250140.1;locus_tag=JYJ20_RS07490;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_006250140.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 154114 154533 . + . ID=gene-JYJ20_RS07495;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=JYJ20_RS07495 NZ_JAFIRP010000019.1 Protein Homology CDS 154114 154533 . + 0 ID=cds-WP_209026126.1;Parent=gene-JYJ20_RS07495;Dbxref=GenBank:WP_209026126.1;Name=WP_209026126.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599712.1;locus_tag=JYJ20_RS07495;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_209026126.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 154542 155162 . + . ID=gene-JYJ20_RS07500;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=JYJ20_RS07500 NZ_JAFIRP010000019.1 Protein Homology CDS 154542 155162 . + 0 ID=cds-WP_209026127.1;Parent=gene-JYJ20_RS07500;Dbxref=GenBank:WP_209026127.1;Name=WP_209026127.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251428.1;locus_tag=JYJ20_RS07500;product=ADP-ribose diphosphatase;protein_id=WP_209026127.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 155214 156608 . - . ID=gene-JYJ20_RS07505;Name=JYJ20_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07505 NZ_JAFIRP010000019.1 Protein Homology CDS 155214 156608 . - 0 ID=cds-WP_209026128.1;Parent=gene-JYJ20_RS07505;Dbxref=GenBank:WP_209026128.1;Name=WP_209026128.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253243.1;locus_tag=JYJ20_RS07505;product=surface lipoprotein assembly modifier;protein_id=WP_209026128.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 156678 157658 . - . ID=gene-JYJ20_RS07510;Name=JYJ20_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07510 NZ_JAFIRP010000019.1 Protein Homology CDS 156678 157658 . - 0 ID=cds-WP_425331222.1;Parent=gene-JYJ20_RS07510;Dbxref=GenBank:WP_425331222.1;Name=WP_425331222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484401.1;locus_tag=JYJ20_RS07510;product=factor H binding protein domain-containing protein;protein_id=WP_425331222.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 157797 158486 . - . ID=gene-JYJ20_RS07515;Name=JYJ20_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07515 NZ_JAFIRP010000019.1 Protein Homology CDS 157797 158486 . - 0 ID=cds-WP_209026130.1;Parent=gene-JYJ20_RS07515;Dbxref=GenBank:WP_209026130.1;Name=WP_209026130.1;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,obsolete glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248690.1;locus_tag=JYJ20_RS07515;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_209026130.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 158626 159216 . - . ID=gene-JYJ20_RS07520;Name=torD;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=JYJ20_RS07520 NZ_JAFIRP010000019.1 Protein Homology CDS 158626 159216 . - 0 ID=cds-WP_006248691.1;Parent=gene-JYJ20_RS07520;Dbxref=GenBank:WP_006248691.1;Name=WP_006248691.1;Ontology_term=GO:0051259;gbkey=CDS;gene=torD;go_process=protein complex oligomerization|0051259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248691.1;locus_tag=JYJ20_RS07520;product=molecular chaperone TorD;protein_id=WP_006248691.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 159216 161681 . - . ID=gene-JYJ20_RS07525;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=JYJ20_RS07525 NZ_JAFIRP010000019.1 Protein Homology CDS 159216 161681 . - 0 ID=cds-WP_209026131.1;Parent=gene-JYJ20_RS07525;Dbxref=GenBank:WP_209026131.1;Name=WP_209026131.1;Ontology_term=GO:0009061,GO:0009055,GO:0030151,GO:0050626;gbkey=CDS;gene=torA;go_function=electron transfer activity|0009055||IEA,molybdenum ion binding|0030151||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248692.1;locus_tag=JYJ20_RS07525;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_209026131.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 161781 162944 . - . ID=gene-JYJ20_RS07530;Name=torC;gbkey=Gene;gene=torC;gene_biotype=protein_coding;locus_tag=JYJ20_RS07530 NZ_JAFIRP010000019.1 Protein Homology CDS 161781 162944 . - 0 ID=cds-WP_006248693.1;Parent=gene-JYJ20_RS07530;Dbxref=GenBank:WP_006248693.1;Name=WP_006248693.1;Ontology_term=GO:0005506,GO:0009055,GO:0020037,GO:0009276,GO:0016020;gbkey=CDS;gene=torC;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251431.1;locus_tag=JYJ20_RS07530;product=pentaheme c-type cytochrome TorC;protein_id=WP_006248693.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 162948 163082 . - . ID=gene-JYJ20_RS07535;Name=JYJ20_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07535 NZ_JAFIRP010000019.1 Protein Homology CDS 162948 163082 . - 0 ID=cds-WP_006248694.1;Parent=gene-JYJ20_RS07535;Dbxref=GenBank:WP_006248694.1;Name=WP_006248694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248694.1;locus_tag=JYJ20_RS07535;product=hypothetical protein;protein_id=WP_006248694.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 163387 164214 . + . ID=gene-JYJ20_RS07540;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=JYJ20_RS07540 NZ_JAFIRP010000019.1 Protein Homology CDS 163387 164214 . + 0 ID=cds-WP_006253466.1;Parent=gene-JYJ20_RS07540;Dbxref=GenBank:WP_006253466.1;Name=WP_006253466.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253466.1;locus_tag=JYJ20_RS07540;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_006253466.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 164276 164884 . - . ID=gene-JYJ20_RS07545;Name=JYJ20_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07545 NZ_JAFIRP010000019.1 Protein Homology CDS 164276 164884 . - 0 ID=cds-WP_032844977.1;Parent=gene-JYJ20_RS07545;Dbxref=GenBank:WP_032844977.1;Name=WP_032844977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248696.1;locus_tag=JYJ20_RS07545;product=NapC/NirT family cytochrome c;protein_id=WP_032844977.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 164895 165323 . - . ID=gene-JYJ20_RS07550;Name=JYJ20_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07550 NZ_JAFIRP010000019.1 Protein Homology CDS 164895 165323 . - 0 ID=cds-WP_006248697.1;Parent=gene-JYJ20_RS07550;Dbxref=GenBank:WP_006248697.1;Name=WP_006248697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251434.1;locus_tag=JYJ20_RS07550;product=nitrate reductase cytochrome c-type subunit;protein_id=WP_006248697.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 165369 166247 . - . ID=gene-JYJ20_RS07555;Name=napH;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=JYJ20_RS07555 NZ_JAFIRP010000019.1 Protein Homology CDS 165369 166247 . - 0 ID=cds-WP_006248698.1;Parent=gene-JYJ20_RS07555;Dbxref=GenBank:WP_006248698.1;Name=WP_006248698.1;gbkey=CDS;gene=napH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251435.1;locus_tag=JYJ20_RS07555;product=quinol dehydrogenase ferredoxin subunit NapH;protein_id=WP_006248698.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 166247 167152 . - . ID=gene-JYJ20_RS07560;Name=napG;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=JYJ20_RS07560 NZ_JAFIRP010000019.1 Protein Homology CDS 166247 167152 . - 0 ID=cds-WP_209026132.1;Parent=gene-JYJ20_RS07560;Dbxref=GenBank:WP_209026132.1;Name=WP_209026132.1;gbkey=CDS;gene=napG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652473.1;locus_tag=JYJ20_RS07560;product=ferredoxin-type protein NapG;protein_id=WP_209026132.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 167241 169739 . - . ID=gene-JYJ20_RS07565;Name=napA;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=JYJ20_RS07565 NZ_JAFIRP010000019.1 Protein Homology CDS 167241 169739 . - 0 ID=cds-WP_006248700.1;Parent=gene-JYJ20_RS07565;Dbxref=GenBank:WP_006248700.1;Name=WP_006248700.1;Ontology_term=GO:0008940,GO:0030151,GO:0043546,GO:0051539;gbkey=CDS;gene=napA;go_function=nitrate reductase activity|0008940||IEA,molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652472.1;locus_tag=JYJ20_RS07565;product=nitrate reductase catalytic subunit NapA;protein_id=WP_006248700.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 169778 170044 . - . ID=gene-JYJ20_RS07570;Name=JYJ20_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07570 NZ_JAFIRP010000019.1 Protein Homology CDS 169778 170044 . - 0 ID=cds-WP_006248701.1;Parent=gene-JYJ20_RS07570;Dbxref=GenBank:WP_006248701.1;Name=WP_006248701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248701.1;locus_tag=JYJ20_RS07570;product=chaperone NapD;protein_id=WP_006248701.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 170037 170585 . - . ID=gene-JYJ20_RS07575;Name=napF;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=JYJ20_RS07575 NZ_JAFIRP010000019.1 Protein Homology CDS 170037 170585 . - 0 ID=cds-WP_209026133.1;Parent=gene-JYJ20_RS07575;Dbxref=GenBank:WP_209026133.1;Name=WP_209026133.1;Ontology_term=GO:0051539;gbkey=CDS;gene=napF;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248702.1;locus_tag=JYJ20_RS07575;product=ferredoxin-type protein NapF;protein_id=WP_209026133.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 170761 171348 . + . ID=gene-JYJ20_RS07580;Name=JYJ20_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07580 NZ_JAFIRP010000019.1 Protein Homology CDS 170761 171348 . + 0 ID=cds-WP_209026134.1;Parent=gene-JYJ20_RS07580;Dbxref=GenBank:WP_209026134.1;Name=WP_209026134.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248703.1;locus_tag=JYJ20_RS07580;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_209026134.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 171438 171800 . - . ID=gene-JYJ20_RS07585;Name=JYJ20_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07585 NZ_JAFIRP010000019.1 Protein Homology CDS 171438 171800 . - 0 ID=cds-WP_006248704.1;Parent=gene-JYJ20_RS07585;Dbxref=GenBank:WP_006248704.1;Name=WP_006248704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015586988.1;locus_tag=JYJ20_RS07585;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_006248704.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 171903 173438 . - . ID=gene-JYJ20_RS07590;Name=ddc;gbkey=Gene;gene=ddc;gene_biotype=protein_coding;locus_tag=JYJ20_RS07590 NZ_JAFIRP010000019.1 Protein Homology CDS 171903 173438 . - 0 ID=cds-WP_006248706.1;Parent=gene-JYJ20_RS07590;Dbxref=GenBank:WP_006248706.1;Name=WP_006248706.1;gbkey=CDS;gene=ddc;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005693296.1;locus_tag=JYJ20_RS07590;product=L-2%2C4-diaminobutyrate decarboxylase;protein_id=WP_006248706.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 173528 174892 . - . ID=gene-JYJ20_RS07595;Name=JYJ20_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07595 NZ_JAFIRP010000019.1 Protein Homology CDS 173528 174892 . - 0 ID=cds-WP_006248707.1;Parent=gene-JYJ20_RS07595;Dbxref=GenBank:WP_006248707.1;Name=WP_006248707.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005820549.1;locus_tag=JYJ20_RS07595;product=diaminobutyrate--2-oxoglutarate transaminase;protein_id=WP_006248707.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 175326 176327 . + . ID=gene-JYJ20_RS07600;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=JYJ20_RS07600 NZ_JAFIRP010000019.1 Protein Homology CDS 175326 176327 . + 0 ID=cds-WP_006248710.1;Parent=gene-JYJ20_RS07600;Dbxref=GenBank:WP_006248710.1;Name=WP_006248710.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011609079.1;locus_tag=JYJ20_RS07600;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_006248710.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 176338 177336 . + . ID=gene-JYJ20_RS07605;Name=JYJ20_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07605 NZ_JAFIRP010000019.1 Protein Homology CDS 176338 177336 . + 0 ID=cds-WP_006248711.1;Parent=gene-JYJ20_RS07605;Dbxref=GenBank:WP_006248711.1;Name=WP_006248711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248711.1;locus_tag=JYJ20_RS07605;product=2-keto-3-deoxygluconate permease;protein_id=WP_006248711.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 177333 178559 . + . ID=gene-JYJ20_RS07610;Name=JYJ20_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07610 NZ_JAFIRP010000019.1 Protein Homology CDS 177333 178559 . + 0 ID=cds-WP_006248712.1;Parent=gene-JYJ20_RS07610;Dbxref=GenBank:WP_006248712.1;Name=WP_006248712.1;Ontology_term=GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248712.1;locus_tag=JYJ20_RS07610;product=four-carbon acid sugar kinase family protein;protein_id=WP_006248712.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 178667 179422 . + . ID=gene-JYJ20_RS07615;Name=JYJ20_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07615 NZ_JAFIRP010000019.1 Protein Homology CDS 178667 179422 . + 0 ID=cds-WP_006248713.1;Parent=gene-JYJ20_RS07615;Dbxref=GenBank:WP_006248713.1;Name=WP_006248713.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248713.1;locus_tag=JYJ20_RS07615;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_006248713.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 179503 179673 . - . ID=gene-JYJ20_RS07620;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=JYJ20_RS07620 NZ_JAFIRP010000019.1 Protein Homology CDS 179503 179673 . - 0 ID=cds-WP_005613503.1;Parent=gene-JYJ20_RS07620;Dbxref=GenBank:WP_005613503.1;Name=WP_005613503.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005624479.1;locus_tag=JYJ20_RS07620;product=50S ribosomal protein L33;protein_id=WP_005613503.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 179685 179921 . - . ID=gene-JYJ20_RS07625;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=JYJ20_RS07625 NZ_JAFIRP010000019.1 Protein Homology CDS 179685 179921 . - 0 ID=cds-WP_006251446.1;Parent=gene-JYJ20_RS07625;Dbxref=GenBank:WP_006251446.1;Name=WP_006251446.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018347033.1;locus_tag=JYJ20_RS07625;product=50S ribosomal protein L28;protein_id=WP_006251446.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 180153 180878 . - . ID=gene-JYJ20_RS07630;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=JYJ20_RS07630 NZ_JAFIRP010000019.1 Protein Homology CDS 180153 180878 . - 0 ID=cds-WP_006253467.1;Parent=gene-JYJ20_RS07630;Dbxref=GenBank:WP_006253467.1;Name=WP_006253467.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248715.1;locus_tag=JYJ20_RS07630;product=RadC family protein;protein_id=WP_006253467.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 181040 182242 . + . ID=gene-JYJ20_RS07635;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=JYJ20_RS07635 NZ_JAFIRP010000019.1 Protein Homology CDS 181040 182242 . + 0 ID=cds-WP_006248716.1;Parent=gene-JYJ20_RS07635;Dbxref=GenBank:WP_006248716.1;Name=WP_006248716.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248716.1;locus_tag=JYJ20_RS07635;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_006248716.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 182242 182559 . + . ID=gene-JYJ20_RS07640;Name=JYJ20_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07640 NZ_JAFIRP010000019.1 Protein Homology CDS 182242 182559 . + 0 ID=cds-WP_006248717.1;Parent=gene-JYJ20_RS07640;Dbxref=GenBank:WP_006248717.1;Name=WP_006248717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248717.1;locus_tag=JYJ20_RS07640;product=SH3 domain-containing protein;protein_id=WP_006248717.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 182565 182738 . + . ID=gene-JYJ20_RS07645;Name=JYJ20_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07645 NZ_JAFIRP010000019.1 Protein Homology CDS 182565 182738 . + 0 ID=cds-WP_226318173.1;Parent=gene-JYJ20_RS07645;Dbxref=GenBank:WP_226318173.1;Name=WP_226318173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248718.1;locus_tag=JYJ20_RS07645;product=DUF1016 N-terminal domain-containing protein;protein_id=WP_226318173.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 182725 183564 . + . ID=gene-JYJ20_RS07650;Name=JYJ20_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07650 NZ_JAFIRP010000019.1 Protein Homology CDS 182725 183564 . + 0 ID=cds-WP_006248719.1;Parent=gene-JYJ20_RS07650;Dbxref=GenBank:WP_006248719.1;Name=WP_006248719.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248719.1;locus_tag=JYJ20_RS07650;product=glycosyltransferase family 8 protein;protein_id=WP_006248719.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 183598 184053 . + . ID=gene-JYJ20_RS07655;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=JYJ20_RS07655 NZ_JAFIRP010000019.1 Protein Homology CDS 183598 184053 . + 0 ID=cds-WP_006248720.1;Parent=gene-JYJ20_RS07655;Dbxref=GenBank:WP_006248720.1;Name=WP_006248720.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550997.1;locus_tag=JYJ20_RS07655;product=dUTP diphosphatase;protein_id=WP_006248720.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 184065 184670 . + . ID=gene-JYJ20_RS07660;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=JYJ20_RS07660 NZ_JAFIRP010000019.1 Protein Homology CDS 184065 184670 . + 0 ID=cds-WP_006248721.1;Parent=gene-JYJ20_RS07660;Dbxref=GenBank:WP_006248721.1;Name=WP_006248721.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005624468.1;locus_tag=JYJ20_RS07660;product=nucleoid occlusion factor SlmA;protein_id=WP_006248721.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 184673 184891 . + . ID=gene-JYJ20_RS07665;Name=JYJ20_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07665 NZ_JAFIRP010000019.1 Protein Homology CDS 184673 184891 . + 0 ID=cds-WP_006248722.1;Parent=gene-JYJ20_RS07665;Dbxref=GenBank:WP_006248722.1;Name=WP_006248722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650836.1;locus_tag=JYJ20_RS07665;product=YheU family protein;protein_id=WP_006248722.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 184953 185627 . + . ID=gene-JYJ20_RS07670;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=JYJ20_RS07670 NZ_JAFIRP010000019.1 Protein Homology CDS 184953 185627 . + 0 ID=cds-WP_006248723.1;Parent=gene-JYJ20_RS07670;Dbxref=GenBank:WP_006248723.1;Name=WP_006248723.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010787261.1;locus_tag=JYJ20_RS07670;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_006248723.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 185731 186762 . + . ID=gene-JYJ20_RS07675;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=JYJ20_RS07675 NZ_JAFIRP010000019.1 Protein Homology CDS 185731 186762 . + 0 ID=cds-WP_006248724.1;Parent=gene-JYJ20_RS07675;Dbxref=GenBank:WP_006248724.1;Name=WP_006248724.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248724.1;locus_tag=JYJ20_RS07675;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_006248724.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 186774 187535 . + . ID=gene-JYJ20_RS07680;Name=JYJ20_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07680 NZ_JAFIRP010000019.1 Protein Homology CDS 186774 187535 . + 0 ID=cds-WP_006248725.1;Parent=gene-JYJ20_RS07680;Dbxref=GenBank:WP_006248725.1;Name=WP_006248725.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251453.1;locus_tag=JYJ20_RS07680;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=WP_006248725.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq pseudogene 187590 187721 . - . ID=gene-JYJ20_RS07685;Name=JYJ20_RS07685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS07685;partial=true;pseudo=true;start_range=.,187590 NZ_JAFIRP010000019.1 Protein Homology CDS 187590 187721 . - 0 ID=cds-JYJ20_RS07685;Parent=gene-JYJ20_RS07685;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011497995.1;locus_tag=JYJ20_RS07685;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,187590;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 187844 190660 . - . ID=gene-JYJ20_RS07690;Name=JYJ20_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07690 NZ_JAFIRP010000019.1 Protein Homology CDS 187844 190660 . - 0 ID=cds-WP_044426874.1;Parent=gene-JYJ20_RS07690;Dbxref=GenBank:WP_044426874.1;Name=WP_044426874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252872.1;locus_tag=JYJ20_RS07690;product=two-partner secretion domain-containing protein;protein_id=WP_044426874.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 190672 192360 . - . ID=gene-JYJ20_RS07695;Name=JYJ20_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07695 NZ_JAFIRP010000019.1 Protein Homology CDS 190672 192360 . - 0 ID=cds-WP_006248727.1;Parent=gene-JYJ20_RS07695;Dbxref=GenBank:WP_006248727.1;Name=WP_006248727.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248727.1;locus_tag=JYJ20_RS07695;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_006248727.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 192431 194578 . - . ID=gene-JYJ20_RS07700;Name=JYJ20_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07700 NZ_JAFIRP010000019.1 Protein Homology CDS 192431 194578 . - 0 ID=cds-WP_006251456.1;Parent=gene-JYJ20_RS07700;Dbxref=GenBank:WP_006251456.1;Name=WP_006251456.1;Ontology_term=GO:0055085,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251456.1;locus_tag=JYJ20_RS07700;product=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;protein_id=WP_006251456.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 194873 196519 . + . ID=gene-JYJ20_RS07705;Name=JYJ20_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07705 NZ_JAFIRP010000019.1 Protein Homology CDS 194873 196519 . + 0 ID=cds-WP_209026135.1;Parent=gene-JYJ20_RS07705;Dbxref=GenBank:WP_209026135.1;Name=WP_209026135.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005606119.1;locus_tag=JYJ20_RS07705;product=ABC transporter substrate-binding protein;protein_id=WP_209026135.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 196568 199513 . - . ID=gene-JYJ20_RS07710;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=JYJ20_RS07710 NZ_JAFIRP010000019.1 Protein Homology CDS 196568 199513 . - 0 ID=cds-WP_209026136.1;Parent=gene-JYJ20_RS07710;Dbxref=GenBank:WP_209026136.1;Name=WP_209026136.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484539.1;locus_tag=JYJ20_RS07710;product=pitrilysin;protein_id=WP_209026136.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 199649 202939 . - . ID=gene-JYJ20_RS07715;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=JYJ20_RS07715 NZ_JAFIRP010000019.1 Protein Homology CDS 199649 202939 . - 0 ID=cds-WP_006248731.1;Parent=gene-JYJ20_RS07715;Dbxref=GenBank:WP_006248731.1;Name=WP_006248731.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252867.1;locus_tag=JYJ20_RS07715;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_006248731.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 202988 203281 . - . ID=gene-JYJ20_RS07720;Name=JYJ20_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07720 NZ_JAFIRP010000019.1 Protein Homology CDS 202988 203281 . - 0 ID=cds-WP_006248732.1;Parent=gene-JYJ20_RS07720;Dbxref=GenBank:WP_006248732.1;Name=WP_006248732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248732.1;locus_tag=JYJ20_RS07720;product=DUF5374 domain-containing protein;protein_id=WP_006248732.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 203274 203957 . - . ID=gene-JYJ20_RS07725;Name=JYJ20_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07725 NZ_JAFIRP010000019.1 Protein Homology CDS 203274 203957 . - 0 ID=cds-WP_006248733.1;Parent=gene-JYJ20_RS07725;Dbxref=GenBank:WP_006248733.1;Name=WP_006248733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251457.1;locus_tag=JYJ20_RS07725;product=DUF2572 family protein;protein_id=WP_006248733.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 203960 204586 . - . ID=gene-JYJ20_RS07730;Name=JYJ20_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07730 NZ_JAFIRP010000019.1 Protein Homology CDS 203960 204586 . - 0 ID=cds-WP_006251458.1;Parent=gene-JYJ20_RS07730;Dbxref=GenBank:WP_006251458.1;Name=WP_006251458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251458.1;locus_tag=JYJ20_RS07730;product=hypothetical protein;protein_id=WP_006251458.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 204618 205139 . - . ID=gene-JYJ20_RS07735;Name=JYJ20_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07735 NZ_JAFIRP010000019.1 Protein Homology CDS 204618 205139 . - 0 ID=cds-WP_006248735.1;Parent=gene-JYJ20_RS07735;Dbxref=GenBank:WP_006248735.1;Name=WP_006248735.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248735.1;locus_tag=JYJ20_RS07735;product=pilus assembly FimT family protein;protein_id=WP_006248735.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq gene 205240 205689 . - . ID=gene-JYJ20_RS07740;Name=JYJ20_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07740 NZ_JAFIRP010000019.1 Protein Homology CDS 205240 205689 . - 0 ID=cds-WP_006248736.1;Parent=gene-JYJ20_RS07740;Dbxref=GenBank:WP_006248736.1;Name=WP_006248736.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248736.1;locus_tag=JYJ20_RS07740;product=pseudoazurin;protein_id=WP_006248736.1;transl_table=11 NZ_JAFIRP010000019.1 RefSeq pseudogene 205749 206468 . - . ID=gene-JYJ20_RS07745;Name=JYJ20_RS07745;end_range=206468,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS07745;partial=true;pseudo=true NZ_JAFIRP010000019.1 Protein Homology CDS 205749 206468 . - 0 ID=cds-JYJ20_RS07745;Parent=gene-JYJ20_RS07745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=206468,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616566.1;locus_tag=JYJ20_RS07745;partial=true;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAFIRP010000002.1 1 65628 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000002.1 RefSeq region 1 65628 . + . ID=NZ_JAFIRP010000002.1:1..65628;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000002.1 RefSeq gene 1 727 . - . ID=gene-JYJ20_RS00820;Name=JYJ20_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00820;partial=true;start_range=.,1 NZ_JAFIRP010000002.1 Protein Homology CDS 1 727 . - 0 ID=cds-WP_245155365.1;Parent=gene-JYJ20_RS00820;Dbxref=GenBank:WP_245155365.1;Name=WP_245155365.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015586945.1;locus_tag=JYJ20_RS00820;partial=true;product=restriction endonuclease subunit S;protein_id=WP_245155365.1;start_range=.,1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 917 3193 . + . ID=gene-JYJ20_RS00825;Name=gshAB;gbkey=Gene;gene=gshAB;gene_biotype=protein_coding;locus_tag=JYJ20_RS00825 NZ_JAFIRP010000002.1 Protein Homology CDS 917 3193 . + 0 ID=cds-WP_061887236.1;Parent=gene-JYJ20_RS00825;Dbxref=GenBank:WP_061887236.1;Name=WP_061887236.1;Ontology_term=GO:0006750,GO:0004357,GO:0005524,GO:0046872;gbkey=CDS;gene=gshAB;go_function=glutamate-cysteine ligase activity|0004357||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249999.1;locus_tag=JYJ20_RS00825;product=bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB;protein_id=WP_061887236.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 3515 4492 . + . ID=gene-JYJ20_RS00830;Name=manX;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=JYJ20_RS00830 NZ_JAFIRP010000002.1 Protein Homology CDS 3515 4492 . + 0 ID=cds-WP_040080590.1;Parent=gene-JYJ20_RS00830;Dbxref=GenBank:WP_040080590.1;Name=WP_040080590.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;gene=manX;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612905.1;locus_tag=JYJ20_RS00830;product=PTS mannose transporter subunit IIAB;protein_id=WP_040080590.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 4504 5304 . + . ID=gene-JYJ20_RS00835;Name=JYJ20_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00835 NZ_JAFIRP010000002.1 Protein Homology CDS 4504 5304 . + 0 ID=cds-WP_006249466.1;Parent=gene-JYJ20_RS00835;Dbxref=GenBank:WP_006249466.1;Name=WP_006249466.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005716709.1;locus_tag=JYJ20_RS00835;product=PTS mannose/fructose/sorbose transporter subunit IIC;protein_id=WP_006249466.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 5318 6154 . + . ID=gene-JYJ20_RS00840;Name=JYJ20_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00840 NZ_JAFIRP010000002.1 Protein Homology CDS 5318 6154 . + 0 ID=cds-WP_040080592.1;Parent=gene-JYJ20_RS00840;Dbxref=GenBank:WP_040080592.1;Name=WP_040080592.1;Ontology_term=GO:0009401,GO:0015761,GO:0022870,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-mannose phosphotransferase system transporter activity|0022870||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,mannose transmembrane transport|0015761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005564636.1;locus_tag=JYJ20_RS00840;product=PTS mannose transporter subunit IID;protein_id=WP_040080592.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 6247 6732 . + . ID=gene-JYJ20_RS00845;Name=JYJ20_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00845 NZ_JAFIRP010000002.1 Protein Homology CDS 6247 6732 . + 0 ID=cds-WP_006249468.1;Parent=gene-JYJ20_RS00845;Dbxref=GenBank:WP_006249468.1;Name=WP_006249468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251951.1;locus_tag=JYJ20_RS00845;product=DUF986 family protein;protein_id=WP_006249468.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 6818 7609 . - . ID=gene-JYJ20_RS00850;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=JYJ20_RS00850 NZ_JAFIRP010000002.1 Protein Homology CDS 6818 7609 . - 0 ID=cds-WP_006251116.1;Parent=gene-JYJ20_RS00850;Dbxref=GenBank:WP_006251116.1;Name=WP_006251116.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251116.1;locus_tag=JYJ20_RS00850;product=triose-phosphate isomerase;protein_id=WP_006251116.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 7769 8788 . + . ID=gene-JYJ20_RS00855;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=JYJ20_RS00855 NZ_JAFIRP010000002.1 Protein Homology CDS 7769 8788 . + 0 ID=cds-WP_015484772.1;Parent=gene-JYJ20_RS00855;Dbxref=GenBank:WP_015484772.1;Name=WP_015484772.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484772.1;locus_tag=JYJ20_RS00855;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_015484772.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 8959 9747 . + . ID=gene-JYJ20_RS00860;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=JYJ20_RS00860 NZ_JAFIRP010000002.1 Protein Homology CDS 8959 9747 . + 0 ID=cds-WP_006249471.1;Parent=gene-JYJ20_RS00860;Dbxref=GenBank:WP_006249471.1;Name=WP_006249471.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249471.1;locus_tag=JYJ20_RS00860;product=5'/3'-nucleotidase SurE;protein_id=WP_006249471.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 9734 10318 . + . ID=gene-JYJ20_RS00865;Name=JYJ20_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00865 NZ_JAFIRP010000002.1 Protein Homology CDS 9734 10318 . + 0 ID=cds-WP_006249472.1;Parent=gene-JYJ20_RS00865;Dbxref=GenBank:WP_006249472.1;Name=WP_006249472.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599677.1;locus_tag=JYJ20_RS00865;product=YqaA family protein;protein_id=WP_006249472.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 10336 10836 . + . ID=gene-JYJ20_RS00870;Name=JYJ20_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00870 NZ_JAFIRP010000002.1 Protein Homology CDS 10336 10836 . + 0 ID=cds-WP_006249473.1;Parent=gene-JYJ20_RS00870;Dbxref=GenBank:WP_006249473.1;Name=WP_006249473.1;Ontology_term=GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249473.1;locus_tag=JYJ20_RS00870;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_006249473.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 10849 11049 . + . ID=gene-JYJ20_RS00875;Name=JYJ20_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00875 NZ_JAFIRP010000002.1 Protein Homology CDS 10849 11049 . + 0 ID=cds-WP_006249474.1;Parent=gene-JYJ20_RS00875;Dbxref=GenBank:WP_006249474.1;Name=WP_006249474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249474.1;locus_tag=JYJ20_RS00875;product=hypothetical protein;protein_id=WP_006249474.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 11068 12348 . + . ID=gene-JYJ20_RS00880;Name=JYJ20_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00880 NZ_JAFIRP010000002.1 Protein Homology CDS 11068 12348 . + 0 ID=cds-WP_209025933.1;Parent=gene-JYJ20_RS00880;Dbxref=GenBank:WP_209025933.1;Name=WP_209025933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251113.1;locus_tag=JYJ20_RS00880;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_209025933.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 12772 13338 . + . ID=gene-JYJ20_RS00885;Name=JYJ20_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00885 NZ_JAFIRP010000002.1 Protein Homology CDS 12772 13338 . + 0 ID=cds-WP_006249477.1;Parent=gene-JYJ20_RS00885;Dbxref=GenBank:WP_006249477.1;Name=WP_006249477.1;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251112.1;locus_tag=JYJ20_RS00885;product=DNA-3-methyladenine glycosylase I;protein_id=WP_006249477.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 13385 13615 . - . ID=gene-JYJ20_RS00890;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=JYJ20_RS00890 NZ_JAFIRP010000002.1 Protein Homology CDS 13385 13615 . - 0 ID=cds-WP_006249478.1;Parent=gene-JYJ20_RS00890;Dbxref=GenBank:WP_006249478.1;Name=WP_006249478.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005725021.1;locus_tag=JYJ20_RS00890;product=acyl carrier protein;protein_id=WP_006249478.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 13802 14479 . - . ID=gene-JYJ20_RS00895;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=JYJ20_RS00895 NZ_JAFIRP010000002.1 Protein Homology CDS 13802 14479 . - 0 ID=cds-WP_006249479.1;Parent=gene-JYJ20_RS00895;Dbxref=GenBank:WP_006249479.1;Name=WP_006249479.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249479.1;locus_tag=JYJ20_RS00895;product=ribulose-phosphate 3-epimerase;protein_id=WP_006249479.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 14673 14945 . + . ID=gene-JYJ20_RS00900;Name=JYJ20_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00900 NZ_JAFIRP010000002.1 Protein Homology CDS 14673 14945 . + 0 ID=cds-WP_006249480.1;Parent=gene-JYJ20_RS00900;Dbxref=GenBank:WP_006249480.1;Name=WP_006249480.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249480.1;locus_tag=JYJ20_RS00900;product=type B 50S ribosomal protein L31;protein_id=WP_006249480.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 14954 15079 . + . ID=gene-JYJ20_RS00905;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=JYJ20_RS00905 NZ_JAFIRP010000002.1 Protein Homology CDS 14954 15079 . + 0 ID=cds-WP_006249481.1;Parent=gene-JYJ20_RS00905;Dbxref=GenBank:WP_006249481.1;Name=WP_006249481.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249481.1;locus_tag=JYJ20_RS00905;product=type B 50S ribosomal protein L36;protein_id=WP_006249481.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 15259 16032 . + . ID=gene-JYJ20_RS00910;Name=JYJ20_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00910 NZ_JAFIRP010000002.1 Protein Homology CDS 15259 16032 . + 0 ID=cds-WP_006249482.1;Parent=gene-JYJ20_RS00910;Dbxref=GenBank:WP_006249482.1;Name=WP_006249482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602412.1;locus_tag=JYJ20_RS00910;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_006249482.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 16115 16831 . + . ID=gene-JYJ20_RS00915;Name=JYJ20_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00915 NZ_JAFIRP010000002.1 Protein Homology CDS 16115 16831 . + 0 ID=cds-WP_006249483.1;Parent=gene-JYJ20_RS00915;Dbxref=GenBank:WP_006249483.1;Name=WP_006249483.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651477.1;locus_tag=JYJ20_RS00915;product=amino acid ABC transporter permease;protein_id=WP_006249483.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 16841 17593 . + . ID=gene-JYJ20_RS00920;Name=JYJ20_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00920 NZ_JAFIRP010000002.1 Protein Homology CDS 16841 17593 . + 0 ID=cds-WP_006249484.1;Parent=gene-JYJ20_RS00920;Dbxref=GenBank:WP_006249484.1;Name=WP_006249484.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249484.1;locus_tag=JYJ20_RS00920;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_006249484.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 17809 18342 . - . ID=gene-JYJ20_RS00925;Name=JYJ20_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00925 NZ_JAFIRP010000002.1 Protein Homology CDS 17809 18342 . - 0 ID=cds-WP_006249485.1;Parent=gene-JYJ20_RS00925;Dbxref=GenBank:WP_006249485.1;Name=WP_006249485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263204.1;locus_tag=JYJ20_RS00925;product=YggT family protein;protein_id=WP_006249485.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 18448 18789 . - . ID=gene-JYJ20_RS00930;Name=JYJ20_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00930 NZ_JAFIRP010000002.1 Protein Homology CDS 18448 18789 . - 0 ID=cds-WP_006249486.1;Parent=gene-JYJ20_RS00930;Dbxref=GenBank:WP_006249486.1;Name=WP_006249486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249486.1;locus_tag=JYJ20_RS00930;product=YggL family protein;protein_id=WP_006249486.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 18813 19562 . - . ID=gene-JYJ20_RS00935;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=JYJ20_RS00935 NZ_JAFIRP010000002.1 Protein Homology CDS 18813 19562 . - 0 ID=cds-WP_021279306.1;Parent=gene-JYJ20_RS00935;Dbxref=GenBank:WP_021279306.1;Name=WP_021279306.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249487.1;locus_tag=JYJ20_RS00935;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_021279306.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 19572 20522 . - . ID=gene-JYJ20_RS00940;Name=JYJ20_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00940 NZ_JAFIRP010000002.1 Protein Homology CDS 19572 20522 . - 0 ID=cds-WP_006249488.1;Parent=gene-JYJ20_RS00940;Dbxref=GenBank:WP_006249488.1;Name=WP_006249488.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550567.1;locus_tag=JYJ20_RS00940;product=beta-ketoacyl-ACP synthase III;protein_id=WP_006249488.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 20668 21687 . - . ID=gene-JYJ20_RS00945;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=JYJ20_RS00945 NZ_JAFIRP010000002.1 Protein Homology CDS 20668 21687 . - 0 ID=cds-WP_209025934.1;Parent=gene-JYJ20_RS00945;Dbxref=GenBank:WP_209025934.1;Name=WP_209025934.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251586.1;locus_tag=JYJ20_RS00945;product=porphobilinogen synthase;protein_id=WP_209025934.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 21768 22523 . - . ID=gene-JYJ20_RS00950;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=JYJ20_RS00950 NZ_JAFIRP010000002.1 Protein Homology CDS 21768 22523 . - 0 ID=cds-WP_006249491.1;Parent=gene-JYJ20_RS00950;Dbxref=GenBank:WP_006249491.1;Name=WP_006249491.1;Ontology_term=GO:0015628,GO:0005886;gbkey=CDS;gene=tatC;go_component=plasma membrane|0005886||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249491.1;locus_tag=JYJ20_RS00950;product=twin-arginine translocase subunit TatC;protein_id=WP_006249491.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 22510 23154 . - . ID=gene-JYJ20_RS00955;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=JYJ20_RS00955 NZ_JAFIRP010000002.1 Protein Homology CDS 22510 23154 . - 0 ID=cds-WP_006249492.1;Parent=gene-JYJ20_RS00955;Dbxref=GenBank:WP_006249492.1;Name=WP_006249492.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=transmembrane protein transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249492.1;locus_tag=JYJ20_RS00955;product=Sec-independent protein translocase protein TatB;protein_id=WP_006249492.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 23158 23379 . - . ID=gene-JYJ20_RS00960;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=JYJ20_RS00960 NZ_JAFIRP010000002.1 Protein Homology CDS 23158 23379 . - 0 ID=cds-WP_006249493.1;Parent=gene-JYJ20_RS00960;Dbxref=GenBank:WP_006249493.1;Name=WP_006249493.1;gbkey=CDS;gene=tatA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011199679.1;locus_tag=JYJ20_RS00960;product=Sec-independent protein translocase subunit TatA;protein_id=WP_006249493.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 23490 25127 . - . ID=gene-JYJ20_RS00965;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=JYJ20_RS00965 NZ_JAFIRP010000002.1 Protein Homology CDS 23490 25127 . - 0 ID=cds-WP_006249494.1;Parent=gene-JYJ20_RS00965;Dbxref=GenBank:WP_006249494.1;Name=WP_006249494.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249494.1;locus_tag=JYJ20_RS00965;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_006249494.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 25201 25749 . - . ID=gene-JYJ20_RS12050;Name=JYJ20_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12050 NZ_JAFIRP010000002.1 Protein Homology CDS 25201 25749 . - 0 ID=cds-WP_342365887.1;Parent=gene-JYJ20_RS12050;Dbxref=GenBank:WP_342365887.1;Name=WP_342365887.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018009.7;locus_tag=JYJ20_RS12050;product=PDDEXK nuclease domain-containing protein;protein_id=WP_342365887.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 25819 26178 . - . ID=gene-JYJ20_RS12055;Name=JYJ20_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12055 NZ_JAFIRP010000002.1 Protein Homology CDS 25819 26178 . - 0 ID=cds-WP_342365891.1;Parent=gene-JYJ20_RS12055;Dbxref=GenBank:WP_342365891.1;Name=WP_342365891.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036995.7;locus_tag=JYJ20_RS12055;product=DUF1016 N-terminal domain-containing protein;protein_id=WP_342365891.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 26339 26986 . - . ID=gene-JYJ20_RS00975;Name=JYJ20_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00975 NZ_JAFIRP010000002.1 Protein Homology CDS 26339 26986 . - 0 ID=cds-WP_006249496.1;Parent=gene-JYJ20_RS00975;Dbxref=GenBank:WP_006249496.1;Name=WP_006249496.1;Ontology_term=GO:0006744,GO:0008289,GO:0110142;gbkey=CDS;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_function=lipid binding|0008289||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249496.1;locus_tag=JYJ20_RS00975;product=ubiquinone biosynthesis accessory factor UbiJ;protein_id=WP_006249496.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 27177 27977 . - . ID=gene-JYJ20_RS00980;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=JYJ20_RS00980 NZ_JAFIRP010000002.1 Protein Homology CDS 27177 27977 . - 0 ID=cds-WP_006249497.1;Parent=gene-JYJ20_RS00980;Dbxref=GenBank:WP_006249497.1;Name=WP_006249497.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249497.1;locus_tag=JYJ20_RS00980;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_006249497.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 28274 29227 . + . ID=gene-JYJ20_RS00985;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=JYJ20_RS00985 NZ_JAFIRP010000002.1 Protein Homology CDS 28274 29227 . + 0 ID=cds-WP_006249498.1;Parent=gene-JYJ20_RS00985;Dbxref=GenBank:WP_006249498.1;Name=WP_006249498.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011199502.1;locus_tag=JYJ20_RS00985;product=magnesium/cobalt transporter CorA;protein_id=WP_006249498.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 29380 31185 . + . ID=gene-JYJ20_RS00990;Name=JYJ20_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00990 NZ_JAFIRP010000002.1 Protein Homology CDS 29380 31185 . + 0 ID=cds-WP_209025935.1;Parent=gene-JYJ20_RS00990;Dbxref=GenBank:WP_209025935.1;Name=WP_209025935.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251971.1;locus_tag=JYJ20_RS00990;product=DUF4153 domain-containing protein;protein_id=WP_209025935.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 31228 34257 . - . ID=gene-JYJ20_RS00995;Name=JYJ20_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS00995 NZ_JAFIRP010000002.1 Protein Homology CDS 31228 34257 . - 0 ID=cds-WP_209025936.1;Parent=gene-JYJ20_RS00995;Dbxref=GenBank:WP_209025936.1;Name=WP_209025936.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249500.1;locus_tag=JYJ20_RS00995;product=glycoside hydrolase family 2 TIM barrel-domain containing protein;protein_id=WP_209025936.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 34435 35292 . + . ID=gene-JYJ20_RS01000;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=JYJ20_RS01000 NZ_JAFIRP010000002.1 Protein Homology CDS 34435 35292 . + 0 ID=cds-WP_006249501.1;Parent=gene-JYJ20_RS01000;Dbxref=GenBank:WP_006249501.1;Name=WP_006249501.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210245.1;locus_tag=JYJ20_RS01000;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_006249501.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 35375 37777 . + . ID=gene-JYJ20_RS01005;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=JYJ20_RS01005 NZ_JAFIRP010000002.1 Protein Homology CDS 35375 37777 . + 0 ID=cds-WP_161667916.1;Parent=gene-JYJ20_RS01005;Dbxref=GenBank:WP_161667916.1;Name=WP_161667916.1;Ontology_term=GO:0009252,GO:0046677,GO:0008233,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=peptidase activity|0008233||IEA,penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249502.1;locus_tag=JYJ20_RS01005;product=penicillin-binding protein 1B;protein_id=WP_161667916.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 37952 38458 . + . ID=gene-JYJ20_RS01010;Name=JYJ20_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01010 NZ_JAFIRP010000002.1 Protein Homology CDS 37952 38458 . + 0 ID=cds-WP_006249503.1;Parent=gene-JYJ20_RS01010;Dbxref=GenBank:WP_006249503.1;Name=WP_006249503.1;Ontology_term=GO:0008199,GO:0016722;gbkey=CDS;go_function=ferric iron binding|0008199||IEA,oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251975.1;locus_tag=JYJ20_RS01010;product=Dps family protein;protein_id=WP_006249503.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 38517 39230 . + . ID=gene-JYJ20_RS01015;Name=JYJ20_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01015 NZ_JAFIRP010000002.1 Protein Homology CDS 38517 39230 . + 0 ID=cds-WP_193393109.1;Parent=gene-JYJ20_RS01015;Dbxref=GenBank:WP_193393109.1;Name=WP_193393109.1;Ontology_term=GO:0032259,GO:0008170,GO:0008757,GO:0016430,GO:1904047;gbkey=CDS;go_function=N-methyltransferase activity|0008170||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,obsolete tRNA (adenine-N6)-methyltransferase activity|0016430||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618344.1;locus_tag=JYJ20_RS01015;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_193393109.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 39341 40345 . - . ID=gene-JYJ20_RS01020;Name=JYJ20_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01020 NZ_JAFIRP010000002.1 Protein Homology CDS 39341 40345 . - 0 ID=cds-WP_006249505.1;Parent=gene-JYJ20_RS01020;Dbxref=GenBank:WP_006249505.1;Name=WP_006249505.1;Ontology_term=GO:0006520,GO:0006591,GO:0004585,GO:0016597;gbkey=CDS;go_function=ornithine carbamoyltransferase activity|0004585||IEA,amino acid binding|0016597||IEA;go_process=amino acid metabolic process|0006520||IEA,ornithine metabolic process|0006591||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005651072.1;locus_tag=JYJ20_RS01020;product=ornithine carbamoyltransferase;protein_id=WP_006249505.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 40433 41272 . - . ID=gene-JYJ20_RS01025;Name=JYJ20_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01025 NZ_JAFIRP010000002.1 Protein Homology CDS 40433 41272 . - 0 ID=cds-WP_006249506.1;Parent=gene-JYJ20_RS01025;Dbxref=GenBank:WP_006249506.1;Name=WP_006249506.1;Ontology_term=GO:0009058,GO:0016853,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isomerase activity|0016853||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249506.1;locus_tag=JYJ20_RS01025;product=PhzF family phenazine biosynthesis protein;protein_id=WP_006249506.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 41462 42796 . + . ID=gene-JYJ20_RS01030;Name=JYJ20_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01030 NZ_JAFIRP010000002.1 Protein Homology CDS 41462 42796 . + 0 ID=cds-WP_209025937.1;Parent=gene-JYJ20_RS01030;Dbxref=GenBank:WP_209025937.1;Name=WP_209025937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617788.1;locus_tag=JYJ20_RS01030;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_209025937.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 42989 43777 . - . ID=gene-JYJ20_RS01035;Name=JYJ20_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01035 NZ_JAFIRP010000002.1 Protein Homology CDS 42989 43777 . - 0 ID=cds-WP_245155367.1;Parent=gene-JYJ20_RS01035;Dbxref=GenBank:WP_245155367.1;Name=WP_245155367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249630.1;locus_tag=JYJ20_RS01035;product=hypothetical protein;protein_id=WP_245155367.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 43895 44539 . - . ID=gene-JYJ20_RS01040;Name=JYJ20_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01040 NZ_JAFIRP010000002.1 GeneMarkS-2+ CDS 43895 44539 . - 0 ID=cds-WP_425331212.1;Parent=gene-JYJ20_RS01040;Dbxref=GenBank:WP_425331212.1;Name=WP_425331212.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS01040;product=hypothetical protein;protein_id=WP_425331212.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 44582 44767 . - . ID=gene-JYJ20_RS01045;Name=JYJ20_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01045 NZ_JAFIRP010000002.1 Protein Homology CDS 44582 44767 . - 0 ID=cds-WP_342365888.1;Parent=gene-JYJ20_RS01045;Dbxref=GenBank:WP_342365888.1;Name=WP_342365888.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025245.7;locus_tag=JYJ20_RS01045;product=Gp49 family protein;protein_id=WP_342365888.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq pseudogene 44761 45096 . - . ID=gene-JYJ20_RS01050;Name=JYJ20_RS01050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS01050;partial=true;pseudo=true;start_range=.,44761 NZ_JAFIRP010000002.1 Protein Homology CDS 44761 45096 . - 0 ID=cds-JYJ20_RS01050;Parent=gene-JYJ20_RS01050;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248652.1;locus_tag=JYJ20_RS01050;partial=true;product=phage terminase large subunit;pseudo=true;start_range=.,44761;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 45100 45246 . - . ID=gene-JYJ20_RS01055;Name=JYJ20_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01055 NZ_JAFIRP010000002.1 Protein Homology CDS 45100 45246 . - 0 ID=cds-WP_006248651.1;Parent=gene-JYJ20_RS01055;Dbxref=GenBank:WP_006248651.1;Name=WP_006248651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248651.1;locus_tag=JYJ20_RS01055;product=hypothetical protein;protein_id=WP_006248651.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 45246 45386 . - . ID=gene-JYJ20_RS01060;Name=JYJ20_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01060 NZ_JAFIRP010000002.1 GeneMarkS-2+ CDS 45246 45386 . - 0 ID=cds-WP_245155368.1;Parent=gene-JYJ20_RS01060;Dbxref=GenBank:WP_245155368.1;Name=WP_245155368.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS01060;product=DUF1804 family protein;protein_id=WP_245155368.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 45344 45565 . - . ID=gene-JYJ20_RS12435;Name=JYJ20_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12435 NZ_JAFIRP010000002.1 Protein Homology CDS 45344 45565 . - 0 ID=cds-WP_425331213.1;Parent=gene-JYJ20_RS12435;Dbxref=GenBank:WP_425331213.1;Name=WP_425331213.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022297.6;locus_tag=JYJ20_RS12435;product=DUF2644 domain-containing protein;protein_id=WP_425331213.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 45808 46485 . - . ID=gene-JYJ20_RS01070;Name=JYJ20_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01070 NZ_JAFIRP010000002.1 Protein Homology CDS 45808 46485 . - 0 ID=cds-WP_006249509.1;Parent=gene-JYJ20_RS01070;Dbxref=GenBank:WP_006249509.1;Name=WP_006249509.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249509.1;locus_tag=JYJ20_RS01070;product=phosphoribosyltransferase family protein;protein_id=WP_006249509.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 46603 47415 . + . ID=gene-JYJ20_RS01075;Name=JYJ20_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01075 NZ_JAFIRP010000002.1 Protein Homology CDS 46603 47415 . + 0 ID=cds-WP_006249510.1;Parent=gene-JYJ20_RS01075;Dbxref=GenBank:WP_006249510.1;Name=WP_006249510.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005610932.1;locus_tag=JYJ20_RS01075;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_006249510.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 47463 47732 . - . ID=gene-JYJ20_RS12395;Name=JYJ20_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12395 NZ_JAFIRP010000002.1 Protein Homology CDS 47463 47732 . - 0 ID=cds-WP_006251994.1;Parent=gene-JYJ20_RS12395;Dbxref=GenBank:WP_006251994.1;Name=WP_006251994.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251994.1;locus_tag=JYJ20_RS12395;product=EamA family transporter;protein_id=WP_006251994.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 47705 48382 . - . ID=gene-JYJ20_RS01080;Name=JYJ20_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01080 NZ_JAFIRP010000002.1 Protein Homology CDS 47705 48382 . - 0 ID=cds-WP_342365889.1;Parent=gene-JYJ20_RS01080;Dbxref=GenBank:WP_342365889.1;Name=WP_342365889.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251993.1;locus_tag=JYJ20_RS01080;product=DMT family transporter;protein_id=WP_342365889.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 48484 48741 . - . ID=gene-JYJ20_RS01085;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=JYJ20_RS01085 NZ_JAFIRP010000002.1 Protein Homology CDS 48484 48741 . - 0 ID=cds-WP_006249511.1;Parent=gene-JYJ20_RS01085;Dbxref=GenBank:WP_006249511.1;Name=WP_006249511.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011608400.1;locus_tag=JYJ20_RS01085;product=50S ribosomal protein L27;protein_id=WP_006249511.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 48762 49073 . - . ID=gene-JYJ20_RS01090;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=JYJ20_RS01090 NZ_JAFIRP010000002.1 Protein Homology CDS 48762 49073 . - 0 ID=cds-WP_006251992.1;Parent=gene-JYJ20_RS01090;Dbxref=GenBank:WP_006251992.1;Name=WP_006251992.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618624.1;locus_tag=JYJ20_RS01090;product=50S ribosomal protein L21;protein_id=WP_006251992.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 49351 50349 . + . ID=gene-JYJ20_RS01095;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=JYJ20_RS01095 NZ_JAFIRP010000002.1 Protein Homology CDS 49351 50349 . + 0 ID=cds-WP_006253645.1;Parent=gene-JYJ20_RS01095;Dbxref=GenBank:WP_006253645.1;Name=WP_006253645.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253645.1;locus_tag=JYJ20_RS01095;product=octaprenyl diphosphate synthase;protein_id=WP_006253645.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 50452 51198 . + . ID=gene-JYJ20_RS01100;Name=JYJ20_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01100 NZ_JAFIRP010000002.1 Protein Homology CDS 50452 51198 . + 0 ID=cds-WP_061887200.1;Parent=gene-JYJ20_RS01100;Dbxref=GenBank:WP_061887200.1;Name=WP_061887200.1;Ontology_term=GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005753705.1;locus_tag=JYJ20_RS01100;product=epoxyqueuosine reductase QueH;protein_id=WP_061887200.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 51615 52550 . + . ID=gene-JYJ20_RS01105;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=JYJ20_RS01105 NZ_JAFIRP010000002.1 Protein Homology CDS 51615 52550 . + 0 ID=cds-WP_006250313.1;Parent=gene-JYJ20_RS01105;Dbxref=GenBank:WP_006250313.1;Name=WP_006250313.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014990844.1;locus_tag=JYJ20_RS01105;product=ACP S-malonyltransferase;protein_id=WP_006250313.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 52567 53031 . + . ID=gene-JYJ20_RS01110;Name=JYJ20_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01110 NZ_JAFIRP010000002.1 Protein Homology CDS 52567 53031 . + 0 ID=cds-WP_006250314.1;Parent=gene-JYJ20_RS01110;Dbxref=GenBank:WP_006250314.1;Name=WP_006250314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250314.1;locus_tag=JYJ20_RS01110;product=hypothetical protein;protein_id=WP_006250314.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 53052 53774 . + . ID=gene-JYJ20_RS01115;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=JYJ20_RS01115 NZ_JAFIRP010000002.1 Protein Homology CDS 53052 53774 . + 0 ID=cds-WP_006250315.1;Parent=gene-JYJ20_RS01115;Dbxref=GenBank:WP_006250315.1;Name=WP_006250315.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250315.1;locus_tag=JYJ20_RS01115;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_006250315.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 53880 55178 . + . ID=gene-JYJ20_RS01120;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=JYJ20_RS01120 NZ_JAFIRP010000002.1 Protein Homology CDS 53880 55178 . + 0 ID=cds-WP_006250316.1;Parent=gene-JYJ20_RS01120;Dbxref=GenBank:WP_006250316.1;Name=WP_006250316.1;Ontology_term=GO:0015803,GO:0015658,GO:0016020;gbkey=CDS;gene=brnQ;go_component=membrane|0016020||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250316.1;locus_tag=JYJ20_RS01120;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_006250316.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 55224 56048 . + . ID=gene-JYJ20_RS01125;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=JYJ20_RS01125 NZ_JAFIRP010000002.1 Protein Homology CDS 55224 56048 . + 0 ID=cds-WP_006250317.1;Parent=gene-JYJ20_RS01125;Dbxref=GenBank:WP_006250317.1;Name=WP_006250317.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005713993.1;locus_tag=JYJ20_RS01125;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_006250317.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 56131 56565 . - . ID=gene-JYJ20_RS01130;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=JYJ20_RS01130 NZ_JAFIRP010000002.1 Protein Homology CDS 56131 56565 . - 0 ID=cds-WP_006250318.1;Parent=gene-JYJ20_RS01130;Dbxref=GenBank:WP_006250318.1;Name=WP_006250318.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602846.1;locus_tag=JYJ20_RS01130;product=D-aminoacyl-tRNA deacylase;protein_id=WP_006250318.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 56540 57385 . - . ID=gene-JYJ20_RS01135;Name=JYJ20_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01135 NZ_JAFIRP010000002.1 Protein Homology CDS 56540 57385 . - 0 ID=cds-WP_006250319.1;Parent=gene-JYJ20_RS01135;Dbxref=GenBank:WP_006250319.1;Name=WP_006250319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250319.1;locus_tag=JYJ20_RS01135;product=virulence factor BrkB family protein;protein_id=WP_006250319.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 57387 58625 . - . ID=gene-JYJ20_RS01140;Name=proA;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=JYJ20_RS01140 NZ_JAFIRP010000002.1 Protein Homology CDS 57387 58625 . - 0 ID=cds-WP_006250320.1;Parent=gene-JYJ20_RS01140;Dbxref=GenBank:WP_006250320.1;Name=WP_006250320.1;Ontology_term=GO:0055129,GO:0004350;gbkey=CDS;gene=proA;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251984.1;locus_tag=JYJ20_RS01140;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_006250320.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 58909 60792 . + . ID=gene-JYJ20_RS01145;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=JYJ20_RS01145 NZ_JAFIRP010000002.1 Protein Homology CDS 58909 60792 . + 0 ID=cds-WP_006251983.1;Parent=gene-JYJ20_RS01145;Dbxref=GenBank:WP_006251983.1;Name=WP_006251983.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251983.1;locus_tag=JYJ20_RS01145;product=DNA mismatch repair endonuclease MutL;protein_id=WP_006251983.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 60811 61080 . - . ID=gene-JYJ20_RS01150;Name=JYJ20_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01150 NZ_JAFIRP010000002.1 Protein Homology CDS 60811 61080 . - 0 ID=cds-WP_006250322.1;Parent=gene-JYJ20_RS01150;Dbxref=GenBank:WP_006250322.1;Name=WP_006250322.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250322.1;locus_tag=JYJ20_RS01150;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_006250322.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 61067 61333 . - . ID=gene-JYJ20_RS01155;Name=JYJ20_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01155 NZ_JAFIRP010000002.1 Protein Homology CDS 61067 61333 . - 0 ID=cds-WP_006250323.1;Parent=gene-JYJ20_RS01155;Dbxref=GenBank:WP_006250323.1;Name=WP_006250323.1;Ontology_term=GO:0044010,GO:0000987,GO:0015643;gbkey=CDS;go_function=cis-regulatory region sequence-specific DNA binding|0000987||IEA,toxic substance binding|0015643||IEA;go_process=single-species biofilm formation|0044010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250323.1;locus_tag=JYJ20_RS01155;product=type II toxin-antitoxin system RelB/DinJ family antitoxin;protein_id=WP_006250323.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 61773 62726 . + . ID=gene-JYJ20_RS01160;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=JYJ20_RS01160 NZ_JAFIRP010000002.1 Protein Homology CDS 61773 62726 . + 0 ID=cds-WP_209025939.1;Parent=gene-JYJ20_RS01160;Dbxref=GenBank:WP_209025939.1;Name=WP_209025939.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252930.1;locus_tag=JYJ20_RS01160;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_209025939.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 62795 63067 . + . ID=gene-JYJ20_RS01165;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=JYJ20_RS01165 NZ_JAFIRP010000002.1 Protein Homology CDS 62795 63067 . + 0 ID=cds-WP_126301178.1;Parent=gene-JYJ20_RS01165;Dbxref=GenBank:WP_126301178.1;Name=WP_126301178.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250326.1;locus_tag=JYJ20_RS01165;product=RNA chaperone Hfq;protein_id=WP_126301178.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 63087 64472 . + . ID=gene-JYJ20_RS01170;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=JYJ20_RS01170 NZ_JAFIRP010000002.1 Protein Homology CDS 63087 64472 . + 0 ID=cds-WP_209025940.1;Parent=gene-JYJ20_RS01170;Dbxref=GenBank:WP_209025940.1;Name=WP_209025940.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005712221.1;locus_tag=JYJ20_RS01170;product=ribosome rescue GTPase HflX;protein_id=WP_209025940.1;transl_table=11 NZ_JAFIRP010000002.1 RefSeq gene 64694 65628 . - . ID=gene-JYJ20_RS01175;Name=JYJ20_RS01175;end_range=65628,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01175;partial=true NZ_JAFIRP010000002.1 Protein Homology CDS 64694 65628 . - 2 ID=cds-WP_209025941.1;Parent=gene-JYJ20_RS01175;Dbxref=GenBank:WP_209025941.1;Name=WP_209025941.1;Ontology_term=GO:0007155,GO:0015031;end_range=65628,.;gbkey=CDS;go_process=cell adhesion|0007155||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484777.1;locus_tag=JYJ20_RS01175;partial=true;product=YadA family autotransporter adhesin;protein_id=WP_209025941.1;transl_table=11 ##sequence-region NZ_JAFIRP010000020.1 1 3212 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000020.1 RefSeq region 1 3212 . + . ID=NZ_JAFIRP010000020.1:1..3212;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000020.1 RefSeq gene 3 2901 . - . ID=gene-JYJ20_RS07750;Name=JYJ20_RS07750;gbkey=Gene;gene_biotype=rRNA;locus_tag=JYJ20_RS07750 NZ_JAFIRP010000020.1 cmsearch rRNA 3 2901 . - . ID=rna-JYJ20_RS07750;Parent=gene-JYJ20_RS07750;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=JYJ20_RS07750;product=23S ribosomal RNA NZ_JAFIRP010000020.1 cmsearch exon 3 2901 . - . ID=exon-JYJ20_RS07750-1;Parent=rna-JYJ20_RS07750;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=JYJ20_RS07750;product=23S ribosomal RNA ##sequence-region NZ_JAFIRP010000021.1 1 37105 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000021.1 RefSeq region 1 37105 . + . ID=NZ_JAFIRP010000021.1:1..37105;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000021.1 RefSeq gene 1 1664 . + . ID=gene-JYJ20_RS07755;Name=JYJ20_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07755;partial=true;start_range=.,1 NZ_JAFIRP010000021.1 Protein Homology CDS 1 1664 . + 2 ID=cds-WP_209026138.1;Parent=gene-JYJ20_RS07755;Dbxref=GenBank:WP_209026138.1;Name=WP_209026138.1;Ontology_term=GO:0009307,GO:0003677,GO:0008168,GO:0009007,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248054.1;locus_tag=JYJ20_RS07755;partial=true;product=class I SAM-dependent DNA methyltransferase;protein_id=WP_209026138.1;start_range=.,1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 1654 2988 . + . ID=gene-JYJ20_RS07760;Name=JYJ20_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07760 NZ_JAFIRP010000021.1 Protein Homology CDS 1654 2988 . + 0 ID=cds-WP_209026139.1;Parent=gene-JYJ20_RS07760;Dbxref=GenBank:WP_209026139.1;Name=WP_209026139.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248053.1;locus_tag=JYJ20_RS07760;product=restriction endonuclease subunit S;protein_id=WP_209026139.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 2988 6146 . + . ID=gene-JYJ20_RS07765;Name=JYJ20_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07765 NZ_JAFIRP010000021.1 Protein Homology CDS 2988 6146 . + 0 ID=cds-WP_209026140.1;Parent=gene-JYJ20_RS07765;Dbxref=GenBank:WP_209026140.1;Name=WP_209026140.1;Ontology_term=GO:0009307,GO:0003677,GO:0004386,GO:0005524,GO:0009035,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,type I site-specific deoxyribonuclease activity|0009035||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248052.1;locus_tag=JYJ20_RS07765;product=type I restriction endonuclease subunit R;protein_id=WP_209026140.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 6180 9071 . - . ID=gene-JYJ20_RS07770;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=JYJ20_RS07770 NZ_JAFIRP010000021.1 Protein Homology CDS 6180 9071 . - 0 ID=cds-WP_032849179.1;Parent=gene-JYJ20_RS07770;Dbxref=GenBank:WP_032849179.1;Name=WP_032849179.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012073225.1;locus_tag=JYJ20_RS07770;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_032849179.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 9243 9524 . - . ID=gene-JYJ20_RS07775;Name=JYJ20_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07775 NZ_JAFIRP010000021.1 Protein Homology CDS 9243 9524 . - 0 ID=cds-WP_006252387.1;Parent=gene-JYJ20_RS07775;Dbxref=GenBank:WP_006252387.1;Name=WP_006252387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006717394.1;locus_tag=JYJ20_RS07775;product=YciI family protein;protein_id=WP_006252387.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 9526 9990 . - . ID=gene-JYJ20_RS07780;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=JYJ20_RS07780 NZ_JAFIRP010000021.1 Protein Homology CDS 9526 9990 . - 0 ID=cds-WP_006248049.1;Parent=gene-JYJ20_RS07780;Dbxref=GenBank:WP_006248049.1;Name=WP_006248049.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253011.1;locus_tag=JYJ20_RS07780;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_006248049.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 9980 10537 . - . ID=gene-JYJ20_RS07785;Name=JYJ20_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07785 NZ_JAFIRP010000021.1 Protein Homology CDS 9980 10537 . - 0 ID=cds-WP_006248048.1;Parent=gene-JYJ20_RS07785;Dbxref=GenBank:WP_006248048.1;Name=WP_006248048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248048.1;locus_tag=JYJ20_RS07785;product=septation protein A;protein_id=WP_006248048.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 10546 11295 . - . ID=gene-JYJ20_RS07790;Name=JYJ20_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07790 NZ_JAFIRP010000021.1 Protein Homology CDS 10546 11295 . - 0 ID=cds-WP_006248047.1;Parent=gene-JYJ20_RS07790;Dbxref=GenBank:WP_006248047.1;Name=WP_006248047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248047.1;locus_tag=JYJ20_RS07790;product=hypothetical protein;protein_id=WP_006248047.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 11426 11863 . + . ID=gene-JYJ20_RS07795;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=JYJ20_RS07795 NZ_JAFIRP010000021.1 Protein Homology CDS 11426 11863 . + 0 ID=cds-WP_006248046.1;Parent=gene-JYJ20_RS07795;Dbxref=GenBank:WP_006248046.1;Name=WP_006248046.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652771.1;locus_tag=JYJ20_RS07795;product=terminus macrodomain insulation protein YfbV;protein_id=WP_006248046.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 11983 12058 . - . ID=gene-JYJ20_RS07800;Name=JYJ20_RS07800;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS07800 NZ_JAFIRP010000021.1 tRNAscan-SE tRNA 11983 12058 . - . ID=rna-JYJ20_RS07800;Parent=gene-JYJ20_RS07800;anticodon=(pos:complement(12023..12025));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS07800;product=tRNA-Asn NZ_JAFIRP010000021.1 tRNAscan-SE exon 11983 12058 . - . ID=exon-JYJ20_RS07800-1;Parent=rna-JYJ20_RS07800;anticodon=(pos:complement(12023..12025));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS07800;product=tRNA-Asn NZ_JAFIRP010000021.1 RefSeq gene 12174 12923 . - . ID=gene-JYJ20_RS07805;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=JYJ20_RS07805 NZ_JAFIRP010000021.1 Protein Homology CDS 12174 12923 . - 0 ID=cds-WP_006253460.1;Parent=gene-JYJ20_RS07805;Dbxref=GenBank:WP_006253460.1;Name=WP_006253460.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253460.1;locus_tag=JYJ20_RS07805;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_006253460.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 13022 14251 . - . ID=gene-JYJ20_RS07810;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=JYJ20_RS07810 NZ_JAFIRP010000021.1 Protein Homology CDS 13022 14251 . - 0 ID=cds-WP_006248044.1;Parent=gene-JYJ20_RS07810;Dbxref=GenBank:WP_006248044.1;Name=WP_006248044.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253014.1;locus_tag=JYJ20_RS07810;product=molybdopterin molybdotransferase MoeA;protein_id=WP_006248044.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 14273 14890 . - . ID=gene-JYJ20_RS07815;Name=JYJ20_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07815 NZ_JAFIRP010000021.1 Protein Homology CDS 14273 14890 . - 0 ID=cds-WP_006248043.1;Parent=gene-JYJ20_RS07815;Dbxref=GenBank:WP_006248043.1;Name=WP_006248043.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006719828.1;locus_tag=JYJ20_RS07815;product=MarC family protein;protein_id=WP_006248043.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 14958 16169 . - . ID=gene-JYJ20_RS07820;Name=JYJ20_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07820 NZ_JAFIRP010000021.1 Protein Homology CDS 14958 16169 . - 0 ID=cds-WP_209026141.1;Parent=gene-JYJ20_RS07820;Dbxref=GenBank:WP_209026141.1;Name=WP_209026141.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248042.1;locus_tag=JYJ20_RS07820;product=ATP-binding protein;protein_id=WP_209026141.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 16366 18297 . + . ID=gene-JYJ20_RS07825;Name=JYJ20_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07825 NZ_JAFIRP010000021.1 Protein Homology CDS 16366 18297 . + 0 ID=cds-WP_209026142.1;Parent=gene-JYJ20_RS07825;Dbxref=GenBank:WP_209026142.1;Name=WP_209026142.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253015.1;locus_tag=JYJ20_RS07825;product=ABC transporter ATP-binding protein;protein_id=WP_209026142.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 18576 18833 . + . ID=gene-JYJ20_RS07830;Name=JYJ20_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07830 NZ_JAFIRP010000021.1 Protein Homology CDS 18576 18833 . + 0 ID=cds-WP_006248040.1;Parent=gene-JYJ20_RS07830;Dbxref=GenBank:WP_006248040.1;Name=WP_006248040.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248040.1;locus_tag=JYJ20_RS07830;product=helix-turn-helix domain-containing protein;protein_id=WP_006248040.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq pseudogene 18880 19499 . - . ID=gene-JYJ20_RS07835;Name=JYJ20_RS07835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS07835;pseudo=true NZ_JAFIRP010000021.1 Protein Homology CDS 18880 19499 . - 0 ID=cds-JYJ20_RS07835;Parent=gene-JYJ20_RS07835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248039.1;locus_tag=JYJ20_RS07835;product=glutathione S-transferase;pseudo=true;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 19501 20154 . - . ID=gene-JYJ20_RS07840;Name=JYJ20_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07840 NZ_JAFIRP010000021.1 Protein Homology CDS 19501 20154 . - 0 ID=cds-WP_006248038.1;Parent=gene-JYJ20_RS07840;Dbxref=GenBank:WP_006248038.1;Name=WP_006248038.1;Ontology_term=GO:0001522,GO:0004730;gbkey=CDS;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253017.1;locus_tag=JYJ20_RS07840;product=TIGR01621 family pseudouridine synthase;protein_id=WP_006248038.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 20203 20862 . + . ID=gene-JYJ20_RS07845;Name=JYJ20_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07845 NZ_JAFIRP010000021.1 Protein Homology CDS 20203 20862 . + 0 ID=cds-WP_006248037.1;Parent=gene-JYJ20_RS07845;Dbxref=GenBank:WP_006248037.1;Name=WP_006248037.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248037.1;locus_tag=JYJ20_RS07845;product=histidine phosphatase family protein;protein_id=WP_006248037.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 20899 21945 . - . ID=gene-JYJ20_RS07850;Name=JYJ20_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07850 NZ_JAFIRP010000021.1 Protein Homology CDS 20899 21945 . - 0 ID=cds-WP_209026143.1;Parent=gene-JYJ20_RS07850;Dbxref=GenBank:WP_209026143.1;Name=WP_209026143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253019.1;locus_tag=JYJ20_RS07850;product=YcjF family protein;protein_id=WP_209026143.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 21945 22898 . - . ID=gene-JYJ20_RS07855;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=JYJ20_RS07855 NZ_JAFIRP010000021.1 Protein Homology CDS 21945 22898 . - 0 ID=cds-WP_006252380.1;Parent=gene-JYJ20_RS07855;Dbxref=GenBank:WP_006252380.1;Name=WP_006252380.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252380.1;locus_tag=JYJ20_RS07855;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_006252380.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 22976 23602 . - . ID=gene-JYJ20_RS07860;Name=JYJ20_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07860 NZ_JAFIRP010000021.1 Protein Homology CDS 22976 23602 . - 0 ID=cds-WP_006248034.1;Parent=gene-JYJ20_RS07860;Dbxref=GenBank:WP_006248034.1;Name=WP_006248034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248034.1;locus_tag=JYJ20_RS07860;product=DUF2238 domain-containing protein;protein_id=WP_006248034.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 23602 24459 . - . ID=gene-JYJ20_RS07865;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=JYJ20_RS07865 NZ_JAFIRP010000021.1 Protein Homology CDS 23602 24459 . - 0 ID=cds-WP_006248033.1;Parent=gene-JYJ20_RS07865;Dbxref=GenBank:WP_006248033.1;Name=WP_006248033.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609757.1;locus_tag=JYJ20_RS07865;product=co-chaperone DjlA;protein_id=WP_006248033.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 24507 25217 . - . ID=gene-JYJ20_RS07870;Name=JYJ20_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07870 NZ_JAFIRP010000021.1 Protein Homology CDS 24507 25217 . - 0 ID=cds-WP_006252379.1;Parent=gene-JYJ20_RS07870;Dbxref=GenBank:WP_006252379.1;Name=WP_006252379.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252379.1;locus_tag=JYJ20_RS07870;product=DMT family transporter;protein_id=WP_006252379.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 25453 25926 . - . ID=gene-JYJ20_RS07875;Name=JYJ20_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07875 NZ_JAFIRP010000021.1 Protein Homology CDS 25453 25926 . - 0 ID=cds-WP_006252377.1;Parent=gene-JYJ20_RS07875;Dbxref=GenBank:WP_006252377.1;Name=WP_006252377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596217.1;locus_tag=JYJ20_RS07875;product=OmpA family protein;protein_id=WP_006252377.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 25953 27239 . - . ID=gene-JYJ20_RS07880;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=JYJ20_RS07880 NZ_JAFIRP010000021.1 Protein Homology CDS 25953 27239 . - 0 ID=cds-WP_006252376.1;Parent=gene-JYJ20_RS07880;Dbxref=GenBank:WP_006252376.1;Name=WP_006252376.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991826.1;locus_tag=JYJ20_RS07880;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_006252376.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 27255 28445 . - . ID=gene-JYJ20_RS07885;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=JYJ20_RS07885 NZ_JAFIRP010000021.1 Protein Homology CDS 27255 28445 . - 0 ID=cds-WP_209026144.1;Parent=gene-JYJ20_RS07885;Dbxref=GenBank:WP_209026144.1;Name=WP_209026144.1;Ontology_term=GO:0043213,GO:0019534,GO:0016020;gbkey=CDS;gene=tolA;go_component=membrane|0016020||IEA;go_function=toxin transmembrane transporter activity|0019534||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249843.1;locus_tag=JYJ20_RS07885;product=cell envelope integrity protein TolA;protein_id=WP_209026144.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 28459 28896 . - . ID=gene-JYJ20_RS07890;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=JYJ20_RS07890 NZ_JAFIRP010000021.1 Protein Homology CDS 28459 28896 . - 0 ID=cds-WP_006249842.1;Parent=gene-JYJ20_RS07890;Dbxref=GenBank:WP_006249842.1;Name=WP_006249842.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596213.1;locus_tag=JYJ20_RS07890;product=colicin uptake protein TolR;protein_id=WP_006249842.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 29038 29718 . - . ID=gene-JYJ20_RS07895;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=JYJ20_RS07895 NZ_JAFIRP010000021.1 Protein Homology CDS 29038 29718 . - 0 ID=cds-WP_006249841.1;Parent=gene-JYJ20_RS07895;Dbxref=GenBank:WP_006249841.1;Name=WP_006249841.1;Ontology_term=GO:0043213,GO:0016020;gbkey=CDS;gene=tolQ;go_component=membrane|0016020||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596212.1;locus_tag=JYJ20_RS07895;product=protein TolQ;protein_id=WP_006249841.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 29740 30141 . - . ID=gene-JYJ20_RS07900;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=JYJ20_RS07900 NZ_JAFIRP010000021.1 Protein Homology CDS 29740 30141 . - 0 ID=cds-WP_015484150.1;Parent=gene-JYJ20_RS07900;Dbxref=GenBank:WP_015484150.1;Name=WP_015484150.1;Ontology_term=GO:0047617,GO:0005737;gbkey=CDS;gene=ybgC;go_component=cytoplasm|0005737||IEA;go_function=fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484150.1;locus_tag=JYJ20_RS07900;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_015484150.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 30304 30591 . - . ID=gene-JYJ20_RS07905;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=JYJ20_RS07905 NZ_JAFIRP010000021.1 Protein Homology CDS 30304 30591 . - 0 ID=cds-WP_006249839.1;Parent=gene-JYJ20_RS07905;Dbxref=GenBank:WP_006249839.1;Name=WP_006249839.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249839.1;locus_tag=JYJ20_RS07905;product=cyd operon protein YbgE;protein_id=WP_006249839.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 30591 30689 . - . ID=gene-JYJ20_RS07910;Name=JYJ20_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07910 NZ_JAFIRP010000021.1 Protein Homology CDS 30591 30689 . - 0 ID=cds-WP_006249838.1;Parent=gene-JYJ20_RS07910;Dbxref=GenBank:WP_006249838.1;Name=WP_006249838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249838.1;locus_tag=JYJ20_RS07910;product=CydX/CbdX family cytochrome bd oxidase small subunit;protein_id=WP_006249838.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 30704 31837 . - . ID=gene-JYJ20_RS07915;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=JYJ20_RS07915 NZ_JAFIRP010000021.1 Protein Homology CDS 30704 31837 . - 0 ID=cds-WP_006249837.1;Parent=gene-JYJ20_RS07915;Dbxref=GenBank:WP_006249837.1;Name=WP_006249837.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484677.1;locus_tag=JYJ20_RS07915;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_006249837.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 31850 33400 . - . ID=gene-JYJ20_RS07920;Name=JYJ20_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07920 NZ_JAFIRP010000021.1 Protein Homology CDS 31850 33400 . - 0 ID=cds-WP_006252373.1;Parent=gene-JYJ20_RS07920;Dbxref=GenBank:WP_006252373.1;Name=WP_006252373.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945563.1;locus_tag=JYJ20_RS07920;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_006252373.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 33816 34142 . + . ID=gene-JYJ20_RS07925;Name=JYJ20_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07925 NZ_JAFIRP010000021.1 Protein Homology CDS 33816 34142 . + 0 ID=cds-WP_006249310.1;Parent=gene-JYJ20_RS07925;Dbxref=GenBank:WP_006249310.1;Name=WP_006249310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249310.1;locus_tag=JYJ20_RS07925;product=DUF5339 domain-containing protein;protein_id=WP_006249310.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 34267 35907 . - . ID=gene-JYJ20_RS07930;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=JYJ20_RS07930 NZ_JAFIRP010000021.1 Protein Homology CDS 34267 35907 . - 0 ID=cds-WP_006249309.1;Parent=gene-JYJ20_RS07930;Dbxref=GenBank:WP_006249309.1;Name=WP_006249309.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011608625.1;locus_tag=JYJ20_RS07930;product=chaperonin GroEL;protein_id=WP_006249309.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 35976 36266 . - . ID=gene-JYJ20_RS07935;Name=JYJ20_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07935 NZ_JAFIRP010000021.1 Protein Homology CDS 35976 36266 . - 0 ID=cds-WP_006249308.1;Parent=gene-JYJ20_RS07935;Dbxref=GenBank:WP_006249308.1;Name=WP_006249308.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005578164.1;locus_tag=JYJ20_RS07935;product=co-chaperone GroES;protein_id=WP_006249308.1;transl_table=11 NZ_JAFIRP010000021.1 RefSeq gene 36500 37105 . + . ID=gene-JYJ20_RS07940;Name=JYJ20_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07940 NZ_JAFIRP010000021.1 Protein Homology CDS 36500 37105 . + 0 ID=cds-WP_020824155.1;Parent=gene-JYJ20_RS07940;Dbxref=GenBank:WP_020824155.1;Name=WP_020824155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484148.1;locus_tag=JYJ20_RS07940;product=hypothetical protein;protein_id=WP_020824155.1;transl_table=11 ##sequence-region NZ_JAFIRP010000022.1 1 4173 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000022.1 RefSeq region 1 4173 . + . ID=NZ_JAFIRP010000022.1:1..4173;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000022.1 RefSeq gene 80 706 . - . ID=gene-JYJ20_RS07945;Name=JYJ20_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07945 NZ_JAFIRP010000022.1 Protein Homology CDS 80 706 . - 0 ID=cds-WP_006251306.1;Parent=gene-JYJ20_RS07945;Dbxref=GenBank:WP_006251306.1;Name=WP_006251306.1;Ontology_term=GO:0000287,GO:0016840,GO:0051539,GO:1904047;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,carbon-nitrogen lyase activity|0016840||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251306.1;locus_tag=JYJ20_RS07945;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_006251306.1;transl_table=11 NZ_JAFIRP010000022.1 RefSeq gene 706 1128 . - . ID=gene-JYJ20_RS07950;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=JYJ20_RS07950 NZ_JAFIRP010000022.1 Protein Homology CDS 706 1128 . - 0 ID=cds-WP_006249203.1;Parent=gene-JYJ20_RS07950;Dbxref=GenBank:WP_006249203.1;Name=WP_006249203.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597968.1;locus_tag=JYJ20_RS07950;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_006249203.1;transl_table=11 NZ_JAFIRP010000022.1 RefSeq gene 1121 1789 . - . ID=gene-JYJ20_RS07955;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=JYJ20_RS07955 NZ_JAFIRP010000022.1 Protein Homology CDS 1121 1789 . - 0 ID=cds-WP_006249202.1;Parent=gene-JYJ20_RS07955;Dbxref=GenBank:WP_006249202.1;Name=WP_006249202.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249202.1;locus_tag=JYJ20_RS07955;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_006249202.1;transl_table=11 NZ_JAFIRP010000022.1 cmsearch riboswitch 1793 1837 . - . ID=id-NZ_JAFIRP010000022.1:1793..1837;Dbxref=RFAM:RF00522;Note=PreQ1 riboswitch class I;bound_moiety=preQ1;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAFIRP010000022.1 RefSeq gene 1961 2209 . + . ID=gene-JYJ20_RS07960;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=JYJ20_RS07960 NZ_JAFIRP010000022.1 Protein Homology CDS 1961 2209 . + 0 ID=cds-WP_006249201.1;Parent=gene-JYJ20_RS07960;Dbxref=GenBank:WP_006249201.1;Name=WP_006249201.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249201.1;locus_tag=JYJ20_RS07960;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_006249201.1;transl_table=11 NZ_JAFIRP010000022.1 RefSeq gene 2242 3882 . + . ID=gene-JYJ20_RS07965;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=JYJ20_RS07965 NZ_JAFIRP010000022.1 Protein Homology CDS 2242 3882 . + 0 ID=cds-WP_006249200.1;Parent=gene-JYJ20_RS07965;Dbxref=GenBank:WP_006249200.1;Name=WP_006249200.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013527751.1;locus_tag=JYJ20_RS07965;product=glucose-6-phosphate isomerase;protein_id=WP_006249200.1;transl_table=11 ##sequence-region NZ_JAFIRP010000023.1 1 100344 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000023.1 RefSeq region 1 100344 . + . ID=NZ_JAFIRP010000023.1:1..100344;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000023.1 RefSeq gene 29 105 . - . ID=gene-JYJ20_RS07970;Name=JYJ20_RS07970;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS07970 NZ_JAFIRP010000023.1 tRNAscan-SE tRNA 29 105 . - . ID=rna-JYJ20_RS07970;Parent=gene-JYJ20_RS07970;anticodon=(pos:complement(69..71));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS07970;product=tRNA-Pro NZ_JAFIRP010000023.1 tRNAscan-SE exon 29 105 . - . ID=exon-JYJ20_RS07970-1;Parent=rna-JYJ20_RS07970;anticodon=(pos:complement(69..71));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS07970;product=tRNA-Pro NZ_JAFIRP010000023.1 RefSeq gene 130 205 . - . ID=gene-JYJ20_RS07975;Name=JYJ20_RS07975;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS07975 NZ_JAFIRP010000023.1 tRNAscan-SE tRNA 130 205 . - . ID=rna-JYJ20_RS07975;Parent=gene-JYJ20_RS07975;anticodon=(pos:complement(170..172));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS07975;product=tRNA-His NZ_JAFIRP010000023.1 tRNAscan-SE exon 130 205 . - . ID=exon-JYJ20_RS07975-1;Parent=rna-JYJ20_RS07975;anticodon=(pos:complement(170..172));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS07975;product=tRNA-His NZ_JAFIRP010000023.1 RefSeq gene 235 311 . - . ID=gene-JYJ20_RS07980;Name=JYJ20_RS07980;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS07980 NZ_JAFIRP010000023.1 tRNAscan-SE tRNA 235 311 . - . ID=rna-JYJ20_RS07980;Parent=gene-JYJ20_RS07980;anticodon=(pos:complement(275..277));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS07980;product=tRNA-Arg NZ_JAFIRP010000023.1 tRNAscan-SE exon 235 311 . - . ID=exon-JYJ20_RS07980-1;Parent=rna-JYJ20_RS07980;anticodon=(pos:complement(275..277));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS07980;product=tRNA-Arg NZ_JAFIRP010000023.1 RefSeq gene 471 1193 . - . ID=gene-JYJ20_RS07985;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=JYJ20_RS07985 NZ_JAFIRP010000023.1 Protein Homology CDS 471 1193 . - 0 ID=cds-WP_006248471.1;Parent=gene-JYJ20_RS07985;Dbxref=GenBank:WP_006248471.1;Name=WP_006248471.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248471.1;locus_tag=JYJ20_RS07985;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_006248471.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 1183 2454 . - . ID=gene-JYJ20_RS07990;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=JYJ20_RS07990 NZ_JAFIRP010000023.1 Protein Homology CDS 1183 2454 . - 0 ID=cds-WP_209026145.1;Parent=gene-JYJ20_RS07990;Dbxref=GenBank:WP_209026145.1;Name=WP_209026145.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248470.1;locus_tag=JYJ20_RS07990;product=ECA oligosaccharide polymerase;protein_id=WP_209026145.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 2447 3517 . - . ID=gene-JYJ20_RS07995;Name=JYJ20_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS07995 NZ_JAFIRP010000023.1 Protein Homology CDS 2447 3517 . - 0 ID=cds-WP_032844394.1;Parent=gene-JYJ20_RS07995;Dbxref=GenBank:WP_032844394.1;Name=WP_032844394.1;Ontology_term=GO:0000271,GO:0008417;gbkey=CDS;go_function=fucosyltransferase activity|0008417||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248469.1;locus_tag=JYJ20_RS07995;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase family protein;protein_id=WP_032844394.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 3704 5125 . + . ID=gene-JYJ20_RS08000;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=JYJ20_RS08000 NZ_JAFIRP010000023.1 Protein Homology CDS 3704 5125 . + 0 ID=cds-WP_006248468.1;Parent=gene-JYJ20_RS08000;Dbxref=GenBank:WP_006248468.1;Name=WP_006248468.1;Ontology_term=GO:1901704,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=L-glutamine biosynthetic process|1901704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248468.1;locus_tag=JYJ20_RS08000;product=type I glutamate--ammonia ligase;protein_id=WP_006248468.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 5170 6315 . - . ID=gene-JYJ20_RS08005;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=JYJ20_RS08005 NZ_JAFIRP010000023.1 Protein Homology CDS 5170 6315 . - 0 ID=cds-WP_061888607.1;Parent=gene-JYJ20_RS08005;Dbxref=GenBank:WP_061888607.1;Name=WP_061888607.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose:2-oxoglutarate transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251256.1;locus_tag=JYJ20_RS08005;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_061888607.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 6302 6946 . - . ID=gene-JYJ20_RS08010;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=JYJ20_RS08010 NZ_JAFIRP010000023.1 Protein Homology CDS 6302 6946 . - 0 ID=cds-WP_006248467.1;Parent=gene-JYJ20_RS08010;Dbxref=GenBank:WP_006248467.1;Name=WP_006248467.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251257.1;locus_tag=JYJ20_RS08010;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_006248467.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 6943 8190 . - . ID=gene-JYJ20_RS08015;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=JYJ20_RS08015 NZ_JAFIRP010000023.1 Protein Homology CDS 6943 8190 . - 0 ID=cds-WP_209026146.1;Parent=gene-JYJ20_RS08015;Dbxref=GenBank:WP_209026146.1;Name=WP_209026146.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252585.1;locus_tag=JYJ20_RS08015;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_209026146.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 8231 9043 . - . ID=gene-JYJ20_RS08020;Name=JYJ20_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08020 NZ_JAFIRP010000023.1 Protein Homology CDS 8231 9043 . - 0 ID=cds-WP_006248465.1;Parent=gene-JYJ20_RS08020;Dbxref=GenBank:WP_006248465.1;Name=WP_006248465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248465.1;locus_tag=JYJ20_RS08020;product=LPS chain length-determining protein;protein_id=WP_006248465.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 9054 10118 . - . ID=gene-JYJ20_RS08025;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=JYJ20_RS08025 NZ_JAFIRP010000023.1 Protein Homology CDS 9054 10118 . - 0 ID=cds-WP_006248464.1;Parent=gene-JYJ20_RS08025;Dbxref=GenBank:WP_006248464.1;Name=WP_006248464.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248464.1;locus_tag=JYJ20_RS08025;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_006248464.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 10260 11540 . + . ID=gene-JYJ20_RS08030;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=JYJ20_RS08030 NZ_JAFIRP010000023.1 Protein Homology CDS 10260 11540 . + 0 ID=cds-WP_006248463.1;Parent=gene-JYJ20_RS08030;Dbxref=GenBank:WP_006248463.1;Name=WP_006248463.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613104.1;locus_tag=JYJ20_RS08030;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_006248463.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 11792 13102 . - . ID=gene-JYJ20_RS08035;Name=drt2;gbkey=Gene;gene=drt2;gene_biotype=protein_coding;locus_tag=JYJ20_RS08035 NZ_JAFIRP010000023.1 Protein Homology CDS 11792 13102 . - 0 ID=cds-WP_006248462.1;Parent=gene-JYJ20_RS08035;Dbxref=GenBank:WP_006248462.1;Name=WP_006248462.1;Ontology_term=GO:0051607;gbkey=CDS;gene=drt2;go_process=defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248462.1;locus_tag=JYJ20_RS08035;product=antiviral reverse transcriptase Drt2;protein_id=WP_006248462.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 13497 17780 . - . ID=gene-JYJ20_RS08040;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=JYJ20_RS08040 NZ_JAFIRP010000023.1 Protein Homology CDS 13497 17780 . - 0 ID=cds-WP_006248461.1;Parent=gene-JYJ20_RS08040;Dbxref=GenBank:WP_006248461.1;Name=WP_006248461.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618195.1;locus_tag=JYJ20_RS08040;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_006248461.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 18043 22068 . - . ID=gene-JYJ20_RS08045;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=JYJ20_RS08045 NZ_JAFIRP010000023.1 Protein Homology CDS 18043 22068 . - 0 ID=cds-WP_006251938.1;Parent=gene-JYJ20_RS08045;Dbxref=GenBank:WP_006251938.1;Name=WP_006251938.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252588.1;locus_tag=JYJ20_RS08045;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_006251938.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 22418 23362 . - . ID=gene-JYJ20_RS08050;Name=JYJ20_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08050 NZ_JAFIRP010000023.1 Protein Homology CDS 22418 23362 . - 0 ID=cds-WP_425331223.1;Parent=gene-JYJ20_RS08050;Dbxref=GenBank:WP_425331223.1;Name=WP_425331223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248456.1;locus_tag=JYJ20_RS08050;product=hypothetical protein;protein_id=WP_425331223.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 23432 23707 . - . ID=gene-JYJ20_RS08055;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=JYJ20_RS08055 NZ_JAFIRP010000023.1 Protein Homology CDS 23432 23707 . - 0 ID=cds-WP_006248455.1;Parent=gene-JYJ20_RS08055;Dbxref=GenBank:WP_006248455.1;Name=WP_006248455.1;Ontology_term=GO:0002098,GO:0016782;gbkey=CDS;gene=tusB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248455.1;locus_tag=JYJ20_RS08055;product=sulfurtransferase complex subunit TusB;protein_id=WP_006248455.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 23717 24088 . - . ID=gene-JYJ20_RS08060;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=JYJ20_RS08060 NZ_JAFIRP010000023.1 Protein Homology CDS 23717 24088 . - 0 ID=cds-WP_006248454.1;Parent=gene-JYJ20_RS08060;Dbxref=GenBank:WP_006248454.1;Name=WP_006248454.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248454.1;locus_tag=JYJ20_RS08060;product=sulfurtransferase complex subunit TusC;protein_id=WP_006248454.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 24090 24467 . - . ID=gene-JYJ20_RS08065;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=JYJ20_RS08065 NZ_JAFIRP010000023.1 Protein Homology CDS 24090 24467 . - 0 ID=cds-WP_021279898.1;Parent=gene-JYJ20_RS08065;Dbxref=GenBank:WP_021279898.1;Name=WP_021279898.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263328.1;locus_tag=JYJ20_RS08065;product=sulfurtransferase complex subunit TusD;protein_id=WP_021279898.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 24467 25123 . - . ID=gene-JYJ20_RS08070;Name=JYJ20_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08070 NZ_JAFIRP010000023.1 Protein Homology CDS 24467 25123 . - 0 ID=cds-WP_006248452.1;Parent=gene-JYJ20_RS08070;Dbxref=GenBank:WP_006248452.1;Name=WP_006248452.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248452.1;locus_tag=JYJ20_RS08070;product=helix-turn-helix transcriptional regulator;protein_id=WP_006248452.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 25220 25945 . - . ID=gene-JYJ20_RS08075;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=JYJ20_RS08075 NZ_JAFIRP010000023.1 Protein Homology CDS 25220 25945 . - 0 ID=cds-WP_006248451.1;Parent=gene-JYJ20_RS08075;Dbxref=GenBank:WP_006248451.1;Name=WP_006248451.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248451.1;locus_tag=JYJ20_RS08075;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_006248451.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 26033 26254 . + . ID=gene-JYJ20_RS08080;Name=JYJ20_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08080 NZ_JAFIRP010000023.1 Protein Homology CDS 26033 26254 . + 0 ID=cds-WP_006248450.1;Parent=gene-JYJ20_RS08080;Dbxref=GenBank:WP_006248450.1;Name=WP_006248450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248450.1;locus_tag=JYJ20_RS08080;product=SlyX family protein;protein_id=WP_006248450.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 26312 27004 . + . ID=gene-JYJ20_RS08085;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=JYJ20_RS08085 NZ_JAFIRP010000023.1 Protein Homology CDS 26312 27004 . + 0 ID=cds-WP_006248449.1;Parent=gene-JYJ20_RS08085;Dbxref=GenBank:WP_006248449.1;Name=WP_006248449.1;Ontology_term=GO:0009164,GO:0033353,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine cycle|0033353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248449.1;locus_tag=JYJ20_RS08085;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_006248449.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 27159 28496 . + . ID=gene-JYJ20_RS08090;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=JYJ20_RS08090 NZ_JAFIRP010000023.1 Protein Homology CDS 27159 28496 . + 0 ID=cds-WP_209026147.1;Parent=gene-JYJ20_RS08090;Dbxref=GenBank:WP_209026147.1;Name=WP_209026147.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252589.1;locus_tag=JYJ20_RS08090;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_209026147.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 28506 30515 . + . ID=gene-JYJ20_RS08095;Name=JYJ20_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08095 NZ_JAFIRP010000023.1 Protein Homology CDS 28506 30515 . + 0 ID=cds-WP_006251935.1;Parent=gene-JYJ20_RS08095;Dbxref=GenBank:WP_006251935.1;Name=WP_006251935.1;Ontology_term=GO:0006487,GO:0035251;gbkey=CDS;go_function=UDP-glucosyltransferase activity|0035251||IEA;go_process=protein N-linked glycosylation|0006487||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248446.1;locus_tag=JYJ20_RS08095;product=UDP-glucose:protein N-beta-glucosyltransferase;protein_id=WP_006251935.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq pseudogene 30594 31851 . - . ID=gene-JYJ20_RS08100;Name=JYJ20_RS08100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS08100;pseudo=true NZ_JAFIRP010000023.1 Protein Homology CDS 30594 31851 . - 0 ID=cds-JYJ20_RS08100;Parent=gene-JYJ20_RS08100;Note=frameshifted;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005760733.1;locus_tag=JYJ20_RS08100;product=NupC/NupG family nucleoside CNT transporter;pseudo=true;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 31864 32652 . - . ID=gene-JYJ20_RS08105;Name=JYJ20_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08105 NZ_JAFIRP010000023.1 Protein Homology CDS 31864 32652 . - 0 ID=cds-WP_006248445.1;Parent=gene-JYJ20_RS08105;Dbxref=GenBank:WP_006248445.1;Name=WP_006248445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248445.1;locus_tag=JYJ20_RS08105;product=4Fe-4S cluster-binding domain-containing protein;protein_id=WP_006248445.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq pseudogene 32655 34185 . - . ID=gene-JYJ20_RS08110;Name=JYJ20_RS08110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS08110;pseudo=true NZ_JAFIRP010000023.1 Protein Homology CDS 32655 34185 . - 0 ID=cds-JYJ20_RS08110;Parent=gene-JYJ20_RS08110;Note=frameshifted;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252591.1;locus_tag=JYJ20_RS08110;product=YjjI family glycine radical enzyme;pseudo=true;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 34411 35241 . + . ID=gene-JYJ20_RS08115;Name=JYJ20_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08115 NZ_JAFIRP010000023.1 Protein Homology CDS 34411 35241 . + 0 ID=cds-WP_006251930.1;Parent=gene-JYJ20_RS08115;Dbxref=GenBank:WP_006251930.1;Name=WP_006251930.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251930.1;locus_tag=JYJ20_RS08115;product=alpha/beta hydrolase;protein_id=WP_006251930.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 35348 35716 . - . ID=gene-JYJ20_RS08120;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=JYJ20_RS08120 NZ_JAFIRP010000023.1 Protein Homology CDS 35348 35716 . - 0 ID=cds-WP_006248748.1;Parent=gene-JYJ20_RS08120;Dbxref=GenBank:WP_006248748.1;Name=WP_006248748.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599214.1;locus_tag=JYJ20_RS08120;product=50S ribosomal protein L7/L12;protein_id=WP_006248748.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 35775 36266 . - . ID=gene-JYJ20_RS08125;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=JYJ20_RS08125 NZ_JAFIRP010000023.1 Protein Homology CDS 35775 36266 . - 0 ID=cds-WP_006248749.1;Parent=gene-JYJ20_RS08125;Dbxref=GenBank:WP_006248749.1;Name=WP_006248749.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005694693.1;locus_tag=JYJ20_RS08125;product=50S ribosomal protein L10;protein_id=WP_006248749.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 36547 36762 . - . ID=gene-JYJ20_RS08130;Name=JYJ20_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08130 NZ_JAFIRP010000023.1 Protein Homology CDS 36547 36762 . - 0 ID=cds-WP_006252593.1;Parent=gene-JYJ20_RS08130;Dbxref=GenBank:WP_006252593.1;Name=WP_006252593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252593.1;locus_tag=JYJ20_RS08130;product=hypothetical protein;protein_id=WP_006252593.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 36811 37953 . - . ID=gene-JYJ20_RS08135;Name=JYJ20_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08135 NZ_JAFIRP010000023.1 Protein Homology CDS 36811 37953 . - 0 ID=cds-WP_006248750.1;Parent=gene-JYJ20_RS08135;Dbxref=GenBank:WP_006248750.1;Name=WP_006248750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252594.1;locus_tag=JYJ20_RS08135;product=beta-ketoacyl-ACP synthase III;protein_id=WP_006248750.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 37976 38560 . - . ID=gene-JYJ20_RS12510;Name=JYJ20_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12510 NZ_JAFIRP010000023.1 GeneMarkS-2+ CDS 37976 38560 . - 0 ID=cds-WP_230269086.1;Parent=gene-JYJ20_RS12510;Dbxref=GenBank:WP_230269086.1;Name=WP_230269086.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS12510;product=hypothetical protein;protein_id=WP_230269086.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 38554 38880 . - . ID=gene-JYJ20_RS12515;Name=JYJ20_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12515 NZ_JAFIRP010000023.1 GeneMarkS-2+ CDS 38554 38880 . - 0 ID=cds-WP_015484018.1;Parent=gene-JYJ20_RS12515;Dbxref=GenBank:WP_015484018.1;Name=WP_015484018.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS12515;product=NADPH-dependent FMN reductase family protein;protein_id=WP_015484018.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 38894 40039 . - . ID=gene-JYJ20_RS08145;Name=JYJ20_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08145 NZ_JAFIRP010000023.1 Protein Homology CDS 38894 40039 . - 0 ID=cds-WP_044427547.1;Parent=gene-JYJ20_RS08145;Dbxref=GenBank:WP_044427547.1;Name=WP_044427547.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015433600.1;locus_tag=JYJ20_RS08145;product=beta-ketoacyl-ACP synthase;protein_id=WP_044427547.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 40102 40830 . - . ID=gene-JYJ20_RS08150;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=JYJ20_RS08150 NZ_JAFIRP010000023.1 Protein Homology CDS 40102 40830 . - 0 ID=cds-WP_006248752.1;Parent=gene-JYJ20_RS08150;Dbxref=GenBank:WP_006248752.1;Name=WP_006248752.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fabG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012771807.1;locus_tag=JYJ20_RS08150;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_006248752.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 40844 42277 . - . ID=gene-JYJ20_RS08155;Name=JYJ20_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08155 NZ_JAFIRP010000023.1 Protein Homology CDS 40844 42277 . - 0 ID=cds-WP_006248753.1;Parent=gene-JYJ20_RS08155;Dbxref=GenBank:WP_006248753.1;Name=WP_006248753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251924.1;locus_tag=JYJ20_RS08155;product=ATP-binding protein;protein_id=WP_006248753.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 42272 42472 . + . ID=gene-JYJ20_RS08160;Name=JYJ20_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08160 NZ_JAFIRP010000023.1 GeneMarkS-2+ CDS 42272 42472 . + 0 ID=cds-WP_209026148.1;Parent=gene-JYJ20_RS08160;Dbxref=GenBank:WP_209026148.1;Name=WP_209026148.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS08160;product=hypothetical protein;protein_id=WP_209026148.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 42437 42877 . - . ID=gene-JYJ20_RS08165;Name=JYJ20_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08165 NZ_JAFIRP010000023.1 Protein Homology CDS 42437 42877 . - 0 ID=cds-WP_006251923.1;Parent=gene-JYJ20_RS08165;Dbxref=GenBank:WP_006251923.1;Name=WP_006251923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248754.1;locus_tag=JYJ20_RS08165;product=hotdog family protein;protein_id=WP_006251923.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq pseudogene 42870 44092 . - . ID=gene-JYJ20_RS08170;Name=JYJ20_RS08170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS08170;pseudo=true NZ_JAFIRP010000023.1 Protein Homology CDS 42870 44092 . - 0 ID=cds-JYJ20_RS08170;Parent=gene-JYJ20_RS08170;Note=frameshifted;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005544283.1;locus_tag=JYJ20_RS08170;product=beta-ketoacyl-ACP synthase;pseudo=true;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 44179 44598 . - . ID=gene-JYJ20_RS08175;Name=JYJ20_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08175 NZ_JAFIRP010000023.1 Protein Homology CDS 44179 44598 . - 0 ID=cds-WP_209026149.1;Parent=gene-JYJ20_RS08175;Dbxref=GenBank:WP_209026149.1;Name=WP_209026149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248756.1;locus_tag=JYJ20_RS08175;product=hypothetical protein;protein_id=WP_209026149.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 44660 45349 . - . ID=gene-JYJ20_RS08180;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=JYJ20_RS08180 NZ_JAFIRP010000023.1 Protein Homology CDS 44660 45349 . - 0 ID=cds-WP_025218160.1;Parent=gene-JYJ20_RS08180;Dbxref=GenBank:WP_025218160.1;Name=WP_025218160.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018356869.1;locus_tag=JYJ20_RS08180;product=50S ribosomal protein L1;protein_id=WP_025218160.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 45354 45782 . - . ID=gene-JYJ20_RS08185;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=JYJ20_RS08185 NZ_JAFIRP010000023.1 Protein Homology CDS 45354 45782 . - 0 ID=cds-WP_154703530.1;Parent=gene-JYJ20_RS08185;Dbxref=GenBank:WP_154703530.1;Name=WP_154703530.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=JYJ20_RS08185;product=50S ribosomal protein L11;protein_id=WP_154703530.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 46017 46580 . - . ID=gene-JYJ20_RS08190;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=JYJ20_RS08190 NZ_JAFIRP010000023.1 Protein Homology CDS 46017 46580 . - 0 ID=cds-WP_006248760.1;Parent=gene-JYJ20_RS08190;Dbxref=GenBank:WP_006248760.1;Name=WP_006248760.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599210.1;locus_tag=JYJ20_RS08190;product=transcription termination/antitermination protein NusG;protein_id=WP_006248760.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 46582 46995 . - . ID=gene-JYJ20_RS08195;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=JYJ20_RS08195 NZ_JAFIRP010000023.1 Protein Homology CDS 46582 46995 . - 0 ID=cds-WP_006248761.1;Parent=gene-JYJ20_RS08195;Dbxref=GenBank:WP_006248761.1;Name=WP_006248761.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652158.1;locus_tag=JYJ20_RS08195;product=preprotein translocase subunit SecE;protein_id=WP_006248761.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 47108 48130 . - . ID=gene-JYJ20_RS08200;Name=JYJ20_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08200 NZ_JAFIRP010000023.1 Protein Homology CDS 47108 48130 . - 0 ID=cds-WP_006251921.1;Parent=gene-JYJ20_RS08200;Dbxref=GenBank:WP_006251921.1;Name=WP_006251921.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248762.1;locus_tag=JYJ20_RS08200;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_006251921.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 48361 48630 . + . ID=gene-JYJ20_RS08205;Name=JYJ20_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08205 NZ_JAFIRP010000023.1 Protein Homology CDS 48361 48630 . + 0 ID=cds-WP_006248763.1;Parent=gene-JYJ20_RS08205;Dbxref=GenBank:WP_006248763.1;Name=WP_006248763.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005540356.1;locus_tag=JYJ20_RS08205;product=PTS sugar transporter subunit IIB;protein_id=WP_006248763.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 48643 49998 . + . ID=gene-JYJ20_RS08210;Name=JYJ20_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08210 NZ_JAFIRP010000023.1 Protein Homology CDS 48643 49998 . + 0 ID=cds-WP_209026150.1;Parent=gene-JYJ20_RS08210;Dbxref=GenBank:WP_209026150.1;Name=WP_209026150.1;Ontology_term=GO:0009401;gbkey=CDS;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251920.1;locus_tag=JYJ20_RS08210;product=PTS ascorbate transporter subunit IIC;protein_id=WP_209026150.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq pseudogene 50093 51237 . - . ID=gene-JYJ20_RS08215;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=pseudogene;locus_tag=JYJ20_RS08215;pseudo=true NZ_JAFIRP010000023.1 Protein Homology CDS 50093 51237 . - 0 ID=cds-JYJ20_RS08215;Parent=gene-JYJ20_RS08215;Note=frameshifted;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248764.1;locus_tag=JYJ20_RS08215;product=DNA-processing protein DprA;pseudo=true;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 51326 51838 . + . ID=gene-JYJ20_RS08220;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=JYJ20_RS08220 NZ_JAFIRP010000023.1 Protein Homology CDS 51326 51838 . + 0 ID=cds-WP_006248765.1;Parent=gene-JYJ20_RS08220;Dbxref=GenBank:WP_006248765.1;Name=WP_006248765.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005621146.1;locus_tag=JYJ20_RS08220;product=peptide deformylase;protein_id=WP_006248765.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 51932 52858 . + . ID=gene-JYJ20_RS08225;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=JYJ20_RS08225 NZ_JAFIRP010000023.1 Protein Homology CDS 51932 52858 . + 0 ID=cds-WP_006248766.1;Parent=gene-JYJ20_RS08225;Dbxref=GenBank:WP_006248766.1;Name=WP_006248766.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005712668.1;locus_tag=JYJ20_RS08225;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_006248766.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 52926 53456 . - . ID=gene-JYJ20_RS08230;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=JYJ20_RS08230 NZ_JAFIRP010000023.1 Protein Homology CDS 52926 53456 . - 0 ID=cds-WP_006248767.1;Parent=gene-JYJ20_RS08230;Dbxref=GenBank:WP_006248767.1;Name=WP_006248767.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017807287.1;locus_tag=JYJ20_RS08230;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_006248767.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 53569 55206 . - . ID=gene-JYJ20_RS08235;Name=JYJ20_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08235 NZ_JAFIRP010000023.1 Protein Homology CDS 53569 55206 . - 0 ID=cds-WP_006248768.1;Parent=gene-JYJ20_RS08235;Dbxref=GenBank:WP_006248768.1;Name=WP_006248768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248768.1;locus_tag=JYJ20_RS08235;product=AAA family ATPase;protein_id=WP_006248768.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 55299 55745 . + . ID=gene-JYJ20_RS08240;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=JYJ20_RS08240 NZ_JAFIRP010000023.1 Protein Homology CDS 55299 55745 . + 0 ID=cds-WP_006248769.1;Parent=gene-JYJ20_RS08240;Dbxref=GenBank:WP_006248769.1;Name=WP_006248769.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944225.1;locus_tag=JYJ20_RS08240;product=macrodomain Ter protein MatP;protein_id=WP_006248769.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 55811 56947 . - . ID=gene-JYJ20_RS08245;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=JYJ20_RS08245 NZ_JAFIRP010000023.1 Protein Homology CDS 55811 56947 . - 0 ID=cds-WP_040080544.1;Parent=gene-JYJ20_RS08245;Dbxref=GenBank:WP_040080544.1;Name=WP_040080544.1;gbkey=CDS;gene=ompA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_119863613.1;locus_tag=JYJ20_RS08245;product=porin OmpA;protein_id=WP_040080544.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 57370 60462 . + . ID=gene-JYJ20_RS08250;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=JYJ20_RS08250 NZ_JAFIRP010000023.1 Protein Homology CDS 57370 60462 . + 0 ID=cds-WP_006250309.1;Parent=gene-JYJ20_RS08250;Dbxref=GenBank:WP_006250309.1;Name=WP_006250309.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263228.1;locus_tag=JYJ20_RS08250;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_006250309.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 60791 61216 . + . ID=gene-JYJ20_RS08255;Name=JYJ20_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08255 NZ_JAFIRP010000023.1 Protein Homology CDS 60791 61216 . + 0 ID=cds-WP_006251915.1;Parent=gene-JYJ20_RS08255;Dbxref=GenBank:WP_006251915.1;Name=WP_006251915.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598632.1;locus_tag=JYJ20_RS08255;product=hotdog fold thioesterase;protein_id=WP_006251915.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 61369 62994 . + . ID=gene-JYJ20_RS08260;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=JYJ20_RS08260 NZ_JAFIRP010000023.1 Protein Homology CDS 61369 62994 . + 0 ID=cds-WP_006250337.1;Parent=gene-JYJ20_RS08260;Dbxref=GenBank:WP_006250337.1;Name=WP_006250337.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250337.1;locus_tag=JYJ20_RS08260;product=membrane protein insertase YidC;protein_id=WP_006250337.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 63079 63576 . - . ID=gene-JYJ20_RS08265;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=JYJ20_RS08265 NZ_JAFIRP010000023.1 Protein Homology CDS 63079 63576 . - 0 ID=cds-WP_006250338.1;Parent=gene-JYJ20_RS08265;Dbxref=GenBank:WP_006250338.1;Name=WP_006250338.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250338.1;locus_tag=JYJ20_RS08265;product=thiol peroxidase;protein_id=WP_006250338.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 63723 64457 . + . ID=gene-JYJ20_RS08270;Name=JYJ20_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08270 NZ_JAFIRP010000023.1 Protein Homology CDS 63723 64457 . + 0 ID=cds-WP_006250339.1;Parent=gene-JYJ20_RS08270;Dbxref=GenBank:WP_006250339.1;Name=WP_006250339.1;Ontology_term=GO:0008654,GO:0003841,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=1-acylglycerol-3-phosphate O-acyltransferase activity|0003841||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250339.1;locus_tag=JYJ20_RS08270;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_006250339.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 64459 65883 . + . ID=gene-JYJ20_RS08275;Name=JYJ20_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08275 NZ_JAFIRP010000023.1 Protein Homology CDS 64459 65883 . + 0 ID=cds-WP_006250340.1;Parent=gene-JYJ20_RS08275;Dbxref=GenBank:WP_006250340.1;Name=WP_006250340.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250340.1;locus_tag=JYJ20_RS08275;product=multicopper oxidase domain-containing protein;protein_id=WP_006250340.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 65937 66890 . + . ID=gene-JYJ20_RS08280;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=JYJ20_RS08280 NZ_JAFIRP010000023.1 Protein Homology CDS 65937 66890 . + 0 ID=cds-WP_006250341.1;Parent=gene-JYJ20_RS08280;Dbxref=GenBank:WP_006250341.1;Name=WP_006250341.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598724.1;locus_tag=JYJ20_RS08280;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_006250341.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 66985 67060 . - . ID=gene-JYJ20_RS08285;Name=JYJ20_RS08285;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS08285 NZ_JAFIRP010000023.1 tRNAscan-SE tRNA 66985 67060 . - . ID=rna-JYJ20_RS08285;Parent=gene-JYJ20_RS08285;anticodon=(pos:complement(67025..67027));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS08285;product=tRNA-Thr NZ_JAFIRP010000023.1 tRNAscan-SE exon 66985 67060 . - . ID=exon-JYJ20_RS08285-1;Parent=rna-JYJ20_RS08285;anticodon=(pos:complement(67025..67027));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS08285;product=tRNA-Thr NZ_JAFIRP010000023.1 RefSeq gene 67179 68039 . + . ID=gene-JYJ20_RS08290;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=JYJ20_RS08290 NZ_JAFIRP010000023.1 Protein Homology CDS 67179 68039 . + 0 ID=cds-WP_209026151.1;Parent=gene-JYJ20_RS08290;Dbxref=GenBank:WP_209026151.1;Name=WP_209026151.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005721193.1;locus_tag=JYJ20_RS08290;product=pyridoxal kinase PdxY;protein_id=WP_209026151.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 68126 68941 . - . ID=gene-JYJ20_RS08295;Name=JYJ20_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08295 NZ_JAFIRP010000023.1 Protein Homology CDS 68126 68941 . - 0 ID=cds-WP_075271724.1;Parent=gene-JYJ20_RS08295;Dbxref=GenBank:WP_075271724.1;Name=WP_075271724.1;Ontology_term=GO:0015474,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=autotransporter activity|0015474||IEA;inference=COORDINATES: protein motif:HMM:TIGR01414.1;locus_tag=JYJ20_RS08295;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_075271724.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 68951 69541 . - . ID=gene-JYJ20_RS08300;Name=JYJ20_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08300 NZ_JAFIRP010000023.1 Protein Homology CDS 68951 69541 . - 0 ID=cds-WP_342365906.1;Parent=gene-JYJ20_RS08300;Dbxref=GenBank:WP_342365906.1;Name=WP_342365906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251910.1;locus_tag=JYJ20_RS08300;product=serine protease;protein_id=WP_342365906.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 69541 71478 . - . ID=gene-JYJ20_RS08305;Name=JYJ20_RS08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08305 NZ_JAFIRP010000023.1 Protein Homology CDS 69541 71478 . - 0 ID=cds-WP_209026152.1;Parent=gene-JYJ20_RS08305;Dbxref=GenBank:WP_209026152.1;Name=WP_209026152.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012311.7;locus_tag=JYJ20_RS08305;product=S8 family peptidase;protein_id=WP_209026152.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 71705 72424 . - . ID=gene-JYJ20_RS08310;Name=JYJ20_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08310 NZ_JAFIRP010000023.1 Protein Homology CDS 71705 72424 . - 0 ID=cds-WP_006250343.1;Parent=gene-JYJ20_RS08310;Dbxref=GenBank:WP_006250343.1;Name=WP_006250343.1;Ontology_term=GO:0019569,GO:0008270,GO:0008742,GO:0016832;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,L-ribulose-phosphate 4-epimerase activity|0008742||IEA,aldehyde-lyase activity|0016832||IEA;go_process=L-arabinose catabolic process to D-xylulose 5-phosphate|0019569||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250343.1;locus_tag=JYJ20_RS08310;product=L-ribulose-5-phosphate 4-epimerase;protein_id=WP_006250343.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 72421 73281 . - . ID=gene-JYJ20_RS08315;Name=JYJ20_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08315 NZ_JAFIRP010000023.1 Protein Homology CDS 72421 73281 . - 0 ID=cds-WP_006250344.1;Parent=gene-JYJ20_RS08315;Dbxref=GenBank:WP_006250344.1;Name=WP_006250344.1;Ontology_term=GO:0005975,GO:0016861;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250344.1;locus_tag=JYJ20_RS08315;product=L-ribulose-5-phosphate 3-epimerase;protein_id=WP_006250344.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 73336 74082 . - . ID=gene-JYJ20_RS08320;Name=ulaR;gbkey=Gene;gene=ulaR;gene_biotype=protein_coding;locus_tag=JYJ20_RS08320 NZ_JAFIRP010000023.1 Protein Homology CDS 73336 74082 . - 0 ID=cds-WP_006250345.1;Parent=gene-JYJ20_RS08320;Dbxref=GenBank:WP_006250345.1;Name=WP_006250345.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ulaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251181.1;locus_tag=JYJ20_RS08320;product=HTH-type transcriptional regulator UlaR;protein_id=WP_006250345.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 74166 75257 . - . ID=gene-JYJ20_RS08325;Name=ulaG;gbkey=Gene;gene=ulaG;gene_biotype=protein_coding;locus_tag=JYJ20_RS08325 NZ_JAFIRP010000023.1 Protein Homology CDS 74166 75257 . - 0 ID=cds-WP_006253601.1;Parent=gene-JYJ20_RS08325;Dbxref=GenBank:WP_006253601.1;Name=WP_006253601.1;Ontology_term=GO:0019854,GO:0030145,GO:0035460;gbkey=CDS;gene=ulaG;go_function=manganese ion binding|0030145||IEA,L-ascorbate 6-phosphate lactonase activity|0035460||IEA;go_process=L-ascorbic acid catabolic process|0019854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005820876.1;locus_tag=JYJ20_RS08325;product=L-ascorbate 6-phosphate lactonase;protein_id=WP_006253601.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq pseudogene 75640 76011 . + . ID=gene-JYJ20_RS08330;Name=JYJ20_RS08330;end_range=76011,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS08330;partial=true;pseudo=true NZ_JAFIRP010000023.1 Protein Homology CDS 75640 76011 . + 0 ID=cds-JYJ20_RS08330;Parent=gene-JYJ20_RS08330;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009401,GO:0016020;end_range=76011,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249346.1;locus_tag=JYJ20_RS08330;partial=true;product=PTS transporter subunit IIC;pseudo=true;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 75990 77630 . + . ID=gene-JYJ20_RS08335;Name=JYJ20_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08335 NZ_JAFIRP010000023.1 Protein Homology CDS 75990 77630 . + 0 ID=cds-WP_209026159.1;Parent=gene-JYJ20_RS08335;Dbxref=GenBank:WP_209026159.1;Name=WP_209026159.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005694800.1;locus_tag=JYJ20_RS08335;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_209026159.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 77646 78113 . + . ID=gene-JYJ20_RS08340;Name=JYJ20_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08340 NZ_JAFIRP010000023.1 Protein Homology CDS 77646 78113 . + 0 ID=cds-WP_061887216.1;Parent=gene-JYJ20_RS08340;Dbxref=GenBank:WP_061887216.1;Name=WP_061887216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249347.1;locus_tag=JYJ20_RS08340;product=PTS sugar transporter subunit IIA;protein_id=WP_061887216.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 78190 78870 . + . ID=gene-JYJ20_RS08345;Name=JYJ20_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08345 NZ_JAFIRP010000023.1 Protein Homology CDS 78190 78870 . + 0 ID=cds-WP_209026153.1;Parent=gene-JYJ20_RS08345;Dbxref=GenBank:WP_209026153.1;Name=WP_209026153.1;Ontology_term=GO:0000287,GO:0016831;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251174.1;locus_tag=JYJ20_RS08345;product=3-keto-L-gulonate-6-phosphate decarboxylase UlaD;protein_id=WP_209026153.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 78949 80091 . - . ID=gene-JYJ20_RS08350;Name=JYJ20_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08350 NZ_JAFIRP010000023.1 Protein Homology CDS 78949 80091 . - 0 ID=cds-WP_061887218.1;Parent=gene-JYJ20_RS08350;Dbxref=GenBank:WP_061887218.1;Name=WP_061887218.1;Ontology_term=GO:0005524,GO:0008887;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249349.1;locus_tag=JYJ20_RS08350;product=glycerate kinase;protein_id=WP_061887218.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 80101 81480 . - . ID=gene-JYJ20_RS08355;Name=JYJ20_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08355 NZ_JAFIRP010000023.1 Protein Homology CDS 80101 81480 . - 0 ID=cds-WP_040080530.1;Parent=gene-JYJ20_RS08355;Dbxref=GenBank:WP_040080530.1;Name=WP_040080530.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005757929.1;locus_tag=JYJ20_RS08355;product=GntP family permease;protein_id=WP_040080530.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 81602 82696 . - . ID=gene-JYJ20_RS08360;Name=JYJ20_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08360 NZ_JAFIRP010000023.1 Protein Homology CDS 81602 82696 . - 0 ID=cds-WP_040080529.1;Parent=gene-JYJ20_RS08360;Dbxref=GenBank:WP_040080529.1;Name=WP_040080529.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249351.1;locus_tag=JYJ20_RS08360;product=CdaR family transcriptional regulator;protein_id=WP_040080529.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 82800 83252 . - . ID=gene-JYJ20_RS08365;Name=JYJ20_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08365 NZ_JAFIRP010000023.1 Protein Homology CDS 82800 83252 . - 0 ID=cds-WP_006249352.1;Parent=gene-JYJ20_RS08365;Dbxref=GenBank:WP_006249352.1;Name=WP_006249352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251170.1;locus_tag=JYJ20_RS08365;product=DUF302 domain-containing protein;protein_id=WP_006249352.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 83273 84025 . - . ID=gene-JYJ20_RS08370;Name=JYJ20_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08370 NZ_JAFIRP010000023.1 Protein Homology CDS 83273 84025 . - 0 ID=cds-WP_006249353.1;Parent=gene-JYJ20_RS08370;Dbxref=GenBank:WP_006249353.1;Name=WP_006249353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650716.1;locus_tag=JYJ20_RS08370;product=esterase family protein;protein_id=WP_006249353.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 84036 85220 . - . ID=gene-JYJ20_RS08375;Name=JYJ20_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08375 NZ_JAFIRP010000023.1 Protein Homology CDS 84036 85220 . - 0 ID=cds-WP_061887219.1;Parent=gene-JYJ20_RS08375;Dbxref=GenBank:WP_061887219.1;Name=WP_061887219.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602767.1;locus_tag=JYJ20_RS08375;product=ATP-grasp domain-containing protein;protein_id=WP_061887219.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq pseudogene 85513 85943 . + . ID=gene-JYJ20_RS08380;Name=JYJ20_RS08380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS08380;pseudo=true NZ_JAFIRP010000023.1 Protein Homology CDS 85513 85943 . + 0 ID=cds-JYJ20_RS08380;Parent=gene-JYJ20_RS08380;Note=frameshifted;Ontology_term=GO:0007165,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251168.1;locus_tag=JYJ20_RS08380;product=PAS domain-containing protein;pseudo=true;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 86014 87570 . + . ID=gene-JYJ20_RS08385;Name=JYJ20_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08385 NZ_JAFIRP010000023.1 Protein Homology CDS 86014 87570 . + 0 ID=cds-WP_061887220.1;Parent=gene-JYJ20_RS08385;Dbxref=GenBank:WP_061887220.1;Name=WP_061887220.1;Ontology_term=GO:0009055,GO:0010181,GO:0016491,GO:0050660,GO:0050661;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251167.1;locus_tag=JYJ20_RS08385;product=diflavin oxidoreductase;protein_id=WP_061887220.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 87628 87885 . - . ID=gene-JYJ20_RS08390;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=JYJ20_RS08390 NZ_JAFIRP010000023.1 Protein Homology CDS 87628 87885 . - 0 ID=cds-WP_006249356.1;Parent=gene-JYJ20_RS08390;Dbxref=GenBank:WP_006249356.1;Name=WP_006249356.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005759643.1;locus_tag=JYJ20_RS08390;product=30S ribosomal protein S17;protein_id=WP_006249356.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 87885 88076 . - . ID=gene-JYJ20_RS08395;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=JYJ20_RS08395 NZ_JAFIRP010000023.1 Protein Homology CDS 87885 88076 . - 0 ID=cds-WP_005711179.1;Parent=gene-JYJ20_RS08395;Dbxref=GenBank:WP_005711179.1;Name=WP_005711179.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599295.1;locus_tag=JYJ20_RS08395;product=50S ribosomal protein L29;protein_id=WP_005711179.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 88076 88486 . - . ID=gene-JYJ20_RS08400;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=JYJ20_RS08400 NZ_JAFIRP010000023.1 Protein Homology CDS 88076 88486 . - 0 ID=cds-WP_006249357.1;Parent=gene-JYJ20_RS08400;Dbxref=GenBank:WP_006249357.1;Name=WP_006249357.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=JYJ20_RS08400;product=50S ribosomal protein L16;protein_id=WP_006249357.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 88500 89207 . - . ID=gene-JYJ20_RS08405;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=JYJ20_RS08405 NZ_JAFIRP010000023.1 Protein Homology CDS 88500 89207 . - 0 ID=cds-WP_061887221.1;Parent=gene-JYJ20_RS08405;Dbxref=GenBank:WP_061887221.1;Name=WP_061887221.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945716.1;locus_tag=JYJ20_RS08405;product=30S ribosomal protein S3;protein_id=WP_061887221.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 89227 89559 . - . ID=gene-JYJ20_RS08410;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=JYJ20_RS08410 NZ_JAFIRP010000023.1 Protein Homology CDS 89227 89559 . - 0 ID=cds-WP_006249359.1;Parent=gene-JYJ20_RS08410;Dbxref=GenBank:WP_006249359.1;Name=WP_006249359.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=JYJ20_RS08410;product=50S ribosomal protein L22;protein_id=WP_006249359.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 89570 89845 . - . ID=gene-JYJ20_RS08415;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=JYJ20_RS08415 NZ_JAFIRP010000023.1 Protein Homology CDS 89570 89845 . - 0 ID=cds-WP_005539416.1;Parent=gene-JYJ20_RS08415;Dbxref=GenBank:WP_005539416.1;Name=WP_005539416.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013745959.1;locus_tag=JYJ20_RS08415;product=30S ribosomal protein S19;protein_id=WP_005539416.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 89876 90697 . - . ID=gene-JYJ20_RS08420;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=JYJ20_RS08420 NZ_JAFIRP010000023.1 Protein Homology CDS 89876 90697 . - 0 ID=cds-WP_006249360.1;Parent=gene-JYJ20_RS08420;Dbxref=GenBank:WP_006249360.1;Name=WP_006249360.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805226.1;locus_tag=JYJ20_RS08420;product=50S ribosomal protein L2;protein_id=WP_006249360.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 90716 91021 . - . ID=gene-JYJ20_RS08425;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=JYJ20_RS08425 NZ_JAFIRP010000023.1 Protein Homology CDS 90716 91021 . - 0 ID=cds-WP_006249361.1;Parent=gene-JYJ20_RS08425;Dbxref=GenBank:WP_006249361.1;Name=WP_006249361.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005818317.1;locus_tag=JYJ20_RS08425;product=50S ribosomal protein L23;protein_id=WP_006249361.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 91018 91620 . - . ID=gene-JYJ20_RS08430;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=JYJ20_RS08430 NZ_JAFIRP010000023.1 Protein Homology CDS 91018 91620 . - 0 ID=cds-WP_209026154.1;Parent=gene-JYJ20_RS08430;Dbxref=GenBank:WP_209026154.1;Name=WP_209026154.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652707.1;locus_tag=JYJ20_RS08430;product=50S ribosomal protein L4;protein_id=WP_209026154.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 91636 92265 . - . ID=gene-JYJ20_RS08435;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=JYJ20_RS08435 NZ_JAFIRP010000023.1 Protein Homology CDS 91636 92265 . - 0 ID=cds-WP_006249363.1;Parent=gene-JYJ20_RS08435;Dbxref=GenBank:WP_006249363.1;Name=WP_006249363.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005632753.1;locus_tag=JYJ20_RS08435;product=50S ribosomal protein L3;protein_id=WP_006249363.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 92291 92602 . - . ID=gene-JYJ20_RS08440;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=JYJ20_RS08440 NZ_JAFIRP010000023.1 Protein Homology CDS 92291 92602 . - 0 ID=cds-WP_001181005.1;Parent=gene-JYJ20_RS08440;Dbxref=GenBank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=JYJ20_RS08440;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 93046 93684 . + . ID=gene-JYJ20_RS08445;Name=JYJ20_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08445 NZ_JAFIRP010000023.1 Protein Homology CDS 93046 93684 . + 0 ID=cds-WP_209026155.1;Parent=gene-JYJ20_RS08445;Dbxref=GenBank:WP_209026155.1;Name=WP_209026155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251165.1;locus_tag=JYJ20_RS08445;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_209026155.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 93845 95239 . + . ID=gene-JYJ20_RS08450;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=JYJ20_RS08450 NZ_JAFIRP010000023.1 Protein Homology CDS 93845 95239 . + 0 ID=cds-WP_006251164.1;Parent=gene-JYJ20_RS08450;Dbxref=GenBank:WP_006251164.1;Name=WP_006251164.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005567406.1;locus_tag=JYJ20_RS08450;product=class II fumarate hydratase;protein_id=WP_006251164.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 95366 95476 . + . ID=gene-JYJ20_RS08455;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=JYJ20_RS08455 NZ_JAFIRP010000023.1 Protein Homology CDS 95366 95476 . + 0 ID=cds-WP_006248213.1;Parent=gene-JYJ20_RS08455;Dbxref=GenBank:WP_006248213.1;Name=WP_006248213.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005696979.1;locus_tag=JYJ20_RS08455;product=LPS translocon maturation chaperone LptM;protein_id=WP_006248213.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 95581 96831 . + . ID=gene-JYJ20_RS08460;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=JYJ20_RS08460 NZ_JAFIRP010000023.1 Protein Homology CDS 95581 96831 . + 0 ID=cds-WP_006248214.1;Parent=gene-JYJ20_RS08460;Dbxref=GenBank:WP_006248214.1;Name=WP_006248214.1;Ontology_term=GO:0009085,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620569.1;locus_tag=JYJ20_RS08460;product=diaminopimelate decarboxylase;protein_id=WP_006248214.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 96845 97474 . + . ID=gene-JYJ20_RS08465;Name=JYJ20_RS08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08465 NZ_JAFIRP010000023.1 Protein Homology CDS 96845 97474 . + 0 ID=cds-WP_209026156.1;Parent=gene-JYJ20_RS08465;Dbxref=GenBank:WP_209026156.1;Name=WP_209026156.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875238.1;locus_tag=JYJ20_RS08465;product=glutathione S-transferase family protein;protein_id=WP_209026156.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 97545 98990 . + . ID=gene-JYJ20_RS08470;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=JYJ20_RS08470 NZ_JAFIRP010000023.1 Protein Homology CDS 97545 98990 . + 0 ID=cds-WP_006248216.1;Parent=gene-JYJ20_RS08470;Dbxref=GenBank:WP_006248216.1;Name=WP_006248216.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618007.1;locus_tag=JYJ20_RS08470;product=metalloprotease TldD;protein_id=WP_006248216.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 99054 99935 . + . ID=gene-JYJ20_RS08475;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=JYJ20_RS08475 NZ_JAFIRP010000023.1 Protein Homology CDS 99054 99935 . + 0 ID=cds-WP_006251160.1;Parent=gene-JYJ20_RS08475;Dbxref=GenBank:WP_006251160.1;Name=WP_006251160.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248217.1;locus_tag=JYJ20_RS08475;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_006251160.1;transl_table=11 NZ_JAFIRP010000023.1 RefSeq gene 100110 100185 . - . ID=gene-JYJ20_RS08480;Name=JYJ20_RS08480;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS08480 NZ_JAFIRP010000023.1 tRNAscan-SE tRNA 100110 100185 . - . ID=rna-JYJ20_RS08480;Parent=gene-JYJ20_RS08480;anticodon=(pos:complement(100150..100152));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS08480;product=tRNA-Trp NZ_JAFIRP010000023.1 tRNAscan-SE exon 100110 100185 . - . ID=exon-JYJ20_RS08480-1;Parent=rna-JYJ20_RS08480;anticodon=(pos:complement(100150..100152));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS08480;product=tRNA-Trp NZ_JAFIRP010000023.1 RefSeq gene 100251 100327 . - . ID=gene-JYJ20_RS08485;Name=JYJ20_RS08485;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS08485 NZ_JAFIRP010000023.1 tRNAscan-SE tRNA 100251 100327 . - . ID=rna-JYJ20_RS08485;Parent=gene-JYJ20_RS08485;anticodon=(pos:complement(100291..100293));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS08485;product=tRNA-Asp NZ_JAFIRP010000023.1 tRNAscan-SE exon 100251 100327 . - . ID=exon-JYJ20_RS08485-1;Parent=rna-JYJ20_RS08485;anticodon=(pos:complement(100291..100293));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS08485;product=tRNA-Asp ##sequence-region NZ_JAFIRP010000024.1 1 51414 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000024.1 RefSeq region 1 51414 . + . ID=NZ_JAFIRP010000024.1:1..51414;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000024.1 RefSeq gene 295 642 . - . ID=gene-JYJ20_RS08490;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=JYJ20_RS08490 NZ_JAFIRP010000024.1 Protein Homology CDS 295 642 . - 0 ID=cds-WP_006249863.1;Parent=gene-JYJ20_RS08490;Dbxref=GenBank:WP_006249863.1;Name=WP_006249863.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249863.1;locus_tag=JYJ20_RS08490;product=fumarate reductase subunit FrdD;protein_id=WP_006249863.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 656 1048 . - . ID=gene-JYJ20_RS08495;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=JYJ20_RS08495 NZ_JAFIRP010000024.1 Protein Homology CDS 656 1048 . - 0 ID=cds-WP_006249862.1;Parent=gene-JYJ20_RS08495;Dbxref=GenBank:WP_006249862.1;Name=WP_006249862.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249862.1;locus_tag=JYJ20_RS08495;product=fumarate reductase subunit FrdC;protein_id=WP_006249862.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 1058 1789 . - . ID=gene-JYJ20_RS08500;Name=JYJ20_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08500 NZ_JAFIRP010000024.1 Protein Homology CDS 1058 1789 . - 0 ID=cds-WP_006251158.1;Parent=gene-JYJ20_RS08500;Dbxref=GenBank:WP_006251158.1;Name=WP_006251158.1;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251158.1;locus_tag=JYJ20_RS08500;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=WP_006251158.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 1812 3614 . - . ID=gene-JYJ20_RS08505;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=JYJ20_RS08505 NZ_JAFIRP010000024.1 Protein Homology CDS 1812 3614 . - 0 ID=cds-WP_006249860.1;Parent=gene-JYJ20_RS08505;Dbxref=GenBank:WP_006249860.1;Name=WP_006249860.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944100.1;locus_tag=JYJ20_RS08505;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_006249860.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 3947 4927 . + . ID=gene-JYJ20_RS08510;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=JYJ20_RS08510 NZ_JAFIRP010000024.1 Protein Homology CDS 3947 4927 . + 0 ID=cds-WP_020830969.1;Parent=gene-JYJ20_RS08510;Dbxref=GenBank:WP_020830969.1;Name=WP_020830969.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605446.1;locus_tag=JYJ20_RS08510;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_020830969.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 5009 5899 . + . ID=gene-JYJ20_RS08515;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=JYJ20_RS08515 NZ_JAFIRP010000024.1 Protein Homology CDS 5009 5899 . + 0 ID=cds-WP_006253360.1;Parent=gene-JYJ20_RS08515;Dbxref=GenBank:WP_006253360.1;Name=WP_006253360.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251155.1;locus_tag=JYJ20_RS08515;product=EamA family transporter RarD;protein_id=WP_006253360.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 5910 6521 . - . ID=gene-JYJ20_RS12410;Name=JYJ20_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12410 NZ_JAFIRP010000024.1 Protein Homology CDS 5910 6521 . - 0 ID=cds-WP_015484010.1;Parent=gene-JYJ20_RS12410;Dbxref=GenBank:WP_015484010.1;Name=WP_015484010.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=JYJ20_RS12410;product=MFS transporter;protein_id=WP_015484010.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 6549 6836 . - . ID=gene-JYJ20_RS12200;Name=JYJ20_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12200 NZ_JAFIRP010000024.1 Protein Homology CDS 6549 6836 . - 0 ID=cds-WP_015484009.1;Parent=gene-JYJ20_RS12200;Dbxref=GenBank:WP_015484009.1;Name=WP_015484009.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=JYJ20_RS12200;product=MFS transporter;protein_id=WP_015484009.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 6830 7084 . - . ID=gene-JYJ20_RS12205;Name=JYJ20_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12205 NZ_JAFIRP010000024.1 GeneMarkS-2+ CDS 6830 7084 . - 0 ID=cds-WP_015484008.1;Parent=gene-JYJ20_RS12205;Dbxref=GenBank:WP_015484008.1;Name=WP_015484008.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS12205;product=hypothetical protein;protein_id=WP_015484008.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 7276 9285 . + . ID=gene-JYJ20_RS08530;Name=JYJ20_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08530 NZ_JAFIRP010000024.1 Protein Homology CDS 7276 9285 . + 0 ID=cds-WP_006249806.1;Parent=gene-JYJ20_RS08530;Dbxref=GenBank:WP_006249806.1;Name=WP_006249806.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253168.1;locus_tag=JYJ20_RS08530;product=BCCT family transporter;protein_id=WP_006249806.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 9350 9817 . - . ID=gene-JYJ20_RS08535;Name=JYJ20_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08535 NZ_JAFIRP010000024.1 Protein Homology CDS 9350 9817 . - 0 ID=cds-WP_006249805.1;Parent=gene-JYJ20_RS08535;Dbxref=GenBank:WP_006249805.1;Name=WP_006249805.1;Ontology_term=GO:0032259,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249805.1;locus_tag=JYJ20_RS08535;product=methyltransferase family protein;protein_id=WP_006249805.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 9819 11393 . - . ID=gene-JYJ20_RS08540;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=JYJ20_RS08540 NZ_JAFIRP010000024.1 Protein Homology CDS 9819 11393 . - 0 ID=cds-WP_209026160.1;Parent=gene-JYJ20_RS08540;Dbxref=GenBank:WP_209026160.1;Name=WP_209026160.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251150.1;locus_tag=JYJ20_RS08540;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_209026160.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 11657 11920 . + . ID=gene-JYJ20_RS08545;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=JYJ20_RS08545 NZ_JAFIRP010000024.1 Protein Homology CDS 11657 11920 . + 0 ID=cds-WP_006253359.1;Parent=gene-JYJ20_RS08545;Dbxref=GenBank:WP_006253359.1;Name=WP_006253359.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652704.1;locus_tag=JYJ20_RS08545;product=30S ribosomal protein S20;protein_id=WP_006253359.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 12033 12428 . - . ID=gene-JYJ20_RS08550;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=JYJ20_RS08550 NZ_JAFIRP010000024.1 Protein Homology CDS 12033 12428 . - 0 ID=cds-WP_006251148.1;Parent=gene-JYJ20_RS08550;Dbxref=GenBank:WP_006251148.1;Name=WP_006251148.1;Ontology_term=GO:0034220,GO:0008381;gbkey=CDS;gene=mscL;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674322.1;locus_tag=JYJ20_RS08550;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_006251148.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 12560 13087 . - . ID=gene-JYJ20_RS08555;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=JYJ20_RS08555 NZ_JAFIRP010000024.1 Protein Homology CDS 12560 13087 . - 0 ID=cds-WP_006248218.1;Parent=gene-JYJ20_RS08555;Dbxref=GenBank:WP_006248218.1;Name=WP_006248218.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248218.1;locus_tag=JYJ20_RS08555;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_006248218.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 13088 14572 . - . ID=gene-JYJ20_RS08560;Name=JYJ20_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08560 NZ_JAFIRP010000024.1 Protein Homology CDS 13088 14572 . - 0 ID=cds-WP_006248219.1;Parent=gene-JYJ20_RS08560;Dbxref=GenBank:WP_006248219.1;Name=WP_006248219.1;Ontology_term=GO:0015379,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=potassium:chloride symporter activity|0015379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674320.1;locus_tag=JYJ20_RS08560;product=TrkH family potassium uptake protein;protein_id=WP_006248219.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 14576 15187 . - . ID=gene-JYJ20_RS08565;Name=JYJ20_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08565 NZ_JAFIRP010000024.1 Protein Homology CDS 14576 15187 . - 0 ID=cds-WP_209026161.1;Parent=gene-JYJ20_RS08565;Dbxref=GenBank:WP_209026161.1;Name=WP_209026161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248220.1;locus_tag=JYJ20_RS08565;product=YigZ family protein;protein_id=WP_209026161.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 15302 16255 . + . ID=gene-JYJ20_RS08570;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=JYJ20_RS08570 NZ_JAFIRP010000024.1 Protein Homology CDS 15302 16255 . + 0 ID=cds-WP_209026162.1;Parent=gene-JYJ20_RS08570;Dbxref=GenBank:WP_209026162.1;Name=WP_209026162.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251146.1;locus_tag=JYJ20_RS08570;product=methionyl-tRNA formyltransferase;protein_id=WP_209026162.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 16268 17746 . + . ID=gene-JYJ20_RS08575;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=JYJ20_RS08575 NZ_JAFIRP010000024.1 Protein Homology CDS 16268 17746 . + 0 ID=cds-WP_209026163.1;Parent=gene-JYJ20_RS08575;Dbxref=GenBank:WP_209026163.1;Name=WP_209026163.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251145.1;locus_tag=JYJ20_RS08575;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_209026163.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 17747 18337 . + . ID=gene-JYJ20_RS08580;Name=JYJ20_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08580 NZ_JAFIRP010000024.1 Protein Homology CDS 17747 18337 . + 0 ID=cds-WP_209026164.1;Parent=gene-JYJ20_RS08580;Dbxref=GenBank:WP_209026164.1;Name=WP_209026164.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248222.1;locus_tag=JYJ20_RS08580;product=acyl carrier protein phosphodiesterase;protein_id=WP_209026164.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 18426 19466 . + . ID=gene-JYJ20_RS08585;Name=JYJ20_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08585 NZ_JAFIRP010000024.1 Protein Homology CDS 18426 19466 . + 0 ID=cds-WP_040080505.1;Parent=gene-JYJ20_RS08585;Dbxref=GenBank:WP_040080505.1;Name=WP_040080505.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253356.1;locus_tag=JYJ20_RS08585;product=FecCD family ABC transporter permease;protein_id=WP_040080505.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 19476 20270 . + . ID=gene-JYJ20_RS08590;Name=JYJ20_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08590 NZ_JAFIRP010000024.1 Protein Homology CDS 19476 20270 . + 0 ID=cds-WP_052437177.1;Parent=gene-JYJ20_RS08590;Dbxref=GenBank:WP_052437177.1;Name=WP_052437177.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618262.1;locus_tag=JYJ20_RS08590;product=ABC transporter ATP-binding protein;protein_id=WP_052437177.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 20332 21438 . - . ID=gene-JYJ20_RS08595;Name=JYJ20_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08595 NZ_JAFIRP010000024.1 Protein Homology CDS 20332 21438 . - 0 ID=cds-WP_006251140.1;Parent=gene-JYJ20_RS08595;Dbxref=GenBank:WP_006251140.1;Name=WP_006251140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620192.1;locus_tag=JYJ20_RS08595;product=ABC transporter substrate-binding protein;protein_id=WP_006251140.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 21625 22632 . - . ID=gene-JYJ20_RS08600;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=JYJ20_RS08600 NZ_JAFIRP010000024.1 Protein Homology CDS 21625 22632 . - 0 ID=cds-WP_006248226.1;Parent=gene-JYJ20_RS08600;Dbxref=GenBank:WP_006248226.1;Name=WP_006248226.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248226.1;locus_tag=JYJ20_RS08600;product=lipoyl synthase;protein_id=WP_006248226.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 22647 23300 . - . ID=gene-JYJ20_RS08605;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=JYJ20_RS08605 NZ_JAFIRP010000024.1 Protein Homology CDS 22647 23300 . - 0 ID=cds-WP_020830971.1;Parent=gene-JYJ20_RS08605;Dbxref=GenBank:WP_020830971.1;Name=WP_020830971.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251139.1;locus_tag=JYJ20_RS08605;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_020830971.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 23362 23661 . - . ID=gene-JYJ20_RS08610;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=JYJ20_RS08610 NZ_JAFIRP010000024.1 Protein Homology CDS 23362 23661 . - 0 ID=cds-WP_006248228.1;Parent=gene-JYJ20_RS08610;Dbxref=GenBank:WP_006248228.1;Name=WP_006248228.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248228.1;locus_tag=JYJ20_RS08610;product=DUF493 family protein YbeD;protein_id=WP_006248228.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 23829 25007 . - . ID=gene-JYJ20_RS08615;Name=JYJ20_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08615 NZ_JAFIRP010000024.1 Protein Homology CDS 23829 25007 . - 0 ID=cds-WP_006248229.1;Parent=gene-JYJ20_RS08615;Dbxref=GenBank:WP_006248229.1;Name=WP_006248229.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602317.1;locus_tag=JYJ20_RS08615;product=serine hydrolase;protein_id=WP_006248229.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 25021 25680 . - . ID=gene-JYJ20_RS08620;Name=JYJ20_RS08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08620 NZ_JAFIRP010000024.1 Protein Homology CDS 25021 25680 . - 0 ID=cds-WP_006248230.1;Parent=gene-JYJ20_RS08620;Dbxref=GenBank:WP_006248230.1;Name=WP_006248230.1;Ontology_term=GO:0071555,GO:0008932;gbkey=CDS;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248230.1;locus_tag=JYJ20_RS08620;product=septal ring lytic transglycosylase RlpA family protein;protein_id=WP_006248230.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 25772 26899 . - . ID=gene-JYJ20_RS08625;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=JYJ20_RS08625 NZ_JAFIRP010000024.1 Protein Homology CDS 25772 26899 . - 0 ID=cds-WP_006248231.1;Parent=gene-JYJ20_RS08625;Dbxref=GenBank:WP_006248231.1;Name=WP_006248231.1;Ontology_term=GO:0008360,GO:0016020;gbkey=CDS;gene=rodA;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248231.1;locus_tag=JYJ20_RS08625;product=rod shape-determining protein RodA;protein_id=WP_006248231.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 26892 28841 . - . ID=gene-JYJ20_RS08630;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=JYJ20_RS08630 NZ_JAFIRP010000024.1 Protein Homology CDS 26892 28841 . - 0 ID=cds-WP_006248232.1;Parent=gene-JYJ20_RS08630;Dbxref=GenBank:WP_006248232.1;Name=WP_006248232.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253164.1;locus_tag=JYJ20_RS08630;product=penicillin-binding protein 2;protein_id=WP_006248232.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 28865 29332 . - . ID=gene-JYJ20_RS08635;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=JYJ20_RS08635 NZ_JAFIRP010000024.1 Protein Homology CDS 28865 29332 . - 0 ID=cds-WP_006248233.1;Parent=gene-JYJ20_RS08635;Dbxref=GenBank:WP_006248233.1;Name=WP_006248233.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018355406.1;locus_tag=JYJ20_RS08635;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_006248233.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 29409 29723 . - . ID=gene-JYJ20_RS08640;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=JYJ20_RS08640 NZ_JAFIRP010000024.1 Protein Homology CDS 29409 29723 . - 0 ID=cds-WP_006253161.1;Parent=gene-JYJ20_RS08640;Dbxref=GenBank:WP_006253161.1;Name=WP_006253161.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674146.1;locus_tag=JYJ20_RS08640;product=ribosome silencing factor;protein_id=WP_006253161.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq pseudogene 29891 30686 . - . ID=gene-JYJ20_RS12415;Name=JYJ20_RS12415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS12415;pseudo=true NZ_JAFIRP010000024.1 Protein Homology CDS 29891 30686 . - 0 ID=cds-JYJ20_RS12415;Parent=gene-JYJ20_RS12415;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248235.1;locus_tag=JYJ20_RS12415;product=DMT family transporter;pseudo=true;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 30737 31921 . - . ID=gene-JYJ20_RS08650;Name=uxuA;gbkey=Gene;gene=uxuA;gene_biotype=protein_coding;locus_tag=JYJ20_RS08650 NZ_JAFIRP010000024.1 Protein Homology CDS 30737 31921 . - 0 ID=cds-WP_006248236.1;Parent=gene-JYJ20_RS08650;Dbxref=GenBank:WP_006248236.1;Name=WP_006248236.1;Ontology_term=GO:0006064,GO:0008927;gbkey=CDS;gene=uxuA;go_function=mannonate dehydratase activity|0008927||IEA;go_process=glucuronate catabolic process|0006064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012341261.1;locus_tag=JYJ20_RS08650;product=mannonate dehydratase;protein_id=WP_006248236.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 31951 32712 . - . ID=gene-JYJ20_RS08655;Name=JYJ20_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08655 NZ_JAFIRP010000024.1 Protein Homology CDS 31951 32712 . - 0 ID=cds-WP_006248237.1;Parent=gene-JYJ20_RS08655;Dbxref=GenBank:WP_006248237.1;Name=WP_006248237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248237.1;locus_tag=JYJ20_RS08655;product=FCD domain-containing protein;protein_id=WP_006248237.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 32876 33901 . + . ID=gene-JYJ20_RS08660;Name=JYJ20_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08660 NZ_JAFIRP010000024.1 Protein Homology CDS 32876 33901 . + 0 ID=cds-WP_006248239.1;Parent=gene-JYJ20_RS08660;Dbxref=GenBank:WP_006248239.1;Name=WP_006248239.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248239.1;locus_tag=JYJ20_RS08660;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_006248239.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 33930 34913 . + . ID=gene-JYJ20_RS08665;Name=JYJ20_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08665 NZ_JAFIRP010000024.1 Protein Homology CDS 33930 34913 . + 0 ID=cds-WP_006248240.1;Parent=gene-JYJ20_RS08665;Dbxref=GenBank:WP_006248240.1;Name=WP_006248240.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248240.1;locus_tag=JYJ20_RS08665;product=TRAP transporter substrate-binding protein;protein_id=WP_006248240.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 34974 35453 . + . ID=gene-JYJ20_RS08670;Name=JYJ20_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08670 NZ_JAFIRP010000024.1 Protein Homology CDS 34974 35453 . + 0 ID=cds-WP_006248241.1;Parent=gene-JYJ20_RS08670;Dbxref=GenBank:WP_006248241.1;Name=WP_006248241.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248241.1;locus_tag=JYJ20_RS08670;product=TRAP transporter small permease;protein_id=WP_006248241.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 35456 36727 . + . ID=gene-JYJ20_RS08675;Name=JYJ20_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08675 NZ_JAFIRP010000024.1 Protein Homology CDS 35456 36727 . + 0 ID=cds-WP_006248242.1;Parent=gene-JYJ20_RS08675;Dbxref=GenBank:WP_006248242.1;Name=WP_006248242.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005668000.1;locus_tag=JYJ20_RS08675;product=TRAP transporter large permease;protein_id=WP_006248242.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 36739 37584 . + . ID=gene-JYJ20_RS08680;Name=JYJ20_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08680 NZ_JAFIRP010000024.1 Protein Homology CDS 36739 37584 . + 0 ID=cds-WP_006248243.1;Parent=gene-JYJ20_RS08680;Dbxref=GenBank:WP_006248243.1;Name=WP_006248243.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248243.1;locus_tag=JYJ20_RS08680;product=SDR family oxidoreductase;protein_id=WP_006248243.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 37601 38548 . + . ID=gene-JYJ20_RS08685;Name=JYJ20_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08685 NZ_JAFIRP010000024.1 Protein Homology CDS 37601 38548 . + 0 ID=cds-WP_006248244.1;Parent=gene-JYJ20_RS08685;Dbxref=GenBank:WP_006248244.1;Name=WP_006248244.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248244.1;locus_tag=JYJ20_RS08685;product=sugar kinase;protein_id=WP_006248244.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 38636 39274 . + . ID=gene-JYJ20_RS08690;Name=JYJ20_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08690 NZ_JAFIRP010000024.1 Protein Homology CDS 38636 39274 . + 0 ID=cds-WP_006248245.1;Parent=gene-JYJ20_RS08690;Dbxref=GenBank:WP_006248245.1;Name=WP_006248245.1;Ontology_term=GO:0016829,GO:0016830,GO:0016832,GO:0016833;gbkey=CDS;go_function=lyase activity|0016829||IEA,carbon-carbon lyase activity|0016830||IEA,aldehyde-lyase activity|0016832||IEA,oxo-acid-lyase activity|0016833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251124.1;locus_tag=JYJ20_RS08690;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_006248245.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 39498 40952 . + . ID=gene-JYJ20_RS08695;Name=JYJ20_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08695 NZ_JAFIRP010000024.1 Protein Homology CDS 39498 40952 . + 0 ID=cds-WP_040080500.1;Parent=gene-JYJ20_RS08695;Dbxref=GenBank:WP_040080500.1;Name=WP_040080500.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248246.1;locus_tag=JYJ20_RS08695;product=surface lipoprotein assembly modifier;protein_id=WP_040080500.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 41000 43597 . - . ID=gene-JYJ20_RS08700;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=JYJ20_RS08700 NZ_JAFIRP010000024.1 Protein Homology CDS 41000 43597 . - 0 ID=cds-WP_209026165.1;Parent=gene-JYJ20_RS08700;Dbxref=GenBank:WP_209026165.1;Name=WP_209026165.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248247.1;locus_tag=JYJ20_RS08700;product=DNA mismatch repair protein MutS;protein_id=WP_209026165.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 43747 44310 . + . ID=gene-JYJ20_RS08705;Name=JYJ20_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08705 NZ_JAFIRP010000024.1 Protein Homology CDS 43747 44310 . + 0 ID=cds-WP_006248248.1;Parent=gene-JYJ20_RS08705;Dbxref=GenBank:WP_006248248.1;Name=WP_006248248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613140.1;locus_tag=JYJ20_RS08705;product=DUF5358 domain-containing protein;protein_id=WP_006248248.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 44484 45113 . + . ID=gene-JYJ20_RS08710;Name=JYJ20_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08710 NZ_JAFIRP010000024.1 Protein Homology CDS 44484 45113 . + 0 ID=cds-WP_080651061.1;Parent=gene-JYJ20_RS08710;Dbxref=GenBank:WP_080651061.1;Name=WP_080651061.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248249.1;locus_tag=JYJ20_RS08710;product=ComEA family DNA-binding protein;protein_id=WP_080651061.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 45261 45890 . + . ID=gene-JYJ20_RS08715;Name=bamJ;gbkey=Gene;gene=bamJ;gene_biotype=protein_coding;locus_tag=JYJ20_RS08715 NZ_JAFIRP010000024.1 Protein Homology CDS 45261 45890 . + 0 ID=cds-WP_006251119.1;Parent=gene-JYJ20_RS08715;Dbxref=GenBank:WP_006251119.1;Name=WP_006251119.1;gbkey=CDS;gene=bamJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007526112.1;locus_tag=JYJ20_RS08715;product=BamJ family beta-barrel-assembly machinery protein;protein_id=WP_006251119.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 45956 46471 . + . ID=gene-JYJ20_RS08720;Name=JYJ20_RS08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08720 NZ_JAFIRP010000024.1 Protein Homology CDS 45956 46471 . + 0 ID=cds-WP_006248251.1;Parent=gene-JYJ20_RS08720;Dbxref=GenBank:WP_006248251.1;Name=WP_006248251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248251.1;locus_tag=JYJ20_RS08720;product=protein disulfide oxidoreductase;protein_id=WP_006248251.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq pseudogene 46519 47573 . - . ID=gene-JYJ20_RS08725;Name=JYJ20_RS08725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS08725;pseudo=true NZ_JAFIRP010000024.1 Protein Homology CDS 46519 47573 . - 0 ID=cds-JYJ20_RS08725;Parent=gene-JYJ20_RS08725;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009500034.1;locus_tag=JYJ20_RS08725;product=MFS transporter;pseudo=true;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 47770 49128 . + . ID=gene-JYJ20_RS08730;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=JYJ20_RS08730 NZ_JAFIRP010000024.1 Protein Homology CDS 47770 49128 . + 0 ID=cds-WP_006248255.1;Parent=gene-JYJ20_RS08730;Dbxref=GenBank:WP_006248255.1;Name=WP_006248255.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007523948.1;locus_tag=JYJ20_RS08730;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_006248255.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 49129 50394 . + . ID=gene-JYJ20_RS08735;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=JYJ20_RS08735 NZ_JAFIRP010000024.1 Protein Homology CDS 49129 50394 . + 0 ID=cds-WP_021279417.1;Parent=gene-JYJ20_RS08735;Dbxref=GenBank:WP_021279417.1;Name=WP_021279417.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248256.1;locus_tag=JYJ20_RS08735;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_021279417.1;transl_table=11 NZ_JAFIRP010000024.1 RefSeq gene 50384 51277 . - . ID=gene-JYJ20_RS08740;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=JYJ20_RS08740 NZ_JAFIRP010000024.1 Protein Homology CDS 50384 51277 . - 0 ID=cds-WP_006248257.1;Parent=gene-JYJ20_RS08740;Dbxref=GenBank:WP_006248257.1;Name=WP_006248257.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605467.1;locus_tag=JYJ20_RS08740;product=site-specific tyrosine recombinase XerD;protein_id=WP_006248257.1;transl_table=11 ##sequence-region NZ_JAFIRP010000025.1 1 49643 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000025.1 RefSeq region 1 49643 . + . ID=NZ_JAFIRP010000025.1:1..49643;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000025.1 RefSeq gene 236 1369 . - . ID=gene-JYJ20_RS08745;Name=JYJ20_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08745 NZ_JAFIRP010000025.1 Protein Homology CDS 236 1369 . - 0 ID=cds-WP_006250152.1;Parent=gene-JYJ20_RS08745;Dbxref=GenBank:WP_006250152.1;Name=WP_006250152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478416.1;locus_tag=JYJ20_RS08745;product=methionine biosynthesis PLP-dependent protein;protein_id=WP_006250152.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 1386 2198 . - . ID=gene-JYJ20_RS08750;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=JYJ20_RS08750 NZ_JAFIRP010000025.1 Protein Homology CDS 1386 2198 . - 0 ID=cds-WP_006250151.1;Parent=gene-JYJ20_RS08750;Dbxref=GenBank:WP_006250151.1;Name=WP_006250151.1;Ontology_term=GO:0009085,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase activity|0008839||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005696006.1;locus_tag=JYJ20_RS08750;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_006250151.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 2249 2626 . - . ID=gene-JYJ20_RS08755;Name=JYJ20_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08755 NZ_JAFIRP010000025.1 Protein Homology CDS 2249 2626 . - 0 ID=cds-WP_006250150.1;Parent=gene-JYJ20_RS08755;Dbxref=GenBank:WP_006250150.1;Name=WP_006250150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250150.1;locus_tag=JYJ20_RS08755;product=hypothetical protein;protein_id=WP_006250150.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 2616 3086 . - . ID=gene-JYJ20_RS08760;Name=JYJ20_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08760 NZ_JAFIRP010000025.1 Protein Homology CDS 2616 3086 . - 0 ID=cds-WP_006250149.1;Parent=gene-JYJ20_RS08760;Dbxref=GenBank:WP_006250149.1;Name=WP_006250149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250149.1;locus_tag=JYJ20_RS08760;product=hypothetical protein;protein_id=WP_006250149.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 3157 4245 . - . ID=gene-JYJ20_RS08765;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=JYJ20_RS08765 NZ_JAFIRP010000025.1 Protein Homology CDS 3157 4245 . - 0 ID=cds-WP_006250148.1;Parent=gene-JYJ20_RS08765;Dbxref=GenBank:WP_006250148.1;Name=WP_006250148.1;Ontology_term=GO:0032259,GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250148.1;locus_tag=JYJ20_RS08765;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_006250148.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 4245 4637 . - . ID=gene-JYJ20_RS08770;Name=JYJ20_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08770 NZ_JAFIRP010000025.1 Protein Homology CDS 4245 4637 . - 0 ID=cds-WP_006250147.1;Parent=gene-JYJ20_RS08770;Dbxref=GenBank:WP_006250147.1;Name=WP_006250147.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250147.1;locus_tag=JYJ20_RS08770;product=DUF423 domain-containing protein;protein_id=WP_006250147.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 4744 6255 . - . ID=gene-JYJ20_RS08775;Name=JYJ20_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08775 NZ_JAFIRP010000025.1 Protein Homology CDS 4744 6255 . - 0 ID=cds-WP_052437192.1;Parent=gene-JYJ20_RS08775;Dbxref=GenBank:WP_052437192.1;Name=WP_052437192.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252330.1;locus_tag=JYJ20_RS08775;product=SulP family inorganic anion transporter;protein_id=WP_052437192.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 6410 8767 . - . ID=gene-JYJ20_RS08780;Name=JYJ20_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08780 NZ_JAFIRP010000025.1 Protein Homology CDS 6410 8767 . - 0 ID=cds-WP_006250146.1;Parent=gene-JYJ20_RS08780;Dbxref=GenBank:WP_006250146.1;Name=WP_006250146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250146.1;locus_tag=JYJ20_RS08780;product=molybdopterin guanine dinucleotide-containing S/N-oxide reductase;protein_id=WP_006250146.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 8903 11509 . - . ID=gene-JYJ20_RS08785;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=JYJ20_RS08785 NZ_JAFIRP010000025.1 Protein Homology CDS 8903 11509 . - 0 ID=cds-WP_006253432.1;Parent=gene-JYJ20_RS08785;Dbxref=GenBank:WP_006253432.1;Name=WP_006253432.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250144.1;locus_tag=JYJ20_RS08785;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_006253432.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 11529 12776 . - . ID=gene-JYJ20_RS08790;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=JYJ20_RS08790 NZ_JAFIRP010000025.1 Protein Homology CDS 11529 12776 . - 0 ID=cds-WP_006253433.1;Parent=gene-JYJ20_RS08790;Dbxref=GenBank:WP_006253433.1;Name=WP_006253433.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010907250.1;locus_tag=JYJ20_RS08790;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_006253433.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 13010 14290 . + . ID=gene-JYJ20_RS08795;Name=JYJ20_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08795 NZ_JAFIRP010000025.1 Protein Homology CDS 13010 14290 . + 0 ID=cds-WP_134916685.1;Parent=gene-JYJ20_RS08795;Dbxref=GenBank:WP_134916685.1;Name=WP_134916685.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248616.1;locus_tag=JYJ20_RS08795;product=citrate synthase;protein_id=WP_134916685.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 14363 16996 . - . ID=gene-JYJ20_RS12220;Name=JYJ20_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12220 NZ_JAFIRP010000025.1 Protein Homology CDS 14363 16996 . - 0 ID=cds-WP_226318022.1;Parent=gene-JYJ20_RS12220;Dbxref=GenBank:WP_226318022.1;Name=WP_226318022.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF016724.7;locus_tag=JYJ20_RS12220;product=DEAD/DEAH box helicase;protein_id=WP_226318022.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 17012 17719 . - . ID=gene-JYJ20_RS12475;Name=JYJ20_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12475 NZ_JAFIRP010000025.1 Protein Homology CDS 17012 17719 . - 0 ID=cds-WP_425331224.1;Parent=gene-JYJ20_RS12475;Dbxref=GenBank:WP_425331224.1;Name=WP_425331224.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: protein motif:HMM:NF013704.7;locus_tag=JYJ20_RS12475;product=DNA methyltransferase;protein_id=WP_425331224.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 17683 18435 . - . ID=gene-JYJ20_RS08820;Name=JYJ20_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08820 NZ_JAFIRP010000025.1 Protein Homology CDS 17683 18435 . - 0 ID=cds-WP_425331225.1;Parent=gene-JYJ20_RS08820;Dbxref=GenBank:WP_425331225.1;Name=WP_425331225.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: protein motif:HMM:NF013704.7;locus_tag=JYJ20_RS08820;product=DNA methyltransferase;protein_id=WP_425331225.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 18474 18656 . - . ID=gene-JYJ20_RS08825;Name=JYJ20_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08825 NZ_JAFIRP010000025.1 Protein Homology CDS 18474 18656 . - 0 ID=cds-WP_021280617.1;Parent=gene-JYJ20_RS08825;Dbxref=GenBank:WP_021280617.1;Name=WP_021280617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252355.1;locus_tag=JYJ20_RS08825;product=hypothetical protein;protein_id=WP_021280617.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 18797 21283 . - . ID=gene-JYJ20_RS08830;Name=torA;gbkey=Gene;gene=torA;gene_biotype=protein_coding;locus_tag=JYJ20_RS08830 NZ_JAFIRP010000025.1 Protein Homology CDS 18797 21283 . - 0 ID=cds-WP_209026166.1;Parent=gene-JYJ20_RS08830;Dbxref=GenBank:WP_209026166.1;Name=WP_209026166.1;Ontology_term=GO:0030151,GO:0043546,GO:0050626,GO:0042597;gbkey=CDS;gene=torA;go_component=periplasmic space|0042597||IEA;go_function=molybdenum ion binding|0030151||IEA,molybdopterin cofactor binding|0043546||IEA,trimethylamine-N-oxide reductase (cytochrome c) activity|0050626||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248615.1;locus_tag=JYJ20_RS08830;product=trimethylamine-N-oxide reductase TorA;protein_id=WP_209026166.1;transl_table=11 NZ_JAFIRP010000025.1 cmsearch riboswitch 21302 21497 . - . ID=id-NZ_JAFIRP010000025.1:21302..21497;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAFIRP010000025.1 RefSeq gene 21501 22616 . - . ID=gene-JYJ20_RS08835;Name=JYJ20_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08835 NZ_JAFIRP010000025.1 Protein Homology CDS 21501 22616 . - 0 ID=cds-WP_006248614.1;Parent=gene-JYJ20_RS08835;Dbxref=GenBank:WP_006248614.1;Name=WP_006248614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248614.1;locus_tag=JYJ20_RS08835;product=NapC/NirT family cytochrome c;protein_id=WP_006248614.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 22758 24509 . - . ID=gene-JYJ20_RS08840;Name=JYJ20_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08840 NZ_JAFIRP010000025.1 Protein Homology CDS 22758 24509 . - 0 ID=cds-WP_209026167.1;Parent=gene-JYJ20_RS08840;Dbxref=GenBank:WP_209026167.1;Name=WP_209026167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248613.1;locus_tag=JYJ20_RS08840;product=ABC transporter substrate-binding protein;protein_id=WP_209026167.1;transl_table=11 NZ_JAFIRP010000025.1 cmsearch riboswitch 24673 24829 . + . ID=id-NZ_JAFIRP010000025.1:24673..24829;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAFIRP010000025.1 RefSeq gene 24818 25843 . + . ID=gene-JYJ20_RS08845;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=JYJ20_RS08845 NZ_JAFIRP010000025.1 Protein Homology CDS 24818 25843 . + 0 ID=cds-WP_209026168.1;Parent=gene-JYJ20_RS08845;Dbxref=GenBank:WP_209026168.1;Name=WP_209026168.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607581.1;locus_tag=JYJ20_RS08845;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_209026168.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 26344 26820 . + . ID=gene-JYJ20_RS08850;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=JYJ20_RS08850 NZ_JAFIRP010000025.1 Protein Homology CDS 26344 26820 . + 0 ID=cds-WP_209026169.1;Parent=gene-JYJ20_RS08850;Dbxref=GenBank:WP_209026169.1;Name=WP_209026169.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597027.1;locus_tag=JYJ20_RS08850;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_209026169.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 26813 27058 . + . ID=gene-JYJ20_RS08855;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=JYJ20_RS08855 NZ_JAFIRP010000025.1 Protein Homology CDS 26813 27058 . + 0 ID=cds-WP_006248610.1;Parent=gene-JYJ20_RS08855;Dbxref=GenBank:WP_006248610.1;Name=WP_006248610.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005631889.1;locus_tag=JYJ20_RS08855;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_006248610.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 27060 27515 . + . ID=gene-JYJ20_RS08860;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=JYJ20_RS08860 NZ_JAFIRP010000025.1 Protein Homology CDS 27060 27515 . + 0 ID=cds-WP_006248609.1;Parent=gene-JYJ20_RS08860;Dbxref=GenBank:WP_006248609.1;Name=WP_006248609.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597033.1;locus_tag=JYJ20_RS08860;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_006248609.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 27548 28030 . + . ID=gene-JYJ20_RS08865;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=JYJ20_RS08865 NZ_JAFIRP010000025.1 Protein Homology CDS 27548 28030 . + 0 ID=cds-WP_006248608.1;Parent=gene-JYJ20_RS08865;Dbxref=GenBank:WP_006248608.1;Name=WP_006248608.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248608.1;locus_tag=JYJ20_RS08865;product=rRNA maturation RNase YbeY;protein_id=WP_006248608.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 28108 30126 . + . ID=gene-JYJ20_RS08870;Name=JYJ20_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08870 NZ_JAFIRP010000025.1 Protein Homology CDS 28108 30126 . + 0 ID=cds-WP_006253437.1;Parent=gene-JYJ20_RS08870;Dbxref=GenBank:WP_006253437.1;Name=WP_006253437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253437.1;locus_tag=JYJ20_RS08870;product=tRNA(Met) cytidine acetyltransferase TmcA;protein_id=WP_006253437.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 30185 31381 . + . ID=gene-JYJ20_RS08875;Name=JYJ20_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08875 NZ_JAFIRP010000025.1 Protein Homology CDS 30185 31381 . + 0 ID=cds-WP_280633519.1;Parent=gene-JYJ20_RS08875;Dbxref=GenBank:WP_280633519.1;Name=WP_280633519.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651906.1;locus_tag=JYJ20_RS08875;product=amino acid aminotransferase;protein_id=WP_280633519.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 31488 32789 . - . ID=gene-JYJ20_RS08880;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=JYJ20_RS08880 NZ_JAFIRP010000025.1 Protein Homology CDS 31488 32789 . - 0 ID=cds-WP_040080827.1;Parent=gene-JYJ20_RS08880;Dbxref=GenBank:WP_040080827.1;Name=WP_040080827.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248580.1;locus_tag=JYJ20_RS08880;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_040080827.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 32799 33695 . - . ID=gene-JYJ20_RS08885;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=JYJ20_RS08885 NZ_JAFIRP010000025.1 Protein Homology CDS 32799 33695 . - 0 ID=cds-WP_209026170.1;Parent=gene-JYJ20_RS08885;Dbxref=GenBank:WP_209026170.1;Name=WP_209026170.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248581.1;locus_tag=JYJ20_RS08885;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_209026170.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq pseudogene 34004 34786 . + . ID=gene-JYJ20_RS08890;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=pseudogene;locus_tag=JYJ20_RS08890;pseudo=true NZ_JAFIRP010000025.1 Protein Homology CDS 34004 34786 . + 0 ID=cds-JYJ20_RS08890;Parent=gene-JYJ20_RS08890;Note=frameshifted;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252367.1;locus_tag=JYJ20_RS08890;product=nucleoside triphosphate pyrophosphohydrolase;pseudo=true;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 34854 35570 . + . ID=gene-JYJ20_RS08895;Name=JYJ20_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08895 NZ_JAFIRP010000025.1 Protein Homology CDS 34854 35570 . + 0 ID=cds-WP_015484640.1;Parent=gene-JYJ20_RS08895;Dbxref=GenBank:WP_015484640.1;Name=WP_015484640.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484640.1;locus_tag=JYJ20_RS08895;product=response regulator;protein_id=WP_015484640.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 35631 37016 . + . ID=gene-JYJ20_RS08900;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=JYJ20_RS08900 NZ_JAFIRP010000025.1 Protein Homology CDS 35631 37016 . + 0 ID=cds-WP_209026171.1;Parent=gene-JYJ20_RS08900;Dbxref=GenBank:WP_209026171.1;Name=WP_209026171.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484216.1;locus_tag=JYJ20_RS08900;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_209026171.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 37066 38988 . + . ID=gene-JYJ20_RS08905;Name=JYJ20_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08905 NZ_JAFIRP010000025.1 Protein Homology CDS 37066 38988 . + 0 ID=cds-WP_209026172.1;Parent=gene-JYJ20_RS08905;Dbxref=GenBank:WP_209026172.1;Name=WP_209026172.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011200304.1;locus_tag=JYJ20_RS08905;product=MacB family efflux pump subunit;protein_id=WP_209026172.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 39072 39842 . + . ID=gene-JYJ20_RS08910;Name=JYJ20_RS08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08910 NZ_JAFIRP010000025.1 Protein Homology CDS 39072 39842 . + 0 ID=cds-WP_006248587.1;Parent=gene-JYJ20_RS08910;Dbxref=GenBank:WP_006248587.1;Name=WP_006248587.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604026.1;locus_tag=JYJ20_RS08910;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_006248587.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 39923 41053 . - . ID=gene-JYJ20_RS08915;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=JYJ20_RS08915 NZ_JAFIRP010000025.1 Protein Homology CDS 39923 41053 . - 0 ID=cds-WP_006248588.1;Parent=gene-JYJ20_RS08915;Dbxref=GenBank:WP_006248588.1;Name=WP_006248588.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007241315.1;locus_tag=JYJ20_RS08915;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_006248588.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 41080 43350 . - . ID=gene-JYJ20_RS08920;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=JYJ20_RS08920 NZ_JAFIRP010000025.1 Protein Homology CDS 41080 43350 . - 0 ID=cds-WP_209026173.1;Parent=gene-JYJ20_RS08920;Dbxref=GenBank:WP_209026173.1;Name=WP_209026173.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018356743.1;locus_tag=JYJ20_RS08920;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_209026173.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 43706 46078 . - . ID=gene-JYJ20_RS08925;Name=JYJ20_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08925 NZ_JAFIRP010000025.1 Protein Homology CDS 43706 46078 . - 0 ID=cds-WP_342365907.1;Parent=gene-JYJ20_RS08925;Dbxref=GenBank:WP_342365907.1;Name=WP_342365907.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478456.1;locus_tag=JYJ20_RS08925;product=TonB-dependent receptor;protein_id=WP_342365907.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 46239 47696 . + . ID=gene-JYJ20_RS08930;Name=JYJ20_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08930 NZ_JAFIRP010000025.1 Protein Homology CDS 46239 47696 . + 0 ID=cds-WP_209026174.1;Parent=gene-JYJ20_RS08930;Dbxref=GenBank:WP_209026174.1;Name=WP_209026174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248592.1;locus_tag=JYJ20_RS08930;product=hypothetical protein;protein_id=WP_209026174.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq gene 47760 49172 . + . ID=gene-JYJ20_RS08935;Name=JYJ20_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08935 NZ_JAFIRP010000025.1 Protein Homology CDS 47760 49172 . + 0 ID=cds-WP_209026175.1;Parent=gene-JYJ20_RS08935;Dbxref=GenBank:WP_209026175.1;Name=WP_209026175.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604600.1;locus_tag=JYJ20_RS08935;product=surface lipoprotein assembly modifier;protein_id=WP_209026175.1;transl_table=11 NZ_JAFIRP010000025.1 RefSeq pseudogene 49422 49643 . - . ID=gene-JYJ20_RS08940;Name=JYJ20_RS08940;end_range=49643,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS08940;partial=true;pseudo=true NZ_JAFIRP010000025.1 Protein Homology CDS 49422 49643 . - 0 ID=cds-JYJ20_RS08940;Parent=gene-JYJ20_RS08940;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=49643,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248594.1;locus_tag=JYJ20_RS08940;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAFIRP010000026.1 1 104821 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000026.1 RefSeq region 1 104821 . + . ID=NZ_JAFIRP010000026.1:1..104821;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000026.1 RefSeq gene 22 225 . - . ID=gene-JYJ20_RS08945;Name=JYJ20_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08945 NZ_JAFIRP010000026.1 Protein Homology CDS 22 225 . - 0 ID=cds-WP_006249206.1;Parent=gene-JYJ20_RS08945;Dbxref=GenBank:WP_006249206.1;Name=WP_006249206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249206.1;locus_tag=JYJ20_RS08945;product=cupin domain-containing protein;protein_id=WP_006249206.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 237 467 . - . ID=gene-JYJ20_RS08950;Name=JYJ20_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08950 NZ_JAFIRP010000026.1 Protein Homology CDS 237 467 . - 0 ID=cds-WP_159630606.1;Parent=gene-JYJ20_RS08950;Dbxref=GenBank:WP_159630606.1;Name=WP_159630606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249207.1;locus_tag=JYJ20_RS08950;product=hypothetical protein;protein_id=WP_159630606.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 1529 1657 . - . ID=gene-JYJ20_RS12355;Name=JYJ20_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12355 NZ_JAFIRP010000026.1 GeneMarkS-2+ CDS 1529 1657 . - 0 ID=cds-WP_006249211.1;Parent=gene-JYJ20_RS12355;Dbxref=GenBank:WP_006249211.1;Name=WP_006249211.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS12355;product=hypothetical protein;protein_id=WP_006249211.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 2481 3677 . + . ID=gene-JYJ20_RS08955;Name=JYJ20_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08955 NZ_JAFIRP010000026.1 Protein Homology CDS 2481 3677 . + 0 ID=cds-WP_006251854.1;Parent=gene-JYJ20_RS08955;Dbxref=GenBank:WP_006251854.1;Name=WP_006251854.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=obsolete cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251854.1;locus_tag=JYJ20_RS08955;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_006251854.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 3784 4758 . + . ID=gene-JYJ20_RS08960;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=JYJ20_RS08960 NZ_JAFIRP010000026.1 Protein Homology CDS 3784 4758 . + 0 ID=cds-WP_006251855.1;Parent=gene-JYJ20_RS08960;Dbxref=GenBank:WP_006251855.1;Name=WP_006251855.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007523004.1;locus_tag=JYJ20_RS08960;product=6-phosphofructokinase;protein_id=WP_006251855.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 4826 5533 . + . ID=gene-JYJ20_RS08965;Name=JYJ20_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS08965 NZ_JAFIRP010000026.1 Protein Homology CDS 4826 5533 . + 0 ID=cds-WP_006249214.1;Parent=gene-JYJ20_RS08965;Dbxref=GenBank:WP_006249214.1;Name=WP_006249214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253109.1;locus_tag=JYJ20_RS08965;product=YwiC-like family protein;protein_id=WP_006249214.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 5578 7029 . - . ID=gene-JYJ20_RS08970;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=JYJ20_RS08970 NZ_JAFIRP010000026.1 Protein Homology CDS 5578 7029 . - 0 ID=cds-WP_006249215.1;Parent=gene-JYJ20_RS08970;Dbxref=GenBank:WP_006249215.1;Name=WP_006249215.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251857.1;locus_tag=JYJ20_RS08970;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_006249215.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 7143 8003 . - . ID=gene-JYJ20_RS08975;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=JYJ20_RS08975 NZ_JAFIRP010000026.1 Protein Homology CDS 7143 8003 . - 0 ID=cds-WP_006249216.1;Parent=gene-JYJ20_RS08975;Dbxref=GenBank:WP_006249216.1;Name=WP_006249216.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249216.1;locus_tag=JYJ20_RS08975;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_006249216.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 8173 8249 . + . ID=gene-JYJ20_RS08980;Name=JYJ20_RS08980;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS08980 NZ_JAFIRP010000026.1 tRNAscan-SE tRNA 8173 8249 . + . ID=rna-JYJ20_RS08980;Parent=gene-JYJ20_RS08980;anticodon=(pos:8207..8209);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS08980;product=tRNA-Pro NZ_JAFIRP010000026.1 tRNAscan-SE exon 8173 8249 . + . ID=exon-JYJ20_RS08980-1;Parent=rna-JYJ20_RS08980;anticodon=(pos:8207..8209);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS08980;product=tRNA-Pro NZ_JAFIRP010000026.1 RefSeq gene 8274 8350 . + . ID=gene-JYJ20_RS08985;Name=JYJ20_RS08985;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS08985 NZ_JAFIRP010000026.1 tRNAscan-SE tRNA 8274 8350 . + . ID=rna-JYJ20_RS08985;Parent=gene-JYJ20_RS08985;anticodon=(pos:8308..8310);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS08985;product=tRNA-Arg NZ_JAFIRP010000026.1 tRNAscan-SE exon 8274 8350 . + . ID=exon-JYJ20_RS08985-1;Parent=rna-JYJ20_RS08985;anticodon=(pos:8308..8310);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS08985;product=tRNA-Arg NZ_JAFIRP010000026.1 RefSeq gene 8510 9808 . - . ID=gene-JYJ20_RS08990;Name=purA;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=JYJ20_RS08990 NZ_JAFIRP010000026.1 Protein Homology CDS 8510 9808 . - 0 ID=cds-WP_006250049.1;Parent=gene-JYJ20_RS08990;Dbxref=GenBank:WP_006250049.1;Name=WP_006250049.1;Ontology_term=GO:0009152,GO:0004019;gbkey=CDS;gene=purA;go_function=adenylosuccinate synthase activity|0004019||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010869263.1;locus_tag=JYJ20_RS08990;product=adenylosuccinate synthase;protein_id=WP_006250049.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 9982 10869 . - . ID=gene-JYJ20_RS08995;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=JYJ20_RS08995 NZ_JAFIRP010000026.1 Protein Homology CDS 9982 10869 . - 0 ID=cds-WP_006250047.1;Parent=gene-JYJ20_RS08995;Dbxref=GenBank:WP_006250047.1;Name=WP_006250047.1;Ontology_term=GO:0045861,GO:0030288;gbkey=CDS;gene=hflC;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=negative regulation of proteolysis|0045861||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991092.1;locus_tag=JYJ20_RS08995;product=protease modulator HflC;protein_id=WP_006250047.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 10872 12095 . - . ID=gene-JYJ20_RS09000;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=JYJ20_RS09000 NZ_JAFIRP010000026.1 Protein Homology CDS 10872 12095 . - 0 ID=cds-WP_006250046.1;Parent=gene-JYJ20_RS09000;Dbxref=GenBank:WP_006250046.1;Name=WP_006250046.1;Ontology_term=GO:0045861,GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;go_process=negative regulation of proteolysis|0045861||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251657.1;locus_tag=JYJ20_RS09000;product=FtsH protease activity modulator HflK;protein_id=WP_006250046.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 12266 12595 . - . ID=gene-JYJ20_RS09005;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=JYJ20_RS09005 NZ_JAFIRP010000026.1 Protein Homology CDS 12266 12595 . - 0 ID=cds-WP_006250045.1;Parent=gene-JYJ20_RS09005;Dbxref=GenBank:WP_006250045.1;Name=WP_006250045.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250045.1;locus_tag=JYJ20_RS09005;product=thioredoxin;protein_id=WP_006250045.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 12850 13521 . - . ID=gene-JYJ20_RS09010;Name=JYJ20_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09010 NZ_JAFIRP010000026.1 Protein Homology CDS 12850 13521 . - 0 ID=cds-WP_006253592.1;Parent=gene-JYJ20_RS09010;Dbxref=GenBank:WP_006253592.1;Name=WP_006253592.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608297.1;locus_tag=JYJ20_RS09010;product=OmpW/AlkL family protein;protein_id=WP_006253592.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 13776 16343 . + . ID=gene-JYJ20_RS09015;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=JYJ20_RS09015 NZ_JAFIRP010000026.1 Protein Homology CDS 13776 16343 . + 0 ID=cds-WP_006249856.1;Parent=gene-JYJ20_RS09015;Dbxref=GenBank:WP_006249856.1;Name=WP_006249856.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249856.1;locus_tag=JYJ20_RS09015;product=ATP-dependent chaperone ClpB;protein_id=WP_006249856.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 16557 17699 . + . ID=gene-JYJ20_RS09020;Name=JYJ20_RS09020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09020 NZ_JAFIRP010000026.1 Protein Homology CDS 16557 17699 . + 0 ID=cds-WP_006249857.1;Parent=gene-JYJ20_RS09020;Dbxref=GenBank:WP_006249857.1;Name=WP_006249857.1;Ontology_term=GO:0071265,GO:0003871,GO:0008270;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251668.1;locus_tag=JYJ20_RS09020;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_006249857.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 17756 19144 . - . ID=gene-JYJ20_RS09025;Name=JYJ20_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09025 NZ_JAFIRP010000026.1 Protein Homology CDS 17756 19144 . - 0 ID=cds-WP_209026179.1;Parent=gene-JYJ20_RS09025;Dbxref=GenBank:WP_209026179.1;Name=WP_209026179.1;Ontology_term=GO:0006820,GO:0008509,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253591.1;locus_tag=JYJ20_RS09025;product=DASS family sodium-coupled anion symporter;protein_id=WP_209026179.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 19304 20203 . - . ID=gene-JYJ20_RS09030;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=JYJ20_RS09030 NZ_JAFIRP010000026.1 Protein Homology CDS 19304 20203 . - 0 ID=cds-WP_006253590.1;Parent=gene-JYJ20_RS09030;Dbxref=GenBank:WP_006253590.1;Name=WP_006253590.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253590.1;locus_tag=JYJ20_RS09030;product=cytidine deaminase;protein_id=WP_006253590.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 20217 21119 . - . ID=gene-JYJ20_RS09035;Name=JYJ20_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09035 NZ_JAFIRP010000026.1 Protein Homology CDS 20217 21119 . - 0 ID=cds-WP_006249771.1;Parent=gene-JYJ20_RS09035;Dbxref=GenBank:WP_006249771.1;Name=WP_006249771.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249771.1;locus_tag=JYJ20_RS09035;product=DMT family transporter;protein_id=WP_006249771.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 21116 21472 . - . ID=gene-JYJ20_RS09040;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=JYJ20_RS09040 NZ_JAFIRP010000026.1 Protein Homology CDS 21116 21472 . - 0 ID=cds-WP_006249772.1;Parent=gene-JYJ20_RS09040;Dbxref=GenBank:WP_006249772.1;Name=WP_006249772.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249772.1;locus_tag=JYJ20_RS09040;product=dihydroneopterin aldolase;protein_id=WP_006249772.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 21542 22147 . + . ID=gene-JYJ20_RS09045;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=JYJ20_RS09045 NZ_JAFIRP010000026.1 Protein Homology CDS 21542 22147 . + 0 ID=cds-WP_006249773.1;Parent=gene-JYJ20_RS09045;Dbxref=GenBank:WP_006249773.1;Name=WP_006249773.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249773.1;locus_tag=JYJ20_RS09045;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_006249773.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 22221 24128 . - . ID=gene-JYJ20_RS09050;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=JYJ20_RS09050 NZ_JAFIRP010000026.1 Protein Homology CDS 22221 24128 . - 0 ID=cds-WP_006249774.1;Parent=gene-JYJ20_RS09050;Dbxref=GenBank:WP_006249774.1;Name=WP_006249774.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875262.1;locus_tag=JYJ20_RS09050;product=DNA topoisomerase IV subunit B;protein_id=WP_006249774.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 24336 24560 . + . ID=gene-JYJ20_RS09055;Name=JYJ20_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09055 NZ_JAFIRP010000026.1 Protein Homology CDS 24336 24560 . + 0 ID=cds-WP_006249776.1;Parent=gene-JYJ20_RS09055;Dbxref=GenBank:WP_006249776.1;Name=WP_006249776.1;Ontology_term=GO:0003729;gbkey=CDS;go_function=mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249776.1;locus_tag=JYJ20_RS09055;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_006249776.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 24603 24932 . + . ID=gene-JYJ20_RS09060;Name=JYJ20_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09060 NZ_JAFIRP010000026.1 Protein Homology CDS 24603 24932 . + 0 ID=cds-WP_006249777.1;Parent=gene-JYJ20_RS09060;Dbxref=GenBank:WP_006249777.1;Name=WP_006249777.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249777.1;locus_tag=JYJ20_RS09060;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_006249777.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 24971 25357 . - . ID=gene-JYJ20_RS09065;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=JYJ20_RS09065 NZ_JAFIRP010000026.1 Protein Homology CDS 24971 25357 . - 0 ID=cds-WP_006249778.1;Parent=gene-JYJ20_RS09065;Dbxref=GenBank:WP_006249778.1;Name=WP_006249778.1;Ontology_term=GO:0045893,GO:0046688,GO:0003677,GO:0003700,GO:0005507;gbkey=CDS;gene=cueR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,copper ion binding|0005507||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249778.1;locus_tag=JYJ20_RS09065;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_006249778.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 25446 25646 . + . ID=gene-JYJ20_RS09070;Name=JYJ20_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09070 NZ_JAFIRP010000026.1 Protein Homology CDS 25446 25646 . + 0 ID=cds-WP_006249779.1;Parent=gene-JYJ20_RS09070;Dbxref=GenBank:WP_006249779.1;Name=WP_006249779.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249779.1;locus_tag=JYJ20_RS09070;product=heavy-metal-associated domain-containing protein;protein_id=WP_006249779.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 25699 27891 . + . ID=gene-JYJ20_RS09075;Name=JYJ20_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09075 NZ_JAFIRP010000026.1 Protein Homology CDS 25699 27891 . + 0 ID=cds-WP_006249780.1;Parent=gene-JYJ20_RS09075;Dbxref=GenBank:WP_006249780.1;Name=WP_006249780.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249780.1;locus_tag=JYJ20_RS09075;product=heavy metal translocating P-type ATPase;protein_id=WP_006249780.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 27944 28729 . - . ID=gene-JYJ20_RS09080;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=JYJ20_RS09080 NZ_JAFIRP010000026.1 Protein Homology CDS 27944 28729 . - 0 ID=cds-WP_006249781.1;Parent=gene-JYJ20_RS09080;Dbxref=GenBank:WP_006249781.1;Name=WP_006249781.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249781.1;locus_tag=JYJ20_RS09080;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_006249781.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 28794 29483 . - . ID=gene-JYJ20_RS09085;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=JYJ20_RS09085 NZ_JAFIRP010000026.1 Protein Homology CDS 28794 29483 . - 0 ID=cds-WP_006253589.1;Parent=gene-JYJ20_RS09085;Dbxref=GenBank:WP_006253589.1;Name=WP_006253589.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253589.1;locus_tag=JYJ20_RS09085;product=GTP cyclohydrolase I FolE;protein_id=WP_006253589.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 29584 30291 . + . ID=gene-JYJ20_RS09090;Name=JYJ20_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09090 NZ_JAFIRP010000026.1 Protein Homology CDS 29584 30291 . + 0 ID=cds-WP_006253588.1;Parent=gene-JYJ20_RS09090;Dbxref=GenBank:WP_006253588.1;Name=WP_006253588.1;Ontology_term=GO:0016773;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253588.1;locus_tag=JYJ20_RS09090;product=3-deoxy-D-manno-octulosonic acid kinase;protein_id=WP_006253588.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 30346 31443 . - . ID=gene-JYJ20_RS09095;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=JYJ20_RS09095 NZ_JAFIRP010000026.1 Protein Homology CDS 30346 31443 . - 0 ID=cds-WP_006247831.1;Parent=gene-JYJ20_RS09095;Dbxref=GenBank:WP_006247831.1;Name=WP_006247831.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617485.1;locus_tag=JYJ20_RS09095;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_006247831.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 31440 32987 . - . ID=gene-JYJ20_RS09100;Name=JYJ20_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09100 NZ_JAFIRP010000026.1 Protein Homology CDS 31440 32987 . - 0 ID=cds-WP_006247832.1;Parent=gene-JYJ20_RS09100;Dbxref=GenBank:WP_006247832.1;Name=WP_006247832.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247832.1;locus_tag=JYJ20_RS09100;product=peptide ABC transporter substrate-binding protein;protein_id=WP_006247832.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 33013 33663 . - . ID=gene-JYJ20_RS09105;Name=JYJ20_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09105 NZ_JAFIRP010000026.1 Protein Homology CDS 33013 33663 . - 0 ID=cds-WP_006247833.1;Parent=gene-JYJ20_RS09105;Dbxref=GenBank:WP_006247833.1;Name=WP_006247833.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247833.1;locus_tag=JYJ20_RS09105;product=YchE family NAAT transporter;protein_id=WP_006247833.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 33785 35656 . - . ID=gene-JYJ20_RS09110;Name=JYJ20_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09110 NZ_JAFIRP010000026.1 Protein Homology CDS 33785 35656 . - 0 ID=cds-WP_006247834.1;Parent=gene-JYJ20_RS09110;Dbxref=GenBank:WP_006247834.1;Name=WP_006247834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247834.1;locus_tag=JYJ20_RS09110;product=SurA N-terminal domain-containing protein;protein_id=WP_006247834.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 35838 36107 . + . ID=gene-JYJ20_RS09115;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=JYJ20_RS09115 NZ_JAFIRP010000026.1 Protein Homology CDS 35838 36107 . + 0 ID=cds-WP_005597777.1;Parent=gene-JYJ20_RS09115;Dbxref=GenBank:WP_005597777.1;Name=WP_005597777.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005759306.1;locus_tag=JYJ20_RS09115;product=30S ribosomal protein S15;protein_id=WP_005597777.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 36179 37048 . + . ID=gene-JYJ20_RS09120;Name=JYJ20_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09120 NZ_JAFIRP010000026.1 Protein Homology CDS 36179 37048 . + 0 ID=cds-WP_006247835.1;Parent=gene-JYJ20_RS09120;Dbxref=GenBank:WP_006247835.1;Name=WP_006247835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247835.1;locus_tag=JYJ20_RS09120;product=DUF808 domain-containing protein;protein_id=WP_006247835.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 37138 38403 . - . ID=gene-JYJ20_RS09125;Name=JYJ20_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09125 NZ_JAFIRP010000026.1 Protein Homology CDS 37138 38403 . - 0 ID=cds-WP_006247836.1;Parent=gene-JYJ20_RS09125;Dbxref=GenBank:WP_006247836.1;Name=WP_006247836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247836.1;locus_tag=JYJ20_RS09125;product=heme biosynthesis protein HemY;protein_id=WP_006247836.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 38422 39732 . - . ID=gene-JYJ20_RS09130;Name=JYJ20_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09130 NZ_JAFIRP010000026.1 Protein Homology CDS 38422 39732 . - 0 ID=cds-WP_006247837.1;Parent=gene-JYJ20_RS09130;Dbxref=GenBank:WP_006247837.1;Name=WP_006247837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247837.1;locus_tag=JYJ20_RS09130;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_006247837.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 39744 40508 . - . ID=gene-JYJ20_RS09135;Name=JYJ20_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09135 NZ_JAFIRP010000026.1 Protein Homology CDS 39744 40508 . - 0 ID=cds-WP_006247838.1;Parent=gene-JYJ20_RS09135;Dbxref=GenBank:WP_006247838.1;Name=WP_006247838.1;Ontology_term=GO:0006780,GO:0006782,GO:0033014,GO:0004852;gbkey=CDS;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA,protoporphyrinogen IX biosynthetic process|0006782||IEA,tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247838.1;locus_tag=JYJ20_RS09135;product=uroporphyrinogen-III synthase;protein_id=WP_006247838.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 40508 41443 . - . ID=gene-JYJ20_RS09140;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=JYJ20_RS09140 NZ_JAFIRP010000026.1 Protein Homology CDS 40508 41443 . - 0 ID=cds-WP_006247839.1;Parent=gene-JYJ20_RS09140;Dbxref=GenBank:WP_006247839.1;Name=WP_006247839.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247839.1;locus_tag=JYJ20_RS09140;product=hydroxymethylbilane synthase;protein_id=WP_006247839.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 41739 44348 . + . ID=gene-JYJ20_RS09145;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=JYJ20_RS09145 NZ_JAFIRP010000026.1 Protein Homology CDS 41739 44348 . + 0 ID=cds-WP_006253586.1;Parent=gene-JYJ20_RS09145;Dbxref=GenBank:WP_006253586.1;Name=WP_006253586.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247840.1;locus_tag=JYJ20_RS09145;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_006253586.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 44495 45391 . + . ID=gene-JYJ20_RS09150;Name=JYJ20_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09150 NZ_JAFIRP010000026.1 Protein Homology CDS 44495 45391 . + 0 ID=cds-WP_209026180.1;Parent=gene-JYJ20_RS09150;Dbxref=GenBank:WP_209026180.1;Name=WP_209026180.1;Ontology_term=GO:0032259,GO:0071265,GO:0008168,GO:0008270,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,zinc ion binding|0008270||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA,L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612495.1;locus_tag=JYJ20_RS09150;product=homocysteine S-methyltransferase family protein;protein_id=WP_209026180.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 45401 46810 . + . ID=gene-JYJ20_RS09155;Name=JYJ20_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09155 NZ_JAFIRP010000026.1 Protein Homology CDS 45401 46810 . + 0 ID=cds-WP_006247842.1;Parent=gene-JYJ20_RS09155;Dbxref=GenBank:WP_006247842.1;Name=WP_006247842.1;Ontology_term=GO:0006865,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011199731.1;locus_tag=JYJ20_RS09155;product=basic amino acid/polyamine antiporter;protein_id=WP_006247842.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 46917 48140 . + . ID=gene-JYJ20_RS09160;Name=JYJ20_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09160 NZ_JAFIRP010000026.1 Protein Homology CDS 46917 48140 . + 0 ID=cds-WP_006247843.1;Parent=gene-JYJ20_RS09160;Dbxref=GenBank:WP_006247843.1;Name=WP_006247843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252970.1;locus_tag=JYJ20_RS09160;product=DUF711 family protein;protein_id=WP_006247843.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 48178 49374 . - . ID=gene-JYJ20_RS09165;Name=JYJ20_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09165 NZ_JAFIRP010000026.1 Protein Homology CDS 48178 49374 . - 0 ID=cds-WP_006247844.1;Parent=gene-JYJ20_RS09165;Dbxref=GenBank:WP_006247844.1;Name=WP_006247844.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247844.1;locus_tag=JYJ20_RS09165;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_006247844.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 49394 49885 . - . ID=gene-JYJ20_RS09170;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=JYJ20_RS09170 NZ_JAFIRP010000026.1 Protein Homology CDS 49394 49885 . - 0 ID=cds-WP_006247845.1;Parent=gene-JYJ20_RS09170;Dbxref=GenBank:WP_006247845.1;Name=WP_006247845.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251847.1;locus_tag=JYJ20_RS09170;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_006247845.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 49885 50439 . - . ID=gene-JYJ20_RS09175;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=JYJ20_RS09175 NZ_JAFIRP010000026.1 Protein Homology CDS 49885 50439 . - 0 ID=cds-WP_006247846.1;Parent=gene-JYJ20_RS09175;Dbxref=GenBank:WP_006247846.1;Name=WP_006247846.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247846.1;locus_tag=JYJ20_RS09175;product=oligoribonuclease;protein_id=WP_006247846.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 50449 50928 . - . ID=gene-JYJ20_RS09180;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=JYJ20_RS09180 NZ_JAFIRP010000026.1 Protein Homology CDS 50449 50928 . - 0 ID=cds-WP_006247847.1;Parent=gene-JYJ20_RS09180;Dbxref=GenBank:WP_006247847.1;Name=WP_006247847.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247847.1;locus_tag=JYJ20_RS09180;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_006247847.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 50930 52210 . - . ID=gene-JYJ20_RS09185;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=JYJ20_RS09185 NZ_JAFIRP010000026.1 Protein Homology CDS 50930 52210 . - 0 ID=cds-WP_006247848.1;Parent=gene-JYJ20_RS09185;Dbxref=GenBank:WP_006247848.1;Name=WP_006247848.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875356.1;locus_tag=JYJ20_RS09185;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_006247848.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 52390 53769 . - . ID=gene-JYJ20_RS09190;Name=trhP;gbkey=Gene;gene=trhP;gene_biotype=protein_coding;gene_synonym=yegQ;locus_tag=JYJ20_RS09190 NZ_JAFIRP010000026.1 Protein Homology CDS 52390 53769 . - 0 ID=cds-WP_006247849.1;Parent=gene-JYJ20_RS09190;Dbxref=GenBank:WP_006247849.1;Name=WP_006247849.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhP;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247849.1;locus_tag=JYJ20_RS09190;product=prephenate-dependent tRNA uridine(34) hydroxylase TrhP;protein_id=WP_006247849.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 53897 54268 . + . ID=gene-JYJ20_RS09195;Name=JYJ20_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09195 NZ_JAFIRP010000026.1 Protein Homology CDS 53897 54268 . + 0 ID=cds-WP_006247850.1;Parent=gene-JYJ20_RS09195;Dbxref=GenBank:WP_006247850.1;Name=WP_006247850.1;Ontology_term=GO:0022900,GO:0005506,GO:0009055,GO:0020037,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,heme binding|0020037||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247850.1;locus_tag=JYJ20_RS09195;product=cytochrome b562;protein_id=WP_006247850.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 54307 57783 . - . ID=gene-JYJ20_RS09200;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=JYJ20_RS09200 NZ_JAFIRP010000026.1 Protein Homology CDS 54307 57783 . - 0 ID=cds-WP_006253585.1;Parent=gene-JYJ20_RS09200;Dbxref=GenBank:WP_006253585.1;Name=WP_006253585.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604838.1;locus_tag=JYJ20_RS09200;product=DNA polymerase III subunit alpha;protein_id=WP_006253585.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 58008 59105 . - . ID=gene-JYJ20_RS09205;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=JYJ20_RS09205 NZ_JAFIRP010000026.1 Protein Homology CDS 58008 59105 . - 0 ID=cds-WP_006247852.1;Parent=gene-JYJ20_RS09205;Dbxref=GenBank:WP_006247852.1;Name=WP_006247852.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652112.1;locus_tag=JYJ20_RS09205;product=LPS export ABC transporter permease LptG;protein_id=WP_006247852.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 59105 60214 . - . ID=gene-JYJ20_RS09210;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=JYJ20_RS09210 NZ_JAFIRP010000026.1 Protein Homology CDS 59105 60214 . - 0 ID=cds-WP_006247853.1;Parent=gene-JYJ20_RS09210;Dbxref=GenBank:WP_006247853.1;Name=WP_006247853.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005623714.1;locus_tag=JYJ20_RS09210;product=LPS export ABC transporter permease LptF;protein_id=WP_006247853.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 60388 61185 . - . ID=gene-JYJ20_RS09215;Name=JYJ20_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09215 NZ_JAFIRP010000026.1 Protein Homology CDS 60388 61185 . - 0 ID=cds-WP_015484131.1;Parent=gene-JYJ20_RS09215;Dbxref=GenBank:WP_015484131.1;Name=WP_015484131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251842.1;locus_tag=JYJ20_RS09215;product=hypothetical protein;protein_id=WP_015484131.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 61423 62919 . + . ID=gene-JYJ20_RS09220;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=JYJ20_RS09220 NZ_JAFIRP010000026.1 Protein Homology CDS 61423 62919 . + 0 ID=cds-WP_006247855.1;Parent=gene-JYJ20_RS09220;Dbxref=GenBank:WP_006247855.1;Name=WP_006247855.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251841.1;locus_tag=JYJ20_RS09220;product=leucyl aminopeptidase;protein_id=WP_006247855.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 63093 64040 . + . ID=gene-JYJ20_RS09225;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=JYJ20_RS09225 NZ_JAFIRP010000026.1 Protein Homology CDS 63093 64040 . + 0 ID=cds-WP_006247856.1;Parent=gene-JYJ20_RS09225;Dbxref=GenBank:WP_006247856.1;Name=WP_006247856.1;Ontology_term=GO:0019344,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015939738.1;locus_tag=JYJ20_RS09225;product=cysteine synthase A;protein_id=WP_006247856.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 64226 65488 . + . ID=gene-JYJ20_RS09230;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=JYJ20_RS09230 NZ_JAFIRP010000026.1 Protein Homology CDS 64226 65488 . + 0 ID=cds-WP_006253583.1;Parent=gene-JYJ20_RS09230;Dbxref=GenBank:WP_006253583.1;Name=WP_006253583.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014064140.1;locus_tag=JYJ20_RS09230;product=transcription termination factor Rho;protein_id=WP_006253583.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 65549 66667 . - . ID=gene-JYJ20_RS09235;Name=JYJ20_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09235 NZ_JAFIRP010000026.1 Protein Homology CDS 65549 66667 . - 0 ID=cds-WP_006247859.1;Parent=gene-JYJ20_RS09235;Dbxref=GenBank:WP_006247859.1;Name=WP_006247859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484736.1;locus_tag=JYJ20_RS09235;product=YdcF family protein;protein_id=WP_006247859.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 66680 68827 . - . ID=gene-JYJ20_RS09240;Name=JYJ20_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09240 NZ_JAFIRP010000026.1 Protein Homology CDS 66680 68827 . - 0 ID=cds-WP_006247860.1;Parent=gene-JYJ20_RS09240;Dbxref=GenBank:WP_006247860.1;Name=WP_006247860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247860.1;locus_tag=JYJ20_RS09240;product=autotransporter domain-containing protein;protein_id=WP_006247860.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 68827 70770 . - . ID=gene-JYJ20_RS09245;Name=JYJ20_RS09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09245 NZ_JAFIRP010000026.1 Protein Homology CDS 68827 70770 . - 0 ID=cds-WP_006247861.1;Parent=gene-JYJ20_RS09245;Dbxref=GenBank:WP_006247861.1;Name=WP_006247861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247861.1;locus_tag=JYJ20_RS09245;product=HTH domain-containing protein;protein_id=WP_006247861.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 71078 71644 . - . ID=gene-JYJ20_RS12225;Name=JYJ20_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12225 NZ_JAFIRP010000026.1 Protein Homology CDS 71078 71644 . - 0 ID=cds-WP_015484130.1;Parent=gene-JYJ20_RS12225;Dbxref=GenBank:WP_015484130.1;Name=WP_015484130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484130.1;locus_tag=JYJ20_RS12225;product=histidine-type phosphatase;protein_id=WP_015484130.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 71663 72340 . - . ID=gene-JYJ20_RS12230;Name=JYJ20_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12230 NZ_JAFIRP010000026.1 Protein Homology CDS 71663 72340 . - 0 ID=cds-WP_015587117.1;Parent=gene-JYJ20_RS12230;Dbxref=GenBank:WP_015587117.1;Name=WP_015587117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015587117.1;locus_tag=JYJ20_RS12230;product=histidine-type phosphatase;protein_id=WP_015587117.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 72388 73425 . - . ID=gene-JYJ20_RS09255;Name=JYJ20_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09255 NZ_JAFIRP010000026.1 Protein Homology CDS 72388 73425 . - 0 ID=cds-WP_209026181.1;Parent=gene-JYJ20_RS09255;Dbxref=GenBank:WP_209026181.1;Name=WP_209026181.1;Ontology_term=GO:0004721,GO:0004725;gbkey=CDS;go_function=phosphoprotein phosphatase activity|0004721||IEA,protein tyrosine phosphatase activity|0004725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251835.1;locus_tag=JYJ20_RS09255;product=tyrosine-protein phosphatase;protein_id=WP_209026181.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 73425 74231 . - . ID=gene-JYJ20_RS09260;Name=JYJ20_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09260 NZ_JAFIRP010000026.1 Protein Homology CDS 73425 74231 . - 0 ID=cds-WP_006247863.1;Parent=gene-JYJ20_RS09260;Dbxref=GenBank:WP_006247863.1;Name=WP_006247863.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247863.1;locus_tag=JYJ20_RS09260;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_006247863.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 74228 74995 . - . ID=gene-JYJ20_RS09265;Name=JYJ20_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09265 NZ_JAFIRP010000026.1 Protein Homology CDS 74228 74995 . - 0 ID=cds-WP_006247864.1;Parent=gene-JYJ20_RS09265;Dbxref=GenBank:WP_006247864.1;Name=WP_006247864.1;Ontology_term=GO:0009401,GO:0034219,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247864.1;locus_tag=JYJ20_RS09265;product=PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC;protein_id=WP_006247864.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 74998 75468 . - . ID=gene-JYJ20_RS09270;Name=JYJ20_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09270 NZ_JAFIRP010000026.1 Protein Homology CDS 74998 75468 . - 0 ID=cds-WP_032845282.1;Parent=gene-JYJ20_RS09270;Dbxref=GenBank:WP_032845282.1;Name=WP_032845282.1;Ontology_term=GO:0008643,GO:0009401,GO:0034219,GO:0008982,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251833.1;locus_tag=JYJ20_RS09270;product=PTS sugar transporter subunit IIB;protein_id=WP_032845282.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 75452 75883 . - . ID=gene-JYJ20_RS09275;Name=JYJ20_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09275 NZ_JAFIRP010000026.1 Protein Homology CDS 75452 75883 . - 0 ID=cds-WP_006247866.1;Parent=gene-JYJ20_RS09275;Dbxref=GenBank:WP_006247866.1;Name=WP_006247866.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247866.1;locus_tag=JYJ20_RS09275;product=PTS sugar transporter subunit IIA;protein_id=WP_006247866.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 76066 77250 . - . ID=gene-JYJ20_RS09280;Name=JYJ20_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09280 NZ_JAFIRP010000026.1 Protein Homology CDS 76066 77250 . - 0 ID=cds-WP_209026182.1;Parent=gene-JYJ20_RS09280;Dbxref=GenBank:WP_209026182.1;Name=WP_209026182.1;Ontology_term=GO:0006525,GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251832.1;locus_tag=JYJ20_RS09280;product=aspartate aminotransferase family protein;protein_id=WP_209026182.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 77263 78117 . - . ID=gene-JYJ20_RS09285;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=JYJ20_RS09285 NZ_JAFIRP010000026.1 Protein Homology CDS 77263 78117 . - 0 ID=cds-WP_006247868.1;Parent=gene-JYJ20_RS09285;Dbxref=GenBank:WP_006247868.1;Name=WP_006247868.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247868.1;locus_tag=JYJ20_RS09285;product=acetylglutamate kinase;protein_id=WP_006247868.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 78209 79150 . - . ID=gene-JYJ20_RS09290;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=JYJ20_RS09290 NZ_JAFIRP010000026.1 Protein Homology CDS 78209 79150 . - 0 ID=cds-WP_006247869.1;Parent=gene-JYJ20_RS09290;Dbxref=GenBank:WP_006247869.1;Name=WP_006247869.1;Ontology_term=GO:0006526,GO:0003942,GO:0005737;gbkey=CDS;gene=argC;go_component=cytoplasm|0005737||IEA;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251830.1;locus_tag=JYJ20_RS09290;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_006247869.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 79293 79910 . - . ID=gene-JYJ20_RS09295;Name=JYJ20_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09295 NZ_JAFIRP010000026.1 Protein Homology CDS 79293 79910 . - 0 ID=cds-WP_006247870.1;Parent=gene-JYJ20_RS09295;Dbxref=GenBank:WP_006247870.1;Name=WP_006247870.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650747.1;locus_tag=JYJ20_RS09295;product=glutathione S-transferase family protein;protein_id=WP_006247870.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 79994 81118 . - . ID=gene-JYJ20_RS09300;Name=JYJ20_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09300 NZ_JAFIRP010000026.1 Protein Homology CDS 79994 81118 . - 0 ID=cds-WP_006253582.1;Parent=gene-JYJ20_RS09300;Dbxref=GenBank:WP_006253582.1;Name=WP_006253582.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253582.1;locus_tag=JYJ20_RS09300;product=NADH-dependent flavin oxidoreductase;protein_id=WP_006253582.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 81182 81862 . - . ID=gene-JYJ20_RS09305;Name=JYJ20_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09305 NZ_JAFIRP010000026.1 Protein Homology CDS 81182 81862 . - 0 ID=cds-WP_006251827.1;Parent=gene-JYJ20_RS09305;Dbxref=GenBank:WP_006251827.1;Name=WP_006251827.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484737.1;locus_tag=JYJ20_RS09305;product=nitroreductase;protein_id=WP_006251827.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 81879 82310 . - . ID=gene-JYJ20_RS09310;Name=JYJ20_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09310 NZ_JAFIRP010000026.1 Protein Homology CDS 81879 82310 . - 0 ID=cds-WP_006247873.1;Parent=gene-JYJ20_RS09310;Dbxref=GenBank:WP_006247873.1;Name=WP_006247873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247873.1;locus_tag=JYJ20_RS09310;product=organic hydroperoxide resistance protein;protein_id=WP_006247873.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 82425 83276 . + . ID=gene-JYJ20_RS09315;Name=JYJ20_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09315 NZ_JAFIRP010000026.1 Protein Homology CDS 82425 83276 . + 0 ID=cds-WP_006247874.1;Parent=gene-JYJ20_RS09315;Dbxref=GenBank:WP_006247874.1;Name=WP_006247874.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247874.1;locus_tag=JYJ20_RS09315;product=AraC family transcriptional regulator;protein_id=WP_006247874.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 83352 84071 . - . ID=gene-JYJ20_RS09320;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=JYJ20_RS09320 NZ_JAFIRP010000026.1 Protein Homology CDS 83352 84071 . - 0 ID=cds-WP_006247875.1;Parent=gene-JYJ20_RS09320;Dbxref=GenBank:WP_006247875.1;Name=WP_006247875.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247875.1;locus_tag=JYJ20_RS09320;product=purine-nucleoside phosphorylase;protein_id=WP_006247875.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 84092 84868 . - . ID=gene-JYJ20_RS09325;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=JYJ20_RS09325 NZ_JAFIRP010000026.1 Protein Homology CDS 84092 84868 . - 0 ID=cds-WP_006247876.1;Parent=gene-JYJ20_RS09325;Dbxref=GenBank:WP_006247876.1;Name=WP_006247876.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991058.1;locus_tag=JYJ20_RS09325;product=deoxyribose-phosphate aldolase;protein_id=WP_006247876.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 85013 86275 . - . ID=gene-JYJ20_RS09330;Name=JYJ20_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09330 NZ_JAFIRP010000026.1 Protein Homology CDS 85013 86275 . - 0 ID=cds-WP_006247877.1;Parent=gene-JYJ20_RS09330;Dbxref=GenBank:WP_006247877.1;Name=WP_006247877.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251823.1;locus_tag=JYJ20_RS09330;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_006247877.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 86456 86962 . + . ID=gene-JYJ20_RS09335;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=JYJ20_RS09335 NZ_JAFIRP010000026.1 Protein Homology CDS 86456 86962 . + 0 ID=cds-WP_006247878.1;Parent=gene-JYJ20_RS09335;Dbxref=GenBank:WP_006247878.1;Name=WP_006247878.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247878.1;locus_tag=JYJ20_RS09335;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_006247878.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 86999 87799 . - . ID=gene-JYJ20_RS09340;Name=JYJ20_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09340 NZ_JAFIRP010000026.1 Protein Homology CDS 86999 87799 . - 0 ID=cds-WP_006247879.1;Parent=gene-JYJ20_RS09340;Dbxref=GenBank:WP_006247879.1;Name=WP_006247879.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597807.1;locus_tag=JYJ20_RS09340;product=glycosyltransferase family 2 protein;protein_id=WP_006247879.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 87799 88764 . - . ID=gene-JYJ20_RS09345;Name=JYJ20_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09345 NZ_JAFIRP010000026.1 Protein Homology CDS 87799 88764 . - 0 ID=cds-WP_006247880.1;Parent=gene-JYJ20_RS09345;Dbxref=GenBank:WP_006247880.1;Name=WP_006247880.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263066.1;locus_tag=JYJ20_RS09345;product=glycosyltransferase family 2 protein;protein_id=WP_006247880.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 88757 89944 . - . ID=gene-JYJ20_RS09350;Name=JYJ20_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09350 NZ_JAFIRP010000026.1 Protein Homology CDS 88757 89944 . - 0 ID=cds-WP_006247881.1;Parent=gene-JYJ20_RS09350;Dbxref=GenBank:WP_006247881.1;Name=WP_006247881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247881.1;locus_tag=JYJ20_RS09350;product=hypothetical protein;protein_id=WP_006247881.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 89955 90740 . - . ID=gene-JYJ20_RS09355;Name=JYJ20_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09355 NZ_JAFIRP010000026.1 Protein Homology CDS 89955 90740 . - 0 ID=cds-WP_006247882.1;Parent=gene-JYJ20_RS09355;Dbxref=GenBank:WP_006247882.1;Name=WP_006247882.1;Ontology_term=GO:1901271;gbkey=CDS;go_process=lipooligosaccharide biosynthetic process|1901271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247882.1;locus_tag=JYJ20_RS09355;product=glycosyltransferase family 25 protein;protein_id=WP_006247882.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 90742 91680 . - . ID=gene-JYJ20_RS09360;Name=JYJ20_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09360 NZ_JAFIRP010000026.1 Protein Homology CDS 90742 91680 . - 0 ID=cds-WP_006247883.1;Parent=gene-JYJ20_RS09360;Dbxref=GenBank:WP_006247883.1;Name=WP_006247883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014668079.1;locus_tag=JYJ20_RS09360;product=glycosyltransferase family 52;protein_id=WP_006247883.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 91677 92882 . - . ID=gene-JYJ20_RS09365;Name=JYJ20_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09365 NZ_JAFIRP010000026.1 Protein Homology CDS 91677 92882 . - 0 ID=cds-WP_006247884.1;Parent=gene-JYJ20_RS09365;Dbxref=GenBank:WP_006247884.1;Name=WP_006247884.1;Ontology_term=GO:0140327,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005635234.1;locus_tag=JYJ20_RS09365;product=flippase;protein_id=WP_006247884.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 92892 94076 . - . ID=gene-JYJ20_RS09370;Name=neuC;gbkey=Gene;gene=neuC;gene_biotype=protein_coding;locus_tag=JYJ20_RS09370 NZ_JAFIRP010000026.1 Protein Homology CDS 92892 94076 . - 0 ID=cds-WP_006247885.1;Parent=gene-JYJ20_RS09370;Dbxref=GenBank:WP_006247885.1;Name=WP_006247885.1;Ontology_term=GO:0006047,GO:0008761;gbkey=CDS;gene=neuC;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=UDP-N-acetylglucosamine metabolic process|0006047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247885.1;locus_tag=JYJ20_RS09370;product=UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_006247885.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 94077 95336 . - . ID=gene-JYJ20_RS09375;Name=JYJ20_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09375 NZ_JAFIRP010000026.1 Protein Homology CDS 94077 95336 . - 0 ID=cds-WP_006247886.1;Parent=gene-JYJ20_RS09375;Dbxref=GenBank:WP_006247886.1;Name=WP_006247886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251815.1;locus_tag=JYJ20_RS09375;product=cytidylyltransferase domain-containing protein;protein_id=WP_006247886.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 95396 96433 . - . ID=gene-JYJ20_RS09380;Name=neuB;gbkey=Gene;gene=neuB;gene_biotype=protein_coding;locus_tag=JYJ20_RS09380 NZ_JAFIRP010000026.1 Protein Homology CDS 95396 96433 . - 0 ID=cds-WP_006247887.1;Parent=gene-JYJ20_RS09380;Dbxref=GenBank:WP_006247887.1;Name=WP_006247887.1;Ontology_term=GO:0016051,GO:0003824;gbkey=CDS;gene=neuB;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate biosynthetic process|0016051||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247887.1;locus_tag=JYJ20_RS09380;product=N-acetylneuraminate synthase;protein_id=WP_006247887.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 96433 97077 . - . ID=gene-JYJ20_RS09385;Name=JYJ20_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09385 NZ_JAFIRP010000026.1 Protein Homology CDS 96433 97077 . - 0 ID=cds-WP_006247888.1;Parent=gene-JYJ20_RS09385;Dbxref=GenBank:WP_006247888.1;Name=WP_006247888.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247888.1;locus_tag=JYJ20_RS09385;product=acetyltransferase;protein_id=WP_006247888.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 97210 97953 . + . ID=gene-JYJ20_RS09390;Name=JYJ20_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09390 NZ_JAFIRP010000026.1 Protein Homology CDS 97210 97953 . + 0 ID=cds-WP_006247889.1;Parent=gene-JYJ20_RS09390;Dbxref=GenBank:WP_006247889.1;Name=WP_006247889.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615381.1;locus_tag=JYJ20_RS09390;product=YdcF family protein;protein_id=WP_006247889.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 98030 100243 . - . ID=gene-JYJ20_RS09395;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=JYJ20_RS09395 NZ_JAFIRP010000026.1 Protein Homology CDS 98030 100243 . - 0 ID=cds-WP_457852185.1;Parent=gene-JYJ20_RS09395;Dbxref=GenBank:WP_457852185.1;Name=WP_457852185.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010907037.1;locus_tag=JYJ20_RS09395;product=primosomal protein N';protein_id=WP_457852185.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq pseudogene 100240 100852 . - . ID=gene-JYJ20_RS09400;Name=JYJ20_RS09400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS09400;pseudo=true NZ_JAFIRP010000026.1 Protein Homology CDS 100240 100852 . - 0 ID=cds-JYJ20_RS09400;Parent=gene-JYJ20_RS09400;Note=frameshifted;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005818858.1;locus_tag=JYJ20_RS09400;product=LysE family translocator;pseudo=true;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 100845 101744 . - . ID=gene-JYJ20_RS09405;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=JYJ20_RS09405 NZ_JAFIRP010000026.1 Protein Homology CDS 100845 101744 . - 0 ID=cds-WP_006247891.1;Parent=gene-JYJ20_RS09405;Dbxref=GenBank:WP_006247891.1;Name=WP_006247891.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247891.1;locus_tag=JYJ20_RS09405;product=EamA family transporter RarD;protein_id=WP_006247891.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 101971 103188 . - . ID=gene-JYJ20_RS09410;Name=JYJ20_RS09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09410 NZ_JAFIRP010000026.1 Protein Homology CDS 101971 103188 . - 0 ID=cds-WP_006247892.1;Parent=gene-JYJ20_RS09410;Dbxref=GenBank:WP_006247892.1;Name=WP_006247892.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251809.1;locus_tag=JYJ20_RS09410;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_006247892.1;transl_table=11 NZ_JAFIRP010000026.1 RefSeq gene 103376 104680 . + . ID=gene-JYJ20_RS09415;Name=JYJ20_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09415 NZ_JAFIRP010000026.1 Protein Homology CDS 103376 104680 . + 0 ID=cds-WP_006247893.1;Parent=gene-JYJ20_RS09415;Dbxref=GenBank:WP_006247893.1;Name=WP_006247893.1;Ontology_term=GO:0008909;gbkey=CDS;go_function=isochorismate synthase activity|0008909||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252718.1;locus_tag=JYJ20_RS09415;product=isochorismate synthase;protein_id=WP_006247893.1;transl_table=11 ##sequence-region NZ_JAFIRP010000027.1 1 68229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000027.1 RefSeq region 1 68229 . + . ID=NZ_JAFIRP010000027.1:1..68229;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000027.1 RefSeq gene 1 176 . + . ID=gene-JYJ20_RS09420;Name=JYJ20_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09420;partial=true;start_range=.,1 NZ_JAFIRP010000027.1 Protein Homology CDS 1 176 . + 2 ID=cds-WP_044428505.1;Parent=gene-JYJ20_RS09420;Dbxref=GenBank:WP_044428505.1;Name=WP_044428505.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014325826.1;locus_tag=JYJ20_RS09420;partial=true;product=tyrosine-type recombinase/integrase;protein_id=WP_044428505.1;start_range=.,1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 219 746 . - . ID=gene-JYJ20_RS09425;Name=JYJ20_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09425 NZ_JAFIRP010000027.1 Protein Homology CDS 219 746 . - 0 ID=cds-WP_006250605.1;Parent=gene-JYJ20_RS09425;Dbxref=GenBank:WP_006250605.1;Name=WP_006250605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250605.1;locus_tag=JYJ20_RS09425;product=PBECR4 domain-containing protein;protein_id=WP_006250605.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq pseudogene 1255 1788 . - . ID=gene-JYJ20_RS09430;Name=JYJ20_RS09430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS09430;partial=true;pseudo=true;start_range=.,1255 NZ_JAFIRP010000027.1 Protein Homology CDS 1255 1788 . - 0 ID=cds-JYJ20_RS09430;Parent=gene-JYJ20_RS09430;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005700434.1;locus_tag=JYJ20_RS09430;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1255;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 1912 2775 . - . ID=gene-JYJ20_RS09435;Name=JYJ20_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09435 NZ_JAFIRP010000027.1 Protein Homology CDS 1912 2775 . - 0 ID=cds-WP_006248311.1;Parent=gene-JYJ20_RS09435;Dbxref=GenBank:WP_006248311.1;Name=WP_006248311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651782.1;locus_tag=JYJ20_RS09435;product=hypothetical protein;protein_id=WP_006248311.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 2947 3696 . + . ID=gene-JYJ20_RS09440;Name=JYJ20_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09440 NZ_JAFIRP010000027.1 Protein Homology CDS 2947 3696 . + 0 ID=cds-WP_006248309.1;Parent=gene-JYJ20_RS09440;Dbxref=GenBank:WP_006248309.1;Name=WP_006248309.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248309.1;locus_tag=JYJ20_RS09440;product=alpha/beta hydrolase;protein_id=WP_006248309.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 3698 4183 . - . ID=gene-JYJ20_RS09445;Name=JYJ20_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09445 NZ_JAFIRP010000027.1 Protein Homology CDS 3698 4183 . - 0 ID=cds-WP_044428393.1;Parent=gene-JYJ20_RS09445;Dbxref=GenBank:WP_044428393.1;Name=WP_044428393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251356.1;locus_tag=JYJ20_RS09445;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_044428393.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 4247 4792 . - . ID=gene-JYJ20_RS09450;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=JYJ20_RS09450 NZ_JAFIRP010000027.1 Protein Homology CDS 4247 4792 . - 0 ID=cds-WP_209026183.1;Parent=gene-JYJ20_RS09450;Dbxref=GenBank:WP_209026183.1;Name=WP_209026183.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251357.1;locus_tag=JYJ20_RS09450;product=endonuclease SmrB;protein_id=WP_209026183.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 4885 5829 . + . ID=gene-JYJ20_RS09455;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=JYJ20_RS09455 NZ_JAFIRP010000027.1 Protein Homology CDS 4885 5829 . + 0 ID=cds-WP_061887168.1;Parent=gene-JYJ20_RS09455;Dbxref=GenBank:WP_061887168.1;Name=WP_061887168.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251359.1;locus_tag=JYJ20_RS09455;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_061887168.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 5915 6820 . - . ID=gene-JYJ20_RS09460;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=JYJ20_RS09460 NZ_JAFIRP010000027.1 Protein Homology CDS 5915 6820 . - 0 ID=cds-WP_275044937.1;Parent=gene-JYJ20_RS09460;Dbxref=GenBank:WP_275044937.1;Name=WP_275044937.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248304.1;locus_tag=JYJ20_RS09460;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_275044937.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 6821 7126 . - . ID=gene-JYJ20_RS09465;Name=JYJ20_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09465 NZ_JAFIRP010000027.1 Protein Homology CDS 6821 7126 . - 0 ID=cds-WP_230268902.1;Parent=gene-JYJ20_RS09465;Dbxref=GenBank:WP_230268902.1;Name=WP_230268902.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025887.7;locus_tag=JYJ20_RS09465;product=nuclear transport factor 2 family protein;protein_id=WP_230268902.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 7153 7281 . - . ID=gene-JYJ20_RS12365;Name=JYJ20_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12365 NZ_JAFIRP010000027.1 GeneMarkS-2+ CDS 7153 7281 . - 0 ID=cds-WP_264177699.1;Parent=gene-JYJ20_RS12365;Dbxref=GenBank:WP_264177699.1;Name=WP_264177699.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS12365;product=hypothetical protein;protein_id=WP_264177699.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq pseudogene 7341 8422 . + . ID=gene-JYJ20_RS09470;Name=JYJ20_RS09470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS09470;pseudo=true NZ_JAFIRP010000027.1 Protein Homology CDS 7341 8422 . + 0 ID=cds-JYJ20_RS09470;Parent=gene-JYJ20_RS09470;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005822192.1;locus_tag=JYJ20_RS09470;product=MFS transporter;pseudo=true;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 8419 9552 . - . ID=gene-JYJ20_RS09475;Name=JYJ20_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09475 NZ_JAFIRP010000027.1 Protein Homology CDS 8419 9552 . - 0 ID=cds-WP_209026184.1;Parent=gene-JYJ20_RS09475;Dbxref=GenBank:WP_209026184.1;Name=WP_209026184.1;Ontology_term=GO:0006040,GO:0009254,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251060.1;locus_tag=JYJ20_RS09475;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_209026184.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 9744 10583 . - . ID=gene-JYJ20_RS09480;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=JYJ20_RS09480 NZ_JAFIRP010000027.1 Protein Homology CDS 9744 10583 . - 0 ID=cds-WP_006248299.1;Parent=gene-JYJ20_RS09480;Dbxref=GenBank:WP_006248299.1;Name=WP_006248299.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005623076.1;locus_tag=JYJ20_RS09480;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_006248299.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 10588 11136 . - . ID=gene-JYJ20_RS09485;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=JYJ20_RS09485 NZ_JAFIRP010000027.1 Protein Homology CDS 10588 11136 . - 0 ID=cds-WP_006248298.1;Parent=gene-JYJ20_RS09485;Dbxref=GenBank:WP_006248298.1;Name=WP_006248298.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248298.1;locus_tag=JYJ20_RS09485;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_006248298.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 11136 11603 . - . ID=gene-JYJ20_RS09490;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=JYJ20_RS09490 NZ_JAFIRP010000027.1 Protein Homology CDS 11136 11603 . - 0 ID=cds-WP_006248297.1;Parent=gene-JYJ20_RS09490;Dbxref=GenBank:WP_006248297.1;Name=WP_006248297.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248297.1;locus_tag=JYJ20_RS09490;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_006248297.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 11690 11887 . - . ID=gene-JYJ20_RS09495;Name=JYJ20_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09495 NZ_JAFIRP010000027.1 Protein Homology CDS 11690 11887 . - 0 ID=cds-WP_142778348.1;Parent=gene-JYJ20_RS09495;Dbxref=GenBank:WP_142778348.1;Name=WP_142778348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253140.1;locus_tag=JYJ20_RS09495;product=hypothetical protein;protein_id=WP_142778348.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 11856 12338 . - . ID=gene-JYJ20_RS09500;Name=JYJ20_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09500 NZ_JAFIRP010000027.1 Protein Homology CDS 11856 12338 . - 0 ID=cds-WP_209026185.1;Parent=gene-JYJ20_RS09500;Dbxref=GenBank:WP_209026185.1;Name=WP_209026185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253694.1;locus_tag=JYJ20_RS09500;product=virulence RhuM family protein;protein_id=WP_209026185.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 12481 13638 . - . ID=gene-JYJ20_RS09505;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=JYJ20_RS09505 NZ_JAFIRP010000027.1 Protein Homology CDS 12481 13638 . - 0 ID=cds-WP_006253695.1;Parent=gene-JYJ20_RS09505;Dbxref=GenBank:WP_006253695.1;Name=WP_006253695.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604493.1;locus_tag=JYJ20_RS09505;product=radical SAM family heme chaperone HemW;protein_id=WP_006253695.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 13860 15443 . + . ID=gene-JYJ20_RS09510;Name=JYJ20_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09510 NZ_JAFIRP010000027.1 Protein Homology CDS 13860 15443 . + 0 ID=cds-WP_006250190.1;Parent=gene-JYJ20_RS09510;Dbxref=GenBank:WP_006250190.1;Name=WP_006250190.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250190.1;locus_tag=JYJ20_RS09510;product=ABC transporter substrate-binding protein;protein_id=WP_006250190.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 15655 16608 . + . ID=gene-JYJ20_RS09515;Name=JYJ20_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09515 NZ_JAFIRP010000027.1 Protein Homology CDS 15655 16608 . + 0 ID=cds-WP_006250191.1;Parent=gene-JYJ20_RS09515;Dbxref=GenBank:WP_006250191.1;Name=WP_006250191.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651869.1;locus_tag=JYJ20_RS09515;product=ABC transporter permease;protein_id=WP_006250191.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 16610 18580 . + . ID=gene-JYJ20_RS09520;Name=JYJ20_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09520 NZ_JAFIRP010000027.1 Protein Homology CDS 16610 18580 . + 0 ID=cds-WP_006250192.1;Parent=gene-JYJ20_RS09520;Dbxref=GenBank:WP_006250192.1;Name=WP_006250192.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250192.1;locus_tag=JYJ20_RS09520;product=dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein;protein_id=WP_006250192.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 18595 19401 . + . ID=gene-JYJ20_RS09525;Name=JYJ20_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09525 NZ_JAFIRP010000027.1 Protein Homology CDS 18595 19401 . + 0 ID=cds-WP_209026186.1;Parent=gene-JYJ20_RS09525;Dbxref=GenBank:WP_209026186.1;Name=WP_209026186.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005623096.1;locus_tag=JYJ20_RS09525;product=ABC transporter ATP-binding protein;protein_id=WP_209026186.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 19464 21050 . + . ID=gene-JYJ20_RS09530;Name=JYJ20_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09530 NZ_JAFIRP010000027.1 Protein Homology CDS 19464 21050 . + 0 ID=cds-WP_209026187.1;Parent=gene-JYJ20_RS09530;Dbxref=GenBank:WP_209026187.1;Name=WP_209026187.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250194.1;locus_tag=JYJ20_RS09530;product=FAD-dependent oxidoreductase;protein_id=WP_209026187.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 21096 22478 . + . ID=gene-JYJ20_RS09535;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=JYJ20_RS09535 NZ_JAFIRP010000027.1 Protein Homology CDS 21096 22478 . + 0 ID=cds-WP_209026188.1;Parent=gene-JYJ20_RS09535;Dbxref=GenBank:WP_209026188.1;Name=WP_209026188.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251071.1;locus_tag=JYJ20_RS09535;product=Na+/H+ antiporter NhaC;protein_id=WP_209026188.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 22521 23717 . - . ID=gene-JYJ20_RS09540;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=JYJ20_RS09540 NZ_JAFIRP010000027.1 Protein Homology CDS 22521 23717 . - 0 ID=cds-WP_006250196.1;Parent=gene-JYJ20_RS09540;Dbxref=GenBank:WP_006250196.1;Name=WP_006250196.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620038.1;locus_tag=JYJ20_RS09540;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_006250196.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 23836 26034 . - . ID=gene-JYJ20_RS09545;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=JYJ20_RS09545 NZ_JAFIRP010000027.1 Protein Homology CDS 23836 26034 . - 0 ID=cds-WP_006253698.1;Parent=gene-JYJ20_RS09545;Dbxref=GenBank:WP_006253698.1;Name=WP_006253698.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607154.1;locus_tag=JYJ20_RS09545;product=GTP diphosphokinase;protein_id=WP_006253698.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 26288 27595 . + . ID=gene-JYJ20_RS09550;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=JYJ20_RS09550 NZ_JAFIRP010000027.1 Protein Homology CDS 26288 27595 . + 0 ID=cds-WP_006250199.1;Parent=gene-JYJ20_RS09550;Dbxref=GenBank:WP_006250199.1;Name=WP_006250199.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253143.1;locus_tag=JYJ20_RS09550;product=glutamyl-tRNA reductase;protein_id=WP_006250199.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 27780 29315 . + . ID=gene-JYJ20_RS09555;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=JYJ20_RS09555 NZ_JAFIRP010000027.1 Protein Homology CDS 27780 29315 . + 0 ID=cds-WP_006250200.1;Parent=gene-JYJ20_RS09555;Dbxref=GenBank:WP_006250200.1;Name=WP_006250200.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614634.1;locus_tag=JYJ20_RS09555;product=ribosome biogenesis GTPase Der;protein_id=WP_006250200.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 29411 30838 . + . ID=gene-JYJ20_RS09560;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=JYJ20_RS09560 NZ_JAFIRP010000027.1 Protein Homology CDS 29411 30838 . + 0 ID=cds-WP_006250202.1;Parent=gene-JYJ20_RS09560;Dbxref=GenBank:WP_006250202.1;Name=WP_006250202.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250202.1;locus_tag=JYJ20_RS09560;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_006250202.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 30852 31406 . + . ID=gene-JYJ20_RS09565;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=JYJ20_RS09565 NZ_JAFIRP010000027.1 Protein Homology CDS 30852 31406 . + 0 ID=cds-WP_006250203.1;Parent=gene-JYJ20_RS09565;Dbxref=GenBank:WP_006250203.1;Name=WP_006250203.1;Ontology_term=GO:0009116;gbkey=CDS;gene=pyrR;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250203.1;locus_tag=JYJ20_RS09565;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_006250203.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 31485 32429 . + . ID=gene-JYJ20_RS09570;Name=JYJ20_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09570 NZ_JAFIRP010000027.1 Protein Homology CDS 31485 32429 . + 0 ID=cds-WP_006250204.1;Parent=gene-JYJ20_RS09570;Dbxref=GenBank:WP_006250204.1;Name=WP_006250204.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262807.1;locus_tag=JYJ20_RS09570;product=peptidylprolyl isomerase;protein_id=WP_006250204.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 32491 33357 . + . ID=gene-JYJ20_RS09575;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=JYJ20_RS09575 NZ_JAFIRP010000027.1 Protein Homology CDS 32491 33357 . + 0 ID=cds-WP_006250205.1;Parent=gene-JYJ20_RS09575;Dbxref=GenBank:WP_006250205.1;Name=WP_006250205.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251079.1;locus_tag=JYJ20_RS09575;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_006250205.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 33468 34097 . - . ID=gene-JYJ20_RS09580;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=JYJ20_RS09580 NZ_JAFIRP010000027.1 Protein Homology CDS 33468 34097 . - 0 ID=cds-WP_006250206.1;Parent=gene-JYJ20_RS09580;Dbxref=GenBank:WP_006250206.1;Name=WP_006250206.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=JYJ20_RS09580;product=uracil phosphoribosyltransferase;protein_id=WP_006250206.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 34122 35807 . - . ID=gene-JYJ20_RS09585;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=JYJ20_RS09585 NZ_JAFIRP010000027.1 Protein Homology CDS 34122 35807 . - 0 ID=cds-WP_006250207.1;Parent=gene-JYJ20_RS09585;Dbxref=GenBank:WP_006250207.1;Name=WP_006250207.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253146.1;locus_tag=JYJ20_RS09585;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_006250207.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 35785 36249 . - . ID=gene-JYJ20_RS09590;Name=JYJ20_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09590 NZ_JAFIRP010000027.1 Protein Homology CDS 35785 36249 . - 0 ID=cds-WP_006251081.1;Parent=gene-JYJ20_RS09590;Dbxref=GenBank:WP_006251081.1;Name=WP_006251081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250208.1;locus_tag=JYJ20_RS09590;product=SoxR reducing system RseC family protein;protein_id=WP_006251081.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 36246 37229 . - . ID=gene-JYJ20_RS09595;Name=JYJ20_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09595 NZ_JAFIRP010000027.1 Protein Homology CDS 36246 37229 . - 0 ID=cds-WP_006250209.1;Parent=gene-JYJ20_RS09595;Dbxref=GenBank:WP_006250209.1;Name=WP_006250209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250209.1;locus_tag=JYJ20_RS09595;product=MucB/RseB C-terminal domain-containing protein;protein_id=WP_006250209.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 37387 38010 . - . ID=gene-JYJ20_RS09600;Name=JYJ20_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09600 NZ_JAFIRP010000027.1 Protein Homology CDS 37387 38010 . - 0 ID=cds-WP_134916582.1;Parent=gene-JYJ20_RS09600;Dbxref=GenBank:WP_134916582.1;Name=WP_134916582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251083.1;locus_tag=JYJ20_RS09600;product=sigma-E factor negative regulatory protein;protein_id=WP_134916582.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 38056 38628 . - . ID=gene-JYJ20_RS09605;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=JYJ20_RS09605 NZ_JAFIRP010000027.1 Protein Homology CDS 38056 38628 . - 0 ID=cds-WP_209026189.1;Parent=gene-JYJ20_RS09605;Dbxref=GenBank:WP_209026189.1;Name=WP_209026189.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251084.1;locus_tag=JYJ20_RS09605;product=RNA polymerase sigma factor RpoE;protein_id=WP_209026189.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 38850 40394 . - . ID=gene-JYJ20_RS09610;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=JYJ20_RS09610 NZ_JAFIRP010000027.1 Protein Homology CDS 38850 40394 . - 0 ID=cds-WP_006249367.1;Parent=gene-JYJ20_RS09610;Dbxref=GenBank:WP_006249367.1;Name=WP_006249367.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249367.1;locus_tag=JYJ20_RS09610;product=2-isopropylmalate synthase;protein_id=WP_006249367.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 40888 41703 . + . ID=gene-JYJ20_RS09615;Name=JYJ20_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09615 NZ_JAFIRP010000027.1 Protein Homology CDS 40888 41703 . + 0 ID=cds-WP_209026190.1;Parent=gene-JYJ20_RS09615;Dbxref=GenBank:WP_209026190.1;Name=WP_209026190.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600497.1;locus_tag=JYJ20_RS09615;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_209026190.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 41769 42932 . + . ID=gene-JYJ20_RS09620;Name=JYJ20_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09620 NZ_JAFIRP010000027.1 Protein Homology CDS 41769 42932 . + 0 ID=cds-WP_006249365.1;Parent=gene-JYJ20_RS09620;Dbxref=GenBank:WP_006249365.1;Name=WP_006249365.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596405.1;locus_tag=JYJ20_RS09620;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_006249365.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq pseudogene 43045 43988 . - . ID=gene-JYJ20_RS09625;Name=JYJ20_RS09625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS09625;pseudo=true NZ_JAFIRP010000027.1 Protein Homology CDS 43045 43988 . - 0 ID=cds-JYJ20_RS09625;Parent=gene-JYJ20_RS09625;Note=frameshifted;Ontology_term=GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251085.1;locus_tag=JYJ20_RS09625;product=bile acid:sodium symporter family protein;pseudo=true;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 44136 44957 . + . ID=gene-JYJ20_RS09630;Name=JYJ20_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09630 NZ_JAFIRP010000027.1 Protein Homology CDS 44136 44957 . + 0 ID=cds-WP_006253700.1;Parent=gene-JYJ20_RS09630;Dbxref=GenBank:WP_006253700.1;Name=WP_006253700.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253700.1;locus_tag=JYJ20_RS09630;product=5'-nucleotidase%2C lipoprotein e(P4) family;protein_id=WP_006253700.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 45096 46376 . + . ID=gene-JYJ20_RS09635;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=JYJ20_RS09635 NZ_JAFIRP010000027.1 Protein Homology CDS 45096 46376 . + 0 ID=cds-WP_006249814.1;Parent=gene-JYJ20_RS09635;Dbxref=GenBank:WP_006249814.1;Name=WP_006249814.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251087.1;locus_tag=JYJ20_RS09635;product=aminopeptidase PepB;protein_id=WP_006249814.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 46427 46909 . + . ID=gene-JYJ20_RS09640;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=JYJ20_RS09640 NZ_JAFIRP010000027.1 Protein Homology CDS 46427 46909 . + 0 ID=cds-WP_006249813.1;Parent=gene-JYJ20_RS09640;Dbxref=GenBank:WP_006249813.1;Name=WP_006249813.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249813.1;locus_tag=JYJ20_RS09640;product=transcription elongation factor GreB;protein_id=WP_006249813.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 46951 50475 . - . ID=gene-JYJ20_RS09645;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=JYJ20_RS09645 NZ_JAFIRP010000027.1 Protein Homology CDS 46951 50475 . - 0 ID=cds-WP_006249812.1;Parent=gene-JYJ20_RS09645;Dbxref=GenBank:WP_006249812.1;Name=WP_006249812.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524,GO:0008854,GO:0009338;gbkey=CDS;gene=recB;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253147.1;locus_tag=JYJ20_RS09645;product=exodeoxyribonuclease V subunit beta;protein_id=WP_006249812.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 50534 51925 . - . ID=gene-JYJ20_RS09650;Name=JYJ20_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09650 NZ_JAFIRP010000027.1 Protein Homology CDS 50534 51925 . - 0 ID=cds-WP_209026191.1;Parent=gene-JYJ20_RS09650;Dbxref=GenBank:WP_209026191.1;Name=WP_209026191.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651718.1;locus_tag=JYJ20_RS09650;product=MATE family efflux transporter;protein_id=WP_209026191.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 52061 53155 . - . ID=gene-JYJ20_RS09655;Name=JYJ20_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09655 NZ_JAFIRP010000027.1 Protein Homology CDS 52061 53155 . - 0 ID=cds-WP_006253149.1;Parent=gene-JYJ20_RS09655;Dbxref=GenBank:WP_006253149.1;Name=WP_006253149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651719.1;locus_tag=JYJ20_RS09655;product=extracellular solute-binding protein;protein_id=WP_006253149.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 53377 53973 . + . ID=gene-JYJ20_RS09660;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=JYJ20_RS09660 NZ_JAFIRP010000027.1 Protein Homology CDS 53377 53973 . + 0 ID=cds-WP_006251091.1;Parent=gene-JYJ20_RS09660;Dbxref=GenBank:WP_006251091.1;Name=WP_006251091.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251091.1;locus_tag=JYJ20_RS09660;product=nucleotide exchange factor GrpE;protein_id=WP_006251091.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 54071 54340 . + . ID=gene-JYJ20_RS09665;Name=JYJ20_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09665 NZ_JAFIRP010000027.1 Protein Homology CDS 54071 54340 . + 0 ID=cds-WP_006251092.1;Parent=gene-JYJ20_RS09665;Dbxref=GenBank:WP_006251092.1;Name=WP_006251092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251092.1;locus_tag=JYJ20_RS09665;product=CCDC90 family protein;protein_id=WP_006251092.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 54403 54855 . + . ID=gene-JYJ20_RS09670;Name=JYJ20_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09670 NZ_JAFIRP010000027.1 Protein Homology CDS 54403 54855 . + 0 ID=cds-WP_006250137.1;Parent=gene-JYJ20_RS09670;Dbxref=GenBank:WP_006250137.1;Name=WP_006250137.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253150.1;locus_tag=JYJ20_RS09670;product=DUF441 domain-containing protein;protein_id=WP_006250137.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 54959 58945 . + . ID=gene-JYJ20_RS09675;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=JYJ20_RS09675 NZ_JAFIRP010000027.1 Protein Homology CDS 54959 58945 . + 0 ID=cds-WP_209026192.1;Parent=gene-JYJ20_RS09675;Dbxref=GenBank:WP_209026192.1;Name=WP_209026192.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250136.1;locus_tag=JYJ20_RS09675;product=ATP-dependent RNA helicase HrpA;protein_id=WP_209026192.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 59194 61998 . + . ID=gene-JYJ20_RS09680;Name=JYJ20_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09680 NZ_JAFIRP010000027.1 Protein Homology CDS 59194 61998 . + 0 ID=cds-WP_209026193.1;Parent=gene-JYJ20_RS09680;Dbxref=GenBank:WP_209026193.1;Name=WP_209026193.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250135.1;locus_tag=JYJ20_RS09680;product=S8 family peptidase;protein_id=WP_209026193.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 62139 62576 . - . ID=gene-JYJ20_RS09685;Name=JYJ20_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09685 NZ_JAFIRP010000027.1 Protein Homology CDS 62139 62576 . - 0 ID=cds-WP_006250134.1;Parent=gene-JYJ20_RS09685;Dbxref=GenBank:WP_006250134.1;Name=WP_006250134.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253195.1;locus_tag=JYJ20_RS09685;product=NfeD family protein;protein_id=WP_006250134.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 62612 63532 . - . ID=gene-JYJ20_RS09690;Name=JYJ20_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09690 NZ_JAFIRP010000027.1 Protein Homology CDS 62612 63532 . - 0 ID=cds-WP_006250133.1;Parent=gene-JYJ20_RS09690;Dbxref=GenBank:WP_006250133.1;Name=WP_006250133.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250133.1;locus_tag=JYJ20_RS09690;product=SPFH domain-containing protein;protein_id=WP_006250133.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 63548 64237 . - . ID=gene-JYJ20_RS09695;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=JYJ20_RS09695 NZ_JAFIRP010000027.1 Protein Homology CDS 63548 64237 . - 0 ID=cds-WP_006250132.1;Parent=gene-JYJ20_RS09695;Dbxref=GenBank:WP_006250132.1;Name=WP_006250132.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250132.1;locus_tag=JYJ20_RS09695;product=uracil-DNA glycosylase;protein_id=WP_006250132.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 64396 64779 . + . ID=gene-JYJ20_RS09700;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=JYJ20_RS09700 NZ_JAFIRP010000027.1 Protein Homology CDS 64396 64779 . + 0 ID=cds-WP_006251097.1;Parent=gene-JYJ20_RS09700;Dbxref=GenBank:WP_006251097.1;Name=WP_006251097.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005718923.1;locus_tag=JYJ20_RS09700;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_006251097.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 64953 65411 . + . ID=gene-JYJ20_RS09705;Name=JYJ20_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09705 NZ_JAFIRP010000027.1 Protein Homology CDS 64953 65411 . + 0 ID=cds-WP_006251098.1;Parent=gene-JYJ20_RS09705;Dbxref=GenBank:WP_006251098.1;Name=WP_006251098.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596354.1;locus_tag=JYJ20_RS09705;product=LexA family protein;protein_id=WP_006251098.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 65478 66050 . - . ID=gene-JYJ20_RS09710;Name=JYJ20_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09710 NZ_JAFIRP010000027.1 Protein Homology CDS 65478 66050 . - 0 ID=cds-WP_006249300.1;Parent=gene-JYJ20_RS09710;Dbxref=GenBank:WP_006249300.1;Name=WP_006249300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251099.1;locus_tag=JYJ20_RS09710;product=NlpC/P60 family protein;protein_id=WP_006249300.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 66190 67035 . - . ID=gene-JYJ20_RS09715;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=JYJ20_RS09715 NZ_JAFIRP010000027.1 Protein Homology CDS 66190 67035 . - 0 ID=cds-WP_006249299.1;Parent=gene-JYJ20_RS09715;Dbxref=GenBank:WP_006249299.1;Name=WP_006249299.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249299.1;locus_tag=JYJ20_RS09715;product=deoxyribonuclease IV;protein_id=WP_006249299.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 67094 67663 . + . ID=gene-JYJ20_RS09720;Name=JYJ20_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09720 NZ_JAFIRP010000027.1 Protein Homology CDS 67094 67663 . + 0 ID=cds-WP_006249298.1;Parent=gene-JYJ20_RS09720;Dbxref=GenBank:WP_006249298.1;Name=WP_006249298.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600457.1;locus_tag=JYJ20_RS09720;product=TorD/DmsD family molecular chaperone;protein_id=WP_006249298.1;transl_table=11 NZ_JAFIRP010000027.1 RefSeq gene 67692 68072 . + . ID=gene-JYJ20_RS09725;Name=JYJ20_RS09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09725 NZ_JAFIRP010000027.1 Protein Homology CDS 67692 68072 . + 0 ID=cds-WP_209026194.1;Parent=gene-JYJ20_RS09725;Dbxref=GenBank:WP_209026194.1;Name=WP_209026194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249297.1;locus_tag=JYJ20_RS09725;product=hypothetical protein;protein_id=WP_209026194.1;transl_table=11 ##sequence-region NZ_JAFIRP010000028.1 1 38379 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000028.1 RefSeq region 1 38379 . + . ID=NZ_JAFIRP010000028.1:1..38379;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000028.1 RefSeq gene 43 984 . + . ID=gene-JYJ20_RS09730;Name=JYJ20_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09730 NZ_JAFIRP010000028.1 Protein Homology CDS 43 984 . + 0 ID=cds-WP_209026195.1;Parent=gene-JYJ20_RS09730;Dbxref=GenBank:WP_209026195.1;Name=WP_209026195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340815.1;locus_tag=JYJ20_RS09730;product=TIGR03756 family integrating conjugative element protein;protein_id=WP_209026195.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 1002 3008 . + . ID=gene-JYJ20_RS09735;Name=JYJ20_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09735 NZ_JAFIRP010000028.1 Protein Homology CDS 1002 3008 . + 0 ID=cds-WP_209026196.1;Parent=gene-JYJ20_RS09735;Dbxref=GenBank:WP_209026196.1;Name=WP_209026196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251604.1;locus_tag=JYJ20_RS09735;product=integrating conjugative element protein;protein_id=WP_209026196.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 3029 3457 . + . ID=gene-JYJ20_RS09740;Name=JYJ20_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09740 NZ_JAFIRP010000028.1 Protein Homology CDS 3029 3457 . + 0 ID=cds-WP_006251605.1;Parent=gene-JYJ20_RS09740;Dbxref=GenBank:WP_006251605.1;Name=WP_006251605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340817.1;locus_tag=JYJ20_RS09740;product=hypothetical protein;protein_id=WP_006251605.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 3622 3894 . + . ID=gene-JYJ20_RS09745;Name=JYJ20_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09745 NZ_JAFIRP010000028.1 Protein Homology CDS 3622 3894 . + 0 ID=cds-WP_006248908.1;Parent=gene-JYJ20_RS09745;Dbxref=GenBank:WP_006248908.1;Name=WP_006248908.1;Ontology_term=GO:0006355,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248908.1;locus_tag=JYJ20_RS09745;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_006248908.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 3894 4388 . + . ID=gene-JYJ20_RS09750;Name=JYJ20_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09750 NZ_JAFIRP010000028.1 Protein Homology CDS 3894 4388 . + 0 ID=cds-WP_209026197.1;Parent=gene-JYJ20_RS09750;Dbxref=GenBank:WP_209026197.1;Name=WP_209026197.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248907.1;locus_tag=JYJ20_RS09750;product=GNAT family N-acetyltransferase;protein_id=WP_209026197.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 4401 4718 . + . ID=gene-JYJ20_RS09755;Name=JYJ20_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09755 NZ_JAFIRP010000028.1 Protein Homology CDS 4401 4718 . + 0 ID=cds-WP_209026198.1;Parent=gene-JYJ20_RS09755;Dbxref=GenBank:WP_209026198.1;Name=WP_209026198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248906.1;locus_tag=JYJ20_RS09755;product=hypothetical protein;protein_id=WP_209026198.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 4927 5172 . + . ID=gene-JYJ20_RS09760;Name=JYJ20_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09760 NZ_JAFIRP010000028.1 Protein Homology CDS 4927 5172 . + 0 ID=cds-WP_006253393.1;Parent=gene-JYJ20_RS09760;Dbxref=GenBank:WP_006253393.1;Name=WP_006253393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484613.1;locus_tag=JYJ20_RS09760;product=hypothetical protein;protein_id=WP_006253393.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 5391 6056 . + . ID=gene-JYJ20_RS09765;Name=JYJ20_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09765 NZ_JAFIRP010000028.1 Protein Homology CDS 5391 6056 . + 0 ID=cds-WP_209026199.1;Parent=gene-JYJ20_RS09765;Dbxref=GenBank:WP_209026199.1;Name=WP_209026199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251606.1;locus_tag=JYJ20_RS09765;product=DUF4852 domain-containing protein;protein_id=WP_209026199.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 6080 6487 . + . ID=gene-JYJ20_RS09770;Name=JYJ20_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09770 NZ_JAFIRP010000028.1 Protein Homology CDS 6080 6487 . + 0 ID=cds-WP_209026200.1;Parent=gene-JYJ20_RS09770;Dbxref=GenBank:WP_209026200.1;Name=WP_209026200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248904.1;locus_tag=JYJ20_RS09770;product=hypothetical protein;protein_id=WP_209026200.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 6515 8032 . - . ID=gene-JYJ20_RS09775;Name=JYJ20_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09775 NZ_JAFIRP010000028.1 Protein Homology CDS 6515 8032 . - 0 ID=cds-WP_209026207.1;Parent=gene-JYJ20_RS09775;Dbxref=GenBank:WP_209026207.1;Name=WP_209026207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484611.1;locus_tag=JYJ20_RS09775;product=conjugal transfer protein TraG N-terminal domain-containing protein;protein_id=WP_209026207.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq pseudogene 8407 10476 . - . ID=gene-JYJ20_RS09785;Name=JYJ20_RS09785;end_range=10476,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS09785;partial=true;pseudo=true NZ_JAFIRP010000028.1 Protein Homology CDS 8407 10476 . - 0 ID=cds-JYJ20_RS09785;Parent=gene-JYJ20_RS09785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524;end_range=10476,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005687591.1;locus_tag=JYJ20_RS09785;partial=true;product=conjugative transfer ATPase;pseudo=true;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 10493 10852 . + . ID=gene-JYJ20_RS09790;Name=JYJ20_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09790 NZ_JAFIRP010000028.1 Protein Homology CDS 10493 10852 . + 0 ID=cds-WP_021280000.1;Parent=gene-JYJ20_RS09790;Dbxref=GenBank:WP_021280000.1;Name=WP_021280000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248891.1;locus_tag=JYJ20_RS09790;product=hypothetical protein;protein_id=WP_021280000.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 10884 11579 . - . ID=gene-JYJ20_RS09795;Name=JYJ20_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09795 NZ_JAFIRP010000028.1 Protein Homology CDS 10884 11579 . - 0 ID=cds-WP_209026201.1;Parent=gene-JYJ20_RS09795;Dbxref=GenBank:WP_209026201.1;Name=WP_209026201.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248890.1;locus_tag=JYJ20_RS09795;product=TIGR03747 family integrating conjugative element membrane protein;protein_id=WP_209026201.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 11576 11929 . - . ID=gene-JYJ20_RS09800;Name=JYJ20_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09800 NZ_JAFIRP010000028.1 Protein Homology CDS 11576 11929 . - 0 ID=cds-WP_021279998.1;Parent=gene-JYJ20_RS09800;Dbxref=GenBank:WP_021279998.1;Name=WP_021279998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248889.1;locus_tag=JYJ20_RS09800;product=hypothetical protein;protein_id=WP_021279998.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 11922 14126 . - . ID=gene-JYJ20_RS09805;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=JYJ20_RS09805 NZ_JAFIRP010000028.1 Protein Homology CDS 11922 14126 . - 0 ID=cds-WP_021279997.1;Parent=gene-JYJ20_RS09805;Dbxref=GenBank:WP_021279997.1;Name=WP_021279997.1;gbkey=CDS;gene=traD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484601.1;locus_tag=JYJ20_RS09805;product=type IV conjugative transfer system coupling protein TraD;protein_id=WP_021279997.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq pseudogene 14126 14630 . - . ID=gene-JYJ20_RS12480;Name=JYJ20_RS12480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS12480;pseudo=true NZ_JAFIRP010000028.1 Protein Homology CDS 14126 14630 . - 0 ID=cds-JYJ20_RS12480;Parent=gene-JYJ20_RS12480;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022523.7;locus_tag=JYJ20_RS12480;product=integrating conjugative element protein;pseudo=true;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 14633 15418 . - . ID=gene-JYJ20_RS09815;Name=JYJ20_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09815 NZ_JAFIRP010000028.1 Protein Homology CDS 14633 15418 . - 0 ID=cds-WP_021279996.1;Parent=gene-JYJ20_RS09815;Dbxref=GenBank:WP_021279996.1;Name=WP_021279996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340835.1;locus_tag=JYJ20_RS09815;product=lysozyme family protein;protein_id=WP_021279996.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 15397 16170 . - . ID=gene-JYJ20_RS09820;Name=JYJ20_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09820 NZ_JAFIRP010000028.1 Protein Homology CDS 15397 16170 . - 0 ID=cds-WP_031200647.1;Parent=gene-JYJ20_RS09820;Dbxref=GenBank:WP_031200647.1;Name=WP_031200647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248885.1;locus_tag=JYJ20_RS09820;product=TIGR03759 family integrating conjugative element protein;protein_id=WP_031200647.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 16170 16796 . - . ID=gene-JYJ20_RS09825;Name=pilL2;gbkey=Gene;gene=pilL2;gene_biotype=protein_coding;locus_tag=JYJ20_RS09825 NZ_JAFIRP010000028.1 Protein Homology CDS 16170 16796 . - 0 ID=cds-WP_209026202.1;Parent=gene-JYJ20_RS09825;Dbxref=GenBank:WP_209026202.1;Name=WP_209026202.1;gbkey=CDS;gene=pilL2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484597.1;locus_tag=JYJ20_RS09825;product=PFGI-1 class ICE element type IV pilus protein PilL2;protein_id=WP_209026202.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 16892 18460 . - . ID=gene-JYJ20_RS09830;Name=JYJ20_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09830 NZ_JAFIRP010000028.1 Protein Homology CDS 16892 18460 . - 0 ID=cds-WP_245155413.1;Parent=gene-JYJ20_RS09830;Dbxref=GenBank:WP_245155413.1;Name=WP_245155413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484596.1;locus_tag=JYJ20_RS09830;product=PcfJ domain-containing protein;protein_id=WP_245155413.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 18613 18873 . - . ID=gene-JYJ20_RS09835;Name=JYJ20_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09835 NZ_JAFIRP010000028.1 Protein Homology CDS 18613 18873 . - 0 ID=cds-WP_006248347.1;Parent=gene-JYJ20_RS09835;Dbxref=GenBank:WP_006248347.1;Name=WP_006248347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248347.1;locus_tag=JYJ20_RS09835;product=hypothetical protein;protein_id=WP_006248347.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 18986 19348 . - . ID=gene-JYJ20_RS09840;Name=JYJ20_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09840 NZ_JAFIRP010000028.1 Protein Homology CDS 18986 19348 . - 0 ID=cds-WP_006248346.1;Parent=gene-JYJ20_RS09840;Dbxref=GenBank:WP_006248346.1;Name=WP_006248346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248346.1;locus_tag=JYJ20_RS09840;product=hypothetical protein;protein_id=WP_006248346.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 19439 19789 . - . ID=gene-JYJ20_RS09845;Name=JYJ20_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09845 NZ_JAFIRP010000028.1 Protein Homology CDS 19439 19789 . - 0 ID=cds-WP_006248345.1;Parent=gene-JYJ20_RS09845;Dbxref=GenBank:WP_006248345.1;Name=WP_006248345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248345.1;locus_tag=JYJ20_RS09845;product=hypothetical protein;protein_id=WP_006248345.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 19887 20294 . - . ID=gene-JYJ20_RS09850;Name=JYJ20_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09850 NZ_JAFIRP010000028.1 Protein Homology CDS 19887 20294 . - 0 ID=cds-WP_209026204.1;Parent=gene-JYJ20_RS09850;Dbxref=GenBank:WP_209026204.1;Name=WP_209026204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248344.1;locus_tag=JYJ20_RS09850;product=heme utilization protein;protein_id=WP_209026204.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 20318 20965 . - . ID=gene-JYJ20_RS09855;Name=JYJ20_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09855 NZ_JAFIRP010000028.1 Protein Homology CDS 20318 20965 . - 0 ID=cds-WP_209026205.1;Parent=gene-JYJ20_RS09855;Dbxref=GenBank:WP_209026205.1;Name=WP_209026205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484362.1;locus_tag=JYJ20_RS09855;product=DUF3560 domain-containing protein;protein_id=WP_209026205.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq pseudogene 21268 22028 . - . ID=gene-JYJ20_RS09860;Name=JYJ20_RS09860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS09860;partial=true;pseudo=true;start_range=.,21268 NZ_JAFIRP010000028.1 Protein Homology CDS 21268 22028 . - 0 ID=cds-JYJ20_RS09860;Parent=gene-JYJ20_RS09860;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005755516.1;locus_tag=JYJ20_RS09860;partial=true;product=threonine/serine exporter family protein;pseudo=true;start_range=.,21268;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 22194 23297 . + . ID=gene-JYJ20_RS09865;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=JYJ20_RS09865 NZ_JAFIRP010000028.1 Protein Homology CDS 22194 23297 . + 0 ID=cds-WP_005719361.1;Parent=gene-JYJ20_RS09865;Dbxref=GenBank:WP_005719361.1;Name=WP_005719361.1;Ontology_term=GO:0055129,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005719361.1;locus_tag=JYJ20_RS09865;product=glutamate 5-kinase;protein_id=WP_005719361.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 23321 23644 . + . ID=gene-JYJ20_RS09870;Name=JYJ20_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09870 NZ_JAFIRP010000028.1 Protein Homology CDS 23321 23644 . + 0 ID=cds-WP_005719365.1;Parent=gene-JYJ20_RS09870;Dbxref=GenBank:WP_005719365.1;Name=WP_005719365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005755520.1;locus_tag=JYJ20_RS09870;product=hypothetical protein;protein_id=WP_005719365.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 23705 24259 . - . ID=gene-JYJ20_RS09875;Name=bamJ;gbkey=Gene;gene=bamJ;gene_biotype=protein_coding;locus_tag=JYJ20_RS09875 NZ_JAFIRP010000028.1 Protein Homology CDS 23705 24259 . - 0 ID=cds-WP_006248341.1;Parent=gene-JYJ20_RS09875;Dbxref=GenBank:WP_006248341.1;Name=WP_006248341.1;gbkey=CDS;gene=bamJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005724987.1;locus_tag=JYJ20_RS09875;product=BamJ family beta-barrel-assembly machinery protein;protein_id=WP_006248341.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 24284 25171 . - . ID=gene-JYJ20_RS09880;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=JYJ20_RS09880 NZ_JAFIRP010000028.1 Protein Homology CDS 24284 25171 . - 0 ID=cds-WP_209026206.1;Parent=gene-JYJ20_RS09880;Dbxref=GenBank:WP_209026206.1;Name=WP_209026206.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005755522.1;locus_tag=JYJ20_RS09880;product=archaetidylserine decarboxylase;protein_id=WP_209026206.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 25313 26614 . + . ID=gene-JYJ20_RS09885;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=JYJ20_RS09885 NZ_JAFIRP010000028.1 Protein Homology CDS 25313 26614 . + 0 ID=cds-WP_006248340.1;Parent=gene-JYJ20_RS09885;Dbxref=GenBank:WP_006248340.1;Name=WP_006248340.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=S-adenosyl-L-methionine:8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016533607.1;locus_tag=JYJ20_RS09885;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_006248340.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 26611 27774 . + . ID=gene-JYJ20_RS09890;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=JYJ20_RS09890 NZ_JAFIRP010000028.1 Protein Homology CDS 26611 27774 . + 0 ID=cds-WP_044427928.1;Parent=gene-JYJ20_RS09890;Dbxref=GenBank:WP_044427928.1;Name=WP_044427928.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005719374.1;locus_tag=JYJ20_RS09890;product=8-amino-7-oxononanoate synthase;protein_id=WP_044427928.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 27771 28418 . + . ID=gene-JYJ20_RS09895;Name=JYJ20_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09895 NZ_JAFIRP010000028.1 Protein Homology CDS 27771 28418 . + 0 ID=cds-WP_005719377.1;Parent=gene-JYJ20_RS09895;Dbxref=GenBank:WP_005719377.1;Name=WP_005719377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005758126.1;locus_tag=JYJ20_RS09895;product=pimeloyl-ACP methyl esterase BioG family protein;protein_id=WP_005719377.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 28422 29177 . + . ID=gene-JYJ20_RS09900;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=JYJ20_RS09900 NZ_JAFIRP010000028.1 Protein Homology CDS 28422 29177 . + 0 ID=cds-WP_006248339.1;Parent=gene-JYJ20_RS09900;Dbxref=GenBank:WP_006248339.1;Name=WP_006248339.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005755527.1;locus_tag=JYJ20_RS09900;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_006248339.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 29195 29836 . + . ID=gene-JYJ20_RS09905;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=JYJ20_RS09905 NZ_JAFIRP010000028.1 Protein Homology CDS 29195 29836 . + 0 ID=cds-WP_006248338.1;Parent=gene-JYJ20_RS09905;Dbxref=GenBank:WP_006248338.1;Name=WP_006248338.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005724996.1;locus_tag=JYJ20_RS09905;product=dethiobiotin synthase;protein_id=WP_006248338.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq pseudogene 29966 30724 . + . ID=gene-JYJ20_RS09910;Name=JYJ20_RS09910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS09910;pseudo=true NZ_JAFIRP010000028.1 Protein Homology CDS 29966 30724 . + 0 ID=cds-JYJ20_RS09910;Parent=gene-JYJ20_RS09910;Note=internal stop;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014326384.1;locus_tag=JYJ20_RS09910;product=carbonic anhydrase;pseudo=true;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 30828 31817 . - . ID=gene-JYJ20_RS09915;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=JYJ20_RS09915 NZ_JAFIRP010000028.1 Protein Homology CDS 30828 31817 . - 0 ID=cds-WP_005719386.1;Parent=gene-JYJ20_RS09915;Dbxref=GenBank:WP_005719386.1;Name=WP_005719386.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;gene=oppF;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251571.1;locus_tag=JYJ20_RS09915;product=murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF;protein_id=WP_005719386.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 31814 32806 . - . ID=gene-JYJ20_RS09920;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=JYJ20_RS09920 NZ_JAFIRP010000028.1 Protein Homology CDS 31814 32806 . - 0 ID=cds-WP_032847977.1;Parent=gene-JYJ20_RS09920;Dbxref=GenBank:WP_032847977.1;Name=WP_032847977.1;gbkey=CDS;gene=oppD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005719387.1;locus_tag=JYJ20_RS09920;product=ABC transporter ATP-binding protein;protein_id=WP_032847977.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 32824 33255 . - . ID=gene-JYJ20_RS09925;Name=JYJ20_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09925 NZ_JAFIRP010000028.1 Protein Homology CDS 32824 33255 . - 0 ID=cds-WP_006248336.1;Parent=gene-JYJ20_RS09925;Dbxref=GenBank:WP_006248336.1;Name=WP_006248336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248336.1;locus_tag=JYJ20_RS09925;product=STY4534 family ICE replication protein;protein_id=WP_006248336.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq pseudogene 34076 34924 . - . ID=gene-JYJ20_RS12420;Name=JYJ20_RS12420;end_range=34924,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS12420;partial=true;pseudo=true NZ_JAFIRP010000028.1 Protein Homology CDS 34076 34924 . - 0 ID=cds-JYJ20_RS12420;Parent=gene-JYJ20_RS12420;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006265,GO:0003677,GO:0003916;end_range=34924,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340838.1;locus_tag=JYJ20_RS12420;partial=true;product=DNA topoisomerase;pseudo=true;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 34876 35679 . - . ID=gene-JYJ20_RS09935;Name=JYJ20_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09935 NZ_JAFIRP010000028.1 GeneMarkS-2+ CDS 34876 35679 . - 0 ID=cds-WP_021279352.1;Parent=gene-JYJ20_RS09935;Dbxref=GenBank:WP_021279352.1;Name=WP_021279352.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS09935;product=hypothetical protein;protein_id=WP_021279352.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 35683 35928 . - . ID=gene-JYJ20_RS09940;Name=JYJ20_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09940 NZ_JAFIRP010000028.1 GeneMarkS-2+ CDS 35683 35928 . - 0 ID=cds-WP_021279351.1;Parent=gene-JYJ20_RS09940;Dbxref=GenBank:WP_021279351.1;Name=WP_021279351.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS09940;product=hypothetical protein;protein_id=WP_021279351.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 35932 36915 . - . ID=gene-JYJ20_RS09945;Name=JYJ20_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09945 NZ_JAFIRP010000028.1 Protein Homology CDS 35932 36915 . - 0 ID=cds-WP_342365908.1;Parent=gene-JYJ20_RS09945;Dbxref=GenBank:WP_342365908.1;Name=WP_342365908.1;Ontology_term=GO:0006260,GO:0003678,GO:0005524;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF015736.7;locus_tag=JYJ20_RS09945;product=DnaB-like helicase C-terminal domain-containing protein;protein_id=WP_342365908.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 36965 37333 . - . ID=gene-JYJ20_RS12425;Name=JYJ20_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12425 NZ_JAFIRP010000028.1 Protein Homology CDS 36965 37333 . - 0 ID=cds-WP_342365909.1;Parent=gene-JYJ20_RS12425;Dbxref=GenBank:WP_342365909.1;Name=WP_342365909.1;Ontology_term=GO:0006260,GO:0003678,GO:0005524;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF012974.7;locus_tag=JYJ20_RS12425;product=DnaB-like helicase N-terminal domain-containing protein;protein_id=WP_342365909.1;transl_table=11 NZ_JAFIRP010000028.1 RefSeq gene 37348 38130 . - . ID=gene-JYJ20_RS09950;Name=JYJ20_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09950 NZ_JAFIRP010000028.1 Protein Homology CDS 37348 38130 . - 0 ID=cds-WP_405077586.1;Parent=gene-JYJ20_RS09950;Dbxref=GenBank:WP_405077586.1;Name=WP_405077586.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005667768.1;locus_tag=JYJ20_RS09950;product=ParA family protein;protein_id=WP_405077586.1;transl_table=11 ##sequence-region NZ_JAFIRP010000029.1 1 13065 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000029.1 RefSeq region 1 13065 . + . ID=NZ_JAFIRP010000029.1:1..13065;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000029.1 RefSeq gene 687 3074 . + . ID=gene-JYJ20_RS09955;Name=JYJ20_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09955 NZ_JAFIRP010000029.1 Protein Homology CDS 687 3074 . + 0 ID=cds-WP_006250946.1;Parent=gene-JYJ20_RS09955;Dbxref=GenBank:WP_006250946.1;Name=WP_006250946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250946.1;locus_tag=JYJ20_RS09955;product=exo-alpha-sialidase;protein_id=WP_006250946.1;transl_table=11 NZ_JAFIRP010000029.1 RefSeq gene 3241 3777 . - . ID=gene-JYJ20_RS09960;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=JYJ20_RS09960 NZ_JAFIRP010000029.1 Protein Homology CDS 3241 3777 . - 0 ID=cds-WP_006249222.1;Parent=gene-JYJ20_RS09960;Dbxref=GenBank:WP_006249222.1;Name=WP_006249222.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249222.1;locus_tag=JYJ20_RS09960;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_006249222.1;transl_table=11 NZ_JAFIRP010000029.1 RefSeq gene 3816 5165 . - . ID=gene-JYJ20_RS09965;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=JYJ20_RS09965 NZ_JAFIRP010000029.1 Protein Homology CDS 3816 5165 . - 0 ID=cds-WP_006249223.1;Parent=gene-JYJ20_RS09965;Dbxref=GenBank:WP_006249223.1;Name=WP_006249223.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991427.1;locus_tag=JYJ20_RS09965;product=metalloprotease PmbA;protein_id=WP_006249223.1;transl_table=11 NZ_JAFIRP010000029.1 RefSeq gene 5264 5794 . + . ID=gene-JYJ20_RS09970;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=JYJ20_RS09970 NZ_JAFIRP010000029.1 Protein Homology CDS 5264 5794 . + 0 ID=cds-WP_006249224.1;Parent=gene-JYJ20_RS09970;Dbxref=GenBank:WP_006249224.1;Name=WP_006249224.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604242.1;locus_tag=JYJ20_RS09970;product=ribosome biogenesis factor YjgA;protein_id=WP_006249224.1;transl_table=11 NZ_JAFIRP010000029.1 RefSeq gene 5800 6171 . + . ID=gene-JYJ20_RS09975;Name=JYJ20_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09975 NZ_JAFIRP010000029.1 Protein Homology CDS 5800 6171 . + 0 ID=cds-WP_006249225.1;Parent=gene-JYJ20_RS09975;Dbxref=GenBank:WP_006249225.1;Name=WP_006249225.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249225.1;locus_tag=JYJ20_RS09975;product=SirB2 family protein;protein_id=WP_006249225.1;transl_table=11 NZ_JAFIRP010000029.1 RefSeq gene 6184 6897 . + . ID=gene-JYJ20_RS09980;Name=JYJ20_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09980 NZ_JAFIRP010000029.1 Protein Homology CDS 6184 6897 . + 0 ID=cds-WP_209026208.1;Parent=gene-JYJ20_RS09980;Dbxref=GenBank:WP_209026208.1;Name=WP_209026208.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250942.1;locus_tag=JYJ20_RS09980;product=DUF554 domain-containing protein;protein_id=WP_209026208.1;transl_table=11 NZ_JAFIRP010000029.1 RefSeq gene 6900 7463 . + . ID=gene-JYJ20_RS09985;Name=JYJ20_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09985 NZ_JAFIRP010000029.1 Protein Homology CDS 6900 7463 . + 0 ID=cds-WP_031192904.1;Parent=gene-JYJ20_RS09985;Dbxref=GenBank:WP_031192904.1;Name=WP_031192904.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991424.1;locus_tag=JYJ20_RS09985;product=UbiX family flavin prenyltransferase;protein_id=WP_031192904.1;transl_table=11 NZ_JAFIRP010000029.1 RefSeq gene 7526 7966 . + . ID=gene-JYJ20_RS09990;Name=JYJ20_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09990 NZ_JAFIRP010000029.1 Protein Homology CDS 7526 7966 . + 0 ID=cds-WP_006249228.1;Parent=gene-JYJ20_RS09990;Dbxref=GenBank:WP_006249228.1;Name=WP_006249228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250940.1;locus_tag=JYJ20_RS09990;product=PNPOx family protein;protein_id=WP_006249228.1;transl_table=11 NZ_JAFIRP010000029.1 RefSeq gene 7970 8845 . - . ID=gene-JYJ20_RS09995;Name=JYJ20_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS09995 NZ_JAFIRP010000029.1 Protein Homology CDS 7970 8845 . - 0 ID=cds-WP_006249229.1;Parent=gene-JYJ20_RS09995;Dbxref=GenBank:WP_006249229.1;Name=WP_006249229.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249229.1;locus_tag=JYJ20_RS09995;product=helix-turn-helix transcriptional regulator;protein_id=WP_006249229.1;transl_table=11 NZ_JAFIRP010000029.1 RefSeq gene 8951 11026 . + . ID=gene-JYJ20_RS10000;Name=JYJ20_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10000 NZ_JAFIRP010000029.1 Protein Homology CDS 8951 11026 . + 0 ID=cds-WP_134916661.1;Parent=gene-JYJ20_RS10000;Dbxref=GenBank:WP_134916661.1;Name=WP_134916661.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249230.1;locus_tag=JYJ20_RS10000;product=TonB-dependent siderophore receptor;protein_id=WP_134916661.1;transl_table=11 NZ_JAFIRP010000029.1 RefSeq gene 11070 12638 . + . ID=gene-JYJ20_RS10005;Name=JYJ20_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10005 NZ_JAFIRP010000029.1 Protein Homology CDS 11070 12638 . + 0 ID=cds-WP_209026209.1;Parent=gene-JYJ20_RS10005;Dbxref=GenBank:WP_209026209.1;Name=WP_209026209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005758370.1;locus_tag=JYJ20_RS10005;product=alpha/beta hydrolase-fold protein;protein_id=WP_209026209.1;transl_table=11 NZ_JAFIRP010000029.1 RefSeq pseudogene 12815 13012 . - . ID=gene-JYJ20_RS10010;Name=JYJ20_RS10010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS10010;partial=true;pseudo=true;start_range=.,12815 NZ_JAFIRP010000029.1 Protein Homology CDS 12815 13012 . - 0 ID=cds-JYJ20_RS10010;Parent=gene-JYJ20_RS10010;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011625997.1;locus_tag=JYJ20_RS10010;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,12815;transl_table=11 ##sequence-region NZ_JAFIRP010000003.1 1 140177 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000003.1 RefSeq region 1 140177 . + . ID=NZ_JAFIRP010000003.1:1..140177;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000003.1 RefSeq gene 24 1001 . - . ID=gene-JYJ20_RS01180;Name=JYJ20_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01180 NZ_JAFIRP010000003.1 Protein Homology CDS 24 1001 . - 0 ID=cds-WP_006249904.1;Parent=gene-JYJ20_RS01180;Dbxref=GenBank:WP_006249904.1;Name=WP_006249904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252133.1;locus_tag=JYJ20_RS01180;product=putative oxygenase MesX;protein_id=WP_006249904.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 1140 2024 . - . ID=gene-JYJ20_RS01185;Name=JYJ20_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01185 NZ_JAFIRP010000003.1 Protein Homology CDS 1140 2024 . - 0 ID=cds-WP_006249903.1;Parent=gene-JYJ20_RS01185;Dbxref=GenBank:WP_006249903.1;Name=WP_006249903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252132.1;locus_tag=JYJ20_RS01185;product=NAD(+) kinase;protein_id=WP_006249903.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 2034 3068 . - . ID=gene-JYJ20_RS01190;Name=JYJ20_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01190 NZ_JAFIRP010000003.1 Protein Homology CDS 2034 3068 . - 0 ID=cds-WP_006249902.1;Parent=gene-JYJ20_RS01190;Dbxref=GenBank:WP_006249902.1;Name=WP_006249902.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249902.1;locus_tag=JYJ20_RS01190;product=TrmH family RNA methyltransferase;protein_id=WP_006249902.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 3249 4061 . + . ID=gene-JYJ20_RS01195;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=JYJ20_RS01195 NZ_JAFIRP010000003.1 Protein Homology CDS 3249 4061 . + 0 ID=cds-WP_006249901.1;Parent=gene-JYJ20_RS01195;Dbxref=GenBank:WP_006249901.1;Name=WP_006249901.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012621556.1;locus_tag=JYJ20_RS01195;product=inositol-1-monophosphatase;protein_id=WP_006249901.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 4106 5959 . + . ID=gene-JYJ20_RS01200;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=JYJ20_RS01200 NZ_JAFIRP010000003.1 Protein Homology CDS 4106 5959 . + 0 ID=cds-WP_006249900.1;Parent=gene-JYJ20_RS01200;Dbxref=GenBank:WP_006249900.1;Name=WP_006249900.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252130.1;locus_tag=JYJ20_RS01200;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_006249900.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 6145 7731 . + . ID=gene-JYJ20_RS01205;Name=JYJ20_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01205 NZ_JAFIRP010000003.1 Protein Homology CDS 6145 7731 . + 0 ID=cds-WP_015484092.1;Parent=gene-JYJ20_RS01205;Dbxref=GenBank:WP_015484092.1;Name=WP_015484092.1;Ontology_term=GO:0015833,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005667512.1;locus_tag=JYJ20_RS01205;product=carbon starvation CstA family protein;protein_id=WP_015484092.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 7792 8586 . + . ID=gene-JYJ20_RS01210;Name=JYJ20_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01210 NZ_JAFIRP010000003.1 Protein Homology CDS 7792 8586 . + 0 ID=cds-WP_006249568.1;Parent=gene-JYJ20_RS01210;Dbxref=GenBank:WP_006249568.1;Name=WP_006249568.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252128.1;locus_tag=JYJ20_RS01210;product=TatD family hydrolase;protein_id=WP_006249568.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 8577 9344 . - . ID=gene-JYJ20_RS01215;Name=JYJ20_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01215 NZ_JAFIRP010000003.1 Protein Homology CDS 8577 9344 . - 0 ID=cds-WP_006249569.1;Parent=gene-JYJ20_RS01215;Dbxref=GenBank:WP_006249569.1;Name=WP_006249569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249569.1;locus_tag=JYJ20_RS01215;product=BPL-N domain-containing protein;protein_id=WP_006249569.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 9425 9916 . + . ID=gene-JYJ20_RS01220;Name=JYJ20_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01220 NZ_JAFIRP010000003.1 Protein Homology CDS 9425 9916 . + 0 ID=cds-WP_006249570.1;Parent=gene-JYJ20_RS01220;Dbxref=GenBank:WP_006249570.1;Name=WP_006249570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249570.1;locus_tag=JYJ20_RS01220;product=biotin transporter BioY;protein_id=WP_006249570.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 10191 11540 . + . ID=gene-JYJ20_RS01225;Name=JYJ20_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01225 NZ_JAFIRP010000003.1 Protein Homology CDS 10191 11540 . + 0 ID=cds-WP_006249572.1;Parent=gene-JYJ20_RS01225;Dbxref=GenBank:WP_006249572.1;Name=WP_006249572.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249572.1;locus_tag=JYJ20_RS01225;product=MFS transporter;protein_id=WP_006249572.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 11707 13638 . + . ID=gene-JYJ20_RS01230;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=JYJ20_RS01230 NZ_JAFIRP010000003.1 Protein Homology CDS 11707 13638 . + 0 ID=cds-WP_006249573.1;Parent=gene-JYJ20_RS01230;Dbxref=GenBank:WP_006249573.1;Name=WP_006249573.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011200229.1;locus_tag=JYJ20_RS01230;product=threonine--tRNA ligase;protein_id=WP_006249573.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 13713 14978 . - . ID=gene-JYJ20_RS01235;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=JYJ20_RS01235 NZ_JAFIRP010000003.1 Protein Homology CDS 13713 14978 . - 0 ID=cds-WP_006249574.1;Parent=gene-JYJ20_RS01235;Dbxref=GenBank:WP_006249574.1;Name=WP_006249574.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651448.1;locus_tag=JYJ20_RS01235;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_006249574.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 14975 15658 . - . ID=gene-JYJ20_RS01240;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=JYJ20_RS01240 NZ_JAFIRP010000003.1 Protein Homology CDS 14975 15658 . - 0 ID=cds-WP_006249575.1;Parent=gene-JYJ20_RS01240;Dbxref=GenBank:WP_006249575.1;Name=WP_006249575.1;Ontology_term=GO:0042953,GO:0005524,GO:0043190;gbkey=CDS;gene=lolD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252119.1;locus_tag=JYJ20_RS01240;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_006249575.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 15675 16847 . - . ID=gene-JYJ20_RS01245;Name=JYJ20_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01245 NZ_JAFIRP010000003.1 Protein Homology CDS 15675 16847 . - 0 ID=cds-WP_006249576.1;Parent=gene-JYJ20_RS01245;Dbxref=GenBank:WP_006249576.1;Name=WP_006249576.1;Ontology_term=GO:0042953,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609574.1;locus_tag=JYJ20_RS01245;product=lipoprotein-releasing ABC transporter permease subunit;protein_id=WP_006249576.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 16945 17892 . - . ID=gene-JYJ20_RS01250;Name=JYJ20_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01250 NZ_JAFIRP010000003.1 Protein Homology CDS 16945 17892 . - 0 ID=cds-WP_006249577.1;Parent=gene-JYJ20_RS01250;Dbxref=GenBank:WP_006249577.1;Name=WP_006249577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249577.1;locus_tag=JYJ20_RS01250;product=2-hydroxyacid dehydrogenase;protein_id=WP_006249577.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 18113 18967 . - . ID=gene-JYJ20_RS01255;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=JYJ20_RS01255 NZ_JAFIRP010000003.1 Protein Homology CDS 18113 18967 . - 0 ID=cds-WP_006249578.1;Parent=gene-JYJ20_RS01255;Dbxref=GenBank:WP_006249578.1;Name=WP_006249578.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012073169.1;locus_tag=JYJ20_RS01255;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_006249578.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 19057 19923 . - . ID=gene-JYJ20_RS01260;Name=JYJ20_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01260 NZ_JAFIRP010000003.1 Protein Homology CDS 19057 19923 . - 0 ID=cds-WP_006249579.1;Parent=gene-JYJ20_RS01260;Dbxref=GenBank:WP_006249579.1;Name=WP_006249579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674537.1;locus_tag=JYJ20_RS01260;product=SirB1 family protein;protein_id=WP_006249579.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 19932 20798 . - . ID=gene-JYJ20_RS01265;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=JYJ20_RS01265 NZ_JAFIRP010000003.1 Protein Homology CDS 19932 20798 . - 0 ID=cds-WP_006249580.1;Parent=gene-JYJ20_RS01265;Dbxref=GenBank:WP_006249580.1;Name=WP_006249580.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249580.1;locus_tag=JYJ20_RS01265;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_006249580.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 20798 21400 . - . ID=gene-JYJ20_RS01270;Name=JYJ20_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01270 NZ_JAFIRP010000003.1 Protein Homology CDS 20798 21400 . - 0 ID=cds-WP_006249581.1;Parent=gene-JYJ20_RS01270;Dbxref=GenBank:WP_006249581.1;Name=WP_006249581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249581.1;locus_tag=JYJ20_RS01270;product=hypothetical protein;protein_id=WP_006249581.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 21512 22594 . - . ID=gene-JYJ20_RS01275;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=JYJ20_RS01275 NZ_JAFIRP010000003.1 Protein Homology CDS 21512 22594 . - 0 ID=cds-WP_006249582.1;Parent=gene-JYJ20_RS01275;Dbxref=GenBank:WP_006249582.1;Name=WP_006249582.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005713004.1;locus_tag=JYJ20_RS01275;product=peptide chain release factor 1;protein_id=WP_006249582.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 22691 23275 . - . ID=gene-JYJ20_RS01280;Name=JYJ20_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01280 NZ_JAFIRP010000003.1 Protein Homology CDS 22691 23275 . - 0 ID=cds-WP_006249583.1;Parent=gene-JYJ20_RS01280;Dbxref=GenBank:WP_006249583.1;Name=WP_006249583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249583.1;locus_tag=JYJ20_RS01280;product=anthranilate synthase component II;protein_id=WP_006249583.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 23338 24957 . - . ID=gene-JYJ20_RS01285;Name=JYJ20_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01285 NZ_JAFIRP010000003.1 Protein Homology CDS 23338 24957 . - 0 ID=cds-WP_006249584.1;Parent=gene-JYJ20_RS01285;Dbxref=GenBank:WP_006249584.1;Name=WP_006249584.1;Ontology_term=GO:0006310;gbkey=CDS;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249584.1;locus_tag=JYJ20_RS01285;product=DNA recombination protein RmuC;protein_id=WP_006249584.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 25055 26029 . + . ID=gene-JYJ20_RS01290;Name=JYJ20_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01290 NZ_JAFIRP010000003.1 Protein Homology CDS 25055 26029 . + 0 ID=cds-WP_006253750.1;Parent=gene-JYJ20_RS01290;Dbxref=GenBank:WP_006253750.1;Name=WP_006253750.1;Ontology_term=GO:0009058;gbkey=CDS;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612571.1;locus_tag=JYJ20_RS01290;product=aminodeoxychorismate synthase component I;protein_id=WP_006253750.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 26007 26627 . + . ID=gene-JYJ20_RS01295;Name=JYJ20_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01295 NZ_JAFIRP010000003.1 Protein Homology CDS 26007 26627 . + 0 ID=cds-WP_006249586.1;Parent=gene-JYJ20_RS01295;Dbxref=GenBank:WP_006249586.1;Name=WP_006249586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249586.1;locus_tag=JYJ20_RS01295;product=aminotransferase class IV family protein;protein_id=WP_006249586.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 26728 27834 . + . ID=gene-JYJ20_RS01300;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=JYJ20_RS01300 NZ_JAFIRP010000003.1 Protein Homology CDS 26728 27834 . + 0 ID=cds-WP_006249587.1;Parent=gene-JYJ20_RS01300;Dbxref=GenBank:WP_006249587.1;Name=WP_006249587.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249587.1;locus_tag=JYJ20_RS01300;product=recombinase RecA;protein_id=WP_006249587.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 27893 28369 . + . ID=gene-JYJ20_RS01305;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=JYJ20_RS01305 NZ_JAFIRP010000003.1 Protein Homology CDS 27893 28369 . + 0 ID=cds-WP_006249588.1;Parent=gene-JYJ20_RS01305;Dbxref=GenBank:WP_006249588.1;Name=WP_006249588.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249588.1;locus_tag=JYJ20_RS01305;product=recombination regulator RecX;protein_id=WP_006249588.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 28362 28673 . + . ID=gene-JYJ20_RS01310;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=JYJ20_RS01310 NZ_JAFIRP010000003.1 Protein Homology CDS 28362 28673 . + 0 ID=cds-WP_006252109.1;Parent=gene-JYJ20_RS01310;Dbxref=GenBank:WP_006252109.1;Name=WP_006252109.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252109.1;locus_tag=JYJ20_RS01310;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_006252109.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 28683 29219 . + . ID=gene-JYJ20_RS01315;Name=JYJ20_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01315 NZ_JAFIRP010000003.1 Protein Homology CDS 28683 29219 . + 0 ID=cds-WP_006249590.1;Parent=gene-JYJ20_RS01315;Dbxref=GenBank:WP_006249590.1;Name=WP_006249590.1;Ontology_term=GO:0006265,GO:0003677,GO:0003917;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249590.1;locus_tag=JYJ20_RS01315;product=DNA topoisomerase family protein;protein_id=WP_006249590.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 29212 29766 . + . ID=gene-JYJ20_RS01320;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=JYJ20_RS01320 NZ_JAFIRP010000003.1 Protein Homology CDS 29212 29766 . + 0 ID=cds-WP_006249591.1;Parent=gene-JYJ20_RS01320;Dbxref=GenBank:WP_006249591.1;Name=WP_006249591.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249591.1;locus_tag=JYJ20_RS01320;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_006249591.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 29773 30597 . + . ID=gene-JYJ20_RS01325;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=JYJ20_RS01325 NZ_JAFIRP010000003.1 Protein Homology CDS 29773 30597 . + 0 ID=cds-WP_006249592.1;Parent=gene-JYJ20_RS01325;Dbxref=GenBank:WP_006249592.1;Name=WP_006249592.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615478.1;locus_tag=JYJ20_RS01325;product=shikimate dehydrogenase;protein_id=WP_006249592.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 30764 30840 . + . ID=gene-JYJ20_RS01330;Name=JYJ20_RS01330;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS01330 NZ_JAFIRP010000003.1 tRNAscan-SE tRNA 30764 30840 . + . ID=rna-JYJ20_RS01330;Parent=gene-JYJ20_RS01330;anticodon=(pos:30798..30800);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS01330;product=tRNA-Met NZ_JAFIRP010000003.1 tRNAscan-SE exon 30764 30840 . + . ID=exon-JYJ20_RS01330-1;Parent=rna-JYJ20_RS01330;anticodon=(pos:30798..30800);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS01330;product=tRNA-Met NZ_JAFIRP010000003.1 RefSeq gene 30843 30927 . + . ID=gene-JYJ20_RS01335;Name=JYJ20_RS01335;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS01335 NZ_JAFIRP010000003.1 tRNAscan-SE tRNA 30843 30927 . + . ID=rna-JYJ20_RS01335;Parent=gene-JYJ20_RS01335;anticodon=(pos:30877..30879);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS01335;product=tRNA-Leu NZ_JAFIRP010000003.1 tRNAscan-SE exon 30843 30927 . + . ID=exon-JYJ20_RS01335-1;Parent=rna-JYJ20_RS01335;anticodon=(pos:30877..30879);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS01335;product=tRNA-Leu NZ_JAFIRP010000003.1 RefSeq gene 30953 31027 . + . ID=gene-JYJ20_RS01340;Name=JYJ20_RS01340;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS01340 NZ_JAFIRP010000003.1 tRNAscan-SE tRNA 30953 31027 . + . ID=rna-JYJ20_RS01340;Parent=gene-JYJ20_RS01340;anticodon=(pos:30985..30987);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS01340;product=tRNA-Gln NZ_JAFIRP010000003.1 tRNAscan-SE exon 30953 31027 . + . ID=exon-JYJ20_RS01340-1;Parent=rna-JYJ20_RS01340;anticodon=(pos:30985..30987);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS01340;product=tRNA-Gln NZ_JAFIRP010000003.1 RefSeq gene 31082 31156 . + . ID=gene-JYJ20_RS01345;Name=JYJ20_RS01345;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS01345 NZ_JAFIRP010000003.1 tRNAscan-SE tRNA 31082 31156 . + . ID=rna-JYJ20_RS01345;Parent=gene-JYJ20_RS01345;anticodon=(pos:31114..31116);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS01345;product=tRNA-Gln NZ_JAFIRP010000003.1 tRNAscan-SE exon 31082 31156 . + . ID=exon-JYJ20_RS01345-1;Parent=rna-JYJ20_RS01345;anticodon=(pos:31114..31116);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS01345;product=tRNA-Gln NZ_JAFIRP010000003.1 RefSeq gene 31303 33501 . - . ID=gene-JYJ20_RS01350;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=JYJ20_RS01350 NZ_JAFIRP010000003.1 Protein Homology CDS 31303 33501 . - 0 ID=cds-WP_006249593.1;Parent=gene-JYJ20_RS01350;Dbxref=GenBank:WP_006249593.1;Name=WP_006249593.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608557.1;locus_tag=JYJ20_RS01350;product=DNA helicase II;protein_id=WP_006249593.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 33546 34442 . - . ID=gene-JYJ20_RS01355;Name=JYJ20_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01355 NZ_JAFIRP010000003.1 Protein Homology CDS 33546 34442 . - 0 ID=cds-WP_006249594.1;Parent=gene-JYJ20_RS01355;Dbxref=GenBank:WP_006249594.1;Name=WP_006249594.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252105.1;locus_tag=JYJ20_RS01355;product=TIGR01777 family oxidoreductase;protein_id=WP_006249594.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 34492 34953 . - . ID=gene-JYJ20_RS01360;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=JYJ20_RS01360 NZ_JAFIRP010000003.1 Protein Homology CDS 34492 34953 . - 0 ID=cds-WP_006249595.1;Parent=gene-JYJ20_RS01360;Dbxref=GenBank:WP_006249595.1;Name=WP_006249595.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005713376.1;locus_tag=JYJ20_RS01360;product=transcriptional regulator ArgR;protein_id=WP_006249595.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 35149 36117 . + . ID=gene-JYJ20_RS01365;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=JYJ20_RS01365 NZ_JAFIRP010000003.1 Protein Homology CDS 35149 36117 . + 0 ID=cds-WP_006249596.1;Parent=gene-JYJ20_RS01365;Dbxref=GenBank:WP_006249596.1;Name=WP_006249596.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249596.1;locus_tag=JYJ20_RS01365;product=malate dehydrogenase;protein_id=WP_006249596.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 36194 36490 . + . ID=gene-JYJ20_RS01370;Name=JYJ20_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01370 NZ_JAFIRP010000003.1 Protein Homology CDS 36194 36490 . + 0 ID=cds-WP_006249597.1;Parent=gene-JYJ20_RS01370;Dbxref=GenBank:WP_006249597.1;Name=WP_006249597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249597.1;locus_tag=JYJ20_RS01370;product=hypothetical protein;protein_id=WP_006249597.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 36538 36714 . - . ID=gene-JYJ20_RS01375;Name=JYJ20_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01375 NZ_JAFIRP010000003.1 Protein Homology CDS 36538 36714 . - 0 ID=cds-WP_006252102.1;Parent=gene-JYJ20_RS01375;Dbxref=GenBank:WP_006252102.1;Name=WP_006252102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252102.1;locus_tag=JYJ20_RS01375;product=DUF5363 domain-containing protein;protein_id=WP_006252102.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 36799 37290 . - . ID=gene-JYJ20_RS01380;Name=JYJ20_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01380 NZ_JAFIRP010000003.1 Protein Homology CDS 36799 37290 . - 0 ID=cds-WP_006249599.1;Parent=gene-JYJ20_RS01380;Dbxref=GenBank:WP_006249599.1;Name=WP_006249599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651339.1;locus_tag=JYJ20_RS01380;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_006249599.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 37306 38169 . - . ID=gene-JYJ20_RS01385;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=JYJ20_RS01385 NZ_JAFIRP010000003.1 Protein Homology CDS 37306 38169 . - 0 ID=cds-WP_006249600.1;Parent=gene-JYJ20_RS01385;Dbxref=GenBank:WP_006249600.1;Name=WP_006249600.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252100.1;locus_tag=JYJ20_RS01385;product=phosphoserine phosphatase SerB;protein_id=WP_006249600.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 38255 38914 . + . ID=gene-JYJ20_RS01390;Name=JYJ20_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01390 NZ_JAFIRP010000003.1 Protein Homology CDS 38255 38914 . + 0 ID=cds-WP_006249601.1;Parent=gene-JYJ20_RS01390;Dbxref=GenBank:WP_006249601.1;Name=WP_006249601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875525.1;locus_tag=JYJ20_RS01390;product=YtjB family periplasmic protein;protein_id=WP_006249601.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 39024 39242 . + . ID=gene-JYJ20_RS01395;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=JYJ20_RS01395 NZ_JAFIRP010000003.1 Protein Homology CDS 39024 39242 . + 0 ID=cds-WP_005705342.1;Parent=gene-JYJ20_RS01395;Dbxref=GenBank:WP_005705342.1;Name=WP_005705342.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=JYJ20_RS01395;product=translation initiation factor IF-1;protein_id=WP_005705342.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 39313 40506 . - . ID=gene-JYJ20_RS01400;Name=JYJ20_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01400 NZ_JAFIRP010000003.1 Protein Homology CDS 39313 40506 . - 0 ID=cds-WP_006249603.1;Parent=gene-JYJ20_RS01400;Dbxref=GenBank:WP_006249603.1;Name=WP_006249603.1;Ontology_term=GO:0016628,GO:0050660,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252099.1;locus_tag=JYJ20_RS01400;product=BaiN/RdsA family NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_006249603.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 40506 40874 . - . ID=gene-JYJ20_RS01405;Name=JYJ20_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01405 NZ_JAFIRP010000003.1 Protein Homology CDS 40506 40874 . - 0 ID=cds-WP_006252985.1;Parent=gene-JYJ20_RS01405;Dbxref=GenBank:WP_006252985.1;Name=WP_006252985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252985.1;locus_tag=JYJ20_RS01405;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_006252985.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 40994 42289 . - . ID=gene-JYJ20_RS01410;Name=JYJ20_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01410 NZ_JAFIRP010000003.1 Protein Homology CDS 40994 42289 . - 0 ID=cds-WP_006253751.1;Parent=gene-JYJ20_RS01410;Dbxref=GenBank:WP_006253751.1;Name=WP_006253751.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617710.1;locus_tag=JYJ20_RS01410;product=NCS2 family permease;protein_id=WP_006253751.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 42386 43372 . - . ID=gene-JYJ20_RS01415;Name=JYJ20_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01415 NZ_JAFIRP010000003.1 Protein Homology CDS 42386 43372 . - 0 ID=cds-WP_006250416.1;Parent=gene-JYJ20_RS01415;Dbxref=GenBank:WP_006250416.1;Name=WP_006250416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252096.1;locus_tag=JYJ20_RS01415;product=oxidoreductase;protein_id=WP_006250416.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 43613 43888 . + . ID=gene-JYJ20_RS01420;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=JYJ20_RS01420 NZ_JAFIRP010000003.1 Protein Homology CDS 43613 43888 . + 0 ID=cds-WP_006250415.1;Parent=gene-JYJ20_RS01420;Dbxref=GenBank:WP_006250415.1;Name=WP_006250415.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252095.1;locus_tag=JYJ20_RS01420;product=LexA regulated protein;protein_id=WP_006250415.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 43894 44418 . + . ID=gene-JYJ20_RS01425;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=JYJ20_RS01425 NZ_JAFIRP010000003.1 Protein Homology CDS 43894 44418 . + 0 ID=cds-WP_006250414.1;Parent=gene-JYJ20_RS01425;Dbxref=GenBank:WP_006250414.1;Name=WP_006250414.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006717621.1;locus_tag=JYJ20_RS01425;product=flavodoxin FldA;protein_id=WP_006250414.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 44454 44894 . + . ID=gene-JYJ20_RS01430;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=JYJ20_RS01430 NZ_JAFIRP010000003.1 Protein Homology CDS 44454 44894 . + 0 ID=cds-WP_006250413.1;Parent=gene-JYJ20_RS01430;Dbxref=GenBank:WP_006250413.1;Name=WP_006250413.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250413.1;locus_tag=JYJ20_RS01430;product=ferric iron uptake transcriptional regulator;protein_id=WP_006250413.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 44977 47643 . + . ID=gene-JYJ20_RS01435;Name=JYJ20_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01435 NZ_JAFIRP010000003.1 Protein Homology CDS 44977 47643 . + 0 ID=cds-WP_006250412.1;Parent=gene-JYJ20_RS01435;Dbxref=GenBank:WP_006250412.1;Name=WP_006250412.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252094.1;locus_tag=JYJ20_RS01435;product=MlaD family protein;protein_id=WP_006250412.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 47661 48170 . + . ID=gene-JYJ20_RS01440;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=JYJ20_RS01440 NZ_JAFIRP010000003.1 Protein Homology CDS 47661 48170 . + 0 ID=cds-WP_006250411.1;Parent=gene-JYJ20_RS01440;Dbxref=GenBank:WP_006250411.1;Name=WP_006250411.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005706864.1;locus_tag=JYJ20_RS01440;product=S-ribosylhomocysteine lyase;protein_id=WP_006250411.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 48239 50086 . + . ID=gene-JYJ20_RS01445;Name=JYJ20_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01445 NZ_JAFIRP010000003.1 Protein Homology CDS 48239 50086 . + 0 ID=cds-WP_006250410.1;Parent=gene-JYJ20_RS01445;Dbxref=GenBank:WP_006250410.1;Name=WP_006250410.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250410.1;locus_tag=JYJ20_RS01445;product=ABC transporter ATP-binding protein;protein_id=WP_006250410.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 50273 51622 . + . ID=gene-JYJ20_RS01450;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=JYJ20_RS01450 NZ_JAFIRP010000003.1 Protein Homology CDS 50273 51622 . + 0 ID=cds-WP_015484087.1;Parent=gene-JYJ20_RS01450;Dbxref=GenBank:WP_015484087.1;Name=WP_015484087.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005609583.1;locus_tag=JYJ20_RS01450;product=chromosomal replication initiator protein DnaA;protein_id=WP_015484087.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 51641 52744 . + . ID=gene-JYJ20_RS01455;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=JYJ20_RS01455 NZ_JAFIRP010000003.1 Protein Homology CDS 51641 52744 . + 0 ID=cds-WP_006250407.1;Parent=gene-JYJ20_RS01455;Dbxref=GenBank:WP_006250407.1;Name=WP_006250407.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651439.1;locus_tag=JYJ20_RS01455;product=DNA polymerase III subunit beta;protein_id=WP_006250407.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 52807 53427 . - . ID=gene-JYJ20_RS01460;Name=JYJ20_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01460 NZ_JAFIRP010000003.1 Protein Homology CDS 52807 53427 . - 0 ID=cds-WP_006250406.1;Parent=gene-JYJ20_RS01460;Dbxref=GenBank:WP_006250406.1;Name=WP_006250406.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601670.1;locus_tag=JYJ20_RS01460;product=YfgM family protein;protein_id=WP_006250406.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 53437 54708 . - . ID=gene-JYJ20_RS01465;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=JYJ20_RS01465 NZ_JAFIRP010000003.1 Protein Homology CDS 53437 54708 . - 0 ID=cds-WP_006253752.1;Parent=gene-JYJ20_RS01465;Dbxref=GenBank:WP_006253752.1;Name=WP_006253752.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617650.1;locus_tag=JYJ20_RS01465;product=histidine--tRNA ligase;protein_id=WP_006253752.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 54714 55826 . - . ID=gene-JYJ20_RS01470;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=JYJ20_RS01470 NZ_JAFIRP010000003.1 Protein Homology CDS 54714 55826 . - 0 ID=cds-WP_006250404.1;Parent=gene-JYJ20_RS01470;Dbxref=GenBank:WP_006250404.1;Name=WP_006250404.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250404.1;locus_tag=JYJ20_RS01470;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_006250404.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 55927 56925 . - . ID=gene-JYJ20_RS01475;Name=JYJ20_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01475 NZ_JAFIRP010000003.1 Protein Homology CDS 55927 56925 . - 0 ID=cds-WP_006250403.1;Parent=gene-JYJ20_RS01475;Dbxref=GenBank:WP_006250403.1;Name=WP_006250403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250403.1;locus_tag=JYJ20_RS01475;product=RodZ domain-containing protein;protein_id=WP_006250403.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 57093 58472 . - . ID=gene-JYJ20_RS01480;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=JYJ20_RS01480 NZ_JAFIRP010000003.1 Protein Homology CDS 57093 58472 . - 0 ID=cds-WP_006250402.1;Parent=gene-JYJ20_RS01480;Dbxref=GenBank:WP_006250402.1;Name=WP_006250402.1;Ontology_term=GO:0006526,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252085.1;locus_tag=JYJ20_RS01480;product=argininosuccinate lyase;protein_id=WP_006250402.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 58589 59752 . - . ID=gene-JYJ20_RS01485;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=JYJ20_RS01485 NZ_JAFIRP010000003.1 Protein Homology CDS 58589 59752 . - 0 ID=cds-WP_006250400.1;Parent=gene-JYJ20_RS01485;Dbxref=GenBank:WP_006250400.1;Name=WP_006250400.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250400.1;locus_tag=JYJ20_RS01485;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_006250400.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 59863 60174 . - . ID=gene-JYJ20_RS01490;Name=JYJ20_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01490 NZ_JAFIRP010000003.1 Protein Homology CDS 59863 60174 . - 0 ID=cds-WP_006250399.1;Parent=gene-JYJ20_RS01490;Dbxref=GenBank:WP_006250399.1;Name=WP_006250399.1;Ontology_term=GO:0000166,GO:0016779,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleotidyltransferase activity|0016779||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250399.1;locus_tag=JYJ20_RS01490;product=nucleotidyltransferase domain-containing protein;protein_id=WP_006250399.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 60156 60572 . - . ID=gene-JYJ20_RS01495;Name=JYJ20_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01495 NZ_JAFIRP010000003.1 Protein Homology CDS 60156 60572 . - 0 ID=cds-WP_006250398.1;Parent=gene-JYJ20_RS01495;Dbxref=GenBank:WP_006250398.1;Name=WP_006250398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250398.1;locus_tag=JYJ20_RS01495;product=nucleotidyltransferase substrate binding protein;protein_id=WP_006250398.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 60574 60819 . - . ID=gene-JYJ20_RS01500;Name=nqrM;gbkey=Gene;gene=nqrM;gene_biotype=protein_coding;locus_tag=JYJ20_RS01500 NZ_JAFIRP010000003.1 Protein Homology CDS 60574 60819 . - 0 ID=cds-WP_006250397.1;Parent=gene-JYJ20_RS01500;Dbxref=GenBank:WP_006250397.1;Name=WP_006250397.1;gbkey=CDS;gene=nqrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250397.1;locus_tag=JYJ20_RS01500;product=(Na+)-NQR maturation NqrM;protein_id=WP_006250397.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 60832 61866 . - . ID=gene-JYJ20_RS01505;Name=JYJ20_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01505 NZ_JAFIRP010000003.1 Protein Homology CDS 60832 61866 . - 0 ID=cds-WP_006250396.1;Parent=gene-JYJ20_RS01505;Dbxref=GenBank:WP_006250396.1;Name=WP_006250396.1;Ontology_term=GO:0017013,GO:0016740,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transferase activity|0016740||IEA,metal ion binding|0046872||IEA;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250396.1;locus_tag=JYJ20_RS01505;product=FAD:protein FMN transferase;protein_id=WP_006250396.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 61915 62208 . - . ID=gene-JYJ20_RS01510;Name=JYJ20_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01510 NZ_JAFIRP010000003.1 Protein Homology CDS 61915 62208 . - 0 ID=cds-WP_006250395.1;Parent=gene-JYJ20_RS01510;Dbxref=GenBank:WP_006250395.1;Name=WP_006250395.1;Ontology_term=GO:0016779,GO:0046872;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250395.1;locus_tag=JYJ20_RS01510;product=nucleotidyltransferase family protein;protein_id=WP_006250395.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 62201 62635 . - . ID=gene-JYJ20_RS01515;Name=JYJ20_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01515 NZ_JAFIRP010000003.1 Protein Homology CDS 62201 62635 . - 0 ID=cds-WP_006250394.1;Parent=gene-JYJ20_RS01515;Dbxref=GenBank:WP_006250394.1;Name=WP_006250394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250394.1;locus_tag=JYJ20_RS01515;product=nucleotidyltransferase substrate binding protein;protein_id=WP_006250394.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 62747 63976 . - . ID=gene-JYJ20_RS01520;Name=nqrF;gbkey=Gene;gene=nqrF;gene_biotype=protein_coding;locus_tag=JYJ20_RS01520 NZ_JAFIRP010000003.1 Protein Homology CDS 62747 63976 . - 0 ID=cds-WP_006250393.1;Parent=gene-JYJ20_RS01520;Dbxref=GenBank:WP_006250393.1;Name=WP_006250393.1;Ontology_term=GO:0006814,GO:0016655,GO:0051537,GO:0016020;gbkey=CDS;gene=nqrF;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651191.1;locus_tag=JYJ20_RS01520;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;protein_id=WP_006250393.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 63987 64583 . - . ID=gene-JYJ20_RS01525;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=JYJ20_RS01525 NZ_JAFIRP010000003.1 Protein Homology CDS 63987 64583 . - 0 ID=cds-WP_006250392.1;Parent=gene-JYJ20_RS01525;Dbxref=GenBank:WP_006250392.1;Name=WP_006250392.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrE;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005529392.1;locus_tag=JYJ20_RS01525;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=WP_006250392.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 64585 65211 . - . ID=gene-JYJ20_RS01530;Name=JYJ20_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01530 NZ_JAFIRP010000003.1 Protein Homology CDS 64585 65211 . - 0 ID=cds-WP_006250391.1;Parent=gene-JYJ20_RS01530;Dbxref=GenBank:WP_006250391.1;Name=WP_006250391.1;Ontology_term=GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005717817.1;locus_tag=JYJ20_RS01530;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;protein_id=WP_006250391.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 65211 65984 . - . ID=gene-JYJ20_RS01535;Name=JYJ20_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01535 NZ_JAFIRP010000003.1 Protein Homology CDS 65211 65984 . - 0 ID=cds-WP_006250390.1;Parent=gene-JYJ20_RS01535;Dbxref=GenBank:WP_006250390.1;Name=WP_006250390.1;Ontology_term=GO:0006814,GO:0010181,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651192.1;locus_tag=JYJ20_RS01535;product=Na(+)-translocating NADH-quinone reductase subunit C;protein_id=WP_006250390.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 65977 67212 . - . ID=gene-JYJ20_RS01540;Name=JYJ20_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01540 NZ_JAFIRP010000003.1 Protein Homology CDS 65977 67212 . - 0 ID=cds-WP_006250389.1;Parent=gene-JYJ20_RS01540;Dbxref=GenBank:WP_006250389.1;Name=WP_006250389.1;Ontology_term=GO:0022904,GO:0055085,GO:0010181,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=respiratory electron transport chain|0022904||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250389.1;locus_tag=JYJ20_RS01540;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=WP_006250389.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 67215 68573 . - . ID=gene-JYJ20_RS01545;Name=JYJ20_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01545 NZ_JAFIRP010000003.1 Protein Homology CDS 67215 68573 . - 0 ID=cds-WP_006250388.1;Parent=gene-JYJ20_RS01545;Dbxref=GenBank:WP_006250388.1;Name=WP_006250388.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595863.1;locus_tag=JYJ20_RS01545;product=Na(+)-translocating NADH-quinone reductase subunit A;protein_id=WP_006250388.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 69020 69616 . + . ID=gene-JYJ20_RS01550;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=JYJ20_RS01550 NZ_JAFIRP010000003.1 Protein Homology CDS 69020 69616 . + 0 ID=cds-WP_006250387.1;Parent=gene-JYJ20_RS01550;Dbxref=GenBank:WP_006250387.1;Name=WP_006250387.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250877.1;locus_tag=JYJ20_RS01550;product=Fe-S biogenesis protein NfuA;protein_id=WP_006250387.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 69784 71421 . - . ID=gene-JYJ20_RS01555;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=JYJ20_RS01555 NZ_JAFIRP010000003.1 Protein Homology CDS 69784 71421 . - 0 ID=cds-WP_006250386.1;Parent=gene-JYJ20_RS01555;Dbxref=GenBank:WP_006250386.1;Name=WP_006250386.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595836.1;locus_tag=JYJ20_RS01555;product=glutamine hydrolyzing CTP synthase;protein_id=WP_006250386.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 71685 72734 . + . ID=gene-JYJ20_RS01560;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=JYJ20_RS01560 NZ_JAFIRP010000003.1 Protein Homology CDS 71685 72734 . + 0 ID=cds-WP_006250385.1;Parent=gene-JYJ20_RS01560;Dbxref=GenBank:WP_006250385.1;Name=WP_006250385.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651213.1;locus_tag=JYJ20_RS01560;product=L-asparaginase 2;protein_id=WP_006250385.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 72808 73452 . - . ID=gene-JYJ20_RS01565;Name=JYJ20_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01565 NZ_JAFIRP010000003.1 Protein Homology CDS 72808 73452 . - 0 ID=cds-WP_006250384.1;Parent=gene-JYJ20_RS01565;Dbxref=GenBank:WP_006250384.1;Name=WP_006250384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250384.1;locus_tag=JYJ20_RS01565;product=hypothetical protein;protein_id=WP_006250384.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 73453 74436 . - . ID=gene-JYJ20_RS01570;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=JYJ20_RS01570 NZ_JAFIRP010000003.1 Protein Homology CDS 73453 74436 . - 0 ID=cds-WP_006250874.1;Parent=gene-JYJ20_RS01570;Dbxref=GenBank:WP_006250874.1;Name=WP_006250874.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651215.1;locus_tag=JYJ20_RS01570;product=HTH-type transcriptional regulator CysB;protein_id=WP_006250874.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 74433 75116 . - . ID=gene-JYJ20_RS01575;Name=yjjG;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=JYJ20_RS01575 NZ_JAFIRP010000003.1 Protein Homology CDS 74433 75116 . - 0 ID=cds-WP_006250382.1;Parent=gene-JYJ20_RS01575;Dbxref=GenBank:WP_006250382.1;Name=WP_006250382.1;Ontology_term=GO:0008253;gbkey=CDS;gene=yjjG;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250873.1;locus_tag=JYJ20_RS01575;product=pyrimidine 5'-nucleotidase;protein_id=WP_006250382.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 75192 76085 . - . ID=gene-JYJ20_RS01580;Name=JYJ20_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01580 NZ_JAFIRP010000003.1 Protein Homology CDS 75192 76085 . - 0 ID=cds-WP_006250380.1;Parent=gene-JYJ20_RS01580;Dbxref=GenBank:WP_006250380.1;Name=WP_006250380.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250380.1;locus_tag=JYJ20_RS01580;product=transcriptional regulator GcvA;protein_id=WP_006250380.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 76531 77568 . + . ID=gene-JYJ20_RS01585;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=JYJ20_RS01585 NZ_JAFIRP010000003.1 Protein Homology CDS 76531 77568 . + 0 ID=cds-WP_006250379.1;Parent=gene-JYJ20_RS01585;Dbxref=GenBank:WP_006250379.1;Name=WP_006250379.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250872.1;locus_tag=JYJ20_RS01585;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_006250379.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 77565 78164 . + . ID=gene-JYJ20_RS01590;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=JYJ20_RS01590 NZ_JAFIRP010000003.1 Protein Homology CDS 77565 78164 . + 0 ID=cds-WP_171814965.1;Parent=gene-JYJ20_RS01590;Dbxref=GenBank:WP_171814965.1;Name=WP_171814965.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250378.1;locus_tag=JYJ20_RS01590;product=ribonuclease HII;protein_id=WP_171814965.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 78177 78536 . + . ID=gene-JYJ20_RS01595;Name=JYJ20_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01595 NZ_JAFIRP010000003.1 Protein Homology CDS 78177 78536 . + 0 ID=cds-WP_006250377.1;Parent=gene-JYJ20_RS01595;Dbxref=GenBank:WP_006250377.1;Name=WP_006250377.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250871.1;locus_tag=JYJ20_RS01595;product=HIT domain-containing protein;protein_id=WP_006250377.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 78539 78910 . + . ID=gene-JYJ20_RS01600;Name=JYJ20_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01600 NZ_JAFIRP010000003.1 Protein Homology CDS 78539 78910 . + 0 ID=cds-WP_006250376.1;Parent=gene-JYJ20_RS01600;Dbxref=GenBank:WP_006250376.1;Name=WP_006250376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250376.1;locus_tag=JYJ20_RS01600;product=YcfL family putative periplasmic lipoprotein;protein_id=WP_006250376.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 78945 79574 . - . ID=gene-JYJ20_RS01605;Name=JYJ20_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01605 NZ_JAFIRP010000003.1 Protein Homology CDS 78945 79574 . - 0 ID=cds-WP_006250375.1;Parent=gene-JYJ20_RS01605;Dbxref=GenBank:WP_006250375.1;Name=WP_006250375.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262706.1;locus_tag=JYJ20_RS01605;product=MBL fold metallo-hydrolase;protein_id=WP_006250375.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 79591 80145 . - . ID=gene-JYJ20_RS01610;Name=mepK;gbkey=Gene;gene=mepK;gene_biotype=protein_coding;locus_tag=JYJ20_RS01610 NZ_JAFIRP010000003.1 Protein Homology CDS 79591 80145 . - 0 ID=cds-WP_006250374.1;Parent=gene-JYJ20_RS01610;Dbxref=GenBank:WP_006250374.1;Name=WP_006250374.1;Ontology_term=GO:0006508,GO:0009254,GO:0071555,GO:0004175,GO:0008237,GO:0046872;gbkey=CDS;gene=mepK;go_function=endopeptidase activity|0004175||IEA,metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA,peptidoglycan turnover|0009254||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651225.1;locus_tag=JYJ20_RS01610;product=peptidoglycan L%2CD-endopeptidase MepK;protein_id=WP_006250374.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 80315 81847 . - . ID=gene-JYJ20_RS01615;Name=JYJ20_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01615 NZ_JAFIRP010000003.1 Protein Homology CDS 80315 81847 . - 0 ID=cds-WP_483414094.1;Parent=gene-JYJ20_RS01615;Dbxref=GenBank:WP_483414094.1;Name=WP_483414094.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250373.1;locus_tag=JYJ20_RS01615;product=L%2CD-transpeptidase family protein;protein_id=WP_483414094.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 81938 83950 . - . ID=gene-JYJ20_RS01620;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;gene_synonym=tsp;locus_tag=JYJ20_RS01620 NZ_JAFIRP010000003.1 Protein Homology CDS 81938 83950 . - 0 ID=cds-WP_006250372.1;Parent=gene-JYJ20_RS01620;Dbxref=GenBank:WP_006250372.1;Name=WP_006250372.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250869.1;locus_tag=JYJ20_RS01620;product=carboxy terminal-processing peptidase;protein_id=WP_006250372.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 84036 84557 . - . ID=gene-JYJ20_RS01625;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=JYJ20_RS01625 NZ_JAFIRP010000003.1 Protein Homology CDS 84036 84557 . - 0 ID=cds-WP_209025943.1;Parent=gene-JYJ20_RS01625;Dbxref=GenBank:WP_209025943.1;Name=WP_209025943.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250371.1;locus_tag=JYJ20_RS01625;product=RNA chaperone ProQ;protein_id=WP_209025943.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 84885 85097 . + . ID=gene-JYJ20_RS01630;Name=JYJ20_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01630 NZ_JAFIRP010000003.1 Protein Homology CDS 84885 85097 . + 0 ID=cds-WP_006250370.1;Parent=gene-JYJ20_RS01630;Dbxref=GenBank:WP_006250370.1;Name=WP_006250370.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595803.1;locus_tag=JYJ20_RS01630;product=cold-shock protein;protein_id=WP_006250370.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 85157 86311 . - . ID=gene-JYJ20_RS01635;Name=JYJ20_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01635 NZ_JAFIRP010000003.1 Protein Homology CDS 85157 86311 . - 0 ID=cds-WP_006250369.1;Parent=gene-JYJ20_RS01635;Dbxref=GenBank:WP_006250369.1;Name=WP_006250369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250369.1;locus_tag=JYJ20_RS01635;product=3-phenylpropionate MFS transporter;protein_id=WP_006250369.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 86308 87126 . - . ID=gene-JYJ20_RS01640;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=JYJ20_RS01640 NZ_JAFIRP010000003.1 Protein Homology CDS 86308 87126 . - 0 ID=cds-WP_006250368.1;Parent=gene-JYJ20_RS01640;Dbxref=GenBank:WP_006250368.1;Name=WP_006250368.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875061.1;locus_tag=JYJ20_RS01640;product=pyrroline-5-carboxylate reductase;protein_id=WP_006250368.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 87203 88111 . + . ID=gene-JYJ20_RS01645;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=JYJ20_RS01645 NZ_JAFIRP010000003.1 Protein Homology CDS 87203 88111 . + 0 ID=cds-WP_006250367.1;Parent=gene-JYJ20_RS01645;Dbxref=GenBank:WP_006250367.1;Name=WP_006250367.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991970.1;locus_tag=JYJ20_RS01645;product=recombination-associated protein RdgC;protein_id=WP_006250367.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 88132 88737 . + . ID=gene-JYJ20_RS01650;Name=JYJ20_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01650 NZ_JAFIRP010000003.1 Protein Homology CDS 88132 88737 . + 0 ID=cds-WP_006250366.1;Parent=gene-JYJ20_RS01650;Dbxref=GenBank:WP_006250366.1;Name=WP_006250366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250366.1;locus_tag=JYJ20_RS01650;product=beta-phosphoglucomutase family hydrolase;protein_id=WP_006250366.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 88753 89544 . + . ID=gene-JYJ20_RS01655;Name=JYJ20_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01655 NZ_JAFIRP010000003.1 Protein Homology CDS 88753 89544 . + 0 ID=cds-WP_006250365.1;Parent=gene-JYJ20_RS01655;Dbxref=GenBank:WP_006250365.1;Name=WP_006250365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250864.1;locus_tag=JYJ20_RS01655;product=DUF998 domain-containing protein;protein_id=WP_006250365.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 89548 90690 . + . ID=gene-JYJ20_RS01660;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=JYJ20_RS01660 NZ_JAFIRP010000003.1 Protein Homology CDS 89548 90690 . + 0 ID=cds-WP_006250364.1;Parent=gene-JYJ20_RS01660;Dbxref=GenBank:WP_006250364.1;Name=WP_006250364.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250863.1;locus_tag=JYJ20_RS01660;product=acetylornithine deacetylase;protein_id=WP_006250364.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 90837 91124 . - . ID=gene-JYJ20_RS01665;Name=JYJ20_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01665 NZ_JAFIRP010000003.1 Protein Homology CDS 90837 91124 . - 0 ID=cds-WP_006250362.1;Parent=gene-JYJ20_RS01665;Dbxref=GenBank:WP_006250362.1;Name=WP_006250362.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250362.1;locus_tag=JYJ20_RS01665;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_006250362.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 91117 91308 . - . ID=gene-JYJ20_RS01670;Name=JYJ20_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01670 NZ_JAFIRP010000003.1 Protein Homology CDS 91117 91308 . - 0 ID=cds-WP_006250361.1;Parent=gene-JYJ20_RS01670;Dbxref=GenBank:WP_006250361.1;Name=WP_006250361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250361.1;locus_tag=JYJ20_RS01670;product=hypothetical protein;protein_id=WP_006250361.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 91598 92188 . - . ID=gene-JYJ20_RS01675;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=JYJ20_RS01675 NZ_JAFIRP010000003.1 Protein Homology CDS 91598 92188 . - 0 ID=cds-WP_006250360.1;Parent=gene-JYJ20_RS01675;Dbxref=GenBank:WP_006250360.1;Name=WP_006250360.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250862.1;locus_tag=JYJ20_RS01675;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_006250360.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 92198 92782 . - . ID=gene-JYJ20_RS01680;Name=JYJ20_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01680 NZ_JAFIRP010000003.1 Protein Homology CDS 92198 92782 . - 0 ID=cds-WP_006250359.1;Parent=gene-JYJ20_RS01680;Dbxref=GenBank:WP_006250359.1;Name=WP_006250359.1;Ontology_term=GO:1901135,GO:0008270,GO:0008968,GO:0097367;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652572.1;locus_tag=JYJ20_RS01680;product=D-sedoheptulose-7-phosphate isomerase;protein_id=WP_006250359.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq pseudogene 92788 93107 . - . ID=gene-JYJ20_RS01685;Name=JYJ20_RS01685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS01685;pseudo=true NZ_JAFIRP010000003.1 Protein Homology CDS 92788 93107 . - 0 ID=cds-JYJ20_RS01685;Parent=gene-JYJ20_RS01685;Note=frameshifted;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250860.1;locus_tag=JYJ20_RS01685;product=YraN family protein;pseudo=true;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 93082 94803 . - . ID=gene-JYJ20_RS01690;Name=JYJ20_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01690 NZ_JAFIRP010000003.1 Protein Homology CDS 93082 94803 . - 0 ID=cds-WP_006250357.1;Parent=gene-JYJ20_RS01690;Dbxref=GenBank:WP_006250357.1;Name=WP_006250357.1;Ontology_term=GO:0008360,GO:0009252,GO:0004553,GO:0019899,GO:0030234;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,enzyme binding|0019899||IEA,enzyme regulator activity|0030234||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605209.1;locus_tag=JYJ20_RS01690;product=penicillin-binding protein activator;protein_id=WP_006250357.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 94877 95749 . + . ID=gene-JYJ20_RS01695;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=JYJ20_RS01695 NZ_JAFIRP010000003.1 Protein Homology CDS 94877 95749 . + 0 ID=cds-WP_006250356.1;Parent=gene-JYJ20_RS01695;Dbxref=GenBank:WP_006250356.1;Name=WP_006250356.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250356.1;locus_tag=JYJ20_RS01695;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_006250356.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 95994 97160 . - . ID=gene-JYJ20_RS01700;Name=JYJ20_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01700 NZ_JAFIRP010000003.1 Protein Homology CDS 95994 97160 . - 0 ID=cds-WP_006253755.1;Parent=gene-JYJ20_RS01700;Dbxref=GenBank:WP_006253755.1;Name=WP_006253755.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250355.1;locus_tag=JYJ20_RS01700;product=MFS transporter;protein_id=WP_006253755.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 97312 98826 . - . ID=gene-JYJ20_RS01705;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=JYJ20_RS01705 NZ_JAFIRP010000003.1 Protein Homology CDS 97312 98826 . - 0 ID=cds-WP_006250354.1;Parent=gene-JYJ20_RS01705;Dbxref=GenBank:WP_006250354.1;Name=WP_006250354.1;Ontology_term=GO:0006814,GO:0015824,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250354.1;locus_tag=JYJ20_RS01705;product=sodium/proline symporter PutP;protein_id=WP_006250354.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 98920 99708 . - . ID=gene-JYJ20_RS01710;Name=JYJ20_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01710 NZ_JAFIRP010000003.1 Protein Homology CDS 98920 99708 . - 0 ID=cds-WP_006250353.1;Parent=gene-JYJ20_RS01710;Dbxref=GenBank:WP_006250353.1;Name=WP_006250353.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250353.1;locus_tag=JYJ20_RS01710;product=IclR family transcriptional regulator;protein_id=WP_006250353.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 99705 100283 . - . ID=gene-JYJ20_RS01715;Name=JYJ20_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01715 NZ_JAFIRP010000003.1 Protein Homology CDS 99705 100283 . - 0 ID=cds-WP_006250352.1;Parent=gene-JYJ20_RS01715;Dbxref=GenBank:WP_006250352.1;Name=WP_006250352.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250352.1;locus_tag=JYJ20_RS01715;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_006250352.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 100285 100476 . - . ID=gene-JYJ20_RS01720;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=JYJ20_RS01720 NZ_JAFIRP010000003.1 cmsearch ncRNA 100285 100476 . - . ID=rna-JYJ20_RS01720;Parent=gene-JYJ20_RS01720;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=JYJ20_RS01720;product=6S RNA NZ_JAFIRP010000003.1 cmsearch exon 100285 100476 . - . ID=exon-JYJ20_RS01720-1;Parent=rna-JYJ20_RS01720;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=JYJ20_RS01720;product=6S RNA NZ_JAFIRP010000003.1 RefSeq gene 100581 100871 . - . ID=gene-JYJ20_RS01725;Name=JYJ20_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01725 NZ_JAFIRP010000003.1 Protein Homology CDS 100581 100871 . - 0 ID=cds-WP_006250351.1;Parent=gene-JYJ20_RS01725;Dbxref=GenBank:WP_006250351.1;Name=WP_006250351.1;Ontology_term=GO:0000917,GO:0000921,GO:0043093;gbkey=CDS;go_process=division septum assembly|0000917||IEA,septin ring assembly|0000921||IEA,FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250856.1;locus_tag=JYJ20_RS01725;product=cell division protein ZapA;protein_id=WP_006250351.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 100950 101507 . + . ID=gene-JYJ20_RS01730;Name=JYJ20_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01730 NZ_JAFIRP010000003.1 Protein Homology CDS 100950 101507 . + 0 ID=cds-WP_006250350.1;Parent=gene-JYJ20_RS01730;Dbxref=GenBank:WP_006250350.1;Name=WP_006250350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005624207.1;locus_tag=JYJ20_RS01730;product=UPF0149 family protein;protein_id=WP_006250350.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 101605 102669 . + . ID=gene-JYJ20_RS01735;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=JYJ20_RS01735 NZ_JAFIRP010000003.1 Protein Homology CDS 101605 102669 . + 0 ID=cds-WP_209025944.1;Parent=gene-JYJ20_RS01735;Dbxref=GenBank:WP_209025944.1;Name=WP_209025944.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262703.1;locus_tag=JYJ20_RS01735;product=uroporphyrinogen decarboxylase;protein_id=WP_209025944.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 102816 103406 . + . ID=gene-JYJ20_RS01740;Name=JYJ20_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01740 NZ_JAFIRP010000003.1 Protein Homology CDS 102816 103406 . + 0 ID=cds-WP_209025945.1;Parent=gene-JYJ20_RS01740;Dbxref=GenBank:WP_209025945.1;Name=WP_209025945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005620054.1;locus_tag=JYJ20_RS01740;product=YjaG family protein;protein_id=WP_209025945.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 103524 103814 . + . ID=gene-JYJ20_RS01745;Name=JYJ20_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01745 NZ_JAFIRP010000003.1 Protein Homology CDS 103524 103814 . + 0 ID=cds-WP_226318009.1;Parent=gene-JYJ20_RS01745;Dbxref=GenBank:WP_226318009.1;Name=WP_226318009.1;Ontology_term=GO:0030261,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005819506.1;locus_tag=JYJ20_RS01745;product=HU family DNA-binding protein;protein_id=WP_226318009.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 103903 104463 . - . ID=gene-JYJ20_RS01750;Name=JYJ20_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01750 NZ_JAFIRP010000003.1 Protein Homology CDS 103903 104463 . - 0 ID=cds-WP_006249749.1;Parent=gene-JYJ20_RS01750;Dbxref=GenBank:WP_006249749.1;Name=WP_006249749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249749.1;locus_tag=JYJ20_RS01750;product=hypothetical protein;protein_id=WP_006249749.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 104609 107551 . - . ID=gene-JYJ20_RS01755;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=JYJ20_RS01755 NZ_JAFIRP010000003.1 Protein Homology CDS 104609 107551 . - 0 ID=cds-WP_006253756.1;Parent=gene-JYJ20_RS01755;Dbxref=GenBank:WP_006253756.1;Name=WP_006253756.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253756.1;locus_tag=JYJ20_RS01755;product=ribonuclease E;protein_id=WP_006253756.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 108008 108853 . - . ID=gene-JYJ20_RS01760;Name=JYJ20_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01760 NZ_JAFIRP010000003.1 Protein Homology CDS 108008 108853 . - 0 ID=cds-WP_015484077.1;Parent=gene-JYJ20_RS01760;Dbxref=GenBank:WP_015484077.1;Name=WP_015484077.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251630.1;locus_tag=JYJ20_RS01760;product=cysteine hydrolase family protein;protein_id=WP_015484077.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 108980 109804 . + . ID=gene-JYJ20_RS01765;Name=JYJ20_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01765 NZ_JAFIRP010000003.1 Protein Homology CDS 108980 109804 . + 0 ID=cds-WP_006249745.1;Parent=gene-JYJ20_RS01765;Dbxref=GenBank:WP_006249745.1;Name=WP_006249745.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249745.1;locus_tag=JYJ20_RS01765;product=AraC family transcriptional regulator;protein_id=WP_006249745.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 109889 111352 . - . ID=gene-JYJ20_RS01770;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=JYJ20_RS01770 NZ_JAFIRP010000003.1 Protein Homology CDS 109889 111352 . - 0 ID=cds-WP_006253757.1;Parent=gene-JYJ20_RS01770;Dbxref=GenBank:WP_006253757.1;Name=WP_006253757.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617934.1;locus_tag=JYJ20_RS01770;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_006253757.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 111489 112463 . + . ID=gene-JYJ20_RS01775;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=JYJ20_RS01775 NZ_JAFIRP010000003.1 Protein Homology CDS 111489 112463 . + 0 ID=cds-WP_209025946.1;Parent=gene-JYJ20_RS01775;Dbxref=GenBank:WP_209025946.1;Name=WP_209025946.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251634.1;locus_tag=JYJ20_RS01775;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_209025946.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 112515 112835 . - . ID=gene-JYJ20_RS01780;Name=JYJ20_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01780 NZ_JAFIRP010000003.1 Protein Homology CDS 112515 112835 . - 0 ID=cds-WP_006249742.1;Parent=gene-JYJ20_RS01780;Dbxref=GenBank:WP_006249742.1;Name=WP_006249742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005621693.1;locus_tag=JYJ20_RS01780;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_006249742.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 112976 115339 . + . ID=gene-JYJ20_RS01785;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=JYJ20_RS01785 NZ_JAFIRP010000003.1 Protein Homology CDS 112976 115339 . + 0 ID=cds-WP_006249741.1;Parent=gene-JYJ20_RS01785;Dbxref=GenBank:WP_006249741.1;Name=WP_006249741.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005602130.1;locus_tag=JYJ20_RS01785;product=ribonuclease R;protein_id=WP_006249741.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 115343 115609 . + . ID=gene-JYJ20_RS01790;Name=JYJ20_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01790 NZ_JAFIRP010000003.1 Protein Homology CDS 115343 115609 . + 0 ID=cds-WP_006249740.1;Parent=gene-JYJ20_RS01790;Dbxref=GenBank:WP_006249740.1;Name=WP_006249740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251635.1;locus_tag=JYJ20_RS01790;product=hypothetical protein;protein_id=WP_006249740.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 115832 116290 . + . ID=gene-JYJ20_RS01795;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=JYJ20_RS01795 NZ_JAFIRP010000003.1 Protein Homology CDS 115832 116290 . + 0 ID=cds-WP_006249739.1;Parent=gene-JYJ20_RS01795;Dbxref=GenBank:WP_006249739.1;Name=WP_006249739.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616487.1;locus_tag=JYJ20_RS01795;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_006249739.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 116306 117244 . + . ID=gene-JYJ20_RS01800;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=JYJ20_RS01800 NZ_JAFIRP010000003.1 Protein Homology CDS 116306 117244 . + 0 ID=cds-WP_006249738.1;Parent=gene-JYJ20_RS01800;Dbxref=GenBank:WP_006249738.1;Name=WP_006249738.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249738.1;locus_tag=JYJ20_RS01800;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_006249738.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 117263 117574 . + . ID=gene-JYJ20_RS01805;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=JYJ20_RS01805 NZ_JAFIRP010000003.1 Protein Homology CDS 117263 117574 . + 0 ID=cds-WP_006249737.1;Parent=gene-JYJ20_RS01805;Dbxref=GenBank:WP_006249737.1;Name=WP_006249737.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249737.1;locus_tag=JYJ20_RS01805;product=cell division protein FtsL;protein_id=WP_006249737.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 117578 119638 . + . ID=gene-JYJ20_RS01810;Name=JYJ20_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01810 NZ_JAFIRP010000003.1 Protein Homology CDS 117578 119638 . + 0 ID=cds-WP_006249736.1;Parent=gene-JYJ20_RS01810;Dbxref=GenBank:WP_006249736.1;Name=WP_006249736.1;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251637.1;locus_tag=JYJ20_RS01810;product=penicillin-binding transpeptidase domain-containing protein;protein_id=WP_006249736.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 119647 121137 . + . ID=gene-JYJ20_RS01815;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=JYJ20_RS01815 NZ_JAFIRP010000003.1 Protein Homology CDS 119647 121137 . + 0 ID=cds-WP_006249735.1;Parent=gene-JYJ20_RS01815;Dbxref=GenBank:WP_006249735.1;Name=WP_006249735.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251638.1;locus_tag=JYJ20_RS01815;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_006249735.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 121225 122619 . + . ID=gene-JYJ20_RS01820;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=JYJ20_RS01820 NZ_JAFIRP010000003.1 Protein Homology CDS 121225 122619 . + 0 ID=cds-WP_006249734.1;Parent=gene-JYJ20_RS01820;Dbxref=GenBank:WP_006249734.1;Name=WP_006249734.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992122.1;locus_tag=JYJ20_RS01820;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_006249734.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 122640 123722 . + . ID=gene-JYJ20_RS01825;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=JYJ20_RS01825 NZ_JAFIRP010000003.1 Protein Homology CDS 122640 123722 . + 0 ID=cds-WP_006249733.1;Parent=gene-JYJ20_RS01825;Dbxref=GenBank:WP_006249733.1;Name=WP_006249733.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944283.1;locus_tag=JYJ20_RS01825;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_006249733.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 123786 125087 . + . ID=gene-JYJ20_RS01830;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=JYJ20_RS01830 NZ_JAFIRP010000003.1 Protein Homology CDS 123786 125087 . + 0 ID=cds-WP_006249732.1;Parent=gene-JYJ20_RS01830;Dbxref=GenBank:WP_006249732.1;Name=WP_006249732.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249732.1;locus_tag=JYJ20_RS01830;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_006249732.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 125087 126265 . + . ID=gene-JYJ20_RS01835;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=JYJ20_RS01835 NZ_JAFIRP010000003.1 Protein Homology CDS 125087 126265 . + 0 ID=cds-WP_006249731.1;Parent=gene-JYJ20_RS01835;Dbxref=GenBank:WP_006249731.1;Name=WP_006249731.1;Ontology_term=GO:0009252,GO:0051301,GO:0016020;gbkey=CDS;gene=ftsW;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249731.1;locus_tag=JYJ20_RS01835;product=putative lipid II flippase FtsW;protein_id=WP_006249731.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 126384 127439 . + . ID=gene-JYJ20_RS01840;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=JYJ20_RS01840 NZ_JAFIRP010000003.1 Protein Homology CDS 126384 127439 . + 0 ID=cds-WP_209025947.1;Parent=gene-JYJ20_RS01840;Dbxref=GenBank:WP_209025947.1;Name=WP_209025947.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252434.1;locus_tag=JYJ20_RS01840;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_209025947.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 127515 128942 . + . ID=gene-JYJ20_RS01845;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=JYJ20_RS01845 NZ_JAFIRP010000003.1 Protein Homology CDS 127515 128942 . + 0 ID=cds-WP_006249730.1;Parent=gene-JYJ20_RS01845;Dbxref=GenBank:WP_006249730.1;Name=WP_006249730.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249730.1;locus_tag=JYJ20_RS01845;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_006249730.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 129032 129943 . + . ID=gene-JYJ20_RS01850;Name=JYJ20_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01850 NZ_JAFIRP010000003.1 Protein Homology CDS 129032 129943 . + 0 ID=cds-WP_006249729.1;Parent=gene-JYJ20_RS01850;Dbxref=GenBank:WP_006249729.1;Name=WP_006249729.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992116.1;locus_tag=JYJ20_RS01850;product=D-alanine--D-alanine ligase;protein_id=WP_006249729.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 129943 130734 . + . ID=gene-JYJ20_RS01855;Name=JYJ20_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01855 NZ_JAFIRP010000003.1 Protein Homology CDS 129943 130734 . + 0 ID=cds-WP_006249728.1;Parent=gene-JYJ20_RS01855;Dbxref=GenBank:WP_006249728.1;Name=WP_006249728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253187.1;locus_tag=JYJ20_RS01855;product=cell division protein FtsQ/DivIB;protein_id=WP_006249728.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 130757 132028 . + . ID=gene-JYJ20_RS01860;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=JYJ20_RS01860 NZ_JAFIRP010000003.1 Protein Homology CDS 130757 132028 . + 0 ID=cds-WP_006249727.1;Parent=gene-JYJ20_RS01860;Dbxref=GenBank:WP_006249727.1;Name=WP_006249727.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249727.1;locus_tag=JYJ20_RS01860;product=cell division protein FtsA;protein_id=WP_006249727.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 132061 133308 . + . ID=gene-JYJ20_RS01865;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=JYJ20_RS01865 NZ_JAFIRP010000003.1 Protein Homology CDS 132061 133308 . + 0 ID=cds-WP_006249726.1;Parent=gene-JYJ20_RS01865;Dbxref=GenBank:WP_006249726.1;Name=WP_006249726.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249726.1;locus_tag=JYJ20_RS01865;product=cell division protein FtsZ;protein_id=WP_006249726.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 133340 134260 . + . ID=gene-JYJ20_RS01870;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=JYJ20_RS01870 NZ_JAFIRP010000003.1 Protein Homology CDS 133340 134260 . + 0 ID=cds-WP_006249725.1;Parent=gene-JYJ20_RS01870;Dbxref=GenBank:WP_006249725.1;Name=WP_006249725.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005723052.1;locus_tag=JYJ20_RS01870;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_006249725.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 134433 136115 . + . ID=gene-JYJ20_RS01875;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=JYJ20_RS01875 NZ_JAFIRP010000003.1 Protein Homology CDS 134433 136115 . + 0 ID=cds-WP_006249724.1;Parent=gene-JYJ20_RS01875;Dbxref=GenBank:WP_006249724.1;Name=WP_006249724.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249724.1;locus_tag=JYJ20_RS01875;product=DNA repair protein RecN;protein_id=WP_006249724.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 136162 136237 . - . ID=gene-JYJ20_RS01880;Name=JYJ20_RS01880;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS01880 NZ_JAFIRP010000003.1 tRNAscan-SE tRNA 136162 136237 . - . ID=rna-JYJ20_RS01880;Parent=gene-JYJ20_RS01880;anticodon=(pos:complement(136202..136204));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS01880;product=tRNA-Ala NZ_JAFIRP010000003.1 tRNAscan-SE exon 136162 136237 . - . ID=exon-JYJ20_RS01880-1;Parent=rna-JYJ20_RS01880;anticodon=(pos:complement(136202..136204));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS01880;product=tRNA-Ala NZ_JAFIRP010000003.1 RefSeq gene 136317 137756 . - . ID=gene-JYJ20_RS01885;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=JYJ20_RS01885 NZ_JAFIRP010000003.1 Protein Homology CDS 136317 137756 . - 0 ID=cds-WP_006249723.1;Parent=gene-JYJ20_RS01885;Dbxref=GenBank:WP_006249723.1;Name=WP_006249723.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007526628.1;locus_tag=JYJ20_RS01885;product=glutamate--tRNA ligase;protein_id=WP_006249723.1;transl_table=11 NZ_JAFIRP010000003.1 RefSeq gene 137931 138006 . + . ID=gene-JYJ20_RS01890;Name=JYJ20_RS01890;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS01890 NZ_JAFIRP010000003.1 tRNAscan-SE tRNA 137931 138006 . + . ID=rna-JYJ20_RS01890;Parent=gene-JYJ20_RS01890;anticodon=(pos:137964..137966);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS01890;product=tRNA-Val NZ_JAFIRP010000003.1 tRNAscan-SE exon 137931 138006 . + . ID=exon-JYJ20_RS01890-1;Parent=rna-JYJ20_RS01890;anticodon=(pos:137964..137966);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS01890;product=tRNA-Val NZ_JAFIRP010000003.1 RefSeq gene 138055 138130 . + . ID=gene-JYJ20_RS01895;Name=JYJ20_RS01895;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS01895 NZ_JAFIRP010000003.1 tRNAscan-SE tRNA 138055 138130 . + . ID=rna-JYJ20_RS01895;Parent=gene-JYJ20_RS01895;anticodon=(pos:138088..138090);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS01895;product=tRNA-Val NZ_JAFIRP010000003.1 tRNAscan-SE exon 138055 138130 . + . ID=exon-JYJ20_RS01895-1;Parent=rna-JYJ20_RS01895;anticodon=(pos:138088..138090);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS01895;product=tRNA-Val NZ_JAFIRP010000003.1 RefSeq gene 138183 138258 . + . ID=gene-JYJ20_RS01900;Name=JYJ20_RS01900;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS01900 NZ_JAFIRP010000003.1 tRNAscan-SE tRNA 138183 138258 . + . ID=rna-JYJ20_RS01900;Parent=gene-JYJ20_RS01900;anticodon=(pos:138216..138218);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS01900;product=tRNA-Val NZ_JAFIRP010000003.1 tRNAscan-SE exon 138183 138258 . + . ID=exon-JYJ20_RS01900-1;Parent=rna-JYJ20_RS01900;anticodon=(pos:138216..138218);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS01900;product=tRNA-Val NZ_JAFIRP010000003.1 RefSeq gene 138307 138382 . + . ID=gene-JYJ20_RS01905;Name=JYJ20_RS01905;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS01905 NZ_JAFIRP010000003.1 tRNAscan-SE tRNA 138307 138382 . + . ID=rna-JYJ20_RS01905;Parent=gene-JYJ20_RS01905;anticodon=(pos:138340..138342);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS01905;product=tRNA-Val NZ_JAFIRP010000003.1 tRNAscan-SE exon 138307 138382 . + . ID=exon-JYJ20_RS01905-1;Parent=rna-JYJ20_RS01905;anticodon=(pos:138340..138342);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS01905;product=tRNA-Val NZ_JAFIRP010000003.1 RefSeq gene 138536 140029 . - . ID=gene-JYJ20_RS01910;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=JYJ20_RS01910 NZ_JAFIRP010000003.1 Protein Homology CDS 138536 140029 . - 0 ID=cds-WP_006250142.1;Parent=gene-JYJ20_RS01910;Dbxref=GenBank:WP_006250142.1;Name=WP_006250142.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253760.1;locus_tag=JYJ20_RS01910;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_006250142.1;transl_table=11 ##sequence-region NZ_JAFIRP010000030.1 1 64236 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000030.1 RefSeq region 1 64236 . + . ID=NZ_JAFIRP010000030.1:1..64236;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000030.1 RefSeq gene 1 2840 . - . ID=gene-JYJ20_RS10015;Name=JYJ20_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10015;partial=true;start_range=.,1 NZ_JAFIRP010000030.1 Protein Homology CDS 1 2840 . - 0 ID=cds-WP_245155414.1;Parent=gene-JYJ20_RS10015;Dbxref=GenBank:WP_245155414.1;Name=WP_245155414.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248686.1;locus_tag=JYJ20_RS10015;partial=true;product=UvrD-helicase domain-containing protein;protein_id=WP_245155414.1;start_range=.,1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 2849 4660 . - . ID=gene-JYJ20_RS10020;Name=JYJ20_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10020 NZ_JAFIRP010000030.1 Protein Homology CDS 2849 4660 . - 0 ID=cds-WP_006248687.1;Parent=gene-JYJ20_RS10020;Dbxref=GenBank:WP_006248687.1;Name=WP_006248687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478332.1;locus_tag=JYJ20_RS10020;product=hypothetical protein;protein_id=WP_006248687.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq pseudogene 4764 5621 . - . ID=gene-JYJ20_RS10025;Name=JYJ20_RS10025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS10025;partial=true;pseudo=true;start_range=.,4764 NZ_JAFIRP010000030.1 Protein Homology CDS 4764 5621 . - 0 ID=cds-JYJ20_RS10025;Parent=gene-JYJ20_RS10025;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613315.1;locus_tag=JYJ20_RS10025;partial=true;product=YifB family Mg chelatase-like AAA ATPase;pseudo=true;start_range=.,4764;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 5753 6091 . - . ID=gene-JYJ20_RS10030;Name=JYJ20_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10030 NZ_JAFIRP010000030.1 Protein Homology CDS 5753 6091 . - 0 ID=cds-WP_006253483.1;Parent=gene-JYJ20_RS10030;Dbxref=GenBank:WP_006253483.1;Name=WP_006253483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253483.1;locus_tag=JYJ20_RS10030;product=hypothetical protein;protein_id=WP_006253483.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 6198 7379 . + . ID=gene-JYJ20_RS10035;Name=JYJ20_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10035 NZ_JAFIRP010000030.1 Protein Homology CDS 6198 7379 . + 0 ID=cds-WP_006250157.1;Parent=gene-JYJ20_RS10035;Dbxref=GenBank:WP_006250157.1;Name=WP_006250157.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652177.1;locus_tag=JYJ20_RS10035;product=FAD-dependent oxidoreductase;protein_id=WP_006250157.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 7421 8257 . - . ID=gene-JYJ20_RS10040;Name=ftsN;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=JYJ20_RS10040 NZ_JAFIRP010000030.1 Protein Homology CDS 7421 8257 . - 0 ID=cds-WP_006250158.1;Parent=gene-JYJ20_RS10040;Dbxref=GenBank:WP_006250158.1;Name=WP_006250158.1;Ontology_term=GO:0000910,GO:0005515;gbkey=CDS;gene=ftsN;go_function=protein binding|0005515||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613437.1;locus_tag=JYJ20_RS10040;product=cell division protein FtsN;protein_id=WP_006250158.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 8348 9100 . - . ID=gene-JYJ20_RS10045;Name=JYJ20_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10045 NZ_JAFIRP010000030.1 Protein Homology CDS 8348 9100 . - 0 ID=cds-WP_006250159.1;Parent=gene-JYJ20_RS10045;Dbxref=GenBank:WP_006250159.1;Name=WP_006250159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251478.1;locus_tag=JYJ20_RS10045;product=class I SAM-dependent methyltransferase;protein_id=WP_006250159.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 9097 9780 . - . ID=gene-JYJ20_RS10050;Name=JYJ20_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10050 NZ_JAFIRP010000030.1 Protein Homology CDS 9097 9780 . - 0 ID=cds-WP_245155415.1;Parent=gene-JYJ20_RS10050;Dbxref=GenBank:WP_245155415.1;Name=WP_245155415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251479.1;locus_tag=JYJ20_RS10050;product=M15 family metallopeptidase;protein_id=WP_245155415.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 9907 10731 . + . ID=gene-JYJ20_RS10055;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=JYJ20_RS10055 NZ_JAFIRP010000030.1 Protein Homology CDS 9907 10731 . + 0 ID=cds-WP_006250161.1;Parent=gene-JYJ20_RS10055;Dbxref=GenBank:WP_006250161.1;Name=WP_006250161.1;Ontology_term=GO:0009085,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650734.1;locus_tag=JYJ20_RS10055;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_006250161.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 10791 11159 . + . ID=gene-JYJ20_RS10060;Name=JYJ20_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10060 NZ_JAFIRP010000030.1 Protein Homology CDS 10791 11159 . + 0 ID=cds-WP_209026211.1;Parent=gene-JYJ20_RS10060;Dbxref=GenBank:WP_209026211.1;Name=WP_209026211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250162.1;locus_tag=JYJ20_RS10060;product=GNAT family N-acetyltransferase;protein_id=WP_209026211.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 11245 11682 . + . ID=gene-JYJ20_RS10065;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=JYJ20_RS10065 NZ_JAFIRP010000030.1 Protein Homology CDS 11245 11682 . + 0 ID=cds-WP_006250163.1;Parent=gene-JYJ20_RS10065;Dbxref=GenBank:WP_006250163.1;Name=WP_006250163.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250163.1;locus_tag=JYJ20_RS10065;product=type II 3-dehydroquinate dehydratase;protein_id=WP_006250163.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 11692 12474 . + . ID=gene-JYJ20_RS10070;Name=JYJ20_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10070 NZ_JAFIRP010000030.1 Protein Homology CDS 11692 12474 . + 0 ID=cds-WP_006250164.1;Parent=gene-JYJ20_RS10070;Dbxref=GenBank:WP_006250164.1;Name=WP_006250164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251481.1;locus_tag=JYJ20_RS10070;product=glycosyltransferase family 32 protein;protein_id=WP_006250164.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 12727 13194 . + . ID=gene-JYJ20_RS10075;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=JYJ20_RS10075 NZ_JAFIRP010000030.1 Protein Homology CDS 12727 13194 . + 0 ID=cds-WP_006250166.1;Parent=gene-JYJ20_RS10075;Dbxref=GenBank:WP_006250166.1;Name=WP_006250166.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251482.1;locus_tag=JYJ20_RS10075;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_006250166.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 13266 14609 . + . ID=gene-JYJ20_RS10080;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=JYJ20_RS10080 NZ_JAFIRP010000030.1 Protein Homology CDS 13266 14609 . + 0 ID=cds-WP_006250167.1;Parent=gene-JYJ20_RS10080;Dbxref=GenBank:WP_006250167.1;Name=WP_006250167.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015431873.1;locus_tag=JYJ20_RS10080;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_006250167.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 14758 15954 . + . ID=gene-JYJ20_RS10085;Name=JYJ20_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10085 NZ_JAFIRP010000030.1 Protein Homology CDS 14758 15954 . + 0 ID=cds-WP_006250168.1;Parent=gene-JYJ20_RS10085;Dbxref=GenBank:WP_006250168.1;Name=WP_006250168.1;Ontology_term=GO:0043687,GO:0008198,GO:0016706;gbkey=CDS;go_function=ferrous iron binding|0008198||IEA,2-oxoglutarate-dependent dioxygenase activity|0016706||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875146.1;locus_tag=JYJ20_RS10085;product=ribosomal protein uL16 3-hydroxylase;protein_id=WP_006250168.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 16047 16379 . + . ID=gene-JYJ20_RS10090;Name=JYJ20_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10090 NZ_JAFIRP010000030.1 Protein Homology CDS 16047 16379 . + 0 ID=cds-WP_006250169.1;Parent=gene-JYJ20_RS10090;Dbxref=GenBank:WP_006250169.1;Name=WP_006250169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250169.1;locus_tag=JYJ20_RS10090;product=MazG nucleotide pyrophosphohydrolase domain-containing protein;protein_id=WP_006250169.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 16389 16712 . - . ID=gene-JYJ20_RS10095;Name=JYJ20_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10095 NZ_JAFIRP010000030.1 Protein Homology CDS 16389 16712 . - 0 ID=cds-WP_006250170.1;Parent=gene-JYJ20_RS10095;Dbxref=GenBank:WP_006250170.1;Name=WP_006250170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250170.1;locus_tag=JYJ20_RS10095;product=hypothetical protein;protein_id=WP_006250170.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 16714 17070 . - . ID=gene-JYJ20_RS10100;Name=JYJ20_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10100 NZ_JAFIRP010000030.1 Protein Homology CDS 16714 17070 . - 0 ID=cds-WP_006251485.1;Parent=gene-JYJ20_RS10100;Dbxref=GenBank:WP_006251485.1;Name=WP_006251485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251485.1;locus_tag=JYJ20_RS10100;product=hypothetical protein;protein_id=WP_006251485.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 17226 17576 . - . ID=gene-JYJ20_RS10105;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=JYJ20_RS10105 NZ_JAFIRP010000030.1 Protein Homology CDS 17226 17576 . - 0 ID=cds-WP_006250172.1;Parent=gene-JYJ20_RS10105;Dbxref=GenBank:WP_006250172.1;Name=WP_006250172.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945693.1;locus_tag=JYJ20_RS10105;product=50S ribosomal protein L19;protein_id=WP_006250172.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 17603 18358 . - . ID=gene-JYJ20_RS10110;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=JYJ20_RS10110 NZ_JAFIRP010000030.1 Protein Homology CDS 17603 18358 . - 0 ID=cds-WP_006250173.1;Parent=gene-JYJ20_RS10110;Dbxref=GenBank:WP_006250173.1;Name=WP_006250173.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652725.1;locus_tag=JYJ20_RS10110;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_006250173.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 18403 18930 . - . ID=gene-JYJ20_RS10115;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=JYJ20_RS10115 NZ_JAFIRP010000030.1 Protein Homology CDS 18403 18930 . - 0 ID=cds-WP_006250174.1;Parent=gene-JYJ20_RS10115;Dbxref=GenBank:WP_006250174.1;Name=WP_006250174.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005626427.1;locus_tag=JYJ20_RS10115;product=ribosome maturation factor RimM;protein_id=WP_006250174.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 18963 19211 . - . ID=gene-JYJ20_RS10120;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=JYJ20_RS10120 NZ_JAFIRP010000030.1 Protein Homology CDS 18963 19211 . - 0 ID=cds-WP_006250175.1;Parent=gene-JYJ20_RS10120;Dbxref=GenBank:WP_006250175.1;Name=WP_006250175.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945696.1;locus_tag=JYJ20_RS10120;product=30S ribosomal protein S16;protein_id=WP_006250175.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 19476 19718 . + . ID=gene-JYJ20_RS10125;Name=JYJ20_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10125 NZ_JAFIRP010000030.1 Protein Homology CDS 19476 19718 . + 0 ID=cds-WP_006251489.1;Parent=gene-JYJ20_RS10125;Dbxref=GenBank:WP_006251489.1;Name=WP_006251489.1;Ontology_term=GO:0009401,GO:0034219,GO:0008982,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251489.1;locus_tag=JYJ20_RS10125;product=PTS sugar transporter subunit IIB;protein_id=WP_006251489.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 19762 20586 . - . ID=gene-JYJ20_RS10130;Name=JYJ20_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10130 NZ_JAFIRP010000030.1 Protein Homology CDS 19762 20586 . - 0 ID=cds-WP_006250177.1;Parent=gene-JYJ20_RS10130;Dbxref=GenBank:WP_006250177.1;Name=WP_006250177.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252863.1;locus_tag=JYJ20_RS10130;product=MurR/RpiR family transcriptional regulator;protein_id=WP_006250177.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 20724 22064 . - . ID=gene-JYJ20_RS10135;Name=JYJ20_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10135 NZ_JAFIRP010000030.1 Protein Homology CDS 20724 22064 . - 0 ID=cds-WP_006250178.1;Parent=gene-JYJ20_RS10135;Dbxref=GenBank:WP_006250178.1;Name=WP_006250178.1;Ontology_term=GO:0009401,GO:0016773,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251491.1;locus_tag=JYJ20_RS10135;product=PTS sugar transporter subunit IIC;protein_id=WP_006250178.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 22067 23407 . - . ID=gene-JYJ20_RS10140;Name=JYJ20_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10140 NZ_JAFIRP010000030.1 Protein Homology CDS 22067 23407 . - 0 ID=cds-WP_006250179.1;Parent=gene-JYJ20_RS10140;Dbxref=GenBank:WP_006250179.1;Name=WP_006250179.1;Ontology_term=GO:0005975,GO:0004560;gbkey=CDS;go_function=alpha-L-fucosidase activity|0004560||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250179.1;locus_tag=JYJ20_RS10140;product=alpha-L-fucosidase;protein_id=WP_006250179.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 23696 25612 . - . ID=gene-JYJ20_RS10145;Name=JYJ20_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10145 NZ_JAFIRP010000030.1 Protein Homology CDS 23696 25612 . - 0 ID=cds-WP_006251493.1;Parent=gene-JYJ20_RS10145;Dbxref=GenBank:WP_006251493.1;Name=WP_006251493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251493.1;locus_tag=JYJ20_RS10145;product=bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2-deoxyphosphogluconate aldolase;protein_id=WP_006251493.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 25880 27814 . + . ID=gene-JYJ20_RS10150;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=JYJ20_RS10150 NZ_JAFIRP010000030.1 Protein Homology CDS 25880 27814 . + 0 ID=cds-WP_006250051.1;Parent=gene-JYJ20_RS10150;Dbxref=GenBank:WP_006250051.1;Name=WP_006250051.1;Ontology_term=GO:0019310,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=hydrolase activity%2C acting on carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015433647.1;locus_tag=JYJ20_RS10150;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_006250051.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 27941 28837 . + . ID=gene-JYJ20_RS10155;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=JYJ20_RS10155 NZ_JAFIRP010000030.1 Protein Homology CDS 27941 28837 . + 0 ID=cds-WP_006250054.1;Parent=gene-JYJ20_RS10155;Dbxref=GenBank:WP_006250054.1;Name=WP_006250054.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015939821.1;locus_tag=JYJ20_RS10155;product=myo-inosose-2 dehydratase;protein_id=WP_006250054.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 28839 29849 . + . ID=gene-JYJ20_RS10160;Name=iolG;gbkey=Gene;gene=iolG;gene_biotype=protein_coding;locus_tag=JYJ20_RS10160 NZ_JAFIRP010000030.1 Protein Homology CDS 28839 29849 . + 0 ID=cds-WP_006250055.1;Parent=gene-JYJ20_RS10160;Dbxref=GenBank:WP_006250055.1;Name=WP_006250055.1;Ontology_term=GO:0019310,GO:0050112;gbkey=CDS;gene=iolG;go_function=inositol 2-dehydrogenase (NAD+) activity|0050112||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005537901.1;locus_tag=JYJ20_RS10160;product=inositol 2-dehydrogenase;protein_id=WP_006250055.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 30228 30650 . - . ID=gene-JYJ20_RS10165;Name=JYJ20_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10165 NZ_JAFIRP010000030.1 Protein Homology CDS 30228 30650 . - 0 ID=cds-WP_006250057.1;Parent=gene-JYJ20_RS10165;Dbxref=GenBank:WP_006250057.1;Name=WP_006250057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250057.1;locus_tag=JYJ20_RS10165;product=hypothetical protein;protein_id=WP_006250057.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 30720 31853 . - . ID=gene-JYJ20_RS10170;Name=JYJ20_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10170 NZ_JAFIRP010000030.1 Protein Homology CDS 30720 31853 . - 0 ID=cds-WP_006250058.1;Parent=gene-JYJ20_RS10170;Dbxref=GenBank:WP_006250058.1;Name=WP_006250058.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015433643.1;locus_tag=JYJ20_RS10170;product=Gfo/Idh/MocA family protein;protein_id=WP_006250058.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 31984 33012 . - . ID=gene-JYJ20_RS10175;Name=JYJ20_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10175 NZ_JAFIRP010000030.1 Protein Homology CDS 31984 33012 . - 0 ID=cds-WP_006250059.1;Parent=gene-JYJ20_RS10175;Dbxref=GenBank:WP_006250059.1;Name=WP_006250059.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250059.1;locus_tag=JYJ20_RS10175;product=ABC transporter permease;protein_id=WP_006250059.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 33024 34568 . - . ID=gene-JYJ20_RS10180;Name=JYJ20_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10180 NZ_JAFIRP010000030.1 Protein Homology CDS 33024 34568 . - 0 ID=cds-WP_209026212.1;Parent=gene-JYJ20_RS10180;Dbxref=GenBank:WP_209026212.1;Name=WP_209026212.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252861.1;locus_tag=JYJ20_RS10180;product=sugar ABC transporter ATP-binding protein;protein_id=WP_209026212.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 34619 35557 . - . ID=gene-JYJ20_RS10185;Name=JYJ20_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10185 NZ_JAFIRP010000030.1 Protein Homology CDS 34619 35557 . - 0 ID=cds-WP_006250061.1;Parent=gene-JYJ20_RS10185;Dbxref=GenBank:WP_006250061.1;Name=WP_006250061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250061.1;locus_tag=JYJ20_RS10185;product=sugar ABC transporter substrate-binding protein;protein_id=WP_006250061.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 35889 37400 . - . ID=gene-JYJ20_RS10190;Name=JYJ20_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10190 NZ_JAFIRP010000030.1 Protein Homology CDS 35889 37400 . - 0 ID=cds-WP_006253486.1;Parent=gene-JYJ20_RS10190;Dbxref=GenBank:WP_006253486.1;Name=WP_006253486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251499.1;locus_tag=JYJ20_RS10190;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_006253486.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 37619 38443 . + . ID=gene-JYJ20_RS10195;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=JYJ20_RS10195 NZ_JAFIRP010000030.1 Protein Homology CDS 37619 38443 . + 0 ID=cds-WP_006253487.1;Parent=gene-JYJ20_RS10195;Dbxref=GenBank:WP_006253487.1;Name=WP_006253487.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251500.1;locus_tag=JYJ20_RS10195;product=5-deoxy-glucuronate isomerase;protein_id=WP_006253487.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 38519 39970 . - . ID=gene-JYJ20_RS10200;Name=JYJ20_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10200 NZ_JAFIRP010000030.1 Protein Homology CDS 38519 39970 . - 0 ID=cds-WP_006250007.1;Parent=gene-JYJ20_RS10200;Dbxref=GenBank:WP_006250007.1;Name=WP_006250007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250007.1;locus_tag=JYJ20_RS10200;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_006250007.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 40148 41458 . - . ID=gene-JYJ20_RS10205;Name=JYJ20_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10205 NZ_JAFIRP010000030.1 Protein Homology CDS 40148 41458 . - 0 ID=cds-WP_006250008.1;Parent=gene-JYJ20_RS10205;Dbxref=GenBank:WP_006250008.1;Name=WP_006250008.1;Ontology_term=GO:0015740,GO:0015556,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250008.1;locus_tag=JYJ20_RS10205;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_006250008.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 41474 42169 . - . ID=gene-JYJ20_RS10210;Name=cuyB;gbkey=Gene;gene=cuyB;gene_biotype=protein_coding;locus_tag=JYJ20_RS10210 NZ_JAFIRP010000030.1 Protein Homology CDS 41474 42169 . - 0 ID=cds-WP_006250009.1;Parent=gene-JYJ20_RS10210;Dbxref=GenBank:WP_006250009.1;Name=WP_006250009.1;gbkey=CDS;gene=cuyB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251503.1;locus_tag=JYJ20_RS10210;product=cysteate racemase;protein_id=WP_006250009.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 42385 43299 . + . ID=gene-JYJ20_RS10215;Name=hypT;gbkey=Gene;gene=hypT;gene_biotype=protein_coding;gene_synonym=qseD;locus_tag=JYJ20_RS10215 NZ_JAFIRP010000030.1 Protein Homology CDS 42385 43299 . + 0 ID=cds-WP_006250010.1;Parent=gene-JYJ20_RS10215;Dbxref=GenBank:WP_006250010.1;Name=WP_006250010.1;gbkey=CDS;gene=hypT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250010.1;locus_tag=JYJ20_RS10215;product=hypochlorite stress DNA-binding transcriptional regulator HypT;protein_id=WP_006250010.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 43384 44733 . - . ID=gene-JYJ20_RS10220;Name=JYJ20_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10220 NZ_JAFIRP010000030.1 Protein Homology CDS 43384 44733 . - 0 ID=cds-WP_006250011.1;Parent=gene-JYJ20_RS10220;Dbxref=GenBank:WP_006250011.1;Name=WP_006250011.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599098.1;locus_tag=JYJ20_RS10220;product=GntP family permease;protein_id=WP_006250011.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 44920 45435 . + . ID=gene-JYJ20_RS10225;Name=JYJ20_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10225 NZ_JAFIRP010000030.1 Protein Homology CDS 44920 45435 . + 0 ID=cds-WP_006250012.1;Parent=gene-JYJ20_RS10225;Dbxref=GenBank:WP_006250012.1;Name=WP_006250012.1;Ontology_term=GO:0046177,GO:0005524,GO:0046316;gbkey=CDS;go_function=ATP binding|0005524||IEA,gluconokinase activity|0046316||IEA;go_process=obsolete D-gluconate catabolic process|0046177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250012.1;locus_tag=JYJ20_RS10225;product=gluconokinase;protein_id=WP_006250012.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 45489 46487 . - . ID=gene-JYJ20_RS10230;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=JYJ20_RS10230 NZ_JAFIRP010000030.1 Protein Homology CDS 45489 46487 . - 0 ID=cds-WP_006250013.1;Parent=gene-JYJ20_RS10230;Dbxref=GenBank:WP_006250013.1;Name=WP_006250013.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674159.1;locus_tag=JYJ20_RS10230;product=gluconate operon transcriptional repressor GntR;protein_id=WP_006250013.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 46580 47740 . - . ID=gene-JYJ20_RS10235;Name=JYJ20_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10235 NZ_JAFIRP010000030.1 Protein Homology CDS 46580 47740 . - 0 ID=cds-WP_006250014.1;Parent=gene-JYJ20_RS10235;Dbxref=GenBank:WP_006250014.1;Name=WP_006250014.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251508.1;locus_tag=JYJ20_RS10235;product=XylR family transcriptional regulator;protein_id=WP_006250014.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 47863 48249 . - . ID=gene-JYJ20_RS10240;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=JYJ20_RS10240 NZ_JAFIRP010000030.1 Protein Homology CDS 47863 48249 . - 0 ID=cds-WP_006250015.1;Parent=gene-JYJ20_RS10240;Dbxref=GenBank:WP_006250015.1;Name=WP_006250015.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992360.1;locus_tag=JYJ20_RS10240;product=50S ribosomal protein L17;protein_id=WP_006250015.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 48285 49274 . - . ID=gene-JYJ20_RS10245;Name=JYJ20_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10245 NZ_JAFIRP010000030.1 Protein Homology CDS 48285 49274 . - 0 ID=cds-WP_006250016.1;Parent=gene-JYJ20_RS10245;Dbxref=GenBank:WP_006250016.1;Name=WP_006250016.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011217146.1;locus_tag=JYJ20_RS10245;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_006250016.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 49305 49931 . - . ID=gene-JYJ20_RS10250;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=JYJ20_RS10250 NZ_JAFIRP010000030.1 Protein Homology CDS 49305 49931 . - 0 ID=cds-WP_006250017.1;Parent=gene-JYJ20_RS10250;Dbxref=GenBank:WP_006250017.1;Name=WP_006250017.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599325.1;locus_tag=JYJ20_RS10250;product=30S ribosomal protein S4;protein_id=WP_006250017.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 49960 50349 . - . ID=gene-JYJ20_RS10255;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=JYJ20_RS10255 NZ_JAFIRP010000030.1 Protein Homology CDS 49960 50349 . - 0 ID=cds-WP_209026213.1;Parent=gene-JYJ20_RS10255;Dbxref=GenBank:WP_209026213.1;Name=WP_209026213.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010869057.1;locus_tag=JYJ20_RS10255;product=30S ribosomal protein S11;protein_id=WP_209026213.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 50366 50722 . - . ID=gene-JYJ20_RS10260;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=JYJ20_RS10260 NZ_JAFIRP010000030.1 Protein Homology CDS 50366 50722 . - 0 ID=cds-WP_005599322.1;Parent=gene-JYJ20_RS10260;Dbxref=GenBank:WP_005599322.1;Name=WP_005599322.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018356918.1;locus_tag=JYJ20_RS10260;product=30S ribosomal protein S13;protein_id=WP_005599322.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 50860 50973 . - . ID=gene-JYJ20_RS10265;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=JYJ20_RS10265 NZ_JAFIRP010000030.1 Protein Homology CDS 50860 50973 . - 0 ID=cds-WP_006250018.1;Parent=gene-JYJ20_RS10265;Dbxref=GenBank:WP_006250018.1;Name=WP_006250018.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250018.1;locus_tag=JYJ20_RS10265;product=50S ribosomal protein L36;protein_id=WP_006250018.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 50998 52317 . - . ID=gene-JYJ20_RS10270;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=JYJ20_RS10270 NZ_JAFIRP010000030.1 Protein Homology CDS 50998 52317 . - 0 ID=cds-WP_006250019.1;Parent=gene-JYJ20_RS10270;Dbxref=GenBank:WP_006250019.1;Name=WP_006250019.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251510.1;locus_tag=JYJ20_RS10270;product=preprotein translocase subunit SecY;protein_id=WP_006250019.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 52320 52754 . - . ID=gene-JYJ20_RS10275;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=JYJ20_RS10275 NZ_JAFIRP010000030.1 Protein Homology CDS 52320 52754 . - 0 ID=cds-WP_006250020.1;Parent=gene-JYJ20_RS10275;Dbxref=GenBank:WP_006250020.1;Name=WP_006250020.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945703.1;locus_tag=JYJ20_RS10275;product=50S ribosomal protein L15;protein_id=WP_006250020.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 52759 52935 . - . ID=gene-JYJ20_RS10280;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=JYJ20_RS10280 NZ_JAFIRP010000030.1 Protein Homology CDS 52759 52935 . - 0 ID=cds-WP_006250021.1;Parent=gene-JYJ20_RS10280;Dbxref=GenBank:WP_006250021.1;Name=WP_006250021.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041604457.1;locus_tag=JYJ20_RS10280;product=50S ribosomal protein L30;protein_id=WP_006250021.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 52942 53442 . - . ID=gene-JYJ20_RS10285;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=JYJ20_RS10285 NZ_JAFIRP010000030.1 Protein Homology CDS 52942 53442 . - 0 ID=cds-WP_006250022.1;Parent=gene-JYJ20_RS10285;Dbxref=GenBank:WP_006250022.1;Name=WP_006250022.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018356922.1;locus_tag=JYJ20_RS10285;product=30S ribosomal protein S5;protein_id=WP_006250022.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 53457 53810 . - . ID=gene-JYJ20_RS10290;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=JYJ20_RS10290 NZ_JAFIRP010000030.1 Protein Homology CDS 53457 53810 . - 0 ID=cds-WP_006250023.1;Parent=gene-JYJ20_RS10290;Dbxref=GenBank:WP_006250023.1;Name=WP_006250023.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945706.1;locus_tag=JYJ20_RS10290;product=50S ribosomal protein L18;protein_id=WP_006250023.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 53825 54358 . - . ID=gene-JYJ20_RS10295;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=JYJ20_RS10295 NZ_JAFIRP010000030.1 Protein Homology CDS 53825 54358 . - 0 ID=cds-WP_006250024.1;Parent=gene-JYJ20_RS10295;Dbxref=GenBank:WP_006250024.1;Name=WP_006250024.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009500767.1;locus_tag=JYJ20_RS10295;product=50S ribosomal protein L6;protein_id=WP_006250024.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 54375 54767 . - . ID=gene-JYJ20_RS10300;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=JYJ20_RS10300 NZ_JAFIRP010000030.1 Protein Homology CDS 54375 54767 . - 0 ID=cds-WP_006250025.1;Parent=gene-JYJ20_RS10300;Dbxref=GenBank:WP_006250025.1;Name=WP_006250025.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011201192.1;locus_tag=JYJ20_RS10300;product=30S ribosomal protein S8;protein_id=WP_006250025.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 54804 55109 . - . ID=gene-JYJ20_RS10305;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=JYJ20_RS10305 NZ_JAFIRP010000030.1 Protein Homology CDS 54804 55109 . - 0 ID=cds-WP_006250026.1;Parent=gene-JYJ20_RS10305;Dbxref=GenBank:WP_006250026.1;Name=WP_006250026.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=JYJ20_RS10305;product=30S ribosomal protein S14;protein_id=WP_006250026.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 55121 55660 . - . ID=gene-JYJ20_RS10310;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=JYJ20_RS10310 NZ_JAFIRP010000030.1 Protein Homology CDS 55121 55660 . - 0 ID=cds-WP_006250027.1;Parent=gene-JYJ20_RS10310;Dbxref=GenBank:WP_006250027.1;Name=WP_006250027.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005625881.1;locus_tag=JYJ20_RS10310;product=50S ribosomal protein L5;protein_id=WP_006250027.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 55678 55989 . - . ID=gene-JYJ20_RS10315;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=JYJ20_RS10315 NZ_JAFIRP010000030.1 Protein Homology CDS 55678 55989 . - 0 ID=cds-WP_006250028.1;Parent=gene-JYJ20_RS10315;Dbxref=GenBank:WP_006250028.1;Name=WP_006250028.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992365.1;locus_tag=JYJ20_RS10315;product=50S ribosomal protein L24;protein_id=WP_006250028.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 56000 56371 . - . ID=gene-JYJ20_RS10320;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=JYJ20_RS10320 NZ_JAFIRP010000030.1 Protein Homology CDS 56000 56371 . - 0 ID=cds-WP_005711998.1;Parent=gene-JYJ20_RS10320;Dbxref=GenBank:WP_005711998.1;Name=WP_005711998.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005501250.1;locus_tag=JYJ20_RS10320;product=50S ribosomal protein L14;protein_id=WP_005711998.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 56594 58429 . - . ID=gene-JYJ20_RS10325;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=JYJ20_RS10325 NZ_JAFIRP010000030.1 Protein Homology CDS 56594 58429 . - 0 ID=cds-WP_006249867.1;Parent=gene-JYJ20_RS10325;Dbxref=GenBank:WP_006249867.1;Name=WP_006249867.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=L-glutamine:D-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945651.1;locus_tag=JYJ20_RS10325;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_006249867.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 58477 59238 . - . ID=gene-JYJ20_RS10330;Name=JYJ20_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10330 NZ_JAFIRP010000030.1 Protein Homology CDS 58477 59238 . - 0 ID=cds-WP_006253488.1;Parent=gene-JYJ20_RS10330;Dbxref=GenBank:WP_006253488.1;Name=WP_006253488.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251516.1;locus_tag=JYJ20_RS10330;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_006253488.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 59395 59565 . - . ID=gene-JYJ20_RS10335;Name=JYJ20_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10335 NZ_JAFIRP010000030.1 Protein Homology CDS 59395 59565 . - 0 ID=cds-WP_370501622.1;Parent=gene-JYJ20_RS10335;Dbxref=GenBank:WP_370501622.1;Name=WP_370501622.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251517.1;locus_tag=JYJ20_RS10335;product=glycine zipper 2TM domain-containing protein;protein_id=WP_370501622.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 59821 60855 . + . ID=gene-JYJ20_RS10340;Name=JYJ20_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10340 NZ_JAFIRP010000030.1 Protein Homology CDS 59821 60855 . + 0 ID=cds-WP_006253489.1;Parent=gene-JYJ20_RS10340;Dbxref=GenBank:WP_006253489.1;Name=WP_006253489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253489.1;locus_tag=JYJ20_RS10340;product=ABC transporter substrate-binding protein;protein_id=WP_006253489.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 60923 62959 . + . ID=gene-JYJ20_RS10345;Name=JYJ20_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10345 NZ_JAFIRP010000030.1 Protein Homology CDS 60923 62959 . + 0 ID=cds-WP_209026214.1;Parent=gene-JYJ20_RS10345;Dbxref=GenBank:WP_209026214.1;Name=WP_209026214.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249830.1;locus_tag=JYJ20_RS10345;product=ABC transporter permease;protein_id=WP_209026214.1;transl_table=11 NZ_JAFIRP010000030.1 RefSeq gene 63057 64106 . + . ID=gene-JYJ20_RS10350;Name=fbpC;gbkey=Gene;gene=fbpC;gene_biotype=protein_coding;locus_tag=JYJ20_RS10350 NZ_JAFIRP010000030.1 Protein Homology CDS 63057 64106 . + 0 ID=cds-WP_209026215.1;Parent=gene-JYJ20_RS10350;Dbxref=GenBank:WP_209026215.1;Name=WP_209026215.1;Ontology_term=GO:0055085,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=fbpC;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249831.1;locus_tag=JYJ20_RS10350;product=ferric ABC transporter ATP-binding protein;protein_id=WP_209026215.1;transl_table=11 ##sequence-region NZ_JAFIRP010000031.1 1 2117 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000031.1 RefSeq region 1 2117 . + . ID=NZ_JAFIRP010000031.1:1..2117;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000031.1 RefSeq gene 1 420 . - . ID=gene-JYJ20_RS10355;Name=JYJ20_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10355;partial=true;start_range=.,1 NZ_JAFIRP010000031.1 Protein Homology CDS 1 420 . - 0 ID=cds-WP_209026216.1;Parent=gene-JYJ20_RS10355;Dbxref=GenBank:WP_209026216.1;Name=WP_209026216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340813.1;locus_tag=JYJ20_RS10355;partial=true;product=TIGR03757 family integrating conjugative element protein;protein_id=WP_209026216.1;start_range=.,1;transl_table=11 NZ_JAFIRP010000031.1 RefSeq gene 796 1149 . + . ID=gene-JYJ20_RS10360;Name=JYJ20_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10360 NZ_JAFIRP010000031.1 Protein Homology CDS 796 1149 . + 0 ID=cds-WP_006248914.1;Parent=gene-JYJ20_RS10360;Dbxref=GenBank:WP_006248914.1;Name=WP_006248914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248914.1;locus_tag=JYJ20_RS10360;product=hypothetical protein;protein_id=WP_006248914.1;transl_table=11 NZ_JAFIRP010000031.1 RefSeq gene 1221 1466 . + . ID=gene-JYJ20_RS10365;Name=JYJ20_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10365 NZ_JAFIRP010000031.1 Protein Homology CDS 1221 1466 . + 0 ID=cds-WP_021280007.1;Parent=gene-JYJ20_RS10365;Dbxref=GenBank:WP_021280007.1;Name=WP_021280007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248915.1;locus_tag=JYJ20_RS10365;product=hypothetical protein;protein_id=WP_021280007.1;transl_table=11 NZ_JAFIRP010000031.1 RefSeq gene 1475 1717 . + . ID=gene-JYJ20_RS10370;Name=JYJ20_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10370 NZ_JAFIRP010000031.1 Protein Homology CDS 1475 1717 . + 0 ID=cds-WP_006251599.1;Parent=gene-JYJ20_RS10370;Dbxref=GenBank:WP_006251599.1;Name=WP_006251599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251599.1;locus_tag=JYJ20_RS10370;product=hypothetical protein;protein_id=WP_006251599.1;transl_table=11 NZ_JAFIRP010000031.1 RefSeq gene 1714 1839 . + . ID=gene-JYJ20_RS12380;Name=JYJ20_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12380 NZ_JAFIRP010000031.1 GeneMarkS-2+ CDS 1714 1839 . + 0 ID=cds-WP_006248917.1;Parent=gene-JYJ20_RS12380;Dbxref=GenBank:WP_006248917.1;Name=WP_006248917.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS12380;product=hypothetical protein;protein_id=WP_006248917.1;transl_table=11 NZ_JAFIRP010000031.1 RefSeq pseudogene 1936 2117 . + . ID=gene-JYJ20_RS12245;Name=JYJ20_RS12245;end_range=2117,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS12245;partial=true;pseudo=true NZ_JAFIRP010000031.1 Protein Homology CDS 1936 2117 . + 0 ID=cds-JYJ20_RS12245;Parent=gene-JYJ20_RS12245;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2117,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484311.1;locus_tag=JYJ20_RS12245;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAFIRP010000032.1 1 30346 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000032.1 RefSeq region 1 30346 . + . ID=NZ_JAFIRP010000032.1:1..30346;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000032.1 RefSeq gene 197 1132 . - . ID=gene-JYJ20_RS10375;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=JYJ20_RS10375 NZ_JAFIRP010000032.1 Protein Homology CDS 197 1132 . - 0 ID=cds-WP_006249934.1;Parent=gene-JYJ20_RS10375;Dbxref=GenBank:WP_006249934.1;Name=WP_006249934.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249934.1;locus_tag=JYJ20_RS10375;product=permease-like cell division protein FtsX;protein_id=WP_006249934.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 1142 1795 . - . ID=gene-JYJ20_RS10380;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=JYJ20_RS10380 NZ_JAFIRP010000032.1 Protein Homology CDS 1142 1795 . - 0 ID=cds-WP_006249933.1;Parent=gene-JYJ20_RS10380;Dbxref=GenBank:WP_006249933.1;Name=WP_006249933.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249933.1;locus_tag=JYJ20_RS10380;product=cell division ATP-binding protein FtsE;protein_id=WP_006249933.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 1788 3284 . - . ID=gene-JYJ20_RS10385;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=JYJ20_RS10385 NZ_JAFIRP010000032.1 Protein Homology CDS 1788 3284 . - 0 ID=cds-WP_006249932.1;Parent=gene-JYJ20_RS10385;Dbxref=GenBank:WP_006249932.1;Name=WP_006249932.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249932.1;locus_tag=JYJ20_RS10385;product=signal recognition particle-docking protein FtsY;protein_id=WP_006249932.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 3363 3953 . + . ID=gene-JYJ20_RS10390;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=JYJ20_RS10390 NZ_JAFIRP010000032.1 Protein Homology CDS 3363 3953 . + 0 ID=cds-WP_006249931.1;Parent=gene-JYJ20_RS10390;Dbxref=GenBank:WP_006249931.1;Name=WP_006249931.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249931.1;locus_tag=JYJ20_RS10390;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_006249931.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 4037 4351 . + . ID=gene-JYJ20_RS10395;Name=JYJ20_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10395 NZ_JAFIRP010000032.1 Protein Homology CDS 4037 4351 . + 0 ID=cds-WP_006249930.1;Parent=gene-JYJ20_RS10395;Dbxref=GenBank:WP_006249930.1;Name=WP_006249930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249930.1;locus_tag=JYJ20_RS10395;product=HI1450 family dsDNA-mimic protein;protein_id=WP_006249930.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 4364 4876 . + . ID=gene-JYJ20_RS10400;Name=hpaC;gbkey=Gene;gene=hpaC;gene_biotype=protein_coding;locus_tag=JYJ20_RS10400 NZ_JAFIRP010000032.1 Protein Homology CDS 4364 4876 . + 0 ID=cds-WP_006249929.1;Parent=gene-JYJ20_RS10400;Dbxref=GenBank:WP_006249929.1;Name=WP_006249929.1;Ontology_term=GO:0042537,GO:0016651,GO:0051287;gbkey=CDS;gene=hpaC;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,NAD binding|0051287||IEA;go_process=benzene-containing compound metabolic process|0042537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252146.1;locus_tag=JYJ20_RS10400;product=4-hydroxyphenylacetate 3-monooxygenase%2C reductase component;protein_id=WP_006249929.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 4994 5866 . + . ID=gene-JYJ20_RS10405;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=JYJ20_RS10405 NZ_JAFIRP010000032.1 Protein Homology CDS 4994 5866 . + 0 ID=cds-WP_006249928.1;Parent=gene-JYJ20_RS10405;Dbxref=GenBank:WP_006249928.1;Name=WP_006249928.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252973.1;locus_tag=JYJ20_RS10405;product=SAM-dependent methyltransferase TehB;protein_id=WP_006249928.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 6004 7041 . + . ID=gene-JYJ20_RS10410;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=JYJ20_RS10410 NZ_JAFIRP010000032.1 Protein Homology CDS 6004 7041 . + 0 ID=cds-WP_006249927.1;Parent=gene-JYJ20_RS10410;Dbxref=GenBank:WP_006249927.1;Name=WP_006249927.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011962107.1;locus_tag=JYJ20_RS10410;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_006249927.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 7119 7397 . + . ID=gene-JYJ20_RS10415;Name=JYJ20_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10415 NZ_JAFIRP010000032.1 Protein Homology CDS 7119 7397 . + 0 ID=cds-WP_006249926.1;Parent=gene-JYJ20_RS10415;Dbxref=GenBank:WP_006249926.1;Name=WP_006249926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249926.1;locus_tag=JYJ20_RS10415;product=DUF1294 domain-containing protein;protein_id=WP_006249926.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 7540 8967 . + . ID=gene-JYJ20_RS10420;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=JYJ20_RS10420 NZ_JAFIRP010000032.1 Protein Homology CDS 7540 8967 . + 0 ID=cds-WP_006249925.1;Parent=gene-JYJ20_RS10420;Dbxref=GenBank:WP_006249925.1;Name=WP_006249925.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608308.1;locus_tag=JYJ20_RS10420;product=aspartate ammonia-lyase;protein_id=WP_006249925.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 9042 11060 . - . ID=gene-JYJ20_RS10425;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=JYJ20_RS10425 NZ_JAFIRP010000032.1 Protein Homology CDS 9042 11060 . - 0 ID=cds-WP_006249924.1;Parent=gene-JYJ20_RS10425;Dbxref=GenBank:WP_006249924.1;Name=WP_006249924.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=rep;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600347.1;locus_tag=JYJ20_RS10425;product=DNA helicase Rep;protein_id=WP_006249924.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 11308 12423 . + . ID=gene-JYJ20_RS10430;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=JYJ20_RS10430 NZ_JAFIRP010000032.1 Protein Homology CDS 11308 12423 . + 0 ID=cds-WP_006249922.1;Parent=gene-JYJ20_RS10430;Dbxref=GenBank:WP_006249922.1;Name=WP_006249922.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249922.1;locus_tag=JYJ20_RS10430;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_006249922.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 12410 13273 . + . ID=gene-JYJ20_RS10435;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=JYJ20_RS10435 NZ_JAFIRP010000032.1 Protein Homology CDS 12410 13273 . + 0 ID=cds-WP_209026217.1;Parent=gene-JYJ20_RS10435;Dbxref=GenBank:WP_209026217.1;Name=WP_209026217.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249921.1;locus_tag=JYJ20_RS10435;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_209026217.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 13273 14040 . + . ID=gene-JYJ20_RS10440;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=JYJ20_RS10440 NZ_JAFIRP010000032.1 Protein Homology CDS 13273 14040 . + 0 ID=cds-WP_006249920.1;Parent=gene-JYJ20_RS10440;Dbxref=GenBank:WP_006249920.1;Name=WP_006249920.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007525438.1;locus_tag=JYJ20_RS10440;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_006249920.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 14241 15164 . + . ID=gene-JYJ20_RS10445;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=JYJ20_RS10445 NZ_JAFIRP010000032.1 Protein Homology CDS 14241 15164 . + 0 ID=cds-WP_006249919.1;Parent=gene-JYJ20_RS10445;Dbxref=GenBank:WP_006249919.1;Name=WP_006249919.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249919.1;locus_tag=JYJ20_RS10445;product=oligopeptide ABC transporter permease OppB;protein_id=WP_006249919.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 15179 16078 . + . ID=gene-JYJ20_RS10450;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=JYJ20_RS10450 NZ_JAFIRP010000032.1 Protein Homology CDS 15179 16078 . + 0 ID=cds-WP_006249918.1;Parent=gene-JYJ20_RS10450;Dbxref=GenBank:WP_006249918.1;Name=WP_006249918.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249918.1;locus_tag=JYJ20_RS10450;product=oligopeptide ABC transporter permease OppC;protein_id=WP_006249918.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 16088 17683 . + . ID=gene-JYJ20_RS10455;Name=JYJ20_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10455 NZ_JAFIRP010000032.1 Protein Homology CDS 16088 17683 . + 0 ID=cds-WP_006249917.1;Parent=gene-JYJ20_RS10455;Dbxref=GenBank:WP_006249917.1;Name=WP_006249917.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252976.1;locus_tag=JYJ20_RS10455;product=ABC transporter ATP-binding protein;protein_id=WP_006249917.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 17863 18258 . + . ID=gene-JYJ20_RS10460;Name=JYJ20_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10460 NZ_JAFIRP010000032.1 Protein Homology CDS 17863 18258 . + 0 ID=cds-WP_006249916.1;Parent=gene-JYJ20_RS10460;Dbxref=GenBank:WP_006249916.1;Name=WP_006249916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249916.1;locus_tag=JYJ20_RS10460;product=ACP-like domain-containing protein;protein_id=WP_006249916.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 18468 20627 . - . ID=gene-JYJ20_RS10465;Name=JYJ20_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10465 NZ_JAFIRP010000032.1 Protein Homology CDS 18468 20627 . - 0 ID=cds-WP_209026218.1;Parent=gene-JYJ20_RS10465;Dbxref=GenBank:WP_209026218.1;Name=WP_209026218.1;Ontology_term=GO:0055085,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249915.1;locus_tag=JYJ20_RS10465;product=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;protein_id=WP_209026218.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 20757 21611 . + . ID=gene-JYJ20_RS10470;Name=JYJ20_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10470 NZ_JAFIRP010000032.1 Protein Homology CDS 20757 21611 . + 0 ID=cds-WP_006249914.1;Parent=gene-JYJ20_RS10470;Dbxref=GenBank:WP_006249914.1;Name=WP_006249914.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249914.1;locus_tag=JYJ20_RS10470;product=heme/hemin ABC transporter substrate-binding protein;protein_id=WP_006249914.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 21622 22608 . + . ID=gene-JYJ20_RS10475;Name=JYJ20_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10475 NZ_JAFIRP010000032.1 Protein Homology CDS 21622 22608 . + 0 ID=cds-WP_006249913.1;Parent=gene-JYJ20_RS10475;Dbxref=GenBank:WP_006249913.1;Name=WP_006249913.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252138.1;locus_tag=JYJ20_RS10475;product=FecCD family ABC transporter permease;protein_id=WP_006249913.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 22608 23414 . + . ID=gene-JYJ20_RS10480;Name=JYJ20_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10480 NZ_JAFIRP010000032.1 Protein Homology CDS 22608 23414 . + 0 ID=cds-WP_006249912.1;Parent=gene-JYJ20_RS10480;Dbxref=GenBank:WP_006249912.1;Name=WP_006249912.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249912.1;locus_tag=JYJ20_RS10480;product=ABC transporter ATP-binding protein;protein_id=WP_006249912.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 23435 24073 . - . ID=gene-JYJ20_RS10485;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=JYJ20_RS10485 NZ_JAFIRP010000032.1 Protein Homology CDS 23435 24073 . - 0 ID=cds-WP_015587131.1;Parent=gene-JYJ20_RS10485;Dbxref=GenBank:WP_015587131.1;Name=WP_015587131.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005693938.1;locus_tag=JYJ20_RS10485;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_015587131.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 24180 26423 . - . ID=gene-JYJ20_RS10490;Name=JYJ20_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10490 NZ_JAFIRP010000032.1 Protein Homology CDS 24180 26423 . - 0 ID=cds-WP_245155416.1;Parent=gene-JYJ20_RS10490;Dbxref=GenBank:WP_245155416.1;Name=WP_245155416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651518.1;locus_tag=JYJ20_RS10490;product=TonB-dependent receptor domain-containing protein;protein_id=WP_245155416.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 26432 27229 . - . ID=gene-JYJ20_RS10495;Name=JYJ20_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10495 NZ_JAFIRP010000032.1 Protein Homology CDS 26432 27229 . - 0 ID=cds-WP_006253747.1;Parent=gene-JYJ20_RS10495;Dbxref=GenBank:WP_006253747.1;Name=WP_006253747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253747.1;locus_tag=JYJ20_RS10495;product=ChaN family lipoprotein;protein_id=WP_006253747.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 27426 28688 . - . ID=gene-JYJ20_RS10500;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=JYJ20_RS10500 NZ_JAFIRP010000032.1 Protein Homology CDS 27426 28688 . - 0 ID=cds-WP_006249908.1;Parent=gene-JYJ20_RS10500;Dbxref=GenBank:WP_006249908.1;Name=WP_006249908.1;Ontology_term=GO:0006545,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process|0006545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005723619.1;locus_tag=JYJ20_RS10500;product=serine hydroxymethyltransferase;protein_id=WP_006249908.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 28964 29185 . - . ID=gene-JYJ20_RS10505;Name=JYJ20_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10505 NZ_JAFIRP010000032.1 Protein Homology CDS 28964 29185 . - 0 ID=cds-WP_006249906.1;Parent=gene-JYJ20_RS10505;Dbxref=GenBank:WP_006249906.1;Name=WP_006249906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249906.1;locus_tag=JYJ20_RS10505;product=hypothetical protein;protein_id=WP_006249906.1;transl_table=11 NZ_JAFIRP010000032.1 RefSeq gene 29273 30304 . - . ID=gene-JYJ20_RS10510;Name=JYJ20_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10510 NZ_JAFIRP010000032.1 Protein Homology CDS 29273 30304 . - 0 ID=cds-WP_006249905.1;Parent=gene-JYJ20_RS10510;Dbxref=GenBank:WP_006249905.1;Name=WP_006249905.1;Ontology_term=GO:0071265,GO:0003871,GO:0008270;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252134.1;locus_tag=JYJ20_RS10510;product=methionine synthase;protein_id=WP_006249905.1;transl_table=11 ##sequence-region NZ_JAFIRP010000033.1 1 6380 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000033.1 RefSeq region 1 6380 . + . ID=NZ_JAFIRP010000033.1:1..6380;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000033.1 RefSeq pseudogene 43 294 . + . ID=gene-JYJ20_RS12250;Name=JYJ20_RS12250;end_range=294,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS12250;partial=true;pseudo=true NZ_JAFIRP010000033.1 Protein Homology CDS 43 294 . + 0 ID=cds-JYJ20_RS12250;Parent=gene-JYJ20_RS12250;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=294,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248912.1;locus_tag=JYJ20_RS12250;partial=true;product=TIGR03756 family integrating conjugative element protein;pseudo=true;transl_table=11 NZ_JAFIRP010000033.1 RefSeq gene 271 621 . + . ID=gene-JYJ20_RS12255;Name=JYJ20_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12255 NZ_JAFIRP010000033.1 Protein Homology CDS 271 621 . + 0 ID=cds-WP_245155418.1;Parent=gene-JYJ20_RS12255;Dbxref=GenBank:WP_245155418.1;Name=WP_245155418.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03757.1;locus_tag=JYJ20_RS12255;product=TIGR03757 family integrating conjugative element protein;protein_id=WP_245155418.1;transl_table=11 NZ_JAFIRP010000033.1 RefSeq gene 922 1068 . - . ID=gene-JYJ20_RS10520;Name=JYJ20_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10520 NZ_JAFIRP010000033.1 Protein Homology CDS 922 1068 . - 0 ID=cds-WP_006248358.1;Parent=gene-JYJ20_RS10520;Dbxref=GenBank:WP_006248358.1;Name=WP_006248358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248358.1;locus_tag=JYJ20_RS10520;product=hypothetical protein;protein_id=WP_006248358.1;transl_table=11 NZ_JAFIRP010000033.1 RefSeq gene 1072 1326 . - . ID=gene-JYJ20_RS10525;Name=JYJ20_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10525 NZ_JAFIRP010000033.1 Protein Homology CDS 1072 1326 . - 0 ID=cds-WP_006248357.1;Parent=gene-JYJ20_RS10525;Dbxref=GenBank:WP_006248357.1;Name=WP_006248357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248357.1;locus_tag=JYJ20_RS10525;product=hypothetical protein;protein_id=WP_006248357.1;transl_table=11 NZ_JAFIRP010000033.1 RefSeq gene 1565 1819 . + . ID=gene-JYJ20_RS10530;Name=JYJ20_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10530 NZ_JAFIRP010000033.1 Protein Homology CDS 1565 1819 . + 0 ID=cds-WP_052500180.1;Parent=gene-JYJ20_RS10530;Dbxref=GenBank:WP_052500180.1;Name=WP_052500180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248356.1;locus_tag=JYJ20_RS10530;product=hypothetical protein;protein_id=WP_052500180.1;transl_table=11 NZ_JAFIRP010000033.1 RefSeq gene 2020 2196 . + . ID=gene-JYJ20_RS10535;Name=JYJ20_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10535 NZ_JAFIRP010000033.1 Protein Homology CDS 2020 2196 . + 0 ID=cds-WP_006248355.1;Parent=gene-JYJ20_RS10535;Dbxref=GenBank:WP_006248355.1;Name=WP_006248355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248355.1;locus_tag=JYJ20_RS10535;product=hypothetical protein;protein_id=WP_006248355.1;transl_table=11 NZ_JAFIRP010000033.1 RefSeq gene 2157 2708 . + . ID=gene-JYJ20_RS10540;Name=JYJ20_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10540 NZ_JAFIRP010000033.1 Protein Homology CDS 2157 2708 . + 0 ID=cds-WP_006248354.1;Parent=gene-JYJ20_RS10540;Dbxref=GenBank:WP_006248354.1;Name=WP_006248354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248354.1;locus_tag=JYJ20_RS10540;product=hypothetical protein;protein_id=WP_006248354.1;transl_table=11 NZ_JAFIRP010000033.1 RefSeq gene 2763 3032 . + . ID=gene-JYJ20_RS10545;Name=JYJ20_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10545 NZ_JAFIRP010000033.1 Protein Homology CDS 2763 3032 . + 0 ID=cds-WP_209026224.1;Parent=gene-JYJ20_RS10545;Dbxref=GenBank:WP_209026224.1;Name=WP_209026224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484351.1;locus_tag=JYJ20_RS10545;product=hypothetical protein;protein_id=WP_209026224.1;transl_table=11 NZ_JAFIRP010000033.1 RefSeq gene 3098 3334 . + . ID=gene-JYJ20_RS10550;Name=JYJ20_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10550 NZ_JAFIRP010000033.1 Protein Homology CDS 3098 3334 . + 0 ID=cds-WP_245155417.1;Parent=gene-JYJ20_RS10550;Dbxref=GenBank:WP_245155417.1;Name=WP_245155417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248329.1;locus_tag=JYJ20_RS10550;product=hypothetical protein;protein_id=WP_245155417.1;transl_table=11 NZ_JAFIRP010000033.1 RefSeq gene 3488 3643 . + . ID=gene-JYJ20_RS10555;Name=JYJ20_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10555 NZ_JAFIRP010000033.1 Protein Homology CDS 3488 3643 . + 0 ID=cds-WP_209026221.1;Parent=gene-JYJ20_RS10555;Dbxref=GenBank:WP_209026221.1;Name=WP_209026221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248328.1;locus_tag=JYJ20_RS10555;product=hypothetical protein;protein_id=WP_209026221.1;transl_table=11 NZ_JAFIRP010000033.1 RefSeq gene 3697 3855 . + . ID=gene-JYJ20_RS10560;Name=JYJ20_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10560 NZ_JAFIRP010000033.1 Protein Homology CDS 3697 3855 . + 0 ID=cds-WP_209026222.1;Parent=gene-JYJ20_RS10560;Dbxref=GenBank:WP_209026222.1;Name=WP_209026222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248327.1;locus_tag=JYJ20_RS10560;product=hypothetical protein;protein_id=WP_209026222.1;transl_table=11 NZ_JAFIRP010000033.1 RefSeq gene 3848 4165 . + . ID=gene-JYJ20_RS10565;Name=JYJ20_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10565 NZ_JAFIRP010000033.1 Protein Homology CDS 3848 4165 . + 0 ID=cds-WP_006248326.1;Parent=gene-JYJ20_RS10565;Dbxref=GenBank:WP_006248326.1;Name=WP_006248326.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248326.1;locus_tag=JYJ20_RS10565;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_006248326.1;transl_table=11 NZ_JAFIRP010000033.1 RefSeq gene 4286 4522 . + . ID=gene-JYJ20_RS10570;Name=JYJ20_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10570 NZ_JAFIRP010000033.1 GeneMarkS-2+ CDS 4286 4522 . + 0 ID=cds-WP_134916634.1;Parent=gene-JYJ20_RS10570;Dbxref=GenBank:WP_134916634.1;Name=WP_134916634.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS10570;product=hypothetical protein;protein_id=WP_134916634.1;transl_table=11 NZ_JAFIRP010000033.1 RefSeq gene 4627 5049 . - . ID=gene-JYJ20_RS10575;Name=JYJ20_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10575 NZ_JAFIRP010000033.1 Protein Homology CDS 4627 5049 . - 0 ID=cds-WP_031200901.1;Parent=gene-JYJ20_RS10575;Dbxref=GenBank:WP_031200901.1;Name=WP_031200901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251677.1;locus_tag=JYJ20_RS10575;product=DUF417 family protein;protein_id=WP_031200901.1;transl_table=11 NZ_JAFIRP010000033.1 RefSeq gene 5185 6380 . + . ID=gene-JYJ20_RS10580;Name=rng;end_range=6380,.;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=JYJ20_RS10580;partial=true NZ_JAFIRP010000033.1 Protein Homology CDS 5185 6380 . + 0 ID=cds-WP_209026223.1;Parent=gene-JYJ20_RS10580;Dbxref=GenBank:WP_209026223.1;Name=WP_209026223.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;end_range=6380,.;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005610087.1;locus_tag=JYJ20_RS10580;partial=true;product=ribonuclease G;protein_id=WP_209026223.1;transl_table=11 ##sequence-region NZ_JAFIRP010000034.1 1 28339 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000034.1 RefSeq region 1 28339 . + . ID=NZ_JAFIRP010000034.1:1..28339;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000034.1 RefSeq gene 414 1508 . - . ID=gene-JYJ20_RS10585;Name=JYJ20_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10585 NZ_JAFIRP010000034.1 Protein Homology CDS 414 1508 . - 0 ID=cds-WP_044428352.1;Parent=gene-JYJ20_RS10585;Dbxref=GenBank:WP_044428352.1;Name=WP_044428352.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848300.1;locus_tag=JYJ20_RS10585;product=porin;protein_id=WP_044428352.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 1642 2820 . + . ID=gene-JYJ20_RS10590;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=JYJ20_RS10590 NZ_JAFIRP010000034.1 Protein Homology CDS 1642 2820 . + 0 ID=cds-WP_006248473.1;Parent=gene-JYJ20_RS10590;Dbxref=GenBank:WP_006248473.1;Name=WP_006248473.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248473.1;locus_tag=JYJ20_RS10590;product=lipid-A-disaccharide synthase;protein_id=WP_006248473.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 2847 3899 . + . ID=gene-JYJ20_RS10595;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=JYJ20_RS10595 NZ_JAFIRP010000034.1 Protein Homology CDS 2847 3899 . + 0 ID=cds-WP_006253286.1;Parent=gene-JYJ20_RS10595;Dbxref=GenBank:WP_006253286.1;Name=WP_006253286.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595593.1;locus_tag=JYJ20_RS10595;product=protease SohB;protein_id=WP_006253286.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 3946 4428 . - . ID=gene-JYJ20_RS10600;Name=JYJ20_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10600 NZ_JAFIRP010000034.1 Protein Homology CDS 3946 4428 . - 0 ID=cds-WP_031200889.1;Parent=gene-JYJ20_RS10600;Dbxref=GenBank:WP_031200889.1;Name=WP_031200889.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007523101.1;locus_tag=JYJ20_RS10600;product=redoxin family protein;protein_id=WP_031200889.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 4431 5474 . - . ID=gene-JYJ20_RS10605;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=JYJ20_RS10605 NZ_JAFIRP010000034.1 Protein Homology CDS 4431 5474 . - 0 ID=cds-WP_020830985.1;Parent=gene-JYJ20_RS10605;Dbxref=GenBank:WP_020830985.1;Name=WP_020830985.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012621776.1;locus_tag=JYJ20_RS10605;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_020830985.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 5644 6216 . + . ID=gene-JYJ20_RS10610;Name=JYJ20_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10610 NZ_JAFIRP010000034.1 Protein Homology CDS 5644 6216 . + 0 ID=cds-WP_209026225.1;Parent=gene-JYJ20_RS10610;Dbxref=GenBank:WP_209026225.1;Name=WP_209026225.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248476.1;locus_tag=JYJ20_RS10610;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_209026225.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 6213 6395 . + . ID=gene-JYJ20_RS10615;Name=JYJ20_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10615 NZ_JAFIRP010000034.1 Protein Homology CDS 6213 6395 . + 0 ID=cds-WP_044428218.1;Parent=gene-JYJ20_RS10615;Dbxref=GenBank:WP_044428218.1;Name=WP_044428218.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:NF052368.1;locus_tag=JYJ20_RS10615;product=zf-HC2 domain-containing protein;protein_id=WP_044428218.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 6454 7443 . - . ID=gene-JYJ20_RS10620;Name=JYJ20_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10620 NZ_JAFIRP010000034.1 Protein Homology CDS 6454 7443 . - 0 ID=cds-WP_006248477.1;Parent=gene-JYJ20_RS10620;Dbxref=GenBank:WP_006248477.1;Name=WP_006248477.1;Ontology_term=GO:0015833,GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252599.1;locus_tag=JYJ20_RS10620;product=peptide ABC transporter ATP-binding protein;protein_id=WP_006248477.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 7571 8560 . - . ID=gene-JYJ20_RS10625;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=JYJ20_RS10625 NZ_JAFIRP010000034.1 Protein Homology CDS 7571 8560 . - 0 ID=cds-WP_006248478.1;Parent=gene-JYJ20_RS10625;Dbxref=GenBank:WP_006248478.1;Name=WP_006248478.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251248.1;locus_tag=JYJ20_RS10625;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_006248478.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 8571 9464 . - . ID=gene-JYJ20_RS10630;Name=JYJ20_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10630 NZ_JAFIRP010000034.1 Protein Homology CDS 8571 9464 . - 0 ID=cds-WP_006248479.1;Parent=gene-JYJ20_RS10630;Dbxref=GenBank:WP_006248479.1;Name=WP_006248479.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248479.1;locus_tag=JYJ20_RS10630;product=ABC transporter permease subunit;protein_id=WP_006248479.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 9566 10570 . - . ID=gene-JYJ20_RS10635;Name=JYJ20_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10635 NZ_JAFIRP010000034.1 Protein Homology CDS 9566 10570 . - 0 ID=cds-WP_006248481.1;Parent=gene-JYJ20_RS10635;Dbxref=GenBank:WP_006248481.1;Name=WP_006248481.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005712947.1;locus_tag=JYJ20_RS10635;product=ABC transporter permease subunit;protein_id=WP_006248481.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 10842 12443 . - . ID=gene-JYJ20_RS10640;Name=JYJ20_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10640 NZ_JAFIRP010000034.1 Protein Homology CDS 10842 12443 . - 0 ID=cds-WP_020830984.1;Parent=gene-JYJ20_RS10640;Dbxref=GenBank:WP_020830984.1;Name=WP_020830984.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616566.1;locus_tag=JYJ20_RS10640;product=ABC transporter substrate-binding protein;protein_id=WP_020830984.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 12713 13423 . + . ID=gene-JYJ20_RS10645;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=JYJ20_RS10645 NZ_JAFIRP010000034.1 Protein Homology CDS 12713 13423 . + 0 ID=cds-WP_006248484.1;Parent=gene-JYJ20_RS10645;Dbxref=GenBank:WP_006248484.1;Name=WP_006248484.1;Ontology_term=GO:0032297,GO:0016818;gbkey=CDS;gene=hda;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674467.1;locus_tag=JYJ20_RS10645;product=DnaA regulatory inactivator Hda;protein_id=WP_006248484.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 13567 14208 . + . ID=gene-JYJ20_RS10650;Name=ccmA;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=JYJ20_RS10650 NZ_JAFIRP010000034.1 Protein Homology CDS 13567 14208 . + 0 ID=cds-WP_006248485.1;Parent=gene-JYJ20_RS10650;Dbxref=GenBank:WP_006248485.1;Name=WP_006248485.1;Ontology_term=GO:0017004,GO:0005524,GO:0022857;gbkey=CDS;gene=ccmA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251245.1;locus_tag=JYJ20_RS10650;product=cytochrome c biogenesis heme-transporting ATPase CcmA;protein_id=WP_006248485.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 14205 14867 . + . ID=gene-JYJ20_RS10655;Name=ccmB;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=JYJ20_RS10655 NZ_JAFIRP010000034.1 Protein Homology CDS 14205 14867 . + 0 ID=cds-WP_006248486.1;Parent=gene-JYJ20_RS10655;Dbxref=GenBank:WP_006248486.1;Name=WP_006248486.1;Ontology_term=GO:0015886,GO:0015232;gbkey=CDS;gene=ccmB;go_function=heme transmembrane transporter activity|0015232||IEA;go_process=heme transport|0015886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248486.1;locus_tag=JYJ20_RS10655;product=heme exporter protein CcmB;protein_id=WP_006248486.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 15067 15804 . + . ID=gene-JYJ20_RS10660;Name=JYJ20_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10660 NZ_JAFIRP010000034.1 Protein Homology CDS 15067 15804 . + 0 ID=cds-WP_209026226.1;Parent=gene-JYJ20_RS10660;Dbxref=GenBank:WP_209026226.1;Name=WP_209026226.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248487.1;locus_tag=JYJ20_RS10660;product=heme ABC transporter permease;protein_id=WP_209026226.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 15819 16016 . + . ID=gene-JYJ20_RS10665;Name=ccmD;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=JYJ20_RS10665 NZ_JAFIRP010000034.1 Protein Homology CDS 15819 16016 . + 0 ID=cds-WP_006248488.1;Parent=gene-JYJ20_RS10665;Dbxref=GenBank:WP_006248488.1;Name=WP_006248488.1;Ontology_term=GO:0015886,GO:0017004,GO:0016020;gbkey=CDS;gene=ccmD;go_component=membrane|0016020||IEA;go_process=heme transport|0015886||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248488.1;locus_tag=JYJ20_RS10665;product=heme exporter protein CcmD;protein_id=WP_006248488.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 16202 16759 . + . ID=gene-JYJ20_RS10670;Name=ccmE;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=JYJ20_RS10670 NZ_JAFIRP010000034.1 Protein Homology CDS 16202 16759 . + 0 ID=cds-WP_006251244.1;Parent=gene-JYJ20_RS10670;Dbxref=GenBank:WP_006251244.1;Name=WP_006251244.1;Ontology_term=GO:0017004,GO:0020037,GO:0005886;gbkey=CDS;gene=ccmE;go_component=plasma membrane|0005886||IEA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601970.1;locus_tag=JYJ20_RS10670;product=cytochrome c maturation protein CcmE;protein_id=WP_006251244.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 16756 18714 . + . ID=gene-JYJ20_RS10675;Name=JYJ20_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10675 NZ_JAFIRP010000034.1 Protein Homology CDS 16756 18714 . + 0 ID=cds-WP_006248491.1;Parent=gene-JYJ20_RS10675;Dbxref=GenBank:WP_006248491.1;Name=WP_006248491.1;Ontology_term=GO:0017004,GO:0015232,GO:0020037,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=heme transmembrane transporter activity|0015232||IEA,heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248491.1;locus_tag=JYJ20_RS10675;product=heme lyase CcmF/NrfE family subunit;protein_id=WP_006248491.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 18761 19378 . - . ID=gene-JYJ20_RS10680;Name=JYJ20_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10680 NZ_JAFIRP010000034.1 Protein Homology CDS 18761 19378 . - 0 ID=cds-WP_006248492.1;Parent=gene-JYJ20_RS10680;Dbxref=GenBank:WP_006248492.1;Name=WP_006248492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603203.1;locus_tag=JYJ20_RS10680;product=HI_0552 family protein;protein_id=WP_006248492.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 19463 20629 . - . ID=gene-JYJ20_RS10685;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=JYJ20_RS10685 NZ_JAFIRP010000034.1 Protein Homology CDS 19463 20629 . - 0 ID=cds-WP_006248493.1;Parent=gene-JYJ20_RS10685;Dbxref=GenBank:WP_006248493.1;Name=WP_006248493.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248493.1;locus_tag=JYJ20_RS10685;product=Obg family GTPase CgtA;protein_id=WP_006248493.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 20819 22546 . - . ID=gene-JYJ20_RS10690;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=JYJ20_RS10690 NZ_JAFIRP010000034.1 Protein Homology CDS 20819 22546 . - 0 ID=cds-WP_006248494.1;Parent=gene-JYJ20_RS10690;Dbxref=GenBank:WP_006248494.1;Name=WP_006248494.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011200504.1;locus_tag=JYJ20_RS10690;product=arginine--tRNA ligase;protein_id=WP_006248494.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 22580 23179 . + . ID=gene-JYJ20_RS10695;Name=JYJ20_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10695 NZ_JAFIRP010000034.1 Protein Homology CDS 22580 23179 . + 0 ID=cds-WP_015484031.1;Parent=gene-JYJ20_RS10695;Dbxref=GenBank:WP_015484031.1;Name=WP_015484031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484031.1;locus_tag=JYJ20_RS10695;product=VOC family protein;protein_id=WP_015484031.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 23200 23664 . + . ID=gene-JYJ20_RS10700;Name=JYJ20_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10700 NZ_JAFIRP010000034.1 Protein Homology CDS 23200 23664 . + 0 ID=cds-WP_209026227.1;Parent=gene-JYJ20_RS10700;Dbxref=GenBank:WP_209026227.1;Name=WP_209026227.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014992099.1;locus_tag=JYJ20_RS10700;product=outer membrane lipoprotein;protein_id=WP_209026227.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq pseudogene 23695 23968 . + . ID=gene-JYJ20_RS10705;Name=JYJ20_RS10705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS10705;pseudo=true NZ_JAFIRP010000034.1 Protein Homology CDS 23695 23968 . + 0 ID=cds-JYJ20_RS10705;Parent=gene-JYJ20_RS10705;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599987.1;locus_tag=JYJ20_RS10705;product=deoxyribose-phosphate aldolase;pseudo=true;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 24030 24980 . - . ID=gene-JYJ20_RS10710;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=JYJ20_RS10710 NZ_JAFIRP010000034.1 Protein Homology CDS 24030 24980 . - 0 ID=cds-WP_006248499.1;Parent=gene-JYJ20_RS10710;Dbxref=GenBank:WP_006248499.1;Name=WP_006248499.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248499.1;locus_tag=JYJ20_RS10710;product=transaldolase;protein_id=WP_006248499.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 25129 25701 . - . ID=gene-JYJ20_RS10715;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;locus_tag=JYJ20_RS10715 NZ_JAFIRP010000034.1 Protein Homology CDS 25129 25701 . - 0 ID=cds-WP_006248501.1;Parent=gene-JYJ20_RS10715;Dbxref=GenBank:WP_006248501.1;Name=WP_006248501.1;Ontology_term=GO:0042823,GO:0004359,GO:0016884;gbkey=CDS;gene=pdxT;go_function=glutaminase activity|0004359||IEA,carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248501.1;locus_tag=JYJ20_RS10715;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=WP_006248501.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 25701 26573 . - . ID=gene-JYJ20_RS10720;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=JYJ20_RS10720 NZ_JAFIRP010000034.1 Protein Homology CDS 25701 26573 . - 0 ID=cds-WP_006248502.1;Parent=gene-JYJ20_RS10720;Dbxref=GenBank:WP_006248502.1;Name=WP_006248502.1;Ontology_term=GO:0042823,GO:0003824;gbkey=CDS;gene=pdxS;go_function=catalytic activity|0003824||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248502.1;locus_tag=JYJ20_RS10720;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=WP_006248502.1;transl_table=11 NZ_JAFIRP010000034.1 RefSeq gene 26760 28187 . + . ID=gene-JYJ20_RS10725;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=JYJ20_RS10725 NZ_JAFIRP010000034.1 Protein Homology CDS 26760 28187 . + 0 ID=cds-WP_006253379.1;Parent=gene-JYJ20_RS10725;Dbxref=GenBank:WP_006253379.1;Name=WP_006253379.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253379.1;locus_tag=JYJ20_RS10725;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_006253379.1;transl_table=11 ##sequence-region NZ_JAFIRP010000035.1 1 50111 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000035.1 RefSeq region 1 50111 . + . ID=NZ_JAFIRP010000035.1:1..50111;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000035.1 RefSeq pseudogene 22 171 . + . ID=gene-JYJ20_RS12260;Name=JYJ20_RS12260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS12260;partial=true;pseudo=true;start_range=.,22 NZ_JAFIRP010000035.1 Protein Homology CDS 22 171 . + 0 ID=cds-JYJ20_RS12260;Parent=gene-JYJ20_RS12260;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249027.1;locus_tag=JYJ20_RS12260;partial=true;product=dethiobiotin synthase;pseudo=true;start_range=.,22;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 220 429 . - . ID=gene-JYJ20_RS10730;Name=JYJ20_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10730 NZ_JAFIRP010000035.1 Protein Homology CDS 220 429 . - 0 ID=cds-WP_006249028.1;Parent=gene-JYJ20_RS10730;Dbxref=GenBank:WP_006249028.1;Name=WP_006249028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249028.1;locus_tag=JYJ20_RS10730;product=alternative ribosome-rescue factor A;protein_id=WP_006249028.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 581 1336 . + . ID=gene-JYJ20_RS10735;Name=JYJ20_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10735 NZ_JAFIRP010000035.1 Protein Homology CDS 581 1336 . + 0 ID=cds-WP_006249029.1;Parent=gene-JYJ20_RS10735;Dbxref=GenBank:WP_006249029.1;Name=WP_006249029.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874881.1;locus_tag=JYJ20_RS10735;product=class I SAM-dependent methyltransferase;protein_id=WP_006249029.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 1367 2443 . + . ID=gene-JYJ20_RS10740;Name=JYJ20_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10740 NZ_JAFIRP010000035.1 Protein Homology CDS 1367 2443 . + 0 ID=cds-WP_006249030.1;Parent=gene-JYJ20_RS10740;Dbxref=GenBank:WP_006249030.1;Name=WP_006249030.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249030.1;locus_tag=JYJ20_RS10740;product=AI-2E family transporter;protein_id=WP_006249030.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 2457 3395 . + . ID=gene-JYJ20_RS10745;Name=JYJ20_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10745 NZ_JAFIRP010000035.1 Protein Homology CDS 2457 3395 . + 0 ID=cds-WP_209026228.1;Parent=gene-JYJ20_RS10745;Dbxref=GenBank:WP_209026228.1;Name=WP_209026228.1;Ontology_term=GO:0043743,GO:0051287;gbkey=CDS;go_function=LPPG:FO 2-phospho-L-lactate transferase activity|0043743||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249031.1;locus_tag=JYJ20_RS10745;product=gluconeogenesis factor YvcK family protein;protein_id=WP_209026228.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 3445 6051 . - . ID=gene-JYJ20_RS10750;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=JYJ20_RS10750 NZ_JAFIRP010000035.1 Protein Homology CDS 3445 6051 . - 0 ID=cds-WP_209026229.1;Parent=gene-JYJ20_RS10750;Dbxref=GenBank:WP_209026229.1;Name=WP_209026229.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651935.1;locus_tag=JYJ20_RS10750;product=type I DNA topoisomerase;protein_id=WP_209026229.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 6181 7071 . + . ID=gene-JYJ20_RS10755;Name=JYJ20_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10755 NZ_JAFIRP010000035.1 Protein Homology CDS 6181 7071 . + 0 ID=cds-WP_209026230.1;Parent=gene-JYJ20_RS10755;Dbxref=GenBank:WP_209026230.1;Name=WP_209026230.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249033.1;locus_tag=JYJ20_RS10755;product=LysR family transcriptional regulator;protein_id=WP_209026230.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 7121 7381 . - . ID=gene-JYJ20_RS10760;Name=JYJ20_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10760 NZ_JAFIRP010000035.1 Protein Homology CDS 7121 7381 . - 0 ID=cds-WP_006249034.1;Parent=gene-JYJ20_RS10760;Dbxref=GenBank:WP_006249034.1;Name=WP_006249034.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251053.1;locus_tag=JYJ20_RS10760;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_006249034.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 7461 8420 . - . ID=gene-JYJ20_RS10765;Name=JYJ20_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10765 NZ_JAFIRP010000035.1 Protein Homology CDS 7461 8420 . - 0 ID=cds-WP_006249035.1;Parent=gene-JYJ20_RS10765;Dbxref=GenBank:WP_006249035.1;Name=WP_006249035.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249035.1;locus_tag=JYJ20_RS10765;product=ABC transporter substrate-binding protein;protein_id=WP_006249035.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 8617 9024 . - . ID=gene-JYJ20_RS10770;Name=JYJ20_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10770 NZ_JAFIRP010000035.1 Protein Homology CDS 8617 9024 . - 0 ID=cds-WP_006251052.1;Parent=gene-JYJ20_RS10770;Dbxref=GenBank:WP_006251052.1;Name=WP_006251052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604075.1;locus_tag=JYJ20_RS10770;product=ClpXP protease specificity-enhancing factor;protein_id=WP_006251052.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 9024 9668 . - . ID=gene-JYJ20_RS10775;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=JYJ20_RS10775 NZ_JAFIRP010000035.1 Protein Homology CDS 9024 9668 . - 0 ID=cds-WP_006249369.1;Parent=gene-JYJ20_RS10775;Dbxref=GenBank:WP_006249369.1;Name=WP_006249369.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874695.1;locus_tag=JYJ20_RS10775;product=stringent starvation protein SspA;protein_id=WP_006249369.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 9842 10339 . + . ID=gene-JYJ20_RS10780;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=JYJ20_RS10780 NZ_JAFIRP010000035.1 Protein Homology CDS 9842 10339 . + 0 ID=cds-WP_006249370.1;Parent=gene-JYJ20_RS10780;Dbxref=GenBank:WP_006249370.1;Name=WP_006249370.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249370.1;locus_tag=JYJ20_RS10780;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_006249370.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 10354 11319 . + . ID=gene-JYJ20_RS10785;Name=JYJ20_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10785 NZ_JAFIRP010000035.1 Protein Homology CDS 10354 11319 . + 0 ID=cds-WP_015484189.1;Parent=gene-JYJ20_RS10785;Dbxref=GenBank:WP_015484189.1;Name=WP_015484189.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607504.1;locus_tag=JYJ20_RS10785;product=asparaginase;protein_id=WP_015484189.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 11338 12426 . + . ID=gene-JYJ20_RS10790;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=JYJ20_RS10790 NZ_JAFIRP010000035.1 Protein Homology CDS 11338 12426 . + 0 ID=cds-WP_006249372.1;Parent=gene-JYJ20_RS10790;Dbxref=GenBank:WP_006249372.1;Name=WP_006249372.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262901.1;locus_tag=JYJ20_RS10790;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_006249372.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 12647 13057 . - . ID=gene-JYJ20_RS10795;Name=JYJ20_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10795 NZ_JAFIRP010000035.1 Protein Homology CDS 12647 13057 . - 0 ID=cds-WP_006249373.1;Parent=gene-JYJ20_RS10795;Dbxref=GenBank:WP_006249373.1;Name=WP_006249373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249373.1;locus_tag=JYJ20_RS10795;product=hypothetical protein;protein_id=WP_006249373.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 13060 15078 . - . ID=gene-JYJ20_RS10800;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=JYJ20_RS10800 NZ_JAFIRP010000035.1 Protein Homology CDS 13060 15078 . - 0 ID=cds-WP_006249374.1;Parent=gene-JYJ20_RS10800;Dbxref=GenBank:WP_006249374.1;Name=WP_006249374.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874701.1;locus_tag=JYJ20_RS10800;product=excinuclease ABC subunit UvrB;protein_id=WP_006249374.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 15317 15553 . - . ID=gene-JYJ20_RS10805;Name=JYJ20_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10805 NZ_JAFIRP010000035.1 Protein Homology CDS 15317 15553 . - 0 ID=cds-WP_006249376.1;Parent=gene-JYJ20_RS10805;Dbxref=GenBank:WP_006249376.1;Name=WP_006249376.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249376.1;locus_tag=JYJ20_RS10805;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_006249376.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 15791 16561 . + . ID=gene-JYJ20_RS10810;Name=efeO;gbkey=Gene;gene=efeO;gene_biotype=protein_coding;locus_tag=JYJ20_RS10810 NZ_JAFIRP010000035.1 Protein Homology CDS 15791 16561 . + 0 ID=cds-WP_015484187.1;Parent=gene-JYJ20_RS10810;Dbxref=GenBank:WP_015484187.1;Name=WP_015484187.1;Ontology_term=GO:0006826;gbkey=CDS;gene=efeO;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013745726.1;locus_tag=JYJ20_RS10810;product=iron uptake system protein EfeO;protein_id=WP_015484187.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 16572 17768 . + . ID=gene-JYJ20_RS10815;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=JYJ20_RS10815 NZ_JAFIRP010000035.1 Protein Homology CDS 16572 17768 . + 0 ID=cds-WP_209026231.1;Parent=gene-JYJ20_RS10815;Dbxref=GenBank:WP_209026231.1;Name=WP_209026231.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614931.1;locus_tag=JYJ20_RS10815;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WP_209026231.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 17779 18129 . + . ID=gene-JYJ20_RS12265;Name=JYJ20_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12265 NZ_JAFIRP010000035.1 Protein Homology CDS 17779 18129 . + 0 ID=cds-WP_015484185.1;Parent=gene-JYJ20_RS12265;Dbxref=GenBank:WP_015484185.1;Name=WP_015484185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484185.1;locus_tag=JYJ20_RS12265;product=hypothetical protein;protein_id=WP_015484185.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 18126 18398 . + . ID=gene-JYJ20_RS12270;Name=JYJ20_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12270 NZ_JAFIRP010000035.1 Protein Homology CDS 18126 18398 . + 0 ID=cds-WP_015484184.1;Parent=gene-JYJ20_RS12270;Dbxref=GenBank:WP_015484184.1;Name=WP_015484184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622706.1;locus_tag=JYJ20_RS12270;product=hypothetical protein;protein_id=WP_015484184.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 18434 19252 . - . ID=gene-JYJ20_RS10825;Name=JYJ20_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10825 NZ_JAFIRP010000035.1 Protein Homology CDS 18434 19252 . - 0 ID=cds-WP_006249382.1;Parent=gene-JYJ20_RS10825;Dbxref=GenBank:WP_006249382.1;Name=WP_006249382.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596978.1;locus_tag=JYJ20_RS10825;product=PHP domain-containing protein;protein_id=WP_006249382.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 19264 19863 . - . ID=gene-JYJ20_RS10830;Name=JYJ20_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10830 NZ_JAFIRP010000035.1 Protein Homology CDS 19264 19863 . - 0 ID=cds-WP_006249381.1;Parent=gene-JYJ20_RS10830;Dbxref=GenBank:WP_006249381.1;Name=WP_006249381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249381.1;locus_tag=JYJ20_RS10830;product=hypothetical protein;protein_id=WP_006249381.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 19860 21407 . - . ID=gene-JYJ20_RS10835;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=JYJ20_RS10835 NZ_JAFIRP010000035.1 Protein Homology CDS 19860 21407 . - 0 ID=cds-WP_006249380.1;Parent=gene-JYJ20_RS10835;Dbxref=GenBank:WP_006249380.1;Name=WP_006249380.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249380.1;locus_tag=JYJ20_RS10835;product=exodeoxyribonuclease I;protein_id=WP_006249380.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 21809 23212 . + . ID=gene-JYJ20_RS10840;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=JYJ20_RS10840 NZ_JAFIRP010000035.1 Protein Homology CDS 21809 23212 . + 0 ID=cds-WP_006249379.1;Parent=gene-JYJ20_RS10840;Dbxref=GenBank:WP_006249379.1;Name=WP_006249379.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011608909.1;locus_tag=JYJ20_RS10840;product=asparagine--tRNA ligase;protein_id=WP_006249379.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 23312 24304 . - . ID=gene-JYJ20_RS10845;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=JYJ20_RS10845 NZ_JAFIRP010000035.1 Protein Homology CDS 23312 24304 . - 0 ID=cds-WP_209026232.1;Parent=gene-JYJ20_RS10845;Dbxref=GenBank:WP_209026232.1;Name=WP_209026232.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604135.1;locus_tag=JYJ20_RS10845;product=EF-P beta-lysylation protein EpmB;protein_id=WP_209026232.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 24358 24927 . - . ID=gene-JYJ20_RS10850;Name=JYJ20_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10850 NZ_JAFIRP010000035.1 Protein Homology CDS 24358 24927 . - 0 ID=cds-WP_006253558.1;Parent=gene-JYJ20_RS10850;Dbxref=GenBank:WP_006253558.1;Name=WP_006253558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253558.1;locus_tag=JYJ20_RS10850;product=hypothetical protein;protein_id=WP_006253558.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 25094 25660 . + . ID=gene-JYJ20_RS10855;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=JYJ20_RS10855 NZ_JAFIRP010000035.1 Protein Homology CDS 25094 25660 . + 0 ID=cds-WP_006250738.1;Parent=gene-JYJ20_RS10855;Dbxref=GenBank:WP_006250738.1;Name=WP_006250738.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005635150.1;locus_tag=JYJ20_RS10855;product=elongation factor P;protein_id=WP_006250738.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 25727 26617 . - . ID=gene-JYJ20_RS10860;Name=JYJ20_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10860 NZ_JAFIRP010000035.1 Protein Homology CDS 25727 26617 . - 0 ID=cds-WP_006250739.1;Parent=gene-JYJ20_RS10860;Dbxref=GenBank:WP_006250739.1;Name=WP_006250739.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252608.1;locus_tag=JYJ20_RS10860;product=LysR family transcriptional regulator;protein_id=WP_006250739.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 26724 27299 . + . ID=gene-JYJ20_RS10865;Name=JYJ20_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10865 NZ_JAFIRP010000035.1 Protein Homology CDS 26724 27299 . + 0 ID=cds-WP_006250301.1;Parent=gene-JYJ20_RS10865;Dbxref=GenBank:WP_006250301.1;Name=WP_006250301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250301.1;locus_tag=JYJ20_RS10865;product=NAD(P)H-binding protein;protein_id=WP_006250301.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 27350 27793 . + . ID=gene-JYJ20_RS10870;Name=JYJ20_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10870 NZ_JAFIRP010000035.1 Protein Homology CDS 27350 27793 . + 0 ID=cds-WP_006250302.1;Parent=gene-JYJ20_RS10870;Dbxref=GenBank:WP_006250302.1;Name=WP_006250302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250740.1;locus_tag=JYJ20_RS10870;product=nuclear transport factor 2 family protein;protein_id=WP_006250302.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 27954 29624 . + . ID=gene-JYJ20_RS10875;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=JYJ20_RS10875 NZ_JAFIRP010000035.1 Protein Homology CDS 27954 29624 . + 0 ID=cds-WP_006250304.1;Parent=gene-JYJ20_RS10875;Dbxref=GenBank:WP_006250304.1;Name=WP_006250304.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250741.1;locus_tag=JYJ20_RS10875;product=glutamine--tRNA ligase;protein_id=WP_006250304.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 29891 30856 . - . ID=gene-JYJ20_RS10880;Name=JYJ20_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10880 NZ_JAFIRP010000035.1 Protein Homology CDS 29891 30856 . - 0 ID=cds-WP_006253559.1;Parent=gene-JYJ20_RS10880;Dbxref=GenBank:WP_006253559.1;Name=WP_006253559.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253559.1;locus_tag=JYJ20_RS10880;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_006253559.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 31018 32358 . - . ID=gene-JYJ20_RS10885;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=JYJ20_RS10885 NZ_JAFIRP010000035.1 Protein Homology CDS 31018 32358 . - 0 ID=cds-WP_006250748.1;Parent=gene-JYJ20_RS10885;Dbxref=GenBank:WP_006250748.1;Name=WP_006250748.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616859.1;locus_tag=JYJ20_RS10885;product=NADP-specific glutamate dehydrogenase;protein_id=WP_006250748.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 32551 32892 . - . ID=gene-JYJ20_RS10890;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=JYJ20_RS10890 NZ_JAFIRP010000035.1 Protein Homology CDS 32551 32892 . - 0 ID=cds-WP_006249037.1;Parent=gene-JYJ20_RS10890;Dbxref=GenBank:WP_006249037.1;Name=WP_006249037.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249037.1;locus_tag=JYJ20_RS10890;product=outer membrane protein assembly factor BamE;protein_id=WP_006249037.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 32959 33960 . - . ID=gene-JYJ20_RS10895;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=JYJ20_RS10895 NZ_JAFIRP010000035.1 Protein Homology CDS 32959 33960 . - 0 ID=cds-WP_006249038.1;Parent=gene-JYJ20_RS10895;Dbxref=GenBank:WP_006249038.1;Name=WP_006249038.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005623453.1;locus_tag=JYJ20_RS10895;product=nucleoid-associated protein YejK;protein_id=WP_006249038.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 34041 34427 . + . ID=gene-JYJ20_RS10900;Name=JYJ20_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10900 NZ_JAFIRP010000035.1 Protein Homology CDS 34041 34427 . + 0 ID=cds-WP_006249039.1;Parent=gene-JYJ20_RS10900;Dbxref=GenBank:WP_006249039.1;Name=WP_006249039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249039.1;locus_tag=JYJ20_RS10900;product=RidA family protein;protein_id=WP_006249039.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 34459 35196 . + . ID=gene-JYJ20_RS10905;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=JYJ20_RS10905 NZ_JAFIRP010000035.1 Protein Homology CDS 34459 35196 . + 0 ID=cds-WP_134916665.1;Parent=gene-JYJ20_RS10905;Dbxref=GenBank:WP_134916665.1;Name=WP_134916665.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616864.1;locus_tag=JYJ20_RS10905;product=peptidoglycan editing factor PgeF;protein_id=WP_134916665.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 35290 35365 . + . ID=gene-JYJ20_RS10910;Name=JYJ20_RS10910;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS10910 NZ_JAFIRP010000035.1 tRNAscan-SE tRNA 35290 35365 . + . ID=rna-JYJ20_RS10910;Parent=gene-JYJ20_RS10910;anticodon=(pos:35323..35325);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS10910;product=tRNA-Ile NZ_JAFIRP010000035.1 tRNAscan-SE exon 35290 35365 . + . ID=exon-JYJ20_RS10910-1;Parent=rna-JYJ20_RS10910;anticodon=(pos:35323..35325);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS10910;product=tRNA-Ile NZ_JAFIRP010000035.1 RefSeq gene 35568 36782 . + . ID=gene-JYJ20_RS10915;Name=JYJ20_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10915 NZ_JAFIRP010000035.1 Protein Homology CDS 35568 36782 . + 0 ID=cds-WP_209026233.1;Parent=gene-JYJ20_RS10915;Dbxref=GenBank:WP_209026233.1;Name=WP_209026233.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250224.1;locus_tag=JYJ20_RS10915;product=tyrosine-type recombinase/integrase;protein_id=WP_209026233.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 37251 37457 . + . ID=gene-JYJ20_RS10920;Name=JYJ20_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10920 NZ_JAFIRP010000035.1 Protein Homology CDS 37251 37457 . + 0 ID=cds-WP_021280199.1;Parent=gene-JYJ20_RS10920;Dbxref=GenBank:WP_021280199.1;Name=WP_021280199.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250227.1;locus_tag=JYJ20_RS10920;product=helix-turn-helix transcriptional regulator;protein_id=WP_021280199.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 37467 38126 . + . ID=gene-JYJ20_RS10925;Name=JYJ20_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10925 NZ_JAFIRP010000035.1 Protein Homology CDS 37467 38126 . + 0 ID=cds-WP_209026234.1;Parent=gene-JYJ20_RS10925;Dbxref=GenBank:WP_209026234.1;Name=WP_209026234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250228.1;locus_tag=JYJ20_RS10925;product=hypothetical protein;protein_id=WP_209026234.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 38137 39087 . + . ID=gene-JYJ20_RS10930;Name=JYJ20_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10930 NZ_JAFIRP010000035.1 Protein Homology CDS 38137 39087 . + 0 ID=cds-WP_209026235.1;Parent=gene-JYJ20_RS10930;Dbxref=GenBank:WP_209026235.1;Name=WP_209026235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250229.1;locus_tag=JYJ20_RS10930;product=P2 family phage major capsid protein;protein_id=WP_209026235.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 39084 39278 . + . ID=gene-JYJ20_RS10935;Name=JYJ20_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10935 NZ_JAFIRP010000035.1 Protein Homology CDS 39084 39278 . + 0 ID=cds-WP_209026236.1;Parent=gene-JYJ20_RS10935;Dbxref=GenBank:WP_209026236.1;Name=WP_209026236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250230.1;locus_tag=JYJ20_RS10935;product=hypothetical protein;protein_id=WP_209026236.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 39395 40621 . + . ID=gene-JYJ20_RS10940;Name=JYJ20_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10940 NZ_JAFIRP010000035.1 GeneMarkS-2+ CDS 39395 40621 . + 0 ID=cds-WP_209026237.1;Parent=gene-JYJ20_RS10940;Dbxref=GenBank:WP_209026237.1;Name=WP_209026237.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS10940;product=hypothetical protein;protein_id=WP_209026237.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 40784 40975 . + . ID=gene-JYJ20_RS10945;Name=JYJ20_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10945 NZ_JAFIRP010000035.1 Protein Homology CDS 40784 40975 . + 0 ID=cds-WP_209026238.1;Parent=gene-JYJ20_RS10945;Dbxref=GenBank:WP_209026238.1;Name=WP_209026238.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253560.1;locus_tag=JYJ20_RS10945;product=helix-turn-helix transcriptional regulator;protein_id=WP_209026238.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 40975 41355 . + . ID=gene-JYJ20_RS10950;Name=JYJ20_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10950 NZ_JAFIRP010000035.1 Protein Homology CDS 40975 41355 . + 0 ID=cds-WP_209026239.1;Parent=gene-JYJ20_RS10950;Dbxref=GenBank:WP_209026239.1;Name=WP_209026239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250233.1;locus_tag=JYJ20_RS10950;product=transcriptional regulator;protein_id=WP_209026239.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 41741 42337 . + . ID=gene-JYJ20_RS10955;Name=JYJ20_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10955 NZ_JAFIRP010000035.1 Protein Homology CDS 41741 42337 . + 0 ID=cds-WP_209026240.1;Parent=gene-JYJ20_RS10955;Dbxref=GenBank:WP_209026240.1;Name=WP_209026240.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022029.7;locus_tag=JYJ20_RS10955;product=ash family protein;protein_id=WP_209026240.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 42330 42494 . + . ID=gene-JYJ20_RS10960;Name=JYJ20_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10960 NZ_JAFIRP010000035.1 Protein Homology CDS 42330 42494 . + 0 ID=cds-WP_006252893.1;Parent=gene-JYJ20_RS10960;Dbxref=GenBank:WP_006252893.1;Name=WP_006252893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252893.1;locus_tag=JYJ20_RS10960;product=hypothetical protein;protein_id=WP_006252893.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 42487 43128 . + . ID=gene-JYJ20_RS10965;Name=JYJ20_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10965 NZ_JAFIRP010000035.1 Protein Homology CDS 42487 43128 . + 0 ID=cds-WP_209026241.1;Parent=gene-JYJ20_RS10965;Dbxref=GenBank:WP_209026241.1;Name=WP_209026241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250237.1;locus_tag=JYJ20_RS10965;product=hypothetical protein;protein_id=WP_209026241.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 43115 43309 . + . ID=gene-JYJ20_RS10970;Name=JYJ20_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10970 NZ_JAFIRP010000035.1 GeneMarkS-2+ CDS 43115 43309 . + 0 ID=cds-WP_209026242.1;Parent=gene-JYJ20_RS10970;Dbxref=GenBank:WP_209026242.1;Name=WP_209026242.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS10970;product=hypothetical protein;protein_id=WP_209026242.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 43378 45561 . + . ID=gene-JYJ20_RS10975;Name=JYJ20_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10975 NZ_JAFIRP010000035.1 Protein Homology CDS 43378 45561 . + 0 ID=cds-WP_209026243.1;Parent=gene-JYJ20_RS10975;Dbxref=GenBank:WP_209026243.1;Name=WP_209026243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014667881.1;locus_tag=JYJ20_RS10975;product=DUF927 domain-containing protein;protein_id=WP_209026243.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 46440 47657 . + . ID=gene-JYJ20_RS12275;Name=JYJ20_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12275 NZ_JAFIRP010000035.1 Protein Homology CDS 46440 47657 . + 0 ID=cds-WP_245155420.1;Parent=gene-JYJ20_RS12275;Dbxref=GenBank:WP_245155420.1;Name=WP_245155420.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991314.1;locus_tag=JYJ20_RS12275;product=tyrosine-type recombinase/integrase;protein_id=WP_245155420.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 47707 47997 . + . ID=gene-JYJ20_RS10990;Name=JYJ20_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS10990 NZ_JAFIRP010000035.1 Protein Homology CDS 47707 47997 . + 0 ID=cds-WP_006250240.1;Parent=gene-JYJ20_RS10990;Dbxref=GenBank:WP_006250240.1;Name=WP_006250240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250240.1;locus_tag=JYJ20_RS10990;product=hypothetical protein;protein_id=WP_006250240.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq pseudogene 48611 48892 . + . ID=gene-JYJ20_RS10995;Name=JYJ20_RS10995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS10995;partial=true;pseudo=true;start_range=.,48611 NZ_JAFIRP010000035.1 Protein Homology CDS 48611 48892 . + 0 ID=cds-JYJ20_RS10995;Parent=gene-JYJ20_RS10995;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008219,GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;go_process=cell death|0008219||IEA;inference=COORDINATES: protein motif:HMM:TIGR02683.1;locus_tag=JYJ20_RS10995;partial=true;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;start_range=.,48611;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 48870 49193 . + . ID=gene-JYJ20_RS11000;Name=JYJ20_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11000 NZ_JAFIRP010000035.1 Protein Homology CDS 48870 49193 . + 0 ID=cds-WP_006250242.1;Parent=gene-JYJ20_RS11000;Dbxref=GenBank:WP_006250242.1;Name=WP_006250242.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250284.1;locus_tag=JYJ20_RS11000;product=addiction module antidote protein;protein_id=WP_006250242.1;transl_table=11 NZ_JAFIRP010000035.1 RefSeq gene 49760 50008 . + . ID=gene-JYJ20_RS11005;Name=JYJ20_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11005 NZ_JAFIRP010000035.1 Protein Homology CDS 49760 50008 . + 0 ID=cds-WP_006250244.1;Parent=gene-JYJ20_RS11005;Dbxref=GenBank:WP_006250244.1;Name=WP_006250244.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250244.1;locus_tag=JYJ20_RS11005;product=Arm DNA-binding domain-containing protein;protein_id=WP_006250244.1;transl_table=11 ##sequence-region NZ_JAFIRP010000036.1 1 58431 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000036.1 RefSeq region 1 58431 . + . ID=NZ_JAFIRP010000036.1:1..58431;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000036.1 RefSeq gene 104 412 . - . ID=gene-JYJ20_RS11010;Name=JYJ20_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11010 NZ_JAFIRP010000036.1 Protein Homology CDS 104 412 . - 0 ID=cds-WP_209026244.1;Parent=gene-JYJ20_RS11010;Dbxref=GenBank:WP_209026244.1;Name=WP_209026244.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484769.1;locus_tag=JYJ20_RS11010;product=helix-turn-helix domain-containing protein;protein_id=WP_209026244.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 421 753 . - . ID=gene-JYJ20_RS11015;Name=JYJ20_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11015 NZ_JAFIRP010000036.1 Protein Homology CDS 421 753 . - 0 ID=cds-WP_015484768.1;Parent=gene-JYJ20_RS11015;Dbxref=GenBank:WP_015484768.1;Name=WP_015484768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484768.1;locus_tag=JYJ20_RS11015;product=hypothetical protein;protein_id=WP_015484768.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 878 2617 . - . ID=gene-JYJ20_RS11020;Name=JYJ20_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11020 NZ_JAFIRP010000036.1 Protein Homology CDS 878 2617 . - 0 ID=cds-WP_209026245.1;Parent=gene-JYJ20_RS11020;Dbxref=GenBank:WP_209026245.1;Name=WP_209026245.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01613.1;locus_tag=JYJ20_RS11020;product=DNA primase family protein;protein_id=WP_209026245.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 2614 2958 . - . ID=gene-JYJ20_RS11025;Name=JYJ20_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11025 NZ_JAFIRP010000036.1 GeneMarkS-2+ CDS 2614 2958 . - 0 ID=cds-WP_209026246.1;Parent=gene-JYJ20_RS11025;Dbxref=GenBank:WP_209026246.1;Name=WP_209026246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS11025;product=hypothetical protein;protein_id=WP_209026246.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 2951 3298 . - . ID=gene-JYJ20_RS11030;Name=JYJ20_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11030 NZ_JAFIRP010000036.1 GeneMarkS-2+ CDS 2951 3298 . - 0 ID=cds-WP_209026247.1;Parent=gene-JYJ20_RS11030;Dbxref=GenBank:WP_209026247.1;Name=WP_209026247.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS11030;product=hypothetical protein;protein_id=WP_209026247.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 3291 3560 . - . ID=gene-JYJ20_RS11035;Name=JYJ20_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11035 NZ_JAFIRP010000036.1 GeneMarkS-2+ CDS 3291 3560 . - 0 ID=cds-WP_245155421.1;Parent=gene-JYJ20_RS11035;Dbxref=GenBank:WP_245155421.1;Name=WP_245155421.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS11035;product=hypothetical protein;protein_id=WP_245155421.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 3571 3771 . - . ID=gene-JYJ20_RS11040;Name=JYJ20_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11040 NZ_JAFIRP010000036.1 GeneMarkS-2+ CDS 3571 3771 . - 0 ID=cds-WP_209026248.1;Parent=gene-JYJ20_RS11040;Dbxref=GenBank:WP_209026248.1;Name=WP_209026248.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS11040;product=hypothetical protein;protein_id=WP_209026248.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 3764 4405 . - . ID=gene-JYJ20_RS11045;Name=JYJ20_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11045 NZ_JAFIRP010000036.1 Protein Homology CDS 3764 4405 . - 0 ID=cds-WP_209026249.1;Parent=gene-JYJ20_RS11045;Dbxref=GenBank:WP_209026249.1;Name=WP_209026249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651536.1;locus_tag=JYJ20_RS11045;product=ash family protein;protein_id=WP_209026249.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 4551 4829 . - . ID=gene-JYJ20_RS11050;Name=JYJ20_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11050 NZ_JAFIRP010000036.1 Protein Homology CDS 4551 4829 . - 0 ID=cds-WP_021280439.1;Parent=gene-JYJ20_RS11050;Dbxref=GenBank:WP_021280439.1;Name=WP_021280439.1;Ontology_term=GO:0051276;gbkey=CDS;go_process=chromosome organization|0051276||IEA;inference=COORDINATES: protein motif:HMM:NF015550.7;locus_tag=JYJ20_RS11050;product=terminase small subunit;protein_id=WP_021280439.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 4832 5587 . - . ID=gene-JYJ20_RS11055;Name=JYJ20_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11055 NZ_JAFIRP010000036.1 Protein Homology CDS 4832 5587 . - 0 ID=cds-WP_209026250.1;Parent=gene-JYJ20_RS11055;Dbxref=GenBank:WP_209026250.1;Name=WP_209026250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005702030.1;locus_tag=JYJ20_RS11055;product=antA/AntB antirepressor family protein;protein_id=WP_209026250.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 5580 5951 . - . ID=gene-JYJ20_RS12280;Name=JYJ20_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12280 NZ_JAFIRP010000036.1 GeneMarkS-2+ CDS 5580 5951 . - 0 ID=cds-WP_245155422.1;Parent=gene-JYJ20_RS12280;Dbxref=GenBank:WP_245155422.1;Name=WP_245155422.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS12280;product=hypothetical protein;protein_id=WP_245155422.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 5968 6399 . - . ID=gene-JYJ20_RS11065;Name=JYJ20_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11065 NZ_JAFIRP010000036.1 Protein Homology CDS 5968 6399 . - 0 ID=cds-WP_209026251.1;Parent=gene-JYJ20_RS11065;Dbxref=GenBank:WP_209026251.1;Name=WP_209026251.1;Ontology_term=GO:0051276,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=chromosome organization|0051276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010907330.1;locus_tag=JYJ20_RS11065;product=terminase small subunit;protein_id=WP_209026251.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 6396 6821 . - . ID=gene-JYJ20_RS11070;Name=JYJ20_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11070 NZ_JAFIRP010000036.1 Protein Homology CDS 6396 6821 . - 0 ID=cds-WP_006250289.1;Parent=gene-JYJ20_RS11070;Dbxref=GenBank:WP_006250289.1;Name=WP_006250289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250289.1;locus_tag=JYJ20_RS11070;product=hypothetical protein;protein_id=WP_006250289.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 6828 7115 . - . ID=gene-JYJ20_RS11075;Name=JYJ20_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11075 NZ_JAFIRP010000036.1 Protein Homology CDS 6828 7115 . - 0 ID=cds-WP_245155423.1;Parent=gene-JYJ20_RS11075;Dbxref=GenBank:WP_245155423.1;Name=WP_245155423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005713023.1;locus_tag=JYJ20_RS11075;product=hypothetical protein;protein_id=WP_245155423.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 7115 7783 . - . ID=gene-JYJ20_RS11080;Name=JYJ20_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11080 NZ_JAFIRP010000036.1 Protein Homology CDS 7115 7783 . - 0 ID=cds-WP_209026252.1;Parent=gene-JYJ20_RS11080;Dbxref=GenBank:WP_209026252.1;Name=WP_209026252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005548525.1;locus_tag=JYJ20_RS11080;product=Rha family transcriptional regulator;protein_id=WP_209026252.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 7791 8024 . - . ID=gene-JYJ20_RS11085;Name=JYJ20_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11085 NZ_JAFIRP010000036.1 Protein Homology CDS 7791 8024 . - 0 ID=cds-WP_006252014.1;Parent=gene-JYJ20_RS11085;Dbxref=GenBank:WP_006252014.1;Name=WP_006252014.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252014.1;locus_tag=JYJ20_RS11085;product=helix-turn-helix transcriptional regulator;protein_id=WP_006252014.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 8247 9005 . - . ID=gene-JYJ20_RS11090;Name=JYJ20_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11090 NZ_JAFIRP010000036.1 GeneMarkS-2+ CDS 8247 9005 . - 0 ID=cds-WP_209026253.1;Parent=gene-JYJ20_RS11090;Dbxref=GenBank:WP_209026253.1;Name=WP_209026253.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS11090;product=hypothetical protein;protein_id=WP_209026253.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 9015 9701 . - . ID=gene-JYJ20_RS11095;Name=JYJ20_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11095 NZ_JAFIRP010000036.1 Protein Homology CDS 9015 9701 . - 0 ID=cds-WP_006250286.1;Parent=gene-JYJ20_RS11095;Dbxref=GenBank:WP_006250286.1;Name=WP_006250286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250286.1;locus_tag=JYJ20_RS11095;product=hypothetical protein;protein_id=WP_006250286.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 10095 10418 . - . ID=gene-JYJ20_RS11100;Name=JYJ20_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11100 NZ_JAFIRP010000036.1 Protein Homology CDS 10095 10418 . - 0 ID=cds-WP_006250284.1;Parent=gene-JYJ20_RS11100;Dbxref=GenBank:WP_006250284.1;Name=WP_006250284.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250284.1;locus_tag=JYJ20_RS11100;product=addiction module antidote protein;protein_id=WP_006250284.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 10531 10749 . - . ID=gene-JYJ20_RS12485;Name=JYJ20_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12485 NZ_JAFIRP010000036.1 GeneMarkS-2+ CDS 10531 10749 . - 0 ID=cds-WP_209026254.1;Parent=gene-JYJ20_RS12485;Dbxref=GenBank:WP_209026254.1;Name=WP_209026254.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS12485;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_209026254.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 11055 12281 . - . ID=gene-JYJ20_RS11110;Name=JYJ20_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11110 NZ_JAFIRP010000036.1 Protein Homology CDS 11055 12281 . - 0 ID=cds-WP_006250282.1;Parent=gene-JYJ20_RS11110;Dbxref=GenBank:WP_006250282.1;Name=WP_006250282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250282.1;locus_tag=JYJ20_RS11110;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_006250282.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 13072 14451 . - . ID=gene-JYJ20_RS11115;Name=JYJ20_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11115 NZ_JAFIRP010000036.1 Protein Homology CDS 13072 14451 . - 0 ID=cds-WP_209026255.1;Parent=gene-JYJ20_RS11115;Dbxref=GenBank:WP_209026255.1;Name=WP_209026255.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01613.1;locus_tag=JYJ20_RS11115;product=DNA primase family protein;protein_id=WP_209026255.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 14498 14800 . - . ID=gene-JYJ20_RS11120;Name=JYJ20_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11120 NZ_JAFIRP010000036.1 GeneMarkS-2+ CDS 14498 14800 . - 0 ID=cds-WP_209026256.1;Parent=gene-JYJ20_RS11120;Dbxref=GenBank:WP_209026256.1;Name=WP_209026256.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS11120;product=hypothetical protein;protein_id=WP_209026256.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 14797 15024 . - . ID=gene-JYJ20_RS11125;Name=JYJ20_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11125 NZ_JAFIRP010000036.1 Protein Homology CDS 14797 15024 . - 0 ID=cds-WP_209026257.1;Parent=gene-JYJ20_RS11125;Dbxref=GenBank:WP_209026257.1;Name=WP_209026257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252895.1;locus_tag=JYJ20_RS11125;product=hypothetical protein;protein_id=WP_209026257.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 15018 15635 . - . ID=gene-JYJ20_RS11130;Name=JYJ20_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11130 NZ_JAFIRP010000036.1 Protein Homology CDS 15018 15635 . - 0 ID=cds-WP_209026258.1;Parent=gene-JYJ20_RS11130;Dbxref=GenBank:WP_209026258.1;Name=WP_209026258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250237.1;locus_tag=JYJ20_RS11130;product=hypothetical protein;protein_id=WP_209026258.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 15628 16215 . - . ID=gene-JYJ20_RS11135;Name=JYJ20_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11135 NZ_JAFIRP010000036.1 Protein Homology CDS 15628 16215 . - 0 ID=cds-WP_209026259.1;Parent=gene-JYJ20_RS11135;Dbxref=GenBank:WP_209026259.1;Name=WP_209026259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005713036.1;locus_tag=JYJ20_RS11135;product=ash family protein;protein_id=WP_209026259.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 16411 16611 . - . ID=gene-JYJ20_RS11140;Name=JYJ20_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11140 NZ_JAFIRP010000036.1 Protein Homology CDS 16411 16611 . - 0 ID=cds-WP_209026260.1;Parent=gene-JYJ20_RS11140;Dbxref=GenBank:WP_209026260.1;Name=WP_209026260.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024139.7;locus_tag=JYJ20_RS11140;product=helix-turn-helix transcriptional regulator;protein_id=WP_209026260.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 16786 17754 . - . ID=gene-JYJ20_RS11145;Name=JYJ20_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11145 NZ_JAFIRP010000036.1 GeneMarkS-2+ CDS 16786 17754 . - 0 ID=cds-WP_209026261.1;Parent=gene-JYJ20_RS11145;Dbxref=GenBank:WP_209026261.1;Name=WP_209026261.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS11145;product=hypothetical protein;protein_id=WP_209026261.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 17860 18474 . - . ID=gene-JYJ20_RS11150;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=JYJ20_RS11150 NZ_JAFIRP010000036.1 Protein Homology CDS 17860 18474 . - 0 ID=cds-WP_245155424.1;Parent=gene-JYJ20_RS11150;Dbxref=GenBank:WP_245155424.1;Name=WP_245155424.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;gene=gpM;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252888.1;locus_tag=JYJ20_RS11150;product=phage terminase small subunit;protein_id=WP_245155424.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 18515 19534 . - . ID=gene-JYJ20_RS11155;Name=JYJ20_RS11155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11155 NZ_JAFIRP010000036.1 Protein Homology CDS 18515 19534 . - 0 ID=cds-WP_209026262.1;Parent=gene-JYJ20_RS11155;Dbxref=GenBank:WP_209026262.1;Name=WP_209026262.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252887.1;locus_tag=JYJ20_RS11155;product=phage major capsid protein%2C P2 family;protein_id=WP_209026262.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 19550 20272 . - . ID=gene-JYJ20_RS11160;Name=JYJ20_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11160 NZ_JAFIRP010000036.1 Protein Homology CDS 19550 20272 . - 0 ID=cds-WP_209026263.1;Parent=gene-JYJ20_RS11160;Dbxref=GenBank:WP_209026263.1;Name=WP_209026263.1;Ontology_term=GO:0019069;gbkey=CDS;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005653044.1;locus_tag=JYJ20_RS11160;product=GPO family capsid scaffolding protein;protein_id=WP_209026263.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 20293 20970 . - . ID=gene-JYJ20_RS11165;Name=JYJ20_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11165 NZ_JAFIRP010000036.1 GeneMarkS-2+ CDS 20293 20970 . - 0 ID=cds-WP_209026264.1;Parent=gene-JYJ20_RS11165;Dbxref=GenBank:WP_209026264.1;Name=WP_209026264.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS11165;product=hypothetical protein;protein_id=WP_209026264.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 20973 21170 . - . ID=gene-JYJ20_RS11170;Name=JYJ20_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11170 NZ_JAFIRP010000036.1 Protein Homology CDS 20973 21170 . - 0 ID=cds-WP_209026265.1;Parent=gene-JYJ20_RS11170;Dbxref=GenBank:WP_209026265.1;Name=WP_209026265.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252884.1;locus_tag=JYJ20_RS11170;product=helix-turn-helix transcriptional regulator;protein_id=WP_209026265.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 21744 22943 . - . ID=gene-JYJ20_RS11175;Name=JYJ20_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11175 NZ_JAFIRP010000036.1 Protein Homology CDS 21744 22943 . - 0 ID=cds-WP_209026266.1;Parent=gene-JYJ20_RS11175;Dbxref=GenBank:WP_209026266.1;Name=WP_209026266.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.7;locus_tag=JYJ20_RS11175;product=tyrosine-type recombinase/integrase;protein_id=WP_209026266.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 23140 23506 . - . ID=gene-JYJ20_RS11180;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=JYJ20_RS11180 NZ_JAFIRP010000036.1 cmsearch tmRNA 23140 23506 . - . ID=rna-JYJ20_RS11180;Parent=gene-JYJ20_RS11180;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=JYJ20_RS11180;product=transfer-messenger RNA NZ_JAFIRP010000036.1 cmsearch exon 23140 23506 . - . ID=exon-JYJ20_RS11180-1;Parent=rna-JYJ20_RS11180;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=JYJ20_RS11180;product=transfer-messenger RNA NZ_JAFIRP010000036.1 RefSeq gene 23672 24631 . + . ID=gene-JYJ20_RS11185;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=JYJ20_RS11185 NZ_JAFIRP010000036.1 Protein Homology CDS 23672 24631 . + 0 ID=cds-WP_209026267.1;Parent=gene-JYJ20_RS11185;Dbxref=GenBank:WP_209026267.1;Name=WP_209026267.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250280.1;locus_tag=JYJ20_RS11185;product=RNA polymerase sigma factor RpoH;protein_id=WP_209026267.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 24772 25080 . + . ID=gene-JYJ20_RS11190;Name=JYJ20_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11190 NZ_JAFIRP010000036.1 Protein Homology CDS 24772 25080 . + 0 ID=cds-WP_031200775.1;Parent=gene-JYJ20_RS11190;Dbxref=GenBank:WP_031200775.1;Name=WP_031200775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761036.1;locus_tag=JYJ20_RS11190;product=DUF3144 domain-containing protein;protein_id=WP_031200775.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 25098 25400 . - . ID=gene-JYJ20_RS11195;Name=JYJ20_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11195 NZ_JAFIRP010000036.1 Protein Homology CDS 25098 25400 . - 0 ID=cds-WP_006250278.1;Parent=gene-JYJ20_RS11195;Dbxref=GenBank:WP_006250278.1;Name=WP_006250278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250278.1;locus_tag=JYJ20_RS11195;product=BrnA antitoxin family protein;protein_id=WP_006250278.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 25372 25662 . - . ID=gene-JYJ20_RS11200;Name=JYJ20_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11200 NZ_JAFIRP010000036.1 Protein Homology CDS 25372 25662 . - 0 ID=cds-WP_006250894.1;Parent=gene-JYJ20_RS11200;Dbxref=GenBank:WP_006250894.1;Name=WP_006250894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250894.1;locus_tag=JYJ20_RS11200;product=BrnT family toxin;protein_id=WP_006250894.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 25800 26339 . - . ID=gene-JYJ20_RS11205;Name=JYJ20_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11205 NZ_JAFIRP010000036.1 Protein Homology CDS 25800 26339 . - 0 ID=cds-WP_006250276.1;Parent=gene-JYJ20_RS11205;Dbxref=GenBank:WP_006250276.1;Name=WP_006250276.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250276.1;locus_tag=JYJ20_RS11205;product=KdsC family phosphatase;protein_id=WP_006250276.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 26410 27087 . + . ID=gene-JYJ20_RS11210;Name=JYJ20_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11210 NZ_JAFIRP010000036.1 Protein Homology CDS 26410 27087 . + 0 ID=cds-WP_209026268.1;Parent=gene-JYJ20_RS11210;Dbxref=GenBank:WP_209026268.1;Name=WP_209026268.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250275.1;locus_tag=JYJ20_RS11210;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_209026268.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 27272 29119 . + . ID=gene-JYJ20_RS11215;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=JYJ20_RS11215 NZ_JAFIRP010000036.1 Protein Homology CDS 27272 29119 . + 0 ID=cds-WP_006250274.1;Parent=gene-JYJ20_RS11215;Dbxref=GenBank:WP_006250274.1;Name=WP_006250274.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250274.1;locus_tag=JYJ20_RS11215;product=translational GTPase TypA;protein_id=WP_006250274.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 29168 29605 . - . ID=gene-JYJ20_RS11220;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=JYJ20_RS11220 NZ_JAFIRP010000036.1 Protein Homology CDS 29168 29605 . - 0 ID=cds-WP_006250273.1;Parent=gene-JYJ20_RS11220;Dbxref=GenBank:WP_006250273.1;Name=WP_006250273.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616368.1;locus_tag=JYJ20_RS11220;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_006250273.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 29598 30020 . - . ID=gene-JYJ20_RS11225;Name=JYJ20_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11225 NZ_JAFIRP010000036.1 Protein Homology CDS 29598 30020 . - 0 ID=cds-WP_006250272.1;Parent=gene-JYJ20_RS11225;Dbxref=GenBank:WP_006250272.1;Name=WP_006250272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250272.1;locus_tag=JYJ20_RS11225;product=DNA polymerase III subunit psi;protein_id=WP_006250272.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 30150 31139 . + . ID=gene-JYJ20_RS11230;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=JYJ20_RS11230 NZ_JAFIRP010000036.1 Protein Homology CDS 30150 31139 . + 0 ID=cds-WP_006250271.1;Parent=gene-JYJ20_RS11230;Dbxref=GenBank:WP_006250271.1;Name=WP_006250271.1;Ontology_term=GO:0006364,GO:0032259,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250271.1;locus_tag=JYJ20_RS11230;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_006250271.1;transl_table=11 NZ_JAFIRP010000036.1 cmsearch sequence_feature 31269 31391 . + . ID=id-NZ_JAFIRP010000036.1:31269..31391;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JAFIRP010000036.1 RefSeq gene 31413 31790 . + . ID=gene-JYJ20_RS11235;Name=JYJ20_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11235 NZ_JAFIRP010000036.1 GeneMarkS-2+ CDS 31413 31790 . + 0 ID=cds-WP_006250270.1;Parent=gene-JYJ20_RS11235;Dbxref=GenBank:WP_006250270.1;Name=WP_006250270.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS11235;product=virulence RhuM family protein;protein_id=WP_006250270.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 31857 32297 . + . ID=gene-JYJ20_RS11240;Name=JYJ20_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11240 NZ_JAFIRP010000036.1 Protein Homology CDS 31857 32297 . + 0 ID=cds-WP_006250269.1;Parent=gene-JYJ20_RS11240;Dbxref=GenBank:WP_006250269.1;Name=WP_006250269.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250269.1;locus_tag=JYJ20_RS11240;product=GNAT family N-acetyltransferase;protein_id=WP_006250269.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 32327 33394 . + . ID=gene-JYJ20_RS11245;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=JYJ20_RS11245 NZ_JAFIRP010000036.1 Protein Homology CDS 32327 33394 . + 0 ID=cds-WP_006250268.1;Parent=gene-JYJ20_RS11245;Dbxref=GenBank:WP_006250268.1;Name=WP_006250268.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=L-histidinol-phosphate:2-oxoglutarate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250900.1;locus_tag=JYJ20_RS11245;product=histidinol-phosphate transaminase;protein_id=WP_006250268.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 33579 34667 . + . ID=gene-JYJ20_RS11250;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=JYJ20_RS11250 NZ_JAFIRP010000036.1 Protein Homology CDS 33579 34667 . + 0 ID=cds-WP_006250267.1;Parent=gene-JYJ20_RS11250;Dbxref=GenBank:WP_006250267.1;Name=WP_006250267.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018355873.1;locus_tag=JYJ20_RS11250;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_006250267.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 34762 35046 . + . ID=gene-JYJ20_RS11255;Name=JYJ20_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11255 NZ_JAFIRP010000036.1 Protein Homology CDS 34762 35046 . + 0 ID=cds-WP_006250266.1;Parent=gene-JYJ20_RS11255;Dbxref=GenBank:WP_006250266.1;Name=WP_006250266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250266.1;locus_tag=JYJ20_RS11255;product=hypothetical protein;protein_id=WP_006250266.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 35059 35814 . + . ID=gene-JYJ20_RS11260;Name=JYJ20_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11260 NZ_JAFIRP010000036.1 Protein Homology CDS 35059 35814 . + 0 ID=cds-WP_006250265.1;Parent=gene-JYJ20_RS11260;Dbxref=GenBank:WP_006250265.1;Name=WP_006250265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250265.1;locus_tag=JYJ20_RS11260;product=putative phage abortive infection protein;protein_id=WP_006250265.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 35811 36404 . + . ID=gene-JYJ20_RS11265;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=JYJ20_RS11265 NZ_JAFIRP010000036.1 Protein Homology CDS 35811 36404 . + 0 ID=cds-WP_006253763.1;Parent=gene-JYJ20_RS11265;Dbxref=GenBank:WP_006253763.1;Name=WP_006253763.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015431920.1;locus_tag=JYJ20_RS11265;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_006253763.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 36503 37348 . + . ID=gene-JYJ20_RS11270;Name=JYJ20_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11270 NZ_JAFIRP010000036.1 Protein Homology CDS 36503 37348 . + 0 ID=cds-WP_006253762.1;Parent=gene-JYJ20_RS11270;Dbxref=GenBank:WP_006253762.1;Name=WP_006253762.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250903.1;locus_tag=JYJ20_RS11270;product=BRO family protein;protein_id=WP_006253762.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 37518 38267 . + . ID=gene-JYJ20_RS11275;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=JYJ20_RS11275 NZ_JAFIRP010000036.1 Protein Homology CDS 37518 38267 . + 0 ID=cds-WP_006249543.1;Parent=gene-JYJ20_RS11275;Dbxref=GenBank:WP_006249543.1;Name=WP_006249543.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006995165.1;locus_tag=JYJ20_RS11275;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_006249543.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 38249 39022 . + . ID=gene-JYJ20_RS11280;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=JYJ20_RS11280 NZ_JAFIRP010000036.1 Protein Homology CDS 38249 39022 . + 0 ID=cds-WP_006250905.1;Parent=gene-JYJ20_RS11280;Dbxref=GenBank:WP_006250905.1;Name=WP_006250905.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005624689.1;locus_tag=JYJ20_RS11280;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_006250905.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 39019 39405 . + . ID=gene-JYJ20_RS11285;Name=JYJ20_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11285 NZ_JAFIRP010000036.1 Protein Homology CDS 39019 39405 . + 0 ID=cds-WP_006249545.1;Parent=gene-JYJ20_RS11285;Dbxref=GenBank:WP_006249545.1;Name=WP_006249545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249545.1;locus_tag=JYJ20_RS11285;product=VOC family protein;protein_id=WP_006249545.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq pseudogene 39427 40071 . + . ID=gene-JYJ20_RS11290;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=pseudogene;locus_tag=JYJ20_RS11290;partial=true;pseudo=true;start_range=.,39427 NZ_JAFIRP010000036.1 Protein Homology CDS 39427 40071 . + 0 ID=cds-JYJ20_RS11290;Parent=gene-JYJ20_RS11290;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263495.1;locus_tag=JYJ20_RS11290;partial=true;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;pseudo=true;start_range=.,39427;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 40145 41038 . - . ID=gene-JYJ20_RS11295;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=JYJ20_RS11295 NZ_JAFIRP010000036.1 Protein Homology CDS 40145 41038 . - 0 ID=cds-WP_006249547.1;Parent=gene-JYJ20_RS11295;Dbxref=GenBank:WP_006249547.1;Name=WP_006249547.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249547.1;locus_tag=JYJ20_RS11295;product=Hsp33 family molecular chaperone HslO;protein_id=WP_006249547.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 41282 41698 . - . ID=gene-JYJ20_RS11300;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=JYJ20_RS11300 NZ_JAFIRP010000036.1 Protein Homology CDS 41282 41698 . - 0 ID=cds-WP_006249549.1;Parent=gene-JYJ20_RS11300;Dbxref=GenBank:WP_006249549.1;Name=WP_006249549.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249549.1;locus_tag=JYJ20_RS11300;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_006249549.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 41786 42328 . + . ID=gene-JYJ20_RS11305;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=JYJ20_RS11305 NZ_JAFIRP010000036.1 Protein Homology CDS 41786 42328 . + 0 ID=cds-WP_006249550.1;Parent=gene-JYJ20_RS11305;Dbxref=GenBank:WP_006249550.1;Name=WP_006249550.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249550.1;locus_tag=JYJ20_RS11305;product=ADP compounds hydrolase NudE;protein_id=WP_006249550.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 42342 43160 . + . ID=gene-JYJ20_RS11310;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=JYJ20_RS11310 NZ_JAFIRP010000036.1 Protein Homology CDS 42342 43160 . + 0 ID=cds-WP_006249551.1;Parent=gene-JYJ20_RS11310;Dbxref=GenBank:WP_006249551.1;Name=WP_006249551.1;Ontology_term=GO:0006790,GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249551.1;locus_tag=JYJ20_RS11310;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_006249551.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 43235 44722 . + . ID=gene-JYJ20_RS11315;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=JYJ20_RS11315 NZ_JAFIRP010000036.1 Protein Homology CDS 43235 44722 . + 0 ID=cds-WP_006249552.1;Parent=gene-JYJ20_RS11315;Dbxref=GenBank:WP_006249552.1;Name=WP_006249552.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651427.1;locus_tag=JYJ20_RS11315;product=glucose-6-phosphate dehydrogenase;protein_id=WP_006249552.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 44772 45470 . + . ID=gene-JYJ20_RS11320;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=JYJ20_RS11320 NZ_JAFIRP010000036.1 Protein Homology CDS 44772 45470 . + 0 ID=cds-WP_006249553.1;Parent=gene-JYJ20_RS11320;Dbxref=GenBank:WP_006249553.1;Name=WP_006249553.1;Ontology_term=GO:0005975,GO:0006098,GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=carbohydrate metabolic process|0005975||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250911.1;locus_tag=JYJ20_RS11320;product=6-phosphogluconolactonase;protein_id=WP_006249553.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 45646 46533 . + . ID=gene-JYJ20_RS11325;Name=JYJ20_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11325 NZ_JAFIRP010000036.1 Protein Homology CDS 45646 46533 . + 0 ID=cds-WP_006249554.1;Parent=gene-JYJ20_RS11325;Dbxref=GenBank:WP_006249554.1;Name=WP_006249554.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249554.1;locus_tag=JYJ20_RS11325;product=ORF6N domain-containing protein;protein_id=WP_006249554.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 46543 47232 . + . ID=gene-JYJ20_RS11330;Name=JYJ20_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11330 NZ_JAFIRP010000036.1 Protein Homology CDS 46543 47232 . + 0 ID=cds-WP_006249555.1;Parent=gene-JYJ20_RS11330;Dbxref=GenBank:WP_006249555.1;Name=WP_006249555.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249555.1;locus_tag=JYJ20_RS11330;product=aspartate/glutamate racemase family protein;protein_id=WP_006249555.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 47315 48769 . + . ID=gene-JYJ20_RS11335;Name=gnd;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=JYJ20_RS11335 NZ_JAFIRP010000036.1 Protein Homology CDS 47315 48769 . + 0 ID=cds-WP_006249556.1;Parent=gene-JYJ20_RS11335;Dbxref=GenBank:WP_006249556.1;Name=WP_006249556.1;Ontology_term=GO:0006098,GO:0004616,GO:0005737;gbkey=CDS;gene=gnd;go_component=cytoplasm|0005737||IEA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005714317.1;locus_tag=JYJ20_RS11335;product=decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase;protein_id=WP_006249556.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 48904 49497 . + . ID=gene-JYJ20_RS11340;Name=JYJ20_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11340 NZ_JAFIRP010000036.1 Protein Homology CDS 48904 49497 . + 0 ID=cds-WP_006249557.1;Parent=gene-JYJ20_RS11340;Dbxref=GenBank:WP_006249557.1;Name=WP_006249557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249557.1;locus_tag=JYJ20_RS11340;product=SGNH/GDSL hydrolase family protein;protein_id=WP_006249557.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 49568 52432 . - . ID=gene-JYJ20_RS11345;Name=JYJ20_RS11345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11345 NZ_JAFIRP010000036.1 Protein Homology CDS 49568 52432 . - 0 ID=cds-WP_209026270.1;Parent=gene-JYJ20_RS11345;Dbxref=GenBank:WP_209026270.1;Name=WP_209026270.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012771641.1;locus_tag=JYJ20_RS11345;product=valine--tRNA ligase;protein_id=WP_209026270.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 52549 53247 . - . ID=gene-JYJ20_RS11350;Name=JYJ20_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11350 NZ_JAFIRP010000036.1 Protein Homology CDS 52549 53247 . - 0 ID=cds-WP_006249559.1;Parent=gene-JYJ20_RS11350;Dbxref=GenBank:WP_006249559.1;Name=WP_006249559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249559.1;locus_tag=JYJ20_RS11350;product=hypothetical protein;protein_id=WP_006249559.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 53492 54085 . - . ID=gene-JYJ20_RS11355;Name=JYJ20_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11355 NZ_JAFIRP010000036.1 Protein Homology CDS 53492 54085 . - 0 ID=cds-WP_006249560.1;Parent=gene-JYJ20_RS11355;Dbxref=GenBank:WP_006249560.1;Name=WP_006249560.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249560.1;locus_tag=JYJ20_RS11355;product=ATPase;protein_id=WP_006249560.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 54075 54245 . - . ID=gene-JYJ20_RS11360;Name=JYJ20_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11360 NZ_JAFIRP010000036.1 Protein Homology CDS 54075 54245 . - 0 ID=cds-WP_006249561.1;Parent=gene-JYJ20_RS11360;Dbxref=GenBank:WP_006249561.1;Name=WP_006249561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249561.1;locus_tag=JYJ20_RS11360;product=hypothetical protein;protein_id=WP_006249561.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 54247 54993 . - . ID=gene-JYJ20_RS11365;Name=JYJ20_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11365 NZ_JAFIRP010000036.1 Protein Homology CDS 54247 54993 . - 0 ID=cds-WP_006252873.1;Parent=gene-JYJ20_RS11365;Dbxref=GenBank:WP_006252873.1;Name=WP_006252873.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250915.1;locus_tag=JYJ20_RS11365;product=Fic family protein;protein_id=WP_006252873.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 54990 55433 . - . ID=gene-JYJ20_RS11370;Name=JYJ20_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11370 NZ_JAFIRP010000036.1 Protein Homology CDS 54990 55433 . - 0 ID=cds-WP_006249562.1;Parent=gene-JYJ20_RS11370;Dbxref=GenBank:WP_006249562.1;Name=WP_006249562.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250916.1;locus_tag=JYJ20_RS11370;product=GNAT family N-acetyltransferase;protein_id=WP_006249562.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 55427 55864 . - . ID=gene-JYJ20_RS11375;Name=JYJ20_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11375 NZ_JAFIRP010000036.1 Protein Homology CDS 55427 55864 . - 0 ID=cds-WP_006249563.1;Parent=gene-JYJ20_RS11375;Dbxref=GenBank:WP_006249563.1;Name=WP_006249563.1;Ontology_term=GO:0006260,GO:0006261,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA,DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249563.1;locus_tag=JYJ20_RS11375;product=DNA polymerase III subunit chi;protein_id=WP_006249563.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 56103 56546 . + . ID=gene-JYJ20_RS11380;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=JYJ20_RS11380 NZ_JAFIRP010000036.1 Protein Homology CDS 56103 56546 . + 0 ID=cds-WP_006249564.1;Parent=gene-JYJ20_RS11380;Dbxref=GenBank:WP_006249564.1;Name=WP_006249564.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598764.1;locus_tag=JYJ20_RS11380;product=peptidoglycan-binding protein LysM;protein_id=WP_006249564.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 56600 57451 . - . ID=gene-JYJ20_RS11385;Name=JYJ20_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11385 NZ_JAFIRP010000036.1 Protein Homology CDS 56600 57451 . - 0 ID=cds-WP_006249565.1;Parent=gene-JYJ20_RS11385;Dbxref=GenBank:WP_006249565.1;Name=WP_006249565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005701564.1;locus_tag=JYJ20_RS11385;product=thymidylate synthase;protein_id=WP_006249565.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 57544 58095 . + . ID=gene-JYJ20_RS11390;Name=JYJ20_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11390 NZ_JAFIRP010000036.1 Protein Homology CDS 57544 58095 . + 0 ID=cds-WP_006249566.1;Parent=gene-JYJ20_RS11390;Dbxref=GenBank:WP_006249566.1;Name=WP_006249566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249566.1;locus_tag=JYJ20_RS11390;product=hypothetical protein;protein_id=WP_006249566.1;transl_table=11 NZ_JAFIRP010000036.1 RefSeq gene 58304 58398 . + . ID=gene-JYJ20_RS11395;Name=JYJ20_RS11395;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS11395 NZ_JAFIRP010000036.1 tRNAscan-SE tRNA 58304 58398 . + . ID=rna-JYJ20_RS11395;Parent=gene-JYJ20_RS11395;anticodon=(pos:58339..58341);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS11395;product=tRNA-Ser NZ_JAFIRP010000036.1 tRNAscan-SE exon 58304 58398 . + . ID=exon-JYJ20_RS11395-1;Parent=rna-JYJ20_RS11395;anticodon=(pos:58339..58341);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS11395;product=tRNA-Ser ##sequence-region NZ_JAFIRP010000037.1 1 36558 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000037.1 RefSeq region 1 36558 . + . ID=NZ_JAFIRP010000037.1:1..36558;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000037.1 RefSeq gene 222 1097 . - . ID=gene-JYJ20_RS11400;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=JYJ20_RS11400 NZ_JAFIRP010000037.1 Protein Homology CDS 222 1097 . - 0 ID=cds-WP_006248097.1;Parent=gene-JYJ20_RS11400;Dbxref=GenBank:WP_006248097.1;Name=WP_006248097.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248097.1;locus_tag=JYJ20_RS11400;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_006248097.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 1090 1851 . - . ID=gene-JYJ20_RS11405;Name=JYJ20_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11405 NZ_JAFIRP010000037.1 Protein Homology CDS 1090 1851 . - 0 ID=cds-WP_006248096.1;Parent=gene-JYJ20_RS11405;Dbxref=GenBank:WP_006248096.1;Name=WP_006248096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248096.1;locus_tag=JYJ20_RS11405;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_006248096.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 1918 3285 . - . ID=gene-JYJ20_RS11410;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=JYJ20_RS11410 NZ_JAFIRP010000037.1 Protein Homology CDS 1918 3285 . - 0 ID=cds-WP_006248095.1;Parent=gene-JYJ20_RS11410;Dbxref=GenBank:WP_006248095.1;Name=WP_006248095.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651895.1;locus_tag=JYJ20_RS11410;product=adenylosuccinate lyase;protein_id=WP_006248095.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 3319 3948 . - . ID=gene-JYJ20_RS11415;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=JYJ20_RS11415 NZ_JAFIRP010000037.1 Protein Homology CDS 3319 3948 . - 0 ID=cds-WP_006248094.1;Parent=gene-JYJ20_RS11415;Dbxref=GenBank:WP_006248094.1;Name=WP_006248094.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250660.1;locus_tag=JYJ20_RS11415;product=high frequency lysogenization protein HflD;protein_id=WP_006248094.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 4080 5744 . - . ID=gene-JYJ20_RS11420;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=JYJ20_RS11420 NZ_JAFIRP010000037.1 Protein Homology CDS 4080 5744 . - 0 ID=cds-WP_134916704.1;Parent=gene-JYJ20_RS11420;Dbxref=GenBank:WP_134916704.1;Name=WP_134916704.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248093.1;locus_tag=JYJ20_RS11420;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_134916704.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 5744 7510 . - . ID=gene-JYJ20_RS11425;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=JYJ20_RS11425 NZ_JAFIRP010000037.1 Protein Homology CDS 5744 7510 . - 0 ID=cds-WP_006248092.1;Parent=gene-JYJ20_RS11425;Dbxref=GenBank:WP_006248092.1;Name=WP_006248092.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250658.1;locus_tag=JYJ20_RS11425;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_006248092.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 7625 11722 . - . ID=gene-JYJ20_RS11430;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=JYJ20_RS11430 NZ_JAFIRP010000037.1 Protein Homology CDS 7625 11722 . - 0 ID=cds-WP_006253502.1;Parent=gene-JYJ20_RS11430;Dbxref=GenBank:WP_006253502.1;Name=WP_006253502.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248090.1;locus_tag=JYJ20_RS11430;product=autotransporter assembly complex protein TamB;protein_id=WP_006253502.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 11803 13638 . - . ID=gene-JYJ20_RS11435;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=JYJ20_RS11435 NZ_JAFIRP010000037.1 Protein Homology CDS 11803 13638 . - 0 ID=cds-WP_006248089.1;Parent=gene-JYJ20_RS11435;Dbxref=GenBank:WP_006248089.1;Name=WP_006248089.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252539.1;locus_tag=JYJ20_RS11435;product=autotransporter assembly complex protein TamA;protein_id=WP_006248089.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 13650 14495 . - . ID=gene-JYJ20_RS11440;Name=JYJ20_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11440 NZ_JAFIRP010000037.1 Protein Homology CDS 13650 14495 . - 0 ID=cds-WP_006248088.1;Parent=gene-JYJ20_RS11440;Dbxref=GenBank:WP_006248088.1;Name=WP_006248088.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248088.1;locus_tag=JYJ20_RS11440;product=divergent polysaccharide deacetylase family protein;protein_id=WP_006248088.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 14496 15659 . - . ID=gene-JYJ20_RS11445;Name=JYJ20_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11445 NZ_JAFIRP010000037.1 Protein Homology CDS 14496 15659 . - 0 ID=cds-WP_006248087.1;Parent=gene-JYJ20_RS11445;Dbxref=GenBank:WP_006248087.1;Name=WP_006248087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248087.1;locus_tag=JYJ20_RS11445;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_006248087.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 15827 16510 . + . ID=gene-JYJ20_RS11450;Name=JYJ20_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11450 NZ_JAFIRP010000037.1 Protein Homology CDS 15827 16510 . + 0 ID=cds-WP_006248086.1;Parent=gene-JYJ20_RS11450;Dbxref=GenBank:WP_006248086.1;Name=WP_006248086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011201466.1;locus_tag=JYJ20_RS11450;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_006248086.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 16647 17204 . - . ID=gene-JYJ20_RS11455;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=JYJ20_RS11455 NZ_JAFIRP010000037.1 Protein Homology CDS 16647 17204 . - 0 ID=cds-WP_006248085.1;Parent=gene-JYJ20_RS11455;Dbxref=GenBank:WP_006248085.1;Name=WP_006248085.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991577.1;locus_tag=JYJ20_RS11455;product=ribosome recycling factor;protein_id=WP_006248085.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 17256 17972 . - . ID=gene-JYJ20_RS11460;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=JYJ20_RS11460 NZ_JAFIRP010000037.1 Protein Homology CDS 17256 17972 . - 0 ID=cds-WP_006248084.1;Parent=gene-JYJ20_RS11460;Dbxref=GenBank:WP_006248084.1;Name=WP_006248084.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250650.1;locus_tag=JYJ20_RS11460;product=UMP kinase;protein_id=WP_006248084.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 18064 19626 . + . ID=gene-JYJ20_RS11465;Name=JYJ20_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11465 NZ_JAFIRP010000037.1 Protein Homology CDS 18064 19626 . + 0 ID=cds-WP_006248083.1;Parent=gene-JYJ20_RS11465;Dbxref=GenBank:WP_006248083.1;Name=WP_006248083.1;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252537.1;locus_tag=JYJ20_RS11465;product=phosphoethanolamine transferase;protein_id=WP_006248083.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 19690 20541 . - . ID=gene-JYJ20_RS11470;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=JYJ20_RS11470 NZ_JAFIRP010000037.1 Protein Homology CDS 19690 20541 . - 0 ID=cds-WP_006248082.1;Parent=gene-JYJ20_RS11470;Dbxref=GenBank:WP_006248082.1;Name=WP_006248082.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011609244.1;locus_tag=JYJ20_RS11470;product=translation elongation factor Ts;protein_id=WP_006248082.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 20637 21356 . - . ID=gene-JYJ20_RS11475;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=JYJ20_RS11475 NZ_JAFIRP010000037.1 Protein Homology CDS 20637 21356 . - 0 ID=cds-WP_006253501.1;Parent=gene-JYJ20_RS11475;Dbxref=GenBank:WP_006253501.1;Name=WP_006253501.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991581.1;locus_tag=JYJ20_RS11475;product=30S ribosomal protein S2;protein_id=WP_006253501.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 21701 22729 . + . ID=gene-JYJ20_RS11480;Name=JYJ20_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11480 NZ_JAFIRP010000037.1 Protein Homology CDS 21701 22729 . + 0 ID=cds-WP_006253500.1;Parent=gene-JYJ20_RS11480;Dbxref=GenBank:WP_006253500.1;Name=WP_006253500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253500.1;locus_tag=JYJ20_RS11480;product=Fe(3+) ABC transporter substrate-binding protein;protein_id=WP_006253500.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 22852 24498 . + . ID=gene-JYJ20_RS11485;Name=JYJ20_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11485 NZ_JAFIRP010000037.1 Protein Homology CDS 22852 24498 . + 0 ID=cds-WP_006248079.1;Parent=gene-JYJ20_RS11485;Dbxref=GenBank:WP_006248079.1;Name=WP_006248079.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484659.1;locus_tag=JYJ20_RS11485;product=ABC transporter permease;protein_id=WP_006248079.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 24508 25518 . + . ID=gene-JYJ20_RS11490;Name=JYJ20_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11490 NZ_JAFIRP010000037.1 Protein Homology CDS 24508 25518 . + 0 ID=cds-WP_006248078.1;Parent=gene-JYJ20_RS11490;Dbxref=GenBank:WP_006248078.1;Name=WP_006248078.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250646.1;locus_tag=JYJ20_RS11490;product=ABC transporter ATP-binding protein;protein_id=WP_006248078.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 25528 26154 . + . ID=gene-JYJ20_RS11495;Name=JYJ20_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11495 NZ_JAFIRP010000037.1 Protein Homology CDS 25528 26154 . + 0 ID=cds-WP_006248077.1;Parent=gene-JYJ20_RS11495;Dbxref=GenBank:WP_006248077.1;Name=WP_006248077.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248077.1;locus_tag=JYJ20_RS11495;product=DsbA family oxidoreductase;protein_id=WP_006248077.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 26216 27706 . - . ID=gene-JYJ20_RS11500;Name=JYJ20_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11500 NZ_JAFIRP010000037.1 Protein Homology CDS 26216 27706 . - 0 ID=cds-WP_006248076.1;Parent=gene-JYJ20_RS11500;Dbxref=GenBank:WP_006248076.1;Name=WP_006248076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248076.1;locus_tag=JYJ20_RS11500;product=helicase HerA-like domain-containing protein;protein_id=WP_006248076.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 27765 29000 . - . ID=gene-JYJ20_RS11505;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=JYJ20_RS11505 NZ_JAFIRP010000037.1 Protein Homology CDS 27765 29000 . - 0 ID=cds-WP_209026272.1;Parent=gene-JYJ20_RS11505;Dbxref=GenBank:WP_209026272.1;Name=WP_209026272.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250643.1;locus_tag=JYJ20_RS11505;product=ATP-dependent RNA helicase RhlB;protein_id=WP_209026272.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 29088 29810 . - . ID=gene-JYJ20_RS11510;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=JYJ20_RS11510 NZ_JAFIRP010000037.1 Protein Homology CDS 29088 29810 . - 0 ID=cds-WP_209026273.1;Parent=gene-JYJ20_RS11510;Dbxref=GenBank:WP_209026273.1;Name=WP_209026273.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248074.1;locus_tag=JYJ20_RS11510;product=DNA repair protein RecO;protein_id=WP_209026273.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 30040 30957 . - . ID=gene-JYJ20_RS11515;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=JYJ20_RS11515 NZ_JAFIRP010000037.1 Protein Homology CDS 30040 30957 . - 0 ID=cds-WP_006248073.1;Parent=gene-JYJ20_RS11515;Dbxref=GenBank:WP_006248073.1;Name=WP_006248073.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005603895.1;locus_tag=JYJ20_RS11515;product=GTPase Era;protein_id=WP_006248073.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 31060 31734 . - . ID=gene-JYJ20_RS11520;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=JYJ20_RS11520 NZ_JAFIRP010000037.1 Protein Homology CDS 31060 31734 . - 0 ID=cds-WP_006248072.1;Parent=gene-JYJ20_RS11520;Dbxref=GenBank:WP_006248072.1;Name=WP_006248072.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252425.1;locus_tag=JYJ20_RS11520;product=ribonuclease III;protein_id=WP_006248072.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 31780 32739 . - . ID=gene-JYJ20_RS11525;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=JYJ20_RS11525 NZ_JAFIRP010000037.1 Protein Homology CDS 31780 32739 . - 0 ID=cds-WP_006248071.1;Parent=gene-JYJ20_RS11525;Dbxref=GenBank:WP_006248071.1;Name=WP_006248071.1;Ontology_term=GO:0009306,GO:0051604,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein secretion|0009306||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875129.1;locus_tag=JYJ20_RS11525;product=signal peptidase I;protein_id=WP_006248071.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 32826 34619 . - . ID=gene-JYJ20_RS11530;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=JYJ20_RS11530 NZ_JAFIRP010000037.1 Protein Homology CDS 32826 34619 . - 0 ID=cds-WP_044428183.1;Parent=gene-JYJ20_RS11530;Dbxref=GenBank:WP_044428183.1;Name=WP_044428183.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991607.1;locus_tag=JYJ20_RS11530;product=translation elongation factor 4;protein_id=WP_044428183.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq gene 34892 36121 . + . ID=gene-JYJ20_RS11535;Name=JYJ20_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11535 NZ_JAFIRP010000037.1 Protein Homology CDS 34892 36121 . + 0 ID=cds-WP_021279716.1;Parent=gene-JYJ20_RS11535;Dbxref=GenBank:WP_021279716.1;Name=WP_021279716.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248069.1;locus_tag=JYJ20_RS11535;product=pyridoxal-phosphate-dependent aminotransferase family protein;protein_id=WP_021279716.1;transl_table=11 NZ_JAFIRP010000037.1 RefSeq pseudogene 36315 36558 . + . ID=gene-JYJ20_RS11540;Name=JYJ20_RS11540;end_range=36558,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS11540;partial=true;pseudo=true NZ_JAFIRP010000037.1 Protein Homology CDS 36315 36558 . + 0 ID=cds-JYJ20_RS11540;Parent=gene-JYJ20_RS11540;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=36558,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252422.1;locus_tag=JYJ20_RS11540;partial=true;product=left-handed beta-roll domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAFIRP010000038.1 1 8850 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000038.1 RefSeq region 1 8850 . + . ID=NZ_JAFIRP010000038.1:1..8850;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000038.1 RefSeq gene 1 213 . + . ID=gene-JYJ20_RS11545;Name=JYJ20_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11545;partial=true;start_range=.,1 NZ_JAFIRP010000038.1 GeneMarkS-2+ CDS 1 213 . + 0 ID=cds-WP_209026275.1;Parent=gene-JYJ20_RS11545;Dbxref=GenBank:WP_209026275.1;Name=WP_209026275.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS11545;partial=true;product=hypothetical protein;protein_id=WP_209026275.1;start_range=.,1;transl_table=11 NZ_JAFIRP010000038.1 RefSeq gene 197 1495 . + . ID=gene-JYJ20_RS11550;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=JYJ20_RS11550 NZ_JAFIRP010000038.1 Protein Homology CDS 197 1495 . + 0 ID=cds-WP_006250884.1;Parent=gene-JYJ20_RS11550;Dbxref=GenBank:WP_006250884.1;Name=WP_006250884.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250884.1;locus_tag=JYJ20_RS11550;product=trigger factor;protein_id=WP_006250884.1;transl_table=11 NZ_JAFIRP010000038.1 RefSeq gene 1611 2063 . + . ID=gene-JYJ20_RS11555;Name=JYJ20_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11555 NZ_JAFIRP010000038.1 Protein Homology CDS 1611 2063 . + 0 ID=cds-WP_006250885.1;Parent=gene-JYJ20_RS11555;Dbxref=GenBank:WP_006250885.1;Name=WP_006250885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250885.1;locus_tag=JYJ20_RS11555;product=rhodanese-like domain-containing protein;protein_id=WP_006250885.1;transl_table=11 NZ_JAFIRP010000038.1 RefSeq gene 2084 2584 . + . ID=gene-JYJ20_RS11560;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=JYJ20_RS11560 NZ_JAFIRP010000038.1 Protein Homology CDS 2084 2584 . + 0 ID=cds-WP_006250294.1;Parent=gene-JYJ20_RS11560;Dbxref=GenBank:WP_006250294.1;Name=WP_006250294.1;Ontology_term=GO:0015031,GO:0051262,GO:0051082;gbkey=CDS;gene=secB;go_function=unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,protein tetramerization|0051262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250294.1;locus_tag=JYJ20_RS11560;product=protein-export chaperone SecB;protein_id=WP_006250294.1;transl_table=11 NZ_JAFIRP010000038.1 RefSeq gene 2691 3701 . + . ID=gene-JYJ20_RS11565;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=JYJ20_RS11565 NZ_JAFIRP010000038.1 Protein Homology CDS 2691 3701 . + 0 ID=cds-WP_032844688.1;Parent=gene-JYJ20_RS11565;Dbxref=GenBank:WP_032844688.1;Name=WP_032844688.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263265.1;locus_tag=JYJ20_RS11565;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_032844688.1;transl_table=11 NZ_JAFIRP010000038.1 RefSeq gene 3717 4532 . + . ID=gene-JYJ20_RS11570;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=JYJ20_RS11570 NZ_JAFIRP010000038.1 Protein Homology CDS 3717 4532 . + 0 ID=cds-WP_006250292.1;Parent=gene-JYJ20_RS11570;Dbxref=GenBank:WP_006250292.1;Name=WP_006250292.1;Ontology_term=GO:0019344,GO:0009001;gbkey=CDS;gene=cysE;go_function=L-serine O-acetyltransferase activity|0009001||IEA;go_process=L-cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674390.1;locus_tag=JYJ20_RS11570;product=serine O-acetyltransferase;protein_id=WP_006250292.1;transl_table=11 NZ_JAFIRP010000038.1 RefSeq gene 4737 5480 . + . ID=gene-JYJ20_RS11575;Name=JYJ20_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11575 NZ_JAFIRP010000038.1 Protein Homology CDS 4737 5480 . + 0 ID=cds-WP_209026276.1;Parent=gene-JYJ20_RS11575;Dbxref=GenBank:WP_209026276.1;Name=WP_209026276.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF014452.7;locus_tag=JYJ20_RS11575;product=S6 family peptidase;protein_id=WP_209026276.1;transl_table=11 NZ_JAFIRP010000038.1 RefSeq gene 5633 6508 . + . ID=gene-JYJ20_RS12430;Name=JYJ20_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12430 NZ_JAFIRP010000038.1 GeneMarkS-2+ CDS 5633 6508 . + 0 ID=cds-WP_425331227.1;Parent=gene-JYJ20_RS12430;Dbxref=GenBank:WP_425331227.1;Name=WP_425331227.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS12430;product=hypothetical protein;protein_id=WP_425331227.1;transl_table=11 NZ_JAFIRP010000038.1 RefSeq gene 6535 7707 . + . ID=gene-JYJ20_RS12390;Name=JYJ20_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12390 NZ_JAFIRP010000038.1 Protein Homology CDS 6535 7707 . + 0 ID=cds-WP_209026277.1;Parent=gene-JYJ20_RS12390;Dbxref=GenBank:WP_209026277.1;Name=WP_209026277.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF048731.2;locus_tag=JYJ20_RS12390;product=pertactin-like passenger domain-containing protein;protein_id=WP_209026277.1;transl_table=11 NZ_JAFIRP010000038.1 RefSeq gene 7662 8513 . + . ID=gene-JYJ20_RS11590;Name=JYJ20_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11590 NZ_JAFIRP010000038.1 Protein Homology CDS 7662 8513 . + 0 ID=cds-WP_249762483.1;Parent=gene-JYJ20_RS11590;Dbxref=GenBank:WP_249762483.1;Name=WP_249762483.1;Ontology_term=GO:0015474,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=autotransporter activity|0015474||IEA;inference=COORDINATES: protein motif:HMM:NF015737.7;locus_tag=JYJ20_RS11590;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_249762483.1;transl_table=11 ##sequence-region NZ_JAFIRP010000039.1 1 7565 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000039.1 RefSeq region 1 7565 . + . ID=NZ_JAFIRP010000039.1:1..7565;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000039.1 RefSeq gene 1 520 . - . ID=gene-JYJ20_RS11595;Name=JYJ20_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11595;partial=true;start_range=.,1 NZ_JAFIRP010000039.1 Protein Homology CDS 1 520 . - 0 ID=cds-WP_209026279.1;Parent=gene-JYJ20_RS11595;Dbxref=GenBank:WP_209026279.1;Name=WP_209026279.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249760.1;locus_tag=JYJ20_RS11595;partial=true;product=IS1595-like element ISMha2 family transposase;protein_id=WP_209026279.1;start_range=.,1;transl_table=11 NZ_JAFIRP010000039.1 RefSeq gene 629 4225 . - . ID=gene-JYJ20_RS11600;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=JYJ20_RS11600 NZ_JAFIRP010000039.1 Protein Homology CDS 629 4225 . - 0 ID=cds-WP_080869742.1;Parent=gene-JYJ20_RS11600;Dbxref=GenBank:WP_080869742.1;Name=WP_080869742.1;Ontology_term=GO:0006355,GO:0006562,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-proline catabolic process|0006562||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015431497.1;locus_tag=JYJ20_RS11600;product=bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA;protein_id=WP_080869742.1;transl_table=11 NZ_JAFIRP010000039.1 RefSeq gene 4345 5856 . - . ID=gene-JYJ20_RS11605;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=JYJ20_RS11605 NZ_JAFIRP010000039.1 Protein Homology CDS 4345 5856 . - 0 ID=cds-WP_006253407.1;Parent=gene-JYJ20_RS11605;Dbxref=GenBank:WP_006253407.1;Name=WP_006253407.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250850.1;locus_tag=JYJ20_RS11605;product=Na+/H+ antiporter NhaC;protein_id=WP_006253407.1;transl_table=11 NZ_JAFIRP010000039.1 RefSeq gene 5931 7121 . - . ID=gene-JYJ20_RS11610;Name=JYJ20_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11610 NZ_JAFIRP010000039.1 Protein Homology CDS 5931 7121 . - 0 ID=cds-WP_006253408.1;Parent=gene-JYJ20_RS11610;Dbxref=GenBank:WP_006253408.1;Name=WP_006253408.1;Ontology_term=GO:0004587,GO:0030170;gbkey=CDS;go_function=L-ornithine transaminase activity|0004587||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250849.1;locus_tag=JYJ20_RS11610;product=ornithine--oxo-acid transaminase;protein_id=WP_006253408.1;transl_table=11 NZ_JAFIRP010000039.1 RefSeq pseudogene 7373 7565 . - . ID=gene-JYJ20_RS11615;Name=JYJ20_RS11615;end_range=7565,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS11615;partial=true;pseudo=true NZ_JAFIRP010000039.1 Protein Homology CDS 7373 7565 . - 1 ID=cds-JYJ20_RS11615;Parent=gene-JYJ20_RS11615;Note=internal stop%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=7565,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_021111752.1;locus_tag=JYJ20_RS11615;partial=true;product=IS1595 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JAFIRP010000004.1 1 83047 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000004.1 RefSeq region 1 83047 . + . ID=NZ_JAFIRP010000004.1:1..83047;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000004.1 RefSeq pseudogene 53 532 . - . ID=gene-JYJ20_RS01915;Name=JYJ20_RS01915;end_range=532,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS01915;partial=true;pseudo=true;start_range=.,53 NZ_JAFIRP010000004.1 Protein Homology CDS 53 532 . - 0 ID=cds-JYJ20_RS01915;Parent=gene-JYJ20_RS01915;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016032,GO:0005198;end_range=532,.;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015587106.1;locus_tag=JYJ20_RS01915;partial=true;product=phage tail tape measure protein;pseudo=true;start_range=.,53;transl_table=11 NZ_JAFIRP010000004.1 RefSeq pseudogene 592 921 . + . ID=gene-JYJ20_RS01920;Name=JYJ20_RS01920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS01920;partial=true;pseudo=true;start_range=.,592 NZ_JAFIRP010000004.1 Protein Homology CDS 592 921 . + 0 ID=cds-JYJ20_RS01920;Parent=gene-JYJ20_RS01920;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005693492.1;locus_tag=JYJ20_RS01920;partial=true;product=S24 family peptidase;pseudo=true;start_range=.,592;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 1117 1317 . - . ID=gene-JYJ20_RS01925;Name=JYJ20_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01925 NZ_JAFIRP010000004.1 Protein Homology CDS 1117 1317 . - 0 ID=cds-WP_006249232.1;Parent=gene-JYJ20_RS01925;Dbxref=GenBank:WP_006249232.1;Name=WP_006249232.1;Ontology_term=GO:0097163;gbkey=CDS;go_function=sulfur carrier activity|0097163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249232.1;locus_tag=JYJ20_RS01925;product=sulfurtransferase TusA family protein;protein_id=WP_006249232.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 1376 1888 . - . ID=gene-JYJ20_RS01930;Name=JYJ20_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01930 NZ_JAFIRP010000004.1 Protein Homology CDS 1376 1888 . - 0 ID=cds-WP_006249233.1;Parent=gene-JYJ20_RS01930;Dbxref=GenBank:WP_006249233.1;Name=WP_006249233.1;Ontology_term=GO:0043169,GO:0046872;gbkey=CDS;go_function=cation binding|0043169||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249233.1;locus_tag=JYJ20_RS01930;product=hemerythrin domain-containing protein;protein_id=WP_006249233.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 1901 3055 . - . ID=gene-JYJ20_RS01935;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=JYJ20_RS01935 NZ_JAFIRP010000004.1 Protein Homology CDS 1901 3055 . - 0 ID=cds-WP_006249234.1;Parent=gene-JYJ20_RS01935;Dbxref=GenBank:WP_006249234.1;Name=WP_006249234.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249234.1;locus_tag=JYJ20_RS01935;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_006249234.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 3114 3254 . - . ID=gene-JYJ20_RS01940;Name=JYJ20_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01940 NZ_JAFIRP010000004.1 Protein Homology CDS 3114 3254 . - 0 ID=cds-WP_006250932.1;Parent=gene-JYJ20_RS01940;Dbxref=GenBank:WP_006250932.1;Name=WP_006250932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250932.1;locus_tag=JYJ20_RS01940;product=hypothetical protein;protein_id=WP_006250932.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 3348 3920 . + . ID=gene-JYJ20_RS01945;Name=JYJ20_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01945 NZ_JAFIRP010000004.1 Protein Homology CDS 3348 3920 . + 0 ID=cds-WP_006253418.1;Parent=gene-JYJ20_RS01945;Dbxref=GenBank:WP_006253418.1;Name=WP_006253418.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250931.1;locus_tag=JYJ20_RS01945;product=YceB family lipoprotein;protein_id=WP_006253418.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 4022 4240 . + . ID=gene-JYJ20_RS01950;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=JYJ20_RS01950 NZ_JAFIRP010000004.1 Protein Homology CDS 4022 4240 . + 0 ID=cds-WP_006250930.1;Parent=gene-JYJ20_RS01950;Dbxref=GenBank:WP_006250930.1;Name=WP_006250930.1;Ontology_term=GO:0006355,GO:0003676,GO:0005737;gbkey=CDS;gene=cspD;go_component=cytoplasm|0005737||IEA;go_function=nucleic acid binding|0003676||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250930.1;locus_tag=JYJ20_RS01950;product=cold shock domain-containing protein CspD;protein_id=WP_006250930.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 4330 5244 . + . ID=gene-JYJ20_RS01955;Name=JYJ20_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01955 NZ_JAFIRP010000004.1 Protein Homology CDS 4330 5244 . + 0 ID=cds-WP_134916659.1;Parent=gene-JYJ20_RS01955;Dbxref=GenBank:WP_134916659.1;Name=WP_134916659.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013088.7;locus_tag=JYJ20_RS01955;product=DMT family transporter;protein_id=WP_134916659.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 5363 6223 . + . ID=gene-JYJ20_RS01960;Name=araC;gbkey=Gene;gene=araC;gene_biotype=protein_coding;locus_tag=JYJ20_RS01960 NZ_JAFIRP010000004.1 Protein Homology CDS 5363 6223 . + 0 ID=cds-WP_006249430.1;Parent=gene-JYJ20_RS01960;Dbxref=GenBank:WP_006249430.1;Name=WP_006249430.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=araC;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250927.1;locus_tag=JYJ20_RS01960;product=arabinose operon transcriptional regulator AraC;protein_id=WP_006249430.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 6410 7384 . + . ID=gene-JYJ20_RS01965;Name=JYJ20_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01965 NZ_JAFIRP010000004.1 Protein Homology CDS 6410 7384 . + 0 ID=cds-WP_006253415.1;Parent=gene-JYJ20_RS01965;Dbxref=GenBank:WP_006253415.1;Name=WP_006253415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253415.1;locus_tag=JYJ20_RS01965;product=substrate-binding domain-containing protein;protein_id=WP_006253415.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 7439 8929 . + . ID=gene-JYJ20_RS01970;Name=JYJ20_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01970 NZ_JAFIRP010000004.1 Protein Homology CDS 7439 8929 . + 0 ID=cds-WP_209025949.1;Parent=gene-JYJ20_RS01970;Dbxref=GenBank:WP_209025949.1;Name=WP_209025949.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249432.1;locus_tag=JYJ20_RS01970;product=sugar ABC transporter ATP-binding protein;protein_id=WP_209025949.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 8913 9872 . + . ID=gene-JYJ20_RS01975;Name=JYJ20_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01975 NZ_JAFIRP010000004.1 Protein Homology CDS 8913 9872 . + 0 ID=cds-WP_006249433.1;Parent=gene-JYJ20_RS01975;Dbxref=GenBank:WP_006249433.1;Name=WP_006249433.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249433.1;locus_tag=JYJ20_RS01975;product=ABC transporter permease;protein_id=WP_006249433.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 9875 10825 . + . ID=gene-JYJ20_RS01980;Name=JYJ20_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01980 NZ_JAFIRP010000004.1 Protein Homology CDS 9875 10825 . + 0 ID=cds-WP_209025950.1;Parent=gene-JYJ20_RS01980;Dbxref=GenBank:WP_209025950.1;Name=WP_209025950.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250925.1;locus_tag=JYJ20_RS01980;product=ABC transporter permease;protein_id=WP_209025950.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 10838 12433 . + . ID=gene-JYJ20_RS01985;Name=JYJ20_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS01985 NZ_JAFIRP010000004.1 Protein Homology CDS 10838 12433 . + 0 ID=cds-WP_021279927.1;Parent=gene-JYJ20_RS01985;Dbxref=GenBank:WP_021279927.1;Name=WP_021279927.1;Ontology_term=GO:0005998,GO:0042732,GO:0004856,GO:0005524;gbkey=CDS;go_function=D-xylulokinase activity|0004856||IEA,ATP binding|0005524||IEA;go_process=xylulose catabolic process|0005998||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015587080.1;locus_tag=JYJ20_RS01985;product=xylulokinase;protein_id=WP_021279927.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 12657 13859 . + . ID=gene-JYJ20_RS01990;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=JYJ20_RS01990 NZ_JAFIRP010000004.1 Protein Homology CDS 12657 13859 . + 0 ID=cds-WP_209025951.1;Parent=gene-JYJ20_RS01990;Dbxref=GenBank:WP_209025951.1;Name=WP_209025951.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250923.1;locus_tag=JYJ20_RS01990;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_209025951.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 13900 14169 . + . ID=gene-JYJ20_RS01995;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=JYJ20_RS01995 NZ_JAFIRP010000004.1 Protein Homology CDS 13900 14169 . + 0 ID=cds-WP_006250922.1;Parent=gene-JYJ20_RS01995;Dbxref=GenBank:WP_006250922.1;Name=WP_006250922.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007241376.1;locus_tag=JYJ20_RS01995;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_006250922.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 14270 14614 . + . ID=gene-JYJ20_RS02000;Name=JYJ20_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02000 NZ_JAFIRP010000004.1 Protein Homology CDS 14270 14614 . + 0 ID=cds-WP_006249437.1;Parent=gene-JYJ20_RS02000;Dbxref=GenBank:WP_006249437.1;Name=WP_006249437.1;Ontology_term=GO:0046677,GO:0071555,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_process=response to antibiotic|0046677||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249437.1;locus_tag=JYJ20_RS02000;product=VanZ family protein;protein_id=WP_006249437.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 14677 15624 . - . ID=gene-JYJ20_RS02005;Name=JYJ20_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02005 NZ_JAFIRP010000004.1 Protein Homology CDS 14677 15624 . - 0 ID=cds-WP_209025952.1;Parent=gene-JYJ20_RS02005;Dbxref=GenBank:WP_209025952.1;Name=WP_209025952.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250920.1;locus_tag=JYJ20_RS02005;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_209025952.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 15807 19937 . + . ID=gene-JYJ20_RS02010;Name=JYJ20_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02010 NZ_JAFIRP010000004.1 Protein Homology CDS 15807 19937 . + 0 ID=cds-WP_245155370.1;Parent=gene-JYJ20_RS02010;Dbxref=GenBank:WP_245155370.1;Name=WP_245155370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005821035.1;locus_tag=JYJ20_RS02010;product=NACHT domain-containing protein;protein_id=WP_245155370.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 19956 20666 . + . ID=gene-JYJ20_RS02015;Name=JYJ20_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02015 NZ_JAFIRP010000004.1 Protein Homology CDS 19956 20666 . + 0 ID=cds-WP_006249441.1;Parent=gene-JYJ20_RS02015;Dbxref=GenBank:WP_006249441.1;Name=WP_006249441.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249441.1;locus_tag=JYJ20_RS02015;product=LysR family transcriptional regulator;protein_id=WP_006249441.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 20635 20817 . + . ID=gene-JYJ20_RS12330;Name=JYJ20_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12330 NZ_JAFIRP010000004.1 Protein Homology CDS 20635 20817 . + 0 ID=cds-WP_158001578.1;Parent=gene-JYJ20_RS12330;Dbxref=GenBank:WP_158001578.1;Name=WP_158001578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484297.1;locus_tag=JYJ20_RS12330;product=type 2 periplasmic-binding domain-containing protein;protein_id=WP_158001578.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 20890 21339 . - . ID=gene-JYJ20_RS02025;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=JYJ20_RS02025 NZ_JAFIRP010000004.1 Protein Homology CDS 20890 21339 . - 0 ID=cds-WP_006249443.1;Parent=gene-JYJ20_RS02025;Dbxref=GenBank:WP_006249443.1;Name=WP_006249443.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651946.1;locus_tag=JYJ20_RS02025;product=transcriptional regulator NrdR;protein_id=WP_006249443.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 21339 21644 . - . ID=gene-JYJ20_RS02030;Name=JYJ20_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02030 NZ_JAFIRP010000004.1 Protein Homology CDS 21339 21644 . - 0 ID=cds-WP_006250700.1;Parent=gene-JYJ20_RS02030;Dbxref=GenBank:WP_006250700.1;Name=WP_006250700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250700.1;locus_tag=JYJ20_RS02030;product=YcgL domain-containing protein;protein_id=WP_006250700.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 21634 23097 . - . ID=gene-JYJ20_RS02035;Name=JYJ20_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02035 NZ_JAFIRP010000004.1 Protein Homology CDS 21634 23097 . - 0 ID=cds-WP_134916654.1;Parent=gene-JYJ20_RS02035;Dbxref=GenBank:WP_134916654.1;Name=WP_134916654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250701.1;locus_tag=JYJ20_RS02035;product=replicative DNA helicase;protein_id=WP_134916654.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 23271 24170 . + . ID=gene-JYJ20_RS02040;Name=JYJ20_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02040 NZ_JAFIRP010000004.1 Protein Homology CDS 23271 24170 . + 0 ID=cds-WP_006249446.1;Parent=gene-JYJ20_RS02040;Dbxref=GenBank:WP_006249446.1;Name=WP_006249446.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249446.1;locus_tag=JYJ20_RS02040;product=siderophore ABC transporter substrate-binding protein;protein_id=WP_006249446.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 24264 25232 . + . ID=gene-JYJ20_RS02045;Name=JYJ20_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02045 NZ_JAFIRP010000004.1 Protein Homology CDS 24264 25232 . + 0 ID=cds-WP_015484299.1;Parent=gene-JYJ20_RS02045;Dbxref=GenBank:WP_015484299.1;Name=WP_015484299.1;Ontology_term=GO:0006826,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484299.1;locus_tag=JYJ20_RS02045;product=ABC transporter permease;protein_id=WP_015484299.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 25285 26163 . + . ID=gene-JYJ20_RS02050;Name=JYJ20_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02050 NZ_JAFIRP010000004.1 Protein Homology CDS 25285 26163 . + 0 ID=cds-WP_173391246.1;Parent=gene-JYJ20_RS02050;Dbxref=GenBank:WP_173391246.1;Name=WP_173391246.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005545884.1;locus_tag=JYJ20_RS02050;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_173391246.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 26183 26941 . + . ID=gene-JYJ20_RS02055;Name=JYJ20_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02055 NZ_JAFIRP010000004.1 Protein Homology CDS 26183 26941 . + 0 ID=cds-WP_006249448.1;Parent=gene-JYJ20_RS02055;Dbxref=GenBank:WP_006249448.1;Name=WP_006249448.1;Ontology_term=GO:0006826,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604228.1;locus_tag=JYJ20_RS02055;product=iron ABC transporter ATP-binding protein;protein_id=WP_006249448.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 27118 29685 . - . ID=gene-JYJ20_RS02060;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=JYJ20_RS02060 NZ_JAFIRP010000004.1 Protein Homology CDS 27118 29685 . - 0 ID=cds-WP_006249449.1;Parent=gene-JYJ20_RS02060;Dbxref=GenBank:WP_006249449.1;Name=WP_006249449.1;gbkey=CDS;gene=glnD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249449.1;locus_tag=JYJ20_RS02060;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_006249449.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 29797 30774 . + . ID=gene-JYJ20_RS02065;Name=JYJ20_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02065 NZ_JAFIRP010000004.1 Protein Homology CDS 29797 30774 . + 0 ID=cds-WP_006252762.1;Parent=gene-JYJ20_RS02065;Dbxref=GenBank:WP_006252762.1;Name=WP_006252762.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252762.1;locus_tag=JYJ20_RS02065;product=calcium/sodium antiporter;protein_id=WP_006252762.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 30831 31913 . - . ID=gene-JYJ20_RS02070;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=JYJ20_RS02070 NZ_JAFIRP010000004.1 Protein Homology CDS 30831 31913 . - 0 ID=cds-WP_209025953.1;Parent=gene-JYJ20_RS02070;Dbxref=GenBank:WP_209025953.1;Name=WP_209025953.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate transaminase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249451.1;locus_tag=JYJ20_RS02070;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_209025953.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 32245 32925 . + . ID=gene-JYJ20_RS02075;Name=JYJ20_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02075 NZ_JAFIRP010000004.1 Protein Homology CDS 32245 32925 . + 0 ID=cds-WP_006249453.1;Parent=gene-JYJ20_RS02075;Dbxref=GenBank:WP_006249453.1;Name=WP_006249453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007523984.1;locus_tag=JYJ20_RS02075;product=TIGR00153 family protein;protein_id=WP_006249453.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 32937 34205 . + . ID=gene-JYJ20_RS02080;Name=JYJ20_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02080 NZ_JAFIRP010000004.1 Protein Homology CDS 32937 34205 . + 0 ID=cds-WP_006249454.1;Parent=gene-JYJ20_RS02080;Dbxref=GenBank:WP_006249454.1;Name=WP_006249454.1;Ontology_term=GO:0006817,GO:0005315,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597096.1;locus_tag=JYJ20_RS02080;product=inorganic phosphate transporter;protein_id=WP_006249454.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 34260 34871 . + . ID=gene-JYJ20_RS02085;Name=JYJ20_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02085 NZ_JAFIRP010000004.1 Protein Homology CDS 34260 34871 . + 0 ID=cds-WP_006249455.1;Parent=gene-JYJ20_RS02085;Dbxref=GenBank:WP_006249455.1;Name=WP_006249455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991435.1;locus_tag=JYJ20_RS02085;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_006249455.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 34925 36223 . - . ID=gene-JYJ20_RS02090;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=JYJ20_RS02090 NZ_JAFIRP010000004.1 Protein Homology CDS 34925 36223 . - 0 ID=cds-WP_006252761.1;Parent=gene-JYJ20_RS02090;Dbxref=GenBank:WP_006252761.1;Name=WP_006252761.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250709.1;locus_tag=JYJ20_RS02090;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_006252761.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 36269 37363 . - . ID=gene-JYJ20_RS02095;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=JYJ20_RS02095 NZ_JAFIRP010000004.1 Protein Homology CDS 36269 37363 . - 0 ID=cds-WP_006249457.1;Parent=gene-JYJ20_RS02095;Dbxref=GenBank:WP_006249457.1;Name=WP_006249457.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=L-histidinol-phosphate:2-oxoglutarate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249457.1;locus_tag=JYJ20_RS02095;product=histidinol-phosphate transaminase;protein_id=WP_006249457.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 37635 38954 . + . ID=gene-JYJ20_RS02100;Name=JYJ20_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02100 NZ_JAFIRP010000004.1 Protein Homology CDS 37635 38954 . + 0 ID=cds-WP_006249459.1;Parent=gene-JYJ20_RS02100;Dbxref=GenBank:WP_006249459.1;Name=WP_006249459.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249459.1;locus_tag=JYJ20_RS02100;product=uracil-xanthine permease family protein;protein_id=WP_006249459.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 39124 41067 . - . ID=gene-JYJ20_RS02105;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=JYJ20_RS02105 NZ_JAFIRP010000004.1 Protein Homology CDS 39124 41067 . - 0 ID=cds-WP_006249460.1;Parent=gene-JYJ20_RS02105;Dbxref=GenBank:WP_006249460.1;Name=WP_006249460.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250711.1;locus_tag=JYJ20_RS02105;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_006249460.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 41188 41814 . - . ID=gene-JYJ20_RS02110;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=JYJ20_RS02110 NZ_JAFIRP010000004.1 Protein Homology CDS 41188 41814 . - 0 ID=cds-WP_006249461.1;Parent=gene-JYJ20_RS02110;Dbxref=GenBank:WP_006249461.1;Name=WP_006249461.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011200140.1;locus_tag=JYJ20_RS02110;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_006249461.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq pseudogene 41935 42583 . - . ID=gene-JYJ20_RS02115;Name=JYJ20_RS02115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS02115;pseudo=true NZ_JAFIRP010000004.1 Protein Homology CDS 41935 42583 . - 0 ID=cds-JYJ20_RS02115;Parent=gene-JYJ20_RS02115;Note=frameshifted;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248253.1;locus_tag=JYJ20_RS02115;product=IS1595-like element ISMha4 family transposase;pseudo=true;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 42885 44249 . + . ID=gene-JYJ20_RS02120;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=JYJ20_RS02120 NZ_JAFIRP010000004.1 Protein Homology CDS 42885 44249 . + 0 ID=cds-WP_209025954.1;Parent=gene-JYJ20_RS02120;Dbxref=GenBank:WP_209025954.1;Name=WP_209025954.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262868.1;locus_tag=JYJ20_RS02120;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_209025954.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 44402 45520 . - . ID=gene-JYJ20_RS02125;Name=JYJ20_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02125 NZ_JAFIRP010000004.1 Protein Homology CDS 44402 45520 . - 0 ID=cds-WP_041447894.1;Parent=gene-JYJ20_RS02125;Dbxref=GenBank:WP_041447894.1;Name=WP_041447894.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249464.1;locus_tag=JYJ20_RS02125;product=porin;protein_id=WP_041447894.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 46025 46543 . + . ID=gene-JYJ20_RS02130;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=JYJ20_RS02130 NZ_JAFIRP010000004.1 Protein Homology CDS 46025 46543 . + 0 ID=cds-WP_006250212.1;Parent=gene-JYJ20_RS02130;Dbxref=GenBank:WP_006250212.1;Name=WP_006250212.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253128.1;locus_tag=JYJ20_RS02130;product=primosomal replication protein PriC;protein_id=WP_006250212.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 46547 46620 . - . ID=gene-JYJ20_RS02135;Name=JYJ20_RS02135;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS02135 NZ_JAFIRP010000004.1 tRNAscan-SE tRNA 46547 46620 . - . ID=rna-JYJ20_RS02135;Parent=gene-JYJ20_RS02135;anticodon=(pos:complement(46586..46588));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS02135;product=tRNA-Cys NZ_JAFIRP010000004.1 tRNAscan-SE exon 46547 46620 . - . ID=exon-JYJ20_RS02135-1;Parent=rna-JYJ20_RS02135;anticodon=(pos:complement(46586..46588));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS02135;product=tRNA-Cys NZ_JAFIRP010000004.1 RefSeq gene 46636 46711 . - . ID=gene-JYJ20_RS02140;Name=JYJ20_RS02140;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS02140 NZ_JAFIRP010000004.1 tRNAscan-SE tRNA 46636 46711 . - . ID=rna-JYJ20_RS02140;Parent=gene-JYJ20_RS02140;anticodon=(pos:complement(46676..46678));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS02140;product=tRNA-Gly NZ_JAFIRP010000004.1 tRNAscan-SE exon 46636 46711 . - . ID=exon-JYJ20_RS02140-1;Parent=rna-JYJ20_RS02140;anticodon=(pos:complement(46676..46678));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS02140;product=tRNA-Gly NZ_JAFIRP010000004.1 RefSeq gene 46921 48345 . - . ID=gene-JYJ20_RS02145;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=JYJ20_RS02145 NZ_JAFIRP010000004.1 Protein Homology CDS 46921 48345 . - 0 ID=cds-WP_006250214.1;Parent=gene-JYJ20_RS02145;Dbxref=GenBank:WP_006250214.1;Name=WP_006250214.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011272714.1;locus_tag=JYJ20_RS02145;product=dihydrolipoyl dehydrogenase;protein_id=WP_006250214.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 48545 50455 . - . ID=gene-JYJ20_RS02150;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=JYJ20_RS02150 NZ_JAFIRP010000004.1 Protein Homology CDS 48545 50455 . - 0 ID=cds-WP_006250216.1;Parent=gene-JYJ20_RS02150;Dbxref=GenBank:WP_006250216.1;Name=WP_006250216.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618949.1;locus_tag=JYJ20_RS02150;product=pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_006250216.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 50659 53316 . - . ID=gene-JYJ20_RS02155;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=JYJ20_RS02155 NZ_JAFIRP010000004.1 Protein Homology CDS 50659 53316 . - 0 ID=cds-WP_006250217.1;Parent=gene-JYJ20_RS02155;Dbxref=GenBank:WP_006250217.1;Name=WP_006250217.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005628834.1;locus_tag=JYJ20_RS02155;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_006250217.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 53680 54690 . - . ID=gene-JYJ20_RS02160;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=JYJ20_RS02160 NZ_JAFIRP010000004.1 Protein Homology CDS 53680 54690 . - 0 ID=cds-WP_006250219.1;Parent=gene-JYJ20_RS02160;Dbxref=GenBank:WP_006250219.1;Name=WP_006250219.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250219.1;locus_tag=JYJ20_RS02160;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_006250219.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 54769 55719 . - . ID=gene-JYJ20_RS02165;Name=JYJ20_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02165 NZ_JAFIRP010000004.1 Protein Homology CDS 54769 55719 . - 0 ID=cds-WP_006250220.1;Parent=gene-JYJ20_RS02165;Dbxref=GenBank:WP_006250220.1;Name=WP_006250220.1;Ontology_term=GO:0006015,GO:0009156,GO:0009165,GO:0016310,GO:0000287,GO:0004749,GO:0005524,GO:0016301,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,ribose phosphate diphosphokinase activity|0004749||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA,ribonucleoside monophosphate biosynthetic process|0009156||IEA,nucleotide biosynthetic process|0009165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945436.1;locus_tag=JYJ20_RS02165;product=ribose-phosphate pyrophosphokinase;protein_id=WP_006250220.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 55745 56599 . - . ID=gene-JYJ20_RS02170;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=JYJ20_RS02170 NZ_JAFIRP010000004.1 Protein Homology CDS 55745 56599 . - 0 ID=cds-WP_015484305.1;Parent=gene-JYJ20_RS02170;Dbxref=GenBank:WP_015484305.1;Name=WP_015484305.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484305.1;locus_tag=JYJ20_RS02170;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_015484305.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 56587 57219 . - . ID=gene-JYJ20_RS02175;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=JYJ20_RS02175 NZ_JAFIRP010000004.1 Protein Homology CDS 56587 57219 . - 0 ID=cds-WP_006250183.1;Parent=gene-JYJ20_RS02175;Dbxref=GenBank:WP_006250183.1;Name=WP_006250183.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597216.1;locus_tag=JYJ20_RS02175;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_006250183.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 57308 59071 . - . ID=gene-JYJ20_RS02180;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=JYJ20_RS02180 NZ_JAFIRP010000004.1 Protein Homology CDS 57308 59071 . - 0 ID=cds-WP_006250184.1;Parent=gene-JYJ20_RS02180;Dbxref=GenBank:WP_006250184.1;Name=WP_006250184.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250184.1;locus_tag=JYJ20_RS02180;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_006250184.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 59155 59841 . - . ID=gene-JYJ20_RS02185;Name=JYJ20_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02185 NZ_JAFIRP010000004.1 Protein Homology CDS 59155 59841 . - 0 ID=cds-WP_006253134.1;Parent=gene-JYJ20_RS02185;Dbxref=GenBank:WP_006253134.1;Name=WP_006253134.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597218.1;locus_tag=JYJ20_RS02185;product=LrgB family protein;protein_id=WP_006253134.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 59843 60208 . - . ID=gene-JYJ20_RS02190;Name=JYJ20_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02190 NZ_JAFIRP010000004.1 Protein Homology CDS 59843 60208 . - 0 ID=cds-WP_006250186.1;Parent=gene-JYJ20_RS02190;Dbxref=GenBank:WP_006250186.1;Name=WP_006250186.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250186.1;locus_tag=JYJ20_RS02190;product=CidA/LrgA family protein;protein_id=WP_006250186.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 60282 62207 . - . ID=gene-JYJ20_RS02195;Name=yoaA;gbkey=Gene;gene=yoaA;gene_biotype=protein_coding;locus_tag=JYJ20_RS02195 NZ_JAFIRP010000004.1 Protein Homology CDS 60282 62207 . - 0 ID=cds-WP_006253495.1;Parent=gene-JYJ20_RS02195;Dbxref=GenBank:WP_006253495.1;Name=WP_006253495.1;Ontology_term=GO:0006281;gbkey=CDS;gene=yoaA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250506.1;locus_tag=JYJ20_RS02195;product=DNA repair helicase YoaA;protein_id=WP_006253495.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 62390 62611 . - . ID=gene-JYJ20_RS02200;Name=JYJ20_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02200 NZ_JAFIRP010000004.1 Protein Homology CDS 62390 62611 . - 0 ID=cds-WP_006250508.1;Parent=gene-JYJ20_RS02200;Dbxref=GenBank:WP_006250508.1;Name=WP_006250508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250508.1;locus_tag=JYJ20_RS02200;product=hypothetical protein;protein_id=WP_006250508.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 62698 63495 . - . ID=gene-JYJ20_RS02205;Name=JYJ20_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02205 NZ_JAFIRP010000004.1 Protein Homology CDS 62698 63495 . - 0 ID=cds-WP_006253494.1;Parent=gene-JYJ20_RS02205;Dbxref=GenBank:WP_006253494.1;Name=WP_006253494.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015432965.1;locus_tag=JYJ20_RS02205;product=ABC transporter ATP-binding protein;protein_id=WP_006253494.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 63497 64429 . - . ID=gene-JYJ20_RS02210;Name=JYJ20_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02210 NZ_JAFIRP010000004.1 Protein Homology CDS 63497 64429 . - 0 ID=cds-WP_006249414.1;Parent=gene-JYJ20_RS02210;Dbxref=GenBank:WP_006249414.1;Name=WP_006249414.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253136.1;locus_tag=JYJ20_RS02210;product=ABC transporter permease;protein_id=WP_006249414.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 64671 66404 . + . ID=gene-JYJ20_RS02215;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=JYJ20_RS02215 NZ_JAFIRP010000004.1 Protein Homology CDS 64671 66404 . + 0 ID=cds-WP_209025955.1;Parent=gene-JYJ20_RS02215;Dbxref=GenBank:WP_209025955.1;Name=WP_209025955.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253137.1;locus_tag=JYJ20_RS02215;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_209025955.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 66496 69324 . - . ID=gene-JYJ20_RS02220;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=JYJ20_RS02220 NZ_JAFIRP010000004.1 Protein Homology CDS 66496 69324 . - 0 ID=cds-WP_006253492.1;Parent=gene-JYJ20_RS02220;Dbxref=GenBank:WP_006253492.1;Name=WP_006253492.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612043.1;locus_tag=JYJ20_RS02220;product=excinuclease ABC subunit UvrA;protein_id=WP_006253492.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 69479 69994 . + . ID=gene-JYJ20_RS02225;Name=JYJ20_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02225 NZ_JAFIRP010000004.1 Protein Homology CDS 69479 69994 . + 0 ID=cds-WP_006253491.1;Parent=gene-JYJ20_RS02225;Dbxref=GenBank:WP_006253491.1;Name=WP_006253491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651074.1;locus_tag=JYJ20_RS02225;product=single-stranded DNA-binding protein;protein_id=WP_006253491.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 70323 70408 . - . ID=gene-JYJ20_RS02230;Name=JYJ20_RS02230;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS02230 NZ_JAFIRP010000004.1 tRNAscan-SE tRNA 70323 70408 . - . ID=rna-JYJ20_RS02230;Parent=gene-JYJ20_RS02230;anticodon=(pos:complement(70372..70374));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS02230;product=tRNA-Leu NZ_JAFIRP010000004.1 tRNAscan-SE exon 70323 70408 . - . ID=exon-JYJ20_RS02230-1;Parent=rna-JYJ20_RS02230;anticodon=(pos:complement(70372..70374));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS02230;product=tRNA-Leu NZ_JAFIRP010000004.1 RefSeq gene 70628 72088 . - . ID=gene-JYJ20_RS02235;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=JYJ20_RS02235 NZ_JAFIRP010000004.1 Protein Homology CDS 70628 72088 . - 0 ID=cds-WP_015587093.1;Parent=gene-JYJ20_RS02235;Dbxref=GenBank:WP_015587093.1;Name=WP_015587093.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015587093.1;locus_tag=JYJ20_RS02235;product=exodeoxyribonuclease VII large subunit;protein_id=WP_015587093.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 72239 72315 . - . ID=gene-JYJ20_RS02240;Name=JYJ20_RS02240;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS02240 NZ_JAFIRP010000004.1 tRNAscan-SE tRNA 72239 72315 . - . ID=rna-JYJ20_RS02240;Parent=gene-JYJ20_RS02240;anticodon=(pos:complement(72279..72281));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS02240;product=tRNA-Met NZ_JAFIRP010000004.1 tRNAscan-SE exon 72239 72315 . - . ID=exon-JYJ20_RS02240-1;Parent=rna-JYJ20_RS02240;anticodon=(pos:complement(72279..72281));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS02240;product=tRNA-Met NZ_JAFIRP010000004.1 RefSeq gene 72525 73631 . + . ID=gene-JYJ20_RS02245;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=JYJ20_RS02245 NZ_JAFIRP010000004.1 Protein Homology CDS 72525 73631 . + 0 ID=cds-WP_006248848.1;Parent=gene-JYJ20_RS02245;Dbxref=GenBank:WP_006248848.1;Name=WP_006248848.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597277.1;locus_tag=JYJ20_RS02245;product=murein transglycosylase A;protein_id=WP_006248848.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 73644 74093 . + . ID=gene-JYJ20_RS02250;Name=JYJ20_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02250 NZ_JAFIRP010000004.1 Protein Homology CDS 73644 74093 . + 0 ID=cds-WP_006248847.1;Parent=gene-JYJ20_RS02250;Dbxref=GenBank:WP_006248847.1;Name=WP_006248847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248847.1;locus_tag=JYJ20_RS02250;product=DUF5358 family protein;protein_id=WP_006248847.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 74127 75644 . - . ID=gene-JYJ20_RS02255;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=JYJ20_RS02255 NZ_JAFIRP010000004.1 Protein Homology CDS 74127 75644 . - 0 ID=cds-WP_209025956.1;Parent=gene-JYJ20_RS02255;Dbxref=GenBank:WP_209025956.1;Name=WP_209025956.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005647425.1;locus_tag=JYJ20_RS02255;product=amidophosphoribosyltransferase;protein_id=WP_209025956.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 75659 76162 . - . ID=gene-JYJ20_RS02260;Name=JYJ20_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02260 NZ_JAFIRP010000004.1 Protein Homology CDS 75659 76162 . - 0 ID=cds-WP_006248845.1;Parent=gene-JYJ20_RS02260;Dbxref=GenBank:WP_006248845.1;Name=WP_006248845.1;Ontology_term=GO:0009403,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=toxin biosynthetic process|0009403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651805.1;locus_tag=JYJ20_RS02260;product=CvpA family protein;protein_id=WP_006248845.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 76307 76768 . - . ID=gene-JYJ20_RS02265;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=JYJ20_RS02265 NZ_JAFIRP010000004.1 Protein Homology CDS 76307 76768 . - 0 ID=cds-WP_031192856.1;Parent=gene-JYJ20_RS02265;Dbxref=GenBank:WP_031192856.1;Name=WP_031192856.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991275.1;locus_tag=JYJ20_RS02265;product=ribonuclease HI;protein_id=WP_031192856.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 76861 78192 . - . ID=gene-JYJ20_RS02270;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=JYJ20_RS02270 NZ_JAFIRP010000004.1 Protein Homology CDS 76861 78192 . - 0 ID=cds-WP_006248842.1;Parent=gene-JYJ20_RS02270;Dbxref=GenBank:WP_006248842.1;Name=WP_006248842.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018355938.1;locus_tag=JYJ20_RS02270;product=argininosuccinate synthase;protein_id=WP_006248842.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 78376 79416 . + . ID=gene-JYJ20_RS02275;Name=JYJ20_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02275 NZ_JAFIRP010000004.1 Protein Homology CDS 78376 79416 . + 0 ID=cds-WP_209025957.1;Parent=gene-JYJ20_RS02275;Dbxref=GenBank:WP_209025957.1;Name=WP_209025957.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248841.1;locus_tag=JYJ20_RS02275;product=glycosyltransferase family 9 protein;protein_id=WP_209025957.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 79481 80239 . - . ID=gene-JYJ20_RS02280;Name=JYJ20_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02280 NZ_JAFIRP010000004.1 Protein Homology CDS 79481 80239 . - 0 ID=cds-WP_006248840.1;Parent=gene-JYJ20_RS02280;Dbxref=GenBank:WP_006248840.1;Name=WP_006248840.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248840.1;locus_tag=JYJ20_RS02280;product=glycosyltransferase family 2 protein;protein_id=WP_006248840.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 80366 80680 . + . ID=gene-JYJ20_RS02285;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=JYJ20_RS02285 NZ_JAFIRP010000004.1 Protein Homology CDS 80366 80680 . + 0 ID=cds-WP_006248838.1;Parent=gene-JYJ20_RS02285;Dbxref=GenBank:WP_006248838.1;Name=WP_006248838.1;Ontology_term=GO:0003723;gbkey=CDS;gene=yhbY;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010786380.1;locus_tag=JYJ20_RS02285;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_006248838.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 80741 81463 . + . ID=gene-JYJ20_RS02290;Name=JYJ20_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02290 NZ_JAFIRP010000004.1 Protein Homology CDS 80741 81463 . + 0 ID=cds-WP_006253614.1;Parent=gene-JYJ20_RS02290;Dbxref=GenBank:WP_006253614.1;Name=WP_006253614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253614.1;locus_tag=JYJ20_RS02290;product=phosphatase PAP2 family protein;protein_id=WP_006253614.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 81532 81693 . + . ID=gene-JYJ20_RS02295;Name=JYJ20_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02295 NZ_JAFIRP010000004.1 Protein Homology CDS 81532 81693 . + 0 ID=cds-WP_006248836.1;Parent=gene-JYJ20_RS02295;Dbxref=GenBank:WP_006248836.1;Name=WP_006248836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248836.1;locus_tag=JYJ20_RS02295;product=hypothetical protein;protein_id=WP_006248836.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 81701 82063 . + . ID=gene-JYJ20_RS02300;Name=JYJ20_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02300 NZ_JAFIRP010000004.1 Protein Homology CDS 81701 82063 . + 0 ID=cds-WP_006248835.1;Parent=gene-JYJ20_RS02300;Dbxref=GenBank:WP_006248835.1;Name=WP_006248835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251557.1;locus_tag=JYJ20_RS02300;product=hypothetical protein;protein_id=WP_006248835.1;transl_table=11 NZ_JAFIRP010000004.1 RefSeq gene 82076 82993 . + . ID=gene-JYJ20_RS02305;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=JYJ20_RS02305 NZ_JAFIRP010000004.1 Protein Homology CDS 82076 82993 . + 0 ID=cds-WP_006248834.1;Parent=gene-JYJ20_RS02305;Dbxref=GenBank:WP_006248834.1;Name=WP_006248834.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005708433.1;locus_tag=JYJ20_RS02305;product=N-acetylglucosamine kinase;protein_id=WP_006248834.1;transl_table=11 ##sequence-region NZ_JAFIRP010000040.1 1 39838 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000040.1 RefSeq region 1 39838 . + . ID=NZ_JAFIRP010000040.1:1..39838;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000040.1 RefSeq gene 170 646 . - . ID=gene-JYJ20_RS11620;Name=JYJ20_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11620 NZ_JAFIRP010000040.1 Protein Homology CDS 170 646 . - 0 ID=cds-WP_006250153.1;Parent=gene-JYJ20_RS11620;Dbxref=GenBank:WP_006250153.1;Name=WP_006250153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253428.1;locus_tag=JYJ20_RS11620;product=hypothetical protein;protein_id=WP_006250153.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 791 1375 . - . ID=gene-JYJ20_RS11625;Name=JYJ20_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11625 NZ_JAFIRP010000040.1 Protein Homology CDS 791 1375 . - 0 ID=cds-WP_209026280.1;Parent=gene-JYJ20_RS11625;Dbxref=GenBank:WP_209026280.1;Name=WP_209026280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250154.1;locus_tag=JYJ20_RS11625;product=hypothetical protein;protein_id=WP_209026280.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 1377 2513 . - . ID=gene-JYJ20_RS11630;Name=JYJ20_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11630 NZ_JAFIRP010000040.1 Protein Homology CDS 1377 2513 . - 0 ID=cds-WP_015484635.1;Parent=gene-JYJ20_RS11630;Dbxref=GenBank:WP_015484635.1;Name=WP_015484635.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250155.1;locus_tag=JYJ20_RS11630;product=type II secretion system protein GspD;protein_id=WP_015484635.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq pseudogene 2510 3543 . - . ID=gene-JYJ20_RS12490;Name=JYJ20_RS12490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS12490;pseudo=true NZ_JAFIRP010000040.1 Protein Homology CDS 2510 3543 . - 0 ID=cds-JYJ20_RS12490;Parent=gene-JYJ20_RS12490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017518.7;locus_tag=JYJ20_RS12490;product=zonular occludens toxin family protein;pseudo=true;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 3553 3846 . - . ID=gene-JYJ20_RS11645;Name=JYJ20_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11645 NZ_JAFIRP010000040.1 Protein Homology CDS 3553 3846 . - 0 ID=cds-WP_006253427.1;Parent=gene-JYJ20_RS11645;Dbxref=GenBank:WP_006253427.1;Name=WP_006253427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253427.1;locus_tag=JYJ20_RS11645;product=DUF2523 family protein;protein_id=WP_006253427.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 3855 5210 . - . ID=gene-JYJ20_RS12305;Name=JYJ20_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12305 NZ_JAFIRP010000040.1 Protein Homology CDS 3855 5210 . - 0 ID=cds-WP_245155428.1;Parent=gene-JYJ20_RS12305;Dbxref=GenBank:WP_245155428.1;Name=WP_245155428.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF014369.7;locus_tag=JYJ20_RS12305;product=single-stranded DNA-binding protein;protein_id=WP_245155428.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq pseudogene 5240 6121 . - . ID=gene-JYJ20_RS11660;Name=JYJ20_RS11660;end_range=6121,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS11660;partial=true;pseudo=true NZ_JAFIRP010000040.1 Protein Homology CDS 5240 6121 . - 0 ID=cds-JYJ20_RS11660;Parent=gene-JYJ20_RS11660;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006260;end_range=6121,.;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005821706.1;locus_tag=JYJ20_RS11660;partial=true;product=phage/plasmid replication protein%2C II/X family;pseudo=true;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 6612 6827 . - . ID=gene-JYJ20_RS11665;Name=JYJ20_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11665 NZ_JAFIRP010000040.1 GeneMarkS-2+ CDS 6612 6827 . - 0 ID=cds-WP_209026282.1;Parent=gene-JYJ20_RS11665;Dbxref=GenBank:WP_209026282.1;Name=WP_209026282.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS11665;product=antitoxin;protein_id=WP_209026282.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 7130 8608 . + . ID=gene-JYJ20_RS11670;Name=JYJ20_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11670 NZ_JAFIRP010000040.1 Protein Homology CDS 7130 8608 . + 0 ID=cds-WP_006253323.1;Parent=gene-JYJ20_RS11670;Dbxref=GenBank:WP_006253323.1;Name=WP_006253323.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252334.1;locus_tag=JYJ20_RS11670;product=nicotinate phosphoribosyltransferase;protein_id=WP_006253323.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 8681 10657 . - . ID=gene-JYJ20_RS11675;Name=cpdB;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=JYJ20_RS11675 NZ_JAFIRP010000040.1 Protein Homology CDS 8681 10657 . - 0 ID=cds-WP_006250065.1;Parent=gene-JYJ20_RS11675;Dbxref=GenBank:WP_006250065.1;Name=WP_006250065.1;Ontology_term=GO:0009117,GO:0008663;gbkey=CDS;gene=cpdB;go_function=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005632207.1;locus_tag=JYJ20_RS11675;product=2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase;protein_id=WP_006250065.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 10898 12106 . + . ID=gene-JYJ20_RS11680;Name=JYJ20_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11680 NZ_JAFIRP010000040.1 Protein Homology CDS 10898 12106 . + 0 ID=cds-WP_006250066.1;Parent=gene-JYJ20_RS11680;Dbxref=GenBank:WP_006250066.1;Name=WP_006250066.1;Ontology_term=GO:0006085,GO:0016310,GO:0000287,GO:0005524,GO:0008776;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,acetate kinase activity|0008776||IEA;go_process=acetyl-CoA biosynthetic process|0006085||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848442.1;locus_tag=JYJ20_RS11680;product=acetate kinase;protein_id=WP_006250066.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 12159 14294 . + . ID=gene-JYJ20_RS11685;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=JYJ20_RS11685 NZ_JAFIRP010000040.1 Protein Homology CDS 12159 14294 . + 0 ID=cds-WP_209026283.1;Parent=gene-JYJ20_RS11685;Dbxref=GenBank:WP_209026283.1;Name=WP_209026283.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005542370.1;locus_tag=JYJ20_RS11685;product=phosphate acetyltransferase;protein_id=WP_209026283.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 14408 15088 . + . ID=gene-JYJ20_RS11690;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=JYJ20_RS11690 NZ_JAFIRP010000040.1 Protein Homology CDS 14408 15088 . + 0 ID=cds-WP_006250068.1;Parent=gene-JYJ20_RS11690;Dbxref=GenBank:WP_006250068.1;Name=WP_006250068.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252337.1;locus_tag=JYJ20_RS11690;product=carbonate dehydratase;protein_id=WP_006250068.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 15411 17132 . + . ID=gene-JYJ20_RS11695;Name=JYJ20_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11695 NZ_JAFIRP010000040.1 Protein Homology CDS 15411 17132 . + 0 ID=cds-WP_006250070.1;Parent=gene-JYJ20_RS11695;Dbxref=GenBank:WP_006250070.1;Name=WP_006250070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651963.1;locus_tag=JYJ20_RS11695;product=acetolactate synthase 3 large subunit;protein_id=WP_006250070.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 17125 17616 . + . ID=gene-JYJ20_RS11700;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=JYJ20_RS11700 NZ_JAFIRP010000040.1 Protein Homology CDS 17125 17616 . + 0 ID=cds-WP_006250071.1;Parent=gene-JYJ20_RS11700;Dbxref=GenBank:WP_006250071.1;Name=WP_006250071.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005647229.1;locus_tag=JYJ20_RS11700;product=acetolactate synthase small subunit;protein_id=WP_006250071.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 17695 18582 . - . ID=gene-JYJ20_RS11705;Name=JYJ20_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11705 NZ_JAFIRP010000040.1 Protein Homology CDS 17695 18582 . - 0 ID=cds-WP_020824310.1;Parent=gene-JYJ20_RS11705;Dbxref=GenBank:WP_020824310.1;Name=WP_020824310.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252339.1;locus_tag=JYJ20_RS11705;product=DMT family transporter;protein_id=WP_020824310.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 18636 19952 . - . ID=gene-JYJ20_RS11710;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=JYJ20_RS11710 NZ_JAFIRP010000040.1 Protein Homology CDS 18636 19952 . - 0 ID=cds-WP_209026285.1;Parent=gene-JYJ20_RS11710;Dbxref=GenBank:WP_209026285.1;Name=WP_209026285.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity%2C acting on acetyl-CoA as donor|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253551.1;locus_tag=JYJ20_RS11710;product=amino-acid N-acetyltransferase;protein_id=WP_209026285.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 20081 20266 . - . ID=gene-JYJ20_RS11715;Name=JYJ20_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11715 NZ_JAFIRP010000040.1 Protein Homology CDS 20081 20266 . - 0 ID=cds-WP_006253552.1;Parent=gene-JYJ20_RS11715;Dbxref=GenBank:WP_006253552.1;Name=WP_006253552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253552.1;locus_tag=JYJ20_RS11715;product=YegP family protein;protein_id=WP_006253552.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 20382 21704 . - . ID=gene-JYJ20_RS11720;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=JYJ20_RS11720 NZ_JAFIRP010000040.1 Protein Homology CDS 20382 21704 . - 0 ID=cds-WP_006249010.1;Parent=gene-JYJ20_RS11720;Dbxref=GenBank:WP_006249010.1;Name=WP_006249010.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249010.1;locus_tag=JYJ20_RS11720;product=Xaa-Pro aminopeptidase;protein_id=WP_006249010.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 21920 22243 . + . ID=gene-JYJ20_RS11725;Name=JYJ20_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11725 NZ_JAFIRP010000040.1 Protein Homology CDS 21920 22243 . + 0 ID=cds-WP_006249011.1;Parent=gene-JYJ20_RS11725;Dbxref=GenBank:WP_006249011.1;Name=WP_006249011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249011.1;locus_tag=JYJ20_RS11725;product=hypothetical protein;protein_id=WP_006249011.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 22320 23339 . - . ID=gene-JYJ20_RS11730;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=JYJ20_RS11730 NZ_JAFIRP010000040.1 Protein Homology CDS 22320 23339 . - 0 ID=cds-WP_015484632.1;Parent=gene-JYJ20_RS11730;Dbxref=GenBank:WP_015484632.1;Name=WP_015484632.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484632.1;locus_tag=JYJ20_RS11730;product=class II fructose-bisphosphatase;protein_id=WP_015484632.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 23536 23754 . + . ID=gene-JYJ20_RS11735;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=JYJ20_RS11735 NZ_JAFIRP010000040.1 Protein Homology CDS 23536 23754 . + 0 ID=cds-WP_006249013.1;Parent=gene-JYJ20_RS11735;Dbxref=GenBank:WP_006249013.1;Name=WP_006249013.1;Ontology_term=GO:0043093,GO:0090529,GO:0005737;gbkey=CDS;gene=zapB;go_component=cytoplasm|0005737||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA,cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011201404.1;locus_tag=JYJ20_RS11735;product=cell division protein ZapB;protein_id=WP_006249013.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 23810 24391 . + . ID=gene-JYJ20_RS11740;Name=JYJ20_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11740 NZ_JAFIRP010000040.1 Protein Homology CDS 23810 24391 . + 0 ID=cds-WP_006249014.1;Parent=gene-JYJ20_RS11740;Dbxref=GenBank:WP_006249014.1;Name=WP_006249014.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014064645.1;locus_tag=JYJ20_RS11740;product=thymidine kinase;protein_id=WP_006249014.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 24482 25600 . - . ID=gene-JYJ20_RS11745;Name=JYJ20_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11745 NZ_JAFIRP010000040.1 Protein Homology CDS 24482 25600 . - 0 ID=cds-WP_006249015.1;Parent=gene-JYJ20_RS11745;Dbxref=GenBank:WP_006249015.1;Name=WP_006249015.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249015.1;locus_tag=JYJ20_RS11745;product=anaerobic sulfatase maturase;protein_id=WP_006249015.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 25690 27138 . - . ID=gene-JYJ20_RS11750;Name=JYJ20_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11750 NZ_JAFIRP010000040.1 Protein Homology CDS 25690 27138 . - 0 ID=cds-WP_006249016.1;Parent=gene-JYJ20_RS11750;Dbxref=GenBank:WP_006249016.1;Name=WP_006249016.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005822114.1;locus_tag=JYJ20_RS11750;product=sulfatase family protein;protein_id=WP_006249016.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 27285 28982 . - . ID=gene-JYJ20_RS11755;Name=JYJ20_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11755 NZ_JAFIRP010000040.1 Protein Homology CDS 27285 28982 . - 0 ID=cds-WP_006249017.1;Parent=gene-JYJ20_RS11755;Dbxref=GenBank:WP_006249017.1;Name=WP_006249017.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249017.1;locus_tag=JYJ20_RS11755;product=solute:sodium symporter family transporter;protein_id=WP_006249017.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 29126 29677 . - . ID=gene-JYJ20_RS11760;Name=JYJ20_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11760 NZ_JAFIRP010000040.1 Protein Homology CDS 29126 29677 . - 0 ID=cds-WP_006249018.1;Parent=gene-JYJ20_RS11760;Dbxref=GenBank:WP_006249018.1;Name=WP_006249018.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252345.1;locus_tag=JYJ20_RS11760;product=Crp/Fnr family transcriptional regulator;protein_id=WP_006249018.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 29776 30585 . + . ID=gene-JYJ20_RS11765;Name=JYJ20_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11765 NZ_JAFIRP010000040.1 Protein Homology CDS 29776 30585 . + 0 ID=cds-WP_006249019.1;Parent=gene-JYJ20_RS11765;Dbxref=GenBank:WP_006249019.1;Name=WP_006249019.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249019.1;locus_tag=JYJ20_RS11765;product=sulfite exporter TauE/SafE family protein;protein_id=WP_006249019.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 30602 31294 . - . ID=gene-JYJ20_RS11770;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=JYJ20_RS11770 NZ_JAFIRP010000040.1 Protein Homology CDS 30602 31294 . - 0 ID=cds-WP_006249020.1;Parent=gene-JYJ20_RS11770;Dbxref=GenBank:WP_006249020.1;Name=WP_006249020.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875421.1;locus_tag=JYJ20_RS11770;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_006249020.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 31381 32463 . - . ID=gene-JYJ20_RS11775;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=JYJ20_RS11775 NZ_JAFIRP010000040.1 Protein Homology CDS 31381 32463 . - 0 ID=cds-WP_006249021.1;Parent=gene-JYJ20_RS11775;Dbxref=GenBank:WP_006249021.1;Name=WP_006249021.1;Ontology_term=GO:0009073,GO:0003849;gbkey=CDS;gene=aroG;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249021.1;locus_tag=JYJ20_RS11775;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_006249021.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 32552 33391 . - . ID=gene-JYJ20_RS11780;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=JYJ20_RS11780 NZ_JAFIRP010000040.1 Protein Homology CDS 32552 33391 . - 0 ID=cds-WP_006249022.1;Parent=gene-JYJ20_RS11780;Dbxref=GenBank:WP_006249022.1;Name=WP_006249022.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249022.1;locus_tag=JYJ20_RS11780;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_006249022.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 33543 36203 . - . ID=gene-JYJ20_RS11785;Name=JYJ20_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11785 NZ_JAFIRP010000040.1 Protein Homology CDS 33543 36203 . - 0 ID=cds-WP_006249023.1;Parent=gene-JYJ20_RS11785;Dbxref=GenBank:WP_006249023.1;Name=WP_006249023.1;Ontology_term=GO:0007059,GO:0051301,GO:0003677,GO:0005524,GO:0015616;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,DNA translocase activity|0015616||IEA;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249023.1;locus_tag=JYJ20_RS11785;product=DNA translocase FtsK;protein_id=WP_006249023.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 36214 36696 . - . ID=gene-JYJ20_RS11790;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=JYJ20_RS11790 NZ_JAFIRP010000040.1 Protein Homology CDS 36214 36696 . - 0 ID=cds-WP_006251058.1;Parent=gene-JYJ20_RS11790;Dbxref=GenBank:WP_006251058.1;Name=WP_006251058.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015432509.1;locus_tag=JYJ20_RS11790;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_006251058.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 36753 37871 . - . ID=gene-JYJ20_RS11795;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=JYJ20_RS11795 NZ_JAFIRP010000040.1 Protein Homology CDS 36753 37871 . - 0 ID=cds-WP_209026287.1;Parent=gene-JYJ20_RS11795;Dbxref=GenBank:WP_209026287.1;Name=WP_209026287.1;Ontology_term=GO:0006396,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249025.1;locus_tag=JYJ20_RS11795;product=ribonuclease D;protein_id=WP_209026287.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq gene 38005 39192 . + . ID=gene-JYJ20_RS11800;Name=JYJ20_RS11800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11800 NZ_JAFIRP010000040.1 Protein Homology CDS 38005 39192 . + 0 ID=cds-WP_006249026.1;Parent=gene-JYJ20_RS11800;Dbxref=GenBank:WP_006249026.1;Name=WP_006249026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249026.1;locus_tag=JYJ20_RS11800;product=ROK family protein;protein_id=WP_006249026.1;transl_table=11 NZ_JAFIRP010000040.1 RefSeq pseudogene 39240 39818 . + . ID=gene-JYJ20_RS11805;Name=bioD;end_range=39818,.;gbkey=Gene;gene=bioD;gene_biotype=pseudogene;locus_tag=JYJ20_RS11805;partial=true;pseudo=true NZ_JAFIRP010000040.1 Protein Homology CDS 39240 39818 . + 0 ID=cds-JYJ20_RS11805;Parent=gene-JYJ20_RS11805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;end_range=39818,.;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596872.1;locus_tag=JYJ20_RS11805;partial=true;product=dethiobiotin synthase;pseudo=true;transl_table=11 ##sequence-region NZ_JAFIRP010000041.1 1 10360 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000041.1 RefSeq region 1 10360 . + . ID=NZ_JAFIRP010000041.1:1..10360;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000041.1 RefSeq gene 304 2010 . + . ID=gene-JYJ20_RS11810;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=JYJ20_RS11810 NZ_JAFIRP010000041.1 Protein Homology CDS 304 2010 . + 0 ID=cds-WP_015484535.1;Parent=gene-JYJ20_RS11810;Dbxref=GenBank:WP_015484535.1;Name=WP_015484535.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875393.1;locus_tag=JYJ20_RS11810;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_015484535.1;transl_table=11 NZ_JAFIRP010000041.1 RefSeq gene 2059 2898 . + . ID=gene-JYJ20_RS11815;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=JYJ20_RS11815 NZ_JAFIRP010000041.1 Protein Homology CDS 2059 2898 . + 0 ID=cds-WP_209026289.1;Parent=gene-JYJ20_RS11815;Dbxref=GenBank:WP_209026289.1;Name=WP_209026289.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484534.1;locus_tag=JYJ20_RS11815;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_209026289.1;transl_table=11 NZ_JAFIRP010000041.1 RefSeq pseudogene 2947 3624 . - . ID=gene-JYJ20_RS11820;Name=JYJ20_RS11820;end_range=3624,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS11820;partial=true;pseudo=true NZ_JAFIRP010000041.1 Protein Homology CDS 2947 3624 . - 0 ID=cds-JYJ20_RS11820;Parent=gene-JYJ20_RS11820;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524;end_range=3624,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251475.1;locus_tag=JYJ20_RS11820;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_JAFIRP010000041.1 RefSeq gene 3710 4372 . + . ID=gene-JYJ20_RS11825;Name=JYJ20_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11825 NZ_JAFIRP010000041.1 Protein Homology CDS 3710 4372 . + 0 ID=cds-WP_044426492.1;Parent=gene-JYJ20_RS11825;Dbxref=GenBank:WP_044426492.1;Name=WP_044426492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478341.1;locus_tag=JYJ20_RS11825;product=heteromeric transposase endonuclease subunit TnsA;protein_id=WP_044426492.1;transl_table=11 NZ_JAFIRP010000041.1 RefSeq gene 4362 6290 . + . ID=gene-JYJ20_RS11830;Name=JYJ20_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11830 NZ_JAFIRP010000041.1 Protein Homology CDS 4362 6290 . + 0 ID=cds-WP_015586984.1;Parent=gene-JYJ20_RS11830;Dbxref=GenBank:WP_015586984.1;Name=WP_015586984.1;Ontology_term=GO:0006310,GO:0006313,GO:0015074,GO:0032196,GO:0003677,GO:0004803,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,DNA transposition|0006313||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015586984.1;locus_tag=JYJ20_RS11830;product=Mu transposase C-terminal domain-containing protein;protein_id=WP_015586984.1;transl_table=11 NZ_JAFIRP010000041.1 RefSeq gene 6290 7177 . + . ID=gene-JYJ20_RS11835;Name=JYJ20_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11835 NZ_JAFIRP010000041.1 Protein Homology CDS 6290 7177 . + 0 ID=cds-WP_006253400.1;Parent=gene-JYJ20_RS11835;Dbxref=GenBank:WP_006253400.1;Name=WP_006253400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012478339.1;locus_tag=JYJ20_RS11835;product=TniB family NTP-binding protein;protein_id=WP_006253400.1;transl_table=11 NZ_JAFIRP010000041.1 RefSeq gene 7135 8241 . + . ID=gene-JYJ20_RS11840;Name=JYJ20_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11840 NZ_JAFIRP010000041.1 Protein Homology CDS 7135 8241 . + 0 ID=cds-WP_015484465.1;Parent=gene-JYJ20_RS11840;Dbxref=GenBank:WP_015484465.1;Name=WP_015484465.1;Ontology_term=GO:0015074,GO:0032196;gbkey=CDS;go_process=DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248676.1;locus_tag=JYJ20_RS11840;product=TniQ family protein;protein_id=WP_015484465.1;transl_table=11 NZ_JAFIRP010000041.1 RefSeq gene 8238 9662 . + . ID=gene-JYJ20_RS11845;Name=JYJ20_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11845 NZ_JAFIRP010000041.1 Protein Homology CDS 8238 9662 . + 0 ID=cds-WP_015484466.1;Parent=gene-JYJ20_RS11845;Dbxref=GenBank:WP_015484466.1;Name=WP_015484466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484466.1;locus_tag=JYJ20_RS11845;product=hypothetical protein;protein_id=WP_015484466.1;transl_table=11 NZ_JAFIRP010000041.1 RefSeq gene 9777 9983 . + . ID=gene-JYJ20_RS11850;Name=JYJ20_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11850 NZ_JAFIRP010000041.1 Protein Homology CDS 9777 9983 . + 0 ID=cds-WP_006253397.1;Parent=gene-JYJ20_RS11850;Dbxref=GenBank:WP_006253397.1;Name=WP_006253397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253397.1;locus_tag=JYJ20_RS11850;product=hypothetical protein;protein_id=WP_006253397.1;transl_table=11 NZ_JAFIRP010000041.1 RefSeq gene 10096 10360 . + . ID=gene-JYJ20_RS11855;Name=JYJ20_RS11855;end_range=10360,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11855;partial=true NZ_JAFIRP010000041.1 Protein Homology CDS 10096 10360 . + 0 ID=cds-WP_209026290.1;Parent=gene-JYJ20_RS11855;Dbxref=GenBank:WP_209026290.1;Name=WP_209026290.1;end_range=10360,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011150324.1;locus_tag=JYJ20_RS11855;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_209026290.1;transl_table=11 ##sequence-region NZ_JAFIRP010000042.1 1 10662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000042.1 RefSeq region 1 10662 . + . ID=NZ_JAFIRP010000042.1:1..10662;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000042.1 RefSeq gene 1 475 . - . ID=gene-JYJ20_RS11860;Name=JYJ20_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11860;partial=true;start_range=.,1 NZ_JAFIRP010000042.1 Protein Homology CDS 1 475 . - 0 ID=cds-WP_209026291.1;Parent=gene-JYJ20_RS11860;Dbxref=GenBank:WP_209026291.1;Name=WP_209026291.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011199348.1;locus_tag=JYJ20_RS11860;partial=true;product=GTP-binding protein;protein_id=WP_209026291.1;start_range=.,1;transl_table=11 NZ_JAFIRP010000042.1 RefSeq gene 591 666 . - . ID=gene-JYJ20_RS11865;Name=JYJ20_RS11865;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS11865 NZ_JAFIRP010000042.1 tRNAscan-SE tRNA 591 666 . - . ID=rna-JYJ20_RS11865;Parent=gene-JYJ20_RS11865;anticodon=(pos:complement(631..633));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS11865;product=tRNA-Thr NZ_JAFIRP010000042.1 tRNAscan-SE exon 591 666 . - . ID=exon-JYJ20_RS11865-1;Parent=rna-JYJ20_RS11865;anticodon=(pos:complement(631..633));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS11865;product=tRNA-Thr NZ_JAFIRP010000042.1 RefSeq gene 670 744 . - . ID=gene-JYJ20_RS11870;Name=JYJ20_RS11870;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS11870 NZ_JAFIRP010000042.1 tRNAscan-SE tRNA 670 744 . - . ID=rna-JYJ20_RS11870;Parent=gene-JYJ20_RS11870;anticodon=(pos:complement(709..711));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS11870;product=tRNA-Gly NZ_JAFIRP010000042.1 tRNAscan-SE exon 670 744 . - . ID=exon-JYJ20_RS11870-1;Parent=rna-JYJ20_RS11870;anticodon=(pos:complement(709..711));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS11870;product=tRNA-Gly NZ_JAFIRP010000042.1 RefSeq gene 788 872 . - . ID=gene-JYJ20_RS11875;Name=JYJ20_RS11875;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS11875 NZ_JAFIRP010000042.1 tRNAscan-SE tRNA 788 872 . - . ID=rna-JYJ20_RS11875;Parent=gene-JYJ20_RS11875;anticodon=(pos:complement(836..838));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS11875;product=tRNA-Tyr NZ_JAFIRP010000042.1 tRNAscan-SE exon 788 872 . - . ID=exon-JYJ20_RS11875-1;Parent=rna-JYJ20_RS11875;anticodon=(pos:complement(836..838));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS11875;product=tRNA-Tyr NZ_JAFIRP010000042.1 RefSeq gene 907 982 . - . ID=gene-JYJ20_RS11880;Name=JYJ20_RS11880;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS11880 NZ_JAFIRP010000042.1 tRNAscan-SE tRNA 907 982 . - . ID=rna-JYJ20_RS11880;Parent=gene-JYJ20_RS11880;anticodon=(pos:complement(947..949));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS11880;product=tRNA-Thr NZ_JAFIRP010000042.1 tRNAscan-SE exon 907 982 . - . ID=exon-JYJ20_RS11880-1;Parent=rna-JYJ20_RS11880;anticodon=(pos:complement(947..949));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS11880;product=tRNA-Thr NZ_JAFIRP010000042.1 RefSeq gene 1229 2179 . + . ID=gene-JYJ20_RS11885;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=JYJ20_RS11885 NZ_JAFIRP010000042.1 Protein Homology CDS 1229 2179 . + 0 ID=cds-WP_006249997.1;Parent=gene-JYJ20_RS11885;Dbxref=GenBank:WP_006249997.1;Name=WP_006249997.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608808.1;locus_tag=JYJ20_RS11885;product=type I pantothenate kinase;protein_id=WP_006249997.1;transl_table=11 NZ_JAFIRP010000042.1 RefSeq gene 2332 2871 . + . ID=gene-JYJ20_RS11890;Name=JYJ20_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11890 NZ_JAFIRP010000042.1 Protein Homology CDS 2332 2871 . + 0 ID=cds-WP_006249996.1;Parent=gene-JYJ20_RS11890;Dbxref=GenBank:WP_006249996.1;Name=WP_006249996.1;Ontology_term=GO:0017004,GO:0015036,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249996.1;locus_tag=JYJ20_RS11890;product=DsbE family thiol:disulfide interchange protein;protein_id=WP_006249996.1;transl_table=11 NZ_JAFIRP010000042.1 RefSeq gene 2872 3909 . + . ID=gene-JYJ20_RS11895;Name=JYJ20_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11895 NZ_JAFIRP010000042.1 Protein Homology CDS 2872 3909 . + 0 ID=cds-WP_006249995.1;Parent=gene-JYJ20_RS11895;Dbxref=GenBank:WP_006249995.1;Name=WP_006249995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249995.1;locus_tag=JYJ20_RS11895;product=hypothetical protein;protein_id=WP_006249995.1;transl_table=11 NZ_JAFIRP010000042.1 RefSeq gene 3860 4345 . + . ID=gene-JYJ20_RS11900;Name=JYJ20_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11900 NZ_JAFIRP010000042.1 Protein Homology CDS 3860 4345 . + 0 ID=cds-WP_006249994.1;Parent=gene-JYJ20_RS11900;Dbxref=GenBank:WP_006249994.1;Name=WP_006249994.1;Ontology_term=GO:0017004,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249994.1;locus_tag=JYJ20_RS11900;product=cytochrome c-type biogenesis protein;protein_id=WP_006249994.1;transl_table=11 NZ_JAFIRP010000042.1 RefSeq gene 4342 5256 . + . ID=gene-JYJ20_RS11905;Name=ccmI;gbkey=Gene;gene=ccmI;gene_biotype=protein_coding;locus_tag=JYJ20_RS11905 NZ_JAFIRP010000042.1 Protein Homology CDS 4342 5256 . + 0 ID=cds-WP_209026292.1;Parent=gene-JYJ20_RS11905;Dbxref=GenBank:WP_209026292.1;Name=WP_209026292.1;Ontology_term=GO:0017004,GO:0051082;gbkey=CDS;gene=ccmI;go_function=unfolded protein binding|0051082||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250786.1;locus_tag=JYJ20_RS11905;product=c-type cytochrome biogenesis protein CcmI;protein_id=WP_209026292.1;transl_table=11 NZ_JAFIRP010000042.1 RefSeq gene 5253 5858 . + . ID=gene-JYJ20_RS11910;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=JYJ20_RS11910 NZ_JAFIRP010000042.1 Protein Homology CDS 5253 5858 . + 0 ID=cds-WP_006249992.1;Parent=gene-JYJ20_RS11910;Dbxref=GenBank:WP_006249992.1;Name=WP_006249992.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249992.1;locus_tag=JYJ20_RS11910;product=molybdopterin adenylyltransferase;protein_id=WP_006249992.1;transl_table=11 NZ_JAFIRP010000042.1 RefSeq gene 5868 6206 . + . ID=gene-JYJ20_RS11915;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=JYJ20_RS11915 NZ_JAFIRP010000042.1 Protein Homology CDS 5868 6206 . + 0 ID=cds-WP_006249991.1;Parent=gene-JYJ20_RS11915;Dbxref=GenBank:WP_006249991.1;Name=WP_006249991.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005654045.1;locus_tag=JYJ20_RS11915;product=nitrogen regulatory protein P-II;protein_id=WP_006249991.1;transl_table=11 NZ_JAFIRP010000042.1 RefSeq gene 6287 6766 . + . ID=gene-JYJ20_RS11920;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=JYJ20_RS11920 NZ_JAFIRP010000042.1 Protein Homology CDS 6287 6766 . + 0 ID=cds-WP_006249989.1;Parent=gene-JYJ20_RS11920;Dbxref=GenBank:WP_006249989.1;Name=WP_006249989.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249989.1;locus_tag=JYJ20_RS11920;product=signal peptidase II;protein_id=WP_006249989.1;transl_table=11 NZ_JAFIRP010000042.1 RefSeq gene 6777 7721 . + . ID=gene-JYJ20_RS11925;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=JYJ20_RS11925 NZ_JAFIRP010000042.1 Protein Homology CDS 6777 7721 . + 0 ID=cds-WP_006249988.1;Parent=gene-JYJ20_RS11925;Dbxref=GenBank:WP_006249988.1;Name=WP_006249988.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012263266.1;locus_tag=JYJ20_RS11925;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_006249988.1;transl_table=11 NZ_JAFIRP010000042.1 RefSeq gene 7721 7969 . + . ID=gene-JYJ20_RS11930;Name=JYJ20_RS11930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11930 NZ_JAFIRP010000042.1 Protein Homology CDS 7721 7969 . + 0 ID=cds-WP_006249987.1;Parent=gene-JYJ20_RS11930;Dbxref=GenBank:WP_006249987.1;Name=WP_006249987.1;Ontology_term=GO:0006099,GO:0006105,GO:0022900,GO:0034552;gbkey=CDS;go_process=tricarboxylic acid cycle|0006099||IEA,succinate metabolic process|0006105||IEA,electron transport chain|0022900||IEA,respiratory chain complex II assembly|0034552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249987.1;locus_tag=JYJ20_RS11930;product=FAD assembly factor SdhE;protein_id=WP_006249987.1;transl_table=11 NZ_JAFIRP010000042.1 RefSeq gene 8176 8544 . - . ID=gene-JYJ20_RS12310;Name=JYJ20_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12310 NZ_JAFIRP010000042.1 Protein Homology CDS 8176 8544 . - 0 ID=cds-WP_235319316.1;Parent=gene-JYJ20_RS12310;Dbxref=GenBank:WP_235319316.1;Name=WP_235319316.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: protein motif:HMM:NF024967.7;locus_tag=JYJ20_RS12310;product=class I SAM-dependent methyltransferase;protein_id=WP_235319316.1;transl_table=11 NZ_JAFIRP010000042.1 RefSeq gene 8684 8857 . + . ID=gene-JYJ20_RS12315;Name=JYJ20_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12315 NZ_JAFIRP010000042.1 GeneMarkS-2+ CDS 8684 8857 . + 0 ID=cds-WP_237027474.1;Parent=gene-JYJ20_RS12315;Dbxref=GenBank:WP_237027474.1;Name=WP_237027474.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS12315;product=hypothetical protein;protein_id=WP_237027474.1;transl_table=11 NZ_JAFIRP010000042.1 RefSeq gene 9062 9394 . + . ID=gene-JYJ20_RS11940;Name=JYJ20_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11940 NZ_JAFIRP010000042.1 Protein Homology CDS 9062 9394 . + 0 ID=cds-WP_006249984.1;Parent=gene-JYJ20_RS11940;Dbxref=GenBank:WP_006249984.1;Name=WP_006249984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650843.1;locus_tag=JYJ20_RS11940;product=MaoP family protein;protein_id=WP_006249984.1;transl_table=11 NZ_JAFIRP010000042.1 RefSeq gene 9459 10550 . + . ID=gene-JYJ20_RS11945;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=JYJ20_RS11945 NZ_JAFIRP010000042.1 Protein Homology CDS 9459 10550 . + 0 ID=cds-WP_209026293.1;Parent=gene-JYJ20_RS11945;Dbxref=GenBank:WP_209026293.1;Name=WP_209026293.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848685.1;locus_tag=JYJ20_RS11945;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_209026293.1;transl_table=11 ##sequence-region NZ_JAFIRP010000043.1 1 2427 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000043.1 RefSeq region 1 2427 . + . ID=NZ_JAFIRP010000043.1:1..2427;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000043.1 RefSeq gene 444 1685 . - . ID=gene-JYJ20_RS11950;Name=JYJ20_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11950 NZ_JAFIRP010000043.1 Protein Homology CDS 444 1685 . - 0 ID=cds-WP_006250514.1;Parent=gene-JYJ20_RS11950;Dbxref=GenBank:WP_006250514.1;Name=WP_006250514.1;Ontology_term=GO:0016310,GO:0004674,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248316.1;locus_tag=JYJ20_RS11950;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_006250514.1;transl_table=11 NZ_JAFIRP010000043.1 RefSeq gene 1685 2149 . - . ID=gene-JYJ20_RS12495;Name=JYJ20_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12495 NZ_JAFIRP010000043.1 GeneMarkS-2+ CDS 1685 2149 . - 0 ID=cds-WP_425331228.1;Parent=gene-JYJ20_RS12495;Dbxref=GenBank:WP_425331228.1;Name=WP_425331228.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS12495;product=helix-turn-helix domain-containing protein;protein_id=WP_425331228.1;transl_table=11 ##sequence-region NZ_JAFIRP010000044.1 1 5809 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000044.1 RefSeq region 1 5809 . + . ID=NZ_JAFIRP010000044.1:1..5809;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000044.1 RefSeq gene 186 977 . - . ID=gene-JYJ20_RS11960;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=JYJ20_RS11960 NZ_JAFIRP010000044.1 Protein Homology CDS 186 977 . - 0 ID=cds-WP_006248259.1;Parent=gene-JYJ20_RS11960;Dbxref=GenBank:WP_006248259.1;Name=WP_006248259.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248259.1;locus_tag=JYJ20_RS11960;product=glutamate racemase;protein_id=WP_006248259.1;transl_table=11 NZ_JAFIRP010000044.1 RefSeq gene 1107 1976 . + . ID=gene-JYJ20_RS11965;Name=JYJ20_RS11965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11965 NZ_JAFIRP010000044.1 Protein Homology CDS 1107 1976 . + 0 ID=cds-WP_006248261.1;Parent=gene-JYJ20_RS11965;Dbxref=GenBank:WP_006248261.1;Name=WP_006248261.1;Ontology_term=GO:0016491,GO:0050661,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248261.1;locus_tag=JYJ20_RS11965;product=NAD(P)-dependent oxidoreductase;protein_id=WP_006248261.1;transl_table=11 NZ_JAFIRP010000044.1 RefSeq gene 2014 2499 . - . ID=gene-JYJ20_RS11970;Name=JYJ20_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11970 NZ_JAFIRP010000044.1 Protein Homology CDS 2014 2499 . - 0 ID=cds-WP_006248262.1;Parent=gene-JYJ20_RS11970;Dbxref=GenBank:WP_006248262.1;Name=WP_006248262.1;Ontology_term=GO:0006744,GO:0008813,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=chorismate lyase activity|0008813||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248262.1;locus_tag=JYJ20_RS11970;product=chorismate--pyruvate lyase family protein;protein_id=WP_006248262.1;transl_table=11 NZ_JAFIRP010000044.1 RefSeq gene 2510 3106 . - . ID=gene-JYJ20_RS11975;Name=JYJ20_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11975 NZ_JAFIRP010000044.1 Protein Homology CDS 2510 3106 . - 0 ID=cds-WP_006248263.1;Parent=gene-JYJ20_RS11975;Dbxref=GenBank:WP_006248263.1;Name=WP_006248263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248263.1;locus_tag=JYJ20_RS11975;product=hypothetical protein;protein_id=WP_006248263.1;transl_table=11 NZ_JAFIRP010000044.1 RefSeq gene 3181 3942 . - . ID=gene-JYJ20_RS11980;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=JYJ20_RS11980 NZ_JAFIRP010000044.1 Protein Homology CDS 3181 3942 . - 0 ID=cds-WP_006248264.1;Parent=gene-JYJ20_RS11980;Dbxref=GenBank:WP_006248264.1;Name=WP_006248264.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248264.1;locus_tag=JYJ20_RS11980;product=uridine phosphorylase;protein_id=WP_006248264.1;transl_table=11 NZ_JAFIRP010000044.1 RefSeq gene 4123 4821 . - . ID=gene-JYJ20_RS11985;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=JYJ20_RS11985 NZ_JAFIRP010000044.1 Protein Homology CDS 4123 4821 . - 0 ID=cds-WP_006248266.1;Parent=gene-JYJ20_RS11985;Dbxref=GenBank:WP_006248266.1;Name=WP_006248266.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248266.1;locus_tag=JYJ20_RS11985;product=acid phosphatase AphA;protein_id=WP_006248266.1;transl_table=11 NZ_JAFIRP010000044.1 RefSeq gene 4953 5809 . - . ID=gene-JYJ20_RS11990;Name=JYJ20_RS11990;end_range=5809,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11990;partial=true NZ_JAFIRP010000044.1 Protein Homology CDS 4953 5809 . - 2 ID=cds-WP_245155430.1;Parent=gene-JYJ20_RS11990;Dbxref=GenBank:WP_245155430.1;Name=WP_245155430.1;end_range=5809,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248267.1;locus_tag=JYJ20_RS11990;partial=true;product=glycosyltransferase;protein_id=WP_245155430.1;transl_table=11 ##sequence-region NZ_JAFIRP010000045.1 1 5017 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000045.1 RefSeq region 1 5017 . + . ID=NZ_JAFIRP010000045.1:1..5017;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000045.1 RefSeq gene 1 670 . - . ID=gene-JYJ20_RS11995;Name=JYJ20_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS11995;partial=true;start_range=.,1 NZ_JAFIRP010000045.1 Protein Homology CDS 1 670 . - 0 ID=cds-WP_209026295.1;Parent=gene-JYJ20_RS11995;Dbxref=GenBank:WP_209026295.1;Name=WP_209026295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248924.1;locus_tag=JYJ20_RS11995;partial=true;product=TraI domain-containing protein;protein_id=WP_209026295.1;start_range=.,1;transl_table=11 NZ_JAFIRP010000045.1 RefSeq gene 1182 1682 . + . ID=gene-JYJ20_RS12000;Name=JYJ20_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12000 NZ_JAFIRP010000045.1 Protein Homology CDS 1182 1682 . + 0 ID=cds-WP_006248367.1;Parent=gene-JYJ20_RS12000;Dbxref=GenBank:WP_006248367.1;Name=WP_006248367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248367.1;locus_tag=JYJ20_RS12000;product=hypothetical protein;protein_id=WP_006248367.1;transl_table=11 NZ_JAFIRP010000045.1 RefSeq gene 1694 1951 . + . ID=gene-JYJ20_RS12005;Name=JYJ20_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12005 NZ_JAFIRP010000045.1 Protein Homology CDS 1694 1951 . + 0 ID=cds-WP_044428079.1;Parent=gene-JYJ20_RS12005;Dbxref=GenBank:WP_044428079.1;Name=WP_044428079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248366.1;locus_tag=JYJ20_RS12005;product=hypothetical protein;protein_id=WP_044428079.1;transl_table=11 NZ_JAFIRP010000045.1 RefSeq gene 2438 3421 . - . ID=gene-JYJ20_RS12010;Name=JYJ20_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12010 NZ_JAFIRP010000045.1 Protein Homology CDS 2438 3421 . - 0 ID=cds-WP_209026297.1;Parent=gene-JYJ20_RS12010;Dbxref=GenBank:WP_209026297.1;Name=WP_209026297.1;Ontology_term=GO:0003697,GO:0008237,GO:0008270;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248921.1;locus_tag=JYJ20_RS12010;product=ArdC family protein;protein_id=WP_209026297.1;transl_table=11 NZ_JAFIRP010000045.1 RefSeq gene 3502 3657 . - . ID=gene-JYJ20_RS12015;Name=JYJ20_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12015 NZ_JAFIRP010000045.1 Protein Homology CDS 3502 3657 . - 0 ID=cds-WP_209026299.1;Parent=gene-JYJ20_RS12015;Dbxref=GenBank:WP_209026299.1;Name=WP_209026299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248920.1;locus_tag=JYJ20_RS12015;product=hypothetical protein;protein_id=WP_209026299.1;transl_table=11 NZ_JAFIRP010000045.1 RefSeq gene 3671 4084 . - . ID=gene-JYJ20_RS12020;Name=JYJ20_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12020 NZ_JAFIRP010000045.1 Protein Homology CDS 3671 4084 . - 0 ID=cds-WP_209026301.1;Parent=gene-JYJ20_RS12020;Dbxref=GenBank:WP_209026301.1;Name=WP_209026301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484619.1;locus_tag=JYJ20_RS12020;product=hemophilus-specific protein;protein_id=WP_209026301.1;transl_table=11 NZ_JAFIRP010000045.1 RefSeq gene 4198 5017 . - . ID=gene-JYJ20_RS12025;Name=JYJ20_RS12025;end_range=5017,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12025;partial=true NZ_JAFIRP010000045.1 Protein Homology CDS 4198 5017 . - 1 ID=cds-WP_245155431.1;Parent=gene-JYJ20_RS12025;Dbxref=GenBank:WP_245155431.1;Name=WP_245155431.1;end_range=5017,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248918.1;locus_tag=JYJ20_RS12025;partial=true;product=hypothetical protein;protein_id=WP_245155431.1;transl_table=11 ##sequence-region NZ_JAFIRP010000046.1 1 2057 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000046.1 RefSeq region 1 2057 . + . ID=NZ_JAFIRP010000046.1:1..2057;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000046.1 RefSeq gene 1 547 . + . ID=gene-JYJ20_RS12030;Name=JYJ20_RS12030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12030;partial=true;start_range=.,1 NZ_JAFIRP010000046.1 Protein Homology CDS 1 547 . + 1 ID=cds-WP_209026303.1;Parent=gene-JYJ20_RS12030;Dbxref=GenBank:WP_209026303.1;Name=WP_209026303.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484059.1;locus_tag=JYJ20_RS12030;partial=true;product=restriction endonuclease subunit S;protein_id=WP_209026303.1;start_range=.,1;transl_table=11 NZ_JAFIRP010000046.1 RefSeq gene 650 1453 . + . ID=gene-JYJ20_RS12035;Name=JYJ20_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12035 NZ_JAFIRP010000046.1 Protein Homology CDS 650 1453 . + 0 ID=cds-WP_209026304.1;Parent=gene-JYJ20_RS12035;Dbxref=GenBank:WP_209026304.1;Name=WP_209026304.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617888.1;locus_tag=JYJ20_RS12035;product=tyrosine-type recombinase/integrase;protein_id=WP_209026304.1;transl_table=11 NZ_JAFIRP010000046.1 RefSeq gene 1508 2057 . - . ID=gene-JYJ20_RS12040;Name=JYJ20_RS12040;end_range=2057,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12040;partial=true NZ_JAFIRP010000046.1 Protein Homology CDS 1508 2057 . - 1 ID=cds-WP_209026305.1;Parent=gene-JYJ20_RS12040;Dbxref=GenBank:WP_209026305.1;Name=WP_209026305.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;end_range=2057,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: protein motif:HMM:NF013579.7;locus_tag=JYJ20_RS12040;partial=true;product=restriction endonuclease subunit S;protein_id=WP_209026305.1;transl_table=11 ##sequence-region NZ_JAFIRP010000005.1 1 216368 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000005.1 RefSeq region 1 216368 . + . ID=NZ_JAFIRP010000005.1:1..216368;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000005.1 RefSeq gene 218 826 . - . ID=gene-JYJ20_RS02310;Name=JYJ20_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02310 NZ_JAFIRP010000005.1 Protein Homology CDS 218 826 . - 0 ID=cds-WP_006249296.1;Parent=gene-JYJ20_RS02310;Dbxref=GenBank:WP_006249296.1;Name=WP_006249296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249296.1;locus_tag=JYJ20_RS02310;product=DUF2057 family protein;protein_id=WP_006249296.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 964 1863 . + . ID=gene-JYJ20_RS02315;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=JYJ20_RS02315 NZ_JAFIRP010000005.1 Protein Homology CDS 964 1863 . + 0 ID=cds-WP_006249295.1;Parent=gene-JYJ20_RS02315;Dbxref=GenBank:WP_006249295.1;Name=WP_006249295.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249295.1;locus_tag=JYJ20_RS02315;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_006249295.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 1922 3430 . + . ID=gene-JYJ20_RS02320;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=JYJ20_RS02320 NZ_JAFIRP010000005.1 Protein Homology CDS 1922 3430 . + 0 ID=cds-WP_209025958.1;Parent=gene-JYJ20_RS02320;Dbxref=GenBank:WP_209025958.1;Name=WP_209025958.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249294.1;locus_tag=JYJ20_RS02320;product=apolipoprotein N-acyltransferase;protein_id=WP_209025958.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 3476 3940 . - . ID=gene-JYJ20_RS02325;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=JYJ20_RS02325 NZ_JAFIRP010000005.1 Protein Homology CDS 3476 3940 . - 0 ID=cds-WP_021279413.1;Parent=gene-JYJ20_RS02325;Dbxref=GenBank:WP_021279413.1;Name=WP_021279413.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249293.1;locus_tag=JYJ20_RS02325;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_021279413.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 4146 5345 . - . ID=gene-JYJ20_RS02330;Name=JYJ20_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02330 NZ_JAFIRP010000005.1 Protein Homology CDS 4146 5345 . - 0 ID=cds-WP_021279412.1;Parent=gene-JYJ20_RS02330;Dbxref=GenBank:WP_021279412.1;Name=WP_021279412.1;Ontology_term=GO:0003935,GO:0008686;gbkey=CDS;go_function=GTP cyclohydrolase II activity|0003935||IEA,3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249292.1;locus_tag=JYJ20_RS02330;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_021279412.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 5364 6011 . - . ID=gene-JYJ20_RS02335;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=JYJ20_RS02335 NZ_JAFIRP010000005.1 Protein Homology CDS 5364 6011 . - 0 ID=cds-WP_006249291.1;Parent=gene-JYJ20_RS02335;Dbxref=GenBank:WP_006249291.1;Name=WP_006249291.1;Ontology_term=GO:0004746;gbkey=CDS;gene=ribE;go_function=riboflavin synthase activity|0004746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991741.1;locus_tag=JYJ20_RS02335;product=riboflavin synthase;protein_id=WP_006249291.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 6228 7325 . - . ID=gene-JYJ20_RS02340;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=JYJ20_RS02340 NZ_JAFIRP010000005.1 Protein Homology CDS 6228 7325 . - 0 ID=cds-WP_209025959.1;Parent=gene-JYJ20_RS02340;Dbxref=GenBank:WP_209025959.1;Name=WP_209025959.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015587018.1;locus_tag=JYJ20_RS02340;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_209025959.1;transl_table=11 NZ_JAFIRP010000005.1 cmsearch riboswitch 7501 7619 . - . ID=id-NZ_JAFIRP010000005.1:7501..7619;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAFIRP010000005.1 RefSeq gene 7823 10225 . + . ID=gene-JYJ20_RS02345;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=JYJ20_RS02345 NZ_JAFIRP010000005.1 Protein Homology CDS 7823 10225 . + 0 ID=cds-WP_209025960.1;Parent=gene-JYJ20_RS02345;Dbxref=GenBank:WP_209025960.1;Name=WP_209025960.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005623665.1;locus_tag=JYJ20_RS02345;product=endopeptidase La;protein_id=WP_209025960.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 10359 11249 . - . ID=gene-JYJ20_RS02350;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=JYJ20_RS02350 NZ_JAFIRP010000005.1 Protein Homology CDS 10359 11249 . - 0 ID=cds-WP_006249287.1;Parent=gene-JYJ20_RS02350;Dbxref=GenBank:WP_006249287.1;Name=WP_006249287.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249287.1;locus_tag=JYJ20_RS02350;product=HTH-type transcriptional activator IlvY;protein_id=WP_006249287.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 11251 12282 . - . ID=gene-JYJ20_RS02355;Name=JYJ20_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02355 NZ_JAFIRP010000005.1 Protein Homology CDS 11251 12282 . - 0 ID=cds-WP_006250584.1;Parent=gene-JYJ20_RS02355;Dbxref=GenBank:WP_006250584.1;Name=WP_006250584.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250584.1;locus_tag=JYJ20_RS02355;product=glycosyltransferase family 9 protein;protein_id=WP_006250584.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 12330 13385 . + . ID=gene-JYJ20_RS02360;Name=JYJ20_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02360 NZ_JAFIRP010000005.1 Protein Homology CDS 12330 13385 . + 0 ID=cds-WP_006249285.1;Parent=gene-JYJ20_RS02360;Dbxref=GenBank:WP_006249285.1;Name=WP_006249285.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249285.1;locus_tag=JYJ20_RS02360;product=glycosyltransferase family 9 protein;protein_id=WP_006249285.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 13440 13652 . - . ID=gene-JYJ20_RS02365;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=JYJ20_RS02365 NZ_JAFIRP010000005.1 Protein Homology CDS 13440 13652 . - 0 ID=cds-WP_006249284.1;Parent=gene-JYJ20_RS02365;Dbxref=GenBank:WP_006249284.1;Name=WP_006249284.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005625828.1;locus_tag=JYJ20_RS02365;product=50S ribosomal protein L31;protein_id=WP_006249284.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 14015 16021 . + . ID=gene-JYJ20_RS02370;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=JYJ20_RS02370 NZ_JAFIRP010000005.1 Protein Homology CDS 14015 16021 . + 0 ID=cds-WP_006249282.1;Parent=gene-JYJ20_RS02370;Dbxref=GenBank:WP_006249282.1;Name=WP_006249282.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991152.1;locus_tag=JYJ20_RS02370;product=transketolase;protein_id=WP_006249282.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 16147 17217 . - . ID=gene-JYJ20_RS02375;Name=JYJ20_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02375 NZ_JAFIRP010000005.1 Protein Homology CDS 16147 17217 . - 0 ID=cds-WP_154704770.1;Parent=gene-JYJ20_RS02375;Dbxref=GenBank:WP_154704770.1;Name=WP_154704770.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652780.1;locus_tag=JYJ20_RS02375;product=PhoH family protein;protein_id=WP_154704770.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 17232 17957 . - . ID=gene-JYJ20_RS02380;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=JYJ20_RS02380 NZ_JAFIRP010000005.1 Protein Homology CDS 17232 17957 . - 0 ID=cds-WP_040080689.1;Parent=gene-JYJ20_RS02380;Dbxref=GenBank:WP_040080689.1;Name=WP_040080689.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249279.1;locus_tag=JYJ20_RS02380;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_040080689.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 18114 19655 . + . ID=gene-JYJ20_RS02385;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=JYJ20_RS02385 NZ_JAFIRP010000005.1 Protein Homology CDS 18114 19655 . + 0 ID=cds-WP_209025961.1;Parent=gene-JYJ20_RS02385;Dbxref=GenBank:WP_209025961.1;Name=WP_209025961.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614583.1;locus_tag=JYJ20_RS02385;product=sodium/proton antiporter NhaB;protein_id=WP_209025961.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 19718 20257 . + . ID=gene-JYJ20_RS02390;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=JYJ20_RS02390 NZ_JAFIRP010000005.1 Protein Homology CDS 19718 20257 . + 0 ID=cds-WP_020831255.1;Parent=gene-JYJ20_RS02390;Dbxref=GenBank:WP_020831255.1;Name=WP_020831255.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614582.1;locus_tag=JYJ20_RS02390;product=disulfide bond formation protein DsbB;protein_id=WP_020831255.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 20316 21506 . + . ID=gene-JYJ20_RS02395;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=JYJ20_RS02395 NZ_JAFIRP010000005.1 Protein Homology CDS 20316 21506 . + 0 ID=cds-WP_209025962.1;Parent=gene-JYJ20_RS02395;Dbxref=GenBank:WP_209025962.1;Name=WP_209025962.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596249.1;locus_tag=JYJ20_RS02395;product=cystathionine beta-lyase;protein_id=WP_209025962.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq pseudogene 21567 22655 . - . ID=gene-JYJ20_RS02400;Name=JYJ20_RS02400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS02400;pseudo=true NZ_JAFIRP010000005.1 Protein Homology CDS 21567 22655 . - 0 ID=cds-JYJ20_RS02400;Parent=gene-JYJ20_RS02400;Note=internal stop;Ontology_term=GO:0071265,GO:0003871,GO:0008270;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607068.1;locus_tag=JYJ20_RS02400;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;pseudo=true;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 22829 23470 . - . ID=gene-JYJ20_RS02405;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=JYJ20_RS02405 NZ_JAFIRP010000005.1 Protein Homology CDS 22829 23470 . - 0 ID=cds-WP_006249274.1;Parent=gene-JYJ20_RS02405;Dbxref=GenBank:WP_006249274.1;Name=WP_006249274.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596245.1;locus_tag=JYJ20_RS02405;product=orotate phosphoribosyltransferase;protein_id=WP_006249274.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 23593 24435 . - . ID=gene-JYJ20_RS02410;Name=JYJ20_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02410 NZ_JAFIRP010000005.1 Protein Homology CDS 23593 24435 . - 0 ID=cds-WP_006249273.1;Parent=gene-JYJ20_RS02410;Dbxref=GenBank:WP_006249273.1;Name=WP_006249273.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006995138.1;locus_tag=JYJ20_RS02410;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_006249273.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 24495 25070 . + . ID=gene-JYJ20_RS02415;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=JYJ20_RS02415 NZ_JAFIRP010000005.1 Protein Homology CDS 24495 25070 . + 0 ID=cds-WP_209025963.1;Parent=gene-JYJ20_RS02415;Dbxref=GenBank:WP_209025963.1;Name=WP_209025963.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249272.1;locus_tag=JYJ20_RS02415;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_209025963.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 25048 25716 . - . ID=gene-JYJ20_RS02420;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=JYJ20_RS02420 NZ_JAFIRP010000005.1 Protein Homology CDS 25048 25716 . - 0 ID=cds-WP_006249271.1;Parent=gene-JYJ20_RS02420;Dbxref=GenBank:WP_006249271.1;Name=WP_006249271.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945546.1;locus_tag=JYJ20_RS02420;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_006249271.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 25728 25970 . - . ID=gene-JYJ20_RS02425;Name=brnA;gbkey=Gene;gene=brnA;gene_biotype=protein_coding;locus_tag=JYJ20_RS02425 NZ_JAFIRP010000005.1 Protein Homology CDS 25728 25970 . - 0 ID=cds-WP_006249270.1;Parent=gene-JYJ20_RS02425;Dbxref=GenBank:WP_006249270.1;Name=WP_006249270.1;Ontology_term=GO:0110001;gbkey=CDS;gene=brnA;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250574.1;locus_tag=JYJ20_RS02425;product=type II toxin-antitoxin system BrnA family antitoxin;protein_id=WP_006249270.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 25954 26250 . - . ID=gene-JYJ20_RS02430;Name=JYJ20_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02430 NZ_JAFIRP010000005.1 Protein Homology CDS 25954 26250 . - 0 ID=cds-WP_006249269.1;Parent=gene-JYJ20_RS02430;Dbxref=GenBank:WP_006249269.1;Name=WP_006249269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249269.1;locus_tag=JYJ20_RS02430;product=BrnT family toxin;protein_id=WP_006249269.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 26377 29289 . - . ID=gene-JYJ20_RS02435;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=JYJ20_RS02435 NZ_JAFIRP010000005.1 Protein Homology CDS 26377 29289 . - 0 ID=cds-WP_209025964.1;Parent=gene-JYJ20_RS02435;Dbxref=GenBank:WP_209025964.1;Name=WP_209025964.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249267.1;locus_tag=JYJ20_RS02435;product=RNA polymerase-associated protein RapA;protein_id=WP_209025964.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 29450 29749 . - . ID=gene-JYJ20_RS02440;Name=JYJ20_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02440 NZ_JAFIRP010000005.1 Protein Homology CDS 29450 29749 . - 0 ID=cds-WP_006249265.1;Parent=gene-JYJ20_RS02440;Dbxref=GenBank:WP_006249265.1;Name=WP_006249265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249265.1;locus_tag=JYJ20_RS02440;product=hypothetical protein;protein_id=WP_006249265.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 29870 31195 . - . ID=gene-JYJ20_RS02445;Name=JYJ20_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02445 NZ_JAFIRP010000005.1 Protein Homology CDS 29870 31195 . - 0 ID=cds-WP_020831251.1;Parent=gene-JYJ20_RS02445;Dbxref=GenBank:WP_020831251.1;Name=WP_020831251.1;Ontology_term=GO:0006203,GO:0008832;gbkey=CDS;go_function=dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596233.1;locus_tag=JYJ20_RS02445;product=anti-phage deoxyguanosine triphosphatase;protein_id=WP_020831251.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 31280 32599 . + . ID=gene-JYJ20_RS02450;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=JYJ20_RS02450 NZ_JAFIRP010000005.1 Protein Homology CDS 31280 32599 . + 0 ID=cds-WP_006249263.1;Parent=gene-JYJ20_RS02450;Dbxref=GenBank:WP_006249263.1;Name=WP_006249263.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249263.1;locus_tag=JYJ20_RS02450;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_006249263.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 32739 33920 . - . ID=gene-JYJ20_RS02455;Name=JYJ20_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02455 NZ_JAFIRP010000005.1 Protein Homology CDS 32739 33920 . - 0 ID=cds-WP_031200471.1;Parent=gene-JYJ20_RS02455;Dbxref=GenBank:WP_031200471.1;Name=WP_031200471.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249262.1;locus_tag=JYJ20_RS02455;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_031200471.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 33910 34611 . - . ID=gene-JYJ20_RS02460;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=JYJ20_RS02460 NZ_JAFIRP010000005.1 Protein Homology CDS 33910 34611 . - 0 ID=cds-WP_006249261.1;Parent=gene-JYJ20_RS02460;Dbxref=GenBank:WP_006249261.1;Name=WP_006249261.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484580.1;locus_tag=JYJ20_RS02460;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_006249261.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 34856 35827 . - . ID=gene-JYJ20_RS02465;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=JYJ20_RS02465 NZ_JAFIRP010000005.1 Protein Homology CDS 34856 35827 . - 0 ID=cds-WP_006249260.1;Parent=gene-JYJ20_RS02465;Dbxref=GenBank:WP_006249260.1;Name=WP_006249260.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249260.1;locus_tag=JYJ20_RS02465;product=o-succinylbenzoate synthase;protein_id=WP_006249260.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 36039 38117 . + . ID=gene-JYJ20_RS02470;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=JYJ20_RS02470 NZ_JAFIRP010000005.1 Protein Homology CDS 36039 38117 . + 0 ID=cds-WP_209025965.1;Parent=gene-JYJ20_RS02470;Dbxref=GenBank:WP_209025965.1;Name=WP_209025965.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651735.1;locus_tag=JYJ20_RS02470;product=methionine--tRNA ligase;protein_id=WP_209025965.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 38127 38543 . + . ID=gene-JYJ20_RS02475;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=JYJ20_RS02475 NZ_JAFIRP010000005.1 Protein Homology CDS 38127 38543 . + 0 ID=cds-WP_006249258.1;Parent=gene-JYJ20_RS02475;Dbxref=GenBank:WP_006249258.1;Name=WP_006249258.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596335.1;locus_tag=JYJ20_RS02475;product=nucleoside-diphosphate kinase;protein_id=WP_006249258.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 38599 39075 . - . ID=gene-JYJ20_RS02480;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=JYJ20_RS02480 NZ_JAFIRP010000005.1 Protein Homology CDS 38599 39075 . - 0 ID=cds-WP_006249257.1;Parent=gene-JYJ20_RS02480;Dbxref=GenBank:WP_006249257.1;Name=WP_006249257.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651790.1;locus_tag=JYJ20_RS02480;product=transcription elongation factor GreA;protein_id=WP_006249257.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 39172 40617 . + . ID=gene-JYJ20_RS02485;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=JYJ20_RS02485 NZ_JAFIRP010000005.1 Protein Homology CDS 39172 40617 . + 0 ID=cds-WP_021279398.1;Parent=gene-JYJ20_RS02485;Dbxref=GenBank:WP_021279398.1;Name=WP_021279398.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249256.1;locus_tag=JYJ20_RS02485;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_021279398.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 40704 40973 . - . ID=gene-JYJ20_RS02490;Name=JYJ20_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02490 NZ_JAFIRP010000005.1 Protein Homology CDS 40704 40973 . - 0 ID=cds-WP_006249255.1;Parent=gene-JYJ20_RS02490;Dbxref=GenBank:WP_006249255.1;Name=WP_006249255.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601284.1;locus_tag=JYJ20_RS02490;product=GNAT family N-acetyltransferase;protein_id=WP_006249255.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 41145 42734 . + . ID=gene-JYJ20_RS02495;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=JYJ20_RS02495 NZ_JAFIRP010000005.1 Protein Homology CDS 41145 42734 . + 0 ID=cds-WP_006249253.1;Parent=gene-JYJ20_RS02495;Dbxref=GenBank:WP_006249253.1;Name=WP_006249253.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005723614.1;locus_tag=JYJ20_RS02495;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_006249253.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 42789 44165 . - . ID=gene-JYJ20_RS02500;Name=JYJ20_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02500 NZ_JAFIRP010000005.1 Protein Homology CDS 42789 44165 . - 0 ID=cds-WP_209025966.1;Parent=gene-JYJ20_RS02500;Dbxref=GenBank:WP_209025966.1;Name=WP_209025966.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874606.1;locus_tag=JYJ20_RS02500;product=L-serine ammonia-lyase;protein_id=WP_209025966.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 44222 45448 . - . ID=gene-JYJ20_RS02505;Name=JYJ20_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02505 NZ_JAFIRP010000005.1 Protein Homology CDS 44222 45448 . - 0 ID=cds-WP_134916573.1;Parent=gene-JYJ20_RS02505;Dbxref=GenBank:WP_134916573.1;Name=WP_134916573.1;Ontology_term=GO:0006865,GO:0015171,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601171.1;locus_tag=JYJ20_RS02505;product=serine/threonine transporter;protein_id=WP_134916573.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 45718 46611 . - . ID=gene-JYJ20_RS02510;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=JYJ20_RS02510 NZ_JAFIRP010000005.1 Protein Homology CDS 45718 46611 . - 0 ID=cds-WP_006250561.1;Parent=gene-JYJ20_RS02510;Dbxref=GenBank:WP_006250561.1;Name=WP_006250561.1;Ontology_term=GO:0009085,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340884.1;locus_tag=JYJ20_RS02510;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_006250561.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 46701 47642 . - . ID=gene-JYJ20_RS02515;Name=JYJ20_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02515 NZ_JAFIRP010000005.1 Protein Homology CDS 46701 47642 . - 0 ID=cds-WP_006250560.1;Parent=gene-JYJ20_RS02515;Dbxref=GenBank:WP_006250560.1;Name=WP_006250560.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604585.1;locus_tag=JYJ20_RS02515;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=WP_006250560.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 47822 48106 . + . ID=gene-JYJ20_RS02520;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=JYJ20_RS02520 NZ_JAFIRP010000005.1 Protein Homology CDS 47822 48106 . + 0 ID=cds-WP_020831243.1;Parent=gene-JYJ20_RS02520;Dbxref=GenBank:WP_020831243.1;Name=WP_020831243.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005823326.1;locus_tag=JYJ20_RS02520;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_020831243.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 48282 48404 . - . ID=gene-JYJ20_RS02525;Name=JYJ20_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02525 NZ_JAFIRP010000005.1 Protein Homology CDS 48282 48404 . - 0 ID=cds-WP_006250558.1;Parent=gene-JYJ20_RS02525;Dbxref=GenBank:WP_006250558.1;Name=WP_006250558.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250558.1;locus_tag=JYJ20_RS02525;product=entericidin A/B family lipoprotein;protein_id=WP_006250558.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 48484 49461 . - . ID=gene-JYJ20_RS02530;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=JYJ20_RS02530 NZ_JAFIRP010000005.1 Protein Homology CDS 48484 49461 . - 0 ID=cds-WP_006250557.1;Parent=gene-JYJ20_RS02530;Dbxref=GenBank:WP_006250557.1;Name=WP_006250557.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652666.1;locus_tag=JYJ20_RS02530;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_006250557.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 49602 50381 . + . ID=gene-JYJ20_RS02535;Name=JYJ20_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02535 NZ_JAFIRP010000005.1 Protein Homology CDS 49602 50381 . + 0 ID=cds-WP_006253082.1;Parent=gene-JYJ20_RS02535;Dbxref=GenBank:WP_006253082.1;Name=WP_006253082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250556.1;locus_tag=JYJ20_RS02535;product=outer membrane protein assembly factor BamD;protein_id=WP_006253082.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 50454 51485 . + . ID=gene-JYJ20_RS02540;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=JYJ20_RS02540 NZ_JAFIRP010000005.1 Protein Homology CDS 50454 51485 . + 0 ID=cds-WP_006249246.1;Parent=gene-JYJ20_RS02540;Dbxref=GenBank:WP_006249246.1;Name=WP_006249246.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249246.1;locus_tag=JYJ20_RS02540;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_006249246.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 51567 52358 . + . ID=gene-JYJ20_RS02545;Name=JYJ20_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02545 NZ_JAFIRP010000005.1 Protein Homology CDS 51567 52358 . + 0 ID=cds-WP_006249245.1;Parent=gene-JYJ20_RS02545;Dbxref=GenBank:WP_006249245.1;Name=WP_006249245.1;Ontology_term=GO:1901271;gbkey=CDS;go_process=lipooligosaccharide biosynthetic process|1901271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253080.1;locus_tag=JYJ20_RS02545;product=glycosyltransferase family 25 protein;protein_id=WP_006249245.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 52369 52674 . + . ID=gene-JYJ20_RS02550;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=JYJ20_RS02550 NZ_JAFIRP010000005.1 Protein Homology CDS 52369 52674 . + 0 ID=cds-WP_006249244.1;Parent=gene-JYJ20_RS02550;Dbxref=GenBank:WP_006249244.1;Name=WP_006249244.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005612534.1;locus_tag=JYJ20_RS02550;product=iron donor protein CyaY;protein_id=WP_006249244.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 52783 54582 . + . ID=gene-JYJ20_RS02555;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=JYJ20_RS02555 NZ_JAFIRP010000005.1 Protein Homology CDS 52783 54582 . + 0 ID=cds-WP_006249243.1;Parent=gene-JYJ20_RS02555;Dbxref=GenBank:WP_006249243.1;Name=WP_006249243.1;Ontology_term=GO:0006310,GO:0009432,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249243.1;locus_tag=JYJ20_RS02555;product=DNA helicase RecQ;protein_id=WP_006249243.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 54741 55283 . + . ID=gene-JYJ20_RS02560;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=JYJ20_RS02560 NZ_JAFIRP010000005.1 Protein Homology CDS 54741 55283 . + 0 ID=cds-WP_075270716.1;Parent=gene-JYJ20_RS02560;Dbxref=GenBank:WP_075270716.1;Name=WP_075270716.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: protein motif:HMM:TIGR00168.2;locus_tag=JYJ20_RS02560;product=translation initiation factor IF-3;protein_id=WP_075270716.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 55547 55744 . + . ID=gene-JYJ20_RS02565;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=JYJ20_RS02565 NZ_JAFIRP010000005.1 Protein Homology CDS 55547 55744 . + 0 ID=cds-WP_006249241.1;Parent=gene-JYJ20_RS02565;Dbxref=GenBank:WP_006249241.1;Name=WP_006249241.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249241.1;locus_tag=JYJ20_RS02565;product=50S ribosomal protein L35;protein_id=WP_006249241.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 55853 56206 . + . ID=gene-JYJ20_RS02570;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=JYJ20_RS02570 NZ_JAFIRP010000005.1 Protein Homology CDS 55853 56206 . + 0 ID=cds-WP_006249240.1;Parent=gene-JYJ20_RS02570;Dbxref=GenBank:WP_006249240.1;Name=WP_006249240.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013745267.1;locus_tag=JYJ20_RS02570;product=50S ribosomal protein L20;protein_id=WP_006249240.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 56331 56606 . + . ID=gene-JYJ20_RS02575;Name=JYJ20_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02575 NZ_JAFIRP010000005.1 Protein Homology CDS 56331 56606 . + 0 ID=cds-WP_006249239.1;Parent=gene-JYJ20_RS02575;Dbxref=GenBank:WP_006249239.1;Name=WP_006249239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249239.1;locus_tag=JYJ20_RS02575;product=hypothetical protein;protein_id=WP_006249239.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 56611 58449 . - . ID=gene-JYJ20_RS02580;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=JYJ20_RS02580 NZ_JAFIRP010000005.1 Protein Homology CDS 56611 58449 . - 0 ID=cds-WP_006253077.1;Parent=gene-JYJ20_RS02580;Dbxref=GenBank:WP_006253077.1;Name=WP_006253077.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249237.1;locus_tag=JYJ20_RS02580;product=excinuclease ABC subunit UvrC;protein_id=WP_006253077.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 58527 59075 . - . ID=gene-JYJ20_RS02585;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=JYJ20_RS02585 NZ_JAFIRP010000005.1 Protein Homology CDS 58527 59075 . - 0 ID=cds-WP_006253707.1;Parent=gene-JYJ20_RS02585;Dbxref=GenBank:WP_006253707.1;Name=WP_006253707.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253707.1;locus_tag=JYJ20_RS02585;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_006253707.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 59281 59946 . + . ID=gene-JYJ20_RS02590;Name=JYJ20_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02590 NZ_JAFIRP010000005.1 Protein Homology CDS 59281 59946 . + 0 ID=cds-WP_006253076.1;Parent=gene-JYJ20_RS02590;Dbxref=GenBank:WP_006253076.1;Name=WP_006253076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005706734.1;locus_tag=JYJ20_RS02590;product=Bax inhibitor-1 family protein;protein_id=WP_006253076.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 59975 60325 . + . ID=gene-JYJ20_RS02595;Name=JYJ20_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02595 NZ_JAFIRP010000005.1 Protein Homology CDS 59975 60325 . + 0 ID=cds-WP_006250062.1;Parent=gene-JYJ20_RS02595;Dbxref=GenBank:WP_006250062.1;Name=WP_006250062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250545.1;locus_tag=JYJ20_RS02595;product=TusE/DsrC/DsvC family sulfur relay protein;protein_id=WP_006250062.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 60459 62306 . - . ID=gene-JYJ20_RS02600;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=JYJ20_RS02600 NZ_JAFIRP010000005.1 Protein Homology CDS 60459 62306 . - 0 ID=cds-WP_006253708.1;Parent=gene-JYJ20_RS02600;Dbxref=GenBank:WP_006253708.1;Name=WP_006253708.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012055207.1;locus_tag=JYJ20_RS02600;product=dihydroxy-acid dehydratase;protein_id=WP_006253708.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 62507 64000 . + . ID=gene-JYJ20_RS02605;Name=JYJ20_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02605 NZ_JAFIRP010000005.1 Protein Homology CDS 62507 64000 . + 0 ID=cds-WP_006253709.1;Parent=gene-JYJ20_RS02605;Dbxref=GenBank:WP_006253709.1;Name=WP_006253709.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005556599.1;locus_tag=JYJ20_RS02605;product=PTS transporter subunit EIIC;protein_id=WP_006253709.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 64092 65273 . - . ID=gene-JYJ20_RS02610;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=JYJ20_RS02610 NZ_JAFIRP010000005.1 Protein Homology CDS 64092 65273 . - 0 ID=cds-WP_006249956.1;Parent=gene-JYJ20_RS02610;Dbxref=GenBank:WP_006249956.1;Name=WP_006249956.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005615456.1;locus_tag=JYJ20_RS02610;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_006249956.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 65408 66046 . - . ID=gene-JYJ20_RS02615;Name=JYJ20_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02615 NZ_JAFIRP010000005.1 Protein Homology CDS 65408 66046 . - 0 ID=cds-WP_005719747.1;Parent=gene-JYJ20_RS02615;Dbxref=GenBank:WP_005719747.1;Name=WP_005719747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005719747.1;locus_tag=JYJ20_RS02615;product=DUF417 family protein;protein_id=WP_005719747.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 66106 66459 . - . ID=gene-JYJ20_RS02620;Name=JYJ20_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02620 NZ_JAFIRP010000005.1 Protein Homology CDS 66106 66459 . - 0 ID=cds-WP_006249955.1;Parent=gene-JYJ20_RS02620;Dbxref=GenBank:WP_006249955.1;Name=WP_006249955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249955.1;locus_tag=JYJ20_RS02620;product=rhodanese-like domain-containing protein;protein_id=WP_006249955.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 66470 66811 . - . ID=gene-JYJ20_RS02625;Name=JYJ20_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02625 NZ_JAFIRP010000005.1 Protein Homology CDS 66470 66811 . - 0 ID=cds-WP_006249954.1;Parent=gene-JYJ20_RS02625;Dbxref=GenBank:WP_006249954.1;Name=WP_006249954.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249954.1;locus_tag=JYJ20_RS02625;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_006249954.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 66947 67843 . + . ID=gene-JYJ20_RS02630;Name=JYJ20_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02630 NZ_JAFIRP010000005.1 Protein Homology CDS 66947 67843 . + 0 ID=cds-WP_209025967.1;Parent=gene-JYJ20_RS02630;Dbxref=GenBank:WP_209025967.1;Name=WP_209025967.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249953.1;locus_tag=JYJ20_RS02630;product=AraC family transcriptional regulator;protein_id=WP_209025967.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 68041 68604 . + . ID=gene-JYJ20_RS02635;Name=JYJ20_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02635 NZ_JAFIRP010000005.1 Protein Homology CDS 68041 68604 . + 0 ID=cds-WP_006250539.1;Parent=gene-JYJ20_RS02635;Dbxref=GenBank:WP_006250539.1;Name=WP_006250539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015433386.1;locus_tag=JYJ20_RS02635;product=acetate uptake transporter;protein_id=WP_006250539.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 68709 71144 . - . ID=gene-JYJ20_RS02640;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=JYJ20_RS02640 NZ_JAFIRP010000005.1 Protein Homology CDS 68709 71144 . - 0 ID=cds-WP_209025968.1;Parent=gene-JYJ20_RS02640;Dbxref=GenBank:WP_209025968.1;Name=WP_209025968.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249951.1;locus_tag=JYJ20_RS02640;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_209025968.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 71311 71946 . + . ID=gene-JYJ20_RS02645;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=JYJ20_RS02645 NZ_JAFIRP010000005.1 Protein Homology CDS 71311 71946 . + 0 ID=cds-WP_006250537.1;Parent=gene-JYJ20_RS02645;Dbxref=GenBank:WP_006250537.1;Name=WP_006250537.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250537.1;locus_tag=JYJ20_RS02645;product=transcriptional repressor LexA;protein_id=WP_006250537.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 72038 72718 . + . ID=gene-JYJ20_RS02650;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=JYJ20_RS02650 NZ_JAFIRP010000005.1 Protein Homology CDS 72038 72718 . + 0 ID=cds-WP_209025969.1;Parent=gene-JYJ20_RS02650;Dbxref=GenBank:WP_209025969.1;Name=WP_209025969.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005610420.1;locus_tag=JYJ20_RS02650;product=DNA mismatch repair endonuclease MutH;protein_id=WP_209025969.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 72807 73538 . + . ID=gene-JYJ20_RS02655;Name=JYJ20_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02655 NZ_JAFIRP010000005.1 Protein Homology CDS 72807 73538 . + 0 ID=cds-WP_006250611.1;Parent=gene-JYJ20_RS02655;Dbxref=GenBank:WP_006250611.1;Name=WP_006250611.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604847.1;locus_tag=JYJ20_RS02655;product=TerC family protein;protein_id=WP_006250611.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 73664 74701 . + . ID=gene-JYJ20_RS02660;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=JYJ20_RS02660 NZ_JAFIRP010000005.1 Protein Homology CDS 73664 74701 . + 0 ID=cds-WP_006249149.1;Parent=gene-JYJ20_RS02660;Dbxref=GenBank:WP_006249149.1;Name=WP_006249149.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249149.1;locus_tag=JYJ20_RS02660;product=beta-N-acetylhexosaminidase;protein_id=WP_006249149.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 74694 75872 . + . ID=gene-JYJ20_RS02665;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=JYJ20_RS02665 NZ_JAFIRP010000005.1 Protein Homology CDS 74694 75872 . + 0 ID=cds-WP_006253710.1;Parent=gene-JYJ20_RS02665;Dbxref=GenBank:WP_006253710.1;Name=WP_006253710.1;Ontology_term=GO:0000154,GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA,RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253710.1;locus_tag=JYJ20_RS02665;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_006253710.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 76063 77373 . + . ID=gene-JYJ20_RS02670;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=JYJ20_RS02670 NZ_JAFIRP010000005.1 Protein Homology CDS 76063 77373 . + 0 ID=cds-WP_209025970.1;Parent=gene-JYJ20_RS02670;Dbxref=GenBank:WP_209025970.1;Name=WP_209025970.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011199438.1;locus_tag=JYJ20_RS02670;product=phosphopyruvate hydratase;protein_id=WP_209025970.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 77439 77849 . + . ID=gene-JYJ20_RS02675;Name=JYJ20_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02675 NZ_JAFIRP010000005.1 Protein Homology CDS 77439 77849 . + 0 ID=cds-WP_006248783.1;Parent=gene-JYJ20_RS02675;Dbxref=GenBank:WP_006248783.1;Name=WP_006248783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005625316.1;locus_tag=JYJ20_RS02675;product=DUF2251 domain-containing protein;protein_id=WP_006248783.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 77890 78876 . - . ID=gene-JYJ20_RS02680;Name=JYJ20_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02680 NZ_JAFIRP010000005.1 Protein Homology CDS 77890 78876 . - 0 ID=cds-WP_209025971.1;Parent=gene-JYJ20_RS02680;Dbxref=GenBank:WP_209025971.1;Name=WP_209025971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251193.1;locus_tag=JYJ20_RS02680;product=dihydroorotate dehydrogenase;protein_id=WP_209025971.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 78943 80175 . - . ID=gene-JYJ20_RS02685;Name=JYJ20_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02685 NZ_JAFIRP010000005.1 Protein Homology CDS 78943 80175 . - 0 ID=cds-WP_006248781.1;Parent=gene-JYJ20_RS02685;Dbxref=GenBank:WP_006248781.1;Name=WP_006248781.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248781.1;locus_tag=JYJ20_RS02685;product=uracil-xanthine permease family protein;protein_id=WP_006248781.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 80438 81646 . - . ID=gene-JYJ20_RS02690;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=JYJ20_RS02690 NZ_JAFIRP010000005.1 Protein Homology CDS 80438 81646 . - 0 ID=cds-WP_006251194.1;Parent=gene-JYJ20_RS02690;Dbxref=GenBank:WP_006251194.1;Name=WP_006251194.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248780.1;locus_tag=JYJ20_RS02690;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_006251194.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 81636 82109 . - . ID=gene-JYJ20_RS02695;Name=JYJ20_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02695 NZ_JAFIRP010000005.1 Protein Homology CDS 81636 82109 . - 0 ID=cds-WP_006248779.1;Parent=gene-JYJ20_RS02695;Dbxref=GenBank:WP_006248779.1;Name=WP_006248779.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248779.1;locus_tag=JYJ20_RS02695;product=NUDIX hydrolase;protein_id=WP_006248779.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 82109 83149 . - . ID=gene-JYJ20_RS02700;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=JYJ20_RS02700 NZ_JAFIRP010000005.1 Protein Homology CDS 82109 83149 . - 0 ID=cds-WP_080542692.1;Parent=gene-JYJ20_RS02700;Dbxref=GenBank:WP_080542692.1;Name=WP_080542692.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=L-selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005556665.1;locus_tag=JYJ20_RS02700;product=selenide%2C water dikinase SelD;protein_id=WP_080542692.1;transl_except=(pos:complement(83102..83104)%2Caa:Sec);transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 83263 83481 . + . ID=gene-JYJ20_RS02705;Name=JYJ20_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02705 NZ_JAFIRP010000005.1 Protein Homology CDS 83263 83481 . + 0 ID=cds-WP_235658915.1;Parent=gene-JYJ20_RS02705;Dbxref=GenBank:WP_235658915.1;Name=WP_235658915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014326069.1;locus_tag=JYJ20_RS02705;product=hypothetical protein;protein_id=WP_235658915.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 83609 85540 . - . ID=gene-JYJ20_RS02710;Name=JYJ20_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02710 NZ_JAFIRP010000005.1 Protein Homology CDS 83609 85540 . - 0 ID=cds-WP_020831169.1;Parent=gene-JYJ20_RS02710;Dbxref=GenBank:WP_020831169.1;Name=WP_020831169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013744979.1;locus_tag=JYJ20_RS02710;product=GmrSD restriction endonuclease domain-containing protein;protein_id=WP_020831169.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 85521 86912 . - . ID=gene-JYJ20_RS02715;Name=JYJ20_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02715 NZ_JAFIRP010000005.1 Protein Homology CDS 85521 86912 . - 0 ID=cds-WP_142778345.1;Parent=gene-JYJ20_RS02715;Dbxref=GenBank:WP_142778345.1;Name=WP_142778345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015432795.1;locus_tag=JYJ20_RS02715;product=DUF262 domain-containing protein;protein_id=WP_142778345.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 86988 87809 . - . ID=gene-JYJ20_RS02720;Name=JYJ20_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02720 NZ_JAFIRP010000005.1 Protein Homology CDS 86988 87809 . - 0 ID=cds-WP_209025972.1;Parent=gene-JYJ20_RS02720;Dbxref=GenBank:WP_209025972.1;Name=WP_209025972.1;Ontology_term=GO:0008270,GO:0017136,GO:0046872,GO:0070403;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,histone deacetylase activity%2C NAD-dependent|0017136||IEA,metal ion binding|0046872||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251046.1;locus_tag=JYJ20_RS02720;product=SIR2 family NAD-dependent protein deacylase;protein_id=WP_209025972.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 87976 88617 . - . ID=gene-JYJ20_RS02725;Name=JYJ20_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02725 NZ_JAFIRP010000005.1 Protein Homology CDS 87976 88617 . - 0 ID=cds-WP_006251045.1;Parent=gene-JYJ20_RS02725;Dbxref=GenBank:WP_006251045.1;Name=WP_006251045.1;Ontology_term=GO:0006470,GO:0004722,GO:0046872;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA,metal ion binding|0046872||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251045.1;locus_tag=JYJ20_RS02725;product=PP2C family protein-serine/threonine phosphatase;protein_id=WP_006251045.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 88864 89826 . - . ID=gene-JYJ20_RS02730;Name=JYJ20_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02730 NZ_JAFIRP010000005.1 Protein Homology CDS 88864 89826 . - 0 ID=cds-WP_020831165.1;Parent=gene-JYJ20_RS02730;Dbxref=GenBank:WP_020831165.1;Name=WP_020831165.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005823743.1;locus_tag=JYJ20_RS02730;product=helix-turn-helix transcriptional regulator;protein_id=WP_020831165.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 90082 91180 . + . ID=gene-JYJ20_RS02735;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=JYJ20_RS02735 NZ_JAFIRP010000005.1 Protein Homology CDS 90082 90156 . + 0 ID=cds-WP_096000823.1;Parent=gene-JYJ20_RS02735;Dbxref=GenBank:WP_096000823.1;Name=WP_096000823.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550889.1;locus_tag=JYJ20_RS02735;product=peptide chain release factor 2;protein_id=WP_096000823.1;transl_table=11 NZ_JAFIRP010000005.1 Protein Homology CDS 90158 91180 . + 0 ID=cds-WP_096000823.1;Parent=gene-JYJ20_RS02735;Dbxref=GenBank:WP_096000823.1;Name=WP_096000823.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550889.1;locus_tag=JYJ20_RS02735;product=peptide chain release factor 2;protein_id=WP_096000823.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 91283 92263 . + . ID=gene-JYJ20_RS02740;Name=JYJ20_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02740 NZ_JAFIRP010000005.1 Protein Homology CDS 91283 92263 . + 0 ID=cds-WP_006248774.1;Parent=gene-JYJ20_RS02740;Dbxref=GenBank:WP_006248774.1;Name=WP_006248774.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252523.1;locus_tag=JYJ20_RS02740;product=AEC family transporter;protein_id=WP_006248774.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 92285 93370 . + . ID=gene-JYJ20_RS02745;Name=JYJ20_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02745 NZ_JAFIRP010000005.1 Protein Homology CDS 92285 93370 . + 0 ID=cds-WP_006248773.1;Parent=gene-JYJ20_RS02745;Dbxref=GenBank:WP_006248773.1;Name=WP_006248773.1;Ontology_term=GO:0016311,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248773.1;locus_tag=JYJ20_RS02745;product=metallophosphoesterase;protein_id=WP_006248773.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 93456 94307 . - . ID=gene-JYJ20_RS02750;Name=JYJ20_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02750 NZ_JAFIRP010000005.1 Protein Homology CDS 93456 94307 . - 0 ID=cds-WP_006251039.1;Parent=gene-JYJ20_RS02750;Dbxref=GenBank:WP_006251039.1;Name=WP_006251039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251039.1;locus_tag=JYJ20_RS02750;product=DUF817 domain-containing protein;protein_id=WP_006251039.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 94520 95566 . + . ID=gene-JYJ20_RS02755;Name=galT;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=JYJ20_RS02755 NZ_JAFIRP010000005.1 Protein Homology CDS 94520 95566 . + 0 ID=cds-WP_209025973.1;Parent=gene-JYJ20_RS02755;Dbxref=GenBank:WP_209025973.1;Name=WP_209025973.1;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252519.1;locus_tag=JYJ20_RS02755;product=galactose-1-phosphate uridylyltransferase;protein_id=WP_209025973.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 95576 96739 . + . ID=gene-JYJ20_RS02760;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=JYJ20_RS02760 NZ_JAFIRP010000005.1 Protein Homology CDS 95576 96739 . + 0 ID=cds-WP_006249146.1;Parent=gene-JYJ20_RS02760;Dbxref=GenBank:WP_006249146.1;Name=WP_006249146.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249146.1;locus_tag=JYJ20_RS02760;product=galactokinase;protein_id=WP_006249146.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 96865 97833 . + . ID=gene-JYJ20_RS02765;Name=JYJ20_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02765 NZ_JAFIRP010000005.1 Protein Homology CDS 96865 97833 . + 0 ID=cds-WP_006249145.1;Parent=gene-JYJ20_RS02765;Dbxref=GenBank:WP_006249145.1;Name=WP_006249145.1;Ontology_term=GO:0005975,GO:0016853,GO:0030246;gbkey=CDS;go_function=isomerase activity|0016853||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249145.1;locus_tag=JYJ20_RS02765;product=galactose-1-epimerase;protein_id=WP_006249145.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 97874 98431 . - . ID=gene-JYJ20_RS02770;Name=JYJ20_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02770 NZ_JAFIRP010000005.1 Protein Homology CDS 97874 98431 . - 0 ID=cds-WP_006249144.1;Parent=gene-JYJ20_RS02770;Dbxref=GenBank:WP_006249144.1;Name=WP_006249144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249144.1;locus_tag=JYJ20_RS02770;product=YtfJ family protein;protein_id=WP_006249144.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 98632 98925 . + . ID=gene-JYJ20_RS02775;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=JYJ20_RS02775 NZ_JAFIRP010000005.1 Protein Homology CDS 98632 98925 . + 0 ID=cds-WP_006249142.1;Parent=gene-JYJ20_RS02775;Dbxref=GenBank:WP_006249142.1;Name=WP_006249142.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005713354.1;locus_tag=JYJ20_RS02775;product=preprotein translocase subunit YajC;protein_id=WP_006249142.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 98965 100806 . + . ID=gene-JYJ20_RS02780;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=JYJ20_RS02780 NZ_JAFIRP010000005.1 Protein Homology CDS 98965 100806 . + 0 ID=cds-WP_075271762.1;Parent=gene-JYJ20_RS02780;Dbxref=GenBank:WP_075271762.1;Name=WP_075271762.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014702293.1;locus_tag=JYJ20_RS02780;product=protein translocase subunit SecD;protein_id=WP_075271762.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 100816 101790 . + . ID=gene-JYJ20_RS02785;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=JYJ20_RS02785 NZ_JAFIRP010000005.1 Protein Homology CDS 100816 101790 . + 0 ID=cds-WP_006249140.1;Parent=gene-JYJ20_RS02785;Dbxref=GenBank:WP_006249140.1;Name=WP_006249140.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249140.1;locus_tag=JYJ20_RS02785;product=protein translocase subunit SecF;protein_id=WP_006249140.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 101923 103224 . + . ID=gene-JYJ20_RS02790;Name=JYJ20_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02790 NZ_JAFIRP010000005.1 Protein Homology CDS 101923 103224 . + 0 ID=cds-WP_006249139.1;Parent=gene-JYJ20_RS02790;Dbxref=GenBank:WP_006249139.1;Name=WP_006249139.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991097.1;locus_tag=JYJ20_RS02790;product=NCS2 family permease;protein_id=WP_006249139.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 103345 103671 . - . ID=gene-JYJ20_RS02795;Name=JYJ20_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02795 NZ_JAFIRP010000005.1 Protein Homology CDS 103345 103671 . - 0 ID=cds-WP_006249138.1;Parent=gene-JYJ20_RS02795;Dbxref=GenBank:WP_006249138.1;Name=WP_006249138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249138.1;locus_tag=JYJ20_RS02795;product=AzlD domain-containing protein;protein_id=WP_006249138.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 103658 104356 . - . ID=gene-JYJ20_RS02800;Name=JYJ20_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02800 NZ_JAFIRP010000005.1 Protein Homology CDS 103658 104356 . - 0 ID=cds-WP_006249137.1;Parent=gene-JYJ20_RS02800;Dbxref=GenBank:WP_006249137.1;Name=WP_006249137.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249137.1;locus_tag=JYJ20_RS02800;product=AzlC family ABC transporter permease;protein_id=WP_006249137.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 104578 105615 . + . ID=gene-JYJ20_RS02805;Name=JYJ20_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02805 NZ_JAFIRP010000005.1 Protein Homology CDS 104578 105615 . + 0 ID=cds-WP_061887163.1;Parent=gene-JYJ20_RS02805;Dbxref=GenBank:WP_061887163.1;Name=WP_061887163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251031.1;locus_tag=JYJ20_RS02805;product=ABC transporter substrate-binding protein;protein_id=WP_061887163.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 105702 106982 . - . ID=gene-JYJ20_RS02810;Name=JYJ20_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02810 NZ_JAFIRP010000005.1 Protein Homology CDS 105702 106982 . - 0 ID=cds-WP_006249135.1;Parent=gene-JYJ20_RS02810;Dbxref=GenBank:WP_006249135.1;Name=WP_006249135.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005693148.1;locus_tag=JYJ20_RS02810;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_006249135.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 107087 107581 . - . ID=gene-JYJ20_RS02815;Name=JYJ20_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02815 NZ_JAFIRP010000005.1 Protein Homology CDS 107087 107581 . - 0 ID=cds-WP_006249134.1;Parent=gene-JYJ20_RS02815;Dbxref=GenBank:WP_006249134.1;Name=WP_006249134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249134.1;locus_tag=JYJ20_RS02815;product=SprT family zinc-dependent metalloprotease;protein_id=WP_006249134.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 107581 108294 . - . ID=gene-JYJ20_RS02820;Name=JYJ20_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02820 NZ_JAFIRP010000005.1 Protein Homology CDS 107581 108294 . - 0 ID=cds-WP_006249133.1;Parent=gene-JYJ20_RS02820;Dbxref=GenBank:WP_006249133.1;Name=WP_006249133.1;Ontology_term=GO:0003723,GO:0033897;gbkey=CDS;go_function=RNA binding|0003723||IEA,ribonuclease T2 activity|0033897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252511.1;locus_tag=JYJ20_RS02820;product=ribonuclease T2 family protein;protein_id=WP_006249133.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 108384 108701 . - . ID=gene-JYJ20_RS02825;Name=JYJ20_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02825 NZ_JAFIRP010000005.1 Protein Homology CDS 108384 108701 . - 0 ID=cds-WP_006249132.1;Parent=gene-JYJ20_RS02825;Dbxref=GenBank:WP_006249132.1;Name=WP_006249132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249132.1;locus_tag=JYJ20_RS02825;product=TfoX/Sxy family protein;protein_id=WP_006249132.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 108761 109603 . + . ID=gene-JYJ20_RS02830;Name=JYJ20_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02830 NZ_JAFIRP010000005.1 Protein Homology CDS 108761 109603 . + 0 ID=cds-WP_006249131.1;Parent=gene-JYJ20_RS02830;Dbxref=GenBank:WP_006249131.1;Name=WP_006249131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252509.1;locus_tag=JYJ20_RS02830;product=patatin-like phospholipase family protein;protein_id=WP_006249131.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 109786 110937 . + . ID=gene-JYJ20_RS02835;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=JYJ20_RS02835 NZ_JAFIRP010000005.1 Protein Homology CDS 109786 110937 . + 0 ID=cds-WP_006249130.1;Parent=gene-JYJ20_RS02835;Dbxref=GenBank:WP_006249130.1;Name=WP_006249130.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601538.1;locus_tag=JYJ20_RS02835;product=methionine adenosyltransferase;protein_id=WP_006249130.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 110982 111773 . - . ID=gene-JYJ20_RS02840;Name=metQ;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=JYJ20_RS02840 NZ_JAFIRP010000005.1 Protein Homology CDS 110982 111773 . - 0 ID=cds-WP_006249129.1;Parent=gene-JYJ20_RS02840;Dbxref=GenBank:WP_006249129.1;Name=WP_006249129.1;gbkey=CDS;gene=metQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251027.1;locus_tag=JYJ20_RS02840;product=methionine ABC transporter substrate-binding lipoprotein MetQ;protein_id=WP_006249129.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 111834 112664 . - . ID=gene-JYJ20_RS02845;Name=JYJ20_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02845 NZ_JAFIRP010000005.1 Protein Homology CDS 111834 112664 . - 0 ID=cds-WP_006249128.1;Parent=gene-JYJ20_RS02845;Dbxref=GenBank:WP_006249128.1;Name=WP_006249128.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249128.1;locus_tag=JYJ20_RS02845;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_006249128.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 112747 113580 . - . ID=gene-JYJ20_RS02850;Name=JYJ20_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02850 NZ_JAFIRP010000005.1 Protein Homology CDS 112747 113580 . - 0 ID=cds-WP_006249127.1;Parent=gene-JYJ20_RS02850;Dbxref=GenBank:WP_006249127.1;Name=WP_006249127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874634.1;locus_tag=JYJ20_RS02850;product=MetQ/NlpA family lipoprotein;protein_id=WP_006249127.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 113603 114280 . - . ID=gene-JYJ20_RS02855;Name=JYJ20_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02855 NZ_JAFIRP010000005.1 Protein Homology CDS 113603 114280 . - 0 ID=cds-WP_006249126.1;Parent=gene-JYJ20_RS02855;Dbxref=GenBank:WP_006249126.1;Name=WP_006249126.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597560.1;locus_tag=JYJ20_RS02855;product=methionine ABC transporter permease;protein_id=WP_006249126.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 114270 115304 . - . ID=gene-JYJ20_RS02860;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=JYJ20_RS02860 NZ_JAFIRP010000005.1 Protein Homology CDS 114270 115304 . - 0 ID=cds-WP_006249125.1;Parent=gene-JYJ20_RS02860;Dbxref=GenBank:WP_006249125.1;Name=WP_006249125.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991200.1;locus_tag=JYJ20_RS02860;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_006249125.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 115527 117074 . - . ID=gene-JYJ20_RS02865;Name=JYJ20_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02865 NZ_JAFIRP010000005.1 Protein Homology CDS 115527 117074 . - 0 ID=cds-WP_006249124.1;Parent=gene-JYJ20_RS02865;Dbxref=GenBank:WP_006249124.1;Name=WP_006249124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251024.1;locus_tag=JYJ20_RS02865;product=ATP-dependent nuclease;protein_id=WP_006249124.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 117094 118461 . - . ID=gene-JYJ20_RS02870;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=JYJ20_RS02870 NZ_JAFIRP010000005.1 Protein Homology CDS 117094 118461 . - 0 ID=cds-WP_006249123.1;Parent=gene-JYJ20_RS02870;Dbxref=GenBank:WP_006249123.1;Name=WP_006249123.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249123.1;locus_tag=JYJ20_RS02870;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_006249123.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 118508 119266 . - . ID=gene-JYJ20_RS02875;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=JYJ20_RS02875 NZ_JAFIRP010000005.1 Protein Homology CDS 118508 119266 . - 0 ID=cds-WP_006249122.1;Parent=gene-JYJ20_RS02875;Dbxref=GenBank:WP_006249122.1;Name=WP_006249122.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249122.1;locus_tag=JYJ20_RS02875;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_006249122.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 119348 121312 . - . ID=gene-JYJ20_RS02880;Name=JYJ20_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02880 NZ_JAFIRP010000005.1 Protein Homology CDS 119348 121312 . - 0 ID=cds-WP_209025974.1;Parent=gene-JYJ20_RS02880;Dbxref=GenBank:WP_209025974.1;Name=WP_209025974.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600393.1;locus_tag=JYJ20_RS02880;product=ABC transporter ATP-binding protein;protein_id=WP_209025974.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 121407 124103 . - . ID=gene-JYJ20_RS02885;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=JYJ20_RS02885 NZ_JAFIRP010000005.1 Protein Homology CDS 121407 124103 . - 0 ID=cds-WP_209025975.1;Parent=gene-JYJ20_RS02885;Dbxref=GenBank:WP_209025975.1;Name=WP_209025975.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611398.1;locus_tag=JYJ20_RS02885;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_209025975.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 124200 124580 . - . ID=gene-JYJ20_RS02890;Name=JYJ20_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02890 NZ_JAFIRP010000005.1 Protein Homology CDS 124200 124580 . - 0 ID=cds-WP_006249118.1;Parent=gene-JYJ20_RS02890;Dbxref=GenBank:WP_006249118.1;Name=WP_006249118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249118.1;locus_tag=JYJ20_RS02890;product=pyrimidine dimer DNA glycosylase/endonuclease V;protein_id=WP_006249118.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 124645 125358 . + . ID=gene-JYJ20_RS02895;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=JYJ20_RS02895 NZ_JAFIRP010000005.1 Protein Homology CDS 124645 125358 . + 0 ID=cds-WP_006249117.1;Parent=gene-JYJ20_RS02895;Dbxref=GenBank:WP_006249117.1;Name=WP_006249117.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249117.1;locus_tag=JYJ20_RS02895;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_006249117.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 125421 126359 . + . ID=gene-JYJ20_RS02900;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=JYJ20_RS02900 NZ_JAFIRP010000005.1 Protein Homology CDS 125421 126359 . + 0 ID=cds-WP_006249116.1;Parent=gene-JYJ20_RS02900;Dbxref=GenBank:WP_006249116.1;Name=WP_006249116.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251014.1;locus_tag=JYJ20_RS02900;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_006249116.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 126407 126991 . - . ID=gene-JYJ20_RS02905;Name=JYJ20_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02905 NZ_JAFIRP010000005.1 Protein Homology CDS 126407 126991 . - 0 ID=cds-WP_006251013.1;Parent=gene-JYJ20_RS02905;Dbxref=GenBank:WP_006251013.1;Name=WP_006251013.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251013.1;locus_tag=JYJ20_RS02905;product=response regulator;protein_id=WP_006251013.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 127077 128735 . - . ID=gene-JYJ20_RS02910;Name=JYJ20_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02910 NZ_JAFIRP010000005.1 Protein Homology CDS 127077 128735 . - 0 ID=cds-WP_006251012.1;Parent=gene-JYJ20_RS02910;Dbxref=GenBank:WP_006251012.1;Name=WP_006251012.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249114.1;locus_tag=JYJ20_RS02910;product=sensor histidine kinase;protein_id=WP_006251012.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 128735 129151 . - . ID=gene-JYJ20_RS02915;Name=JYJ20_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02915 NZ_JAFIRP010000005.1 Protein Homology CDS 128735 129151 . - 0 ID=cds-WP_006249113.1;Parent=gene-JYJ20_RS02915;Dbxref=GenBank:WP_006249113.1;Name=WP_006249113.1;Ontology_term=GO:0004521,GO:0005515;gbkey=CDS;go_function=RNA endonuclease activity|0004521||IEA,protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251011.1;locus_tag=JYJ20_RS02915;product=putative toxin-antitoxin system toxin component%2C PIN family;protein_id=WP_006249113.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 129141 129437 . - . ID=gene-JYJ20_RS02920;Name=JYJ20_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02920 NZ_JAFIRP010000005.1 Protein Homology CDS 129141 129437 . - 0 ID=cds-WP_006249112.1;Parent=gene-JYJ20_RS02920;Dbxref=GenBank:WP_006249112.1;Name=WP_006249112.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249112.1;locus_tag=JYJ20_RS02920;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_006249112.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 129793 131511 . + . ID=gene-JYJ20_RS02925;Name=JYJ20_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02925 NZ_JAFIRP010000005.1 Protein Homology CDS 129793 131511 . + 0 ID=cds-WP_209025976.1;Parent=gene-JYJ20_RS02925;Dbxref=GenBank:WP_209025976.1;Name=WP_209025976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249111.1;locus_tag=JYJ20_RS02925;product=hypothetical protein;protein_id=WP_209025976.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 131876 132604 . + . ID=gene-JYJ20_RS02930;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=JYJ20_RS02930 NZ_JAFIRP010000005.1 Protein Homology CDS 131876 132604 . + 0 ID=cds-WP_209025977.1;Parent=gene-JYJ20_RS02930;Dbxref=GenBank:WP_209025977.1;Name=WP_209025977.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249109.1;locus_tag=JYJ20_RS02930;product=tetrathionate reductase subunit TtrB;protein_id=WP_209025977.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 132606 133637 . + . ID=gene-JYJ20_RS02935;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=JYJ20_RS02935 NZ_JAFIRP010000005.1 Protein Homology CDS 132606 133637 . + 0 ID=cds-WP_006249108.1;Parent=gene-JYJ20_RS02935;Dbxref=GenBank:WP_006249108.1;Name=WP_006249108.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251008.1;locus_tag=JYJ20_RS02935;product=NrfD/PsrC family molybdoenzyme membrane anchor subunit;protein_id=WP_006249108.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 133627 136722 . + . ID=gene-JYJ20_RS02940;Name=JYJ20_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02940 NZ_JAFIRP010000005.1 Protein Homology CDS 133627 136722 . + 0 ID=cds-WP_209025978.1;Parent=gene-JYJ20_RS02940;Dbxref=GenBank:WP_209025978.1;Name=WP_209025978.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251007.1;locus_tag=JYJ20_RS02940;product=tetrathionate reductase subunit A;protein_id=WP_209025978.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 136863 137708 . + . ID=gene-JYJ20_RS02945;Name=JYJ20_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02945 NZ_JAFIRP010000005.1 Protein Homology CDS 136863 137708 . + 0 ID=cds-WP_006249106.1;Parent=gene-JYJ20_RS02945;Dbxref=GenBank:WP_006249106.1;Name=WP_006249106.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249106.1;locus_tag=JYJ20_RS02945;product=MBL fold metallo-hydrolase;protein_id=WP_006249106.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 137821 139218 . - . ID=gene-JYJ20_RS02950;Name=tdeA;gbkey=Gene;gene=tdeA;gene_biotype=protein_coding;locus_tag=JYJ20_RS02950 NZ_JAFIRP010000005.1 Protein Homology CDS 137821 139218 . - 0 ID=cds-WP_006249104.1;Parent=gene-JYJ20_RS02950;Dbxref=GenBank:WP_006249104.1;Name=WP_006249104.1;Ontology_term=GO:0006811,GO:0046677,GO:0015288,GO:0015562;gbkey=CDS;gene=tdeA;go_function=porin activity|0015288||IEA,efflux transmembrane transporter activity|0015562||IEA;go_process=monoatomic ion transport|0006811||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596137.1;locus_tag=JYJ20_RS02950;product=toxin/drug exporter TdeA;protein_id=WP_006249104.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 139308 139931 . - . ID=gene-JYJ20_RS02955;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=JYJ20_RS02955 NZ_JAFIRP010000005.1 Protein Homology CDS 139308 139931 . - 0 ID=cds-WP_006249103.1;Parent=gene-JYJ20_RS02955;Dbxref=GenBank:WP_006249103.1;Name=WP_006249103.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249103.1;locus_tag=JYJ20_RS02955;product=guanylate kinase;protein_id=WP_006249103.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 140044 140517 . - . ID=gene-JYJ20_RS02960;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=JYJ20_RS02960 NZ_JAFIRP010000005.1 Protein Homology CDS 140044 140517 . - 0 ID=cds-WP_006251004.1;Parent=gene-JYJ20_RS02960;Dbxref=GenBank:WP_006251004.1;Name=WP_006251004.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596130.1;locus_tag=JYJ20_RS02960;product=xanthine phosphoribosyltransferase;protein_id=WP_006251004.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 140663 142072 . - . ID=gene-JYJ20_RS02965;Name=JYJ20_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02965 NZ_JAFIRP010000005.1 Protein Homology CDS 140663 142072 . - 0 ID=cds-WP_209025979.1;Parent=gene-JYJ20_RS02965;Dbxref=GenBank:WP_209025979.1;Name=WP_209025979.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249102.1;locus_tag=JYJ20_RS02965;product=surface lipoprotein assembly modifier;protein_id=WP_209025979.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 142268 143308 . - . ID=gene-JYJ20_RS02970;Name=JYJ20_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02970 NZ_JAFIRP010000005.1 Protein Homology CDS 142268 143308 . - 0 ID=cds-WP_209025980.1;Parent=gene-JYJ20_RS02970;Dbxref=GenBank:WP_209025980.1;Name=WP_209025980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249101.1;locus_tag=JYJ20_RS02970;product=factor H binding protein domain-containing protein;protein_id=WP_209025980.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 143511 144965 . + . ID=gene-JYJ20_RS02975;Name=JYJ20_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02975 NZ_JAFIRP010000005.1 Protein Homology CDS 143511 144965 . + 0 ID=cds-WP_006249099.1;Parent=gene-JYJ20_RS02975;Dbxref=GenBank:WP_006249099.1;Name=WP_006249099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251001.1;locus_tag=JYJ20_RS02975;product=aminoacyl-histidine dipeptidase;protein_id=WP_006249099.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 145040 146329 . - . ID=gene-JYJ20_RS02980;Name=JYJ20_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02980 NZ_JAFIRP010000005.1 Protein Homology CDS 145040 146329 . - 0 ID=cds-WP_006249098.1;Parent=gene-JYJ20_RS02980;Dbxref=GenBank:WP_006249098.1;Name=WP_006249098.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249098.1;locus_tag=JYJ20_RS02980;product=MFS transporter;protein_id=WP_006249098.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 146533 146868 . - . ID=gene-JYJ20_RS02985;Name=JYJ20_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02985 NZ_JAFIRP010000005.1 Protein Homology CDS 146533 146868 . - 0 ID=cds-WP_006249096.1;Parent=gene-JYJ20_RS02985;Dbxref=GenBank:WP_006249096.1;Name=WP_006249096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250999.1;locus_tag=JYJ20_RS02985;product=RnfH family protein;protein_id=WP_006249096.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 146858 147292 . - . ID=gene-JYJ20_RS02990;Name=JYJ20_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS02990 NZ_JAFIRP010000005.1 Protein Homology CDS 146858 147292 . - 0 ID=cds-WP_006249095.1;Parent=gene-JYJ20_RS02990;Dbxref=GenBank:WP_006249095.1;Name=WP_006249095.1;Ontology_term=GO:0045333,GO:0045947,GO:0043023,GO:0048039;gbkey=CDS;go_function=ribosomal large subunit binding|0043023||IEA,ubiquinone binding|0048039||IEA;go_process=cellular respiration|0045333||IEA,negative regulation of translational initiation|0045947||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596141.1;locus_tag=JYJ20_RS02990;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_006249095.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 147347 148402 . - . ID=gene-JYJ20_RS02995;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=JYJ20_RS02995 NZ_JAFIRP010000005.1 Protein Homology CDS 147347 148402 . - 0 ID=cds-WP_006249094.1;Parent=gene-JYJ20_RS02995;Dbxref=GenBank:WP_006249094.1;Name=WP_006249094.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875448.1;locus_tag=JYJ20_RS02995;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_006249094.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 148389 149081 . - . ID=gene-JYJ20_RS03000;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=JYJ20_RS03000 NZ_JAFIRP010000005.1 Protein Homology CDS 148389 149081 . - 0 ID=cds-WP_015484569.1;Parent=gene-JYJ20_RS03000;Dbxref=GenBank:WP_015484569.1;Name=WP_015484569.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484569.1;locus_tag=JYJ20_RS03000;product=molybdate ABC transporter permease subunit;protein_id=WP_015484569.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 149265 150020 . - . ID=gene-JYJ20_RS03005;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=JYJ20_RS03005 NZ_JAFIRP010000005.1 Protein Homology CDS 149265 150020 . - 0 ID=cds-WP_006249092.1;Parent=gene-JYJ20_RS03005;Dbxref=GenBank:WP_006249092.1;Name=WP_006249092.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596146.1;locus_tag=JYJ20_RS03005;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_006249092.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 150041 150802 . - . ID=gene-JYJ20_RS03010;Name=JYJ20_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03010 NZ_JAFIRP010000005.1 Protein Homology CDS 150041 150802 . - 0 ID=cds-WP_006249091.1;Parent=gene-JYJ20_RS03010;Dbxref=GenBank:WP_006249091.1;Name=WP_006249091.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007523083.1;locus_tag=JYJ20_RS03010;product=ABC transporter permease;protein_id=WP_006249091.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 150804 151712 . - . ID=gene-JYJ20_RS03015;Name=JYJ20_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03015 NZ_JAFIRP010000005.1 Protein Homology CDS 150804 151712 . - 0 ID=cds-WP_006249090.1;Parent=gene-JYJ20_RS03015;Dbxref=GenBank:WP_006249090.1;Name=WP_006249090.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249090.1;locus_tag=JYJ20_RS03015;product=ABC transporter ATP-binding protein;protein_id=WP_006249090.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 151718 153775 . - . ID=gene-JYJ20_RS03020;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=JYJ20_RS03020 NZ_JAFIRP010000005.1 Protein Homology CDS 151718 153775 . - 0 ID=cds-WP_061888590.1;Parent=gene-JYJ20_RS03020;Dbxref=GenBank:WP_061888590.1;Name=WP_061888590.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250995.1;locus_tag=JYJ20_RS03020;product=DNA polymerase III subunit gamma/tau;protein_id=WP_061888590.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 153866 154405 . - . ID=gene-JYJ20_RS03025;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=JYJ20_RS03025 NZ_JAFIRP010000005.1 Protein Homology CDS 153866 154405 . - 0 ID=cds-WP_006249088.1;Parent=gene-JYJ20_RS03025;Dbxref=GenBank:WP_006249088.1;Name=WP_006249088.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991082.1;locus_tag=JYJ20_RS03025;product=adenine phosphoribosyltransferase;protein_id=WP_006249088.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 154533 155483 . - . ID=gene-JYJ20_RS03030;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=JYJ20_RS03030 NZ_JAFIRP010000005.1 Protein Homology CDS 154533 155483 . - 0 ID=cds-WP_006249087.1;Parent=gene-JYJ20_RS03030;Dbxref=GenBank:WP_006249087.1;Name=WP_006249087.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249087.1;locus_tag=JYJ20_RS03030;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_006249087.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 155924 156607 . - . ID=gene-JYJ20_RS03035;Name=JYJ20_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03035 NZ_JAFIRP010000005.1 Protein Homology CDS 155924 156607 . - 0 ID=cds-WP_006249085.1;Parent=gene-JYJ20_RS03035;Dbxref=GenBank:WP_006249085.1;Name=WP_006249085.1;Ontology_term=GO:0022900;gbkey=CDS;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005624031.1;locus_tag=JYJ20_RS03035;product=electron transport complex subunit E;protein_id=WP_006249085.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 156616 157248 . - . ID=gene-JYJ20_RS03040;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=JYJ20_RS03040 NZ_JAFIRP010000005.1 Protein Homology CDS 156616 157248 . - 0 ID=cds-WP_006249084.1;Parent=gene-JYJ20_RS03040;Dbxref=GenBank:WP_006249084.1;Name=WP_006249084.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600201.1;locus_tag=JYJ20_RS03040;product=electron transport complex subunit RsxG;protein_id=WP_006249084.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 157248 158303 . - . ID=gene-JYJ20_RS03045;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=JYJ20_RS03045 NZ_JAFIRP010000005.1 Protein Homology CDS 157248 158303 . - 0 ID=cds-WP_006249083.1;Parent=gene-JYJ20_RS03045;Dbxref=GenBank:WP_006249083.1;Name=WP_006249083.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249083.1;locus_tag=JYJ20_RS03045;product=electron transport complex subunit RsxD;protein_id=WP_006249083.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 158349 158984 . - . ID=gene-JYJ20_RS03050;Name=JYJ20_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03050 NZ_JAFIRP010000005.1 Protein Homology CDS 158349 158984 . - 0 ID=cds-WP_209025981.1;Parent=gene-JYJ20_RS03050;Dbxref=GenBank:WP_209025981.1;Name=WP_209025981.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249082.1;locus_tag=JYJ20_RS03050;product=trimeric intracellular cation channel family protein;protein_id=WP_209025981.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 158977 161271 . - . ID=gene-JYJ20_RS03055;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=JYJ20_RS03055 NZ_JAFIRP010000005.1 Protein Homology CDS 158977 161271 . - 0 ID=cds-WP_006249081.1;Parent=gene-JYJ20_RS03055;Dbxref=GenBank:WP_006249081.1;Name=WP_006249081.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249081.1;locus_tag=JYJ20_RS03055;product=electron transport complex subunit RsxC;protein_id=WP_006249081.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 161258 161875 . - . ID=gene-JYJ20_RS03060;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=JYJ20_RS03060 NZ_JAFIRP010000005.1 Protein Homology CDS 161258 161875 . - 0 ID=cds-WP_006249080.1;Parent=gene-JYJ20_RS03060;Dbxref=GenBank:WP_006249080.1;Name=WP_006249080.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251908.1;locus_tag=JYJ20_RS03060;product=electron transport complex subunit RsxB;protein_id=WP_006249080.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 161875 162456 . - . ID=gene-JYJ20_RS03065;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=JYJ20_RS03065 NZ_JAFIRP010000005.1 Protein Homology CDS 161875 162456 . - 0 ID=cds-WP_006249079.1;Parent=gene-JYJ20_RS03065;Dbxref=GenBank:WP_006249079.1;Name=WP_006249079.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011609214.1;locus_tag=JYJ20_RS03065;product=electron transport complex subunit RsxA;protein_id=WP_006249079.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 162771 163256 . - . ID=gene-JYJ20_RS03070;Name=JYJ20_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03070 NZ_JAFIRP010000005.1 Protein Homology CDS 162771 163256 . - 0 ID=cds-WP_006249078.1;Parent=gene-JYJ20_RS03070;Dbxref=GenBank:WP_006249078.1;Name=WP_006249078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249078.1;locus_tag=JYJ20_RS03070;product=hypothetical protein;protein_id=WP_006249078.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 163284 163655 . - . ID=gene-JYJ20_RS03075;Name=JYJ20_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03075 NZ_JAFIRP010000005.1 Protein Homology CDS 163284 163655 . - 0 ID=cds-WP_040080643.1;Parent=gene-JYJ20_RS03075;Dbxref=GenBank:WP_040080643.1;Name=WP_040080643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249077.1;locus_tag=JYJ20_RS03075;product=hypothetical protein;protein_id=WP_040080643.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 163673 164842 . - . ID=gene-JYJ20_RS03080;Name=JYJ20_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03080 NZ_JAFIRP010000005.1 Protein Homology CDS 163673 164842 . - 0 ID=cds-WP_209025982.1;Parent=gene-JYJ20_RS03080;Dbxref=GenBank:WP_209025982.1;Name=WP_209025982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249076.1;locus_tag=JYJ20_RS03080;product=hypothetical protein;protein_id=WP_209025982.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 164852 165331 . - . ID=gene-JYJ20_RS03085;Name=JYJ20_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03085 NZ_JAFIRP010000005.1 Protein Homology CDS 164852 165331 . - 0 ID=cds-WP_006249075.1;Parent=gene-JYJ20_RS03085;Dbxref=GenBank:WP_006249075.1;Name=WP_006249075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249075.1;locus_tag=JYJ20_RS03085;product=hypothetical protein;protein_id=WP_006249075.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 165537 167207 . + . ID=gene-JYJ20_RS03090;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=JYJ20_RS03090 NZ_JAFIRP010000005.1 Protein Homology CDS 165537 167207 . + 0 ID=cds-WP_040080642.1;Parent=gene-JYJ20_RS03090;Dbxref=GenBank:WP_040080642.1;Name=WP_040080642.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011608528.1;locus_tag=JYJ20_RS03090;product=energy-dependent translational throttle protein EttA;protein_id=WP_040080642.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 167295 168071 . + . ID=gene-JYJ20_RS03095;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=JYJ20_RS03095 NZ_JAFIRP010000005.1 Protein Homology CDS 167295 168071 . + 0 ID=cds-WP_006249073.1;Parent=gene-JYJ20_RS03095;Dbxref=GenBank:WP_006249073.1;Name=WP_006249073.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249073.1;locus_tag=JYJ20_RS03095;product=DNA polymerase III subunit epsilon;protein_id=WP_006249073.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 168135 168584 . - . ID=gene-JYJ20_RS03100;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=JYJ20_RS03100 NZ_JAFIRP010000005.1 Protein Homology CDS 168135 168584 . - 0 ID=cds-WP_006249072.1;Parent=gene-JYJ20_RS03100;Dbxref=GenBank:WP_006249072.1;Name=WP_006249072.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011609589.1;locus_tag=JYJ20_RS03100;product=50S ribosomal protein L9;protein_id=WP_006249072.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 168600 168827 . - . ID=gene-JYJ20_RS03105;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=JYJ20_RS03105 NZ_JAFIRP010000005.1 Protein Homology CDS 168600 168827 . - 0 ID=cds-WP_005598105.1;Parent=gene-JYJ20_RS03105;Dbxref=GenBank:WP_005598105.1;Name=WP_005598105.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005705387.1;locus_tag=JYJ20_RS03105;product=30S ribosomal protein S18;protein_id=WP_005598105.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 168802 169176 . - . ID=gene-JYJ20_RS03110;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=JYJ20_RS03110 NZ_JAFIRP010000005.1 Protein Homology CDS 168802 169176 . - 0 ID=cds-WP_006249071.1;Parent=gene-JYJ20_RS03110;Dbxref=GenBank:WP_006249071.1;Name=WP_006249071.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598106.1;locus_tag=JYJ20_RS03110;product=primosomal replication protein N;protein_id=WP_006249071.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 169151 169525 . - . ID=gene-JYJ20_RS03115;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=JYJ20_RS03115 NZ_JAFIRP010000005.1 Protein Homology CDS 169151 169525 . - 0 ID=cds-WP_005598107.1;Parent=gene-JYJ20_RS03115;Dbxref=GenBank:WP_005598107.1;Name=WP_005598107.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848538.1;locus_tag=JYJ20_RS03115;product=30S ribosomal protein S6;protein_id=WP_005598107.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 169759 171045 . + . ID=gene-JYJ20_RS03120;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=JYJ20_RS03120 NZ_JAFIRP010000005.1 Protein Homology CDS 169759 171045 . + 0 ID=cds-WP_006249069.1;Parent=gene-JYJ20_RS03120;Dbxref=GenBank:WP_006249069.1;Name=WP_006249069.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012771675.1;locus_tag=JYJ20_RS03120;product=phosphoribosylamine--glycine ligase;protein_id=WP_006249069.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 171079 171606 . + . ID=gene-JYJ20_RS12060;Name=JYJ20_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12060 NZ_JAFIRP010000005.1 GeneMarkS-2+ CDS 171079 171606 . + 0 ID=cds-WP_245155371.1;Parent=gene-JYJ20_RS12060;Dbxref=GenBank:WP_245155371.1;Name=WP_245155371.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS12060;product=hypothetical protein;protein_id=WP_245155371.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 171557 172225 . + . ID=gene-JYJ20_RS12065;Name=JYJ20_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12065 NZ_JAFIRP010000005.1 GeneMarkS-2+ CDS 171557 172225 . + 0 ID=cds-WP_245155372.1;Parent=gene-JYJ20_RS12065;Dbxref=GenBank:WP_245155372.1;Name=WP_245155372.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS12065;product=hypothetical protein;protein_id=WP_245155372.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 172701 174740 . + . ID=gene-JYJ20_RS03130;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=JYJ20_RS03130 NZ_JAFIRP010000005.1 Protein Homology CDS 172701 174740 . + 0 ID=cds-WP_006249066.1;Parent=gene-JYJ20_RS03130;Dbxref=GenBank:WP_006249066.1;Name=WP_006249066.1;Ontology_term=GO:0005975,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253202.1;locus_tag=JYJ20_RS03130;product=4-alpha-glucanotransferase;protein_id=WP_006249066.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 174808 175539 . - . ID=gene-JYJ20_RS03135;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=JYJ20_RS03135 NZ_JAFIRP010000005.1 Protein Homology CDS 174808 175539 . - 0 ID=cds-WP_006249065.1;Parent=gene-JYJ20_RS03135;Dbxref=GenBank:WP_006249065.1;Name=WP_006249065.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253203.1;locus_tag=JYJ20_RS03135;product=nicotinamide riboside transporter PnuC;protein_id=WP_006249065.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 175930 180081 . + . ID=gene-JYJ20_RS03140;Name=JYJ20_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03140 NZ_JAFIRP010000005.1 Protein Homology CDS 175930 180081 . + 0 ID=cds-WP_209025983.1;Parent=gene-JYJ20_RS03140;Dbxref=GenBank:WP_209025983.1;Name=WP_209025983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249064.1;locus_tag=JYJ20_RS03140;product=YadA-like family protein;protein_id=WP_209025983.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 180171 181943 . - . ID=gene-JYJ20_RS03145;Name=JYJ20_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03145 NZ_JAFIRP010000005.1 Protein Homology CDS 180171 181943 . - 0 ID=cds-WP_006249063.1;Parent=gene-JYJ20_RS03145;Dbxref=GenBank:WP_006249063.1;Name=WP_006249063.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249063.1;locus_tag=JYJ20_RS03145;product=SLC13 family permease;protein_id=WP_006249063.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 182009 183076 . - . ID=gene-JYJ20_RS03150;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=JYJ20_RS03150 NZ_JAFIRP010000005.1 Protein Homology CDS 182009 183076 . - 0 ID=cds-WP_006249062.1;Parent=gene-JYJ20_RS03150;Dbxref=GenBank:WP_006249062.1;Name=WP_006249062.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249062.1;locus_tag=JYJ20_RS03150;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_006249062.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 183222 183839 . - . ID=gene-JYJ20_RS03155;Name=JYJ20_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03155 NZ_JAFIRP010000005.1 Protein Homology CDS 183222 183839 . - 0 ID=cds-WP_006251892.1;Parent=gene-JYJ20_RS03155;Dbxref=GenBank:WP_006251892.1;Name=WP_006251892.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase activity|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014990994.1;locus_tag=JYJ20_RS03155;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_006251892.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 183981 185537 . + . ID=gene-JYJ20_RS03160;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=JYJ20_RS03160 NZ_JAFIRP010000005.1 Protein Homology CDS 183981 185537 . + 0 ID=cds-WP_061887182.1;Parent=gene-JYJ20_RS03160;Dbxref=GenBank:WP_061887182.1;Name=WP_061887182.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251891.1;locus_tag=JYJ20_RS03160;product=anthranilate synthase component I;protein_id=WP_061887182.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 185547 186137 . + . ID=gene-JYJ20_RS03165;Name=JYJ20_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03165 NZ_JAFIRP010000005.1 Protein Homology CDS 185547 186137 . + 0 ID=cds-WP_006251890.1;Parent=gene-JYJ20_RS03165;Dbxref=GenBank:WP_006251890.1;Name=WP_006251890.1;Ontology_term=GO:0000162,GO:0004049,GO:0046820;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA,aminodeoxychorismate synthase activity|0046820||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249059.1;locus_tag=JYJ20_RS03165;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_006251890.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 186130 186516 . + . ID=gene-JYJ20_RS03170;Name=JYJ20_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03170 NZ_JAFIRP010000005.1 Protein Homology CDS 186130 186516 . + 0 ID=cds-WP_006251889.1;Parent=gene-JYJ20_RS03170;Dbxref=GenBank:WP_006251889.1;Name=WP_006251889.1;Ontology_term=GO:0008152,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005543439.1;locus_tag=JYJ20_RS03170;product=tautomerase family protein;protein_id=WP_006251889.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 186534 187529 . + . ID=gene-JYJ20_RS03175;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=JYJ20_RS03175 NZ_JAFIRP010000005.1 Protein Homology CDS 186534 187529 . + 0 ID=cds-WP_006249057.1;Parent=gene-JYJ20_RS03175;Dbxref=GenBank:WP_006249057.1;Name=WP_006249057.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249057.1;locus_tag=JYJ20_RS03175;product=anthranilate phosphoribosyltransferase;protein_id=WP_006249057.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 187589 188344 . + . ID=gene-JYJ20_RS03180;Name=JYJ20_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03180 NZ_JAFIRP010000005.1 Protein Homology CDS 187589 188344 . + 0 ID=cds-WP_006249056.1;Parent=gene-JYJ20_RS03180;Dbxref=GenBank:WP_006249056.1;Name=WP_006249056.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251887.1;locus_tag=JYJ20_RS03180;product=class I SAM-dependent methyltransferase;protein_id=WP_006249056.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 188433 188509 . + . ID=gene-JYJ20_RS03185;Name=JYJ20_RS03185;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS03185 NZ_JAFIRP010000005.1 tRNAscan-SE tRNA 188433 188509 . + . ID=rna-JYJ20_RS03185;Parent=gene-JYJ20_RS03185;anticodon=(pos:188467..188469);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS03185;product=tRNA-Asp NZ_JAFIRP010000005.1 tRNAscan-SE exon 188433 188509 . + . ID=exon-JYJ20_RS03185-1;Parent=rna-JYJ20_RS03185;anticodon=(pos:188467..188469);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS03185;product=tRNA-Asp NZ_JAFIRP010000005.1 RefSeq gene 188613 188996 . - . ID=gene-JYJ20_RS03190;Name=JYJ20_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03190 NZ_JAFIRP010000005.1 Protein Homology CDS 188613 188996 . - 0 ID=cds-WP_209025984.1;Parent=gene-JYJ20_RS03190;Dbxref=GenBank:WP_209025984.1;Name=WP_209025984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249055.1;locus_tag=JYJ20_RS03190;product=SufE family protein;protein_id=WP_209025984.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 189108 189701 . + . ID=gene-JYJ20_RS03195;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=JYJ20_RS03195 NZ_JAFIRP010000005.1 Protein Homology CDS 189108 189701 . + 0 ID=cds-WP_006249054.1;Parent=gene-JYJ20_RS03195;Dbxref=GenBank:WP_006249054.1;Name=WP_006249054.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251885.1;locus_tag=JYJ20_RS03195;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_006249054.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 189701 190948 . + . ID=gene-JYJ20_RS03200;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=JYJ20_RS03200 NZ_JAFIRP010000005.1 Protein Homology CDS 189701 190948 . + 0 ID=cds-WP_006249053.1;Parent=gene-JYJ20_RS03200;Dbxref=GenBank:WP_006249053.1;Name=WP_006249053.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251884.1;locus_tag=JYJ20_RS03200;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_006249053.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 190987 191739 . + . ID=gene-JYJ20_RS03205;Name=JYJ20_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03205 NZ_JAFIRP010000005.1 Protein Homology CDS 190987 191739 . + 0 ID=cds-WP_006249052.1;Parent=gene-JYJ20_RS03205;Dbxref=GenBank:WP_006249052.1;Name=WP_006249052.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249052.1;locus_tag=JYJ20_RS03205;product=Fic family protein;protein_id=WP_006249052.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 191775 192104 . - . ID=gene-JYJ20_RS03210;Name=JYJ20_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03210 NZ_JAFIRP010000005.1 Protein Homology CDS 191775 192104 . - 0 ID=cds-WP_006253208.1;Parent=gene-JYJ20_RS03210;Dbxref=GenBank:WP_006253208.1;Name=WP_006253208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249051.1;locus_tag=JYJ20_RS03210;product=hypothetical protein;protein_id=WP_006253208.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 192108 192290 . - . ID=gene-JYJ20_RS03215;Name=JYJ20_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03215 NZ_JAFIRP010000005.1 Protein Homology CDS 192108 192290 . - 0 ID=cds-WP_006249050.1;Parent=gene-JYJ20_RS03215;Dbxref=GenBank:WP_006249050.1;Name=WP_006249050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249050.1;locus_tag=JYJ20_RS03215;product=hypothetical protein;protein_id=WP_006249050.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 192425 192829 . + . ID=gene-JYJ20_RS03220;Name=JYJ20_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03220 NZ_JAFIRP010000005.1 Protein Homology CDS 192425 192829 . + 0 ID=cds-WP_006249049.1;Parent=gene-JYJ20_RS03220;Dbxref=GenBank:WP_006249049.1;Name=WP_006249049.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251882.1;locus_tag=JYJ20_RS03220;product=helix-turn-helix domain-containing protein;protein_id=WP_006249049.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 192831 193832 . + . ID=gene-JYJ20_RS03225;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=JYJ20_RS03225 NZ_JAFIRP010000005.1 Protein Homology CDS 192831 193832 . + 0 ID=cds-WP_015484564.1;Parent=gene-JYJ20_RS03225;Dbxref=GenBank:WP_015484564.1;Name=WP_015484564.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=lipid-A 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484564.1;locus_tag=JYJ20_RS03225;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_015484564.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 193810 193971 . + . ID=gene-JYJ20_RS03230;Name=JYJ20_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03230 NZ_JAFIRP010000005.1 Protein Homology CDS 193810 193971 . + 0 ID=cds-WP_006249047.1;Parent=gene-JYJ20_RS03230;Dbxref=GenBank:WP_006249047.1;Name=WP_006249047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249047.1;locus_tag=JYJ20_RS03230;product=Trm112 family protein;protein_id=WP_006249047.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 194059 195075 . + . ID=gene-JYJ20_RS03235;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=JYJ20_RS03235 NZ_JAFIRP010000005.1 Protein Homology CDS 194059 195075 . + 0 ID=cds-WP_006249046.1;Parent=gene-JYJ20_RS03235;Dbxref=GenBank:WP_006249046.1;Name=WP_006249046.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598364.1;locus_tag=JYJ20_RS03235;product=UDP-glucose 4-epimerase GalE;protein_id=WP_006249046.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 195135 196295 . + . ID=gene-JYJ20_RS03240;Name=JYJ20_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03240 NZ_JAFIRP010000005.1 Protein Homology CDS 195135 196295 . + 0 ID=cds-WP_006249045.1;Parent=gene-JYJ20_RS03240;Dbxref=GenBank:WP_006249045.1;Name=WP_006249045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249045.1;locus_tag=JYJ20_RS03240;product=hypothetical protein;protein_id=WP_006249045.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 196344 197126 . - . ID=gene-JYJ20_RS03245;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=JYJ20_RS03245 NZ_JAFIRP010000005.1 Protein Homology CDS 196344 197126 . - 0 ID=cds-WP_006249044.1;Parent=gene-JYJ20_RS03245;Dbxref=GenBank:WP_006249044.1;Name=WP_006249044.1;Ontology_term=GO:0071265,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase [NAD(P)H] activity|0004489||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253214.1;locus_tag=JYJ20_RS03245;product=methylenetetrahydrofolate reductase;protein_id=WP_006249044.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 197174 199060 . + . ID=gene-JYJ20_RS03250;Name=JYJ20_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03250 NZ_JAFIRP010000005.1 Protein Homology CDS 197174 199060 . + 0 ID=cds-WP_006249043.1;Parent=gene-JYJ20_RS03250;Dbxref=GenBank:WP_006249043.1;Name=WP_006249043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249043.1;locus_tag=JYJ20_RS03250;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_006249043.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 199050 199373 . - . ID=gene-JYJ20_RS03255;Name=JYJ20_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03255 NZ_JAFIRP010000005.1 Protein Homology CDS 199050 199373 . - 0 ID=cds-WP_209025985.1;Parent=gene-JYJ20_RS03255;Dbxref=GenBank:WP_209025985.1;Name=WP_209025985.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249042.1;locus_tag=JYJ20_RS03255;product=addiction module antidote protein;protein_id=WP_209025985.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 199357 199692 . - . ID=gene-JYJ20_RS03260;Name=JYJ20_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03260 NZ_JAFIRP010000005.1 Protein Homology CDS 199357 199692 . - 0 ID=cds-WP_006253677.1;Parent=gene-JYJ20_RS03260;Dbxref=GenBank:WP_006253677.1;Name=WP_006253677.1;Ontology_term=GO:0008219,GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253677.1;locus_tag=JYJ20_RS03260;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_006253677.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 199873 200841 . + . ID=gene-JYJ20_RS03265;Name=JYJ20_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03265 NZ_JAFIRP010000005.1 Protein Homology CDS 199873 200841 . + 0 ID=cds-WP_006249330.1;Parent=gene-JYJ20_RS03265;Dbxref=GenBank:WP_006249330.1;Name=WP_006249330.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251876.1;locus_tag=JYJ20_RS03265;product=FecCD family ABC transporter permease;protein_id=WP_006249330.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 200838 201575 . + . ID=gene-JYJ20_RS03270;Name=JYJ20_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03270 NZ_JAFIRP010000005.1 Protein Homology CDS 200838 201575 . + 0 ID=cds-WP_209025986.1;Parent=gene-JYJ20_RS03270;Dbxref=GenBank:WP_209025986.1;Name=WP_209025986.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249329.1;locus_tag=JYJ20_RS03270;product=ABC transporter ATP-binding protein;protein_id=WP_209025986.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 201843 202478 . - . ID=gene-JYJ20_RS03275;Name=JYJ20_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03275 NZ_JAFIRP010000005.1 Protein Homology CDS 201843 202478 . - 0 ID=cds-WP_006253678.1;Parent=gene-JYJ20_RS03275;Dbxref=GenBank:WP_006253678.1;Name=WP_006253678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253678.1;locus_tag=JYJ20_RS03275;product=hypothetical protein;protein_id=WP_006253678.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 202481 204598 . - . ID=gene-JYJ20_RS12070;Name=JYJ20_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12070 NZ_JAFIRP010000005.1 Protein Homology CDS 202481 204598 . - 0 ID=cds-WP_020824382.1;Parent=gene-JYJ20_RS12070;Dbxref=GenBank:WP_020824382.1;Name=WP_020824382.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: protein motif:HMM:NF013579.7;locus_tag=JYJ20_RS12070;product=restriction endonuclease subunit S;protein_id=WP_020824382.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 204697 206700 . - . ID=gene-JYJ20_RS03290;Name=JYJ20_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03290 NZ_JAFIRP010000005.1 Protein Homology CDS 204697 206700 . - 0 ID=cds-WP_006250042.1;Parent=gene-JYJ20_RS03290;Dbxref=GenBank:WP_006250042.1;Name=WP_006250042.1;Ontology_term=GO:0009307,GO:0032259,GO:0003677,GO:0008168,GO:0009007,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA restriction-modification system|0009307||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250042.1;locus_tag=JYJ20_RS03290;product=type I restriction-modification system subunit M;protein_id=WP_006250042.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 206808 210524 . - . ID=gene-JYJ20_RS03295;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=JYJ20_RS03295 NZ_JAFIRP010000005.1 Protein Homology CDS 206808 210524 . - 0 ID=cds-WP_209025987.1;Parent=gene-JYJ20_RS03295;Dbxref=GenBank:WP_209025987.1;Name=WP_209025987.1;Ontology_term=GO:0071265,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=L-methionine biosynthetic process|0071265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251869.1;locus_tag=JYJ20_RS03295;product=methionine synthase;protein_id=WP_209025987.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 210690 211973 . + . ID=gene-JYJ20_RS03300;Name=JYJ20_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03300 NZ_JAFIRP010000005.1 Protein Homology CDS 210690 211973 . + 0 ID=cds-WP_006250039.1;Parent=gene-JYJ20_RS03300;Dbxref=GenBank:WP_006250039.1;Name=WP_006250039.1;Ontology_term=GO:0006810,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250039.1;locus_tag=JYJ20_RS03300;product=AmpG family muropeptide MFS transporter;protein_id=WP_006250039.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 212317 213360 . + . ID=gene-JYJ20_RS12075;Name=JYJ20_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12075 NZ_JAFIRP010000005.1 Protein Homology CDS 212317 213360 . + 0 ID=cds-WP_134916556.1;Parent=gene-JYJ20_RS12075;Dbxref=GenBank:WP_134916556.1;Name=WP_134916556.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484415.1;locus_tag=JYJ20_RS12075;product=ABC transporter ATP-binding protein;protein_id=WP_134916556.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 213388 213786 . + . ID=gene-JYJ20_RS03315;Name=JYJ20_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03315 NZ_JAFIRP010000005.1 Protein Homology CDS 213388 213786 . + 0 ID=cds-WP_006253680.1;Parent=gene-JYJ20_RS03315;Dbxref=GenBank:WP_006253680.1;Name=WP_006253680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253680.1;locus_tag=JYJ20_RS03315;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_006253680.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 213821 215524 . + . ID=gene-JYJ20_RS03320;Name=JYJ20_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03320 NZ_JAFIRP010000005.1 Protein Homology CDS 213821 215524 . + 0 ID=cds-WP_134916555.1;Parent=gene-JYJ20_RS03320;Dbxref=GenBank:WP_134916555.1;Name=WP_134916555.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012801.7;locus_tag=JYJ20_RS03320;product=TonB-dependent siderophore receptor;protein_id=WP_134916555.1;transl_table=11 NZ_JAFIRP010000005.1 RefSeq gene 215636 216280 . + . ID=gene-JYJ20_RS03325;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=JYJ20_RS03325 NZ_JAFIRP010000005.1 Protein Homology CDS 215636 216280 . + 0 ID=cds-WP_006250036.1;Parent=gene-JYJ20_RS03325;Dbxref=GenBank:WP_006250036.1;Name=WP_006250036.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=AMP kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005721186.1;locus_tag=JYJ20_RS03325;product=adenylate kinase;protein_id=WP_006250036.1;transl_table=11 ##sequence-region NZ_JAFIRP010000006.1 1 31412 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000006.1 RefSeq region 1 31412 . + . ID=NZ_JAFIRP010000006.1:1..31412;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000006.1 RefSeq gene 24 99 . - . ID=gene-JYJ20_RS03330;Name=JYJ20_RS03330;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS03330 NZ_JAFIRP010000006.1 tRNAscan-SE tRNA 24 99 . - . ID=rna-JYJ20_RS03330;Parent=gene-JYJ20_RS03330;anticodon=(pos:complement(64..66));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS03330;product=tRNA-Gly NZ_JAFIRP010000006.1 tRNAscan-SE exon 24 99 . - . ID=exon-JYJ20_RS03330-1;Parent=rna-JYJ20_RS03330;anticodon=(pos:complement(64..66));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS03330;product=tRNA-Gly NZ_JAFIRP010000006.1 RefSeq gene 266 1504 . - . ID=gene-JYJ20_RS03335;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=JYJ20_RS03335 NZ_JAFIRP010000006.1 Protein Homology CDS 266 1504 . - 0 ID=cds-WP_006251767.1;Parent=gene-JYJ20_RS03335;Dbxref=GenBank:WP_006251767.1;Name=WP_006251767.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251767.1;locus_tag=JYJ20_RS03335;product=peptidase T;protein_id=WP_006251767.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 1524 1913 . - . ID=gene-JYJ20_RS03340;Name=JYJ20_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03340 NZ_JAFIRP010000006.1 Protein Homology CDS 1524 1913 . - 0 ID=cds-WP_006249411.1;Parent=gene-JYJ20_RS03340;Dbxref=GenBank:WP_006249411.1;Name=WP_006249411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249411.1;locus_tag=JYJ20_RS03340;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_006249411.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 1914 2174 . - . ID=gene-JYJ20_RS03345;Name=JYJ20_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03345 NZ_JAFIRP010000006.1 Protein Homology CDS 1914 2174 . - 0 ID=cds-WP_006251766.1;Parent=gene-JYJ20_RS03345;Dbxref=GenBank:WP_006251766.1;Name=WP_006251766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251766.1;locus_tag=JYJ20_RS03345;product=antitoxin;protein_id=WP_006251766.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 2290 2502 . - . ID=gene-JYJ20_RS03350;Name=JYJ20_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03350 NZ_JAFIRP010000006.1 Protein Homology CDS 2290 2502 . - 0 ID=cds-WP_006251765.1;Parent=gene-JYJ20_RS03350;Dbxref=GenBank:WP_006251765.1;Name=WP_006251765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251765.1;locus_tag=JYJ20_RS03350;product=BrnA antitoxin family protein;protein_id=WP_006251765.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 2503 2790 . - . ID=gene-JYJ20_RS03355;Name=JYJ20_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03355 NZ_JAFIRP010000006.1 Protein Homology CDS 2503 2790 . - 0 ID=cds-WP_006251764.1;Parent=gene-JYJ20_RS03355;Dbxref=GenBank:WP_006251764.1;Name=WP_006251764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251764.1;locus_tag=JYJ20_RS03355;product=BrnT family toxin;protein_id=WP_006251764.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 2953 6486 . - . ID=gene-JYJ20_RS03360;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=JYJ20_RS03360 NZ_JAFIRP010000006.1 Protein Homology CDS 2953 6486 . - 0 ID=cds-WP_040081125.1;Parent=gene-JYJ20_RS03360;Dbxref=GenBank:WP_040081125.1;Name=WP_040081125.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251763.1;locus_tag=JYJ20_RS03360;product=transcription-repair coupling factor;protein_id=WP_040081125.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 6647 7864 . + . ID=gene-JYJ20_RS03365;Name=JYJ20_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03365 NZ_JAFIRP010000006.1 Protein Homology CDS 6647 7864 . + 0 ID=cds-WP_209025988.1;Parent=gene-JYJ20_RS03365;Dbxref=GenBank:WP_209025988.1;Name=WP_209025988.1;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650987.1;locus_tag=JYJ20_RS03365;product=aromatic amino acid transport family protein;protein_id=WP_209025988.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 7944 8450 . - . ID=gene-JYJ20_RS03370;Name=hutX;gbkey=Gene;gene=hutX;gene_biotype=protein_coding;locus_tag=JYJ20_RS03370 NZ_JAFIRP010000006.1 Protein Homology CDS 7944 8450 . - 0 ID=cds-WP_006249322.1;Parent=gene-JYJ20_RS03370;Dbxref=GenBank:WP_006249322.1;Name=WP_006249322.1;gbkey=CDS;gene=hutX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249322.1;locus_tag=JYJ20_RS03370;product=heme utilization cystosolic carrier protein HutX;protein_id=WP_006249322.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 8505 10532 . - . ID=gene-JYJ20_RS03375;Name=JYJ20_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03375 NZ_JAFIRP010000006.1 Protein Homology CDS 8505 10532 . - 0 ID=cds-WP_209025992.1;Parent=gene-JYJ20_RS03375;Dbxref=GenBank:WP_209025992.1;Name=WP_209025992.1;Ontology_term=GO:0055085,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:TIGR01786.1;locus_tag=JYJ20_RS03375;product=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;protein_id=WP_209025992.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 10550 10933 . - . ID=gene-JYJ20_RS03380;Name=JYJ20_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03380 NZ_JAFIRP010000006.1 Protein Homology CDS 10550 10933 . - 0 ID=cds-WP_006251760.1;Parent=gene-JYJ20_RS03380;Dbxref=GenBank:WP_006251760.1;Name=WP_006251760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251760.1;locus_tag=JYJ20_RS03380;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_006251760.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 11088 11606 . + . ID=gene-JYJ20_RS03385;Name=hutZ;gbkey=Gene;gene=hutZ;gene_biotype=protein_coding;locus_tag=JYJ20_RS03385 NZ_JAFIRP010000006.1 Protein Homology CDS 11088 11606 . + 0 ID=cds-WP_209025989.1;Parent=gene-JYJ20_RS03385;Dbxref=GenBank:WP_209025989.1;Name=WP_209025989.1;Ontology_term=GO:0042167,GO:0020037;gbkey=CDS;gene=hutZ;go_function=heme binding|0020037||IEA;go_process=heme catabolic process|0042167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251759.1;locus_tag=JYJ20_RS03385;product=heme utilization protein HutZ;protein_id=WP_209025989.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 11756 14368 . + . ID=gene-JYJ20_RS03390;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=JYJ20_RS03390 NZ_JAFIRP010000006.1 Protein Homology CDS 11756 14368 . + 0 ID=cds-WP_209025990.1;Parent=gene-JYJ20_RS03390;Dbxref=GenBank:WP_209025990.1;Name=WP_209025990.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251758.1;locus_tag=JYJ20_RS03390;product=aminopeptidase N;protein_id=WP_209025990.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 14428 14700 . - . ID=gene-JYJ20_RS03395;Name=JYJ20_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03395 NZ_JAFIRP010000006.1 Protein Homology CDS 14428 14700 . - 0 ID=cds-WP_006249326.1;Parent=gene-JYJ20_RS03395;Dbxref=GenBank:WP_006249326.1;Name=WP_006249326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249326.1;locus_tag=JYJ20_RS03395;product=acylphosphatase;protein_id=WP_006249326.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 14754 16388 . - . ID=gene-JYJ20_RS03400;Name=JYJ20_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03400 NZ_JAFIRP010000006.1 Protein Homology CDS 14754 16388 . - 0 ID=cds-WP_006253232.1;Parent=gene-JYJ20_RS03400;Dbxref=GenBank:WP_006253232.1;Name=WP_006253232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251757.1;locus_tag=JYJ20_RS03400;product=ABC transporter substrate-binding protein;protein_id=WP_006253232.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 16815 18233 . + . ID=gene-JYJ20_RS03405;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=JYJ20_RS03405 NZ_JAFIRP010000006.1 Protein Homology CDS 16815 18233 . + 0 ID=cds-WP_006249787.1;Parent=gene-JYJ20_RS03405;Dbxref=GenBank:WP_006249787.1;Name=WP_006249787.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249787.1;locus_tag=JYJ20_RS03405;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_006249787.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 18246 18848 . + . ID=gene-JYJ20_RS03410;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=JYJ20_RS03410 NZ_JAFIRP010000006.1 Protein Homology CDS 18246 18848 . + 0 ID=cds-WP_006249786.1;Parent=gene-JYJ20_RS03410;Dbxref=GenBank:WP_006249786.1;Name=WP_006249786.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595839.1;locus_tag=JYJ20_RS03410;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_006249786.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 18920 19384 . - . ID=gene-JYJ20_RS03415;Name=JYJ20_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03415 NZ_JAFIRP010000006.1 Protein Homology CDS 18920 19384 . - 0 ID=cds-WP_006249785.1;Parent=gene-JYJ20_RS03415;Dbxref=GenBank:WP_006249785.1;Name=WP_006249785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249785.1;locus_tag=JYJ20_RS03415;product=hypothetical protein;protein_id=WP_006249785.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 19408 19914 . - . ID=gene-JYJ20_RS03420;Name=JYJ20_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03420 NZ_JAFIRP010000006.1 Protein Homology CDS 19408 19914 . - 0 ID=cds-WP_006249784.1;Parent=gene-JYJ20_RS03420;Dbxref=GenBank:WP_006249784.1;Name=WP_006249784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595838.1;locus_tag=JYJ20_RS03420;product=DUF2301 domain-containing membrane protein;protein_id=WP_006249784.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 19937 20914 . - . ID=gene-JYJ20_RS03425;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=JYJ20_RS03425 NZ_JAFIRP010000006.1 Protein Homology CDS 19937 20914 . - 0 ID=cds-WP_006253626.1;Parent=gene-JYJ20_RS03425;Dbxref=GenBank:WP_006253626.1;Name=WP_006253626.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251754.1;locus_tag=JYJ20_RS03425;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_006253626.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 21265 22242 . + . ID=gene-JYJ20_RS03430;Name=JYJ20_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03430 NZ_JAFIRP010000006.1 Protein Homology CDS 21265 22242 . + 0 ID=cds-WP_006253235.1;Parent=gene-JYJ20_RS03430;Dbxref=GenBank:WP_006253235.1;Name=WP_006253235.1;Ontology_term=GO:0006260,GO:0009263,GO:0004748,GO:0046872,GO:0005971;gbkey=CDS;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,metal ion binding|0046872||IEA;go_process=DNA replication|0006260||IEA,deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251753.1;locus_tag=JYJ20_RS03430;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_006253235.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 22229 23896 . + . ID=gene-JYJ20_RS03435;Name=JYJ20_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03435 NZ_JAFIRP010000006.1 Protein Homology CDS 22229 23896 . + 0 ID=cds-WP_006249789.1;Parent=gene-JYJ20_RS03435;Dbxref=GenBank:WP_006249789.1;Name=WP_006249789.1;Ontology_term=GO:0004748;gbkey=CDS;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651197.1;locus_tag=JYJ20_RS03435;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_006249789.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 23900 24319 . + . ID=gene-JYJ20_RS03440;Name=JYJ20_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03440 NZ_JAFIRP010000006.1 Protein Homology CDS 23900 24319 . + 0 ID=cds-WP_006249790.1;Parent=gene-JYJ20_RS03440;Dbxref=GenBank:WP_006249790.1;Name=WP_006249790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249790.1;locus_tag=JYJ20_RS03440;product=hypothetical protein;protein_id=WP_006249790.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 24554 25315 . - . ID=gene-JYJ20_RS03445;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=JYJ20_RS03445 NZ_JAFIRP010000006.1 Protein Homology CDS 24554 25315 . - 0 ID=cds-WP_209025991.1;Parent=gene-JYJ20_RS03445;Dbxref=GenBank:WP_209025991.1;Name=WP_209025991.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249791.1;locus_tag=JYJ20_RS03445;product=NAD(+) diphosphatase;protein_id=WP_209025991.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 25308 25967 . - . ID=gene-JYJ20_RS03450;Name=JYJ20_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03450 NZ_JAFIRP010000006.1 Protein Homology CDS 25308 25967 . - 0 ID=cds-WP_162832621.1;Parent=gene-JYJ20_RS03450;Dbxref=GenBank:WP_162832621.1;Name=WP_162832621.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0016866;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,intramolecular transferase activity|0016866||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251752.1;locus_tag=JYJ20_RS03450;product=pseudouridine synthase;protein_id=WP_162832621.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 25988 26836 . - . ID=gene-JYJ20_RS03455;Name=JYJ20_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03455 NZ_JAFIRP010000006.1 Protein Homology CDS 25988 26836 . - 0 ID=cds-WP_006249793.1;Parent=gene-JYJ20_RS03455;Dbxref=GenBank:WP_006249793.1;Name=WP_006249793.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595732.1;locus_tag=JYJ20_RS03455;product=DMT family transporter;protein_id=WP_006249793.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 26836 27321 . - . ID=gene-JYJ20_RS03460;Name=JYJ20_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03460 NZ_JAFIRP010000006.1 Protein Homology CDS 26836 27321 . - 0 ID=cds-WP_061887114.1;Parent=gene-JYJ20_RS03460;Dbxref=GenBank:WP_061887114.1;Name=WP_061887114.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249794.1;locus_tag=JYJ20_RS03460;product=FxsA family protein;protein_id=WP_061887114.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 27323 28645 . - . ID=gene-JYJ20_RS03465;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=JYJ20_RS03465 NZ_JAFIRP010000006.1 Protein Homology CDS 27323 28645 . - 0 ID=cds-WP_006249795.1;Parent=gene-JYJ20_RS03465;Dbxref=GenBank:WP_006249795.1;Name=WP_006249795.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249795.1;locus_tag=JYJ20_RS03465;product=Xaa-Pro dipeptidase;protein_id=WP_006249795.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 28656 28898 . + . ID=gene-JYJ20_RS03470;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=JYJ20_RS03470 NZ_JAFIRP010000006.1 Protein Homology CDS 28656 28898 . + 0 ID=cds-WP_006249796.1;Parent=gene-JYJ20_RS03470;Dbxref=GenBank:WP_006249796.1;Name=WP_006249796.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249796.1;locus_tag=JYJ20_RS03470;product=sulfurtransferase TusA;protein_id=WP_006249796.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 28965 29396 . - . ID=gene-JYJ20_RS03475;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=JYJ20_RS03475 NZ_JAFIRP010000006.1 Protein Homology CDS 28965 29396 . - 0 ID=cds-WP_006249797.1;Parent=gene-JYJ20_RS03475;Dbxref=GenBank:WP_006249797.1;Name=WP_006249797.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005595739.1;locus_tag=JYJ20_RS03475;product=ribonuclease E inhibitor RraB;protein_id=WP_006249797.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 29411 30022 . - . ID=gene-JYJ20_RS03480;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=JYJ20_RS03480 NZ_JAFIRP010000006.1 Protein Homology CDS 29411 30022 . - 0 ID=cds-WP_006249798.1;Parent=gene-JYJ20_RS03480;Dbxref=GenBank:WP_006249798.1;Name=WP_006249798.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249798.1;locus_tag=JYJ20_RS03480;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_006249798.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 30024 30440 . - . ID=gene-JYJ20_RS03485;Name=JYJ20_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03485 NZ_JAFIRP010000006.1 Protein Homology CDS 30024 30440 . - 0 ID=cds-WP_006249799.1;Parent=gene-JYJ20_RS03485;Dbxref=GenBank:WP_006249799.1;Name=WP_006249799.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249799.1;locus_tag=JYJ20_RS03485;product=DUF805 domain-containing protein;protein_id=WP_006249799.1;transl_table=11 NZ_JAFIRP010000006.1 RefSeq gene 30444 31274 . - . ID=gene-JYJ20_RS03490;Name=JYJ20_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03490 NZ_JAFIRP010000006.1 Protein Homology CDS 30444 31274 . - 0 ID=cds-WP_006249800.1;Parent=gene-JYJ20_RS03490;Dbxref=GenBank:WP_006249800.1;Name=WP_006249800.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618704.1;locus_tag=JYJ20_RS03490;product=ZIP family metal transporter;protein_id=WP_006249800.1;transl_table=11 ##sequence-region NZ_JAFIRP010000007.1 1 215726 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000007.1 RefSeq region 1 215726 . + . ID=NZ_JAFIRP010000007.1:1..215726;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000007.1 RefSeq gene 163 1995 . + . ID=gene-JYJ20_RS03495;Name=JYJ20_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03495 NZ_JAFIRP010000007.1 Protein Homology CDS 163 1995 . + 0 ID=cds-WP_006250663.1;Parent=gene-JYJ20_RS03495;Dbxref=GenBank:WP_006250663.1;Name=WP_006250663.1;Ontology_term=GO:0006306,GO:0009307,GO:0003677,GO:0008168,GO:0008170,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,N-methyltransferase activity|0008170||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=obsolete DNA methylation|0006306||IEA,DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250663.1;locus_tag=JYJ20_RS03495;product=site-specific DNA-methyltransferase;protein_id=WP_006250663.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 2005 4641 . + . ID=gene-JYJ20_RS03500;Name=JYJ20_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03500 NZ_JAFIRP010000007.1 Protein Homology CDS 2005 4641 . + 0 ID=cds-WP_006248098.1;Parent=gene-JYJ20_RS03500;Dbxref=GenBank:WP_006248098.1;Name=WP_006248098.1;Ontology_term=GO:0015668;gbkey=CDS;go_function=type III site-specific deoxyribonuclease activity|0015668||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250664.1;locus_tag=JYJ20_RS03500;product=restriction endonuclease;protein_id=WP_006248098.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 4773 7205 . + . ID=gene-JYJ20_RS03505;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=JYJ20_RS03505 NZ_JAFIRP010000007.1 Protein Homology CDS 4773 7205 . + 0 ID=cds-WP_006248099.1;Parent=gene-JYJ20_RS03505;Dbxref=GenBank:WP_006248099.1;Name=WP_006248099.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651898.1;locus_tag=JYJ20_RS03505;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_006248099.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 7258 8220 . - . ID=gene-JYJ20_RS03510;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=JYJ20_RS03510 NZ_JAFIRP010000007.1 Protein Homology CDS 7258 8220 . - 0 ID=cds-WP_209025993.1;Parent=gene-JYJ20_RS03510;Dbxref=GenBank:WP_209025993.1;Name=WP_209025993.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005707797.1;locus_tag=JYJ20_RS03510;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_209025993.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 8317 10080 . - . ID=gene-JYJ20_RS03515;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=JYJ20_RS03515 NZ_JAFIRP010000007.1 Protein Homology CDS 8317 10080 . - 0 ID=cds-WP_006253504.1;Parent=gene-JYJ20_RS03515;Dbxref=GenBank:WP_006253504.1;Name=WP_006253504.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253504.1;locus_tag=JYJ20_RS03515;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_006253504.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 10344 12632 . + . ID=gene-JYJ20_RS03520;Name=cas3;gbkey=Gene;gene=cas3;gene_biotype=protein_coding;locus_tag=JYJ20_RS03520 NZ_JAFIRP010000007.1 Protein Homology CDS 10344 12632 . + 0 ID=cds-WP_209025994.1;Parent=gene-JYJ20_RS03520;Dbxref=GenBank:WP_209025994.1;Name=WP_209025994.1;Ontology_term=GO:0043571,GO:0004386;gbkey=CDS;gene=cas3;go_function=helicase activity|0004386||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248102.1;locus_tag=JYJ20_RS03520;product=CRISPR-associated helicase Cas3';protein_id=WP_209025994.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 12763 13818 . + . ID=gene-JYJ20_RS03525;Name=JYJ20_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03525 NZ_JAFIRP010000007.1 Protein Homology CDS 12763 13818 . + 0 ID=cds-WP_020824140.1;Parent=gene-JYJ20_RS03525;Dbxref=GenBank:WP_020824140.1;Name=WP_020824140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250668.1;locus_tag=JYJ20_RS03525;product=SIR2 family protein;protein_id=WP_020824140.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 13808 15559 . + . ID=gene-JYJ20_RS03530;Name=JYJ20_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03530 NZ_JAFIRP010000007.1 Protein Homology CDS 13808 15559 . + 0 ID=cds-WP_006250669.1;Parent=gene-JYJ20_RS03530;Dbxref=GenBank:WP_006250669.1;Name=WP_006250669.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250669.1;locus_tag=JYJ20_RS03530;product=ATP-binding protein;protein_id=WP_006250669.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 15796 16473 . + . ID=gene-JYJ20_RS03535;Name=cas5c;gbkey=Gene;gene=cas5c;gene_biotype=protein_coding;locus_tag=JYJ20_RS03535 NZ_JAFIRP010000007.1 Protein Homology CDS 15796 16473 . + 0 ID=cds-WP_006248107.1;Parent=gene-JYJ20_RS03535;Dbxref=GenBank:WP_006248107.1;Name=WP_006248107.1;Ontology_term=GO:0043571,GO:0051607,GO:0004519;gbkey=CDS;gene=cas5c;go_function=endonuclease activity|0004519||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252734.1;locus_tag=JYJ20_RS03535;product=type I-C CRISPR-associated protein Cas5c;protein_id=WP_006248107.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 16470 18254 . + . ID=gene-JYJ20_RS03540;Name=cas8c;gbkey=Gene;gene=cas8c;gene_biotype=protein_coding;locus_tag=JYJ20_RS03540 NZ_JAFIRP010000007.1 Protein Homology CDS 16470 18254 . + 0 ID=cds-WP_209025995.1;Parent=gene-JYJ20_RS03540;Dbxref=GenBank:WP_209025995.1;Name=WP_209025995.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas8c;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448701.1;locus_tag=JYJ20_RS03540;product=type I-C CRISPR-associated protein Cas8c/Csd1;protein_id=WP_209025995.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 18264 19127 . + . ID=gene-JYJ20_RS03545;Name=cas7c;gbkey=Gene;gene=cas7c;gene_biotype=protein_coding;locus_tag=JYJ20_RS03545 NZ_JAFIRP010000007.1 Protein Homology CDS 18264 19127 . + 0 ID=cds-WP_006248109.1;Parent=gene-JYJ20_RS03545;Dbxref=GenBank:WP_006248109.1;Name=WP_006248109.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas7c;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004284050.1;locus_tag=JYJ20_RS03545;product=type I-C CRISPR-associated protein Cas7/Csd2;protein_id=WP_006248109.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 19127 19801 . + . ID=gene-JYJ20_RS03550;Name=cas4;gbkey=Gene;gene=cas4;gene_biotype=protein_coding;locus_tag=JYJ20_RS03550 NZ_JAFIRP010000007.1 Protein Homology CDS 19127 19801 . + 0 ID=cds-WP_006253509.1;Parent=gene-JYJ20_RS03550;Dbxref=GenBank:WP_006253509.1;Name=WP_006253509.1;Ontology_term=GO:0043571;gbkey=CDS;gene=cas4;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248110.1;locus_tag=JYJ20_RS03550;product=CRISPR-associated protein Cas4;protein_id=WP_006253509.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 19828 20748 . + . ID=gene-JYJ20_RS03555;Name=JYJ20_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03555 NZ_JAFIRP010000007.1 Protein Homology CDS 19828 20748 . + 0 ID=cds-WP_006248111.1;Parent=gene-JYJ20_RS03555;Dbxref=GenBank:WP_006248111.1;Name=WP_006248111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248111.1;locus_tag=JYJ20_RS03555;product=DUF3800 domain-containing protein;protein_id=WP_006248111.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 21145 22158 . + . ID=gene-JYJ20_RS03560;Name=cas1c;gbkey=Gene;gene=cas1c;gene_biotype=protein_coding;locus_tag=JYJ20_RS03560 NZ_JAFIRP010000007.1 Protein Homology CDS 21145 22158 . + 0 ID=cds-WP_126301921.1;Parent=gene-JYJ20_RS03560;Dbxref=GenBank:WP_126301921.1;Name=WP_126301921.1;Ontology_term=GO:0043571,GO:0051607,GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;gene=cas1c;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003762781.1;locus_tag=JYJ20_RS03560;product=type I-C CRISPR-associated endonuclease Cas1c;protein_id=WP_126301921.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 22225 22518 . + . ID=gene-JYJ20_RS03565;Name=cas2;gbkey=Gene;gene=cas2;gene_biotype=protein_coding;locus_tag=JYJ20_RS03565 NZ_JAFIRP010000007.1 Protein Homology CDS 22225 22518 . + 0 ID=cds-WP_006248114.1;Parent=gene-JYJ20_RS03565;Dbxref=GenBank:WP_006248114.1;Name=WP_006248114.1;Ontology_term=GO:0043571,GO:0004521;gbkey=CDS;gene=cas2;go_function=RNA endonuclease activity|0004521||IEA;go_process=maintenance of CRISPR repeat elements|0043571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005540845.1;locus_tag=JYJ20_RS03565;product=CRISPR-associated endonuclease Cas2;protein_id=WP_006248114.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq direct_repeat 22709 25068 . + . ID=id-NZ_JAFIRP010000007.1:22709..25068;gbkey=repeat_region;inference=COORDINATES: alignment:CRISPRCasFinder:4.3.2;rpt_family=CRISPR;rpt_type=direct;rpt_unit_range=22709..22740;rpt_unit_seq=gcagccacctacgcgtggctgtgaattgaaac NZ_JAFIRP010000007.1 RefSeq gene 25318 26793 . + . ID=gene-JYJ20_RS03570;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=JYJ20_RS03570 NZ_JAFIRP010000007.1 Protein Homology CDS 25318 26793 . + 0 ID=cds-WP_006248118.1;Parent=gene-JYJ20_RS03570;Dbxref=GenBank:WP_006248118.1;Name=WP_006248118.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005610087.1;locus_tag=JYJ20_RS03570;product=ribonuclease G;protein_id=WP_006248118.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 26947 28449 . + . ID=gene-JYJ20_RS03575;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=JYJ20_RS03575 NZ_JAFIRP010000007.1 Protein Homology CDS 26947 28449 . + 0 ID=cds-WP_006250676.1;Parent=gene-JYJ20_RS03575;Dbxref=GenBank:WP_006250676.1;Name=WP_006250676.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012054447.1;locus_tag=JYJ20_RS03575;product=lysine--tRNA ligase;protein_id=WP_006250676.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 28527 29600 . - . ID=gene-JYJ20_RS03580;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=JYJ20_RS03580 NZ_JAFIRP010000007.1 Protein Homology CDS 28527 29600 . - 0 ID=cds-WP_006248812.1;Parent=gene-JYJ20_RS03580;Dbxref=GenBank:WP_006248812.1;Name=WP_006248812.1;Ontology_term=GO:0009058,GO:0016747;gbkey=CDS;gene=metX;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248812.1;locus_tag=JYJ20_RS03580;product=homoserine O-acetyltransferase MetX;protein_id=WP_006248812.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 29868 30551 . + . ID=gene-JYJ20_RS03585;Name=JYJ20_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03585 NZ_JAFIRP010000007.1 Protein Homology CDS 29868 30551 . + 0 ID=cds-WP_006248814.1;Parent=gene-JYJ20_RS03585;Dbxref=GenBank:WP_006248814.1;Name=WP_006248814.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250677.1;locus_tag=JYJ20_RS03585;product=SanA/YdcF family protein;protein_id=WP_006248814.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 30588 31427 . - . ID=gene-JYJ20_RS03590;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=JYJ20_RS03590 NZ_JAFIRP010000007.1 Protein Homology CDS 30588 31427 . - 0 ID=cds-WP_006248815.1;Parent=gene-JYJ20_RS03590;Dbxref=GenBank:WP_006248815.1;Name=WP_006248815.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253511.1;locus_tag=JYJ20_RS03590;product=formyltetrahydrofolate deformylase;protein_id=WP_006248815.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 31497 31898 . - . ID=gene-JYJ20_RS03595;Name=JYJ20_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03595 NZ_JAFIRP010000007.1 Protein Homology CDS 31497 31898 . - 0 ID=cds-WP_006248816.1;Parent=gene-JYJ20_RS03595;Dbxref=GenBank:WP_006248816.1;Name=WP_006248816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248816.1;locus_tag=JYJ20_RS03595;product=H-NS family histone-like protein;protein_id=WP_006248816.1;transl_table=11 NZ_JAFIRP010000007.1 cmsearch riboswitch 32044 32213 . + . ID=id-NZ_JAFIRP010000007.1:32044..32213;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAFIRP010000007.1 RefSeq gene 32335 33867 . + . ID=gene-JYJ20_RS03600;Name=JYJ20_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03600 NZ_JAFIRP010000007.1 Protein Homology CDS 32335 33867 . + 0 ID=cds-WP_044427239.1;Parent=gene-JYJ20_RS03600;Dbxref=GenBank:WP_044427239.1;Name=WP_044427239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253512.1;locus_tag=JYJ20_RS03600;product=Na+/H+ antiporter NhaC family protein;protein_id=WP_044427239.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 34093 34845 . + . ID=gene-JYJ20_RS03605;Name=JYJ20_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03605 NZ_JAFIRP010000007.1 Protein Homology CDS 34093 34845 . + 0 ID=cds-WP_006248819.1;Parent=gene-JYJ20_RS03605;Dbxref=GenBank:WP_006248819.1;Name=WP_006248819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250680.1;locus_tag=JYJ20_RS03605;product=SDR family oxidoreductase;protein_id=WP_006248819.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 34857 36047 . + . ID=gene-JYJ20_RS03610;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=JYJ20_RS03610 NZ_JAFIRP010000007.1 Protein Homology CDS 34857 36047 . + 0 ID=cds-WP_006248820.1;Parent=gene-JYJ20_RS03610;Dbxref=GenBank:WP_006248820.1;Name=WP_006248820.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248820.1;locus_tag=JYJ20_RS03610;product=tryptophan synthase subunit beta;protein_id=WP_006248820.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 36049 36855 . + . ID=gene-JYJ20_RS03615;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=JYJ20_RS03615 NZ_JAFIRP010000007.1 Protein Homology CDS 36049 36855 . + 0 ID=cds-WP_006248821.1;Parent=gene-JYJ20_RS03615;Dbxref=GenBank:WP_006248821.1;Name=WP_006248821.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248821.1;locus_tag=JYJ20_RS03615;product=tryptophan synthase subunit alpha;protein_id=WP_006248821.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 36905 38311 . + . ID=gene-JYJ20_RS03620;Name=JYJ20_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03620 NZ_JAFIRP010000007.1 Protein Homology CDS 36905 38311 . + 0 ID=cds-WP_134916698.1;Parent=gene-JYJ20_RS03620;Dbxref=GenBank:WP_134916698.1;Name=WP_134916698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250683.1;locus_tag=JYJ20_RS03620;product=YdgA family protein;protein_id=WP_134916698.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 38434 41292 . + . ID=gene-JYJ20_RS03625;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=JYJ20_RS03625 NZ_JAFIRP010000007.1 Protein Homology CDS 38434 41292 . + 0 ID=cds-WP_006247813.1;Parent=gene-JYJ20_RS03625;Dbxref=GenBank:WP_006247813.1;Name=WP_006247813.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005611716.1;locus_tag=JYJ20_RS03625;product=DNA polymerase I;protein_id=WP_006247813.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 41403 42044 . + . ID=gene-JYJ20_RS03630;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=JYJ20_RS03630 NZ_JAFIRP010000007.1 Protein Homology CDS 41403 42044 . + 0 ID=cds-WP_006250685.1;Parent=gene-JYJ20_RS03630;Dbxref=GenBank:WP_006250685.1;Name=WP_006250685.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600572.1;locus_tag=JYJ20_RS03630;product=outer membrane lipoprotein periplasmic chaperone LolA;protein_id=WP_006250685.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 42124 42444 . + . ID=gene-JYJ20_RS03635;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=JYJ20_RS03635 NZ_JAFIRP010000007.1 Protein Homology CDS 42124 42444 . + 0 ID=cds-WP_006247815.1;Parent=gene-JYJ20_RS03635;Dbxref=GenBank:WP_006247815.1;Name=WP_006247815.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247815.1;locus_tag=JYJ20_RS03635;product=trp operon repressor;protein_id=WP_006247815.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 42431 43204 . + . ID=gene-JYJ20_RS03640;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=JYJ20_RS03640 NZ_JAFIRP010000007.1 Protein Homology CDS 42431 43204 . + 0 ID=cds-WP_006247816.1;Parent=gene-JYJ20_RS03640;Dbxref=GenBank:WP_006247816.1;Name=WP_006247816.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006247816.1;locus_tag=JYJ20_RS03640;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_006247816.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 43216 43935 . + . ID=gene-JYJ20_RS03645;Name=nfsA;gbkey=Gene;gene=nfsA;gene_biotype=protein_coding;locus_tag=JYJ20_RS03645 NZ_JAFIRP010000007.1 Protein Homology CDS 43216 43935 . + 0 ID=cds-WP_006247817.1;Parent=gene-JYJ20_RS03645;Dbxref=GenBank:WP_006247817.1;Name=WP_006247817.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250688.1;locus_tag=JYJ20_RS03645;product=oxygen-insensitive NADPH nitroreductase;protein_id=WP_006247817.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 43932 44843 . + . ID=gene-JYJ20_RS03650;Name=JYJ20_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03650 NZ_JAFIRP010000007.1 Protein Homology CDS 43932 44843 . + 0 ID=cds-WP_044427231.1;Parent=gene-JYJ20_RS03650;Dbxref=GenBank:WP_044427231.1;Name=WP_044427231.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250689.1;locus_tag=JYJ20_RS03650;product=ATP-grasp domain-containing protein;protein_id=WP_044427231.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 45000 46268 . + . ID=gene-JYJ20_RS03655;Name=JYJ20_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03655 NZ_JAFIRP010000007.1 Protein Homology CDS 45000 46268 . + 0 ID=cds-WP_209025996.1;Parent=gene-JYJ20_RS03655;Dbxref=GenBank:WP_209025996.1;Name=WP_209025996.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600593.1;locus_tag=JYJ20_RS03655;product=malic enzyme-like NAD(P)-binding protein;protein_id=WP_209025996.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 46420 46707 . + . ID=gene-JYJ20_RS03660;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=JYJ20_RS03660 NZ_JAFIRP010000007.1 Protein Homology CDS 46420 46707 . + 0 ID=cds-WP_006247821.1;Parent=gene-JYJ20_RS03660;Dbxref=GenBank:WP_006247821.1;Name=WP_006247821.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005625668.1;locus_tag=JYJ20_RS03660;product=50S ribosomal protein L25;protein_id=WP_006247821.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 46836 47214 . + . ID=gene-JYJ20_RS03665;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=JYJ20_RS03665 NZ_JAFIRP010000007.1 cmsearch RNase_P_RNA 46836 47214 . + . ID=rna-JYJ20_RS03665;Parent=gene-JYJ20_RS03665;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=JYJ20_RS03665;product=RNase P RNA component class A NZ_JAFIRP010000007.1 cmsearch exon 46836 47214 . + . ID=exon-JYJ20_RS03665-1;Parent=rna-JYJ20_RS03665;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=JYJ20_RS03665;product=RNase P RNA component class A NZ_JAFIRP010000007.1 RefSeq gene 47275 47913 . + . ID=gene-JYJ20_RS03670;Name=JYJ20_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03670 NZ_JAFIRP010000007.1 Protein Homology CDS 47275 47913 . + 0 ID=cds-WP_044427224.1;Parent=gene-JYJ20_RS03670;Dbxref=GenBank:WP_044427224.1;Name=WP_044427224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249169.1;locus_tag=JYJ20_RS03670;product=DUF1007 family protein;protein_id=WP_044427224.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 47904 48890 . + . ID=gene-JYJ20_RS03675;Name=JYJ20_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03675 NZ_JAFIRP010000007.1 Protein Homology CDS 47904 48890 . + 0 ID=cds-WP_006249168.1;Parent=gene-JYJ20_RS03675;Dbxref=GenBank:WP_006249168.1;Name=WP_006249168.1;Ontology_term=GO:0035444,GO:0015099,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nickel cation transmembrane transporter activity|0015099||IEA;go_process=nickel cation transmembrane transport|0035444||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252847.1;locus_tag=JYJ20_RS03675;product=nickel/cobalt transporter;protein_id=WP_006249168.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 48995 50440 . + . ID=gene-JYJ20_RS03680;Name=JYJ20_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03680 NZ_JAFIRP010000007.1 Protein Homology CDS 48995 50440 . + 0 ID=cds-WP_006249167.1;Parent=gene-JYJ20_RS03680;Dbxref=GenBank:WP_006249167.1;Name=WP_006249167.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249167.1;locus_tag=JYJ20_RS03680;product=alanine/glycine:cation symporter family protein;protein_id=WP_006249167.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 50511 51380 . - . ID=gene-JYJ20_RS03685;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=JYJ20_RS03685 NZ_JAFIRP010000007.1 Protein Homology CDS 50511 51380 . - 0 ID=cds-WP_006249166.1;Parent=gene-JYJ20_RS03685;Dbxref=GenBank:WP_006249166.1;Name=WP_006249166.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249166.1;locus_tag=JYJ20_RS03685;product=succinate--CoA ligase subunit alpha;protein_id=WP_006249166.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 51389 52549 . - . ID=gene-JYJ20_RS03690;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=JYJ20_RS03690 NZ_JAFIRP010000007.1 Protein Homology CDS 51389 52549 . - 0 ID=cds-WP_006249165.1;Parent=gene-JYJ20_RS03690;Dbxref=GenBank:WP_006249165.1;Name=WP_006249165.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249165.1;locus_tag=JYJ20_RS03690;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_006249165.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 52842 54071 . - . ID=gene-JYJ20_RS03695;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=JYJ20_RS03695 NZ_JAFIRP010000007.1 Protein Homology CDS 52842 54071 . - 0 ID=cds-WP_006249164.1;Parent=gene-JYJ20_RS03695;Dbxref=GenBank:WP_006249164.1;Name=WP_006249164.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005654196.1;locus_tag=JYJ20_RS03695;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_006249164.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 54174 56987 . - . ID=gene-JYJ20_RS03700;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=JYJ20_RS03700 NZ_JAFIRP010000007.1 Protein Homology CDS 54174 56987 . - 0 ID=cds-WP_209025997.1;Parent=gene-JYJ20_RS03700;Dbxref=GenBank:WP_209025997.1;Name=WP_209025997.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250754.1;locus_tag=JYJ20_RS03700;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_209025997.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 57152 57976 . - . ID=gene-JYJ20_RS03705;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=JYJ20_RS03705 NZ_JAFIRP010000007.1 Protein Homology CDS 57152 57976 . - 0 ID=cds-WP_006249162.1;Parent=gene-JYJ20_RS03705;Dbxref=GenBank:WP_006249162.1;Name=WP_006249162.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249162.1;locus_tag=JYJ20_RS03705;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_006249162.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 58123 59652 . + . ID=gene-JYJ20_RS03710;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=JYJ20_RS03710 NZ_JAFIRP010000007.1 Protein Homology CDS 58123 59652 . + 0 ID=cds-WP_006249161.1;Parent=gene-JYJ20_RS03710;Dbxref=GenBank:WP_006249161.1;Name=WP_006249161.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250755.1;locus_tag=JYJ20_RS03710;product=murein DD-endopeptidase MepM;protein_id=WP_006249161.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 59662 60345 . + . ID=gene-JYJ20_RS03715;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=JYJ20_RS03715 NZ_JAFIRP010000007.1 Protein Homology CDS 59662 60345 . + 0 ID=cds-WP_006249160.1;Parent=gene-JYJ20_RS03715;Dbxref=GenBank:WP_006249160.1;Name=WP_006249160.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596579.1;locus_tag=JYJ20_RS03715;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_006249160.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 60430 62151 . + . ID=gene-JYJ20_RS03720;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=JYJ20_RS03720 NZ_JAFIRP010000007.1 Protein Homology CDS 60430 62151 . + 0 ID=cds-WP_006249159.1;Parent=gene-JYJ20_RS03720;Dbxref=GenBank:WP_006249159.1;Name=WP_006249159.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250756.1;locus_tag=JYJ20_RS03720;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_006249159.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 62279 63127 . + . ID=gene-JYJ20_RS03725;Name=JYJ20_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03725 NZ_JAFIRP010000007.1 Protein Homology CDS 62279 63127 . + 0 ID=cds-WP_041447917.1;Parent=gene-JYJ20_RS03725;Dbxref=GenBank:WP_041447917.1;Name=WP_041447917.1;Ontology_term=GO:0015288,GO:0042834;gbkey=CDS;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005819477.1;locus_tag=JYJ20_RS03725;product=OmpA family protein;protein_id=WP_041447917.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 63215 64033 . + . ID=gene-JYJ20_RS03730;Name=JYJ20_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03730 NZ_JAFIRP010000007.1 Protein Homology CDS 63215 64033 . + 0 ID=cds-WP_006249157.1;Parent=gene-JYJ20_RS03730;Dbxref=GenBank:WP_006249157.1;Name=WP_006249157.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596585.1;locus_tag=JYJ20_RS03730;product=pyridoxal phosphatase;protein_id=WP_006249157.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 64036 65727 . + . ID=gene-JYJ20_RS03735;Name=narQ;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=JYJ20_RS03735 NZ_JAFIRP010000007.1 Protein Homology CDS 64036 65727 . + 0 ID=cds-WP_015587056.1;Parent=gene-JYJ20_RS03735;Dbxref=GenBank:WP_015587056.1;Name=WP_015587056.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narQ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015587056.1;locus_tag=JYJ20_RS03735;product=nitrate/nitrite two-component system sensor histidine kinase NarQ;protein_id=WP_015587056.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 65778 66296 . + . ID=gene-JYJ20_RS03740;Name=JYJ20_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03740 NZ_JAFIRP010000007.1 Protein Homology CDS 65778 66296 . + 0 ID=cds-WP_006249155.1;Parent=gene-JYJ20_RS03740;Dbxref=GenBank:WP_006249155.1;Name=WP_006249155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652289.1;locus_tag=JYJ20_RS03740;product=GNAT family N-acetyltransferase;protein_id=WP_006249155.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 66339 66938 . + . ID=gene-JYJ20_RS03745;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=JYJ20_RS03745 NZ_JAFIRP010000007.1 Protein Homology CDS 66339 66938 . + 0 ID=cds-WP_006249154.1;Parent=gene-JYJ20_RS03745;Dbxref=GenBank:WP_006249154.1;Name=WP_006249154.1;Ontology_term=GO:0006281,GO:0035870,GO:0036222;gbkey=CDS;gene=rdgB;go_function=dITP diphosphatase activity|0035870||IEA,XTP diphosphatase activity|0036222||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250760.1;locus_tag=JYJ20_RS03745;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_006249154.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 66935 67255 . + . ID=gene-JYJ20_RS03750;Name=JYJ20_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03750 NZ_JAFIRP010000007.1 Protein Homology CDS 66935 67255 . + 0 ID=cds-WP_006249153.1;Parent=gene-JYJ20_RS03750;Dbxref=GenBank:WP_006249153.1;Name=WP_006249153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005600559.1;locus_tag=JYJ20_RS03750;product=YbjQ family protein;protein_id=WP_006249153.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 67259 67711 . + . ID=gene-JYJ20_RS03755;Name=JYJ20_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03755 NZ_JAFIRP010000007.1 Protein Homology CDS 67259 67711 . + 0 ID=cds-WP_006249152.1;Parent=gene-JYJ20_RS03755;Dbxref=GenBank:WP_006249152.1;Name=WP_006249152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249152.1;locus_tag=JYJ20_RS03755;product=YcgN family cysteine cluster protein;protein_id=WP_006249152.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 67752 68333 . - . ID=gene-JYJ20_RS03760;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=JYJ20_RS03760 NZ_JAFIRP010000007.1 Protein Homology CDS 67752 68333 . - 0 ID=cds-WP_006249151.1;Parent=gene-JYJ20_RS03760;Dbxref=GenBank:WP_006249151.1;Name=WP_006249151.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249151.1;locus_tag=JYJ20_RS03760;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_006249151.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 68642 69601 . + . ID=gene-JYJ20_RS03765;Name=JYJ20_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03765 NZ_JAFIRP010000007.1 Protein Homology CDS 68642 69601 . + 0 ID=cds-WP_006248209.1;Parent=gene-JYJ20_RS03765;Dbxref=GenBank:WP_006248209.1;Name=WP_006248209.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248209.1;locus_tag=JYJ20_RS03765;product=sigma 54-interacting transcriptional regulator;protein_id=WP_006248209.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 69594 71345 . + . ID=gene-JYJ20_RS03770;Name=JYJ20_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03770 NZ_JAFIRP010000007.1 Protein Homology CDS 69594 71345 . + 0 ID=cds-WP_006253548.1;Parent=gene-JYJ20_RS03770;Dbxref=GenBank:WP_006253548.1;Name=WP_006253548.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252843.1;locus_tag=JYJ20_RS03770;product=ABC transporter substrate-binding protein;protein_id=WP_006253548.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 71348 72313 . + . ID=gene-JYJ20_RS03775;Name=JYJ20_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03775 NZ_JAFIRP010000007.1 Protein Homology CDS 71348 72313 . + 0 ID=cds-WP_006248207.1;Parent=gene-JYJ20_RS03775;Dbxref=GenBank:WP_006248207.1;Name=WP_006248207.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248207.1;locus_tag=JYJ20_RS03775;product=ABC transporter permease;protein_id=WP_006248207.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 72300 73193 . + . ID=gene-JYJ20_RS03780;Name=JYJ20_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03780 NZ_JAFIRP010000007.1 Protein Homology CDS 72300 73193 . + 0 ID=cds-WP_006248206.1;Parent=gene-JYJ20_RS03780;Dbxref=GenBank:WP_006248206.1;Name=WP_006248206.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248206.1;locus_tag=JYJ20_RS03780;product=ABC transporter permease subunit;protein_id=WP_006248206.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 73264 74316 . + . ID=gene-JYJ20_RS03785;Name=JYJ20_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03785 NZ_JAFIRP010000007.1 Protein Homology CDS 73264 74316 . + 0 ID=cds-WP_021279297.1;Parent=gene-JYJ20_RS03785;Dbxref=GenBank:WP_021279297.1;Name=WP_021279297.1;Ontology_term=GO:0015833,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248205.1;locus_tag=JYJ20_RS03785;product=peptide ABC transporter ATP-binding protein;protein_id=WP_021279297.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 74325 74555 . - . ID=gene-JYJ20_RS03790;Name=JYJ20_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03790 NZ_JAFIRP010000007.1 Protein Homology CDS 74325 74555 . - 0 ID=cds-WP_209026036.1;Parent=gene-JYJ20_RS03790;Dbxref=GenBank:WP_209026036.1;Name=WP_209026036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248204.1;locus_tag=JYJ20_RS03790;product=YceK/YidQ family lipoprotein;protein_id=WP_209026036.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 74685 75767 . + . ID=gene-JYJ20_RS03795;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=JYJ20_RS03795 NZ_JAFIRP010000007.1 Protein Homology CDS 74685 75767 . + 0 ID=cds-WP_006250766.1;Parent=gene-JYJ20_RS03795;Dbxref=GenBank:WP_006250766.1;Name=WP_006250766.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991329.1;locus_tag=JYJ20_RS03795;product=3-isopropylmalate dehydrogenase;protein_id=WP_006250766.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 75854 76249 . - . ID=gene-JYJ20_RS03800;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=JYJ20_RS03800 NZ_JAFIRP010000007.1 Protein Homology CDS 75854 76249 . - 0 ID=cds-WP_006248202.1;Parent=gene-JYJ20_RS03800;Dbxref=GenBank:WP_006248202.1;Name=WP_006248202.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262815.1;locus_tag=JYJ20_RS03800;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_006248202.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 76474 77478 . + . ID=gene-JYJ20_RS03805;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=JYJ20_RS03805 NZ_JAFIRP010000007.1 Protein Homology CDS 76474 77478 . + 0 ID=cds-WP_006248201.1;Parent=gene-JYJ20_RS03805;Dbxref=GenBank:WP_006248201.1;Name=WP_006248201.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010129843.1;locus_tag=JYJ20_RS03805;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_006248201.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 78254 79294 . - . ID=gene-JYJ20_RS03810;Name=JYJ20_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03810 NZ_JAFIRP010000007.1 Protein Homology CDS 78254 79294 . - 0 ID=cds-WP_061888613.1;Parent=gene-JYJ20_RS03810;Dbxref=GenBank:WP_061888613.1;Name=WP_061888613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248200.1;locus_tag=JYJ20_RS03810;product=phage portal protein;protein_id=WP_061888613.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 79303 81105 . - . ID=gene-JYJ20_RS03815;Name=JYJ20_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03815 NZ_JAFIRP010000007.1 Protein Homology CDS 79303 81105 . - 0 ID=cds-WP_209025998.1;Parent=gene-JYJ20_RS03815;Dbxref=GenBank:WP_209025998.1;Name=WP_209025998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248199.1;locus_tag=JYJ20_RS03815;product=terminase ATPase subunit family protein;protein_id=WP_209025998.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 81255 82082 . + . ID=gene-JYJ20_RS03820;Name=JYJ20_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03820 NZ_JAFIRP010000007.1 Protein Homology CDS 81255 82082 . + 0 ID=cds-WP_006252839.1;Parent=gene-JYJ20_RS03820;Dbxref=GenBank:WP_006252839.1;Name=WP_006252839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252839.1;locus_tag=JYJ20_RS03820;product=GPO family capsid scaffolding protein;protein_id=WP_006252839.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 82096 83124 . + . ID=gene-JYJ20_RS03825;Name=JYJ20_RS03825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03825 NZ_JAFIRP010000007.1 Protein Homology CDS 82096 83124 . + 0 ID=cds-WP_006250769.1;Parent=gene-JYJ20_RS03825;Dbxref=GenBank:WP_006250769.1;Name=WP_006250769.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250769.1;locus_tag=JYJ20_RS03825;product=phage major capsid protein%2C P2 family;protein_id=WP_006250769.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 83134 83823 . + . ID=gene-JYJ20_RS03830;Name=JYJ20_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03830 NZ_JAFIRP010000007.1 Protein Homology CDS 83134 83823 . + 0 ID=cds-WP_209025999.1;Parent=gene-JYJ20_RS03830;Dbxref=GenBank:WP_209025999.1;Name=WP_209025999.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252834.1;locus_tag=JYJ20_RS03830;product=phage terminase small subunit;protein_id=WP_209025999.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 83935 84450 . + . ID=gene-JYJ20_RS03835;Name=JYJ20_RS03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03835 NZ_JAFIRP010000007.1 Protein Homology CDS 83935 84450 . + 0 ID=cds-WP_006252832.1;Parent=gene-JYJ20_RS03835;Dbxref=GenBank:WP_006252832.1;Name=WP_006252832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248195.1;locus_tag=JYJ20_RS03835;product=head completion/stabilization protein;protein_id=WP_006252832.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 84447 84659 . + . ID=gene-JYJ20_RS03840;Name=JYJ20_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03840 NZ_JAFIRP010000007.1 Protein Homology CDS 84447 84659 . + 0 ID=cds-WP_006250771.1;Parent=gene-JYJ20_RS03840;Dbxref=GenBank:WP_006250771.1;Name=WP_006250771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250771.1;locus_tag=JYJ20_RS03840;product=tail protein X;protein_id=WP_006250771.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 84665 84871 . + . ID=gene-JYJ20_RS03845;Name=JYJ20_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03845 NZ_JAFIRP010000007.1 Protein Homology CDS 84665 84871 . + 0 ID=cds-WP_006250772.1;Parent=gene-JYJ20_RS03845;Dbxref=GenBank:WP_006250772.1;Name=WP_006250772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250772.1;locus_tag=JYJ20_RS03845;product=HP1 family phage holin;protein_id=WP_006250772.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 84864 85430 . + . ID=gene-JYJ20_RS03850;Name=JYJ20_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03850 NZ_JAFIRP010000007.1 Protein Homology CDS 84864 85430 . + 0 ID=cds-WP_161667838.1;Parent=gene-JYJ20_RS03850;Dbxref=GenBank:WP_161667838.1;Name=WP_161667838.1;Ontology_term=GO:0009253,GO:0016998,GO:0042742,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA,defense response to bacterium|0042742||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250773.1;locus_tag=JYJ20_RS03850;product=lysozyme;protein_id=WP_161667838.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 85427 85882 . + . ID=gene-JYJ20_RS03855;Name=JYJ20_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03855 NZ_JAFIRP010000007.1 Protein Homology CDS 85427 85882 . + 0 ID=cds-WP_006248210.1;Parent=gene-JYJ20_RS03855;Dbxref=GenBank:WP_006248210.1;Name=WP_006248210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248210.1;locus_tag=JYJ20_RS03855;product=hypothetical protein;protein_id=WP_006248210.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 85776 86006 . + . ID=gene-JYJ20_RS12440;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=JYJ20_RS12440 NZ_JAFIRP010000007.1 Protein Homology CDS 85776 86006 . + 0 ID=cds-WP_353080625.1;Parent=gene-JYJ20_RS12440;Dbxref=GenBank:WP_353080625.1;Name=WP_353080625.1;Note=LysC is an Rz1-like component of a phage lytic system%2C substantially overlapping although not fully embedded in the gene for the Rz-like LysB component.;gbkey=CDS;gene=lysC;inference=COORDINATES: protein motif:HMM:NF038368.1;locus_tag=JYJ20_RS12440;product=Rz1-like lysis system protein LysC;protein_id=WP_353080625.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 86031 86252 . + . ID=gene-JYJ20_RS03860;Name=JYJ20_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03860 NZ_JAFIRP010000007.1 Protein Homology CDS 86031 86252 . + 0 ID=cds-WP_006248194.1;Parent=gene-JYJ20_RS03860;Dbxref=GenBank:WP_006248194.1;Name=WP_006248194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248194.1;locus_tag=JYJ20_RS03860;product=TraR/DksA family transcriptional regulator;protein_id=WP_006248194.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 86249 86734 . + . ID=gene-JYJ20_RS03865;Name=JYJ20_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03865 NZ_JAFIRP010000007.1 Protein Homology CDS 86249 86734 . + 0 ID=cds-WP_040081084.1;Parent=gene-JYJ20_RS03865;Dbxref=GenBank:WP_040081084.1;Name=WP_040081084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252830.1;locus_tag=JYJ20_RS03865;product=phage tail protein;protein_id=WP_040081084.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 86727 87191 . + . ID=gene-JYJ20_RS03870;Name=JYJ20_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03870 NZ_JAFIRP010000007.1 Protein Homology CDS 86727 87191 . + 0 ID=cds-WP_209026000.1;Parent=gene-JYJ20_RS03870;Dbxref=GenBank:WP_209026000.1;Name=WP_209026000.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250775.1;locus_tag=JYJ20_RS03870;product=phage virion morphogenesis protein;protein_id=WP_209026000.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 87230 87472 . - . ID=gene-JYJ20_RS03875;Name=JYJ20_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03875 NZ_JAFIRP010000007.1 Protein Homology CDS 87230 87472 . - 0 ID=cds-WP_006250776.1;Parent=gene-JYJ20_RS03875;Dbxref=GenBank:WP_006250776.1;Name=WP_006250776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250776.1;locus_tag=JYJ20_RS03875;product=hypothetical protein;protein_id=WP_006250776.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 87518 90451 . + . ID=gene-JYJ20_RS03880;Name=JYJ20_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03880 NZ_JAFIRP010000007.1 Protein Homology CDS 87518 90451 . + 0 ID=cds-WP_209026001.1;Parent=gene-JYJ20_RS03880;Dbxref=GenBank:WP_209026001.1;Name=WP_209026001.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252828.1;locus_tag=JYJ20_RS03880;product=phage tail tape measure protein;protein_id=WP_209026001.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 90513 90692 . + . ID=gene-JYJ20_RS03885;Name=JYJ20_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03885 NZ_JAFIRP010000007.1 GeneMarkS-2+ CDS 90513 90692 . + 0 ID=cds-WP_006250778.1;Parent=gene-JYJ20_RS03885;Dbxref=GenBank:WP_006250778.1;Name=WP_006250778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS03885;product=hypothetical protein;protein_id=WP_006250778.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 90685 90972 . + . ID=gene-JYJ20_RS03890;Name=JYJ20_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03890 NZ_JAFIRP010000007.1 Protein Homology CDS 90685 90972 . + 0 ID=cds-WP_006250779.1;Parent=gene-JYJ20_RS03890;Dbxref=GenBank:WP_006250779.1;Name=WP_006250779.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250779.1;locus_tag=JYJ20_RS03890;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_006250779.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 91101 91706 . + . ID=gene-JYJ20_RS03895;Name=JYJ20_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03895 NZ_JAFIRP010000007.1 Protein Homology CDS 91101 91706 . + 0 ID=cds-WP_006248188.1;Parent=gene-JYJ20_RS03895;Dbxref=GenBank:WP_006248188.1;Name=WP_006248188.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252827.1;locus_tag=JYJ20_RS03895;product=phage baseplate assembly protein V;protein_id=WP_006248188.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 91706 92041 . + . ID=gene-JYJ20_RS03900;Name=JYJ20_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03900 NZ_JAFIRP010000007.1 Protein Homology CDS 91706 92041 . + 0 ID=cds-WP_006250780.1;Parent=gene-JYJ20_RS03900;Dbxref=GenBank:WP_006250780.1;Name=WP_006250780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248187.1;locus_tag=JYJ20_RS03900;product=GPW/gp25 family protein;protein_id=WP_006250780.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 92038 92952 . + . ID=gene-JYJ20_RS03905;Name=JYJ20_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03905 NZ_JAFIRP010000007.1 Protein Homology CDS 92038 92952 . + 0 ID=cds-WP_006250781.1;Parent=gene-JYJ20_RS03905;Dbxref=GenBank:WP_006250781.1;Name=WP_006250781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252826.1;locus_tag=JYJ20_RS03905;product=baseplate assembly protein;protein_id=WP_006250781.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 92942 93475 . + . ID=gene-JYJ20_RS03910;Name=JYJ20_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03910 NZ_JAFIRP010000007.1 Protein Homology CDS 92942 93475 . + 0 ID=cds-WP_006250782.1;Parent=gene-JYJ20_RS03910;Dbxref=GenBank:WP_006250782.1;Name=WP_006250782.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006995346.1;locus_tag=JYJ20_RS03910;product=phage tail protein I;protein_id=WP_006250782.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 93487 96219 . + . ID=gene-JYJ20_RS12080;Name=JYJ20_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12080 NZ_JAFIRP010000007.1 Protein Homology CDS 93487 96219 . + 0 ID=cds-WP_245155375.1;Parent=gene-JYJ20_RS12080;Dbxref=GenBank:WP_245155375.1;Name=WP_245155375.1;Ontology_term=GO:0098024;gbkey=CDS;go_component=virus tail%2C fiber|0098024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252825.1;locus_tag=JYJ20_RS12080;product=phage tail protein;protein_id=WP_245155375.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 96220 96822 . + . ID=gene-JYJ20_RS03920;Name=JYJ20_RS03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03920 NZ_JAFIRP010000007.1 Protein Homology CDS 96220 96822 . + 0 ID=cds-WP_209026002.1;Parent=gene-JYJ20_RS03920;Dbxref=GenBank:WP_209026002.1;Name=WP_209026002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249636.1;locus_tag=JYJ20_RS03920;product=hypothetical protein;protein_id=WP_209026002.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 96806 97078 . + . ID=gene-JYJ20_RS03925;Name=JYJ20_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03925 NZ_JAFIRP010000007.1 Protein Homology CDS 96806 97078 . + 0 ID=cds-WP_209026003.1;Parent=gene-JYJ20_RS03925;Dbxref=GenBank:WP_209026003.1;Name=WP_209026003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252822.1;locus_tag=JYJ20_RS03925;product=hypothetical protein;protein_id=WP_209026003.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 97185 98366 . + . ID=gene-JYJ20_RS03930;Name=JYJ20_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03930 NZ_JAFIRP010000007.1 Protein Homology CDS 97185 98366 . + 0 ID=cds-WP_209026004.1;Parent=gene-JYJ20_RS03930;Dbxref=GenBank:WP_209026004.1;Name=WP_209026004.1;Ontology_term=GO:0099000,GO:0098027;gbkey=CDS;go_component=virus tail%2C sheath|0098027||IEA;go_process=symbiont genome ejection through host cell envelope%2C contractile tail mechanism|0099000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248179.1;locus_tag=JYJ20_RS03930;product=phage tail sheath protein;protein_id=WP_209026004.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 98375 98881 . + . ID=gene-JYJ20_RS03935;Name=JYJ20_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03935 NZ_JAFIRP010000007.1 Protein Homology CDS 98375 98881 . + 0 ID=cds-WP_209026005.1;Parent=gene-JYJ20_RS03935;Dbxref=GenBank:WP_209026005.1;Name=WP_209026005.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248178.1;locus_tag=JYJ20_RS03935;product=phage major tail tube protein;protein_id=WP_209026005.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 98960 99286 . + . ID=gene-JYJ20_RS03940;Name=JYJ20_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03940 NZ_JAFIRP010000007.1 Protein Homology CDS 98960 99286 . + 0 ID=cds-WP_209026006.1;Parent=gene-JYJ20_RS03940;Dbxref=GenBank:WP_209026006.1;Name=WP_209026006.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250975.1;locus_tag=JYJ20_RS03940;product=phage tail assembly protein;protein_id=WP_209026006.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 99310 99426 . + . ID=gene-JYJ20_RS03945;Name=JYJ20_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03945 NZ_JAFIRP010000007.1 Protein Homology CDS 99310 99426 . + 0 ID=cds-WP_080551164.1;Parent=gene-JYJ20_RS03945;Dbxref=GenBank:WP_080551164.1;Name=WP_080551164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005758280.1;locus_tag=JYJ20_RS03945;product=GpE family phage tail protein;protein_id=WP_080551164.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 99489 99653 . + . ID=gene-JYJ20_RS03950;Name=JYJ20_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03950 NZ_JAFIRP010000007.1 GeneMarkS-2+ CDS 99489 99653 . + 0 ID=cds-WP_209026007.1;Parent=gene-JYJ20_RS03950;Dbxref=GenBank:WP_209026007.1;Name=WP_209026007.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS03950;product=hypothetical protein;protein_id=WP_209026007.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 99653 100090 . + . ID=gene-JYJ20_RS03955;Name=JYJ20_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03955 NZ_JAFIRP010000007.1 Protein Homology CDS 99653 100090 . + 0 ID=cds-WP_006252817.1;Parent=gene-JYJ20_RS03955;Dbxref=GenBank:WP_006252817.1;Name=WP_006252817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252817.1;locus_tag=JYJ20_RS03955;product=phage tail protein;protein_id=WP_006252817.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 100090 101328 . + . ID=gene-JYJ20_RS03960;Name=JYJ20_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03960 NZ_JAFIRP010000007.1 Protein Homology CDS 100090 101328 . + 0 ID=cds-WP_209026008.1;Parent=gene-JYJ20_RS03960;Dbxref=GenBank:WP_209026008.1;Name=WP_209026008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248174.1;locus_tag=JYJ20_RS03960;product=phage late control D family protein;protein_id=WP_209026008.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 101619 102320 . - . ID=gene-JYJ20_RS03965;Name=JYJ20_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03965 NZ_JAFIRP010000007.1 Protein Homology CDS 101619 102320 . - 0 ID=cds-WP_245155376.1;Parent=gene-JYJ20_RS03965;Dbxref=GenBank:WP_245155376.1;Name=WP_245155376.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024098.7;locus_tag=JYJ20_RS03965;product=DUF3800 domain-containing protein;protein_id=WP_245155376.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 102330 102611 . - . ID=gene-JYJ20_RS03970;Name=JYJ20_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03970 NZ_JAFIRP010000007.1 Protein Homology CDS 102330 102611 . - 0 ID=cds-WP_209026009.1;Parent=gene-JYJ20_RS03970;Dbxref=GenBank:WP_209026009.1;Name=WP_209026009.1;Ontology_term=GO:0005509;gbkey=CDS;go_function=calcium ion binding|0005509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248172.1;locus_tag=JYJ20_RS03970;product=excalibur calcium-binding domain-containing protein;protein_id=WP_209026009.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 102622 103008 . - . ID=gene-JYJ20_RS03975;Name=JYJ20_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03975 NZ_JAFIRP010000007.1 GeneMarkS-2+ CDS 102622 103008 . - 0 ID=cds-WP_159630122.1;Parent=gene-JYJ20_RS03975;Dbxref=GenBank:WP_159630122.1;Name=WP_159630122.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS03975;product=hypothetical protein;protein_id=WP_159630122.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 103031 103585 . - . ID=gene-JYJ20_RS03980;Name=JYJ20_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03980 NZ_JAFIRP010000007.1 GeneMarkS-2+ CDS 103031 103585 . - 0 ID=cds-WP_209026010.1;Parent=gene-JYJ20_RS03980;Dbxref=GenBank:WP_209026010.1;Name=WP_209026010.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS03980;product=hypothetical protein;protein_id=WP_209026010.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 103551 103682 . - . ID=gene-JYJ20_RS12335;Name=JYJ20_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12335 NZ_JAFIRP010000007.1 GeneMarkS-2+ CDS 103551 103682 . - 0 ID=cds-WP_280633512.1;Parent=gene-JYJ20_RS12335;Dbxref=GenBank:WP_280633512.1;Name=WP_280633512.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS12335;product=hypothetical protein;protein_id=WP_280633512.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 103730 104158 . - . ID=gene-JYJ20_RS03985;Name=JYJ20_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03985 NZ_JAFIRP010000007.1 Protein Homology CDS 103730 104158 . - 0 ID=cds-WP_209026011.1;Parent=gene-JYJ20_RS03985;Dbxref=GenBank:WP_209026011.1;Name=WP_209026011.1;Ontology_term=GO:0045892,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: protein motif:HMM:NF018697.7;locus_tag=JYJ20_RS03985;product=helix-turn-helix domain-containing protein;protein_id=WP_209026011.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 104295 104582 . + . ID=gene-JYJ20_RS03990;Name=JYJ20_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03990 NZ_JAFIRP010000007.1 GeneMarkS-2+ CDS 104295 104582 . + 0 ID=cds-WP_209026012.1;Parent=gene-JYJ20_RS03990;Dbxref=GenBank:WP_209026012.1;Name=WP_209026012.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS03990;product=hypothetical protein;protein_id=WP_209026012.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 104613 104828 . + . ID=gene-JYJ20_RS03995;Name=JYJ20_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS03995 NZ_JAFIRP010000007.1 GeneMarkS-2+ CDS 104613 104828 . + 0 ID=cds-WP_209026013.1;Parent=gene-JYJ20_RS03995;Dbxref=GenBank:WP_209026013.1;Name=WP_209026013.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS03995;product=hypothetical protein;protein_id=WP_209026013.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 104775 105158 . - . ID=gene-JYJ20_RS04000;Name=JYJ20_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04000 NZ_JAFIRP010000007.1 GeneMarkS-2+ CDS 104775 105158 . - 0 ID=cds-WP_209026014.1;Parent=gene-JYJ20_RS04000;Dbxref=GenBank:WP_209026014.1;Name=WP_209026014.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS04000;product=hypothetical protein;protein_id=WP_209026014.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 105221 105388 . + . ID=gene-JYJ20_RS04005;Name=JYJ20_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04005 NZ_JAFIRP010000007.1 GeneMarkS-2+ CDS 105221 105388 . + 0 ID=cds-WP_209026015.1;Parent=gene-JYJ20_RS04005;Dbxref=GenBank:WP_209026015.1;Name=WP_209026015.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS04005;product=hypothetical protein;protein_id=WP_209026015.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 105535 105780 . - . ID=gene-JYJ20_RS04010;Name=JYJ20_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04010 NZ_JAFIRP010000007.1 Protein Homology CDS 105535 105780 . - 0 ID=cds-WP_209026016.1;Parent=gene-JYJ20_RS04010;Dbxref=GenBank:WP_209026016.1;Name=WP_209026016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250965.1;locus_tag=JYJ20_RS04010;product=hypothetical protein;protein_id=WP_209026016.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 105921 106193 . + . ID=gene-JYJ20_RS04015;Name=JYJ20_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04015 NZ_JAFIRP010000007.1 Protein Homology CDS 105921 106193 . + 0 ID=cds-WP_006248166.1;Parent=gene-JYJ20_RS04015;Dbxref=GenBank:WP_006248166.1;Name=WP_006248166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248166.1;locus_tag=JYJ20_RS04015;product=hypothetical protein;protein_id=WP_006248166.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 106276 106608 . + . ID=gene-JYJ20_RS04020;Name=JYJ20_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04020 NZ_JAFIRP010000007.1 Protein Homology CDS 106276 106608 . + 0 ID=cds-WP_006248165.1;Parent=gene-JYJ20_RS04020;Dbxref=GenBank:WP_006248165.1;Name=WP_006248165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248165.1;locus_tag=JYJ20_RS04020;product=hypothetical protein;protein_id=WP_006248165.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 106621 106914 . + . ID=gene-JYJ20_RS04025;Name=JYJ20_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04025 NZ_JAFIRP010000007.1 Protein Homology CDS 106621 106914 . + 0 ID=cds-WP_176670013.1;Parent=gene-JYJ20_RS04025;Dbxref=GenBank:WP_176670013.1;Name=WP_176670013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248164.1;locus_tag=JYJ20_RS04025;product=hypothetical protein;protein_id=WP_176670013.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 106923 107051 . + . ID=gene-JYJ20_RS12340;Name=JYJ20_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12340 NZ_JAFIRP010000007.1 GeneMarkS-2+ CDS 106923 107051 . + 0 ID=cds-WP_006248163.1;Parent=gene-JYJ20_RS12340;Dbxref=GenBank:WP_006248163.1;Name=WP_006248163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS12340;product=hypothetical protein;protein_id=WP_006248163.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 107063 107305 . + . ID=gene-JYJ20_RS04030;Name=JYJ20_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04030 NZ_JAFIRP010000007.1 Protein Homology CDS 107063 107305 . + 0 ID=cds-WP_006248162.1;Parent=gene-JYJ20_RS04030;Dbxref=GenBank:WP_006248162.1;Name=WP_006248162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248162.1;locus_tag=JYJ20_RS04030;product=hypothetical protein;protein_id=WP_006248162.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 107302 107634 . + . ID=gene-JYJ20_RS04035;Name=JYJ20_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04035 NZ_JAFIRP010000007.1 Protein Homology CDS 107302 107634 . + 0 ID=cds-WP_209026017.1;Parent=gene-JYJ20_RS04035;Dbxref=GenBank:WP_209026017.1;Name=WP_209026017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248161.1;locus_tag=JYJ20_RS04035;product=hypothetical protein;protein_id=WP_209026017.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 107631 109997 . + . ID=gene-JYJ20_RS04040;Name=JYJ20_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04040 NZ_JAFIRP010000007.1 Protein Homology CDS 107631 109997 . + 0 ID=cds-WP_209026018.1;Parent=gene-JYJ20_RS04040;Dbxref=GenBank:WP_209026018.1;Name=WP_209026018.1;Ontology_term=GO:0006260,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248160.1;locus_tag=JYJ20_RS04040;product=replication endonuclease;protein_id=WP_209026018.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 110185 110628 . + . ID=gene-JYJ20_RS04045;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=JYJ20_RS04045 NZ_JAFIRP010000007.1 Protein Homology CDS 110185 110628 . + 0 ID=cds-WP_209026019.1;Parent=gene-JYJ20_RS04045;Dbxref=GenBank:WP_209026019.1;Name=WP_209026019.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248158.1;locus_tag=JYJ20_RS04045;product=single-stranded DNA-binding protein;protein_id=WP_209026019.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 110660 110968 . + . ID=gene-JYJ20_RS04050;Name=JYJ20_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04050 NZ_JAFIRP010000007.1 Protein Homology CDS 110660 110968 . + 0 ID=cds-WP_245155377.1;Parent=gene-JYJ20_RS04050;Dbxref=GenBank:WP_245155377.1;Name=WP_245155377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252808.1;locus_tag=JYJ20_RS04050;product=DUF6378 domain-containing protein;protein_id=WP_245155377.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 110971 111267 . + . ID=gene-JYJ20_RS04055;Name=JYJ20_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04055 NZ_JAFIRP010000007.1 Protein Homology CDS 110971 111267 . + 0 ID=cds-WP_209026021.1;Parent=gene-JYJ20_RS04055;Dbxref=GenBank:WP_209026021.1;Name=WP_209026021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252806.1;locus_tag=JYJ20_RS04055;product=hypothetical protein;protein_id=WP_209026021.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 111267 111764 . + . ID=gene-JYJ20_RS04060;Name=JYJ20_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04060 NZ_JAFIRP010000007.1 Protein Homology CDS 111267 111764 . + 0 ID=cds-WP_032844602.1;Parent=gene-JYJ20_RS04060;Dbxref=GenBank:WP_032844602.1;Name=WP_032844602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248809.1;locus_tag=JYJ20_RS04060;product=methyltransferase;protein_id=WP_032844602.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 111817 111999 . - . ID=gene-JYJ20_RS04065;Name=JYJ20_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04065 NZ_JAFIRP010000007.1 Protein Homology CDS 111817 111999 . - 0 ID=cds-WP_006248154.1;Parent=gene-JYJ20_RS04065;Dbxref=GenBank:WP_006248154.1;Name=WP_006248154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248154.1;locus_tag=JYJ20_RS04065;product=hypothetical protein;protein_id=WP_006248154.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 112277 113275 . - . ID=gene-JYJ20_RS04070;Name=JYJ20_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04070 NZ_JAFIRP010000007.1 Protein Homology CDS 112277 113275 . - 0 ID=cds-WP_209026022.1;Parent=gene-JYJ20_RS04070;Dbxref=GenBank:WP_209026022.1;Name=WP_209026022.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248153.1;locus_tag=JYJ20_RS04070;product=tyrosine-type recombinase/integrase;protein_id=WP_209026022.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 113501 113577 . - . ID=gene-JYJ20_RS04075;Name=JYJ20_RS04075;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS04075 NZ_JAFIRP010000007.1 tRNAscan-SE tRNA 113501 113577 . - . ID=rna-JYJ20_RS04075;Parent=gene-JYJ20_RS04075;anticodon=(pos:complement(113541..113543));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS04075;product=tRNA-Val NZ_JAFIRP010000007.1 tRNAscan-SE exon 113501 113577 . - . ID=exon-JYJ20_RS04075-1;Parent=rna-JYJ20_RS04075;anticodon=(pos:complement(113541..113543));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS04075;product=tRNA-Val NZ_JAFIRP010000007.1 RefSeq gene 113641 114441 . - . ID=gene-JYJ20_RS04080;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=JYJ20_RS04080 NZ_JAFIRP010000007.1 Protein Homology CDS 113641 114441 . - 0 ID=cds-WP_006248152.1;Parent=gene-JYJ20_RS04080;Dbxref=GenBank:WP_006248152.1;Name=WP_006248152.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991397.1;locus_tag=JYJ20_RS04080;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_006248152.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 114533 116509 . - . ID=gene-JYJ20_RS04085;Name=JYJ20_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04085 NZ_JAFIRP010000007.1 Protein Homology CDS 114533 116509 . - 0 ID=cds-WP_209026023.1;Parent=gene-JYJ20_RS04085;Dbxref=GenBank:WP_209026023.1;Name=WP_209026023.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005617246.1;locus_tag=JYJ20_RS04085;product=exoribonuclease II;protein_id=WP_209026023.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 116669 116947 . + . ID=gene-JYJ20_RS04090;Name=JYJ20_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04090 NZ_JAFIRP010000007.1 Protein Homology CDS 116669 116947 . + 0 ID=cds-WP_006248149.1;Parent=gene-JYJ20_RS04090;Dbxref=GenBank:WP_006248149.1;Name=WP_006248149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248149.1;locus_tag=JYJ20_RS04090;product=Bor family protein;protein_id=WP_006248149.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 116972 117268 . + . ID=gene-JYJ20_RS04095;Name=JYJ20_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04095 NZ_JAFIRP010000007.1 Protein Homology CDS 116972 117268 . + 0 ID=cds-WP_006248148.1;Parent=gene-JYJ20_RS04095;Dbxref=GenBank:WP_006248148.1;Name=WP_006248148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248148.1;locus_tag=JYJ20_RS04095;product=Bor family protein;protein_id=WP_006248148.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 117321 118112 . - . ID=gene-JYJ20_RS04100;Name=JYJ20_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04100 NZ_JAFIRP010000007.1 Protein Homology CDS 117321 118112 . - 0 ID=cds-WP_006248147.1;Parent=gene-JYJ20_RS04100;Dbxref=GenBank:WP_006248147.1;Name=WP_006248147.1;Ontology_term=GO:0030497,GO:0004318;gbkey=CDS;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid elongation|0030497||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252801.1;locus_tag=JYJ20_RS04100;product=enoyl-ACP reductase FabI;protein_id=WP_006248147.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 118256 119029 . - . ID=gene-JYJ20_RS04105;Name=JYJ20_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04105 NZ_JAFIRP010000007.1 Protein Homology CDS 118256 119029 . - 0 ID=cds-WP_006251533.1;Parent=gene-JYJ20_RS04105;Dbxref=GenBank:WP_006251533.1;Name=WP_006251533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991492.1;locus_tag=JYJ20_RS04105;product=FNR family transcription factor;protein_id=WP_006251533.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 119260 119685 . + . ID=gene-JYJ20_RS04110;Name=JYJ20_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04110 NZ_JAFIRP010000007.1 Protein Homology CDS 119260 119685 . + 0 ID=cds-WP_006248145.1;Parent=gene-JYJ20_RS04110;Dbxref=GenBank:WP_006248145.1;Name=WP_006248145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252799.1;locus_tag=JYJ20_RS04110;product=universal stress protein;protein_id=WP_006248145.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 119880 122507 . + . ID=gene-JYJ20_RS04115;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=JYJ20_RS04115 NZ_JAFIRP010000007.1 Protein Homology CDS 119880 122507 . + 0 ID=cds-WP_006248143.1;Parent=gene-JYJ20_RS04115;Dbxref=GenBank:WP_006248143.1;Name=WP_006248143.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622703.1;locus_tag=JYJ20_RS04115;product=alanine--tRNA ligase;protein_id=WP_006248143.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 122597 122782 . + . ID=gene-JYJ20_RS04120;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=JYJ20_RS04120 NZ_JAFIRP010000007.1 Protein Homology CDS 122597 122782 . + 0 ID=cds-WP_006248142.1;Parent=gene-JYJ20_RS04120;Dbxref=GenBank:WP_006248142.1;Name=WP_006248142.1;Ontology_term=GO:0006109,GO:0006402,GO:0003723;gbkey=CDS;gene=csrA;go_function=RNA binding|0003723||IEA;go_process=regulation of carbohydrate metabolic process|0006109||IEA,mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005711547.1;locus_tag=JYJ20_RS04120;product=carbon storage regulator CsrA;protein_id=WP_006248142.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 122918 123805 . + . ID=gene-JYJ20_RS04125;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=JYJ20_RS04125 NZ_JAFIRP010000007.1 Protein Homology CDS 122918 123805 . + 0 ID=cds-WP_006248141.1;Parent=gene-JYJ20_RS04125;Dbxref=GenBank:WP_006248141.1;Name=WP_006248141.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018652974.1;locus_tag=JYJ20_RS04125;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_006248141.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 124070 125413 . + . ID=gene-JYJ20_RS04130;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=JYJ20_RS04130 NZ_JAFIRP010000007.1 Protein Homology CDS 124070 125413 . + 0 ID=cds-WP_006248140.1;Parent=gene-JYJ20_RS04130;Dbxref=GenBank:WP_006248140.1;Name=WP_006248140.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011848432.1;locus_tag=JYJ20_RS04130;product=chromosome partition protein MukF;protein_id=WP_006248140.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 125462 126178 . + . ID=gene-JYJ20_RS04135;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=JYJ20_RS04135 NZ_JAFIRP010000007.1 Protein Homology CDS 125462 126178 . + 0 ID=cds-WP_006248139.1;Parent=gene-JYJ20_RS04135;Dbxref=GenBank:WP_006248139.1;Name=WP_006248139.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009500482.1;locus_tag=JYJ20_RS04135;product=chromosome partition protein MukE;protein_id=WP_006248139.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 126354 130814 . + . ID=gene-JYJ20_RS04140;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=JYJ20_RS04140 NZ_JAFIRP010000007.1 Protein Homology CDS 126354 130814 . + 0 ID=cds-WP_209026024.1;Parent=gene-JYJ20_RS04140;Dbxref=GenBank:WP_209026024.1;Name=WP_209026024.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252796.1;locus_tag=JYJ20_RS04140;product=chromosome partition protein MukB;protein_id=WP_209026024.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq pseudogene 130967 131934 . + . ID=gene-JYJ20_RS04150;Name=JYJ20_RS04150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS04150;pseudo=true NZ_JAFIRP010000007.1 Protein Homology CDS 130967 131934 . + 0 ID=cds-JYJ20_RS04150;Parent=gene-JYJ20_RS04150;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618883.1;locus_tag=JYJ20_RS04150;product=MFS transporter;pseudo=true;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 132001 133734 . - . ID=gene-JYJ20_RS04155;Name=JYJ20_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04155 NZ_JAFIRP010000007.1 Protein Homology CDS 132001 133734 . - 0 ID=cds-WP_006253659.1;Parent=gene-JYJ20_RS04155;Dbxref=GenBank:WP_006253659.1;Name=WP_006253659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607412.1;locus_tag=JYJ20_RS04155;product=DUF3413 domain-containing protein;protein_id=WP_006253659.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 133739 133960 . - . ID=gene-JYJ20_RS04160;Name=JYJ20_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04160 NZ_JAFIRP010000007.1 Protein Homology CDS 133739 133960 . - 0 ID=cds-WP_006248136.1;Parent=gene-JYJ20_RS04160;Dbxref=GenBank:WP_006248136.1;Name=WP_006248136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607413.1;locus_tag=JYJ20_RS04160;product=YejL family protein;protein_id=WP_006248136.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 134199 134771 . + . ID=gene-JYJ20_RS04165;Name=JYJ20_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04165 NZ_JAFIRP010000007.1 Protein Homology CDS 134199 134771 . + 0 ID=cds-WP_006251539.1;Parent=gene-JYJ20_RS04165;Dbxref=GenBank:WP_006251539.1;Name=WP_006251539.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251539.1;locus_tag=JYJ20_RS04165;product=TetR/AcrR family transcriptional regulator;protein_id=WP_006251539.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 134802 136007 . + . ID=gene-JYJ20_RS04170;Name=JYJ20_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04170 NZ_JAFIRP010000007.1 Protein Homology CDS 134802 136007 . + 0 ID=cds-WP_006248134.1;Parent=gene-JYJ20_RS04170;Dbxref=GenBank:WP_006248134.1;Name=WP_006248134.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614807.1;locus_tag=JYJ20_RS04170;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_006248134.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 136021 139188 . + . ID=gene-JYJ20_RS04175;Name=JYJ20_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04175 NZ_JAFIRP010000007.1 Protein Homology CDS 136021 139188 . + 0 ID=cds-WP_209026025.1;Parent=gene-JYJ20_RS04175;Dbxref=GenBank:WP_209026025.1;Name=WP_209026025.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015587060.1;locus_tag=JYJ20_RS04175;product=efflux RND transporter permease subunit;protein_id=WP_209026025.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 139416 140879 . + . ID=gene-JYJ20_RS04180;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=JYJ20_RS04180 NZ_JAFIRP010000007.1 Protein Homology CDS 139416 140879 . + 0 ID=cds-WP_006248132.1;Parent=gene-JYJ20_RS04180;Dbxref=GenBank:WP_006248132.1;Name=WP_006248132.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005725353.1;locus_tag=JYJ20_RS04180;product=IMP dehydrogenase;protein_id=WP_006248132.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 141000 141671 . + . ID=gene-JYJ20_RS04185;Name=JYJ20_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04185 NZ_JAFIRP010000007.1 Protein Homology CDS 141000 141671 . + 0 ID=cds-WP_006248131.1;Parent=gene-JYJ20_RS04185;Dbxref=GenBank:WP_006248131.1;Name=WP_006248131.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248131.1;locus_tag=JYJ20_RS04185;product=HAD family hydrolase;protein_id=WP_006248131.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 141793 142104 . + . ID=gene-JYJ20_RS04190;Name=JYJ20_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04190 NZ_JAFIRP010000007.1 Protein Homology CDS 141793 142104 . + 0 ID=cds-WP_006248130.1;Parent=gene-JYJ20_RS04190;Dbxref=GenBank:WP_006248130.1;Name=WP_006248130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248130.1;locus_tag=JYJ20_RS04190;product=hypothetical protein;protein_id=WP_006248130.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 142121 143692 . + . ID=gene-JYJ20_RS04195;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=JYJ20_RS04195 NZ_JAFIRP010000007.1 Protein Homology CDS 142121 143692 . + 0 ID=cds-WP_006248129.1;Parent=gene-JYJ20_RS04195;Dbxref=GenBank:WP_006248129.1;Name=WP_006248129.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550523.1;locus_tag=JYJ20_RS04195;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_006248129.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 143853 144248 . - . ID=gene-JYJ20_RS04200;Name=JYJ20_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04200 NZ_JAFIRP010000007.1 Protein Homology CDS 143853 144248 . - 0 ID=cds-WP_006248128.1;Parent=gene-JYJ20_RS04200;Dbxref=GenBank:WP_006248128.1;Name=WP_006248128.1;Ontology_term=GO:0051301,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248128.1;locus_tag=JYJ20_RS04200;product=Z-ring associated ZapG family protein;protein_id=WP_006248128.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 144547 144975 . + . ID=gene-JYJ20_RS04205;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=JYJ20_RS04205 NZ_JAFIRP010000007.1 Protein Homology CDS 144547 144975 . + 0 ID=cds-WP_006251543.1;Parent=gene-JYJ20_RS04205;Dbxref=GenBank:WP_006251543.1;Name=WP_006251543.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=JYJ20_RS04205;product=50S ribosomal protein L13;protein_id=WP_006251543.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 144992 145387 . + . ID=gene-JYJ20_RS04210;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=JYJ20_RS04210 NZ_JAFIRP010000007.1 Protein Homology CDS 144992 145387 . + 0 ID=cds-WP_006249344.1;Parent=gene-JYJ20_RS04210;Dbxref=GenBank:WP_006249344.1;Name=WP_006249344.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015432457.1;locus_tag=JYJ20_RS04210;product=30S ribosomal protein S9;protein_id=WP_006249344.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 147155 147685 . + . ID=gene-JYJ20_RS12500;Name=JYJ20_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12500 NZ_JAFIRP010000007.1 Protein Homology CDS 147155 147685 . + 0 ID=cds-WP_015484231.1;Parent=gene-JYJ20_RS12500;Dbxref=GenBank:WP_015484231.1;Name=WP_015484231.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025039.7;locus_tag=JYJ20_RS12500;product=reverse transcriptase N-terminal domain-containing protein;protein_id=WP_015484231.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 147686 148264 . + . ID=gene-JYJ20_RS12505;Name=JYJ20_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12505 NZ_JAFIRP010000007.1 Protein Homology CDS 147686 148264 . + 0 ID=cds-WP_075270713.1;Parent=gene-JYJ20_RS12505;Dbxref=GenBank:WP_075270713.1;Name=WP_075270713.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012307.7;locus_tag=JYJ20_RS12505;product=reverse transcriptase domain-containing protein;protein_id=WP_075270713.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 148261 148686 . + . ID=gene-JYJ20_RS12090;Name=JYJ20_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12090 NZ_JAFIRP010000007.1 Protein Homology CDS 148261 148686 . + 0 ID=cds-WP_245155378.1;Parent=gene-JYJ20_RS12090;Dbxref=GenBank:WP_245155378.1;Name=WP_245155378.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019984.7;locus_tag=JYJ20_RS12090;product=group II intron maturase-specific domain-containing protein;protein_id=WP_245155378.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 148646 148873 . + . ID=gene-JYJ20_RS12095;Name=JYJ20_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12095 NZ_JAFIRP010000007.1 Protein Homology CDS 148646 148873 . + 0 ID=cds-WP_245155379.1;Parent=gene-JYJ20_RS12095;Dbxref=GenBank:WP_245155379.1;Name=WP_245155379.1;Ontology_term=GO:0003676,GO:0004519,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:NF013964.7;locus_tag=JYJ20_RS12095;product=HNH endonuclease;protein_id=WP_245155379.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 149062 149838 . + . ID=gene-JYJ20_RS04220;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=JYJ20_RS04220 NZ_JAFIRP010000007.1 Protein Homology CDS 149062 149838 . + 0 ID=cds-WP_006249343.1;Parent=gene-JYJ20_RS04220;Dbxref=GenBank:WP_006249343.1;Name=WP_006249343.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005622827.1;locus_tag=JYJ20_RS04220;product=peroxide stress protein YaaA;protein_id=WP_006249343.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 149838 150401 . + . ID=gene-JYJ20_RS04225;Name=JYJ20_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04225 NZ_JAFIRP010000007.1 Protein Homology CDS 149838 150401 . + 0 ID=cds-WP_006249342.1;Parent=gene-JYJ20_RS04225;Dbxref=GenBank:WP_006249342.1;Name=WP_006249342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249342.1;locus_tag=JYJ20_RS04225;product=hypothetical protein;protein_id=WP_006249342.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 150410 151315 . + . ID=gene-JYJ20_RS04230;Name=JYJ20_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04230 NZ_JAFIRP010000007.1 Protein Homology CDS 150410 151315 . + 0 ID=cds-WP_006249341.1;Parent=gene-JYJ20_RS04230;Dbxref=GenBank:WP_006249341.1;Name=WP_006249341.1;Ontology_term=GO:0006812,GO:0008324,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,efflux transmembrane transporter activity|0015562||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249341.1;locus_tag=JYJ20_RS04230;product=cation diffusion facilitator family transporter;protein_id=WP_006249341.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 151315 152067 . + . ID=gene-JYJ20_RS04235;Name=JYJ20_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04235 NZ_JAFIRP010000007.1 Protein Homology CDS 151315 152067 . + 0 ID=cds-WP_006249340.1;Parent=gene-JYJ20_RS04235;Dbxref=GenBank:WP_006249340.1;Name=WP_006249340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249340.1;locus_tag=JYJ20_RS04235;product=Zn-ribbon-containing protein;protein_id=WP_006249340.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 152168 153493 . + . ID=gene-JYJ20_RS04240;Name=JYJ20_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04240 NZ_JAFIRP010000007.1 Protein Homology CDS 152168 153493 . + 0 ID=cds-WP_006249339.1;Parent=gene-JYJ20_RS04240;Dbxref=GenBank:WP_006249339.1;Name=WP_006249339.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607441.1;locus_tag=JYJ20_RS04240;product=L-cystine transporter;protein_id=WP_006249339.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 153553 154212 . - . ID=gene-JYJ20_RS04245;Name=JYJ20_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04245 NZ_JAFIRP010000007.1 Protein Homology CDS 153553 154212 . - 0 ID=cds-WP_006249338.1;Parent=gene-JYJ20_RS04245;Dbxref=GenBank:WP_006249338.1;Name=WP_006249338.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875387.1;locus_tag=JYJ20_RS04245;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_006249338.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 154441 155427 . + . ID=gene-JYJ20_RS04250;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=JYJ20_RS04250 NZ_JAFIRP010000007.1 Protein Homology CDS 154441 155427 . + 0 ID=cds-WP_006249336.1;Parent=gene-JYJ20_RS04250;Dbxref=GenBank:WP_006249336.1;Name=WP_006249336.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005607445.1;locus_tag=JYJ20_RS04250;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_006249336.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 155475 157862 . + . ID=gene-JYJ20_RS04255;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=JYJ20_RS04255 NZ_JAFIRP010000007.1 Protein Homology CDS 155475 157862 . + 0 ID=cds-WP_006249335.1;Parent=gene-JYJ20_RS04255;Dbxref=GenBank:WP_006249335.1;Name=WP_006249335.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012262881.1;locus_tag=JYJ20_RS04255;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_006249335.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 157920 158216 . + . ID=gene-JYJ20_RS04260;Name=JYJ20_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04260 NZ_JAFIRP010000007.1 Protein Homology CDS 157920 158216 . + 0 ID=cds-WP_006249334.1;Parent=gene-JYJ20_RS04260;Dbxref=GenBank:WP_006249334.1;Name=WP_006249334.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006718254.1;locus_tag=JYJ20_RS04260;product=integration host factor subunit alpha;protein_id=WP_006249334.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 158255 158776 . + . ID=gene-JYJ20_RS04265;Name=JYJ20_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04265 NZ_JAFIRP010000007.1 Protein Homology CDS 158255 158776 . + 0 ID=cds-WP_006249333.1;Parent=gene-JYJ20_RS04265;Dbxref=GenBank:WP_006249333.1;Name=WP_006249333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251185.1;locus_tag=JYJ20_RS04265;product=NlpC/P60 family protein;protein_id=WP_006249333.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 158792 159835 . + . ID=gene-JYJ20_RS04270;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=JYJ20_RS04270 NZ_JAFIRP010000007.1 Protein Homology CDS 158792 159835 . + 0 ID=cds-WP_006249332.1;Parent=gene-JYJ20_RS04270;Dbxref=GenBank:WP_006249332.1;Name=WP_006249332.1;Ontology_term=GO:0008236,GO:0045152,GO:0030288;gbkey=CDS;gene=degS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=serine-type peptidase activity|0008236||IEA,antisigma factor binding|0045152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249332.1;locus_tag=JYJ20_RS04270;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_006249332.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 159844 160518 . + . ID=gene-JYJ20_RS04275;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=JYJ20_RS04275 NZ_JAFIRP010000007.1 Protein Homology CDS 159844 160518 . + 0 ID=cds-WP_006253657.1;Parent=gene-JYJ20_RS04275;Dbxref=GenBank:WP_006253657.1;Name=WP_006253657.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253657.1;locus_tag=JYJ20_RS04275;product=(d)CMP kinase;protein_id=WP_006253657.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 160610 162277 . + . ID=gene-JYJ20_RS04280;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=JYJ20_RS04280 NZ_JAFIRP010000007.1 Protein Homology CDS 160610 162277 . + 0 ID=cds-WP_209026026.1;Parent=gene-JYJ20_RS04280;Dbxref=GenBank:WP_209026026.1;Name=WP_209026026.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618961.1;locus_tag=JYJ20_RS04280;product=30S ribosomal protein S1;protein_id=WP_209026026.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 162406 162687 . + . ID=gene-JYJ20_RS04285;Name=JYJ20_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04285 NZ_JAFIRP010000007.1 Protein Homology CDS 162406 162687 . + 0 ID=cds-WP_006248556.1;Parent=gene-JYJ20_RS04285;Dbxref=GenBank:WP_006248556.1;Name=WP_006248556.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597138.1;locus_tag=JYJ20_RS04285;product=integration host factor subunit beta;protein_id=WP_006248556.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 162724 163011 . + . ID=gene-JYJ20_RS04290;Name=JYJ20_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04290 NZ_JAFIRP010000007.1 Protein Homology CDS 162724 163011 . + 0 ID=cds-WP_006251188.1;Parent=gene-JYJ20_RS04290;Dbxref=GenBank:WP_006251188.1;Name=WP_006251188.1;Ontology_term=GO:0008653,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248557.1;locus_tag=JYJ20_RS04290;product=LapA family protein;protein_id=WP_006251188.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 163015 164211 . + . ID=gene-JYJ20_RS04295;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=JYJ20_RS04295 NZ_JAFIRP010000007.1 Protein Homology CDS 163015 164211 . + 0 ID=cds-WP_006248558.1;Parent=gene-JYJ20_RS04295;Dbxref=GenBank:WP_006248558.1;Name=WP_006248558.1;gbkey=CDS;gene=lapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248558.1;locus_tag=JYJ20_RS04295;product=lipopolysaccharide assembly protein LapB;protein_id=WP_006248558.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 164235 164927 . + . ID=gene-JYJ20_RS04300;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=JYJ20_RS04300 NZ_JAFIRP010000007.1 Protein Homology CDS 164235 164927 . + 0 ID=cds-WP_006248559.1;Parent=gene-JYJ20_RS04300;Dbxref=GenBank:WP_006248559.1;Name=WP_006248559.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248559.1;locus_tag=JYJ20_RS04300;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_006248559.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 165010 165321 . + . ID=gene-JYJ20_RS04305;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=JYJ20_RS04305 NZ_JAFIRP010000007.1 Protein Homology CDS 165010 165321 . + 0 ID=cds-WP_006248560.1;Parent=gene-JYJ20_RS04305;Dbxref=GenBank:WP_006248560.1;Name=WP_006248560.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597129.1;locus_tag=JYJ20_RS04305;product=stress response translation initiation inhibitor YciH;protein_id=WP_006248560.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 165424 167586 . + . ID=gene-JYJ20_RS04310;Name=JYJ20_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04310 NZ_JAFIRP010000007.1 Protein Homology CDS 165424 167586 . + 0 ID=cds-WP_006248561.1;Parent=gene-JYJ20_RS04310;Dbxref=GenBank:WP_006248561.1;Name=WP_006248561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248561.1;locus_tag=JYJ20_RS04310;product=transglycosylase SLT domain-containing protein;protein_id=WP_006248561.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 167635 167711 . + . ID=gene-JYJ20_RS04315;Name=JYJ20_RS04315;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS04315 NZ_JAFIRP010000007.1 tRNAscan-SE tRNA 167635 167711 . + . ID=rna-JYJ20_RS04315;Parent=gene-JYJ20_RS04315;anticodon=(pos:167669..167671);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS04315;product=tRNA-Met NZ_JAFIRP010000007.1 tRNAscan-SE exon 167635 167711 . + . ID=exon-JYJ20_RS04315-1;Parent=rna-JYJ20_RS04315;anticodon=(pos:167669..167671);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS04315;product=tRNA-Met NZ_JAFIRP010000007.1 RefSeq gene 167938 168399 . + . ID=gene-JYJ20_RS04320;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=JYJ20_RS04320 NZ_JAFIRP010000007.1 Protein Homology CDS 167938 168399 . + 0 ID=cds-WP_006248562.1;Parent=gene-JYJ20_RS04320;Dbxref=GenBank:WP_006248562.1;Name=WP_006248562.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018650956.1;locus_tag=JYJ20_RS04320;product=ribosome maturation factor RimP;protein_id=WP_006248562.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 168420 169916 . + . ID=gene-JYJ20_RS04325;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=JYJ20_RS04325 NZ_JAFIRP010000007.1 Protein Homology CDS 168420 169916 . + 0 ID=cds-WP_006248563.1;Parent=gene-JYJ20_RS04325;Dbxref=GenBank:WP_006248563.1;Name=WP_006248563.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005614874.1;locus_tag=JYJ20_RS04325;product=transcription termination factor NusA;protein_id=WP_006248563.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 169934 172483 . + . ID=gene-JYJ20_RS04330;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=JYJ20_RS04330 NZ_JAFIRP010000007.1 Protein Homology CDS 169934 172483 . + 0 ID=cds-WP_245155381.1;Parent=gene-JYJ20_RS04330;Dbxref=GenBank:WP_245155381.1;Name=WP_245155381.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248564.1;locus_tag=JYJ20_RS04330;product=translation initiation factor IF-2;protein_id=WP_245155381.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 172568 172948 . + . ID=gene-JYJ20_RS04335;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=JYJ20_RS04335 NZ_JAFIRP010000007.1 Protein Homology CDS 172568 172948 . + 0 ID=cds-WP_006248565.1;Parent=gene-JYJ20_RS04335;Dbxref=GenBank:WP_006248565.1;Name=WP_006248565.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005824114.1;locus_tag=JYJ20_RS04335;product=30S ribosome-binding factor RbfA;protein_id=WP_006248565.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 172951 173874 . + . ID=gene-JYJ20_RS04340;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=JYJ20_RS04340 NZ_JAFIRP010000007.1 Protein Homology CDS 172951 173874 . + 0 ID=cds-WP_006248566.1;Parent=gene-JYJ20_RS04340;Dbxref=GenBank:WP_006248566.1;Name=WP_006248566.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252320.1;locus_tag=JYJ20_RS04340;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_006248566.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 173877 174971 . + . ID=gene-JYJ20_RS04345;Name=JYJ20_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04345 NZ_JAFIRP010000007.1 Protein Homology CDS 173877 174971 . + 0 ID=cds-WP_044426990.1;Parent=gene-JYJ20_RS04345;Dbxref=GenBank:WP_044426990.1;Name=WP_044426990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252783.1;locus_tag=JYJ20_RS04345;product=lytic murein transglycosylase;protein_id=WP_044426990.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 175009 175533 . - . ID=gene-JYJ20_RS04350;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=JYJ20_RS04350 NZ_JAFIRP010000007.1 Protein Homology CDS 175009 175533 . - 0 ID=cds-WP_006248567.1;Parent=gene-JYJ20_RS04350;Dbxref=GenBank:WP_006248567.1;Name=WP_006248567.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252318.1;locus_tag=JYJ20_RS04350;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_006248567.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 175615 177423 . - . ID=gene-JYJ20_RS04355;Name=JYJ20_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04355 NZ_JAFIRP010000007.1 Protein Homology CDS 175615 177423 . - 0 ID=cds-WP_006248568.1;Parent=gene-JYJ20_RS04355;Dbxref=GenBank:WP_006248568.1;Name=WP_006248568.1;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005618868.1;locus_tag=JYJ20_RS04355;product=DEAD/DEAH box helicase;protein_id=WP_006248568.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 177625 178548 . - . ID=gene-JYJ20_RS04360;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=JYJ20_RS04360 NZ_JAFIRP010000007.1 Protein Homology CDS 177625 178548 . - 0 ID=cds-WP_006248569.1;Parent=gene-JYJ20_RS04360;Dbxref=GenBank:WP_006248569.1;Name=WP_006248569.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248569.1;locus_tag=JYJ20_RS04360;product=lipoprotein NlpI;protein_id=WP_006248569.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 178629 180779 . - . ID=gene-JYJ20_RS04365;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=JYJ20_RS04365 NZ_JAFIRP010000007.1 Protein Homology CDS 178629 180779 . - 0 ID=cds-WP_209026028.1;Parent=gene-JYJ20_RS04365;Dbxref=GenBank:WP_209026028.1;Name=WP_209026028.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248570.1;locus_tag=JYJ20_RS04365;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_209026028.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 181041 182321 . - . ID=gene-JYJ20_RS04370;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=JYJ20_RS04370 NZ_JAFIRP010000007.1 Protein Homology CDS 181041 182321 . - 0 ID=cds-WP_006248571.1;Parent=gene-JYJ20_RS04370;Dbxref=GenBank:WP_006248571.1;Name=WP_006248571.1;Ontology_term=GO:0000160,GO:0006796,GO:0006817,GO:0000155;gbkey=CDS;gene=phoR;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphate-containing compound metabolic process|0006796||IEA,phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248571.1;locus_tag=JYJ20_RS04370;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_006248571.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 182324 183010 . - . ID=gene-JYJ20_RS04375;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=JYJ20_RS04375 NZ_JAFIRP010000007.1 Protein Homology CDS 182324 183010 . - 0 ID=cds-WP_006248572.1;Parent=gene-JYJ20_RS04375;Dbxref=GenBank:WP_006248572.1;Name=WP_006248572.1;Ontology_term=GO:0000160,GO:0006355,GO:0006817,GO:0000156,GO:0003677;gbkey=CDS;gene=phoB;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252315.1;locus_tag=JYJ20_RS04375;product=phosphate regulon transcriptional regulator PhoB;protein_id=WP_006248572.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 183094 183864 . - . ID=gene-JYJ20_RS04380;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=JYJ20_RS04380 NZ_JAFIRP010000007.1 Protein Homology CDS 183094 183864 . - 0 ID=cds-WP_006248573.1;Parent=gene-JYJ20_RS04380;Dbxref=GenBank:WP_006248573.1;Name=WP_006248573.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248573.1;locus_tag=JYJ20_RS04380;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_006248573.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 183874 184722 . - . ID=gene-JYJ20_RS04385;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=JYJ20_RS04385 NZ_JAFIRP010000007.1 Protein Homology CDS 183874 184722 . - 0 ID=cds-WP_006248574.1;Parent=gene-JYJ20_RS04385;Dbxref=GenBank:WP_006248574.1;Name=WP_006248574.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005650601.1;locus_tag=JYJ20_RS04385;product=phosphate ABC transporter permease PstA;protein_id=WP_006248574.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 184719 185678 . - . ID=gene-JYJ20_RS04390;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=JYJ20_RS04390 NZ_JAFIRP010000007.1 Protein Homology CDS 184719 185678 . - 0 ID=cds-WP_006248575.1;Parent=gene-JYJ20_RS04390;Dbxref=GenBank:WP_006248575.1;Name=WP_006248575.1;Ontology_term=GO:0006817,GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252782.1;locus_tag=JYJ20_RS04390;product=phosphate ABC transporter permease subunit PstC;protein_id=WP_006248575.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 185759 186796 . - . ID=gene-JYJ20_RS04395;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=JYJ20_RS04395 NZ_JAFIRP010000007.1 Protein Homology CDS 185759 186796 . - 0 ID=cds-WP_172459174.1;Parent=gene-JYJ20_RS04395;Dbxref=GenBank:WP_172459174.1;Name=WP_172459174.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005756281.1;locus_tag=JYJ20_RS04395;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_172459174.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 186981 189227 . + . ID=gene-JYJ20_RS04400;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=JYJ20_RS04400 NZ_JAFIRP010000007.1 Protein Homology CDS 186981 189227 . + 0 ID=cds-WP_209026029.1;Parent=gene-JYJ20_RS04400;Dbxref=GenBank:WP_209026029.1;Name=WP_209026029.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484645.1;locus_tag=JYJ20_RS04400;product=DNA topoisomerase IV subunit A;protein_id=WP_209026029.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 189298 190650 . - . ID=gene-JYJ20_RS04405;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=JYJ20_RS04405 NZ_JAFIRP010000007.1 Protein Homology CDS 189298 190650 . - 0 ID=cds-WP_209026030.1;Parent=gene-JYJ20_RS04405;Dbxref=GenBank:WP_209026030.1;Name=WP_209026030.1;Ontology_term=GO:0009085,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=L-lysine biosynthetic process|0009085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005604206.1;locus_tag=JYJ20_RS04405;product=lysine-sensitive aspartokinase 3;protein_id=WP_209026030.1;transl_table=11 NZ_JAFIRP010000007.1 cmsearch riboswitch 190748 190940 . - . ID=id-NZ_JAFIRP010000007.1:190748..190940;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAFIRP010000007.1 RefSeq gene 191213 192664 . + . ID=gene-JYJ20_RS04410;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=JYJ20_RS04410 NZ_JAFIRP010000007.1 Protein Homology CDS 191213 192664 . + 0 ID=cds-WP_209026031.1;Parent=gene-JYJ20_RS04410;Dbxref=GenBank:WP_209026031.1;Name=WP_209026031.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252311.1;locus_tag=JYJ20_RS04410;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;protein_id=WP_209026031.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 192728 193057 . - . ID=gene-JYJ20_RS04415;Name=JYJ20_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04415 NZ_JAFIRP010000007.1 Protein Homology CDS 192728 193057 . - 0 ID=cds-WP_209026032.1;Parent=gene-JYJ20_RS04415;Dbxref=GenBank:WP_209026032.1;Name=WP_209026032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252310.1;locus_tag=JYJ20_RS04415;product=DUF496 family protein;protein_id=WP_209026032.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 193253 194755 . + . ID=gene-JYJ20_RS04420;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=JYJ20_RS04420 NZ_JAFIRP010000007.1 Protein Homology CDS 193253 194755 . + 0 ID=cds-WP_006252309.1;Parent=gene-JYJ20_RS04420;Dbxref=GenBank:WP_006252309.1;Name=WP_006252309.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252309.1;locus_tag=JYJ20_RS04420;product=exopolyphosphatase;protein_id=WP_006252309.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 195002 195466 . + . ID=gene-JYJ20_RS04425;Name=nanQ;gbkey=Gene;gene=nanQ;gene_biotype=protein_coding;locus_tag=JYJ20_RS04425 NZ_JAFIRP010000007.1 Protein Homology CDS 195002 195466 . + 0 ID=cds-WP_006248605.1;Parent=gene-JYJ20_RS04425;Dbxref=GenBank:WP_006248605.1;Name=WP_006248605.1;Ontology_term=GO:0006974;gbkey=CDS;gene=nanQ;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014991447.1;locus_tag=JYJ20_RS04425;product=N-acetylneuraminate anomerase;protein_id=WP_006248605.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 195476 196345 . + . ID=gene-JYJ20_RS04430;Name=JYJ20_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04430 NZ_JAFIRP010000007.1 Protein Homology CDS 195476 196345 . + 0 ID=cds-WP_006248604.1;Parent=gene-JYJ20_RS04430;Dbxref=GenBank:WP_006248604.1;Name=WP_006248604.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248604.1;locus_tag=JYJ20_RS04430;product=MurR/RpiR family transcriptional regulator;protein_id=WP_006248604.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 196551 198194 . - . ID=gene-JYJ20_RS04435;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=JYJ20_RS04435 NZ_JAFIRP010000007.1 Protein Homology CDS 196551 198194 . - 0 ID=cds-WP_126302009.1;Parent=gene-JYJ20_RS04435;Dbxref=GenBank:WP_126302009.1;Name=WP_126302009.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005597203.1;locus_tag=JYJ20_RS04435;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_126302009.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 198231 198593 . - . ID=gene-JYJ20_RS04440;Name=JYJ20_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04440 NZ_JAFIRP010000007.1 Protein Homology CDS 198231 198593 . - 0 ID=cds-WP_209026033.1;Parent=gene-JYJ20_RS04440;Dbxref=GenBank:WP_209026033.1;Name=WP_209026033.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248602.1;locus_tag=JYJ20_RS04440;product=diacylglycerol kinase;protein_id=WP_209026033.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 198847 200061 . + . ID=gene-JYJ20_RS04445;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=JYJ20_RS04445 NZ_JAFIRP010000007.1 Protein Homology CDS 198847 200061 . + 0 ID=cds-WP_040080813.1;Parent=gene-JYJ20_RS04445;Dbxref=GenBank:WP_040080813.1;Name=WP_040080813.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250639.1;locus_tag=JYJ20_RS04445;product=serine/threonine transporter SstT;protein_id=WP_040080813.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 200203 202485 . + . ID=gene-JYJ20_RS04450;Name=JYJ20_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04450 NZ_JAFIRP010000007.1 Protein Homology CDS 200203 202485 . + 0 ID=cds-WP_031200289.1;Parent=gene-JYJ20_RS04450;Dbxref=GenBank:WP_031200289.1;Name=WP_031200289.1;Ontology_term=GO:0009290,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250638.1;locus_tag=JYJ20_RS04450;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_031200289.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 202498 202806 . + . ID=gene-JYJ20_RS12100;Name=JYJ20_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS12100 NZ_JAFIRP010000007.1 Protein Homology CDS 202498 202806 . + 0 ID=cds-WP_015587066.1;Parent=gene-JYJ20_RS12100;Dbxref=GenBank:WP_015587066.1;Name=WP_015587066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252583.1;locus_tag=JYJ20_RS12100;product=transposase;protein_id=WP_015587066.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 203063 204148 . - . ID=gene-JYJ20_RS04460;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=JYJ20_RS04460 NZ_JAFIRP010000007.1 Protein Homology CDS 203063 204148 . - 0 ID=cds-WP_209026034.1;Parent=gene-JYJ20_RS04460;Dbxref=GenBank:WP_209026034.1;Name=WP_209026034.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005601009.1;locus_tag=JYJ20_RS04460;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_209026034.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 204282 206078 . + . ID=gene-JYJ20_RS04465;Name=JYJ20_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04465 NZ_JAFIRP010000007.1 Protein Homology CDS 204282 206078 . + 0 ID=cds-WP_241768568.1;Parent=gene-JYJ20_RS04465;Dbxref=GenBank:WP_241768568.1;Name=WP_241768568.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250636.1;locus_tag=JYJ20_RS04465;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_241768568.1;transl_table=11 NZ_JAFIRP010000007.1 RefSeq gene 206130 215726 . + . ID=gene-JYJ20_RS04470;Name=JYJ20_RS04470;end_range=215726,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04470;partial=true NZ_JAFIRP010000007.1 Protein Homology CDS 206130 215726 . + 0 ID=cds-WP_209026035.1;Parent=gene-JYJ20_RS04470;Dbxref=GenBank:WP_209026035.1;Name=WP_209026035.1;end_range=215726,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484218.1;locus_tag=JYJ20_RS04470;partial=true;product=two-partner secretion domain-containing protein;protein_id=WP_209026035.1;transl_table=11 ##sequence-region NZ_JAFIRP010000008.1 1 10374 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000008.1 RefSeq region 1 10374 . + . ID=NZ_JAFIRP010000008.1:1..10374;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000008.1 RefSeq gene 178 567 . - . ID=gene-JYJ20_RS04475;Name=JYJ20_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04475 NZ_JAFIRP010000008.1 Protein Homology CDS 178 567 . - 0 ID=cds-WP_015484665.1;Parent=gene-JYJ20_RS04475;Dbxref=GenBank:WP_015484665.1;Name=WP_015484665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484665.1;locus_tag=JYJ20_RS04475;product=hypothetical protein;protein_id=WP_015484665.1;transl_table=11 NZ_JAFIRP010000008.1 RefSeq pseudogene 567 1445 . - . ID=gene-JYJ20_RS04480;Name=JYJ20_RS04480;end_range=1445,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS04480;partial=true;pseudo=true NZ_JAFIRP010000008.1 Protein Homology CDS 567 1445 . - 0 ID=cds-JYJ20_RS04480;Parent=gene-JYJ20_RS04480;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=1445,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945422.1;locus_tag=JYJ20_RS04480;partial=true;product=IS1595 family transposase;pseudo=true;transl_table=11 NZ_JAFIRP010000008.1 RefSeq gene 1578 2129 . + . ID=gene-JYJ20_RS04485;Name=JYJ20_RS04485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04485 NZ_JAFIRP010000008.1 Protein Homology CDS 1578 2129 . + 0 ID=cds-WP_041447897.1;Parent=gene-JYJ20_RS04485;Dbxref=GenBank:WP_041447897.1;Name=WP_041447897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005822572.1;locus_tag=JYJ20_RS04485;product=hypothetical protein;protein_id=WP_041447897.1;transl_table=11 NZ_JAFIRP010000008.1 RefSeq gene 2147 2566 . + . ID=gene-JYJ20_RS04490;Name=JYJ20_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04490 NZ_JAFIRP010000008.1 Protein Homology CDS 2147 2566 . + 0 ID=cds-WP_041447898.1;Parent=gene-JYJ20_RS04490;Dbxref=GenBank:WP_041447898.1;Name=WP_041447898.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042611.5;locus_tag=JYJ20_RS04490;product=DUF6792 domain-containing protein;protein_id=WP_041447898.1;transl_table=11 NZ_JAFIRP010000008.1 RefSeq gene 2663 3226 . + . ID=gene-JYJ20_RS04495;Name=JYJ20_RS04495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04495 NZ_JAFIRP010000008.1 Protein Homology CDS 2663 3226 . + 0 ID=cds-WP_226318353.1;Parent=gene-JYJ20_RS04495;Dbxref=GenBank:WP_226318353.1;Name=WP_226318353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005822572.1;locus_tag=JYJ20_RS04495;product=hypothetical protein;protein_id=WP_226318353.1;transl_table=11 NZ_JAFIRP010000008.1 RefSeq gene 3239 10045 . + . ID=gene-JYJ20_RS04500;Name=JYJ20_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04500 NZ_JAFIRP010000008.1 Protein Homology CDS 3239 10045 . + 0 ID=cds-WP_209026037.1;Parent=gene-JYJ20_RS04500;Dbxref=GenBank:WP_209026037.1;Name=WP_209026037.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484671.1;locus_tag=JYJ20_RS04500;product=S8 family serine peptidase;protein_id=WP_209026037.1;transl_table=11 NZ_JAFIRP010000008.1 RefSeq gene 10124 10372 . + . ID=gene-JYJ20_RS04505;Name=JYJ20_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04505 NZ_JAFIRP010000008.1 Protein Homology CDS 10124 10372 . + 0 ID=cds-WP_041447899.1;Parent=gene-JYJ20_RS04505;Dbxref=GenBank:WP_041447899.1;Name=WP_041447899.1;Ontology_term=GO:0006508,GO:0005524,GO:0008233,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF015377.7;locus_tag=JYJ20_RS04505;product=cysteine peptidase family C39 domain-containing protein;protein_id=WP_041447899.1;transl_table=11 ##sequence-region NZ_JAFIRP010000009.1 1 110244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=75985 NZ_JAFIRP010000009.1 RefSeq region 1 110244 . + . ID=NZ_JAFIRP010000009.1:1..110244;Dbxref=taxon:75985;collected-by=Bkiri Dounia;collection-date=2019-12;country=Morocco: Sidi Yahia Zaer;gbkey=Src;genome=genomic;isolation-source=lung;lat-lon=33.8279 N 6.9035 W;mol_type=genomic DNA;nat-host=Ovis aries;strain=MHA.Sh.MOR19 NZ_JAFIRP010000009.1 RefSeq gene 138 1853 . - . ID=gene-JYJ20_RS04510;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=JYJ20_RS04510 NZ_JAFIRP010000009.1 Protein Homology CDS 138 1853 . - 0 ID=cds-WP_209026038.1;Parent=gene-JYJ20_RS04510;Dbxref=GenBank:WP_209026038.1;Name=WP_209026038.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248268.1;locus_tag=JYJ20_RS04510;product=proline--tRNA ligase;protein_id=WP_209026038.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 2017 2163 . - . ID=gene-JYJ20_RS04515;Name=JYJ20_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04515 NZ_JAFIRP010000009.1 Protein Homology CDS 2017 2163 . - 0 ID=cds-WP_230269068.1;Parent=gene-JYJ20_RS04515;Dbxref=GenBank:WP_230269068.1;Name=WP_230269068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250493.1;locus_tag=JYJ20_RS04515;product=hypothetical protein;protein_id=WP_230269068.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 2252 4135 . - . ID=gene-JYJ20_RS04520;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=JYJ20_RS04520 NZ_JAFIRP010000009.1 Protein Homology CDS 2252 4135 . - 0 ID=cds-WP_006248270.1;Parent=gene-JYJ20_RS04520;Dbxref=GenBank:WP_006248270.1;Name=WP_006248270.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874843.1;locus_tag=JYJ20_RS04520;product=molecular chaperone HtpG;protein_id=WP_006248270.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 4299 4586 . + . ID=gene-JYJ20_RS04525;Name=JYJ20_RS04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04525 NZ_JAFIRP010000009.1 Protein Homology CDS 4299 4586 . + 0 ID=cds-WP_006248272.1;Parent=gene-JYJ20_RS04525;Dbxref=GenBank:WP_006248272.1;Name=WP_006248272.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599447.1;locus_tag=JYJ20_RS04525;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_006248272.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 4586 5014 . + . ID=gene-JYJ20_RS04530;Name=JYJ20_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04530 NZ_JAFIRP010000009.1 Protein Homology CDS 4586 5014 . + 0 ID=cds-WP_006250491.1;Parent=gene-JYJ20_RS04530;Dbxref=GenBank:WP_006250491.1;Name=WP_006250491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250491.1;locus_tag=JYJ20_RS04530;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_006250491.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 5018 7099 . + . ID=gene-JYJ20_RS04535;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=JYJ20_RS04535 NZ_JAFIRP010000009.1 Protein Homology CDS 5018 7099 . + 0 ID=cds-WP_006250490.1;Parent=gene-JYJ20_RS04535;Dbxref=GenBank:WP_006250490.1;Name=WP_006250490.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009875323.1;locus_tag=JYJ20_RS04535;product=ATP-dependent DNA helicase RecG;protein_id=WP_006250490.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 7121 8053 . - . ID=gene-JYJ20_RS04540;Name=uriH;gbkey=Gene;gene=uriH;gene_biotype=protein_coding;locus_tag=JYJ20_RS04540 NZ_JAFIRP010000009.1 Protein Homology CDS 7121 8053 . - 0 ID=cds-WP_015484792.1;Parent=gene-JYJ20_RS04540;Dbxref=GenBank:WP_015484792.1;Name=WP_015484792.1;Ontology_term=GO:0016799;gbkey=CDS;gene=uriH;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250489.1;locus_tag=JYJ20_RS04540;product=uridine-preferring nucleoside hydrolase UriH;protein_id=WP_015484792.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 8106 9758 . - . ID=gene-JYJ20_RS04545;Name=JYJ20_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04545 NZ_JAFIRP010000009.1 Protein Homology CDS 8106 9758 . - 0 ID=cds-WP_209026039.1;Parent=gene-JYJ20_RS04545;Dbxref=GenBank:WP_209026039.1;Name=WP_209026039.1;Ontology_term=GO:0016868;gbkey=CDS;go_function=intramolecular phosphotransferase activity|0016868||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250488.1;locus_tag=JYJ20_RS04545;product=phospho-sugar mutase;protein_id=WP_209026039.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 9910 10971 . - . ID=gene-JYJ20_RS04550;Name=JYJ20_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04550 NZ_JAFIRP010000009.1 Protein Homology CDS 9910 10971 . - 0 ID=cds-WP_021280249.1;Parent=gene-JYJ20_RS04550;Dbxref=GenBank:WP_021280249.1;Name=WP_021280249.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484794.1;locus_tag=JYJ20_RS04550;product=ParA family protein;protein_id=WP_021280249.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 11052 12284 . - . ID=gene-JYJ20_RS04555;Name=JYJ20_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04555 NZ_JAFIRP010000009.1 Protein Homology CDS 11052 12284 . - 0 ID=cds-WP_209026040.1;Parent=gene-JYJ20_RS04555;Dbxref=GenBank:WP_209026040.1;Name=WP_209026040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250486.1;locus_tag=JYJ20_RS04555;product=capsule biosynthesis protein;protein_id=WP_209026040.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 12307 14394 . - . ID=gene-JYJ20_RS04560;Name=JYJ20_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04560 NZ_JAFIRP010000009.1 Protein Homology CDS 12307 14394 . - 0 ID=cds-WP_209026041.1;Parent=gene-JYJ20_RS04560;Dbxref=GenBank:WP_209026041.1;Name=WP_209026041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006250485.1;locus_tag=JYJ20_RS04560;product=capsular polysaccharide biosynthesis protein;protein_id=WP_209026041.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 14925 16046 . - . ID=gene-JYJ20_RS04565;Name=JYJ20_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04565 NZ_JAFIRP010000009.1 GeneMarkS-2+ CDS 14925 16046 . - 0 ID=cds-WP_209026042.1;Parent=gene-JYJ20_RS04565;Dbxref=GenBank:WP_209026042.1;Name=WP_209026042.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS04565;product=SGNH/GDSL hydrolase family protein;protein_id=WP_209026042.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 16039 18708 . - . ID=gene-JYJ20_RS04570;Name=JYJ20_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04570 NZ_JAFIRP010000009.1 Protein Homology CDS 16039 18708 . - 0 ID=cds-WP_209026043.1;Parent=gene-JYJ20_RS04570;Dbxref=GenBank:WP_209026043.1;Name=WP_209026043.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: protein motif:HMM:NF016357.7;locus_tag=JYJ20_RS04570;product=CDP-glycerol:glycerophosphate glycerophosphotransferase;protein_id=WP_209026043.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 18701 19825 . - . ID=gene-JYJ20_RS04575;Name=JYJ20_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04575 NZ_JAFIRP010000009.1 Protein Homology CDS 18701 19825 . - 0 ID=cds-WP_209026044.1;Parent=gene-JYJ20_RS04575;Dbxref=GenBank:WP_209026044.1;Name=WP_209026044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005605524.1;locus_tag=JYJ20_RS04575;product=stealth family protein;protein_id=WP_209026044.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 20305 21480 . + . ID=gene-JYJ20_RS04580;Name=JYJ20_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04580 NZ_JAFIRP010000009.1 Protein Homology CDS 20305 21480 . + 0 ID=cds-WP_209026045.1;Parent=gene-JYJ20_RS04580;Dbxref=GenBank:WP_209026045.1;Name=WP_209026045.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251416.1;locus_tag=JYJ20_RS04580;product=polysaccharide biosynthesis/export family protein;protein_id=WP_209026045.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 21552 22655 . + . ID=gene-JYJ20_RS04585;Name=JYJ20_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04585 NZ_JAFIRP010000009.1 Protein Homology CDS 21552 22655 . + 0 ID=cds-WP_006251415.1;Parent=gene-JYJ20_RS04585;Dbxref=GenBank:WP_006251415.1;Name=WP_006251415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248286.1;locus_tag=JYJ20_RS04585;product=capsule polysaccharide transporter;protein_id=WP_006251415.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 22655 23452 . + . ID=gene-JYJ20_RS04590;Name=JYJ20_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04590 NZ_JAFIRP010000009.1 Protein Homology CDS 22655 23452 . + 0 ID=cds-WP_021280132.1;Parent=gene-JYJ20_RS04590;Dbxref=GenBank:WP_021280132.1;Name=WP_021280132.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005598930.1;locus_tag=JYJ20_RS04590;product=ABC transporter permease;protein_id=WP_021280132.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 23449 24096 . + . ID=gene-JYJ20_RS04595;Name=JYJ20_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04595 NZ_JAFIRP010000009.1 Protein Homology CDS 23449 24096 . + 0 ID=cds-WP_021280131.1;Parent=gene-JYJ20_RS04595;Dbxref=GenBank:WP_021280131.1;Name=WP_021280131.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253527.1;locus_tag=JYJ20_RS04595;product=ABC transporter ATP-binding protein;protein_id=WP_021280131.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 24174 24803 . - . ID=gene-JYJ20_RS04600;Name=JYJ20_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04600 NZ_JAFIRP010000009.1 Protein Homology CDS 24174 24803 . - 0 ID=cds-WP_209026046.1;Parent=gene-JYJ20_RS04600;Dbxref=GenBank:WP_209026046.1;Name=WP_209026046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251412.1;locus_tag=JYJ20_RS04600;product=tellurite resistance TerB family protein;protein_id=WP_209026046.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 24875 25348 . - . ID=gene-JYJ20_RS04605;Name=JYJ20_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04605 NZ_JAFIRP010000009.1 Protein Homology CDS 24875 25348 . - 0 ID=cds-WP_209026047.1;Parent=gene-JYJ20_RS04605;Dbxref=GenBank:WP_209026047.1;Name=WP_209026047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248290.1;locus_tag=JYJ20_RS04605;product=YchJ family protein;protein_id=WP_209026047.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 25799 27691 . + . ID=gene-JYJ20_RS04610;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=JYJ20_RS04610 NZ_JAFIRP010000009.1 Protein Homology CDS 25799 27691 . + 0 ID=cds-WP_209026048.1;Parent=gene-JYJ20_RS04610;Dbxref=GenBank:WP_209026048.1;Name=WP_209026048.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651460.1;locus_tag=JYJ20_RS04610;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_209026048.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 27786 28010 . + . ID=gene-JYJ20_RS04615;Name=JYJ20_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04615 NZ_JAFIRP010000009.1 Protein Homology CDS 27786 28010 . + 0 ID=cds-WP_209026049.1;Parent=gene-JYJ20_RS04615;Dbxref=GenBank:WP_209026049.1;Name=WP_209026049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248292.1;locus_tag=JYJ20_RS04615;product=hypothetical protein;protein_id=WP_209026049.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 28023 28637 . + . ID=gene-JYJ20_RS04620;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=JYJ20_RS04620 NZ_JAFIRP010000009.1 Protein Homology CDS 28023 28637 . + 0 ID=cds-WP_006251410.1;Parent=gene-JYJ20_RS04620;Dbxref=GenBank:WP_006251410.1;Name=WP_006251410.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251410.1;locus_tag=JYJ20_RS04620;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_006251410.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 28905 30389 . + . ID=gene-JYJ20_RS04625;Name=JYJ20_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04625 NZ_JAFIRP010000009.1 Protein Homology CDS 28905 30389 . + 0 ID=cds-WP_209026050.1;Parent=gene-JYJ20_RS04625;Dbxref=GenBank:WP_209026050.1;Name=WP_209026050.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248294.1;locus_tag=JYJ20_RS04625;product=MFS transporter;protein_id=WP_209026050.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 30412 31494 . + . ID=gene-JYJ20_RS04630;Name=JYJ20_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04630 NZ_JAFIRP010000009.1 Protein Homology CDS 30412 31494 . + 0 ID=cds-WP_209026051.1;Parent=gene-JYJ20_RS04630;Dbxref=GenBank:WP_209026051.1;Name=WP_209026051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251406.1;locus_tag=JYJ20_RS04630;product=glycoside hydrolase family 43 protein;protein_id=WP_209026051.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 31467 32087 . + . ID=gene-JYJ20_RS04635;Name=JYJ20_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04635 NZ_JAFIRP010000009.1 Protein Homology CDS 31467 32087 . + 0 ID=cds-WP_015586969.1;Parent=gene-JYJ20_RS04635;Dbxref=GenBank:WP_015586969.1;Name=WP_015586969.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036826.7;locus_tag=JYJ20_RS04635;product=beta-xylosidase family glycoside hydrolase;protein_id=WP_015586969.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 32106 33086 . + . ID=gene-JYJ20_RS04640;Name=JYJ20_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04640 NZ_JAFIRP010000009.1 Protein Homology CDS 32106 33086 . + 0 ID=cds-WP_006251404.1;Parent=gene-JYJ20_RS04640;Dbxref=GenBank:WP_006251404.1;Name=WP_006251404.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248295.1;locus_tag=JYJ20_RS04640;product=aldo/keto reductase;protein_id=WP_006251404.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 33148 34488 . - . ID=gene-JYJ20_RS04645;Name=pgtP;gbkey=Gene;gene=pgtP;gene_biotype=protein_coding;locus_tag=JYJ20_RS04645 NZ_JAFIRP010000009.1 Protein Homology CDS 33148 34488 . - 0 ID=cds-WP_209026052.1;Parent=gene-JYJ20_RS04645;Dbxref=GenBank:WP_209026052.1;Name=WP_209026052.1;gbkey=CDS;gene=pgtP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251403.1;locus_tag=JYJ20_RS04645;product=phosphoglycerate transporter protein PgtP;protein_id=WP_209026052.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 34678 35751 . - . ID=gene-JYJ20_RS04650;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=JYJ20_RS04650 NZ_JAFIRP010000009.1 Protein Homology CDS 34678 35751 . - 0 ID=cds-WP_006251402.1;Parent=gene-JYJ20_RS04650;Dbxref=GenBank:WP_006251402.1;Name=WP_006251402.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251402.1;locus_tag=JYJ20_RS04650;product=glycerophosphodiester phosphodiesterase;protein_id=WP_006251402.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 35821 37266 . - . ID=gene-JYJ20_RS04655;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=JYJ20_RS04655 NZ_JAFIRP010000009.1 Protein Homology CDS 35821 37266 . - 0 ID=cds-WP_015484507.1;Parent=gene-JYJ20_RS04655;Dbxref=GenBank:WP_015484507.1;Name=WP_015484507.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005596379.1;locus_tag=JYJ20_RS04655;product=glycerol-3-phosphate transporter;protein_id=WP_015484507.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 37624 39219 . + . ID=gene-JYJ20_RS04660;Name=JYJ20_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04660 NZ_JAFIRP010000009.1 Protein Homology CDS 37624 39219 . + 0 ID=cds-WP_006251400.1;Parent=gene-JYJ20_RS04660;Dbxref=GenBank:WP_006251400.1;Name=WP_006251400.1;Ontology_term=GO:0006072,GO:0004368,GO:0071949,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FAD binding|0071949||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006252543.1;locus_tag=JYJ20_RS04660;product=glycerol-3-phosphate dehydrogenase/oxidase;protein_id=WP_006251400.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 39306 39590 . - . ID=gene-JYJ20_RS04665;Name=JYJ20_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04665 NZ_JAFIRP010000009.1 Protein Homology CDS 39306 39590 . - 0 ID=cds-WP_006249007.1;Parent=gene-JYJ20_RS04665;Dbxref=GenBank:WP_006249007.1;Name=WP_006249007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249007.1;locus_tag=JYJ20_RS04665;product=hypothetical protein;protein_id=WP_006249007.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 39592 39987 . - . ID=gene-JYJ20_RS04670;Name=JYJ20_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04670 NZ_JAFIRP010000009.1 Protein Homology CDS 39592 39987 . - 0 ID=cds-WP_134916483.1;Parent=gene-JYJ20_RS04670;Dbxref=GenBank:WP_134916483.1;Name=WP_134916483.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249006.1;locus_tag=JYJ20_RS04670;product=phage holin family protein;protein_id=WP_134916483.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 40059 40370 . - . ID=gene-JYJ20_RS04675;Name=JYJ20_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04675 NZ_JAFIRP010000009.1 Protein Homology CDS 40059 40370 . - 0 ID=cds-WP_006249005.1;Parent=gene-JYJ20_RS04675;Dbxref=GenBank:WP_006249005.1;Name=WP_006249005.1;Ontology_term=GO:0043022,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249005.1;locus_tag=JYJ20_RS04675;product=ElaB/YgaM/YqjD family protein;protein_id=WP_006249005.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 40580 42049 . - . ID=gene-JYJ20_RS04680;Name=JYJ20_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04680 NZ_JAFIRP010000009.1 Protein Homology CDS 40580 42049 . - 0 ID=cds-WP_006251398.1;Parent=gene-JYJ20_RS04680;Dbxref=GenBank:WP_006251398.1;Name=WP_006251398.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005610664.1;locus_tag=JYJ20_RS04680;product=FGGY-family carbohydrate kinase;protein_id=WP_006251398.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 42121 43011 . - . ID=gene-JYJ20_RS04685;Name=JYJ20_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04685 NZ_JAFIRP010000009.1 Protein Homology CDS 42121 43011 . - 0 ID=cds-WP_006249003.1;Parent=gene-JYJ20_RS04685;Dbxref=GenBank:WP_006249003.1;Name=WP_006249003.1;Ontology_term=GO:0005515,GO:0016787,GO:0046872;gbkey=CDS;go_function=protein binding|0005515||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249003.1;locus_tag=JYJ20_RS04685;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_006249003.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 43116 44225 . - . ID=gene-JYJ20_RS04690;Name=JYJ20_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04690 NZ_JAFIRP010000009.1 Protein Homology CDS 43116 44225 . - 0 ID=cds-WP_006249002.1;Parent=gene-JYJ20_RS04690;Dbxref=GenBank:WP_006249002.1;Name=WP_006249002.1;Ontology_term=GO:0055085,GO:0022857,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005757420.1;locus_tag=JYJ20_RS04690;product=ABC transporter substrate-binding protein;protein_id=WP_006249002.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 44238 45284 . - . ID=gene-JYJ20_RS04695;Name=JYJ20_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04695 NZ_JAFIRP010000009.1 Protein Homology CDS 44238 45284 . - 0 ID=cds-WP_015484508.1;Parent=gene-JYJ20_RS04695;Dbxref=GenBank:WP_015484508.1;Name=WP_015484508.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249001.1;locus_tag=JYJ20_RS04695;product=ABC transporter permease;protein_id=WP_015484508.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 45479 46984 . - . ID=gene-JYJ20_RS04700;Name=JYJ20_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04700 NZ_JAFIRP010000009.1 Protein Homology CDS 45479 46984 . - 0 ID=cds-WP_041447878.1;Parent=gene-JYJ20_RS04700;Dbxref=GenBank:WP_041447878.1;Name=WP_041447878.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249000.1;locus_tag=JYJ20_RS04700;product=sugar ABC transporter ATP-binding protein;protein_id=WP_041447878.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 47094 48077 . - . ID=gene-JYJ20_RS04705;Name=JYJ20_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04705 NZ_JAFIRP010000009.1 Protein Homology CDS 47094 48077 . - 0 ID=cds-WP_015484510.1;Parent=gene-JYJ20_RS04705;Dbxref=GenBank:WP_015484510.1;Name=WP_015484510.1;Ontology_term=GO:0055085,GO:0031317;gbkey=CDS;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248999.1;locus_tag=JYJ20_RS04705;product=TRAP transporter substrate-binding protein;protein_id=WP_015484510.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 48151 49137 . - . ID=gene-JYJ20_RS04710;Name=JYJ20_RS04710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04710 NZ_JAFIRP010000009.1 Protein Homology CDS 48151 49137 . - 0 ID=cds-WP_015484511.1;Parent=gene-JYJ20_RS04710;Dbxref=GenBank:WP_015484511.1;Name=WP_015484511.1;Ontology_term=GO:0055085,GO:0031317;gbkey=CDS;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484511.1;locus_tag=JYJ20_RS04710;product=TRAP transporter substrate-binding protein;protein_id=WP_015484511.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 49240 50517 . - . ID=gene-JYJ20_RS04715;Name=JYJ20_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04715 NZ_JAFIRP010000009.1 Protein Homology CDS 49240 50517 . - 0 ID=cds-WP_006251394.1;Parent=gene-JYJ20_RS04715;Dbxref=GenBank:WP_006251394.1;Name=WP_006251394.1;Ontology_term=GO:0015740,GO:0015556,GO:0016020,GO:0031317;gbkey=CDS;go_component=membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251394.1;locus_tag=JYJ20_RS04715;product=TRAP transporter large permease subunit;protein_id=WP_006251394.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 50518 50997 . - . ID=gene-JYJ20_RS04720;Name=JYJ20_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04720 NZ_JAFIRP010000009.1 Protein Homology CDS 50518 50997 . - 0 ID=cds-WP_006248996.1;Parent=gene-JYJ20_RS04720;Dbxref=GenBank:WP_006248996.1;Name=WP_006248996.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248996.1;locus_tag=JYJ20_RS04720;product=TRAP transporter small permease;protein_id=WP_006248996.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 50994 51467 . - . ID=gene-JYJ20_RS04725;Name=JYJ20_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04725 NZ_JAFIRP010000009.1 Protein Homology CDS 50994 51467 . - 0 ID=cds-WP_015484512.1;Parent=gene-JYJ20_RS04725;Dbxref=GenBank:WP_015484512.1;Name=WP_015484512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251393.1;locus_tag=JYJ20_RS04725;product=NanQ anomerase/TabA/YiaL family protein;protein_id=WP_015484512.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 51592 52590 . - . ID=gene-JYJ20_RS04730;Name=yiaK;gbkey=Gene;gene=yiaK;gene_biotype=protein_coding;locus_tag=JYJ20_RS04730 NZ_JAFIRP010000009.1 Protein Homology CDS 51592 52590 . - 0 ID=cds-WP_031200631.1;Parent=gene-JYJ20_RS04730;Dbxref=GenBank:WP_031200631.1;Name=WP_031200631.1;Ontology_term=GO:0047559,GO:0070403;gbkey=CDS;gene=yiaK;go_function=3-dehydro-L-gulonate 2-dehydrogenase activity|0047559||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005757429.1;locus_tag=JYJ20_RS04730;product=3-dehydro-L-gulonate 2-dehydrogenase;protein_id=WP_031200631.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 52751 53584 . + . ID=gene-JYJ20_RS04735;Name=JYJ20_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04735 NZ_JAFIRP010000009.1 Protein Homology CDS 52751 53584 . + 0 ID=cds-WP_015484514.1;Parent=gene-JYJ20_RS04735;Dbxref=GenBank:WP_015484514.1;Name=WP_015484514.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023190.7;locus_tag=JYJ20_RS04735;product=L-arabinose isomerase family protein;protein_id=WP_015484514.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 53659 56865 . - . ID=gene-JYJ20_RS04740;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=JYJ20_RS04740 NZ_JAFIRP010000009.1 Protein Homology CDS 53659 56865 . - 0 ID=cds-WP_015484515.1;Parent=gene-JYJ20_RS04740;Dbxref=GenBank:WP_015484515.1;Name=WP_015484515.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484515.1;locus_tag=JYJ20_RS04740;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_015484515.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 56968 58101 . - . ID=gene-JYJ20_RS04745;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=JYJ20_RS04745 NZ_JAFIRP010000009.1 Protein Homology CDS 56968 58101 . - 0 ID=cds-WP_006248992.1;Parent=gene-JYJ20_RS04745;Dbxref=GenBank:WP_006248992.1;Name=WP_006248992.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,L-glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248992.1;locus_tag=JYJ20_RS04745;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_006248992.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 58569 58952 . + . ID=gene-JYJ20_RS04750;Name=JYJ20_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04750 NZ_JAFIRP010000009.1 Protein Homology CDS 58569 58952 . + 0 ID=cds-WP_006248990.1;Parent=gene-JYJ20_RS04750;Dbxref=GenBank:WP_006248990.1;Name=WP_006248990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248990.1;locus_tag=JYJ20_RS04750;product=ATP synthase subunit I;protein_id=WP_006248990.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 58975 59763 . + . ID=gene-JYJ20_RS04755;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=JYJ20_RS04755 NZ_JAFIRP010000009.1 Protein Homology CDS 58975 59763 . + 0 ID=cds-WP_006248989.1;Parent=gene-JYJ20_RS04755;Dbxref=GenBank:WP_006248989.1;Name=WP_006248989.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005713638.1;locus_tag=JYJ20_RS04755;product=F0F1 ATP synthase subunit A;protein_id=WP_006248989.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 59881 60135 . + . ID=gene-JYJ20_RS04760;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=JYJ20_RS04760 NZ_JAFIRP010000009.1 Protein Homology CDS 59881 60135 . + 0 ID=cds-WP_005599073.1;Parent=gene-JYJ20_RS04760;Dbxref=GenBank:WP_005599073.1;Name=WP_005599073.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599073.1;locus_tag=JYJ20_RS04760;product=F0F1 ATP synthase subunit C;protein_id=WP_005599073.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 60196 60666 . + . ID=gene-JYJ20_RS04765;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=JYJ20_RS04765 NZ_JAFIRP010000009.1 Protein Homology CDS 60196 60666 . + 0 ID=cds-WP_021279958.1;Parent=gene-JYJ20_RS04765;Dbxref=GenBank:WP_021279958.1;Name=WP_021279958.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874987.1;locus_tag=JYJ20_RS04765;product=F0F1 ATP synthase subunit B;protein_id=WP_021279958.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 60680 61213 . + . ID=gene-JYJ20_RS04770;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=JYJ20_RS04770 NZ_JAFIRP010000009.1 Protein Homology CDS 60680 61213 . + 0 ID=cds-WP_044427143.1;Parent=gene-JYJ20_RS04770;Dbxref=GenBank:WP_044427143.1;Name=WP_044427143.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015674172.1;locus_tag=JYJ20_RS04770;product=F0F1 ATP synthase subunit delta;protein_id=WP_044427143.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 61226 62767 . + . ID=gene-JYJ20_RS04775;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=JYJ20_RS04775 NZ_JAFIRP010000009.1 Protein Homology CDS 61226 62767 . + 0 ID=cds-WP_006248986.1;Parent=gene-JYJ20_RS04775;Dbxref=GenBank:WP_006248986.1;Name=WP_006248986.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010944086.1;locus_tag=JYJ20_RS04775;product=F0F1 ATP synthase subunit alpha;protein_id=WP_006248986.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 62793 63659 . + . ID=gene-JYJ20_RS04780;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=JYJ20_RS04780 NZ_JAFIRP010000009.1 Protein Homology CDS 62793 63659 . + 0 ID=cds-WP_044427145.1;Parent=gene-JYJ20_RS04780;Dbxref=GenBank:WP_044427145.1;Name=WP_044427145.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011201492.1;locus_tag=JYJ20_RS04780;product=F0F1 ATP synthase subunit gamma;protein_id=WP_044427145.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 63680 65053 . + . ID=gene-JYJ20_RS04785;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=JYJ20_RS04785 NZ_JAFIRP010000009.1 Protein Homology CDS 63680 65053 . + 0 ID=cds-WP_134916484.1;Parent=gene-JYJ20_RS04785;Dbxref=GenBank:WP_134916484.1;Name=WP_134916484.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011978979.1;locus_tag=JYJ20_RS04785;product=F0F1 ATP synthase subunit beta;protein_id=WP_134916484.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 65090 65509 . + . ID=gene-JYJ20_RS04790;Name=JYJ20_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04790 NZ_JAFIRP010000009.1 Protein Homology CDS 65090 65509 . + 0 ID=cds-WP_006248983.1;Parent=gene-JYJ20_RS04790;Dbxref=GenBank:WP_006248983.1;Name=WP_006248983.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651450.1;locus_tag=JYJ20_RS04790;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_006248983.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 65633 66625 . - . ID=gene-JYJ20_RS04795;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=JYJ20_RS04795 NZ_JAFIRP010000009.1 Protein Homology CDS 65633 66625 . - 0 ID=cds-WP_006251384.1;Parent=gene-JYJ20_RS04795;Dbxref=GenBank:WP_006251384.1;Name=WP_006251384.1;Ontology_term=GO:0070981,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015701738.1;locus_tag=JYJ20_RS04795;product=aspartate--ammonia ligase;protein_id=WP_006251384.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 66825 67304 . + . ID=gene-JYJ20_RS04800;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=JYJ20_RS04800 NZ_JAFIRP010000009.1 Protein Homology CDS 66825 67304 . + 0 ID=cds-WP_044427153.1;Parent=gene-JYJ20_RS04800;Dbxref=GenBank:WP_044427153.1;Name=WP_044427153.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248981.1;locus_tag=JYJ20_RS04800;product=transcriptional regulator AsnC;protein_id=WP_044427153.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 67393 67560 . - . ID=gene-JYJ20_RS04805;Name=JYJ20_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04805 NZ_JAFIRP010000009.1 Protein Homology CDS 67393 67560 . - 0 ID=cds-WP_006248980.1;Parent=gene-JYJ20_RS04805;Dbxref=GenBank:WP_006248980.1;Name=WP_006248980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248980.1;locus_tag=JYJ20_RS04805;product=DUF1232 domain-containing protein;protein_id=WP_006248980.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 67572 68012 . - . ID=gene-JYJ20_RS04810;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=JYJ20_RS04810 NZ_JAFIRP010000009.1 Protein Homology CDS 67572 68012 . - 0 ID=cds-WP_006248979.1;Parent=gene-JYJ20_RS04810;Dbxref=GenBank:WP_006248979.1;Name=WP_006248979.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248979.1;locus_tag=JYJ20_RS04810;product=FMN-binding protein MioC;protein_id=WP_006248979.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 68161 69756 . + . ID=gene-JYJ20_RS04815;Name=JYJ20_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04815 NZ_JAFIRP010000009.1 Protein Homology CDS 68161 69756 . + 0 ID=cds-WP_006248978.1;Parent=gene-JYJ20_RS04815;Dbxref=GenBank:WP_006248978.1;Name=WP_006248978.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248978.1;locus_tag=JYJ20_RS04815;product=ABC transporter substrate-binding protein;protein_id=WP_006248978.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 69758 70018 . + . ID=gene-JYJ20_RS04820;Name=JYJ20_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04820 NZ_JAFIRP010000009.1 GeneMarkS-2+ CDS 69758 70018 . + 0 ID=cds-WP_226318067.1;Parent=gene-JYJ20_RS04820;Dbxref=GenBank:WP_226318067.1;Name=WP_226318067.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=JYJ20_RS04820;product=hypothetical protein;protein_id=WP_226318067.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 70093 70971 . - . ID=gene-JYJ20_RS04825;Name=nanA;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=JYJ20_RS04825 NZ_JAFIRP010000009.1 Protein Homology CDS 70093 70971 . - 0 ID=cds-WP_006248966.1;Parent=gene-JYJ20_RS04825;Dbxref=GenBank:WP_006248966.1;Name=WP_006248966.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;gene=nanA;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005547128.1;locus_tag=JYJ20_RS04825;product=N-acetylneuraminate lyase;protein_id=WP_006248966.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 70996 71898 . - . ID=gene-JYJ20_RS04830;Name=JYJ20_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04830 NZ_JAFIRP010000009.1 Protein Homology CDS 70996 71898 . - 0 ID=cds-WP_006248965.1;Parent=gene-JYJ20_RS04830;Dbxref=GenBank:WP_006248965.1;Name=WP_006248965.1;Ontology_term=GO:0006051,GO:0005524,GO:0008270,GO:0009384;gbkey=CDS;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,N-acylmannosamine kinase activity|0009384||IEA;go_process=N-acetylmannosamine metabolic process|0006051||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248965.1;locus_tag=JYJ20_RS04830;product=N-acetylmannosamine kinase;protein_id=WP_006248965.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 71908 72597 . - . ID=gene-JYJ20_RS04835;Name=JYJ20_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04835 NZ_JAFIRP010000009.1 Protein Homology CDS 71908 72597 . - 0 ID=cds-WP_006251377.1;Parent=gene-JYJ20_RS04835;Dbxref=GenBank:WP_006251377.1;Name=WP_006251377.1;Ontology_term=GO:0005975,GO:0006051,GO:0019262,GO:0047465;gbkey=CDS;go_function=N-acylglucosamine-6-phosphate 2-epimerase activity|0047465||IEA;go_process=carbohydrate metabolic process|0005975||IEA,N-acetylmannosamine metabolic process|0006051||IEA,N-acetylneuraminate catabolic process|0019262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251377.1;locus_tag=JYJ20_RS04835;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WP_006251377.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 72804 72898 . - . ID=gene-JYJ20_RS04840;Name=JYJ20_RS04840;gbkey=Gene;gene_biotype=tRNA;locus_tag=JYJ20_RS04840 NZ_JAFIRP010000009.1 tRNAscan-SE tRNA 72804 72898 . - . ID=rna-JYJ20_RS04840;Parent=gene-JYJ20_RS04840;anticodon=(pos:complement(72862..72864));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS04840;product=tRNA-Sec NZ_JAFIRP010000009.1 tRNAscan-SE exon 72804 72898 . - . ID=exon-JYJ20_RS04840-1;Parent=rna-JYJ20_RS04840;anticodon=(pos:complement(72862..72864));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=JYJ20_RS04840;product=tRNA-Sec NZ_JAFIRP010000009.1 RefSeq gene 72966 74348 . + . ID=gene-JYJ20_RS04845;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=JYJ20_RS04845 NZ_JAFIRP010000009.1 Protein Homology CDS 72966 74348 . + 0 ID=cds-WP_021279696.1;Parent=gene-JYJ20_RS04845;Dbxref=GenBank:WP_021279696.1;Name=WP_021279696.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249387.1;locus_tag=JYJ20_RS04845;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_021279696.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 74406 75038 . + . ID=gene-JYJ20_RS04850;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=JYJ20_RS04850 NZ_JAFIRP010000009.1 Protein Homology CDS 74406 75038 . + 0 ID=cds-WP_044427156.1;Parent=gene-JYJ20_RS04850;Dbxref=GenBank:WP_044427156.1;Name=WP_044427156.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005575912.1;locus_tag=JYJ20_RS04850;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_044427156.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 75107 75283 . + . ID=gene-JYJ20_RS04855;Name=JYJ20_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04855 NZ_JAFIRP010000009.1 Protein Homology CDS 75107 75283 . + 0 ID=cds-WP_006249389.1;Parent=gene-JYJ20_RS04855;Dbxref=GenBank:WP_006249389.1;Name=WP_006249389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249389.1;locus_tag=JYJ20_RS04855;product=hypothetical protein;protein_id=WP_006249389.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 75280 75576 . + . ID=gene-JYJ20_RS04860;Name=JYJ20_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04860 NZ_JAFIRP010000009.1 Protein Homology CDS 75280 75576 . + 0 ID=cds-WP_006251374.1;Parent=gene-JYJ20_RS04860;Dbxref=GenBank:WP_006251374.1;Name=WP_006251374.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251374.1;locus_tag=JYJ20_RS04860;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_006251374.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 75586 77433 . + . ID=gene-JYJ20_RS04865;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=JYJ20_RS04865 NZ_JAFIRP010000009.1 Protein Homology CDS 75586 77433 . + 0 ID=cds-WP_006249391.1;Parent=gene-JYJ20_RS04865;Dbxref=GenBank:WP_006249391.1;Name=WP_006249391.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005608929.1;locus_tag=JYJ20_RS04865;product=selenocysteine-specific translation elongation factor;protein_id=WP_006249391.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 77617 78579 . + . ID=gene-JYJ20_RS04870;Name=JYJ20_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04870 NZ_JAFIRP010000009.1 Protein Homology CDS 77617 78579 . + 0 ID=cds-WP_006249392.1;Parent=gene-JYJ20_RS04870;Dbxref=GenBank:WP_006249392.1;Name=WP_006249392.1;Ontology_term=GO:0055085,GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761780.1;locus_tag=JYJ20_RS04870;product=TAXI family TRAP transporter solute-binding subunit;protein_id=WP_006249392.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 78781 81429 . + . ID=gene-JYJ20_RS04875;Name=JYJ20_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04875 NZ_JAFIRP010000009.1 Protein Homology CDS 78781 81429 . + 0 ID=cds-WP_044427163.1;Parent=gene-JYJ20_RS04875;Dbxref=GenBank:WP_044427163.1;Name=WP_044427163.1;Ontology_term=GO:0055085,GO:0031317;gbkey=CDS;go_component=tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249394.1;locus_tag=JYJ20_RS04875;product=TRAP transporter permease;protein_id=WP_044427163.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 81522 81947 . + . ID=gene-JYJ20_RS04880;Name=JYJ20_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04880 NZ_JAFIRP010000009.1 Protein Homology CDS 81522 81947 . + 0 ID=cds-WP_006249395.1;Parent=gene-JYJ20_RS04880;Dbxref=GenBank:WP_006249395.1;Name=WP_006249395.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249395.1;locus_tag=JYJ20_RS04880;product=universal stress protein;protein_id=WP_006249395.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 81984 83330 . + . ID=gene-JYJ20_RS04885;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=JYJ20_RS04885 NZ_JAFIRP010000009.1 Protein Homology CDS 81984 83330 . + 0 ID=cds-WP_006249396.1;Parent=gene-JYJ20_RS04885;Dbxref=GenBank:WP_006249396.1;Name=WP_006249396.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249396.1;locus_tag=JYJ20_RS04885;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_006249396.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 83330 84706 . + . ID=gene-JYJ20_RS04890;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=JYJ20_RS04890 NZ_JAFIRP010000009.1 Protein Homology CDS 83330 84706 . + 0 ID=cds-WP_006249397.1;Parent=gene-JYJ20_RS04890;Dbxref=GenBank:WP_006249397.1;Name=WP_006249397.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010945728.1;locus_tag=JYJ20_RS04890;product=Trk system potassium transporter TrkA;protein_id=WP_006249397.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 84839 85486 . - . ID=gene-JYJ20_RS04895;Name=JYJ20_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04895 NZ_JAFIRP010000009.1 Protein Homology CDS 84839 85486 . - 0 ID=cds-WP_006249399.1;Parent=gene-JYJ20_RS04895;Dbxref=GenBank:WP_006249399.1;Name=WP_006249399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005613280.1;locus_tag=JYJ20_RS04895;product=YagU family protein;protein_id=WP_006249399.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 85742 87187 . - . ID=gene-JYJ20_RS04900;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=JYJ20_RS04900 NZ_JAFIRP010000009.1 Protein Homology CDS 85742 87187 . - 0 ID=cds-WP_015484500.1;Parent=gene-JYJ20_RS04900;Dbxref=GenBank:WP_015484500.1;Name=WP_015484500.1;Ontology_term=GO:0016620;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484500.1;locus_tag=JYJ20_RS04900;product=aldehyde dehydrogenase;protein_id=WP_015484500.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 87454 88605 . - . ID=gene-JYJ20_RS04905;Name=fucO;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=JYJ20_RS04905 NZ_JAFIRP010000009.1 Protein Homology CDS 87454 88605 . - 0 ID=cds-WP_044427166.1;Parent=gene-JYJ20_RS04905;Dbxref=GenBank:WP_044427166.1;Name=WP_044427166.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fucO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599152.1;locus_tag=JYJ20_RS04905;product=lactaldehyde reductase;protein_id=WP_044427166.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 88734 88985 . - . ID=gene-JYJ20_RS04910;Name=JYJ20_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04910 NZ_JAFIRP010000009.1 Protein Homology CDS 88734 88985 . - 0 ID=cds-WP_006251370.1;Parent=gene-JYJ20_RS04910;Dbxref=GenBank:WP_006251370.1;Name=WP_006251370.1;Ontology_term=GO:0009401,GO:0034219,GO:0008982,GO:0016773,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=protein-N(PI)-phosphohistidine-carbohydrate phosphotransferase activity|0008982||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006251370.1;locus_tag=JYJ20_RS04910;product=PTS sugar transporter subunit IIB;protein_id=WP_006251370.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 89041 89988 . - . ID=gene-JYJ20_RS04915;Name=JYJ20_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04915 NZ_JAFIRP010000009.1 Protein Homology CDS 89041 89988 . - 0 ID=cds-WP_006249403.1;Parent=gene-JYJ20_RS04915;Dbxref=GenBank:WP_006249403.1;Name=WP_006249403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249403.1;locus_tag=JYJ20_RS04915;product=ABC transporter substrate-binding protein;protein_id=WP_006249403.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 90012 91010 . - . ID=gene-JYJ20_RS04920;Name=JYJ20_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04920 NZ_JAFIRP010000009.1 Protein Homology CDS 90012 91010 . - 0 ID=cds-WP_006249404.1;Parent=gene-JYJ20_RS04920;Dbxref=GenBank:WP_006249404.1;Name=WP_006249404.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249404.1;locus_tag=JYJ20_RS04920;product=ABC transporter permease;protein_id=WP_006249404.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 91007 92536 . - . ID=gene-JYJ20_RS04925;Name=JYJ20_RS04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04925 NZ_JAFIRP010000009.1 Protein Homology CDS 91007 92536 . - 0 ID=cds-WP_006249405.1;Parent=gene-JYJ20_RS04925;Dbxref=GenBank:WP_006249405.1;Name=WP_006249405.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249405.1;locus_tag=JYJ20_RS04925;product=sugar ABC transporter ATP-binding protein;protein_id=WP_006249405.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 92598 93251 . - . ID=gene-JYJ20_RS04930;Name=JYJ20_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04930 NZ_JAFIRP010000009.1 Protein Homology CDS 92598 93251 . - 0 ID=cds-WP_006249406.1;Parent=gene-JYJ20_RS04930;Dbxref=GenBank:WP_006249406.1;Name=WP_006249406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249406.1;locus_tag=JYJ20_RS04930;product=L-fuculose-phosphate aldolase;protein_id=WP_006249406.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 93311 93742 . - . ID=gene-JYJ20_RS04935;Name=fucU;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=JYJ20_RS04935 NZ_JAFIRP010000009.1 Protein Homology CDS 93311 93742 . - 0 ID=cds-WP_006249407.1;Parent=gene-JYJ20_RS04935;Dbxref=GenBank:WP_006249407.1;Name=WP_006249407.1;Ontology_term=GO:0042354,GO:0016854,GO:0042806;gbkey=CDS;gene=fucU;go_function=racemase and epimerase activity|0016854||IEA,fucose binding|0042806||IEA;go_process=L-fucose metabolic process|0042354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249407.1;locus_tag=JYJ20_RS04935;product=L-fucose mutarotase;protein_id=WP_006249407.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 93817 95250 . - . ID=gene-JYJ20_RS04940;Name=fucK;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=JYJ20_RS04940 NZ_JAFIRP010000009.1 Protein Homology CDS 93817 95250 . - 0 ID=cds-WP_006250520.1;Parent=gene-JYJ20_RS04940;Dbxref=GenBank:WP_006250520.1;Name=WP_006250520.1;Ontology_term=GO:0042355,GO:0008737;gbkey=CDS;gene=fucK;go_function=L-fuculokinase activity|0008737||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874965.1;locus_tag=JYJ20_RS04940;product=L-fuculokinase;protein_id=WP_006250520.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 95444 97210 . - . ID=gene-JYJ20_RS04945;Name=fucI;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=JYJ20_RS04945 NZ_JAFIRP010000009.1 Protein Homology CDS 95444 97210 . - 0 ID=cds-WP_209026053.1;Parent=gene-JYJ20_RS04945;Dbxref=GenBank:WP_209026053.1;Name=WP_209026053.1;Ontology_term=GO:0042355,GO:0008736,GO:0030145,GO:0005737;gbkey=CDS;gene=fucI;go_component=cytoplasm|0005737||IEA;go_function=L-fucose isomerase activity|0008736||IEA,manganese ion binding|0030145||IEA;go_process=L-fucose catabolic process|0042355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005619331.1;locus_tag=JYJ20_RS04945;product=L-fucose isomerase;protein_id=WP_209026053.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 97406 98152 . - . ID=gene-JYJ20_RS04950;Name=JYJ20_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04950 NZ_JAFIRP010000009.1 Protein Homology CDS 97406 98152 . - 0 ID=cds-WP_006253452.1;Parent=gene-JYJ20_RS04950;Dbxref=GenBank:WP_006253452.1;Name=WP_006253452.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005616080.1;locus_tag=JYJ20_RS04950;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_006253452.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 98435 100537 . + . ID=gene-JYJ20_RS04955;Name=JYJ20_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04955 NZ_JAFIRP010000009.1 Protein Homology CDS 98435 100537 . + 0 ID=cds-WP_006253453.1;Parent=gene-JYJ20_RS04955;Dbxref=GenBank:WP_006253453.1;Name=WP_006253453.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006253453.1;locus_tag=JYJ20_RS04955;product=TonB-dependent siderophore receptor;protein_id=WP_006253453.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 100663 100950 . - . ID=gene-JYJ20_RS04960;Name=JYJ20_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04960 NZ_JAFIRP010000009.1 Protein Homology CDS 100663 100950 . - 0 ID=cds-WP_006249767.1;Parent=gene-JYJ20_RS04960;Dbxref=GenBank:WP_006249767.1;Name=WP_006249767.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249767.1;locus_tag=JYJ20_RS04960;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_006249767.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 100943 101122 . - . ID=gene-JYJ20_RS04965;Name=JYJ20_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04965 NZ_JAFIRP010000009.1 Protein Homology CDS 100943 101122 . - 0 ID=cds-WP_006249766.1;Parent=gene-JYJ20_RS04965;Dbxref=GenBank:WP_006249766.1;Name=WP_006249766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249766.1;locus_tag=JYJ20_RS04965;product=hypothetical protein;protein_id=WP_006249766.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 101384 105280 . + . ID=gene-JYJ20_RS04970;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=JYJ20_RS04970 NZ_JAFIRP010000009.1 Protein Homology CDS 101384 105280 . + 0 ID=cds-WP_044427178.1;Parent=gene-JYJ20_RS04970;Dbxref=GenBank:WP_044427178.1;Name=WP_044427178.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249765.1;locus_tag=JYJ20_RS04970;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_044427178.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq pseudogene 105375 105526 . - . ID=gene-JYJ20_RS12445;Name=JYJ20_RS12445;end_range=105526,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS12445;partial=true;pseudo=true NZ_JAFIRP010000009.1 Protein Homology CDS 105375 105526 . - 0 ID=cds-JYJ20_RS12445;Parent=gene-JYJ20_RS12445;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=105526,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011758714.1;locus_tag=JYJ20_RS12445;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_JAFIRP010000009.1 RefSeq pseudogene 105635 105817 . + . ID=gene-JYJ20_RS04975;Name=JYJ20_RS04975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS04975;partial=true;pseudo=true;start_range=.,105635 NZ_JAFIRP010000009.1 Protein Homology CDS 105635 105817 . + 0 ID=cds-JYJ20_RS04975;Parent=gene-JYJ20_RS04975;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_060537127.1;locus_tag=JYJ20_RS04975;partial=true;product=IS1595 family transposase;pseudo=true;start_range=.,105635;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 106266 106643 . + . ID=gene-JYJ20_RS04980;Name=JYJ20_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04980 NZ_JAFIRP010000009.1 Protein Homology CDS 106266 106643 . + 0 ID=cds-WP_015484496.1;Parent=gene-JYJ20_RS04980;Dbxref=GenBank:WP_015484496.1;Name=WP_015484496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015484496.1;locus_tag=JYJ20_RS04980;product=TonB-dependent receptor;protein_id=WP_015484496.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 107310 108149 . + . ID=gene-JYJ20_RS04985;Name=JYJ20_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04985 NZ_JAFIRP010000009.1 Protein Homology CDS 107310 108149 . + 0 ID=cds-WP_245155384.1;Parent=gene-JYJ20_RS04985;Dbxref=GenBank:WP_245155384.1;Name=WP_245155384.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012801.7;locus_tag=JYJ20_RS04985;product=TonB-dependent receptor domain-containing protein;protein_id=WP_245155384.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq gene 108753 109247 . + . ID=gene-JYJ20_RS04990;Name=JYJ20_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=JYJ20_RS04990 NZ_JAFIRP010000009.1 Protein Homology CDS 108753 109247 . + 0 ID=cds-WP_006249761.1;Parent=gene-JYJ20_RS04990;Dbxref=GenBank:WP_006249761.1;Name=WP_006249761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249761.1;locus_tag=JYJ20_RS04990;product=REP-associated tyrosine transposase;protein_id=WP_006249761.1;transl_table=11 NZ_JAFIRP010000009.1 RefSeq pseudogene 109502 109741 . + . ID=gene-JYJ20_RS04995;Name=JYJ20_RS04995;end_range=109741,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS04995;partial=true;pseudo=true NZ_JAFIRP010000009.1 Protein Homology CDS 109502 109741 . + 0 ID=cds-JYJ20_RS04995;Parent=gene-JYJ20_RS04995;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=109741,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018651213.1;locus_tag=JYJ20_RS04995;partial=true;product=asparaginase domain-containing protein;pseudo=true;transl_table=11 NZ_JAFIRP010000009.1 RefSeq pseudogene 109940 110230 . - . ID=gene-JYJ20_RS05000;Name=JYJ20_RS05000;end_range=110230,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=JYJ20_RS05000;partial=true;pseudo=true NZ_JAFIRP010000009.1 Protein Homology CDS 109940 110230 . - 0 ID=cds-JYJ20_RS05000;Parent=gene-JYJ20_RS05000;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;end_range=110230,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006249760.1;locus_tag=JYJ20_RS05000;partial=true;product=IS1595-like element ISMha2 family transposase;pseudo=true;transl_table=11 ###