##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM643936v1 #!genome-build-accession NCBI_Assembly:GCF_006439365.1 #!annotation-date 02/26/2026 09:52:12 #!annotation-source NCBI RefSeq GCF_006439365.1-RS_2026_02_26 ##sequence-region NZ_VFSY01000001.1 1 30479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000001.1 RefSeq region 1 30479 . + . ID=NZ_VFSY01000001.1:1..30479;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000001.1 RefSeq gene 171 356 . - . ID=gene-FJM01_RS00005;Name=FJM01_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00005;old_locus_tag=FJM01_00005 NZ_VFSY01000001.1 GeneMarkS-2+ CDS 171 356 . - 0 ID=cds-WP_140700831.1;Parent=gene-FJM01_RS00005;Dbxref=GenBank:WP_140700831.1;Name=WP_140700831.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00005;product=hypothetical protein;protein_id=WP_140700831.1;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 360 1346 . - . ID=gene-FJM01_RS00010;Name=FJM01_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00010;old_locus_tag=FJM01_00010 NZ_VFSY01000001.1 GeneMarkS-2+ CDS 360 1346 . - 0 ID=cds-WP_140700832.1;Parent=gene-FJM01_RS00010;Dbxref=GenBank:WP_140700832.1;Name=WP_140700832.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00010;product=carbohydrate ABC transporter permease;protein_id=WP_140700832.1;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 1288 2328 . - . ID=gene-FJM01_RS00015;Name=FJM01_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00015;old_locus_tag=FJM01_00015 NZ_VFSY01000001.1 Protein Homology CDS 1288 2328 . - 0 ID=cds-WP_140700833.1;Parent=gene-FJM01_RS00015;Dbxref=GenBank:WP_140700833.1;Name=WP_140700833.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054272.1;locus_tag=FJM01_RS00015;product=carbohydrate ABC transporter permease;protein_id=WP_140700833.1;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 2332 4296 . - . ID=gene-FJM01_RS00020;Name=FJM01_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00020;old_locus_tag=FJM01_00020 NZ_VFSY01000001.1 Protein Homology CDS 2332 4296 . - 0 ID=cds-WP_140700834.1;Parent=gene-FJM01_RS00020;Dbxref=GenBank:WP_140700834.1;Name=WP_140700834.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=FJM01_RS00020;product=ATP-binding cassette domain-containing protein;protein_id=WP_140700834.1;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 4323 5261 . - . ID=gene-FJM01_RS00025;Name=FJM01_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00025;old_locus_tag=FJM01_00025 NZ_VFSY01000001.1 GeneMarkS-2+ CDS 4323 5261 . - 0 ID=cds-WP_140700835.1;Parent=gene-FJM01_RS00025;Dbxref=GenBank:WP_140700835.1;Name=WP_140700835.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00025;product=thermonuclease family protein;protein_id=WP_140700835.1;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 5360 7420 . - . ID=gene-FJM01_RS00030;Name=FJM01_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00030;old_locus_tag=FJM01_00030 NZ_VFSY01000001.1 Protein Homology CDS 5360 7420 . - 0 ID=cds-WP_261368917.1;Parent=gene-FJM01_RS00030;Dbxref=GenBank:WP_261368917.1;Name=WP_261368917.1;Ontology_term=GO:0009897;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA;inference=COORDINATES: protein motif:HMM:NF045826.1;locus_tag=FJM01_RS00030;product=P68 family surface lipoprotein;protein_id=WP_261368917.1;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 7414 7614 . + . ID=gene-FJM01_RS03330;Name=FJM01_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03330 NZ_VFSY01000001.1 GeneMarkS-2+ CDS 7414 7614 . + 0 ID=cds-WP_261368918.1;Parent=gene-FJM01_RS03330;Dbxref=GenBank:WP_261368918.1;Name=WP_261368918.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03330;product=hypothetical protein;protein_id=WP_261368918.1;transl_table=4 NZ_VFSY01000001.1 RefSeq pseudogene 7872 8359 . + . ID=gene-FJM01_RS00040;Name=FJM01_RS00040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=FJM01_RS00040;old_locus_tag=FJM01_00040;pseudo=true NZ_VFSY01000001.1 Protein Homology CDS 7872 8359 . + 0 ID=cds-FJM01_RS00040;Parent=gene-FJM01_RS00040;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013514.8;locus_tag=FJM01_RS00040;product=ribonuclease HII;pseudo=true;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 8377 10002 . - . ID=gene-FJM01_RS00045;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=FJM01_RS00045;old_locus_tag=FJM01_00045 NZ_VFSY01000001.1 Protein Homology CDS 8377 10002 . - 0 ID=cds-WP_140700838.1;Parent=gene-FJM01_RS00045;Dbxref=GenBank:WP_140700838.1;Name=WP_140700838.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: protein motif:HMM:TIGR00456.1;locus_tag=FJM01_RS00045;product=arginine--tRNA ligase;protein_id=WP_140700838.1;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 10059 11267 . + . ID=gene-FJM01_RS00050;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=FJM01_RS00050;old_locus_tag=FJM01_00050 NZ_VFSY01000001.1 Protein Homology CDS 10059 11267 . + 0 ID=cds-WP_140700839.1;Parent=gene-FJM01_RS00050;Dbxref=GenBank:WP_140700839.1;Name=WP_140700839.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: protein motif:HMM:NF013565.7;locus_tag=FJM01_RS00050;product=cysteine--tRNA ligase;protein_id=WP_140700839.1;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 11267 11953 . + . ID=gene-FJM01_RS00055;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=FJM01_RS00055;old_locus_tag=FJM01_00055 NZ_VFSY01000001.1 Protein Homology CDS 11267 11953 . + 0 ID=cds-WP_140700840.1;Parent=gene-FJM01_RS00055;Dbxref=GenBank:WP_140700840.1;Name=WP_140700840.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: protein motif:HMM:TIGR00186.1;locus_tag=FJM01_RS00055;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_140700840.1;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 11997 12932 . - . ID=gene-FJM01_RS00060;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=FJM01_RS00060;old_locus_tag=FJM01_00060 NZ_VFSY01000001.1 Protein Homology CDS 11997 12932 . - 0 ID=cds-WP_124724099.1;Parent=gene-FJM01_RS00060;Dbxref=GenBank:WP_124724099.1;Name=WP_124724099.1;Ontology_term=GO:0006527,GO:0016310,GO:0005524,GO:0008804;gbkey=CDS;gene=arcC;go_function=ATP binding|0005524||IEA,carbamate kinase activity|0008804||IEA;go_process=L-arginine catabolic process|0006527||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429427.1;locus_tag=FJM01_RS00060;product=carbamate kinase;protein_id=WP_124724099.1;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 12935 13978 . - . ID=gene-FJM01_RS00065;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=FJM01_RS00065;old_locus_tag=FJM01_00065 NZ_VFSY01000001.1 Protein Homology CDS 12935 13978 . - 0 ID=cds-WP_124724100.1;Parent=gene-FJM01_RS00065;Dbxref=GenBank:WP_124724100.1;Name=WP_124724100.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054749.1;locus_tag=FJM01_RS00065;product=ornithine carbamoyltransferase;protein_id=WP_124724100.1;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 14287 14775 . - . ID=gene-FJM01_RS00070;Name=FJM01_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00070;old_locus_tag=FJM01_00070 NZ_VFSY01000001.1 Protein Homology CDS 14287 14775 . - 0 ID=cds-WP_124724101.1;Parent=gene-FJM01_RS00070;Dbxref=GenBank:WP_124724101.1;Name=WP_124724101.1;Ontology_term=GO:0034220,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054382.1;locus_tag=FJM01_RS00070;product=large conductance mechanosensitive channel protein MscL;protein_id=WP_124724101.1;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 14903 16627 . + . ID=gene-FJM01_RS00075;Name=FJM01_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00075;old_locus_tag=FJM01_00075 NZ_VFSY01000001.1 Protein Homology CDS 14903 16627 . + 0 ID=cds-WP_140700841.1;Parent=gene-FJM01_RS00075;Dbxref=GenBank:WP_140700841.1;Name=WP_140700841.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004521,GO:0004534,GO:0008270,GO:0046872;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA,5'-3' RNA exonuclease activity|0004534||IEA,zinc ion binding|0008270||IEA,metal ion binding|0046872||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054637.1;locus_tag=FJM01_RS00075;product=ribonuclease J;protein_id=WP_140700841.1;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 16709 18634 . + . ID=gene-FJM01_RS00080;Name=FJM01_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00080;old_locus_tag=FJM01_00080 NZ_VFSY01000001.1 Protein Homology CDS 16709 18634 . + 0 ID=cds-WP_140700842.1;Parent=gene-FJM01_RS00080;Dbxref=GenBank:WP_140700842.1;Name=WP_140700842.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054297.1;locus_tag=FJM01_RS00080;product=DNA gyrase/topoisomerase IV subunit B;protein_id=WP_140700842.1;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 18641 21418 . + . ID=gene-FJM01_RS00085;Name=FJM01_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00085;old_locus_tag=FJM01_00085 NZ_VFSY01000001.1 Protein Homology CDS 18641 21418 . + 0 ID=cds-WP_140700843.1;Parent=gene-FJM01_RS00085;Dbxref=GenBank:WP_140700843.1;Name=WP_140700843.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: protein motif:HMM:NF004044.1;locus_tag=FJM01_RS00085;product=DNA topoisomerase (ATP-hydrolyzing);protein_id=WP_140700843.1;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 21467 21589 . + . ID=gene-FJM01_RS03335;Name=FJM01_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03335 NZ_VFSY01000001.1 GeneMarkS-2+ CDS 21467 21589 . + 0 ID=cds-WP_261368919.1;Parent=gene-FJM01_RS03335;Dbxref=GenBank:WP_261368919.1;Name=WP_261368919.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03335;product=hypothetical protein;protein_id=WP_261368919.1;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 21651 22691 . + . ID=gene-FJM01_RS00090;Name=FJM01_RS00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00090;old_locus_tag=FJM01_00090 NZ_VFSY01000001.1 Protein Homology CDS 21651 22691 . + 0 ID=cds-WP_140700844.1;Parent=gene-FJM01_RS00090;Dbxref=GenBank:WP_140700844.1;Name=WP_140700844.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: protein motif:HMM:NF016146.7;locus_tag=FJM01_RS00090;product=endonuclease;protein_id=WP_140700844.1;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 22749 24062 . + . ID=gene-FJM01_RS00095;Name=FJM01_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00095;old_locus_tag=FJM01_00095 NZ_VFSY01000001.1 Protein Homology CDS 22749 24062 . + 0 ID=cds-WP_140700845.1;Parent=gene-FJM01_RS00095;Dbxref=GenBank:WP_140700845.1;Name=WP_140700845.1;Ontology_term=GO:0008270,GO:0016805;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,dipeptidase activity|0016805||IEA;inference=COORDINATES: protein motif:HMM:NF013696.7;locus_tag=FJM01_RS00095;product=Sapep family Mn(2+)-dependent dipeptidase;protein_id=WP_140700845.1;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 24062 24763 . + . ID=gene-FJM01_RS00100;Name=FJM01_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00100;old_locus_tag=FJM01_00100 NZ_VFSY01000001.1 Protein Homology CDS 24062 24763 . + 0 ID=cds-WP_261368920.1;Parent=gene-FJM01_RS00100;Dbxref=GenBank:WP_261368920.1;Name=WP_261368920.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: protein motif:HMM:NF013045.7;locus_tag=FJM01_RS00100;product=pseudouridine synthase;protein_id=WP_261368920.1;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 24760 27657 . - . ID=gene-FJM01_RS00105;Name=FJM01_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00105;old_locus_tag=FJM01_00105 NZ_VFSY01000001.1 Protein Homology CDS 24760 27657 . - 0 ID=cds-WP_140700847.1;Parent=gene-FJM01_RS00105;Dbxref=GenBank:WP_140700847.1;Name=WP_140700847.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF012905.7;locus_tag=FJM01_RS00105;product=cation-translocating P-type ATPase;protein_id=WP_140700847.1;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 27762 29480 . - . ID=gene-FJM01_RS00110;Name=FJM01_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00110;old_locus_tag=FJM01_00110 NZ_VFSY01000001.1 Protein Homology CDS 27762 29480 . - 0 ID=cds-WP_124724107.1;Parent=gene-FJM01_RS00110;Dbxref=GenBank:WP_124724107.1;Name=WP_124724107.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF024910.7;locus_tag=FJM01_RS00110;product=APC family permease;protein_id=WP_124724107.1;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 29621 30160 . + . ID=gene-FJM01_RS00115;Name=FJM01_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00115;old_locus_tag=FJM01_00115 NZ_VFSY01000001.1 Protein Homology CDS 29621 30160 . + 0 ID=cds-WP_140700848.1;Parent=gene-FJM01_RS00115;Dbxref=GenBank:WP_140700848.1;Name=WP_140700848.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF013053.8;locus_tag=FJM01_RS00115;product=cysteine hydrolase family protein;protein_id=WP_140700848.1;transl_table=4 NZ_VFSY01000001.1 RefSeq gene 30247 30479 . + . ID=gene-FJM01_RS00120;Name=FJM01_RS00120;end_range=30479,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00120;old_locus_tag=FJM01_00120;partial=true NZ_VFSY01000001.1 GeneMarkS-2+ CDS 30247 30479 . + 0 ID=cds-WP_140700849.1;Parent=gene-FJM01_RS00120;Dbxref=GenBank:WP_140700849.1;Name=WP_140700849.1;end_range=30479,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00120;partial=true;product=hypothetical protein;protein_id=WP_140700849.1;transl_table=4 ##sequence-region NZ_VFSY01000015.1 1 11304 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000015.1 RefSeq region 1 11304 . + . ID=NZ_VFSY01000015.1:1..11304;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000015.1 RefSeq gene 1 2000 . + . ID=gene-FJM01_RS00445;Name=FJM01_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00445;old_locus_tag=FJM01_00445;partial=true;start_range=.,1 NZ_VFSY01000015.1 Protein Homology CDS 1 2000 . + 2 ID=cds-WP_140700896.1;Parent=gene-FJM01_RS00445;Dbxref=GenBank:WP_140700896.1;Name=WP_140700896.1;Ontology_term=GO:0032508,GO:0003677,GO:0003678,GO:0005524,GO:0016887,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,metal ion binding|0046872||IEA;go_process=obsolete DNA duplex unwinding|0032508||IEA;inference=COORDINATES: protein motif:HMM:NF024991.7;locus_tag=FJM01_RS00445;partial=true;product=ATP-dependent DNA helicase;protein_id=WP_140700896.1;start_range=.,1;transl_table=4 NZ_VFSY01000015.1 RefSeq gene 2157 2708 . + . ID=gene-FJM01_RS00450;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=FJM01_RS00450;old_locus_tag=FJM01_00450 NZ_VFSY01000015.1 Protein Homology CDS 2157 2708 . + 0 ID=cds-WP_140700897.1;Parent=gene-FJM01_RS00450;Dbxref=GenBank:WP_140700897.1;Name=WP_140700897.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: protein motif:HMM:NF013368.7;locus_tag=FJM01_RS00450;product=aminoacyl-tRNA hydrolase;protein_id=WP_140700897.1;transl_table=4 NZ_VFSY01000015.1 RefSeq gene 2701 3615 . + . ID=gene-FJM01_RS00455;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=FJM01_RS00455;old_locus_tag=FJM01_00455 NZ_VFSY01000015.1 Protein Homology CDS 2701 3615 . + 0 ID=cds-WP_140700898.1;Parent=gene-FJM01_RS00455;Dbxref=GenBank:WP_140700898.1;Name=WP_140700898.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: protein motif:HMM:TIGR02432.1;locus_tag=FJM01_RS00455;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_140700898.1;transl_table=4 NZ_VFSY01000015.1 RefSeq gene 3642 5756 . + . ID=gene-FJM01_RS00460;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=FJM01_RS00460;old_locus_tag=FJM01_00460 NZ_VFSY01000015.1 Protein Homology CDS 3642 5756 . + 0 ID=cds-WP_140700899.1;Parent=gene-FJM01_RS00460;Dbxref=GenBank:WP_140700899.1;Name=WP_140700899.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054698.1;locus_tag=FJM01_RS00460;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_140700899.1;transl_table=4 NZ_VFSY01000015.1 RefSeq gene 5917 6507 . + . ID=gene-FJM01_RS03235;Name=FJM01_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03235 NZ_VFSY01000015.1 GeneMarkS-2+ CDS 5917 6507 . + 0 ID=cds-WP_186390744.1;Parent=gene-FJM01_RS03235;Dbxref=GenBank:WP_186390744.1;Name=WP_186390744.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03235;product=hypothetical protein;protein_id=WP_186390744.1;transl_table=4 NZ_VFSY01000015.1 RefSeq gene 6473 6757 . + . ID=gene-FJM01_RS00470;Name=FJM01_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00470;old_locus_tag=FJM01_00470 NZ_VFSY01000015.1 GeneMarkS-2+ CDS 6473 6757 . + 0 ID=cds-WP_140700900.1;Parent=gene-FJM01_RS00470;Dbxref=GenBank:WP_140700900.1;Name=WP_140700900.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00470;product=hypothetical protein;protein_id=WP_140700900.1;transl_table=4 NZ_VFSY01000015.1 RefSeq gene 6780 7397 . - . ID=gene-FJM01_RS00475;Name=FJM01_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00475;old_locus_tag=FJM01_00475 NZ_VFSY01000015.1 Protein Homology CDS 6780 7397 . - 0 ID=cds-WP_245979673.1;Parent=gene-FJM01_RS00475;Dbxref=GenBank:WP_245979673.1;Name=WP_245979673.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016085.7;locus_tag=FJM01_RS00475;product=DUF402 domain-containing protein;protein_id=WP_245979673.1;transl_table=4 NZ_VFSY01000015.1 RefSeq gene 7569 8276 . + . ID=gene-FJM01_RS00480;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=FJM01_RS00480;old_locus_tag=FJM01_00480 NZ_VFSY01000015.1 Protein Homology CDS 7569 8276 . + 0 ID=cds-WP_140700901.1;Parent=gene-FJM01_RS00480;Dbxref=GenBank:WP_140700901.1;Name=WP_140700901.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: protein motif:HMM:TIGR00091.1;locus_tag=FJM01_RS00480;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_140700901.1;transl_table=4 NZ_VFSY01000015.1 RefSeq gene 8370 11105 . + . ID=gene-FJM01_RS00485;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=FJM01_RS00485;old_locus_tag=FJM01_00485 NZ_VFSY01000015.1 Protein Homology CDS 8370 11105 . + 0 ID=cds-WP_186390745.1;Parent=gene-FJM01_RS00485;Dbxref=GenBank:WP_186390745.1;Name=WP_186390745.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054665.1;locus_tag=FJM01_RS00485;product=DNA gyrase subunit A;protein_id=WP_186390745.1;transl_table=4 ##sequence-region NZ_VFSY01000028.1 1 6097 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000028.1 RefSeq region 1 6097 . + . ID=NZ_VFSY01000028.1:1..6097;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000028.1 RefSeq gene 215 685 . - . ID=gene-FJM01_RS02815;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=FJM01_RS02815;old_locus_tag=FJM01_02815 NZ_VFSY01000028.1 Protein Homology CDS 215 685 . - 0 ID=cds-WP_140701297.1;Parent=gene-FJM01_RS02815;Dbxref=GenBank:WP_140701297.1;Name=WP_140701297.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054284.1;locus_tag=FJM01_RS02815;product=transcription elongation factor GreA;protein_id=WP_140701297.1;transl_table=4 NZ_VFSY01000028.1 RefSeq gene 730 1437 . - . ID=gene-FJM01_RS02820;Name=FJM01_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02820;old_locus_tag=FJM01_02820 NZ_VFSY01000028.1 Protein Homology CDS 730 1437 . - 0 ID=cds-WP_140701299.1;Parent=gene-FJM01_RS02820;Dbxref=GenBank:WP_140701299.1;Name=WP_140701299.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045844.1;locus_tag=FJM01_RS02820;product=BC85_0335 family putative methyltransferase;protein_id=WP_140701299.1;transl_table=4 NZ_VFSY01000028.1 RefSeq gene 1427 1720 . - . ID=gene-FJM01_RS02825;Name=FJM01_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02825;old_locus_tag=FJM01_02825 NZ_VFSY01000028.1 GeneMarkS-2+ CDS 1427 1720 . - 0 ID=cds-WP_124724577.1;Parent=gene-FJM01_RS02825;Dbxref=GenBank:WP_124724577.1;Name=WP_124724577.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02825;product=hypothetical protein;protein_id=WP_124724577.1;transl_table=4 NZ_VFSY01000028.1 RefSeq gene 1713 2144 . - . ID=gene-FJM01_RS02830;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=FJM01_RS02830;old_locus_tag=FJM01_02830 NZ_VFSY01000028.1 Protein Homology CDS 1713 2144 . - 0 ID=cds-WP_140701301.1;Parent=gene-FJM01_RS02830;Dbxref=GenBank:WP_140701301.1;Name=WP_140701301.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054471.1;locus_tag=FJM01_RS02830;product=Holliday junction resolvase RuvX;protein_id=WP_140701301.1;transl_table=4 NZ_VFSY01000028.1 RefSeq gene 2146 4797 . - . ID=gene-FJM01_RS02835;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=FJM01_RS02835;old_locus_tag=FJM01_02835 NZ_VFSY01000028.1 Protein Homology CDS 2146 4797 . - 0 ID=cds-WP_140701303.1;Parent=gene-FJM01_RS02835;Dbxref=GenBank:WP_140701303.1;Name=WP_140701303.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054442.1;locus_tag=FJM01_RS02835;product=alanine--tRNA ligase;protein_id=WP_140701303.1;transl_table=4 NZ_VFSY01000028.1 RefSeq pseudogene 4807 5918 . - . ID=gene-FJM01_RS02840;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=pseudogene;locus_tag=FJM01_RS02840;old_locus_tag=FJM01_02840;pseudo=true NZ_VFSY01000028.1 Protein Homology CDS 4807 5918 . - 0 ID=cds-FJM01_RS02840;Parent=gene-FJM01_RS02840;Note=frameshifted;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054196.1;locus_tag=FJM01_RS02840;product=tRNA 2-thiouridine(34) synthase MnmA;pseudo=true;transl_table=4 NZ_VFSY01000028.1 RefSeq gene 5989 6094 . - . ID=gene-FJM01_RS02845;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=FJM01_RS02845;old_locus_tag=FJM01_02845 NZ_VFSY01000028.1 cmsearch rRNA 5989 6094 . - . ID=rna-FJM01_RS02845;Parent=gene-FJM01_RS02845;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=FJM01_RS02845;product=5S ribosomal RNA NZ_VFSY01000028.1 cmsearch exon 5989 6094 . - . ID=exon-FJM01_RS02845-1;Parent=rna-FJM01_RS02845;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=FJM01_RS02845;product=5S ribosomal RNA ##sequence-region NZ_VFSY01000025.1 1 70597 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000025.1 RefSeq region 1 70597 . + . ID=NZ_VFSY01000025.1:1..70597;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000025.1 RefSeq gene 197 388 . + . ID=gene-FJM01_RS02030;Name=FJM01_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02030;old_locus_tag=FJM01_02030 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 197 388 . + 0 ID=cds-WP_124724451.1;Parent=gene-FJM01_RS02030;Dbxref=GenBank:WP_124724451.1;Name=WP_124724451.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02030;product=hypothetical protein;protein_id=WP_124724451.1;transl_table=4 NZ_VFSY01000025.1 RefSeq pseudogene 676 3484 . + . ID=gene-FJM01_RS02035;Name=FJM01_RS02035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=FJM01_RS02035;old_locus_tag=FJM01_02035;pseudo=true NZ_VFSY01000025.1 Protein Homology CDS 676 3484 . + 0 ID=cds-FJM01_RS02035;Parent=gene-FJM01_RS02035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_124724452.1;locus_tag=FJM01_RS02035;product=OppA family ABC transporter substrate-binding lipoprotein;pseudo=true;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 3502 4635 . + . ID=gene-FJM01_RS02040;Name=FJM01_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02040;old_locus_tag=FJM01_02040 NZ_VFSY01000025.1 Protein Homology CDS 3502 4635 . + 0 ID=cds-WP_140701118.1;Parent=gene-FJM01_RS02040;Dbxref=GenBank:WP_140701118.1;Name=WP_140701118.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012738.7;locus_tag=FJM01_RS02040;product=ABC transporter permease;protein_id=WP_140701118.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 4641 5951 . + . ID=gene-FJM01_RS02045;Name=FJM01_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02045;old_locus_tag=FJM01_02045 NZ_VFSY01000025.1 Protein Homology CDS 4641 5951 . + 0 ID=cds-WP_186390760.1;Parent=gene-FJM01_RS02045;Dbxref=GenBank:WP_186390760.1;Name=WP_186390760.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF012738.7;locus_tag=FJM01_RS02045;product=ABC transporter permease;protein_id=WP_186390760.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 5951 6286 . + . ID=gene-FJM01_RS03620;Name=FJM01_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03620 NZ_VFSY01000025.1 Protein Homology CDS 5951 6286 . + 0 ID=cds-WP_334199155.1;Parent=gene-FJM01_RS03620;Dbxref=GenBank:WP_334199155.1;Name=WP_334199155.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=FJM01_RS03620;product=ATP-binding cassette domain-containing protein;protein_id=WP_334199155.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 6366 7091 . + . ID=gene-FJM01_RS03625;Name=FJM01_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03625 NZ_VFSY01000025.1 Protein Homology CDS 6366 7091 . + 0 ID=cds-WP_334199157.1;Parent=gene-FJM01_RS03625;Dbxref=GenBank:WP_334199157.1;Name=WP_334199157.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=FJM01_RS03625;product=ABC transporter ATP-binding protein;protein_id=WP_334199157.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 7078 9585 . + . ID=gene-FJM01_RS02055;Name=FJM01_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02055;old_locus_tag=FJM01_02055 NZ_VFSY01000025.1 Protein Homology CDS 7078 9585 . + 0 ID=cds-WP_140701120.1;Parent=gene-FJM01_RS02055;Dbxref=GenBank:WP_140701120.1;Name=WP_140701120.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054151.1;locus_tag=FJM01_RS02055;product=ATP-binding cassette domain-containing protein;protein_id=WP_140701120.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 9668 10168 . + . ID=gene-FJM01_RS02060;Name=FJM01_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02060;old_locus_tag=FJM01_02060 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 9668 10168 . + 0 ID=cds-WP_124724456.1;Parent=gene-FJM01_RS02060;Dbxref=GenBank:WP_124724456.1;Name=WP_124724456.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02060;product=hypothetical protein;protein_id=WP_124724456.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 10178 10903 . + . ID=gene-FJM01_RS02065;Name=FJM01_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02065;old_locus_tag=FJM01_02065 NZ_VFSY01000025.1 Protein Homology CDS 10178 10903 . + 0 ID=cds-WP_140701122.1;Parent=gene-FJM01_RS02065;Dbxref=GenBank:WP_140701122.1;Name=WP_140701122.1;Ontology_term=GO:0006096,GO:0004807,GO:0031625,GO:0042803;gbkey=CDS;go_function=triose-phosphate isomerase activity|0004807||IEA,ubiquitin protein ligase binding|0031625||IEA,protein homodimerization activity|0042803||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: protein motif:HMM:NF012349.7;locus_tag=FJM01_RS02065;product=triose-phosphate isomerase;protein_id=WP_140701122.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 10903 11277 . + . ID=gene-FJM01_RS02070;Name=FJM01_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02070;old_locus_tag=FJM01_02070 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 10903 11277 . + 0 ID=cds-WP_140701124.1;Parent=gene-FJM01_RS02070;Dbxref=GenBank:WP_140701124.1;Name=WP_140701124.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02070;product=hypothetical protein;protein_id=WP_140701124.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 11315 12040 . - . ID=gene-FJM01_RS02075;Name=FJM01_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02075;old_locus_tag=FJM01_02075 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 11315 12040 . - 0 ID=cds-WP_140701126.1;Parent=gene-FJM01_RS02075;Dbxref=GenBank:WP_140701126.1;Name=WP_140701126.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02075;product=hypothetical protein;protein_id=WP_140701126.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 12172 14145 . - . ID=gene-FJM01_RS02080;Name=FJM01_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02080;old_locus_tag=FJM01_02080 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 12172 14145 . - 0 ID=cds-WP_140701128.1;Parent=gene-FJM01_RS02080;Dbxref=GenBank:WP_140701128.1;Name=WP_140701128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02080;product=transglutaminase-like domain-containing protein;protein_id=WP_140701128.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 14472 15485 . - . ID=gene-FJM01_RS02085;Name=FJM01_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02085;old_locus_tag=FJM01_02085 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 14472 15485 . - 0 ID=cds-WP_140701130.1;Parent=gene-FJM01_RS02085;Dbxref=GenBank:WP_140701130.1;Name=WP_140701130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02085;product=hypothetical protein;protein_id=WP_140701130.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 15526 17061 . - . ID=gene-FJM01_RS02090;Name=FJM01_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02090;old_locus_tag=FJM01_02090 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 15526 17061 . - 0 ID=cds-WP_140701132.1;Parent=gene-FJM01_RS02090;Dbxref=GenBank:WP_140701132.1;Name=WP_140701132.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02090;product=transglutaminase-like domain-containing protein;protein_id=WP_140701132.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 17206 18069 . - . ID=gene-FJM01_RS02095;Name=FJM01_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02095;old_locus_tag=FJM01_02095 NZ_VFSY01000025.1 Protein Homology CDS 17206 18069 . - 0 ID=cds-WP_140701134.1;Parent=gene-FJM01_RS02095;Dbxref=GenBank:WP_140701134.1;Name=WP_140701134.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF005518.0;locus_tag=FJM01_RS02095;product=FAD synthase;protein_id=WP_140701134.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 18071 18832 . - . ID=gene-FJM01_RS02100;Name=FJM01_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02100;old_locus_tag=FJM01_02100 NZ_VFSY01000025.1 Protein Homology CDS 18071 18832 . - 0 ID=cds-WP_140701136.1;Parent=gene-FJM01_RS02100;Dbxref=GenBank:WP_140701136.1;Name=WP_140701136.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: protein motif:HMM:NF012797.7;locus_tag=FJM01_RS02100;product=TrmH family RNA methyltransferase;protein_id=WP_140701136.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 18888 19694 . - . ID=gene-FJM01_RS02105;Name=FJM01_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02105;old_locus_tag=FJM01_02105 NZ_VFSY01000025.1 Protein Homology CDS 18888 19694 . - 0 ID=cds-WP_124724463.1;Parent=gene-FJM01_RS02105;Dbxref=GenBank:WP_124724463.1;Name=WP_124724463.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045966.1;locus_tag=FJM01_RS02105;product=YcsE-related riboflavin metabolism phosphatase;protein_id=WP_124724463.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 19705 20037 . - . ID=gene-FJM01_RS03465;Name=FJM01_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03465 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 19705 20037 . - 0 ID=cds-WP_261368969.1;Parent=gene-FJM01_RS03465;Dbxref=GenBank:WP_261368969.1;Name=WP_261368969.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03465;product=hypothetical protein;protein_id=WP_261368969.1;transl_table=4 NZ_VFSY01000025.1 RefSeq pseudogene 20104 20274 . - . ID=gene-FJM01_RS03680;Name=FJM01_RS03680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=FJM01_RS03680;partial=true;pseudo=true;start_range=.,20104 NZ_VFSY01000025.1 Protein Homology CDS 20104 20274 . - 0 ID=cds-FJM01_RS03680;Parent=gene-FJM01_RS03680;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013660.7;locus_tag=FJM01_RS03680;partial=true;product=hypothetical protein;pseudo=true;start_range=.,20104;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 20243 20557 . - . ID=gene-FJM01_RS03470;Name=FJM01_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03470 NZ_VFSY01000025.1 Protein Homology CDS 20243 20557 . - 0 ID=cds-WP_261368970.1;Parent=gene-FJM01_RS03470;Dbxref=GenBank:WP_261368970.1;Name=WP_261368970.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013660.7;locus_tag=FJM01_RS03470;product=hypothetical protein;protein_id=WP_261368970.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 20625 20708 . - . ID=gene-FJM01_RS02115;Name=FJM01_RS02115;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS02115;old_locus_tag=FJM01_02115 NZ_VFSY01000025.1 tRNAscan-SE tRNA 20625 20708 . - . ID=rna-FJM01_RS02115;Parent=gene-FJM01_RS02115;anticodon=(pos:complement(20672..20674));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02115;product=tRNA-Leu NZ_VFSY01000025.1 tRNAscan-SE exon 20625 20708 . - . ID=exon-FJM01_RS02115-1;Parent=rna-FJM01_RS02115;anticodon=(pos:complement(20672..20674));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02115;product=tRNA-Leu NZ_VFSY01000025.1 RefSeq gene 20712 20787 . - . ID=gene-FJM01_RS02120;Name=FJM01_RS02120;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS02120;old_locus_tag=FJM01_02120 NZ_VFSY01000025.1 tRNAscan-SE tRNA 20712 20787 . - . ID=rna-FJM01_RS02120;Parent=gene-FJM01_RS02120;anticodon=(pos:complement(20752..20754));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02120;product=tRNA-Thr NZ_VFSY01000025.1 tRNAscan-SE exon 20712 20787 . - . ID=exon-FJM01_RS02120-1;Parent=rna-FJM01_RS02120;anticodon=(pos:complement(20752..20754));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02120;product=tRNA-Thr NZ_VFSY01000025.1 RefSeq gene 20866 21126 . - . ID=gene-FJM01_RS02125;Name=FJM01_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02125;old_locus_tag=FJM01_02125 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 20866 21126 . - 0 ID=cds-WP_140701138.1;Parent=gene-FJM01_RS02125;Dbxref=GenBank:WP_140701138.1;Name=WP_140701138.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02125;product=hypothetical protein;protein_id=WP_140701138.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 21335 21712 . + . ID=gene-FJM01_RS02130;Name=FJM01_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02130;old_locus_tag=FJM01_02130 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 21335 21712 . + 0 ID=cds-WP_124724466.1;Parent=gene-FJM01_RS02130;Dbxref=GenBank:WP_124724466.1;Name=WP_124724466.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02130;product=hypothetical protein;protein_id=WP_124724466.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 21728 22873 . - . ID=gene-FJM01_RS02135;Name=FJM01_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02135;old_locus_tag=FJM01_02135 NZ_VFSY01000025.1 Protein Homology CDS 21728 22873 . - 0 ID=cds-WP_140701140.1;Parent=gene-FJM01_RS02135;Dbxref=GenBank:WP_140701140.1;Name=WP_140701140.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013245.7;locus_tag=FJM01_RS02135;product=ABC transporter permease;protein_id=WP_140701140.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 22873 23790 . - . ID=gene-FJM01_RS02140;Name=FJM01_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02140;old_locus_tag=FJM01_02140 NZ_VFSY01000025.1 Protein Homology CDS 22873 23790 . - 0 ID=cds-WP_124724468.1;Parent=gene-FJM01_RS02140;Dbxref=GenBank:WP_124724468.1;Name=WP_124724468.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=FJM01_RS02140;product=ABC transporter ATP-binding protein;protein_id=WP_124724468.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 23935 25302 . - . ID=gene-FJM01_RS02145;Name=FJM01_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02145;old_locus_tag=FJM01_02145 NZ_VFSY01000025.1 Protein Homology CDS 23935 25302 . - 0 ID=cds-WP_140701142.1;Parent=gene-FJM01_RS02145;Dbxref=GenBank:WP_140701142.1;Name=WP_140701142.1;Ontology_term=GO:0016888,GO:0009897;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA;go_function=DNA endonuclease activity%2C producing 5'-phosphomonoesters|0016888||IEA;inference=COORDINATES: protein motif:HMM:NF045851.1;locus_tag=FJM01_RS02145;product=MnuA family membrane nuclease;protein_id=WP_140701142.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 25388 25463 . - . ID=gene-FJM01_RS02150;Name=FJM01_RS02150;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS02150;old_locus_tag=FJM01_02150 NZ_VFSY01000025.1 tRNAscan-SE tRNA 25388 25463 . - . ID=rna-FJM01_RS02150;Parent=gene-FJM01_RS02150;anticodon=(pos:complement(25428..25430));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02150;product=tRNA-Val NZ_VFSY01000025.1 tRNAscan-SE exon 25388 25463 . - . ID=exon-FJM01_RS02150-1;Parent=rna-FJM01_RS02150;anticodon=(pos:complement(25428..25430));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02150;product=tRNA-Val NZ_VFSY01000025.1 RefSeq gene 25466 25541 . - . ID=gene-FJM01_RS02155;Name=FJM01_RS02155;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS02155;old_locus_tag=FJM01_02155 NZ_VFSY01000025.1 tRNAscan-SE tRNA 25466 25541 . - . ID=rna-FJM01_RS02155;Parent=gene-FJM01_RS02155;anticodon=(pos:complement(25506..25508));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02155;product=tRNA-Glu NZ_VFSY01000025.1 tRNAscan-SE exon 25466 25541 . - . ID=exon-FJM01_RS02155-1;Parent=rna-FJM01_RS02155;anticodon=(pos:complement(25506..25508));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02155;product=tRNA-Glu NZ_VFSY01000025.1 RefSeq gene 25546 25620 . - . ID=gene-FJM01_RS02160;Name=FJM01_RS02160;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS02160;old_locus_tag=FJM01_02160 NZ_VFSY01000025.1 tRNAscan-SE tRNA 25546 25620 . - . ID=rna-FJM01_RS02160;Parent=gene-FJM01_RS02160;anticodon=(pos:complement(25586..25588));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02160;product=tRNA-Asn NZ_VFSY01000025.1 tRNAscan-SE exon 25546 25620 . - . ID=exon-FJM01_RS02160-1;Parent=rna-FJM01_RS02160;anticodon=(pos:complement(25586..25588));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02160;product=tRNA-Asn NZ_VFSY01000025.1 RefSeq gene 25827 25902 . - . ID=gene-FJM01_RS02165;Name=FJM01_RS02165;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS02165;old_locus_tag=FJM01_02165 NZ_VFSY01000025.1 tRNAscan-SE tRNA 25827 25902 . - . ID=rna-FJM01_RS02165;Parent=gene-FJM01_RS02165;anticodon=(pos:complement(25867..25869));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02165;product=tRNA-Thr NZ_VFSY01000025.1 tRNAscan-SE exon 25827 25902 . - . ID=exon-FJM01_RS02165-1;Parent=rna-FJM01_RS02165;anticodon=(pos:complement(25867..25869));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02165;product=tRNA-Thr NZ_VFSY01000025.1 RefSeq gene 26039 26479 . + . ID=gene-FJM01_RS02170;Name=FJM01_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02170;old_locus_tag=FJM01_02170 NZ_VFSY01000025.1 Protein Homology CDS 26039 26479 . + 0 ID=cds-WP_124724470.1;Parent=gene-FJM01_RS02170;Dbxref=GenBank:WP_124724470.1;Name=WP_124724470.1;Ontology_term=GO:0006355,GO:0000976,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF014439.7;locus_tag=FJM01_RS02170;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_124724470.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 26488 27378 . + . ID=gene-FJM01_RS02175;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=FJM01_RS02175;old_locus_tag=FJM01_02175 NZ_VFSY01000025.1 Protein Homology CDS 26488 27378 . + 0 ID=cds-WP_334199158.1;Parent=gene-FJM01_RS02175;Dbxref=GenBank:WP_334199158.1;Name=WP_334199158.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: protein motif:HMM:TIGR00006.1;locus_tag=FJM01_RS02175;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_334199158.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 27413 28375 . + . ID=gene-FJM01_RS02180;Name=FJM01_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02180;old_locus_tag=FJM01_02180 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 27413 28375 . + 0 ID=cds-WP_140701146.1;Parent=gene-FJM01_RS02180;Dbxref=GenBank:WP_140701146.1;Name=WP_140701146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02180;product=hypothetical protein;protein_id=WP_140701146.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 28387 29520 . + . ID=gene-FJM01_RS02185;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=FJM01_RS02185;old_locus_tag=FJM01_02185 NZ_VFSY01000025.1 Protein Homology CDS 28387 29520 . + 0 ID=cds-WP_124724473.1;Parent=gene-FJM01_RS02185;Dbxref=GenBank:WP_124724473.1;Name=WP_124724473.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: protein motif:HMM:TIGR00065.1;locus_tag=FJM01_RS02185;product=cell division protein FtsZ;protein_id=WP_124724473.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 29711 30799 . + . ID=gene-FJM01_RS02190;Name=FJM01_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02190;old_locus_tag=FJM01_02190 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 29711 30799 . + 0 ID=cds-WP_140701148.1;Parent=gene-FJM01_RS02190;Dbxref=GenBank:WP_140701148.1;Name=WP_140701148.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02190;product=XRE family transcriptional regulator;protein_id=WP_140701148.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 30830 31360 . - . ID=gene-FJM01_RS02195;Name=FJM01_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02195;old_locus_tag=FJM01_02195 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 30830 31360 . - 0 ID=cds-WP_140701150.1;Parent=gene-FJM01_RS02195;Dbxref=GenBank:WP_140701150.1;Name=WP_140701150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02195;product=hypothetical protein;protein_id=WP_140701150.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 31350 31868 . - . ID=gene-FJM01_RS02200;Name=FJM01_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02200;old_locus_tag=FJM01_02200 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 31350 31868 . - 0 ID=cds-WP_140701152.1;Parent=gene-FJM01_RS02200;Dbxref=GenBank:WP_140701152.1;Name=WP_140701152.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02200;product=hypothetical protein;protein_id=WP_140701152.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 31881 34223 . - . ID=gene-FJM01_RS02205;Name=FJM01_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02205;old_locus_tag=FJM01_02205 NZ_VFSY01000025.1 Protein Homology CDS 31881 34223 . - 0 ID=cds-WP_140701154.1;Parent=gene-FJM01_RS02205;Dbxref=GenBank:WP_140701154.1;Name=WP_140701154.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045850.1;locus_tag=FJM01_RS02205;product=OppA family ABC transporter substrate-binding lipoprotein;protein_id=WP_140701154.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 34225 35148 . - . ID=gene-FJM01_RS02210;Name=FJM01_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02210;old_locus_tag=FJM01_02210 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 34225 35148 . - 0 ID=cds-WP_140701156.1;Parent=gene-FJM01_RS02210;Dbxref=GenBank:WP_140701156.1;Name=WP_140701156.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02210;product=ZIP family metal transporter;protein_id=WP_140701156.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 35250 37097 . + . ID=gene-FJM01_RS02215;Name=FJM01_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02215;old_locus_tag=FJM01_02215 NZ_VFSY01000025.1 Protein Homology CDS 35250 37097 . + 0 ID=cds-WP_261368971.1;Parent=gene-FJM01_RS02215;Dbxref=GenBank:WP_261368971.1;Name=WP_261368971.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045963.1;locus_tag=FJM01_RS02215;product=MAG3240 family lipoprotein;protein_id=WP_261368971.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 37108 38112 . + . ID=gene-FJM01_RS02220;Name=FJM01_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02220;old_locus_tag=FJM01_02220 NZ_VFSY01000025.1 Protein Homology CDS 37108 38112 . + 0 ID=cds-WP_140701160.1;Parent=gene-FJM01_RS02220;Dbxref=GenBank:WP_140701160.1;Name=WP_140701160.1;Ontology_term=GO:0009897;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA;inference=COORDINATES: protein motif:HMM:NF045840.1;locus_tag=FJM01_RS02220;product=HxHSH motif-containing lipoprotein;protein_id=WP_140701160.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 38172 38378 . - . ID=gene-FJM01_RS02225;Name=FJM01_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02225;old_locus_tag=FJM01_02225 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 38172 38378 . - 0 ID=cds-WP_140701162.1;Parent=gene-FJM01_RS02225;Dbxref=GenBank:WP_140701162.1;Name=WP_140701162.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02225;product=hypothetical protein;protein_id=WP_140701162.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 38525 38713 . - . ID=gene-FJM01_RS02230;Name=FJM01_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02230;old_locus_tag=FJM01_02230 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 38525 38713 . - 0 ID=cds-WP_140701164.1;Parent=gene-FJM01_RS02230;Dbxref=GenBank:WP_140701164.1;Name=WP_140701164.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02230;product=hypothetical protein;protein_id=WP_140701164.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 38758 39927 . - . ID=gene-FJM01_RS02235;Name=FJM01_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02235;old_locus_tag=FJM01_02235 NZ_VFSY01000025.1 Protein Homology CDS 38758 39927 . - 0 ID=cds-WP_140701166.1;Parent=gene-FJM01_RS02235;Dbxref=GenBank:WP_140701166.1;Name=WP_140701166.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012738.7;locus_tag=FJM01_RS02235;product=ABC transporter permease subunit;protein_id=WP_140701166.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 39920 40876 . - . ID=gene-FJM01_RS02240;Name=FJM01_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02240;old_locus_tag=FJM01_02240 NZ_VFSY01000025.1 Protein Homology CDS 39920 40876 . - 0 ID=cds-WP_124724483.1;Parent=gene-FJM01_RS02240;Dbxref=GenBank:WP_124724483.1;Name=WP_124724483.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012738.7;locus_tag=FJM01_RS02240;product=ABC transporter permease subunit;protein_id=WP_124724483.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 40878 41627 . - . ID=gene-FJM01_RS02245;Name=FJM01_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02245;old_locus_tag=FJM01_02245 NZ_VFSY01000025.1 Protein Homology CDS 40878 41627 . - 0 ID=cds-WP_140701168.1;Parent=gene-FJM01_RS02245;Dbxref=GenBank:WP_140701168.1;Name=WP_140701168.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033817.2;locus_tag=FJM01_RS02245;product=variable surface lipoprotein;protein_id=WP_140701168.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 41756 42595 . + . ID=gene-FJM01_RS02250;Name=FJM01_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02250;old_locus_tag=FJM01_02250 NZ_VFSY01000025.1 Protein Homology CDS 41756 42595 . + 0 ID=cds-WP_140701170.1;Parent=gene-FJM01_RS02250;Dbxref=GenBank:WP_140701170.1;Name=WP_140701170.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045870.1;locus_tag=FJM01_RS02250;product=MAGa7180 family putative nuclease;protein_id=WP_140701170.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 42567 43937 . + . ID=gene-FJM01_RS02255;Name=FJM01_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02255;old_locus_tag=FJM01_02255 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 42567 43937 . + 0 ID=cds-WP_140701171.1;Parent=gene-FJM01_RS02255;Dbxref=GenBank:WP_140701171.1;Name=WP_140701171.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02255;product=hypothetical protein;protein_id=WP_140701171.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 43885 44724 . + . ID=gene-FJM01_RS02260;Name=FJM01_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02260;old_locus_tag=FJM01_02260 NZ_VFSY01000025.1 Protein Homology CDS 43885 44724 . + 0 ID=cds-WP_186390761.1;Parent=gene-FJM01_RS02260;Dbxref=GenBank:WP_186390761.1;Name=WP_186390761.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045869.1;locus_tag=FJM01_RS02260;product=UU173 family protein;protein_id=WP_186390761.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 44773 45270 . + . ID=gene-FJM01_RS02265;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=FJM01_RS02265;old_locus_tag=FJM01_02265 NZ_VFSY01000025.1 Protein Homology CDS 44773 45270 . + 0 ID=cds-WP_140701175.1;Parent=gene-FJM01_RS02265;Dbxref=GenBank:WP_140701175.1;Name=WP_140701175.1;gbkey=CDS;gene=recU;inference=COORDINATES: protein motif:HMM:NF002581.0;locus_tag=FJM01_RS02265;product=Holliday junction resolvase RecU;protein_id=WP_140701175.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 45267 45542 . - . ID=gene-FJM01_RS02270;Name=FJM01_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02270;old_locus_tag=FJM01_02270 NZ_VFSY01000025.1 Protein Homology CDS 45267 45542 . - 0 ID=cds-WP_124724486.1;Parent=gene-FJM01_RS02270;Dbxref=GenBank:WP_124724486.1;Name=WP_124724486.1;Ontology_term=GO:0030261,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: protein motif:HMM:NF012442.7;locus_tag=FJM01_RS02270;product=HU family DNA-binding protein;protein_id=WP_124724486.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 45563 46552 . - . ID=gene-FJM01_RS02275;Name=FJM01_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02275;old_locus_tag=FJM01_02275 NZ_VFSY01000025.1 Protein Homology CDS 45563 46552 . - 0 ID=cds-WP_140701177.1;Parent=gene-FJM01_RS02275;Dbxref=GenBank:WP_140701177.1;Name=WP_140701177.1;Ontology_term=GO:0006072,GO:0046167,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,glycerol-3-phosphate biosynthetic process|0046167||IEA;inference=COORDINATES: protein motif:HMM:NF013383.7;locus_tag=FJM01_RS02275;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_140701177.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 46579 47877 . - . ID=gene-FJM01_RS02280;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=FJM01_RS02280;old_locus_tag=FJM01_02280 NZ_VFSY01000025.1 Protein Homology CDS 46579 47877 . - 0 ID=cds-WP_334199156.1;Parent=gene-FJM01_RS02280;Dbxref=GenBank:WP_334199156.1;Name=WP_334199156.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: protein motif:HMM:TIGR03594.1;locus_tag=FJM01_RS02280;product=ribosome biogenesis GTPase Der;protein_id=WP_334199156.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 47870 48544 . - . ID=gene-FJM01_RS02285;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=FJM01_RS02285;old_locus_tag=FJM01_02285 NZ_VFSY01000025.1 Protein Homology CDS 47870 48544 . - 0 ID=cds-WP_124724489.1;Parent=gene-FJM01_RS02285;Dbxref=GenBank:WP_124724489.1;Name=WP_124724489.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: protein motif:HMM:TIGR00017.1;locus_tag=FJM01_RS02285;product=(d)CMP kinase;protein_id=WP_124724489.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 48560 48907 . - . ID=gene-FJM01_RS02290;Name=FJM01_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02290;old_locus_tag=FJM01_02290 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 48560 48907 . - 0 ID=cds-WP_140701179.1;Parent=gene-FJM01_RS02290;Dbxref=GenBank:WP_140701179.1;Name=WP_140701179.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02290;product=hypothetical protein;protein_id=WP_140701179.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 48912 49634 . - . ID=gene-FJM01_RS02295;Name=FJM01_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02295;old_locus_tag=FJM01_02295 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 48912 49634 . - 0 ID=cds-WP_140701181.1;Parent=gene-FJM01_RS02295;Dbxref=GenBank:WP_140701181.1;Name=WP_140701181.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02295;product=hypothetical protein;protein_id=WP_140701181.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 49618 49902 . - . ID=gene-FJM01_RS02300;Name=FJM01_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02300;old_locus_tag=FJM01_02300 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 49618 49902 . - 0 ID=cds-WP_140701183.1;Parent=gene-FJM01_RS02300;Dbxref=GenBank:WP_140701183.1;Name=WP_140701183.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02300;product=hypothetical protein;protein_id=WP_140701183.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 50085 51950 . - . ID=gene-FJM01_RS02305;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=FJM01_RS02305;old_locus_tag=FJM01_02305 NZ_VFSY01000025.1 Protein Homology CDS 50085 51950 . - 0 ID=cds-WP_186390762.1;Parent=gene-FJM01_RS02305;Dbxref=GenBank:WP_186390762.1;Name=WP_186390762.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054252.1;locus_tag=FJM01_RS02305;product=type I DNA topoisomerase;protein_id=WP_186390762.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 52032 52871 . - . ID=gene-FJM01_RS02310;Name=FJM01_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02310;old_locus_tag=FJM01_02310 NZ_VFSY01000025.1 Protein Homology CDS 52032 52871 . - 0 ID=cds-WP_261368972.1;Parent=gene-FJM01_RS02310;Dbxref=GenBank:WP_261368972.1;Name=WP_261368972.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013705.7;locus_tag=FJM01_RS02310;product=DnaJ C-terminal domain-containing protein;protein_id=WP_261368972.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 52910 53149 . - . ID=gene-FJM01_RS03475;Name=FJM01_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03475;old_locus_tag=FJM01_02315 NZ_VFSY01000025.1 Protein Homology CDS 52910 53149 . - 0 ID=cds-WP_315850233.1;Parent=gene-FJM01_RS03475;Dbxref=GenBank:WP_315850233.1;Name=WP_315850233.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012451.7;locus_tag=FJM01_RS03475;product=DnaJ domain-containing protein;protein_id=WP_315850233.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 53185 53898 . - . ID=gene-FJM01_RS02320;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=FJM01_RS02320;old_locus_tag=FJM01_02320 NZ_VFSY01000025.1 Protein Homology CDS 53185 53898 . - 0 ID=cds-WP_140701187.1;Parent=gene-FJM01_RS02320;Dbxref=GenBank:WP_140701187.1;Name=WP_140701187.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054650.1;locus_tag=FJM01_RS02320;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_140701187.1;transl_table=4 NZ_VFSY01000025.1 RefSeq pseudogene 53898 54979 . - . ID=gene-FJM01_RS02325;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=pseudogene;locus_tag=FJM01_RS02325;old_locus_tag=FJM01_02325;pseudo=true NZ_VFSY01000025.1 Protein Homology CDS 53898 54979 . - 0 ID=cds-FJM01_RS02325;Parent=gene-FJM01_RS02325;Note=frameshifted;Ontology_term=GO:0006415,GO:0016149;gbkey=CDS;gene=prfA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054747.1;locus_tag=FJM01_RS02325;product=peptide chain release factor 1;pseudo=true;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 55065 55139 . + . ID=gene-FJM01_RS02330;Name=FJM01_RS02330;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS02330;old_locus_tag=FJM01_02330 NZ_VFSY01000025.1 tRNAscan-SE tRNA 55065 55139 . + . ID=rna-FJM01_RS02330;Parent=gene-FJM01_RS02330;anticodon=(pos:55097..55099);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02330;product=tRNA-Thr NZ_VFSY01000025.1 tRNAscan-SE exon 55065 55139 . + . ID=exon-FJM01_RS02330-1;Parent=rna-FJM01_RS02330;anticodon=(pos:55097..55099);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02330;product=tRNA-Thr NZ_VFSY01000025.1 RefSeq gene 55237 55311 . - . ID=gene-FJM01_RS02335;Name=FJM01_RS02335;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS02335;old_locus_tag=FJM01_02335 NZ_VFSY01000025.1 tRNAscan-SE tRNA 55237 55311 . - . ID=rna-FJM01_RS02335;Parent=gene-FJM01_RS02335;anticodon=(pos:complement(55277..55279));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02335;product=tRNA-Trp NZ_VFSY01000025.1 tRNAscan-SE exon 55237 55311 . - . ID=exon-FJM01_RS02335-1;Parent=rna-FJM01_RS02335;anticodon=(pos:complement(55277..55279));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02335;product=tRNA-Trp NZ_VFSY01000025.1 RefSeq gene 55339 55563 . - . ID=gene-FJM01_RS02340;Name=FJM01_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02340;old_locus_tag=FJM01_02340 NZ_VFSY01000025.1 Protein Homology CDS 55339 55563 . - 0 ID=cds-WP_124724495.1;Parent=gene-FJM01_RS02340;Dbxref=GenBank:WP_124724495.1;Name=WP_124724495.1;Ontology_term=GO:0006633,GO:0009245,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: protein motif:HMM:NF012759.7;locus_tag=FJM01_RS02340;product=acyl carrier protein;protein_id=WP_124724495.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 55572 55925 . - . ID=gene-FJM01_RS03685;Name=FJM01_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03685 NZ_VFSY01000025.1 Protein Homology CDS 55572 55925 . - 0 ID=cds-WP_416371556.1;Parent=gene-FJM01_RS03685;Dbxref=GenBank:WP_416371556.1;Name=WP_416371556.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045957.1;locus_tag=FJM01_RS03685;product=MHO_1590 family protein;protein_id=WP_416371556.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 55810 56421 . - . ID=gene-FJM01_RS02345;Name=FJM01_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02345;old_locus_tag=FJM01_02345 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 55810 56421 . - 0 ID=cds-WP_140701189.1;Parent=gene-FJM01_RS02345;Dbxref=GenBank:WP_140701189.1;Name=WP_140701189.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02345;product=hypothetical protein;protein_id=WP_140701189.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 56423 57556 . - . ID=gene-FJM01_RS02350;Name=FJM01_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02350;old_locus_tag=FJM01_02350 NZ_VFSY01000025.1 Protein Homology CDS 56423 57556 . - 0 ID=cds-WP_124724497.1;Parent=gene-FJM01_RS02350;Dbxref=GenBank:WP_124724497.1;Name=WP_124724497.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045960.1;locus_tag=FJM01_RS02350;product=MHO_1580 family protein;protein_id=WP_124724497.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 57534 57863 . - . ID=gene-FJM01_RS02355;Name=FJM01_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02355;old_locus_tag=FJM01_02355 NZ_VFSY01000025.1 GeneMarkS-2+ CDS 57534 57863 . - 0 ID=cds-WP_140701191.1;Parent=gene-FJM01_RS02355;Dbxref=GenBank:WP_140701191.1;Name=WP_140701191.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02355;product=hypothetical protein;protein_id=WP_140701191.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 57965 58663 . + . ID=gene-FJM01_RS02360;Name=FJM01_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02360;old_locus_tag=FJM01_02360 NZ_VFSY01000025.1 Protein Homology CDS 57965 58663 . + 0 ID=cds-WP_124724499.1;Parent=gene-FJM01_RS02360;Dbxref=GenBank:WP_124724499.1;Name=WP_124724499.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: protein motif:HMM:TIGR00093.1;locus_tag=FJM01_RS02360;product=pseudouridine synthase;protein_id=WP_124724499.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 58678 60168 . - . ID=gene-FJM01_RS02365;Name=FJM01_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02365;old_locus_tag=FJM01_02365 NZ_VFSY01000025.1 Protein Homology CDS 58678 60168 . - 0 ID=cds-WP_140701193.1;Parent=gene-FJM01_RS02365;Dbxref=GenBank:WP_140701193.1;Name=WP_140701193.1;Ontology_term=GO:0016744,GO:0030976,GO:0046872;gbkey=CDS;go_function=transketolase or transaldolase activity|0016744||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF012670.7;locus_tag=FJM01_RS02365;product=transketolase family protein;protein_id=WP_140701193.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 60197 60505 . - . ID=gene-FJM01_RS02370;Name=FJM01_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02370;old_locus_tag=FJM01_02370 NZ_VFSY01000025.1 Protein Homology CDS 60197 60505 . - 0 ID=cds-WP_140701195.1;Parent=gene-FJM01_RS02370;Dbxref=GenBank:WP_140701195.1;Name=WP_140701195.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012670.7;locus_tag=FJM01_RS02370;product=thiamine pyrophosphate-dependent enzyme;protein_id=WP_140701195.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 60492 60806 . - . ID=gene-FJM01_RS02375;Name=FJM01_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02375;old_locus_tag=FJM01_02375 NZ_VFSY01000025.1 Protein Homology CDS 60492 60806 . - 0 ID=cds-WP_124724501.1;Parent=gene-FJM01_RS02375;Dbxref=GenBank:WP_124724501.1;Name=WP_124724501.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045836.1;locus_tag=FJM01_RS02375;product=MMB_0454 family protein;protein_id=WP_124724501.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 60810 61367 . - . ID=gene-FJM01_RS02380;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=FJM01_RS02380;old_locus_tag=FJM01_02380 NZ_VFSY01000025.1 Protein Homology CDS 60810 61367 . - 0 ID=cds-WP_140701197.1;Parent=gene-FJM01_RS02380;Dbxref=GenBank:WP_140701197.1;Name=WP_140701197.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387389.1;locus_tag=FJM01_RS02380;product=elongation factor P;protein_id=WP_140701197.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 61472 61753 . + . ID=gene-FJM01_RS03480;Name=FJM01_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03480 NZ_VFSY01000025.1 Protein Homology CDS 61472 61753 . + 0 ID=cds-WP_261368973.1;Parent=gene-FJM01_RS03480;Dbxref=GenBank:WP_261368973.1;Name=WP_261368973.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014586.7;locus_tag=FJM01_RS03480;product=hypothetical protein;protein_id=WP_261368973.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 61788 62234 . + . ID=gene-FJM01_RS03485;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=FJM01_RS03485 NZ_VFSY01000025.1 Protein Homology CDS 61788 62234 . + 0 ID=cds-WP_261368975.1;Parent=gene-FJM01_RS03485;Dbxref=GenBank:WP_261368975.1;Name=WP_261368975.1;Ontology_term=GO:0009435,GO:0008795,GO:0005737;gbkey=CDS;gene=nadE;go_component=cytoplasm|0005737||IEA;go_function=NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: protein motif:HMM:TIGR00552.1;locus_tag=FJM01_RS03485;product=NAD(+) synthase;protein_id=WP_261368975.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 62252 63400 . - . ID=gene-FJM01_RS02390;Name=FJM01_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02390;old_locus_tag=FJM01_02390 NZ_VFSY01000025.1 Protein Homology CDS 62252 63400 . - 0 ID=cds-WP_124724503.1;Parent=gene-FJM01_RS02390;Dbxref=GenBank:WP_124724503.1;Name=WP_124724503.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045960.1;locus_tag=FJM01_RS02390;product=MHO_1580 family protein;protein_id=WP_124724503.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 64152 64700 . - . ID=gene-FJM01_RS02395;Name=FJM01_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02395;old_locus_tag=FJM01_02395 NZ_VFSY01000025.1 Protein Homology CDS 64152 64700 . - 0 ID=cds-WP_140701199.1;Parent=gene-FJM01_RS02395;Dbxref=GenBank:WP_140701199.1;Name=WP_140701199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054625.1;locus_tag=FJM01_RS02395;product=inorganic diphosphatase;protein_id=WP_140701199.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 64798 65409 . + . ID=gene-FJM01_RS02400;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=FJM01_RS02400;old_locus_tag=FJM01_02400 NZ_VFSY01000025.1 Protein Homology CDS 64798 65409 . + 0 ID=cds-WP_124724505.1;Parent=gene-FJM01_RS02400;Dbxref=GenBank:WP_124724505.1;Name=WP_124724505.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:TIGR00084.2;locus_tag=FJM01_RS02400;product=Holliday junction branch migration protein RuvA;protein_id=WP_124724505.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 65393 66340 . + . ID=gene-FJM01_RS02405;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=FJM01_RS02405;old_locus_tag=FJM01_02405 NZ_VFSY01000025.1 Protein Homology CDS 65393 66340 . + 0 ID=cds-WP_140701201.1;Parent=gene-FJM01_RS02405;Dbxref=GenBank:WP_140701201.1;Name=WP_140701201.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054490.1;locus_tag=FJM01_RS02405;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_140701201.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 66412 69057 . + . ID=gene-FJM01_RS02410;Name=secDF;gbkey=Gene;gene=secDF;gene_biotype=protein_coding;locus_tag=FJM01_RS02410;old_locus_tag=FJM01_02410 NZ_VFSY01000025.1 Protein Homology CDS 66412 69057 . + 0 ID=cds-WP_140701203.1;Parent=gene-FJM01_RS02410;Dbxref=GenBank:WP_140701203.1;Name=WP_140701203.1;gbkey=CDS;gene=secDF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_124724507.1;locus_tag=FJM01_RS02410;product=protein translocase subunit SecDF;protein_id=WP_140701203.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 69073 70329 . + . ID=gene-FJM01_RS02415;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=FJM01_RS02415;old_locus_tag=FJM01_02415 NZ_VFSY01000025.1 Protein Homology CDS 69073 70329 . + 0 ID=cds-WP_140701205.1;Parent=gene-FJM01_RS02415;Dbxref=GenBank:WP_140701205.1;Name=WP_140701205.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: protein motif:HMM:TIGR00442.1;locus_tag=FJM01_RS02415;product=histidine--tRNA ligase;protein_id=WP_140701205.1;transl_table=4 NZ_VFSY01000025.1 RefSeq gene 70340 70597 . + . ID=gene-FJM01_RS02420;Name=FJM01_RS02420;end_range=70597,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02420;old_locus_tag=FJM01_02420;partial=true NZ_VFSY01000025.1 Protein Homology CDS 70340 70597 . + 0 ID=cds-WP_261368974.1;Parent=gene-FJM01_RS02420;Dbxref=GenBank:WP_261368974.1;Name=WP_261368974.1;Ontology_term=GO:0003676;end_range=70597,.;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: protein motif:HMM:NF013499.7;locus_tag=FJM01_RS02420;partial=true;product=OB-fold nucleic acid binding domain-containing protein;protein_id=WP_261368974.1;transl_table=4 ##sequence-region NZ_VFSY01000026.1 1 32152 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000026.1 RefSeq region 1 32152 . + . ID=NZ_VFSY01000026.1:1..32152;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000026.1 RefSeq gene 1 1510 . + . ID=gene-FJM01_RS02425;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=FJM01_RS02425;old_locus_tag=FJM01_02425;partial=true;start_range=.,1 NZ_VFSY01000026.1 Protein Homology CDS 1 1510 . + 1 ID=cds-WP_140701211.1;Parent=gene-FJM01_RS02425;Dbxref=GenBank:WP_140701211.1;Name=WP_140701211.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: protein motif:HMM:NF001750.0;locus_tag=FJM01_RS02425;partial=true;product=aspartate--tRNA ligase;protein_id=WP_140701211.1;start_range=.,1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 1514 1765 . + . ID=gene-FJM01_RS02430;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=FJM01_RS02430;old_locus_tag=FJM01_02430 NZ_VFSY01000026.1 Protein Homology CDS 1514 1765 . + 0 ID=cds-WP_124724510.1;Parent=gene-FJM01_RS02430;Dbxref=GenBank:WP_124724510.1;Name=WP_124724510.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054679.1;locus_tag=FJM01_RS02430;product=preprotein translocase subunit SecG;protein_id=WP_124724510.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 1766 2167 . + . ID=gene-FJM01_RS03490;Name=FJM01_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03490 NZ_VFSY01000026.1 GeneMarkS-2+ CDS 1766 2167 . + 0 ID=cds-WP_261368976.1;Parent=gene-FJM01_RS03490;Dbxref=GenBank:WP_261368976.1;Name=WP_261368976.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03490;product=hypothetical protein;protein_id=WP_261368976.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 2205 3923 . + . ID=gene-FJM01_RS02435;Name=FJM01_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02435;old_locus_tag=FJM01_02435 NZ_VFSY01000026.1 Protein Homology CDS 2205 3923 . + 0 ID=cds-WP_261368979.1;Parent=gene-FJM01_RS02435;Dbxref=GenBank:WP_261368979.1;Name=WP_261368979.1;Ontology_term=GO:0003723,GO:0004527;gbkey=CDS;go_function=RNA binding|0003723||IEA,exonuclease activity|0004527||IEA;inference=COORDINATES: protein motif:HMM:TIGR00358.1;locus_tag=FJM01_RS02435;product=ribonuclease R family protein;protein_id=WP_261368979.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 3969 4400 . + . ID=gene-FJM01_RS02440;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=FJM01_RS02440;old_locus_tag=FJM01_02440 NZ_VFSY01000026.1 Protein Homology CDS 3969 4400 . + 0 ID=cds-WP_140701213.1;Parent=gene-FJM01_RS02440;Dbxref=GenBank:WP_140701213.1;Name=WP_140701213.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054469.1;locus_tag=FJM01_RS02440;product=SsrA-binding protein SmpB;protein_id=WP_140701213.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 4401 4785 . + . ID=gene-FJM01_RS02445;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=FJM01_RS02445;old_locus_tag=FJM01_02445 NZ_VFSY01000026.1 cmsearch tmRNA 4401 4785 . + . ID=rna-FJM01_RS02445;Parent=gene-FJM01_RS02445;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=FJM01_RS02445;product=transfer-messenger RNA NZ_VFSY01000026.1 cmsearch exon 4401 4785 . + . ID=exon-FJM01_RS02445-1;Parent=rna-FJM01_RS02445;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=FJM01_RS02445;product=transfer-messenger RNA NZ_VFSY01000026.1 RefSeq gene 4967 5143 . + . ID=gene-FJM01_RS02450;Name=FJM01_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02450;old_locus_tag=FJM01_02450 NZ_VFSY01000026.1 Protein Homology CDS 4967 5143 . + 0 ID=cds-WP_124724512.1;Parent=gene-FJM01_RS02450;Dbxref=GenBank:WP_124724512.1;Name=WP_124724512.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021471.7;locus_tag=FJM01_RS02450;product=DUF2188 domain-containing protein;protein_id=WP_124724512.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 5145 6029 . + . ID=gene-FJM01_RS02455;Name=FJM01_RS02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02455;old_locus_tag=FJM01_02455 NZ_VFSY01000026.1 Protein Homology CDS 5145 6029 . + 0 ID=cds-WP_140701215.1;Parent=gene-FJM01_RS02455;Dbxref=GenBank:WP_140701215.1;Name=WP_140701215.1;Ontology_term=GO:0004488;gbkey=CDS;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: protein motif:HMM:NF014881.7;locus_tag=FJM01_RS02455;product=bifunctional 5%2C10-methylenetetrahydrofolate dehydrogenase/5%2C10-methenyltetrahydrofolate cyclohydrolase;protein_id=WP_140701215.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 6141 6797 . + . ID=gene-FJM01_RS02460;Name=FJM01_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02460;old_locus_tag=FJM01_02460 NZ_VFSY01000026.1 Protein Homology CDS 6141 6797 . + 0 ID=cds-WP_124724514.1;Parent=gene-FJM01_RS02460;Dbxref=GenBank:WP_124724514.1;Name=WP_124724514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054578.1;locus_tag=FJM01_RS02460;product=deoxynucleoside kinase;protein_id=WP_124724514.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 6833 7579 . - . ID=gene-FJM01_RS02465;Name=FJM01_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02465;old_locus_tag=FJM01_02465 NZ_VFSY01000026.1 GeneMarkS-2+ CDS 6833 7579 . - 0 ID=cds-WP_140701217.1;Parent=gene-FJM01_RS02465;Dbxref=GenBank:WP_140701217.1;Name=WP_140701217.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02465;product=hypothetical protein;protein_id=WP_140701217.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 7669 10773 . - . ID=gene-FJM01_RS02470;Name=FJM01_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02470;old_locus_tag=FJM01_02470 NZ_VFSY01000026.1 GeneMarkS-2+ CDS 7669 10773 . - 0 ID=cds-WP_140701219.1;Parent=gene-FJM01_RS02470;Dbxref=GenBank:WP_140701219.1;Name=WP_140701219.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02470;product=hypothetical protein;protein_id=WP_140701219.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 10775 12136 . - . ID=gene-FJM01_RS02475;Name=FJM01_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02475;old_locus_tag=FJM01_02475 NZ_VFSY01000026.1 GeneMarkS-2+ CDS 10775 12136 . - 0 ID=cds-WP_140701221.1;Parent=gene-FJM01_RS02475;Dbxref=GenBank:WP_140701221.1;Name=WP_140701221.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02475;product=hypothetical protein;protein_id=WP_140701221.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 12422 13225 . + . ID=gene-FJM01_RS02480;Name=FJM01_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02480;old_locus_tag=FJM01_02480 NZ_VFSY01000026.1 Protein Homology CDS 12422 13225 . + 0 ID=cds-WP_140701223.1;Parent=gene-FJM01_RS02480;Dbxref=GenBank:WP_140701223.1;Name=WP_140701223.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054387.1;locus_tag=FJM01_RS02480;product=energy-coupling factor transporter ATPase;protein_id=WP_140701223.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 13210 14220 . + . ID=gene-FJM01_RS02485;Name=FJM01_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02485;old_locus_tag=FJM01_02485 NZ_VFSY01000026.1 Protein Homology CDS 13210 14220 . + 0 ID=cds-WP_124724520.1;Parent=gene-FJM01_RS02485;Dbxref=GenBank:WP_124724520.1;Name=WP_124724520.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054176.1;locus_tag=FJM01_RS02485;product=ATP-binding cassette domain-containing protein;protein_id=WP_124724520.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 14230 15174 . + . ID=gene-FJM01_RS02490;Name=FJM01_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02490;old_locus_tag=FJM01_02490 NZ_VFSY01000026.1 Protein Homology CDS 14230 15174 . + 0 ID=cds-WP_124724521.1;Parent=gene-FJM01_RS02490;Dbxref=GenBank:WP_124724521.1;Name=WP_124724521.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF014420.7;locus_tag=FJM01_RS02490;product=energy-coupling factor transporter transmembrane component T family protein;protein_id=WP_124724521.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 15177 16895 . + . ID=gene-FJM01_RS02495;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=FJM01_RS02495;old_locus_tag=FJM01_02495 NZ_VFSY01000026.1 Protein Homology CDS 15177 16895 . + 0 ID=cds-WP_261368977.1;Parent=gene-FJM01_RS02495;Dbxref=GenBank:WP_261368977.1;Name=WP_261368977.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: protein motif:HMM:TIGR00575.1;locus_tag=FJM01_RS02495;product=NAD-dependent DNA ligase LigA;protein_id=WP_261368977.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 16954 17172 . + . ID=gene-FJM01_RS03495;Name=FJM01_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03495 NZ_VFSY01000026.1 Protein Homology CDS 16954 17172 . + 0 ID=cds-WP_334199159.1;Parent=gene-FJM01_RS03495;Dbxref=GenBank:WP_334199159.1;Name=WP_334199159.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012743.8;locus_tag=FJM01_RS03495;product=BRCT domain-containing protein;protein_id=WP_334199159.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 17634 18293 . - . ID=gene-FJM01_RS02505;Name=FJM01_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02505;old_locus_tag=FJM01_02505 NZ_VFSY01000026.1 Protein Homology CDS 17634 18293 . - 0 ID=cds-WP_186390764.1;Parent=gene-FJM01_RS02505;Dbxref=GenBank:WP_186390764.1;Name=WP_186390764.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015714.7;locus_tag=FJM01_RS02505;product=ComEC/Rec2 family competence protein;protein_id=WP_186390764.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 18418 18927 . - . ID=gene-FJM01_RS02510;Name=FJM01_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02510;old_locus_tag=FJM01_02510 NZ_VFSY01000026.1 Protein Homology CDS 18418 18927 . - 0 ID=cds-WP_140701227.1;Parent=gene-FJM01_RS02510;Dbxref=GenBank:WP_140701227.1;Name=WP_140701227.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045978.1;locus_tag=FJM01_RS02510;product=MAG0490 family ComEA-like DNA-binding protein;protein_id=WP_140701227.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 19000 19734 . - . ID=gene-FJM01_RS02515;Name=FJM01_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02515;old_locus_tag=FJM01_02515 NZ_VFSY01000026.1 Protein Homology CDS 19000 19734 . - 0 ID=cds-WP_140701229.1;Parent=gene-FJM01_RS02515;Dbxref=GenBank:WP_140701229.1;Name=WP_140701229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054704.1;locus_tag=FJM01_RS02515;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_140701229.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 19809 20639 . + . ID=gene-FJM01_RS02520;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=FJM01_RS02520;old_locus_tag=FJM01_02520 NZ_VFSY01000026.1 Protein Homology CDS 19809 20639 . + 0 ID=cds-WP_140701231.1;Parent=gene-FJM01_RS02520;Dbxref=GenBank:WP_140701231.1;Name=WP_140701231.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:TIGR01128.2;locus_tag=FJM01_RS02520;product=DNA polymerase III subunit delta;protein_id=WP_140701231.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 20599 20766 . + . ID=gene-FJM01_RS03270;Name=FJM01_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03270 NZ_VFSY01000026.1 Protein Homology CDS 20599 20766 . + 0 ID=cds-WP_186390765.1;Parent=gene-FJM01_RS03270;Dbxref=GenBank:WP_186390765.1;Name=WP_186390765.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF044544.4;locus_tag=FJM01_RS03270;product=hypothetical protein;protein_id=WP_186390765.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 20776 22311 . + . ID=gene-FJM01_RS02525;Name=FJM01_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02525;old_locus_tag=FJM01_02525 NZ_VFSY01000026.1 Protein Homology CDS 20776 22311 . + 0 ID=cds-WP_140701233.1;Parent=gene-FJM01_RS02525;Dbxref=GenBank:WP_140701233.1;Name=WP_140701233.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF012356.8;locus_tag=FJM01_RS02525;product=alpha-amylase family glycosyl hydrolase;protein_id=WP_140701233.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 22361 22930 . + . ID=gene-FJM01_RS02530;Name=FJM01_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02530;old_locus_tag=FJM01_02530 NZ_VFSY01000026.1 Protein Homology CDS 22361 22930 . + 0 ID=cds-WP_124724529.1;Parent=gene-FJM01_RS02530;Dbxref=GenBank:WP_124724529.1;Name=WP_124724529.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045939.1;locus_tag=FJM01_RS02530;product=MHJ_0274 family protein;protein_id=WP_124724529.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 22923 23603 . + . ID=gene-FJM01_RS02535;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=FJM01_RS02535;old_locus_tag=FJM01_02535 NZ_VFSY01000026.1 Protein Homology CDS 22923 23603 . + 0 ID=cds-WP_124724530.1;Parent=gene-FJM01_RS02535;Dbxref=GenBank:WP_124724530.1;Name=WP_124724530.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: protein motif:HMM:NF013250.7;locus_tag=FJM01_RS02535;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_124724530.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 23745 24557 . + . ID=gene-FJM01_RS02540;Name=FJM01_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02540;old_locus_tag=FJM01_02540 NZ_VFSY01000026.1 GeneMarkS-2+ CDS 23745 24557 . + 0 ID=cds-WP_140701235.1;Parent=gene-FJM01_RS02540;Dbxref=GenBank:WP_140701235.1;Name=WP_140701235.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02540;product=hypothetical protein;protein_id=WP_140701235.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 24878 25114 . + . ID=gene-FJM01_RS02545;Name=FJM01_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02545;old_locus_tag=FJM01_02545 NZ_VFSY01000026.1 GeneMarkS-2+ CDS 24878 25114 . + 0 ID=cds-WP_140701237.1;Parent=gene-FJM01_RS02545;Dbxref=GenBank:WP_140701237.1;Name=WP_140701237.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02545;product=hypothetical protein;protein_id=WP_140701237.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 25603 25755 . + . ID=gene-FJM01_RS02550;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=FJM01_RS02550;old_locus_tag=FJM01_02550 NZ_VFSY01000026.1 Protein Homology CDS 25603 25755 . + 0 ID=cds-WP_140701239.1;Parent=gene-FJM01_RS02550;Dbxref=GenBank:WP_140701239.1;Name=WP_140701239.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054705.1;locus_tag=FJM01_RS02550;product=50S ribosomal protein L33;protein_id=WP_140701239.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 25774 26805 . + . ID=gene-FJM01_RS02555;Name=FJM01_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02555;old_locus_tag=FJM01_02555 NZ_VFSY01000026.1 Protein Homology CDS 25774 26805 . + 0 ID=cds-WP_140701241.1;Parent=gene-FJM01_RS02555;Dbxref=GenBank:WP_140701241.1;Name=WP_140701241.1;Ontology_term=GO:0006508,GO:0004177,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054651.1;locus_tag=FJM01_RS02555;product=aminopeptidase P family protein;protein_id=WP_140701241.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 26818 27702 . - . ID=gene-FJM01_RS02560;Name=FJM01_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02560;old_locus_tag=FJM01_02560 NZ_VFSY01000026.1 Protein Homology CDS 26818 27702 . - 0 ID=cds-WP_140701243.1;Parent=gene-FJM01_RS02560;Dbxref=GenBank:WP_140701243.1;Name=WP_140701243.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054434.1;locus_tag=FJM01_RS02560;product=deoxyribonuclease IV;protein_id=WP_140701243.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 27759 28034 . - . ID=gene-FJM01_RS02565;Name=FJM01_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02565;old_locus_tag=FJM01_02565 NZ_VFSY01000026.1 GeneMarkS-2+ CDS 27759 28034 . - 0 ID=cds-WP_124724536.1;Parent=gene-FJM01_RS02565;Dbxref=GenBank:WP_124724536.1;Name=WP_124724536.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02565;product=hypothetical protein;protein_id=WP_124724536.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 28121 29695 . - . ID=gene-FJM01_RS02570;Name=FJM01_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02570;old_locus_tag=FJM01_02570 NZ_VFSY01000026.1 Protein Homology CDS 28121 29695 . - 0 ID=cds-WP_140701245.1;Parent=gene-FJM01_RS02570;Dbxref=GenBank:WP_140701245.1;Name=WP_140701245.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF004565.0;locus_tag=FJM01_RS02570;product=RNA polymerase sigma factor;protein_id=WP_140701245.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 29685 31544 . - . ID=gene-FJM01_RS02575;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=FJM01_RS02575;old_locus_tag=FJM01_02575 NZ_VFSY01000026.1 Protein Homology CDS 29685 31544 . - 0 ID=cds-WP_140701247.1;Parent=gene-FJM01_RS02575;Dbxref=GenBank:WP_140701247.1;Name=WP_140701247.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: protein motif:HMM:TIGR01391.1;locus_tag=FJM01_RS02575;product=DNA primase;protein_id=WP_140701247.1;transl_table=4 NZ_VFSY01000026.1 RefSeq gene 31564 32152 . - . ID=gene-FJM01_RS02580;Name=FJM01_RS02580;end_range=32152,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02580;old_locus_tag=FJM01_02580;partial=true NZ_VFSY01000026.1 Protein Homology CDS 31564 32152 . - 1 ID=cds-WP_261368978.1;Parent=gene-FJM01_RS02580;Dbxref=GenBank:WP_261368978.1;Name=WP_261368978.1;end_range=32152,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054718.1;locus_tag=FJM01_RS02580;partial=true;product=His/Gly/Thr/Pro-type tRNA ligase C-terminal domain-containing protein;protein_id=WP_261368978.1;transl_table=4 ##sequence-region NZ_VFSY01000004.1 1 8579 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000004.1 RefSeq region 1 8579 . + . ID=NZ_VFSY01000004.1:1..8579;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000004.1 RefSeq gene 1 6022 . - . ID=gene-FJM01_RS00215;Name=FJM01_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00215;old_locus_tag=FJM01_00215;partial=true;start_range=.,1 NZ_VFSY01000004.1 GeneMarkS-2+ CDS 1 6022 . - 0 ID=cds-WP_140700860.1;Parent=gene-FJM01_RS00215;Dbxref=GenBank:WP_140700860.1;Name=WP_140700860.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00215;partial=true;product=rhoptry family protein;protein_id=WP_140700860.1;start_range=.,1;transl_table=4 NZ_VFSY01000004.1 RefSeq gene 6010 7734 . - . ID=gene-FJM01_RS00220;Name=FJM01_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00220;old_locus_tag=FJM01_00220 NZ_VFSY01000004.1 GeneMarkS-2+ CDS 6010 7734 . - 0 ID=cds-WP_140700861.1;Parent=gene-FJM01_RS00220;Dbxref=GenBank:WP_140700861.1;Name=WP_140700861.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00220;product=hypothetical protein;protein_id=WP_140700861.1;transl_table=4 NZ_VFSY01000004.1 RefSeq gene 7855 8046 . - . ID=gene-FJM01_RS00225;Name=FJM01_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00225;old_locus_tag=FJM01_00225 NZ_VFSY01000004.1 GeneMarkS-2+ CDS 7855 8046 . - 0 ID=cds-WP_140700862.1;Parent=gene-FJM01_RS00225;Dbxref=GenBank:WP_140700862.1;Name=WP_140700862.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00225;product=hypothetical protein;protein_id=WP_140700862.1;transl_table=4 NZ_VFSY01000004.1 RefSeq gene 8319 8579 . - . ID=gene-FJM01_RS03210;Name=FJM01_RS03210;end_range=8579,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03210;partial=true NZ_VFSY01000004.1 GeneMarkS-2+ CDS 8319 8579 . - 0 ID=cds-WP_186390739.1;Parent=gene-FJM01_RS03210;Dbxref=GenBank:WP_186390739.1;Name=WP_186390739.1;end_range=8579,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03210;partial=true;product=hypothetical protein;protein_id=WP_186390739.1;transl_table=4 ##sequence-region NZ_VFSY01000016.1 1 32836 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000016.1 RefSeq region 1 32836 . + . ID=NZ_VFSY01000016.1:1..32836;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000016.1 RefSeq gene 193 1143 . - . ID=gene-FJM01_RS00490;Name=FJM01_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00490;old_locus_tag=FJM01_00490 NZ_VFSY01000016.1 Protein Homology CDS 193 1143 . - 0 ID=cds-WP_140700903.1;Parent=gene-FJM01_RS00490;Dbxref=GenBank:WP_140700903.1;Name=WP_140700903.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054153.1;locus_tag=FJM01_RS00490;product=ABC transporter permease;protein_id=WP_140700903.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 1133 1414 . - . ID=gene-FJM01_RS00495;Name=FJM01_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00495;old_locus_tag=FJM01_00495 NZ_VFSY01000016.1 GeneMarkS-2+ CDS 1133 1414 . - 0 ID=cds-WP_140700904.1;Parent=gene-FJM01_RS00495;Dbxref=GenBank:WP_140700904.1;Name=WP_140700904.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00495;product=hypothetical protein;protein_id=WP_140700904.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 1356 3116 . - . ID=gene-FJM01_RS00500;Name=FJM01_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00500;old_locus_tag=FJM01_00500 NZ_VFSY01000016.1 Protein Homology CDS 1356 3116 . - 0 ID=cds-WP_140700905.1;Parent=gene-FJM01_RS00500;Dbxref=GenBank:WP_140700905.1;Name=WP_140700905.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF014684.7;locus_tag=FJM01_RS00500;product=ABC transporter permease;protein_id=WP_140700905.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 3116 4423 . - . ID=gene-FJM01_RS03545;Name=FJM01_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03545;old_locus_tag=FJM01_00505 NZ_VFSY01000016.1 Protein Homology CDS 3116 4423 . - 0 ID=cds-WP_334199133.1;Parent=gene-FJM01_RS03545;Dbxref=GenBank:WP_334199133.1;Name=WP_334199133.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=FJM01_RS03545;product=ATP-binding cassette domain-containing protein;protein_id=WP_334199133.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 4398 4970 . - . ID=gene-FJM01_RS03550;Name=FJM01_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03550 NZ_VFSY01000016.1 Protein Homology CDS 4398 4970 . - 0 ID=cds-WP_334199134.1;Parent=gene-FJM01_RS03550;Dbxref=GenBank:WP_334199134.1;Name=WP_334199134.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=FJM01_RS03550;product=ATP-binding cassette domain-containing protein;protein_id=WP_334199134.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 4994 5290 . - . ID=gene-FJM01_RS00510;Name=FJM01_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00510;old_locus_tag=FJM01_00510 NZ_VFSY01000016.1 GeneMarkS-2+ CDS 4994 5290 . - 0 ID=cds-WP_186390746.1;Parent=gene-FJM01_RS00510;Dbxref=GenBank:WP_186390746.1;Name=WP_186390746.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00510;product=hypothetical protein;protein_id=WP_186390746.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 5262 6347 . - . ID=gene-FJM01_RS00515;Name=FJM01_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00515;old_locus_tag=FJM01_00515 NZ_VFSY01000016.1 Protein Homology CDS 5262 6347 . - 0 ID=cds-WP_140700907.1;Parent=gene-FJM01_RS00515;Dbxref=GenBank:WP_140700907.1;Name=WP_140700907.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: protein motif:HMM:NF014647.7;locus_tag=FJM01_RS00515;product=BMP family ABC transporter substrate-binding protein;protein_id=WP_140700907.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 6579 7442 . - . ID=gene-FJM01_RS00520;Name=FJM01_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00520;old_locus_tag=FJM01_00520 NZ_VFSY01000016.1 GeneMarkS-2+ CDS 6579 7442 . - 0 ID=cds-WP_140700908.1;Parent=gene-FJM01_RS00520;Dbxref=GenBank:WP_140700908.1;Name=WP_140700908.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00520;product=ECF transporter S component;protein_id=WP_140700908.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 7543 8919 . - . ID=gene-FJM01_RS00525;Name=FJM01_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00525;old_locus_tag=FJM01_00525 NZ_VFSY01000016.1 Protein Homology CDS 7543 8919 . - 0 ID=cds-WP_124724191.1;Parent=gene-FJM01_RS00525;Dbxref=GenBank:WP_124724191.1;Name=WP_124724191.1;Ontology_term=GO:0006508,GO:0046872,GO:0070006;gbkey=CDS;go_function=metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054603.1;locus_tag=FJM01_RS00525;product=M17 family metallopeptidase;protein_id=WP_124724191.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 8924 10300 . - . ID=gene-FJM01_RS00530;Name=FJM01_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00530;old_locus_tag=FJM01_00530 NZ_VFSY01000016.1 Protein Homology CDS 8924 10300 . - 0 ID=cds-WP_140700909.1;Parent=gene-FJM01_RS00530;Dbxref=GenBank:WP_140700909.1;Name=WP_140700909.1;Ontology_term=GO:0019538,GO:0046872,GO:0070006;gbkey=CDS;go_function=metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054519.1;locus_tag=FJM01_RS00530;product=M17 family metallopeptidase;protein_id=WP_140700909.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 10513 12237 . - . ID=gene-FJM01_RS00535;Name=FJM01_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00535;old_locus_tag=FJM01_00535 NZ_VFSY01000016.1 GeneMarkS-2+ CDS 10513 12237 . - 0 ID=cds-WP_140700910.1;Parent=gene-FJM01_RS00535;Dbxref=GenBank:WP_140700910.1;Name=WP_140700910.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00535;product=hypothetical protein;protein_id=WP_140700910.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 12298 12945 . - . ID=gene-FJM01_RS00540;Name=FJM01_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00540;old_locus_tag=FJM01_00540 NZ_VFSY01000016.1 Protein Homology CDS 12298 12945 . - 0 ID=cds-WP_140700911.1;Parent=gene-FJM01_RS00540;Dbxref=GenBank:WP_140700911.1;Name=WP_140700911.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: protein motif:HMM:NF003592.0;locus_tag=FJM01_RS00540;product=uracil-DNA glycosylase;protein_id=WP_140700911.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 12935 13795 . - . ID=gene-FJM01_RS00545;Name=FJM01_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00545;old_locus_tag=FJM01_00545 NZ_VFSY01000016.1 Protein Homology CDS 12935 13795 . - 0 ID=cds-WP_140700912.1;Parent=gene-FJM01_RS00545;Dbxref=GenBank:WP_140700912.1;Name=WP_140700912.1;Ontology_term=GO:0071951,GO:0004479;gbkey=CDS;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: protein motif:HMM:NF012760.7;locus_tag=FJM01_RS00545;product=methionyl-tRNA formyltransferase;protein_id=WP_140700912.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 13849 14334 . - . ID=gene-FJM01_RS03355;Name=FJM01_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03355;old_locus_tag=FJM01_00550 NZ_VFSY01000016.1 Protein Homology CDS 13849 14334 . - 0 ID=cds-WP_334199135.1;Parent=gene-FJM01_RS03355;Dbxref=GenBank:WP_334199135.1;Name=WP_334199135.1;Ontology_term=GO:0006654,GO:0008654,GO:0043772,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=acyl-phosphate glycerol-3-phosphate acyltransferase activity|0043772||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: protein motif:HMM:NF014690.7;locus_tag=FJM01_RS03355;product=glycerol-3-phosphate acyltransferase;protein_id=WP_334199135.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 14268 14516 . - . ID=gene-FJM01_RS03360;Name=FJM01_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03360 NZ_VFSY01000016.1 Protein Homology CDS 14268 14516 . - 0 ID=cds-WP_261368931.1;Parent=gene-FJM01_RS03360;Dbxref=GenBank:WP_261368931.1;Name=WP_261368931.1;Ontology_term=GO:0006654,GO:0008654,GO:0043772;gbkey=CDS;go_function=acyl-phosphate glycerol-3-phosphate acyltransferase activity|0043772||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: protein motif:HMM:NF014690.7;locus_tag=FJM01_RS03360;product=glycerol-3-phosphate acyltransferase;protein_id=WP_261368931.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 14556 14948 . - . ID=gene-FJM01_RS00555;Name=FJM01_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00555;old_locus_tag=FJM01_00555 NZ_VFSY01000016.1 GeneMarkS-2+ CDS 14556 14948 . - 0 ID=cds-WP_140700913.1;Parent=gene-FJM01_RS00555;Dbxref=GenBank:WP_140700913.1;Name=WP_140700913.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00555;product=hypothetical protein;protein_id=WP_140700913.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 14939 16327 . - . ID=gene-FJM01_RS00560;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=FJM01_RS00560;old_locus_tag=FJM01_00560 NZ_VFSY01000016.1 Protein Homology CDS 14939 16327 . - 0 ID=cds-WP_140700914.1;Parent=gene-FJM01_RS00560;Dbxref=GenBank:WP_140700914.1;Name=WP_140700914.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054231.1;locus_tag=FJM01_RS00560;product=glutamate--tRNA ligase;protein_id=WP_140700914.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 16343 17182 . - . ID=gene-FJM01_RS00565;Name=FJM01_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00565;old_locus_tag=FJM01_00565 NZ_VFSY01000016.1 GeneMarkS-2+ CDS 16343 17182 . - 0 ID=cds-WP_140700915.1;Parent=gene-FJM01_RS00565;Dbxref=GenBank:WP_140700915.1;Name=WP_140700915.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00565;product=hypothetical protein;protein_id=WP_140700915.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 17316 18839 . + . ID=gene-FJM01_RS00570;Name=FJM01_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00570;old_locus_tag=FJM01_00570 NZ_VFSY01000016.1 Protein Homology CDS 17316 18839 . + 0 ID=cds-WP_261368937.1;Parent=gene-FJM01_RS00570;Dbxref=GenBank:WP_261368937.1;Name=WP_261368937.1;Ontology_term=GO:0006508,GO:0005524,GO:0008233,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF015377.7;locus_tag=FJM01_RS00570;product=cysteine peptidase family C39 domain-containing protein;protein_id=WP_261368937.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 18871 19344 . + . ID=gene-FJM01_RS00575;Name=FJM01_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00575;old_locus_tag=FJM01_00575 NZ_VFSY01000016.1 Protein Homology CDS 18871 19344 . + 0 ID=cds-WP_261368938.1;Parent=gene-FJM01_RS00575;Dbxref=GenBank:WP_261368938.1;Name=WP_261368938.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=FJM01_RS00575;product=ATP-binding cassette domain-containing protein;protein_id=WP_261368938.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 19395 19847 . + . ID=gene-FJM01_RS00580;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=FJM01_RS00580;old_locus_tag=FJM01_00580 NZ_VFSY01000016.1 Protein Homology CDS 19395 19847 . + 0 ID=cds-WP_140700918.1;Parent=gene-FJM01_RS00580;Dbxref=GenBank:WP_140700918.1;Name=WP_140700918.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054294.1;locus_tag=FJM01_RS00580;product=rRNA maturation RNase YbeY;protein_id=WP_140700918.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 19862 20689 . + . ID=gene-FJM01_RS00585;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=FJM01_RS00585;old_locus_tag=FJM01_00585 NZ_VFSY01000016.1 Protein Homology CDS 19862 20689 . + 0 ID=cds-WP_261368932.1;Parent=gene-FJM01_RS00585;Dbxref=GenBank:WP_261368932.1;Name=WP_261368932.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: protein motif:HMM:NF000908.1;locus_tag=FJM01_RS00585;product=GTPase Era;protein_id=WP_261368932.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 20753 22369 . + . ID=gene-FJM01_RS00590;Name=FJM01_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00590;old_locus_tag=FJM01_00590 NZ_VFSY01000016.1 GeneMarkS-2+ CDS 20753 22369 . + 0 ID=cds-WP_245979681.1;Parent=gene-FJM01_RS00590;Dbxref=GenBank:WP_245979681.1;Name=WP_245979681.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00590;product=hypothetical protein;protein_id=WP_245979681.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 22393 22803 . + . ID=gene-FJM01_RS03555;Name=FJM01_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03555 NZ_VFSY01000016.1 Protein Homology CDS 22393 22803 . + 0 ID=cds-WP_222400903.1;Parent=gene-FJM01_RS03555;Dbxref=GenBank:WP_222400903.1;Name=WP_222400903.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012235.7;locus_tag=FJM01_RS03555;product=ATP-binding cassette domain-containing protein;protein_id=WP_222400903.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 22823 23779 . + . ID=gene-FJM01_RS00595;Name=FJM01_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00595;old_locus_tag=FJM01_00595 NZ_VFSY01000016.1 Protein Homology CDS 22823 23779 . + 0 ID=cds-WP_222400904.1;Parent=gene-FJM01_RS00595;Dbxref=GenBank:WP_222400904.1;Name=WP_222400904.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429008.1;locus_tag=FJM01_RS00595;product=ABC transporter ATP-binding protein;protein_id=WP_222400904.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 23763 24653 . + . ID=gene-FJM01_RS00600;Name=FJM01_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00600;old_locus_tag=FJM01_00600 NZ_VFSY01000016.1 Protein Homology CDS 23763 24653 . + 0 ID=cds-WP_140700919.1;Parent=gene-FJM01_RS00600;Dbxref=GenBank:WP_140700919.1;Name=WP_140700919.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012738.7;locus_tag=FJM01_RS00600;product=ABC transporter permease;protein_id=WP_140700919.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 24646 25497 . + . ID=gene-FJM01_RS00605;Name=FJM01_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00605;old_locus_tag=FJM01_00605 NZ_VFSY01000016.1 Protein Homology CDS 24646 25497 . + 0 ID=cds-WP_124724208.1;Parent=gene-FJM01_RS00605;Dbxref=GenBank:WP_124724208.1;Name=WP_124724208.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054462.1;locus_tag=FJM01_RS00605;product=ABC transporter permease;protein_id=WP_124724208.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 25505 25948 . + . ID=gene-FJM01_RS03365;Name=FJM01_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03365 NZ_VFSY01000016.1 GeneMarkS-2+ CDS 25505 25948 . + 0 ID=cds-WP_261368933.1;Parent=gene-FJM01_RS03365;Dbxref=GenBank:WP_261368933.1;Name=WP_261368933.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03365;product=hypothetical protein;protein_id=WP_261368933.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 26229 27305 . + . ID=gene-FJM01_RS03370;Name=FJM01_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03370 NZ_VFSY01000016.1 GeneMarkS-2+ CDS 26229 27305 . + 0 ID=cds-WP_261368934.1;Parent=gene-FJM01_RS03370;Dbxref=GenBank:WP_261368934.1;Name=WP_261368934.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03370;product=hypothetical protein;protein_id=WP_261368934.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 27690 29036 . + . ID=gene-FJM01_RS00615;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=FJM01_RS00615;old_locus_tag=FJM01_00615 NZ_VFSY01000016.1 Protein Homology CDS 27690 29036 . + 0 ID=cds-WP_124724209.1;Parent=gene-FJM01_RS00615;Dbxref=GenBank:WP_124724209.1;Name=WP_124724209.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362895.1;locus_tag=FJM01_RS00615;product=asparagine--tRNA ligase;protein_id=WP_124724209.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 29043 30056 . + . ID=gene-FJM01_RS00620;Name=FJM01_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00620;old_locus_tag=FJM01_00620 NZ_VFSY01000016.1 GeneMarkS-2+ CDS 29043 30056 . + 0 ID=cds-WP_140700920.1;Parent=gene-FJM01_RS00620;Dbxref=GenBank:WP_140700920.1;Name=WP_140700920.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00620;product=glycosyltransferase family protein;protein_id=WP_140700920.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 30050 30703 . + . ID=gene-FJM01_RS00625;Name=FJM01_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00625;old_locus_tag=FJM01_00625 NZ_VFSY01000016.1 Protein Homology CDS 30050 30703 . + 0 ID=cds-WP_140700921.1;Parent=gene-FJM01_RS00625;Dbxref=GenBank:WP_140700921.1;Name=WP_140700921.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018028.8;locus_tag=FJM01_RS00625;product=RDD family protein;protein_id=WP_140700921.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 30795 31298 . + . ID=gene-FJM01_RS03375;Name=FJM01_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03375 NZ_VFSY01000016.1 Protein Homology CDS 30795 31298 . + 0 ID=cds-WP_261368935.1;Parent=gene-FJM01_RS03375;Dbxref=GenBank:WP_261368935.1;Name=WP_261368935.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012789.7;locus_tag=FJM01_RS03375;product=UvrD-helicase domain-containing protein;protein_id=WP_261368935.1;transl_table=4 NZ_VFSY01000016.1 RefSeq gene 31228 32836 . + . ID=gene-FJM01_RS00630;Name=FJM01_RS00630;end_range=32836,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00630;old_locus_tag=FJM01_00630;partial=true NZ_VFSY01000016.1 Protein Homology CDS 31228 32836 . + 0 ID=cds-WP_334199136.1;Parent=gene-FJM01_RS00630;Dbxref=GenBank:WP_334199136.1;Name=WP_334199136.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524,GO:0016853,GO:0016887;end_range=32836,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,isomerase activity|0016853||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF024754.7;locus_tag=FJM01_RS00630;partial=true;product=ATP-dependent helicase;protein_id=WP_334199136.1;transl_table=4 ##sequence-region NZ_VFSY01000007.1 1 29507 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000007.1 RefSeq region 1 29507 . + . ID=NZ_VFSY01000007.1:1..29507;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000007.1 RefSeq gene 1 1112 . - . ID=gene-FJM01_RS00230;Name=FJM01_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00230;old_locus_tag=FJM01_00230;partial=true;start_range=.,1 NZ_VFSY01000007.1 GeneMarkS-2+ CDS 1 1112 . - 0 ID=cds-WP_140700863.1;Parent=gene-FJM01_RS00230;Dbxref=GenBank:WP_140700863.1;Name=WP_140700863.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00230;partial=true;product=hypothetical protein;protein_id=WP_140700863.1;start_range=.,1;transl_table=4 NZ_VFSY01000007.1 RefSeq gene 1411 3576 . - . ID=gene-FJM01_RS00235;Name=FJM01_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00235;old_locus_tag=FJM01_00235 NZ_VFSY01000007.1 GeneMarkS-2+ CDS 1411 3576 . - 0 ID=cds-WP_140700864.1;Parent=gene-FJM01_RS00235;Dbxref=GenBank:WP_140700864.1;Name=WP_140700864.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00235;product=hypothetical protein;protein_id=WP_140700864.1;transl_table=4 NZ_VFSY01000007.1 RefSeq gene 3641 4114 . - . ID=gene-FJM01_RS00240;Name=FJM01_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00240;old_locus_tag=FJM01_00240 NZ_VFSY01000007.1 GeneMarkS-2+ CDS 3641 4114 . - 0 ID=cds-WP_140700865.1;Parent=gene-FJM01_RS00240;Dbxref=GenBank:WP_140700865.1;Name=WP_140700865.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00240;product=hypothetical protein;protein_id=WP_140700865.1;transl_table=4 NZ_VFSY01000007.1 RefSeq gene 4020 6998 . - . ID=gene-FJM01_RS00245;Name=FJM01_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00245;old_locus_tag=FJM01_00245 NZ_VFSY01000007.1 GeneMarkS-2+ CDS 4020 6998 . - 0 ID=cds-WP_140700866.1;Parent=gene-FJM01_RS00245;Dbxref=GenBank:WP_140700866.1;Name=WP_140700866.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00245;product=hypothetical protein;protein_id=WP_140700866.1;transl_table=4 NZ_VFSY01000007.1 RefSeq gene 6961 7347 . - . ID=gene-FJM01_RS00250;Name=FJM01_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00250;old_locus_tag=FJM01_00250 NZ_VFSY01000007.1 GeneMarkS-2+ CDS 6961 7347 . - 0 ID=cds-WP_140700867.1;Parent=gene-FJM01_RS00250;Dbxref=GenBank:WP_140700867.1;Name=WP_140700867.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00250;product=hypothetical protein;protein_id=WP_140700867.1;transl_table=4 NZ_VFSY01000007.1 RefSeq gene 7553 9055 . - . ID=gene-FJM01_RS00255;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;locus_tag=FJM01_RS00255;old_locus_tag=FJM01_00255 NZ_VFSY01000007.1 Protein Homology CDS 7553 9055 . - 0 ID=cds-WP_140700868.1;Parent=gene-FJM01_RS00255;Dbxref=GenBank:WP_140700868.1;Name=WP_140700868.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmI;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054150.1;locus_tag=FJM01_RS00255;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WP_140700868.1;transl_table=4 NZ_VFSY01000007.1 RefSeq gene 9355 12042 . + . ID=gene-FJM01_RS00260;Name=FJM01_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00260;old_locus_tag=FJM01_00260 NZ_VFSY01000007.1 Protein Homology CDS 9355 12042 . + 0 ID=cds-WP_140700869.1;Parent=gene-FJM01_RS00260;Dbxref=GenBank:WP_140700869.1;Name=WP_140700869.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017745.7;locus_tag=FJM01_RS00260;product=DUF885 family protein;protein_id=WP_140700869.1;transl_table=4 NZ_VFSY01000007.1 RefSeq gene 12086 12910 . - . ID=gene-FJM01_RS00265;Name=FJM01_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00265;old_locus_tag=FJM01_00265 NZ_VFSY01000007.1 GeneMarkS-2+ CDS 12086 12910 . - 0 ID=cds-WP_140700870.1;Parent=gene-FJM01_RS00265;Dbxref=GenBank:WP_140700870.1;Name=WP_140700870.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00265;product=hypothetical protein;protein_id=WP_140700870.1;transl_table=4 NZ_VFSY01000007.1 RefSeq gene 12912 14405 . - . ID=gene-FJM01_RS00270;Name=FJM01_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00270;old_locus_tag=FJM01_00270 NZ_VFSY01000007.1 GeneMarkS-2+ CDS 12912 14405 . - 0 ID=cds-WP_261368924.1;Parent=gene-FJM01_RS00270;Dbxref=GenBank:WP_261368924.1;Name=WP_261368924.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00270;product=protein kinase family protein;protein_id=WP_261368924.1;transl_table=4 NZ_VFSY01000007.1 RefSeq gene 14398 15147 . - . ID=gene-FJM01_RS00275;Name=FJM01_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00275;old_locus_tag=FJM01_00275 NZ_VFSY01000007.1 GeneMarkS-2+ CDS 14398 15147 . - 0 ID=cds-WP_124724136.1;Parent=gene-FJM01_RS00275;Dbxref=GenBank:WP_124724136.1;Name=WP_124724136.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00275;product=phosphotransferase;protein_id=WP_124724136.1;transl_table=4 NZ_VFSY01000007.1 RefSeq gene 15150 17093 . - . ID=gene-FJM01_RS00280;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=FJM01_RS00280;old_locus_tag=FJM01_00280 NZ_VFSY01000007.1 Protein Homology CDS 15150 17093 . - 0 ID=cds-WP_140700871.1;Parent=gene-FJM01_RS00280;Dbxref=GenBank:WP_140700871.1;Name=WP_140700871.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005683363.1;locus_tag=FJM01_RS00280;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_140700871.1;transl_table=4 NZ_VFSY01000007.1 RefSeq gene 17199 17873 . - . ID=gene-FJM01_RS00285;Name=FJM01_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00285;old_locus_tag=FJM01_00285 NZ_VFSY01000007.1 Protein Homology CDS 17199 17873 . - 0 ID=cds-WP_124724138.1;Parent=gene-FJM01_RS00285;Dbxref=GenBank:WP_124724138.1;Name=WP_124724138.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: protein motif:HMM:NF015944.7;locus_tag=FJM01_RS00285;product=LemA family protein;protein_id=WP_124724138.1;transl_table=4 NZ_VFSY01000007.1 RefSeq gene 17894 19690 . - . ID=gene-FJM01_RS00290;Name=FJM01_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00290;old_locus_tag=FJM01_00290 NZ_VFSY01000007.1 GeneMarkS-2+ CDS 17894 19690 . - 0 ID=cds-WP_140700872.1;Parent=gene-FJM01_RS00290;Dbxref=GenBank:WP_140700872.1;Name=WP_140700872.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00290;product=hypothetical protein;protein_id=WP_140700872.1;transl_table=4 NZ_VFSY01000007.1 RefSeq gene 19758 19937 . - . ID=gene-FJM01_RS00295;Name=FJM01_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00295;old_locus_tag=FJM01_00295 NZ_VFSY01000007.1 GeneMarkS-2+ CDS 19758 19937 . - 0 ID=cds-WP_140700873.1;Parent=gene-FJM01_RS00295;Dbxref=GenBank:WP_140700873.1;Name=WP_140700873.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00295;product=hypothetical protein;protein_id=WP_140700873.1;transl_table=4 NZ_VFSY01000007.1 RefSeq gene 20050 20178 . - . ID=gene-FJM01_RS03345;Name=FJM01_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03345 NZ_VFSY01000007.1 GeneMarkS-2+ CDS 20050 20178 . - 0 ID=cds-WP_261368925.1;Parent=gene-FJM01_RS03345;Dbxref=GenBank:WP_261368925.1;Name=WP_261368925.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03345;product=hypothetical protein;protein_id=WP_261368925.1;transl_table=4 NZ_VFSY01000007.1 RefSeq gene 20156 20911 . - . ID=gene-FJM01_RS00300;Name=FJM01_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00300;old_locus_tag=FJM01_00300 NZ_VFSY01000007.1 GeneMarkS-2+ CDS 20156 20911 . - 0 ID=cds-WP_140700874.1;Parent=gene-FJM01_RS00300;Dbxref=GenBank:WP_140700874.1;Name=WP_140700874.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00300;product=hypothetical protein;protein_id=WP_140700874.1;transl_table=4 NZ_VFSY01000007.1 RefSeq gene 20901 22553 . - . ID=gene-FJM01_RS00305;Name=FJM01_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00305;old_locus_tag=FJM01_00305 NZ_VFSY01000007.1 Protein Homology CDS 20901 22553 . - 0 ID=cds-WP_140700875.1;Parent=gene-FJM01_RS00305;Dbxref=GenBank:WP_140700875.1;Name=WP_140700875.1;Ontology_term=GO:0006364,GO:0003723,GO:0004521,GO:0004534,GO:0046872;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA,5'-3' RNA exonuclease activity|0004534||IEA,metal ion binding|0046872||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: protein motif:HMM:NF036802.7;locus_tag=FJM01_RS00305;product=ribonuclease J;protein_id=WP_140700875.1;transl_table=4 NZ_VFSY01000007.1 RefSeq gene 22752 23258 . + . ID=gene-FJM01_RS00310;Name=FJM01_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00310;old_locus_tag=FJM01_00310 NZ_VFSY01000007.1 Protein Homology CDS 22752 23258 . + 0 ID=cds-WP_140700876.1;Parent=gene-FJM01_RS00310;Dbxref=GenBank:WP_140700876.1;Name=WP_140700876.1;Ontology_term=GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054436.1;locus_tag=FJM01_RS00310;product=adenine phosphoribosyltransferase;protein_id=WP_140700876.1;transl_table=4 NZ_VFSY01000007.1 RefSeq gene 23262 24935 . + . ID=gene-FJM01_RS00315;Name=FJM01_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00315;old_locus_tag=FJM01_00315 NZ_VFSY01000007.1 Protein Homology CDS 23262 24935 . + 0 ID=cds-WP_261368926.1;Parent=gene-FJM01_RS00315;Dbxref=GenBank:WP_261368926.1;Name=WP_261368926.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF013591.7;locus_tag=FJM01_RS00315;product=M3 family metallopeptidase;protein_id=WP_261368926.1;transl_table=4 NZ_VFSY01000007.1 RefSeq gene 25219 28902 . + . ID=gene-FJM01_RS00320;Name=FJM01_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00320;old_locus_tag=FJM01_00320 NZ_VFSY01000007.1 GeneMarkS-2+ CDS 25219 28902 . + 0 ID=cds-WP_140700877.1;Parent=gene-FJM01_RS00320;Dbxref=GenBank:WP_140700877.1;Name=WP_140700877.1;Ontology_term=GO:0005975,GO:0004308;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00320;product=sialidase family protein;protein_id=WP_140700877.1;transl_table=4 NZ_VFSY01000007.1 RefSeq gene 28956 29378 . + . ID=gene-FJM01_RS00325;Name=FJM01_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00325;old_locus_tag=FJM01_00325 NZ_VFSY01000007.1 Protein Homology CDS 28956 29378 . + 0 ID=cds-WP_222400899.1;Parent=gene-FJM01_RS00325;Dbxref=GenBank:WP_222400899.1;Name=WP_222400899.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033817.2;locus_tag=FJM01_RS00325;product=variable surface lipoprotein;protein_id=WP_222400899.1;transl_table=4 ##sequence-region NZ_VFSY01000002.1 1 12908 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000002.1 RefSeq region 1 12908 . + . ID=NZ_VFSY01000002.1:1..12908;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000002.1 RefSeq gene 161 5776 . - . ID=gene-FJM01_RS00125;Name=FJM01_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00125;old_locus_tag=FJM01_00125 NZ_VFSY01000002.1 GeneMarkS-2+ CDS 161 5776 . - 0 ID=cds-WP_140700850.1;Parent=gene-FJM01_RS00125;Dbxref=GenBank:WP_140700850.1;Name=WP_140700850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00125;product=M60 family metallopeptidase;protein_id=WP_140700850.1;transl_table=4 NZ_VFSY01000002.1 RefSeq gene 5790 6221 . - . ID=gene-FJM01_RS00130;Name=FJM01_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00130;old_locus_tag=FJM01_00130 NZ_VFSY01000002.1 Protein Homology CDS 5790 6221 . - 0 ID=cds-WP_124724111.1;Parent=gene-FJM01_RS00130;Dbxref=GenBank:WP_124724111.1;Name=WP_124724111.1;Ontology_term=GO:0032259,GO:0003723,GO:0070038,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (pseudouridine-N3-)-methyltransferase activity|0070038||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054331.1;locus_tag=FJM01_RS00130;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_124724111.1;transl_table=4 NZ_VFSY01000002.1 RefSeq gene 6221 8041 . - . ID=gene-FJM01_RS00135;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=FJM01_RS00135;old_locus_tag=FJM01_00135 NZ_VFSY01000002.1 Protein Homology CDS 6221 8041 . - 0 ID=cds-WP_124724112.1;Parent=gene-FJM01_RS00135;Dbxref=GenBank:WP_124724112.1;Name=WP_124724112.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054169.1;locus_tag=FJM01_RS00135;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_124724112.1;transl_table=4 NZ_VFSY01000002.1 RefSeq gene 8043 8381 . - . ID=gene-FJM01_RS00140;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=FJM01_RS00140;old_locus_tag=FJM01_00140 NZ_VFSY01000002.1 Protein Homology CDS 8043 8381 . - 0 ID=cds-WP_124724113.1;Parent=gene-FJM01_RS00140;Dbxref=GenBank:WP_124724113.1;Name=WP_124724113.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: protein motif:HMM:NF014130.7;locus_tag=FJM01_RS00140;product=30S ribosome-binding factor RbfA;protein_id=WP_124724113.1;transl_table=4 NZ_VFSY01000002.1 RefSeq gene 8433 10187 . - . ID=gene-FJM01_RS00145;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=FJM01_RS00145;old_locus_tag=FJM01_00145 NZ_VFSY01000002.1 Protein Homology CDS 8433 10187 . - 0 ID=cds-WP_334199130.1;Parent=gene-FJM01_RS00145;Dbxref=GenBank:WP_334199130.1;Name=WP_334199130.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: protein motif:HMM:TIGR00487.1;locus_tag=FJM01_RS00145;product=translation initiation factor IF-2;protein_id=WP_334199130.1;transl_table=4 NZ_VFSY01000002.1 RefSeq gene 10142 10447 . - . ID=gene-FJM01_RS00150;Name=FJM01_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00150;old_locus_tag=FJM01_00150 NZ_VFSY01000002.1 Protein Homology CDS 10142 10447 . - 0 ID=cds-WP_124724115.1;Parent=gene-FJM01_RS00150;Dbxref=GenBank:WP_124724115.1;Name=WP_124724115.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: protein motif:HMM:NF016204.7;locus_tag=FJM01_RS00150;product=YlxR family protein;protein_id=WP_124724115.1;transl_table=4 NZ_VFSY01000002.1 RefSeq gene 10434 11504 . - . ID=gene-FJM01_RS00155;Name=FJM01_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00155;old_locus_tag=FJM01_00155 NZ_VFSY01000002.1 Protein Homology CDS 10434 11504 . - 0 ID=cds-WP_261368921.1;Parent=gene-FJM01_RS00155;Dbxref=GenBank:WP_261368921.1;Name=WP_261368921.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024582.7;locus_tag=FJM01_RS00155;product=hypothetical protein;protein_id=WP_261368921.1;transl_table=4 NZ_VFSY01000002.1 RefSeq gene 11734 12039 . - . ID=gene-FJM01_RS03340;Name=FJM01_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03340 NZ_VFSY01000002.1 Protein Homology CDS 11734 12039 . - 0 ID=cds-WP_261368922.1;Parent=gene-FJM01_RS03340;Dbxref=GenBank:WP_261368922.1;Name=WP_261368922.1;Ontology_term=GO:0031554,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of termination of DNA-templated transcription|0031554||IEA;inference=COORDINATES: protein motif:HMM:NF020118.7;locus_tag=FJM01_RS03340;product=NusA N-terminal domain-containing protein;protein_id=WP_261368922.1;transl_table=4 NZ_VFSY01000002.1 RefSeq gene 12143 12908 . - . ID=gene-FJM01_RS00160;Name=FJM01_RS00160;end_range=12908,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00160;old_locus_tag=FJM01_00160;partial=true NZ_VFSY01000002.1 Protein Homology CDS 12143 12908 . - 1 ID=cds-WP_140700851.1;Parent=gene-FJM01_RS00160;Dbxref=GenBank:WP_140700851.1;Name=WP_140700851.1;end_range=12908,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025986.7;locus_tag=FJM01_RS00160;partial=true;product=helix-hairpin-helix domain-containing protein;protein_id=WP_140700851.1;transl_table=4 ##sequence-region NZ_VFSY01000017.1 1 11427 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000017.1 RefSeq region 1 11427 . + . ID=NZ_VFSY01000017.1:1..11427;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000017.1 RefSeq gene 1 296 . + . ID=gene-FJM01_RS03240;Name=FJM01_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03240;partial=true;start_range=.,1 NZ_VFSY01000017.1 GeneMarkS-2+ CDS 1 296 . + 2 ID=cds-WP_334199137.1;Parent=gene-FJM01_RS03240;Dbxref=GenBank:WP_334199137.1;Name=WP_334199137.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03240;partial=true;product=hypothetical protein;protein_id=WP_334199137.1;start_range=.,1;transl_table=4 NZ_VFSY01000017.1 RefSeq gene 289 1833 . + . ID=gene-FJM01_RS00635;Name=FJM01_RS00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00635;old_locus_tag=FJM01_00635 NZ_VFSY01000017.1 Protein Homology CDS 289 1833 . + 0 ID=cds-WP_140700922.1;Parent=gene-FJM01_RS00635;Dbxref=GenBank:WP_140700922.1;Name=WP_140700922.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045955.1;locus_tag=FJM01_RS00635;product=MHO_4530 family protein;protein_id=WP_140700922.1;transl_table=4 NZ_VFSY01000017.1 RefSeq gene 1843 3756 . + . ID=gene-FJM01_RS00640;Name=FJM01_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00640;old_locus_tag=FJM01_00640 NZ_VFSY01000017.1 Protein Homology CDS 1843 3756 . + 0 ID=cds-WP_140700923.1;Parent=gene-FJM01_RS00640;Dbxref=GenBank:WP_140700923.1;Name=WP_140700923.1;Ontology_term=GO:0006508,GO:0004222,GO:0008237,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF017464.7;locus_tag=FJM01_RS00640;product=M13 family metallopeptidase;protein_id=WP_140700923.1;transl_table=4 NZ_VFSY01000017.1 RefSeq gene 3817 4485 . + . ID=gene-FJM01_RS00645;Name=FJM01_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00645;old_locus_tag=FJM01_00645 NZ_VFSY01000017.1 Protein Homology CDS 3817 4485 . + 0 ID=cds-WP_140700924.1;Parent=gene-FJM01_RS00645;Dbxref=GenBank:WP_140700924.1;Name=WP_140700924.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033817.2;locus_tag=FJM01_RS00645;product=variable surface lipoprotein;protein_id=WP_140700924.1;transl_table=4 NZ_VFSY01000017.1 RefSeq gene 4501 5403 . - . ID=gene-FJM01_RS00650;Name=FJM01_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00650;old_locus_tag=FJM01_00650 NZ_VFSY01000017.1 Protein Homology CDS 4501 5403 . - 0 ID=cds-WP_140700925.1;Parent=gene-FJM01_RS00650;Dbxref=GenBank:WP_140700925.1;Name=WP_140700925.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017452.7;locus_tag=FJM01_RS00650;product=nucleotidyltransferase;protein_id=WP_140700925.1;transl_table=4 NZ_VFSY01000017.1 RefSeq gene 6454 6831 . + . ID=gene-FJM01_RS03385;Name=FJM01_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03385;old_locus_tag=FJM01_00660 NZ_VFSY01000017.1 GeneMarkS-2+ CDS 6454 6831 . + 0 ID=cds-WP_186390747.1;Parent=gene-FJM01_RS03385;Dbxref=GenBank:WP_186390747.1;Name=WP_186390747.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03385;product=hypothetical protein;protein_id=WP_186390747.1;transl_table=4 NZ_VFSY01000017.1 RefSeq gene 6971 7099 . + . ID=gene-FJM01_RS03515;Name=FJM01_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03515 NZ_VFSY01000017.1 Protein Homology CDS 6971 7099 . + 0 ID=cds-WP_315850226.1;Parent=gene-FJM01_RS03515;Dbxref=GenBank:WP_315850226.1;Name=WP_315850226.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021882.7;locus_tag=FJM01_RS03515;product=hypothetical protein;protein_id=WP_315850226.1;transl_table=4 NZ_VFSY01000017.1 RefSeq gene 7128 8315 . + . ID=gene-FJM01_RS00665;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=FJM01_RS00665;old_locus_tag=FJM01_00665 NZ_VFSY01000017.1 Protein Homology CDS 7128 8315 . + 0 ID=cds-WP_315850227.1;Parent=gene-FJM01_RS00665;Dbxref=GenBank:WP_315850227.1;Name=WP_315850227.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: protein motif:HMM:TIGR00450.1;locus_tag=FJM01_RS00665;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_315850227.1;transl_table=4 NZ_VFSY01000017.1 RefSeq gene 8318 9622 . + . ID=gene-FJM01_RS00670;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=FJM01_RS00670;old_locus_tag=FJM01_00670 NZ_VFSY01000017.1 Protein Homology CDS 8318 9622 . + 0 ID=cds-WP_140700928.1;Parent=gene-FJM01_RS00670;Dbxref=GenBank:WP_140700928.1;Name=WP_140700928.1;Ontology_term=GO:0000154,GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: protein motif:HMM:TIGR00479.1;locus_tag=FJM01_RS00670;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_140700928.1;transl_table=4 NZ_VFSY01000017.1 RefSeq gene 9767 10831 . + . ID=gene-FJM01_RS00675;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=FJM01_RS00675;old_locus_tag=FJM01_00675 NZ_VFSY01000017.1 Protein Homology CDS 9767 10831 . + 0 ID=cds-WP_140700929.1;Parent=gene-FJM01_RS00675;Dbxref=GenBank:WP_140700929.1;Name=WP_140700929.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054632.1;locus_tag=FJM01_RS00675;product=signal recognition particle-docking protein FtsY;protein_id=WP_140700929.1;transl_table=4 NZ_VFSY01000017.1 RefSeq gene 10821 11051 . + . ID=gene-FJM01_RS00680;Name=FJM01_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00680;old_locus_tag=FJM01_00680 NZ_VFSY01000017.1 Protein Homology CDS 10821 11051 . + 0 ID=cds-WP_124724221.1;Parent=gene-FJM01_RS00680;Dbxref=GenBank:WP_124724221.1;Name=WP_124724221.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054377.1;locus_tag=FJM01_RS00680;product=sigma factor-like helix-turn-helix DNA-binding protein;protein_id=WP_124724221.1;transl_table=4 NZ_VFSY01000017.1 RefSeq gene 11052 11427 . + . ID=gene-FJM01_RS00685;Name=FJM01_RS00685;end_range=11427,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00685;old_locus_tag=FJM01_00685;partial=true NZ_VFSY01000017.1 Protein Homology CDS 11052 11427 . + 0 ID=cds-WP_261368940.1;Parent=gene-FJM01_RS00685;Dbxref=GenBank:WP_261368940.1;Name=WP_261368940.1;end_range=11427,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033817.2;locus_tag=FJM01_RS00685;partial=true;product=variable surface lipoprotein;protein_id=WP_261368940.1;transl_table=4 ##sequence-region NZ_VFSY01000018.1 1 6264 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000018.1 RefSeq region 1 6264 . + . ID=NZ_VFSY01000018.1:1..6264;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000018.1 RefSeq gene 1 518 . + . ID=gene-FJM01_RS03245;Name=FJM01_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03245;partial=true;start_range=.,1 NZ_VFSY01000018.1 GeneMarkS-2+ CDS 1 518 . + 2 ID=cds-WP_186390748.1;Parent=gene-FJM01_RS03245;Dbxref=GenBank:WP_186390748.1;Name=WP_186390748.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03245;partial=true;product=hypothetical protein;protein_id=WP_186390748.1;start_range=.,1;transl_table=4 NZ_VFSY01000018.1 RefSeq gene 581 1315 . + . ID=gene-FJM01_RS00690;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=FJM01_RS00690;old_locus_tag=FJM01_00690 NZ_VFSY01000018.1 Protein Homology CDS 581 1315 . + 0 ID=cds-WP_140700930.1;Parent=gene-FJM01_RS00690;Dbxref=GenBank:WP_140700930.1;Name=WP_140700930.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054744.1;locus_tag=FJM01_RS00690;product=UMP kinase;protein_id=WP_140700930.1;transl_table=4 NZ_VFSY01000018.1 RefSeq gene 1315 1866 . + . ID=gene-FJM01_RS00695;Name=FJM01_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00695;old_locus_tag=FJM01_00695 NZ_VFSY01000018.1 Protein Homology CDS 1315 1866 . + 0 ID=cds-WP_140700931.1;Parent=gene-FJM01_RS00695;Dbxref=GenBank:WP_140700931.1;Name=WP_140700931.1;Ontology_term=GO:0002184,GO:0006412,GO:0043023;gbkey=CDS;go_function=ribosomal large subunit binding|0043023||IEA;go_process=cytoplasmic translational termination|0002184||IEA,translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:NF013891.7;locus_tag=FJM01_RS00695;product=ribosome-recycling factor;protein_id=WP_140700931.1;transl_table=4 NZ_VFSY01000018.1 RefSeq gene 1905 2864 . + . ID=gene-FJM01_RS00700;Name=FJM01_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00700;old_locus_tag=FJM01_00700 NZ_VFSY01000018.1 Protein Homology CDS 1905 2864 . + 0 ID=cds-WP_140700932.1;Parent=gene-FJM01_RS00700;Dbxref=GenBank:WP_140700932.1;Name=WP_140700932.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: protein motif:HMM:NF013327.7;locus_tag=FJM01_RS00700;product=phosphatidate cytidylyltransferase;protein_id=WP_140700932.1;transl_table=4 NZ_VFSY01000018.1 RefSeq gene 2874 5678 . + . ID=gene-FJM01_RS00705;Name=FJM01_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00705;old_locus_tag=FJM01_00705 NZ_VFSY01000018.1 Protein Homology CDS 2874 5678 . + 0 ID=cds-WP_140700933.1;Parent=gene-FJM01_RS00705;Dbxref=GenBank:WP_140700933.1;Name=WP_140700933.1;Ontology_term=GO:0004527;gbkey=CDS;go_function=exonuclease activity|0004527||IEA;inference=COORDINATES: protein motif:HMM:NF014826.7;locus_tag=FJM01_RS00705;product=exonuclease domain-containing protein;protein_id=WP_140700933.1;transl_table=4 NZ_VFSY01000018.1 RefSeq pseudogene 5608 6264 . + . ID=gene-FJM01_RS00710;Name=FJM01_RS00710;end_range=6264,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=FJM01_RS00710;old_locus_tag=FJM01_00710;partial=true;pseudo=true NZ_VFSY01000018.1 Protein Homology CDS 5608 6264 . + 0 ID=cds-FJM01_RS00710;Parent=gene-FJM01_RS00710;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=6264,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019353.7;locus_tag=FJM01_RS00710;partial=true;product=PolC-type DNA polymerase III;pseudo=true;transl_table=4 ##sequence-region NZ_VFSY01000024.1 1 35822 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000024.1 RefSeq region 1 35822 . + . ID=NZ_VFSY01000024.1:1..35822;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000024.1 RefSeq gene 1 309 . + . ID=gene-FJM01_RS03260;Name=FJM01_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03260;partial=true;start_range=.,1 NZ_VFSY01000024.1 GeneMarkS-2+ CDS 1 309 . + 0 ID=cds-WP_261368961.1;Parent=gene-FJM01_RS03260;Dbxref=GenBank:WP_261368961.1;Name=WP_261368961.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03260;partial=true;product=hypothetical protein;protein_id=WP_261368961.1;start_range=.,1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 322 801 . + . ID=gene-FJM01_RS03445;Name=FJM01_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03445 NZ_VFSY01000024.1 Protein Homology CDS 322 801 . + 0 ID=cds-WP_261368962.1;Parent=gene-FJM01_RS03445;Dbxref=GenBank:WP_261368962.1;Name=WP_261368962.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019887.7;locus_tag=FJM01_RS03445;product=HAD hydrolase family protein;protein_id=WP_261368962.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 692 1234 . + . ID=gene-FJM01_RS03450;Name=FJM01_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03450;old_locus_tag=FJM01_01790 NZ_VFSY01000024.1 Protein Homology CDS 692 1234 . + 0 ID=cds-WP_261368963.1;Parent=gene-FJM01_RS03450;Dbxref=GenBank:WP_261368963.1;Name=WP_261368963.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF019887.7;locus_tag=FJM01_RS03450;product=HAD family hydrolase;protein_id=WP_261368963.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 1236 1784 . + . ID=gene-FJM01_RS01795;Name=FJM01_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01795;old_locus_tag=FJM01_01795 NZ_VFSY01000024.1 GeneMarkS-2+ CDS 1236 1784 . + 0 ID=cds-WP_140701076.1;Parent=gene-FJM01_RS01795;Dbxref=GenBank:WP_140701076.1;Name=WP_140701076.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01795;product=hypothetical protein;protein_id=WP_140701076.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 1747 2301 . + . ID=gene-FJM01_RS01800;Name=FJM01_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01800;old_locus_tag=FJM01_01800 NZ_VFSY01000024.1 GeneMarkS-2+ CDS 1747 2301 . + 0 ID=cds-WP_140701078.1;Parent=gene-FJM01_RS01800;Dbxref=GenBank:WP_140701078.1;Name=WP_140701078.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01800;product=hypothetical protein;protein_id=WP_140701078.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 2303 5122 . + . ID=gene-FJM01_RS01805;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=FJM01_RS01805;old_locus_tag=FJM01_01805 NZ_VFSY01000024.1 Protein Homology CDS 2303 5122 . + 0 ID=cds-WP_186390759.1;Parent=gene-FJM01_RS01805;Dbxref=GenBank:WP_186390759.1;Name=WP_186390759.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004428014.1;locus_tag=FJM01_RS01805;product=excinuclease ABC subunit UvrA;protein_id=WP_186390759.1;transl_table=4 NZ_VFSY01000024.1 RefSeq pseudogene 5269 5415 . + . ID=gene-FJM01_RS03675;Name=FJM01_RS03675;end_range=5415,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=FJM01_RS03675;partial=true;pseudo=true NZ_VFSY01000024.1 Protein Homology CDS 5269 5415 . + 0 ID=cds-FJM01_RS03675;Parent=gene-FJM01_RS03675;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=5415,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013915.7;locus_tag=FJM01_RS03675;partial=true;product=prolipoprotein diacylglyceryl transferase;pseudo=true;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 5426 6124 . + . ID=gene-FJM01_RS01810;Name=FJM01_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01810;old_locus_tag=FJM01_01810 NZ_VFSY01000024.1 Protein Homology CDS 5426 6124 . + 0 ID=cds-WP_261368964.1;Parent=gene-FJM01_RS01810;Dbxref=GenBank:WP_261368964.1;Name=WP_261368964.1;Ontology_term=GO:0009249,GO:0042158,GO:0008961,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA,lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: protein motif:HMM:NF013915.7;locus_tag=FJM01_RS01810;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_261368964.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 6173 7096 . + . ID=gene-FJM01_RS01815;Name=FJM01_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01815;old_locus_tag=FJM01_01815 NZ_VFSY01000024.1 Protein Homology CDS 6173 7096 . + 0 ID=cds-WP_140701082.1;Parent=gene-FJM01_RS01815;Dbxref=GenBank:WP_140701082.1;Name=WP_140701082.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:NF019604.7;locus_tag=FJM01_RS01815;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_140701082.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 7148 7233 . + . ID=gene-FJM01_RS01820;Name=FJM01_RS01820;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS01820;old_locus_tag=FJM01_01820 NZ_VFSY01000024.1 tRNAscan-SE tRNA 7148 7233 . + . ID=rna-FJM01_RS01820;Parent=gene-FJM01_RS01820;anticodon=(pos:7182..7184);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS01820;product=tRNA-Tyr NZ_VFSY01000024.1 tRNAscan-SE exon 7148 7233 . + . ID=exon-FJM01_RS01820-1;Parent=rna-FJM01_RS01820;anticodon=(pos:7182..7184);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS01820;product=tRNA-Tyr NZ_VFSY01000024.1 RefSeq gene 7237 7311 . + . ID=gene-FJM01_RS01825;Name=FJM01_RS01825;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS01825;old_locus_tag=FJM01_01825 NZ_VFSY01000024.1 tRNAscan-SE tRNA 7237 7311 . + . ID=rna-FJM01_RS01825;Parent=gene-FJM01_RS01825;anticodon=(pos:7269..7271);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS01825;product=tRNA-Gln NZ_VFSY01000024.1 tRNAscan-SE exon 7237 7311 . + . ID=exon-FJM01_RS01825-1;Parent=rna-FJM01_RS01825;anticodon=(pos:7269..7271);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS01825;product=tRNA-Gln NZ_VFSY01000024.1 RefSeq gene 7403 9814 . + . ID=gene-FJM01_RS01830;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=FJM01_RS01830;old_locus_tag=FJM01_01830 NZ_VFSY01000024.1 Protein Homology CDS 7403 9814 . + 0 ID=cds-WP_140701084.1;Parent=gene-FJM01_RS01830;Dbxref=GenBank:WP_140701084.1;Name=WP_140701084.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269612.1;locus_tag=FJM01_RS01830;product=leucine--tRNA ligase;protein_id=WP_140701084.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 9823 12489 . + . ID=gene-FJM01_RS01835;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=FJM01_RS01835;old_locus_tag=FJM01_01835 NZ_VFSY01000024.1 Protein Homology CDS 9823 12489 . + 0 ID=cds-WP_140701086.1;Parent=gene-FJM01_RS01835;Dbxref=GenBank:WP_140701086.1;Name=WP_140701086.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054639.1;locus_tag=FJM01_RS01835;product=isoleucine--tRNA ligase;protein_id=WP_140701086.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 12482 13147 . + . ID=gene-FJM01_RS01840;Name=FJM01_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01840;old_locus_tag=FJM01_01840 NZ_VFSY01000024.1 Protein Homology CDS 12482 13147 . + 0 ID=cds-WP_140701088.1;Parent=gene-FJM01_RS01840;Dbxref=GenBank:WP_140701088.1;Name=WP_140701088.1;Ontology_term=GO:0006508,GO:0004190;gbkey=CDS;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF013421.7;locus_tag=FJM01_RS01840;product=signal peptidase II;protein_id=WP_140701088.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 13205 13804 . + . ID=gene-FJM01_RS01845;Name=FJM01_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01845;old_locus_tag=FJM01_01845 NZ_VFSY01000024.1 Protein Homology CDS 13205 13804 . + 0 ID=cds-WP_140701090.1;Parent=gene-FJM01_RS01845;Dbxref=GenBank:WP_140701090.1;Name=WP_140701090.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF002370.0;locus_tag=FJM01_RS01845;product=FMN-dependent NADH-azoreductase;protein_id=WP_140701090.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 13861 14040 . - . ID=gene-FJM01_RS03300;Name=FJM01_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03300 NZ_VFSY01000024.1 GeneMarkS-2+ CDS 13861 14040 . - 0 ID=cds-WP_222400911.1;Parent=gene-FJM01_RS03300;Dbxref=GenBank:WP_222400911.1;Name=WP_222400911.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03300;product=hypothetical protein;protein_id=WP_222400911.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 14012 14263 . - . ID=gene-FJM01_RS03305;Name=FJM01_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03305 NZ_VFSY01000024.1 GeneMarkS-2+ CDS 14012 14263 . - 0 ID=cds-WP_222400912.1;Parent=gene-FJM01_RS03305;Dbxref=GenBank:WP_222400912.1;Name=WP_222400912.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03305;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_222400912.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 14356 14763 . - . ID=gene-FJM01_RS01855;Name=FJM01_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01855;old_locus_tag=FJM01_01855 NZ_VFSY01000024.1 GeneMarkS-2+ CDS 14356 14763 . - 0 ID=cds-WP_140701092.1;Parent=gene-FJM01_RS01855;Dbxref=GenBank:WP_140701092.1;Name=WP_140701092.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01855;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_140701092.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 14765 16507 . - . ID=gene-FJM01_RS01860;Name=FJM01_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01860;old_locus_tag=FJM01_01860 NZ_VFSY01000024.1 GeneMarkS-2+ CDS 14765 16507 . - 0 ID=cds-WP_140701094.1;Parent=gene-FJM01_RS01860;Dbxref=GenBank:WP_140701094.1;Name=WP_140701094.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01860;product=hypothetical protein;protein_id=WP_140701094.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 16665 16913 . + . ID=gene-FJM01_RS01865;Name=FJM01_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01865;old_locus_tag=FJM01_01865 NZ_VFSY01000024.1 GeneMarkS-2+ CDS 16665 16913 . + 0 ID=cds-WP_124724420.1;Parent=gene-FJM01_RS01865;Dbxref=GenBank:WP_124724420.1;Name=WP_124724420.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01865;product=hypothetical protein;protein_id=WP_124724420.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 16942 17160 . - . ID=gene-FJM01_RS01870;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=FJM01_RS01870;old_locus_tag=FJM01_01870 NZ_VFSY01000024.1 Protein Homology CDS 16942 17160 . - 0 ID=cds-WP_124724421.1;Parent=gene-FJM01_RS01870;Dbxref=GenBank:WP_124724421.1;Name=WP_124724421.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:NF000612.0;locus_tag=FJM01_RS01870;product=50S ribosomal protein L31;protein_id=WP_124724421.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 17231 19612 . - . ID=gene-FJM01_RS01875;Name=FJM01_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01875;old_locus_tag=FJM01_01875 NZ_VFSY01000024.1 Protein Homology CDS 17231 19612 . - 0 ID=cds-WP_140701096.1;Parent=gene-FJM01_RS01875;Dbxref=GenBank:WP_140701096.1;Name=WP_140701096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054493.1;locus_tag=FJM01_RS01875;product=phosphoketolase family protein;protein_id=WP_140701096.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 20062 20367 . + . ID=gene-FJM01_RS01880;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=FJM01_RS01880;old_locus_tag=FJM01_01880 NZ_VFSY01000024.1 Protein Homology CDS 20062 20367 . + 0 ID=cds-WP_124724423.1;Parent=gene-FJM01_RS01880;Dbxref=GenBank:WP_124724423.1;Name=WP_124724423.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005683333.1;locus_tag=FJM01_RS01880;product=30S ribosomal protein S10;protein_id=WP_124724423.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 20402 21202 . + . ID=gene-FJM01_RS01885;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=FJM01_RS01885;old_locus_tag=FJM01_01885 NZ_VFSY01000024.1 Protein Homology CDS 20402 21202 . + 0 ID=cds-WP_124724424.1;Parent=gene-FJM01_RS01885;Dbxref=GenBank:WP_124724424.1;Name=WP_124724424.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014034893.1;locus_tag=FJM01_RS01885;product=50S ribosomal protein L3;protein_id=WP_124724424.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 21224 22177 . + . ID=gene-FJM01_RS01890;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=FJM01_RS01890;old_locus_tag=FJM01_01890 NZ_VFSY01000024.1 Protein Homology CDS 21224 22177 . + 0 ID=cds-WP_140701098.1;Parent=gene-FJM01_RS01890;Dbxref=GenBank:WP_140701098.1;Name=WP_140701098.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:NF012782.7;locus_tag=FJM01_RS01890;product=50S ribosomal protein L4;protein_id=WP_140701098.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 22177 22602 . + . ID=gene-FJM01_RS01895;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=FJM01_RS01895;old_locus_tag=FJM01_01895 NZ_VFSY01000024.1 Protein Homology CDS 22177 22602 . + 0 ID=cds-WP_140701100.1;Parent=gene-FJM01_RS01895;Dbxref=GenBank:WP_140701100.1;Name=WP_140701100.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:NF008919.0;locus_tag=FJM01_RS01895;product=50S ribosomal protein L23;protein_id=WP_140701100.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 22693 23538 . + . ID=gene-FJM01_RS01900;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=FJM01_RS01900;old_locus_tag=FJM01_01900 NZ_VFSY01000024.1 Protein Homology CDS 22693 23538 . + 0 ID=cds-WP_124724427.1;Parent=gene-FJM01_RS01900;Dbxref=GenBank:WP_124724427.1;Name=WP_124724427.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020003153.1;locus_tag=FJM01_RS01900;product=50S ribosomal protein L2;protein_id=WP_124724427.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 23538 23813 . + . ID=gene-FJM01_RS01905;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=FJM01_RS01905;old_locus_tag=FJM01_01905 NZ_VFSY01000024.1 Protein Homology CDS 23538 23813 . + 0 ID=cds-WP_124724428.1;Parent=gene-FJM01_RS01905;Dbxref=GenBank:WP_124724428.1;Name=WP_124724428.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584225.1;locus_tag=FJM01_RS01905;product=30S ribosomal protein S19;protein_id=WP_124724428.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 23816 24190 . + . ID=gene-FJM01_RS01910;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=FJM01_RS01910;old_locus_tag=FJM01_01910 NZ_VFSY01000024.1 Protein Homology CDS 23816 24190 . + 0 ID=cds-WP_334199152.1;Parent=gene-FJM01_RS01910;Dbxref=GenBank:WP_334199152.1;Name=WP_334199152.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054161.1;locus_tag=FJM01_RS01910;product=50S ribosomal protein L22;protein_id=WP_334199152.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 24194 24928 . + . ID=gene-FJM01_RS01915;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=FJM01_RS01915;old_locus_tag=FJM01_01915 NZ_VFSY01000024.1 Protein Homology CDS 24194 24928 . + 0 ID=cds-WP_140701104.1;Parent=gene-FJM01_RS01915;Dbxref=GenBank:WP_140701104.1;Name=WP_140701104.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054375.1;locus_tag=FJM01_RS01915;product=30S ribosomal protein S3;protein_id=WP_140701104.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 24906 25346 . + . ID=gene-FJM01_RS01920;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=FJM01_RS01920;old_locus_tag=FJM01_01920 NZ_VFSY01000024.1 Protein Homology CDS 24906 25346 . + 0 ID=cds-WP_124724431.1;Parent=gene-FJM01_RS01920;Dbxref=GenBank:WP_124724431.1;Name=WP_124724431.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054481.1;locus_tag=FJM01_RS01920;product=50S ribosomal protein L16;protein_id=WP_124724431.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 25346 25834 . + . ID=gene-FJM01_RS03700;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=FJM01_RS03700;old_locus_tag=FJM01_01925 NZ_VFSY01000024.1 Protein Homology CDS 25346 25834 . + 0 ID=cds-WP_140701106.1;Parent=gene-FJM01_RS03700;Dbxref=GenBank:WP_140701106.1;Name=WP_140701106.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:TIGR03635.1;locus_tag=FJM01_RS03700;product=30S ribosomal protein S17;protein_id=WP_140701106.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 25827 26195 . + . ID=gene-FJM01_RS01930;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=FJM01_RS01930;old_locus_tag=FJM01_01930 NZ_VFSY01000024.1 Protein Homology CDS 25827 26195 . + 0 ID=cds-WP_140701108.1;Parent=gene-FJM01_RS01930;Dbxref=GenBank:WP_140701108.1;Name=WP_140701108.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429034.1;locus_tag=FJM01_RS01930;product=50S ribosomal protein L14;protein_id=WP_140701108.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 26197 26532 . + . ID=gene-FJM01_RS01935;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=FJM01_RS01935;old_locus_tag=FJM01_01935 NZ_VFSY01000024.1 Protein Homology CDS 26197 26532 . + 0 ID=cds-WP_124724435.1;Parent=gene-FJM01_RS01935;Dbxref=GenBank:WP_124724435.1;Name=WP_124724435.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:TIGR01079.1;locus_tag=FJM01_RS01935;product=50S ribosomal protein L24;protein_id=WP_124724435.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 26544 27098 . + . ID=gene-FJM01_RS01940;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=FJM01_RS01940;old_locus_tag=FJM01_01940 NZ_VFSY01000024.1 Protein Homology CDS 26544 27098 . + 0 ID=cds-WP_140701110.1;Parent=gene-FJM01_RS01940;Dbxref=GenBank:WP_140701110.1;Name=WP_140701110.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387537.1;locus_tag=FJM01_RS01940;product=50S ribosomal protein L5;protein_id=WP_140701110.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 27113 27298 . + . ID=gene-FJM01_RS01945;Name=FJM01_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01945;old_locus_tag=FJM01_01945 NZ_VFSY01000024.1 Protein Homology CDS 27113 27298 . + 0 ID=cds-WP_124724437.1;Parent=gene-FJM01_RS01945;Dbxref=GenBank:WP_124724437.1;Name=WP_124724437.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011283766.1;locus_tag=FJM01_RS01945;product=type Z 30S ribosomal protein S14;protein_id=WP_124724437.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 27307 27714 . + . ID=gene-FJM01_RS01950;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=FJM01_RS01950;old_locus_tag=FJM01_01950 NZ_VFSY01000024.1 Protein Homology CDS 27307 27714 . + 0 ID=cds-WP_334199153.1;Parent=gene-FJM01_RS01950;Dbxref=GenBank:WP_334199153.1;Name=WP_334199153.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362508.1;locus_tag=FJM01_RS01950;product=30S ribosomal protein S8;protein_id=WP_334199153.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 27729 28268 . + . ID=gene-FJM01_RS01955;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=FJM01_RS01955;old_locus_tag=FJM01_01955 NZ_VFSY01000024.1 Protein Homology CDS 27729 28268 . + 0 ID=cds-WP_124724439.1;Parent=gene-FJM01_RS01955;Dbxref=GenBank:WP_124724439.1;Name=WP_124724439.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019269626.1;locus_tag=FJM01_RS01955;product=50S ribosomal protein L6;protein_id=WP_124724439.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 28290 28640 . + . ID=gene-FJM01_RS01960;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=FJM01_RS01960;old_locus_tag=FJM01_01960 NZ_VFSY01000024.1 Protein Homology CDS 28290 28640 . + 0 ID=cds-WP_124724440.1;Parent=gene-FJM01_RS01960;Dbxref=GenBank:WP_124724440.1;Name=WP_124724440.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:NF013057.7;locus_tag=FJM01_RS01960;product=50S ribosomal protein L18;protein_id=WP_124724440.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 28640 29275 . + . ID=gene-FJM01_RS01965;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=FJM01_RS01965;old_locus_tag=FJM01_01965 NZ_VFSY01000024.1 Protein Homology CDS 28640 29275 . + 0 ID=cds-WP_140701114.1;Parent=gene-FJM01_RS01965;Dbxref=GenBank:WP_140701114.1;Name=WP_140701114.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054439.1;locus_tag=FJM01_RS01965;product=30S ribosomal protein S5;protein_id=WP_140701114.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 29288 29722 . + . ID=gene-FJM01_RS01970;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=FJM01_RS01970;old_locus_tag=FJM01_01970 NZ_VFSY01000024.1 Protein Homology CDS 29288 29722 . + 0 ID=cds-WP_124724442.1;Parent=gene-FJM01_RS01970;Dbxref=GenBank:WP_124724442.1;Name=WP_124724442.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008362500.1;locus_tag=FJM01_RS01970;product=50S ribosomal protein L15;protein_id=WP_124724442.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 29876 30493 . + . ID=gene-FJM01_RS03455;Name=FJM01_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03455 NZ_VFSY01000024.1 Protein Homology CDS 29876 30493 . + 0 ID=cds-WP_261368965.1;Parent=gene-FJM01_RS03455;Dbxref=GenBank:WP_261368965.1;Name=WP_261368965.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012564.7;locus_tag=FJM01_RS03455;product=hypothetical protein;protein_id=WP_261368965.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 30378 31190 . + . ID=gene-FJM01_RS03460;Name=FJM01_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03460 NZ_VFSY01000024.1 Protein Homology CDS 30378 31190 . + 0 ID=cds-WP_261368967.1;Parent=gene-FJM01_RS03460;Dbxref=GenBank:WP_261368967.1;Name=WP_261368967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012564.7;locus_tag=FJM01_RS03460;product=SecY family transport protein;protein_id=WP_261368967.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 31184 31894 . + . ID=gene-FJM01_RS01980;Name=FJM01_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01980;old_locus_tag=FJM01_01980 NZ_VFSY01000024.1 Protein Homology CDS 31184 31894 . + 0 ID=cds-WP_124724443.1;Parent=gene-FJM01_RS01980;Dbxref=GenBank:WP_124724443.1;Name=WP_124724443.1;Ontology_term=GO:0006139,GO:0005524,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: protein motif:HMM:TIGR01351.1;locus_tag=FJM01_RS01980;product=adenylate kinase;protein_id=WP_124724443.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 31882 32634 . + . ID=gene-FJM01_RS01985;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=FJM01_RS01985;old_locus_tag=FJM01_01985 NZ_VFSY01000024.1 Protein Homology CDS 31882 32634 . + 0 ID=cds-WP_124724444.1;Parent=gene-FJM01_RS01985;Dbxref=GenBank:WP_124724444.1;Name=WP_124724444.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054763.1;locus_tag=FJM01_RS01985;product=type I methionyl aminopeptidase;protein_id=WP_124724444.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 32634 32849 . + . ID=gene-FJM01_RS01990;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=FJM01_RS01990;old_locus_tag=FJM01_01990 NZ_VFSY01000024.1 Protein Homology CDS 32634 32849 . + 0 ID=cds-WP_124724445.1;Parent=gene-FJM01_RS01990;Dbxref=GenBank:WP_124724445.1;Name=WP_124724445.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054488.1;locus_tag=FJM01_RS01990;product=translation initiation factor IF-1;protein_id=WP_124724445.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 32864 32977 . + . ID=gene-FJM01_RS01995;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=FJM01_RS01995;old_locus_tag=FJM01_01995 NZ_VFSY01000024.1 Protein Homology CDS 32864 32977 . + 0 ID=cds-WP_002881082.1;Parent=gene-FJM01_RS01995;Dbxref=GenBank:WP_002881082.1;Name=WP_002881082.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:TIGR01022.1;locus_tag=FJM01_RS01995;product=50S ribosomal protein L36;protein_id=WP_002881082.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 32981 33349 . + . ID=gene-FJM01_RS02000;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=FJM01_RS02000;old_locus_tag=FJM01_02000 NZ_VFSY01000024.1 Protein Homology CDS 32981 33349 . + 0 ID=cds-WP_124724446.1;Parent=gene-FJM01_RS02000;Dbxref=GenBank:WP_124724446.1;Name=WP_124724446.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054806.1;locus_tag=FJM01_RS02000;product=30S ribosomal protein S13;protein_id=WP_124724446.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 33352 33726 . + . ID=gene-FJM01_RS02005;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=FJM01_RS02005;old_locus_tag=FJM01_02005 NZ_VFSY01000024.1 Protein Homology CDS 33352 33726 . + 0 ID=cds-WP_124724447.1;Parent=gene-FJM01_RS02005;Dbxref=GenBank:WP_124724447.1;Name=WP_124724447.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054214.1;locus_tag=FJM01_RS02005;product=30S ribosomal protein S11;protein_id=WP_124724447.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 33833 34804 . + . ID=gene-FJM01_RS02010;Name=FJM01_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02010;old_locus_tag=FJM01_02010 NZ_VFSY01000024.1 Protein Homology CDS 33833 34804 . + 0 ID=cds-WP_261368968.1;Parent=gene-FJM01_RS02010;Dbxref=GenBank:WP_261368968.1;Name=WP_261368968.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: protein motif:HMM:NF003519.0;locus_tag=FJM01_RS02010;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_261368968.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 34804 35169 . + . ID=gene-FJM01_RS02015;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=FJM01_RS02015;old_locus_tag=FJM01_02015 NZ_VFSY01000024.1 Protein Homology CDS 34804 35169 . + 0 ID=cds-WP_124724449.1;Parent=gene-FJM01_RS02015;Dbxref=GenBank:WP_124724449.1;Name=WP_124724449.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054257.1;locus_tag=FJM01_RS02015;product=50S ribosomal protein L17;protein_id=WP_124724449.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 35189 35386 . + . ID=gene-FJM01_RS02020;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=FJM01_RS02020;old_locus_tag=FJM01_02020 NZ_VFSY01000024.1 Protein Homology CDS 35189 35386 . + 0 ID=cds-WP_124724450.1;Parent=gene-FJM01_RS02020;Dbxref=GenBank:WP_124724450.1;Name=WP_124724450.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054127.1;locus_tag=FJM01_RS02020;product=50S ribosomal protein L32;protein_id=WP_124724450.1;transl_table=4 NZ_VFSY01000024.1 RefSeq gene 35580 35822 . + . ID=gene-FJM01_RS02025;Name=FJM01_RS02025;end_range=35822,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=FJM01_RS02025;old_locus_tag=FJM01_02025;partial=true NZ_VFSY01000024.1 cmsearch rRNA 35580 35822 . + . ID=rna-FJM01_RS02025;Parent=gene-FJM01_RS02025;Dbxref=RFAM:RF00177;end_range=35822,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=FJM01_RS02025;partial=true;product=16S ribosomal RNA NZ_VFSY01000024.1 cmsearch exon 35580 35822 . + . ID=exon-FJM01_RS02025-1;Parent=rna-FJM01_RS02025;Dbxref=RFAM:RF00177;end_range=35822,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=FJM01_RS02025;partial=true;product=16S ribosomal RNA ##sequence-region NZ_VFSY01000013.1 1 16997 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000013.1 RefSeq region 1 16997 . + . ID=NZ_VFSY01000013.1:1..16997;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000013.1 RefSeq gene 1 106 . - . ID=gene-FJM01_RS03650;Name=FJM01_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03650;old_locus_tag=FJM01_00360;partial=true;start_range=.,1 NZ_VFSY01000013.1 Protein Homology CDS 1 106 . - 0 ID=cds-WP_140700885.1;Parent=gene-FJM01_RS03650;Dbxref=GenBank:WP_140700885.1;Name=WP_140700885.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033817.2;locus_tag=FJM01_RS03650;partial=true;product=variable surface lipoprotein;protein_id=WP_140700885.1;start_range=.,1;transl_table=4 NZ_VFSY01000013.1 RefSeq gene 173 790 . - . ID=gene-FJM01_RS00365;Name=FJM01_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00365;old_locus_tag=FJM01_00365 NZ_VFSY01000013.1 GeneMarkS-2+ CDS 173 790 . - 0 ID=cds-WP_140700886.1;Parent=gene-FJM01_RS00365;Dbxref=GenBank:WP_140700886.1;Name=WP_140700886.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00365;product=hypothetical protein;protein_id=WP_140700886.1;transl_table=4 NZ_VFSY01000013.1 RefSeq gene 879 1922 . - . ID=gene-FJM01_RS00370;Name=FJM01_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00370;old_locus_tag=FJM01_00370 NZ_VFSY01000013.1 GeneMarkS-2+ CDS 879 1922 . - 0 ID=cds-WP_124724164.1;Parent=gene-FJM01_RS00370;Dbxref=GenBank:WP_124724164.1;Name=WP_124724164.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00370;product=tyrosine-type recombinase/integrase;protein_id=WP_124724164.1;transl_table=4 NZ_VFSY01000013.1 RefSeq gene 2052 5726 . + . ID=gene-FJM01_RS00375;Name=FJM01_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00375;old_locus_tag=FJM01_00375 NZ_VFSY01000013.1 GeneMarkS-2+ CDS 2052 5726 . + 0 ID=cds-WP_140700887.1;Parent=gene-FJM01_RS00375;Dbxref=GenBank:WP_140700887.1;Name=WP_140700887.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00375;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_140700887.1;transl_table=4 NZ_VFSY01000013.1 RefSeq gene 5870 6094 . - . ID=gene-FJM01_RS00380;Name=FJM01_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00380;old_locus_tag=FJM01_00380 NZ_VFSY01000013.1 Protein Homology CDS 5870 6094 . - 0 ID=cds-WP_124724168.1;Parent=gene-FJM01_RS00380;Dbxref=GenBank:WP_124724168.1;Name=WP_124724168.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862659.1;locus_tag=FJM01_RS00380;product=YneF family protein;protein_id=WP_124724168.1;transl_table=4 NZ_VFSY01000013.1 RefSeq gene 6094 6990 . - . ID=gene-FJM01_RS00385;Name=FJM01_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00385;old_locus_tag=FJM01_00385 NZ_VFSY01000013.1 Protein Homology CDS 6094 6990 . - 0 ID=cds-WP_124724169.1;Parent=gene-FJM01_RS00385;Dbxref=GenBank:WP_124724169.1;Name=WP_124724169.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045846.1;locus_tag=FJM01_RS00385;product=MSC_0882 family membrane protein;protein_id=WP_124724169.1;transl_table=4 NZ_VFSY01000013.1 RefSeq gene 6990 8795 . - . ID=gene-FJM01_RS00390;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=FJM01_RS00390;old_locus_tag=FJM01_00390 NZ_VFSY01000013.1 Protein Homology CDS 6990 8795 . - 0 ID=cds-WP_140700888.1;Parent=gene-FJM01_RS00390;Dbxref=GenBank:WP_140700888.1;Name=WP_140700888.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015587228.1;locus_tag=FJM01_RS00390;product=translation elongation factor 4;protein_id=WP_140700888.1;transl_table=4 NZ_VFSY01000013.1 RefSeq gene 8848 10719 . - . ID=gene-FJM01_RS00395;Name=FJM01_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00395;old_locus_tag=FJM01_00395 NZ_VFSY01000013.1 Protein Homology CDS 8848 10719 . - 0 ID=cds-WP_140700889.1;Parent=gene-FJM01_RS00395;Dbxref=GenBank:WP_140700889.1;Name=WP_140700889.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF012869.7;locus_tag=FJM01_RS00395;product=ABC transporter ATP-binding protein;protein_id=WP_140700889.1;transl_table=4 NZ_VFSY01000013.1 RefSeq gene 10827 10973 . + . ID=gene-FJM01_RS03350;Name=FJM01_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03350 NZ_VFSY01000013.1 GeneMarkS-2+ CDS 10827 10973 . + 0 ID=cds-WP_261368927.1;Parent=gene-FJM01_RS03350;Dbxref=GenBank:WP_261368927.1;Name=WP_261368927.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03350;product=hypothetical protein;protein_id=WP_261368927.1;transl_table=4 NZ_VFSY01000013.1 RefSeq gene 10963 12537 . - . ID=gene-FJM01_RS00400;Name=FJM01_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00400;old_locus_tag=FJM01_00400 NZ_VFSY01000013.1 Protein Homology CDS 10963 12537 . - 0 ID=cds-WP_261368928.1;Parent=gene-FJM01_RS00400;Dbxref=GenBank:WP_261368928.1;Name=WP_261368928.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF012869.7;locus_tag=FJM01_RS00400;product=ABC transporter ATP-binding protein;protein_id=WP_261368928.1;transl_table=4 NZ_VFSY01000013.1 RefSeq gene 12580 13764 . - . ID=gene-FJM01_RS00405;Name=FJM01_RS00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00405;old_locus_tag=FJM01_00405 NZ_VFSY01000013.1 Protein Homology CDS 12580 13764 . - 0 ID=cds-WP_140700890.1;Parent=gene-FJM01_RS00405;Dbxref=GenBank:WP_140700890.1;Name=WP_140700890.1;Ontology_term=GO:0006082,GO:0016310,GO:0000287,GO:0005524,GO:0016301,GO:0016774;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C carboxyl group as acceptor|0016774||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054515.1;locus_tag=FJM01_RS00405;product=acetate/propionate family kinase;protein_id=WP_140700890.1;transl_table=4 NZ_VFSY01000013.1 RefSeq gene 13892 14419 . + . ID=gene-FJM01_RS00410;Name=FJM01_RS00410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00410;old_locus_tag=FJM01_00410 NZ_VFSY01000013.1 GeneMarkS-2+ CDS 13892 14419 . + 0 ID=cds-WP_124724173.1;Parent=gene-FJM01_RS00410;Dbxref=GenBank:WP_124724173.1;Name=WP_124724173.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00410;product=NUDIX domain-containing protein;protein_id=WP_124724173.1;transl_table=4 NZ_VFSY01000013.1 RefSeq gene 14541 15473 . + . ID=gene-FJM01_RS00415;Name=FJM01_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00415;old_locus_tag=FJM01_00415 NZ_VFSY01000013.1 GeneMarkS-2+ CDS 14541 15473 . + 0 ID=cds-WP_140700891.1;Parent=gene-FJM01_RS00415;Dbxref=GenBank:WP_140700891.1;Name=WP_140700891.1;Ontology_term=GO:0007062,GO:0051301;gbkey=CDS;go_process=sister chromatid cohesion|0007062||IEA,cell division|0051301||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00415;product=STAG domain-containing protein;protein_id=WP_140700891.1;transl_table=4 NZ_VFSY01000013.1 RefSeq gene 15549 16400 . - . ID=gene-FJM01_RS00420;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=FJM01_RS00420;old_locus_tag=FJM01_00420 NZ_VFSY01000013.1 Protein Homology CDS 15549 16400 . - 0 ID=cds-WP_140700892.1;Parent=gene-FJM01_RS00420;Dbxref=GenBank:WP_140700892.1;Name=WP_140700892.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: protein motif:HMM:TIGR00647.1;locus_tag=FJM01_RS00420;product=DNA-binding protein WhiA;protein_id=WP_140700892.1;transl_table=4 NZ_VFSY01000013.1 RefSeq gene 16444 16997 . - . ID=gene-FJM01_RS00425;Name=FJM01_RS00425;end_range=16997,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00425;old_locus_tag=FJM01_00425;partial=true NZ_VFSY01000013.1 Protein Homology CDS 16444 16997 . - 2 ID=cds-WP_140700893.1;Parent=gene-FJM01_RS00425;Dbxref=GenBank:WP_140700893.1;Name=WP_140700893.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524;end_range=16997,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054430.1;locus_tag=FJM01_RS00425;partial=true;product=aminoacyl--tRNA ligase-related protein;protein_id=WP_140700893.1;transl_table=4 ##sequence-region NZ_VFSY01000014.1 1 2398 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000014.1 RefSeq region 1 2398 . + . ID=NZ_VFSY01000014.1:1..2398;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000014.1 RefSeq gene 1 823 . - . ID=gene-FJM01_RS00430;Name=FJM01_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00430;old_locus_tag=FJM01_00430;partial=true;start_range=.,1 NZ_VFSY01000014.1 Protein Homology CDS 1 823 . - 0 ID=cds-WP_140700894.1;Parent=gene-FJM01_RS00430;Dbxref=GenBank:WP_140700894.1;Name=WP_140700894.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: protein motif:HMM:NF014458.7;locus_tag=FJM01_RS00430;partial=true;product=aminoacyl--tRNA ligase-related protein;protein_id=WP_140700894.1;start_range=.,1;transl_table=4 NZ_VFSY01000014.1 RefSeq gene 936 1913 . + . ID=gene-FJM01_RS00435;Name=FJM01_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00435;old_locus_tag=FJM01_00435 NZ_VFSY01000014.1 Protein Homology CDS 936 1913 . + 0 ID=cds-WP_222400902.1;Parent=gene-FJM01_RS00435;Dbxref=GenBank:WP_222400902.1;Name=WP_222400902.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013704.7;locus_tag=FJM01_RS00435;product=DNA-methyltransferase;protein_id=WP_222400902.1;transl_table=4 NZ_VFSY01000014.1 RefSeq gene 2018 2398 . + . ID=gene-FJM01_RS00440;Name=FJM01_RS00440;end_range=2398,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00440;old_locus_tag=FJM01_00440;partial=true NZ_VFSY01000014.1 GeneMarkS-2+ CDS 2018 2398 . + 0 ID=cds-WP_261368929.1;Parent=gene-FJM01_RS00440;Dbxref=GenBank:WP_261368929.1;Name=WP_261368929.1;end_range=2398,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00440;partial=true;product=hypothetical protein;protein_id=WP_261368929.1;transl_table=4 ##sequence-region NZ_VFSY01000019.1 1 1444 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000019.1 RefSeq region 1 1444 . + . ID=NZ_VFSY01000019.1:1..1444;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000019.1 RefSeq gene 1 1034 . + . ID=gene-FJM01_RS00715;Name=FJM01_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00715;old_locus_tag=FJM01_00715;partial=true;start_range=.,1 NZ_VFSY01000019.1 Protein Homology CDS 1 1034 . + 2 ID=cds-WP_465101065.1;Parent=gene-FJM01_RS00715;Dbxref=GenBank:WP_465101065.1;Name=WP_465101065.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036968.7;locus_tag=FJM01_RS00715;partial=true;product=helix-hairpin-helix domain-containing protein;protein_id=WP_465101065.1;start_range=.,1;transl_table=4 NZ_VFSY01000019.1 RefSeq gene 1058 1369 . - . ID=gene-FJM01_RS00720;Name=FJM01_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00720;old_locus_tag=FJM01_00720 NZ_VFSY01000019.1 GeneMarkS-2+ CDS 1058 1369 . - 0 ID=cds-WP_140700934.1;Parent=gene-FJM01_RS00720;Dbxref=GenBank:WP_140700934.1;Name=WP_140700934.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00720;product=hypothetical protein;protein_id=WP_140700934.1;transl_table=4 ##sequence-region NZ_VFSY01000009.1 1 2348 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000009.1 RefSeq region 1 2348 . + . ID=NZ_VFSY01000009.1:1..2348;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000009.1 RefSeq gene 1 342 . - . ID=gene-FJM01_RS00335;Name=FJM01_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00335;old_locus_tag=FJM01_00335;partial=true;start_range=.,1 NZ_VFSY01000009.1 GeneMarkS-2+ CDS 1 342 . - 0 ID=cds-WP_140700881.1;Parent=gene-FJM01_RS00335;Dbxref=GenBank:WP_140700881.1;Name=WP_140700881.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00335;partial=true;product=collagen-like triple helix repeat-containing protein;protein_id=WP_140700881.1;start_range=.,1;transl_table=4 NZ_VFSY01000009.1 RefSeq gene 470 1690 . - . ID=gene-FJM01_RS00340;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=FJM01_RS00340;old_locus_tag=FJM01_00340 NZ_VFSY01000009.1 Protein Homology CDS 470 1690 . - 0 ID=cds-WP_334199131.1;Parent=gene-FJM01_RS00340;Dbxref=GenBank:WP_334199131.1;Name=WP_334199131.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: protein motif:HMM:NF001756.1;locus_tag=FJM01_RS00340;product=lysine--tRNA ligase;protein_id=WP_334199131.1;transl_table=4 NZ_VFSY01000009.1 RefSeq gene 1614 1946 . - . ID=gene-FJM01_RS03540;Name=FJM01_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03540 NZ_VFSY01000009.1 GeneMarkS-2+ CDS 1614 1946 . - 0 ID=cds-WP_334199132.1;Parent=gene-FJM01_RS03540;Dbxref=GenBank:WP_334199132.1;Name=WP_334199132.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03540;product=class-II aminoacyl-tRNA synthetase family protein;protein_id=WP_334199132.1;transl_table=4 ##sequence-region NZ_VFSY01000010.1 1 1971 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000010.1 RefSeq region 1 1971 . + . ID=NZ_VFSY01000010.1:1..1971;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000010.1 RefSeq gene 1 889 . + . ID=gene-FJM01_RS00345;Name=FJM01_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00345;old_locus_tag=FJM01_00345;partial=true;start_range=.,1 NZ_VFSY01000010.1 GeneMarkS-2+ CDS 1 889 . + 1 ID=cds-WP_222400901.1;Parent=gene-FJM01_RS00345;Dbxref=GenBank:WP_222400901.1;Name=WP_222400901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00345;partial=true;product=collagen-like triple helix repeat-containing protein;protein_id=WP_222400901.1;start_range=.,1;transl_table=4 NZ_VFSY01000010.1 RefSeq gene 956 1843 . + . ID=gene-FJM01_RS00350;Name=FJM01_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00350;old_locus_tag=FJM01_00350 NZ_VFSY01000010.1 Protein Homology CDS 956 1843 . + 0 ID=cds-WP_140700883.1;Parent=gene-FJM01_RS00350;Dbxref=GenBank:WP_140700883.1;Name=WP_140700883.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033817.2;locus_tag=FJM01_RS00350;product=collagen-like triple helix repeat-containing protein;protein_id=WP_140700883.1;transl_table=4 ##sequence-region NZ_VFSY01000008.1 1 1423 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000008.1 RefSeq region 1 1423 . + . ID=NZ_VFSY01000008.1:1..1423;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000008.1 RefSeq gene 135 983 . - . ID=gene-FJM01_RS00330;Name=FJM01_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00330;old_locus_tag=FJM01_00330 NZ_VFSY01000008.1 GeneMarkS-2+ CDS 135 983 . - 0 ID=cds-WP_140700880.1;Parent=gene-FJM01_RS00330;Dbxref=GenBank:WP_140700880.1;Name=WP_140700880.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00330;product=collagen-like protein;protein_id=WP_140700880.1;transl_table=4 NZ_VFSY01000008.1 RefSeq gene 1050 1423 . - . ID=gene-FJM01_RS03225;Name=FJM01_RS03225;end_range=1423,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03225;partial=true NZ_VFSY01000008.1 GeneMarkS-2+ CDS 1050 1423 . - 2 ID=cds-WP_186390742.1;Parent=gene-FJM01_RS03225;Dbxref=GenBank:WP_186390742.1;Name=WP_186390742.1;end_range=1423,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03225;partial=true;product=hypothetical protein;protein_id=WP_186390742.1;transl_table=4 ##sequence-region NZ_VFSY01000012.1 1 656 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000012.1 RefSeq region 1 656 . + . ID=NZ_VFSY01000012.1:1..656;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000012.1 RefSeq gene 1 578 . + . ID=gene-FJM01_RS03230;Name=FJM01_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03230;partial=true;start_range=.,1 NZ_VFSY01000012.1 GeneMarkS-2+ CDS 1 578 . + 2 ID=cds-WP_186390743.1;Parent=gene-FJM01_RS03230;Dbxref=GenBank:WP_186390743.1;Name=WP_186390743.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03230;partial=true;product=hypothetical protein;protein_id=WP_186390743.1;start_range=.,1;transl_table=4 ##sequence-region NZ_VFSY01000023.1 1 95615 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000023.1 RefSeq region 1 95615 . + . ID=NZ_VFSY01000023.1:1..95615;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000023.1 RefSeq gene 518 682 . + . ID=gene-FJM01_RS03250;Name=FJM01_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03250 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 518 682 . + 0 ID=cds-WP_186390754.1;Parent=gene-FJM01_RS03250;Dbxref=GenBank:WP_186390754.1;Name=WP_186390754.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03250;product=hypothetical protein;protein_id=WP_186390754.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 974 1474 . + . ID=gene-FJM01_RS01400;Name=FJM01_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01400;old_locus_tag=FJM01_01400 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 974 1474 . + 0 ID=cds-WP_140701012.1;Parent=gene-FJM01_RS01400;Dbxref=GenBank:WP_140701012.1;Name=WP_140701012.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01400;product=hypothetical protein;protein_id=WP_140701012.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 2222 2944 . + . ID=gene-FJM01_RS01405;Name=FJM01_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01405;old_locus_tag=FJM01_01405 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 2222 2944 . + 0 ID=cds-WP_140701013.1;Parent=gene-FJM01_RS01405;Dbxref=GenBank:WP_140701013.1;Name=WP_140701013.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01405;product=GIY-YIG nuclease family protein;protein_id=WP_140701013.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 3016 4272 . + . ID=gene-FJM01_RS01410;Name=FJM01_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01410;old_locus_tag=FJM01_01410 NZ_VFSY01000023.1 Protein Homology CDS 3016 4272 . + 0 ID=cds-WP_140701014.1;Parent=gene-FJM01_RS01410;Dbxref=GenBank:WP_140701014.1;Name=WP_140701014.1;Ontology_term=GO:0006304,GO:0003677,GO:0003824;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF017026.7;locus_tag=FJM01_RS01410;product=Eco57I restriction-modification methylase domain-containing protein;protein_id=WP_140701014.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 4325 6013 . - . ID=gene-FJM01_RS01415;Name=FJM01_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01415;old_locus_tag=FJM01_01415 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 4325 6013 . - 0 ID=cds-WP_140701015.1;Parent=gene-FJM01_RS01415;Dbxref=GenBank:WP_140701015.1;Name=WP_140701015.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01415;product=ABC transporter permease;protein_id=WP_140701015.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 6013 7158 . - . ID=gene-FJM01_RS01420;Name=cypl;gbkey=Gene;gene=cypl;gene_biotype=protein_coding;locus_tag=FJM01_RS01420;old_locus_tag=FJM01_01420 NZ_VFSY01000023.1 Protein Homology CDS 6013 7158 . - 0 ID=cds-WP_140701016.1;Parent=gene-FJM01_RS01420;Dbxref=GenBank:WP_140701016.1;Name=WP_140701016.1;Ontology_term=GO:0030976,GO:0009897;gbkey=CDS;gene=cypl;go_component=external side of plasma membrane|0009897||IEA;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: protein motif:HMM:NF045838.1;locus_tag=FJM01_RS01420;product=ABC transporter thiamine pyrophosphate-binding lipoprotein p37/Cypl;protein_id=WP_140701016.1;transl_table=4 NZ_VFSY01000023.1 cmsearch riboswitch 7181 7269 . - . ID=id-NZ_VFSY01000023.1:7181..7269;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_VFSY01000023.1 RefSeq gene 7337 7675 . + . ID=gene-FJM01_RS01425;Name=FJM01_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01425;old_locus_tag=FJM01_01425 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 7337 7675 . + 0 ID=cds-WP_124724347.1;Parent=gene-FJM01_RS01425;Dbxref=GenBank:WP_124724347.1;Name=WP_124724347.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01425;product=hypothetical protein;protein_id=WP_124724347.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 7665 8996 . + . ID=gene-FJM01_RS01430;Name=FJM01_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01430;old_locus_tag=FJM01_01430 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 7665 8996 . + 0 ID=cds-WP_124724348.1;Parent=gene-FJM01_RS01430;Dbxref=GenBank:WP_124724348.1;Name=WP_124724348.1;Ontology_term=GO:0006094,GO:0006096,GO:0051156,GO:0004347,GO:0097367;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA,carbohydrate derivative binding|0097367||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glucose 6-phosphate metabolic process|0051156||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01430;product=glucose-6-phosphate isomerase;protein_id=WP_124724348.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 8989 9954 . + . ID=gene-FJM01_RS01435;Name=FJM01_RS01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01435;old_locus_tag=FJM01_01435 NZ_VFSY01000023.1 Protein Homology CDS 8989 9954 . + 0 ID=cds-WP_124724349.1;Parent=gene-FJM01_RS01435;Dbxref=GenBank:WP_124724349.1;Name=WP_124724349.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF014867.7;locus_tag=FJM01_RS01435;product=lactate/malate family dehydrogenase;protein_id=WP_124724349.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 10007 10759 . + . ID=gene-FJM01_RS01440;Name=FJM01_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01440;old_locus_tag=FJM01_01440 NZ_VFSY01000023.1 Protein Homology CDS 10007 10759 . + 0 ID=cds-WP_140701017.1;Parent=gene-FJM01_RS01440;Dbxref=GenBank:WP_140701017.1;Name=WP_140701017.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004426785.1;locus_tag=FJM01_RS01440;product=ATP-binding cassette domain-containing protein;protein_id=WP_140701017.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 10932 13703 . + . ID=gene-FJM01_RS01445;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=FJM01_RS01445;old_locus_tag=FJM01_01445 NZ_VFSY01000023.1 Protein Homology CDS 10932 13703 . + 0 ID=cds-WP_140701018.1;Parent=gene-FJM01_RS01445;Dbxref=GenBank:WP_140701018.1;Name=WP_140701018.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: protein motif:HMM:TIGR01524.1;locus_tag=FJM01_RS01445;product=magnesium-translocating P-type ATPase;protein_id=WP_140701018.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 13795 14592 . + . ID=gene-FJM01_RS01450;Name=FJM01_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01450;old_locus_tag=FJM01_01450 NZ_VFSY01000023.1 Protein Homology CDS 13795 14592 . + 0 ID=cds-WP_334199145.1;Parent=gene-FJM01_RS01450;Dbxref=GenBank:WP_334199145.1;Name=WP_334199145.1;Ontology_term=GO:0009156,GO:0004749;gbkey=CDS;go_function=ribose phosphate diphosphokinase activity|0004749||IEA;go_process=ribonucleoside monophosphate biosynthetic process|0009156||IEA;inference=COORDINATES: protein motif:HMM:NF002320.0;locus_tag=FJM01_RS01450;product=ribose-phosphate diphosphokinase;protein_id=WP_334199145.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 14558 14758 . + . ID=gene-FJM01_RS03670;Name=FJM01_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03670 NZ_VFSY01000023.1 Protein Homology CDS 14558 14758 . + 0 ID=cds-WP_416371554.1;Parent=gene-FJM01_RS03670;Dbxref=GenBank:WP_416371554.1;Name=WP_416371554.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025923.7;locus_tag=FJM01_RS03670;product=hypothetical protein;protein_id=WP_416371554.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 14742 15458 . + . ID=gene-FJM01_RS01455;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=FJM01_RS01455;old_locus_tag=FJM01_01455 NZ_VFSY01000023.1 Protein Homology CDS 14742 15458 . + 0 ID=cds-WP_140701019.1;Parent=gene-FJM01_RS01455;Dbxref=GenBank:WP_140701019.1;Name=WP_140701019.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: protein motif:HMM:TIGR00138.1;locus_tag=FJM01_RS01455;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_140701019.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 15465 17321 . + . ID=gene-FJM01_RS01460;Name=FJM01_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01460;old_locus_tag=FJM01_01460 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 15465 17321 . + 0 ID=cds-WP_140701020.1;Parent=gene-FJM01_RS01460;Dbxref=GenBank:WP_140701020.1;Name=WP_140701020.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01460;product=hypothetical protein;protein_id=WP_140701020.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 17428 19563 . + . ID=gene-FJM01_RS01465;Name=FJM01_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01465;old_locus_tag=FJM01_01465 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 17428 19563 . + 0 ID=cds-WP_140701021.1;Parent=gene-FJM01_RS01465;Dbxref=GenBank:WP_140701021.1;Name=WP_140701021.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01465;product=hypothetical protein;protein_id=WP_140701021.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 19727 28120 . + . ID=gene-FJM01_RS01470;Name=FJM01_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01470;old_locus_tag=FJM01_01470 NZ_VFSY01000023.1 Protein Homology CDS 19727 28120 . + 0 ID=cds-WP_140701022.1;Parent=gene-FJM01_RS01470;Dbxref=GenBank:WP_140701022.1;Name=WP_140701022.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF014717.8;locus_tag=FJM01_RS01470;product=ABC transporter permease;protein_id=WP_140701022.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 28120 28257 . + . ID=gene-FJM01_RS03255;Name=FJM01_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03255 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 28120 28257 . + 0 ID=cds-WP_186390755.1;Parent=gene-FJM01_RS03255;Dbxref=GenBank:WP_186390755.1;Name=WP_186390755.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03255;product=hypothetical protein;protein_id=WP_186390755.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 28381 29172 . + . ID=gene-FJM01_RS01475;Name=FJM01_RS01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01475;old_locus_tag=FJM01_01475 NZ_VFSY01000023.1 Protein Homology CDS 28381 29172 . + 0 ID=cds-WP_261368954.1;Parent=gene-FJM01_RS01475;Dbxref=GenBank:WP_261368954.1;Name=WP_261368954.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054548.1;locus_tag=FJM01_RS01475;product=ABC transporter ATP-binding protein;protein_id=WP_261368954.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 29303 29638 . + . ID=gene-FJM01_RS01480;Name=FJM01_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01480;old_locus_tag=FJM01_01480 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 29303 29638 . + 0 ID=cds-WP_140701023.1;Parent=gene-FJM01_RS01480;Dbxref=GenBank:WP_140701023.1;Name=WP_140701023.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01480;product=hypothetical protein;protein_id=WP_140701023.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 29824 30390 . - . ID=gene-FJM01_RS01485;Name=FJM01_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01485;old_locus_tag=FJM01_01485 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 29824 30390 . - 0 ID=cds-WP_140701024.1;Parent=gene-FJM01_RS01485;Dbxref=GenBank:WP_140701024.1;Name=WP_140701024.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01485;product=hypothetical protein;protein_id=WP_140701024.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 30486 31796 . + . ID=gene-FJM01_RS03425;Name=FJM01_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03425 NZ_VFSY01000023.1 Protein Homology CDS 30486 31796 . + 0 ID=cds-WP_261368955.1;Parent=gene-FJM01_RS03425;Dbxref=GenBank:WP_261368955.1;Name=WP_261368955.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045833.1;locus_tag=FJM01_RS03425;product=HinT-interacting membrane complex protein P80;protein_id=WP_261368955.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 31714 32634 . + . ID=gene-FJM01_RS03430;Name=FJM01_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03430 NZ_VFSY01000023.1 Protein Homology CDS 31714 32634 . + 0 ID=cds-WP_261368956.1;Parent=gene-FJM01_RS03430;Dbxref=GenBank:WP_261368956.1;Name=WP_261368956.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045833.1;locus_tag=FJM01_RS03430;product=HinT-interacting membrane complex protein P80;protein_id=WP_261368956.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 32646 34385 . + . ID=gene-FJM01_RS01495;Name=FJM01_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01495;old_locus_tag=FJM01_01495 NZ_VFSY01000023.1 Protein Homology CDS 32646 34385 . + 0 ID=cds-WP_140701025.1;Parent=gene-FJM01_RS01495;Dbxref=GenBank:WP_140701025.1;Name=WP_140701025.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045835.1;locus_tag=FJM01_RS01495;product=HinT-interacting membrane complex lipoprotein P60;protein_id=WP_140701025.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 34385 34711 . + . ID=gene-FJM01_RS01500;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=FJM01_RS01500;old_locus_tag=FJM01_01500 NZ_VFSY01000023.1 Protein Homology CDS 34385 34711 . + 0 ID=cds-WP_124724360.1;Parent=gene-FJM01_RS01500;Dbxref=GenBank:WP_124724360.1;Name=WP_124724360.1;gbkey=CDS;gene=hinT;inference=COORDINATES: protein motif:HMM:NF045834.1;locus_tag=FJM01_RS01500;product=histidine triad protein HinT;protein_id=WP_124724360.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 34899 35411 . + . ID=gene-FJM01_RS01505;Name=FJM01_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01505;old_locus_tag=FJM01_01505 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 34899 35411 . + 0 ID=cds-WP_140701026.1;Parent=gene-FJM01_RS01505;Dbxref=GenBank:WP_140701026.1;Name=WP_140701026.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01505;product=hypothetical protein;protein_id=WP_140701026.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 35423 40321 . - . ID=gene-FJM01_RS03530;Name=FJM01_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03530 NZ_VFSY01000023.1 Protein Homology CDS 35423 40321 . - 0 ID=cds-WP_315850232.1;Parent=gene-FJM01_RS03530;Dbxref=GenBank:WP_315850232.1;Name=WP_315850232.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: protein motif:HMM:NF012361.7;locus_tag=FJM01_RS03530;product=valine--tRNA ligase;protein_id=WP_315850232.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 40321 41328 . - . ID=gene-FJM01_RS01515;Name=FJM01_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01515;old_locus_tag=FJM01_01515 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 40321 41328 . - 0 ID=cds-WP_124724364.1;Parent=gene-FJM01_RS01515;Dbxref=GenBank:WP_124724364.1;Name=WP_124724364.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01515;product=ECF transporter S component;protein_id=WP_124724364.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 41362 42468 . - . ID=gene-FJM01_RS01520;Name=FJM01_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01520;old_locus_tag=FJM01_01520 NZ_VFSY01000023.1 Protein Homology CDS 41362 42468 . - 0 ID=cds-WP_140701027.1;Parent=gene-FJM01_RS01520;Dbxref=GenBank:WP_140701027.1;Name=WP_140701027.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015587.7;locus_tag=FJM01_RS01520;product=YhjD/YihY/BrkB family envelope integrity protein;protein_id=WP_140701027.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 42468 43886 . - . ID=gene-FJM01_RS01525;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=FJM01_RS01525;old_locus_tag=FJM01_01525 NZ_VFSY01000023.1 Protein Homology CDS 42468 43886 . - 0 ID=cds-WP_140701028.1;Parent=gene-FJM01_RS01525;Dbxref=GenBank:WP_140701028.1;Name=WP_140701028.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: protein motif:HMM:TIGR00133.1;locus_tag=FJM01_RS01525;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_140701028.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 43879 45207 . - . ID=gene-FJM01_RS01530;Name=FJM01_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01530;old_locus_tag=FJM01_01530 NZ_VFSY01000023.1 Protein Homology CDS 43879 45207 . - 0 ID=cds-WP_140701029.1;Parent=gene-FJM01_RS01530;Dbxref=GenBank:WP_140701029.1;Name=WP_140701029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054483.1;locus_tag=FJM01_RS01530;product=amidase family protein;protein_id=WP_140701029.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 45197 45499 . - . ID=gene-FJM01_RS01535;Name=FJM01_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01535;old_locus_tag=FJM01_01535 NZ_VFSY01000023.1 Protein Homology CDS 45197 45499 . - 0 ID=cds-WP_124724368.1;Parent=gene-FJM01_RS01535;Dbxref=GenBank:WP_124724368.1;Name=WP_124724368.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014716.7;locus_tag=FJM01_RS01535;product=glutamyl-tRNA amidotransferase;protein_id=WP_124724368.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 45509 46342 . - . ID=gene-FJM01_RS01540;Name=FJM01_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01540;old_locus_tag=FJM01_01540 NZ_VFSY01000023.1 Protein Homology CDS 45509 46342 . - 0 ID=cds-WP_124724369.1;Parent=gene-FJM01_RS01540;Dbxref=GenBank:WP_124724369.1;Name=WP_124724369.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: protein motif:HMM:NF013045.7;locus_tag=FJM01_RS01540;product=RluA family pseudouridine synthase;protein_id=WP_124724369.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 46335 46961 . - . ID=gene-FJM01_RS01545;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=FJM01_RS01545;old_locus_tag=FJM01_01545 NZ_VFSY01000023.1 Protein Homology CDS 46335 46961 . - 0 ID=cds-WP_124724370.1;Parent=gene-FJM01_RS01545;Dbxref=GenBank:WP_124724370.1;Name=WP_124724370.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054384.1;locus_tag=FJM01_RS01545;product=SMC-Scp complex subunit ScpB;protein_id=WP_124724370.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 46951 47781 . - . ID=gene-FJM01_RS01550;Name=FJM01_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01550;old_locus_tag=FJM01_01550 NZ_VFSY01000023.1 Protein Homology CDS 46951 47781 . - 0 ID=cds-WP_261368957.1;Parent=gene-FJM01_RS01550;Dbxref=GenBank:WP_261368957.1;Name=WP_261368957.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014654.7;locus_tag=FJM01_RS01550;product=segregation/condensation protein A;protein_id=WP_261368957.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 47791 48588 . - . ID=gene-FJM01_RS01555;Name=FJM01_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01555;old_locus_tag=FJM01_01555 NZ_VFSY01000023.1 Protein Homology CDS 47791 48588 . - 0 ID=cds-WP_140701030.1;Parent=gene-FJM01_RS01555;Dbxref=GenBank:WP_140701030.1;Name=WP_140701030.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: protein motif:HMM:NF013702.7;locus_tag=FJM01_RS01555;product=lysophospholipid acyltransferase family protein;protein_id=WP_140701030.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 48597 48896 . - . ID=gene-FJM01_RS01560;Name=FJM01_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01560;old_locus_tag=FJM01_01560 NZ_VFSY01000023.1 Protein Homology CDS 48597 48896 . - 0 ID=cds-WP_124724373.1;Parent=gene-FJM01_RS01560;Dbxref=GenBank:WP_124724373.1;Name=WP_124724373.1;Ontology_term=GO:0000287,GO:0008897;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: protein motif:HMM:NF013786.7;locus_tag=FJM01_RS01560;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WP_124724373.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 48987 49841 . - . ID=gene-FJM01_RS03435;Name=FJM01_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03435 NZ_VFSY01000023.1 Protein Homology CDS 48987 49841 . - 0 ID=cds-WP_261368958.1;Parent=gene-FJM01_RS03435;Dbxref=GenBank:WP_261368958.1;Name=WP_261368958.1;Ontology_term=GO:0006508,GO:0008234;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF015039.7;locus_tag=FJM01_RS03435;product=C1 family peptidase;protein_id=WP_261368958.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 49789 50319 . - . ID=gene-FJM01_RS03440;Name=FJM01_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03440 NZ_VFSY01000023.1 Protein Homology CDS 49789 50319 . - 0 ID=cds-WP_261368959.1;Parent=gene-FJM01_RS03440;Dbxref=GenBank:WP_261368959.1;Name=WP_261368959.1;Ontology_term=GO:0006508,GO:0070005;gbkey=CDS;go_function=cysteine-type aminopeptidase activity|0070005||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF015039.7;locus_tag=FJM01_RS03440;product=C1 family peptidase;protein_id=WP_261368959.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 50367 51062 . - . ID=gene-FJM01_RS01570;Name=FJM01_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01570;old_locus_tag=FJM01_01570 NZ_VFSY01000023.1 Protein Homology CDS 50367 51062 . - 0 ID=cds-WP_140701031.1;Parent=gene-FJM01_RS01570;Dbxref=GenBank:WP_140701031.1;Name=WP_140701031.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: protein motif:HMM:NF014325.7;locus_tag=FJM01_RS01570;product=potassium channel family protein;protein_id=WP_140701031.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 51234 52781 . + . ID=gene-FJM01_RS01575;Name=FJM01_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01575;old_locus_tag=FJM01_01575 NZ_VFSY01000023.1 Protein Homology CDS 51234 52781 . + 0 ID=cds-WP_140701032.1;Parent=gene-FJM01_RS01575;Dbxref=GenBank:WP_140701032.1;Name=WP_140701032.1;Ontology_term=GO:0030001,GO:0008324,GO:0015079;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,potassium ion transmembrane transporter activity|0015079||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: protein motif:HMM:NF014443.7;locus_tag=FJM01_RS01575;product=TrkH family potassium uptake protein;protein_id=WP_140701032.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 52903 54162 . + . ID=gene-FJM01_RS01580;Name=FJM01_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01580;old_locus_tag=FJM01_01580 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 52903 54162 . + 0 ID=cds-WP_140701033.1;Parent=gene-FJM01_RS01580;Dbxref=GenBank:WP_140701033.1;Name=WP_140701033.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01580;product=SGNH/GDSL hydrolase family protein;protein_id=WP_140701033.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 54117 60842 . + . ID=gene-FJM01_RS01585;Name=FJM01_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01585;old_locus_tag=FJM01_01585 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 54117 60842 . + 0 ID=cds-WP_140701034.1;Parent=gene-FJM01_RS01585;Dbxref=GenBank:WP_140701034.1;Name=WP_140701034.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01585;product=DUF445 domain-containing protein;protein_id=WP_140701034.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 60882 61424 . - . ID=gene-FJM01_RS01590;Name=FJM01_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01590;old_locus_tag=FJM01_01590 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 60882 61424 . - 0 ID=cds-WP_140701035.1;Parent=gene-FJM01_RS01590;Dbxref=GenBank:WP_140701035.1;Name=WP_140701035.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01590;product=hypothetical protein;protein_id=WP_140701035.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 61409 62842 . - . ID=gene-FJM01_RS01595;Name=FJM01_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01595;old_locus_tag=FJM01_01595 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 61409 62842 . - 0 ID=cds-WP_140701036.1;Parent=gene-FJM01_RS01595;Dbxref=GenBank:WP_140701036.1;Name=WP_140701036.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01595;product=hypothetical protein;protein_id=WP_140701036.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 62921 63286 . - . ID=gene-FJM01_RS01600;Name=FJM01_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01600;old_locus_tag=FJM01_01600 NZ_VFSY01000023.1 Protein Homology CDS 62921 63286 . - 0 ID=cds-WP_124724380.1;Parent=gene-FJM01_RS01600;Dbxref=GenBank:WP_124724380.1;Name=WP_124724380.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014838.7;locus_tag=FJM01_RS01600;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_124724380.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 63286 64725 . - . ID=gene-FJM01_RS01605;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=FJM01_RS01605;old_locus_tag=FJM01_01605 NZ_VFSY01000023.1 Protein Homology CDS 63286 64725 . - 0 ID=cds-WP_124724655.1;Parent=gene-FJM01_RS01605;Dbxref=GenBank:WP_124724655.1;Name=WP_124724655.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011386984.1;locus_tag=FJM01_RS01605;product=F0F1 ATP synthase subunit beta;protein_id=WP_124724655.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 64809 65660 . - . ID=gene-FJM01_RS01610;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=FJM01_RS01610;old_locus_tag=FJM01_01610 NZ_VFSY01000023.1 Protein Homology CDS 64809 65660 . - 0 ID=cds-WP_334199150.1;Parent=gene-FJM01_RS01610;Dbxref=GenBank:WP_334199150.1;Name=WP_334199150.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: protein motif:HMM:NF012456.7;locus_tag=FJM01_RS01610;product=ATP synthase F1 subunit gamma;protein_id=WP_334199150.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 65664 67247 . - . ID=gene-FJM01_RS01615;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=FJM01_RS01615;old_locus_tag=FJM01_01615 NZ_VFSY01000023.1 Protein Homology CDS 65664 67247 . - 0 ID=cds-WP_140701037.1;Parent=gene-FJM01_RS01615;Dbxref=GenBank:WP_140701037.1;Name=WP_140701037.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015545272.1;locus_tag=FJM01_RS01615;product=F0F1 ATP synthase subunit alpha;protein_id=WP_140701037.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 67262 67792 . - . ID=gene-FJM01_RS01620;Name=FJM01_RS01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01620;old_locus_tag=FJM01_01620 NZ_VFSY01000023.1 Protein Homology CDS 67262 67792 . - 0 ID=cds-WP_140701038.1;Parent=gene-FJM01_RS01620;Dbxref=GenBank:WP_140701038.1;Name=WP_140701038.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF009975.0;locus_tag=FJM01_RS01620;product=F0F1 ATP synthase subunit delta;protein_id=WP_140701038.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 67797 68354 . - . ID=gene-FJM01_RS01625;Name=FJM01_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01625;old_locus_tag=FJM01_01625 NZ_VFSY01000023.1 Protein Homology CDS 67797 68354 . - 0 ID=cds-WP_140701039.1;Parent=gene-FJM01_RS01625;Dbxref=GenBank:WP_140701039.1;Name=WP_140701039.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: protein motif:HMM:NF012645.7;locus_tag=FJM01_RS01625;product=F0F1 ATP synthase subunit B family protein;protein_id=WP_140701039.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 68367 68657 . - . ID=gene-FJM01_RS01630;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=FJM01_RS01630;old_locus_tag=FJM01_01630 NZ_VFSY01000023.1 Protein Homology CDS 68367 68657 . - 0 ID=cds-WP_186390756.1;Parent=gene-FJM01_RS01630;Dbxref=GenBank:WP_186390756.1;Name=WP_186390756.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpE;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054208.1;locus_tag=FJM01_RS01630;product=ATP synthase F0 subunit C;protein_id=WP_186390756.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 68667 69518 . - . ID=gene-FJM01_RS01635;Name=FJM01_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01635;old_locus_tag=FJM01_01635 NZ_VFSY01000023.1 Protein Homology CDS 68667 69518 . - 0 ID=cds-WP_140701040.1;Parent=gene-FJM01_RS01635;Dbxref=GenBank:WP_140701040.1;Name=WP_140701040.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF004487.0;locus_tag=FJM01_RS01635;product=F0F1 ATP synthase subunit A;protein_id=WP_140701040.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 69496 69846 . - . ID=gene-FJM01_RS01640;Name=FJM01_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01640;old_locus_tag=FJM01_01640 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 69496 69846 . - 0 ID=cds-WP_140701041.1;Parent=gene-FJM01_RS01640;Dbxref=GenBank:WP_140701041.1;Name=WP_140701041.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01640;product=hypothetical protein;protein_id=WP_140701041.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 70205 72343 . + . ID=gene-FJM01_RS01645;Name=FJM01_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01645;old_locus_tag=FJM01_01645 NZ_VFSY01000023.1 Protein Homology CDS 70205 72343 . + 0 ID=cds-WP_140701042.1;Parent=gene-FJM01_RS01645;Dbxref=GenBank:WP_140701042.1;Name=WP_140701042.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004427087.1;locus_tag=FJM01_RS01645;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_140701042.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 72424 72499 . - . ID=gene-FJM01_RS01650;Name=FJM01_RS01650;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS01650;old_locus_tag=FJM01_01650 NZ_VFSY01000023.1 tRNAscan-SE tRNA 72424 72499 . - . ID=rna-FJM01_RS01650;Parent=gene-FJM01_RS01650;anticodon=(pos:complement(72464..72466));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS01650;product=tRNA-Lys NZ_VFSY01000023.1 tRNAscan-SE exon 72424 72499 . - . ID=exon-FJM01_RS01650-1;Parent=rna-FJM01_RS01650;anticodon=(pos:complement(72464..72466));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS01650;product=tRNA-Lys NZ_VFSY01000023.1 RefSeq gene 72744 73670 . + . ID=gene-FJM01_RS01655;Name=FJM01_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01655;old_locus_tag=FJM01_01655 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 72744 73670 . + 0 ID=cds-WP_140701043.1;Parent=gene-FJM01_RS01655;Dbxref=GenBank:WP_140701043.1;Name=WP_140701043.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01655;product=variable surface lipoprotein;protein_id=WP_140701043.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 73686 73865 . + . ID=gene-FJM01_RS01660;Name=FJM01_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01660;old_locus_tag=FJM01_01660 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 73686 73865 . + 0 ID=cds-WP_140701044.1;Parent=gene-FJM01_RS01660;Dbxref=GenBank:WP_140701044.1;Name=WP_140701044.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01660;product=hypothetical protein;protein_id=WP_140701044.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 73898 74338 . + . ID=gene-FJM01_RS01665;Name=FJM01_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01665;old_locus_tag=FJM01_01665 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 73898 74338 . + 0 ID=cds-WP_140701046.1;Parent=gene-FJM01_RS01665;Dbxref=GenBank:WP_140701046.1;Name=WP_140701046.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01665;product=hypothetical protein;protein_id=WP_140701046.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 74381 74454 . - . ID=gene-FJM01_RS01670;Name=FJM01_RS01670;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS01670;old_locus_tag=FJM01_01670 NZ_VFSY01000023.1 tRNAscan-SE tRNA 74381 74454 . - . ID=rna-FJM01_RS01670;Parent=gene-FJM01_RS01670;anticodon=(pos:complement(74420..74422));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS01670;product=tRNA-Trp NZ_VFSY01000023.1 tRNAscan-SE exon 74381 74454 . - . ID=exon-FJM01_RS01670-1;Parent=rna-FJM01_RS01670;anticodon=(pos:complement(74420..74422));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS01670;product=tRNA-Trp NZ_VFSY01000023.1 RefSeq gene 74467 75570 . - . ID=gene-FJM01_RS01675;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=FJM01_RS01675;old_locus_tag=FJM01_01675 NZ_VFSY01000023.1 Protein Homology CDS 74467 75570 . - 0 ID=cds-WP_124724389.1;Parent=gene-FJM01_RS01675;Dbxref=GenBank:WP_124724389.1;Name=WP_124724389.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054717.1;locus_tag=FJM01_RS01675;product=redox-regulated ATPase YchF;protein_id=WP_124724389.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 75744 76319 . + . ID=gene-FJM01_RS01680;Name=FJM01_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01680;old_locus_tag=FJM01_01680 NZ_VFSY01000023.1 Protein Homology CDS 75744 76319 . + 0 ID=cds-WP_140701048.1;Parent=gene-FJM01_RS01680;Dbxref=GenBank:WP_140701048.1;Name=WP_140701048.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF003296.0;locus_tag=FJM01_RS01680;product=thymidine kinase;protein_id=WP_140701048.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 76367 76442 . - . ID=gene-FJM01_RS01685;Name=FJM01_RS01685;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS01685;old_locus_tag=FJM01_01685 NZ_VFSY01000023.1 tRNAscan-SE tRNA 76367 76442 . - . ID=rna-FJM01_RS01685;Parent=gene-FJM01_RS01685;anticodon=(pos:complement(76407..76409));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS01685;product=tRNA-His NZ_VFSY01000023.1 tRNAscan-SE exon 76367 76442 . - . ID=exon-FJM01_RS01685-1;Parent=rna-FJM01_RS01685;anticodon=(pos:complement(76407..76409));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS01685;product=tRNA-His NZ_VFSY01000023.1 RefSeq gene 76505 76796 . + . ID=gene-FJM01_RS01690;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=FJM01_RS01690;old_locus_tag=FJM01_01690 NZ_VFSY01000023.1 cmsearch RNase_P_RNA 76505 76796 . + . ID=rna-FJM01_RS01690;Parent=gene-FJM01_RS01690;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=FJM01_RS01690;product=RNase P RNA component class B NZ_VFSY01000023.1 cmsearch exon 76505 76796 . + . ID=exon-FJM01_RS01690-1;Parent=rna-FJM01_RS01690;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=FJM01_RS01690;product=RNase P RNA component class B NZ_VFSY01000023.1 RefSeq gene 76892 77644 . + . ID=gene-FJM01_RS01695;Name=FJM01_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01695;old_locus_tag=FJM01_01695 NZ_VFSY01000023.1 Protein Homology CDS 76892 77644 . + 0 ID=cds-WP_124724391.1;Parent=gene-FJM01_RS01695;Dbxref=GenBank:WP_124724391.1;Name=WP_124724391.1;Ontology_term=GO:0009294;gbkey=CDS;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: protein motif:HMM:NF014533.8;locus_tag=FJM01_RS01695;product=DNA-processing protein DprA;protein_id=WP_124724391.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 77721 78437 . + . ID=gene-FJM01_RS01700;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=FJM01_RS01700;old_locus_tag=FJM01_01700 NZ_VFSY01000023.1 Protein Homology CDS 77721 78437 . + 0 ID=cds-WP_124724392.1;Parent=gene-FJM01_RS01700;Dbxref=GenBank:WP_124724392.1;Name=WP_124724392.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054537.1;locus_tag=FJM01_RS01700;product=purine-nucleoside phosphorylase;protein_id=WP_124724392.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 78447 79742 . + . ID=gene-FJM01_RS01705;Name=FJM01_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01705;old_locus_tag=FJM01_01705 NZ_VFSY01000023.1 Protein Homology CDS 78447 79742 . + 0 ID=cds-WP_140701050.1;Parent=gene-FJM01_RS01705;Dbxref=GenBank:WP_140701050.1;Name=WP_140701050.1;Ontology_term=GO:0006206;gbkey=CDS;go_process=pyrimidine nucleobase metabolic process|0006206||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054669.1;locus_tag=FJM01_RS01705;product=thymidine phosphorylase;protein_id=WP_140701050.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 79774 80439 . + . ID=gene-FJM01_RS01710;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=FJM01_RS01710;old_locus_tag=FJM01_01710 NZ_VFSY01000023.1 Protein Homology CDS 79774 80439 . + 0 ID=cds-WP_124724394.1;Parent=gene-FJM01_RS01710;Dbxref=GenBank:WP_124724394.1;Name=WP_124724394.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008363468.1;locus_tag=FJM01_RS01710;product=deoxyribose-phosphate aldolase;protein_id=WP_124724394.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 80561 81061 . + . ID=gene-FJM01_RS03605;Name=FJM01_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03605 NZ_VFSY01000023.1 Protein Homology CDS 80561 81061 . + 0 ID=cds-WP_334199146.1;Parent=gene-FJM01_RS03605;Dbxref=GenBank:WP_334199146.1;Name=WP_334199146.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: protein motif:HMM:TIGR01484.1;locus_tag=FJM01_RS03605;product=HAD-IIB family hydrolase;protein_id=WP_334199146.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 81045 81509 . + . ID=gene-FJM01_RS03610;Name=FJM01_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03610 NZ_VFSY01000023.1 Protein Homology CDS 81045 81509 . + 0 ID=cds-WP_334199147.1;Parent=gene-FJM01_RS03610;Dbxref=GenBank:WP_334199147.1;Name=WP_334199147.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: protein motif:HMM:NF019887.7;locus_tag=FJM01_RS03610;product=HAD-IIB family hydrolase;protein_id=WP_334199147.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 81533 82246 . + . ID=gene-FJM01_RS01720;Name=FJM01_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01720;old_locus_tag=FJM01_01720 NZ_VFSY01000023.1 Protein Homology CDS 81533 82246 . + 0 ID=cds-WP_140701051.1;Parent=gene-FJM01_RS01720;Dbxref=GenBank:WP_140701051.1;Name=WP_140701051.1;Ontology_term=GO:0006401,GO:0016070,GO:0000287,GO:0003723,GO:0004523;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=RNA catabolic process|0006401||IEA,RNA metabolic process|0016070||IEA;inference=COORDINATES: protein motif:HMM:NF013514.8;locus_tag=FJM01_RS01720;product=ribonuclease HIII;protein_id=WP_140701051.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 82258 83871 . - . ID=gene-FJM01_RS01725;Name=FJM01_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01725;old_locus_tag=FJM01_01725 NZ_VFSY01000023.1 Protein Homology CDS 82258 83871 . - 0 ID=cds-WP_140701053.1;Parent=gene-FJM01_RS01725;Dbxref=GenBank:WP_140701053.1;Name=WP_140701053.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054622.1;locus_tag=FJM01_RS01725;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_140701053.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 83964 84602 . - . ID=gene-FJM01_RS01730;Name=FJM01_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01730;old_locus_tag=FJM01_01730 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 83964 84602 . - 0 ID=cds-WP_140701055.1;Parent=gene-FJM01_RS01730;Dbxref=GenBank:WP_140701055.1;Name=WP_140701055.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01730;product=hypothetical protein;protein_id=WP_140701055.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 84751 85290 . - . ID=gene-FJM01_RS01735;Name=FJM01_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01735;old_locus_tag=FJM01_01735 NZ_VFSY01000023.1 Protein Homology CDS 84751 85290 . - 0 ID=cds-WP_124724398.1;Parent=gene-FJM01_RS01735;Dbxref=GenBank:WP_124724398.1;Name=WP_124724398.1;Ontology_term=GO:0008379,GO:0016209,GO:0051920;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA,antioxidant activity|0016209||IEA,peroxiredoxin activity|0051920||IEA;inference=COORDINATES: protein motif:HMM:NF020123.7;locus_tag=FJM01_RS01735;product=peroxiredoxin;protein_id=WP_124724398.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 85299 86435 . - . ID=gene-FJM01_RS01740;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=FJM01_RS01740;old_locus_tag=FJM01_01740 NZ_VFSY01000023.1 Protein Homology CDS 85299 86435 . - 0 ID=cds-WP_140701057.1;Parent=gene-FJM01_RS01740;Dbxref=GenBank:WP_140701057.1;Name=WP_140701057.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862746.1;locus_tag=FJM01_RS01740;product=methionine adenosyltransferase;protein_id=WP_140701057.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 86604 87527 . - . ID=gene-FJM01_RS01745;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=FJM01_RS01745;old_locus_tag=FJM01_01745 NZ_VFSY01000023.1 Protein Homology CDS 86604 87527 . - 0 ID=cds-WP_334199151.1;Parent=gene-FJM01_RS01745;Dbxref=GenBank:WP_334199151.1;Name=WP_334199151.1;Ontology_term=GO:0070981,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: protein motif:HMM:NF015548.7;locus_tag=FJM01_RS01745;product=aspartate--ammonia ligase;protein_id=WP_334199151.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 87649 88395 . + . ID=gene-FJM01_RS01750;Name=FJM01_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01750;old_locus_tag=FJM01_01750 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 87649 88395 . + 0 ID=cds-WP_140701059.1;Parent=gene-FJM01_RS01750;Dbxref=GenBank:WP_140701059.1;Name=WP_140701059.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01750;product=hypothetical protein;protein_id=WP_140701059.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 88442 89635 . - . ID=gene-FJM01_RS01755;Name=FJM01_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01755;old_locus_tag=FJM01_01755 NZ_VFSY01000023.1 Protein Homology CDS 88442 89635 . - 0 ID=cds-WP_140701061.1;Parent=gene-FJM01_RS01755;Dbxref=GenBank:WP_140701061.1;Name=WP_140701061.1;Ontology_term=GO:0006094,GO:0006096,GO:0000166,GO:0004618;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,phosphoglycerate kinase activity|0004618||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054739.1;locus_tag=FJM01_RS01755;product=phosphoglycerate kinase;protein_id=WP_140701061.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 89735 90145 . + . ID=gene-FJM01_RS01760;Name=FJM01_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01760;old_locus_tag=FJM01_01760 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 89735 90145 . + 0 ID=cds-WP_124724403.1;Parent=gene-FJM01_RS01760;Dbxref=GenBank:WP_124724403.1;Name=WP_124724403.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01760;product=hypothetical protein;protein_id=WP_124724403.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 90154 90558 . + . ID=gene-FJM01_RS01765;Name=FJM01_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01765;old_locus_tag=FJM01_01765 NZ_VFSY01000023.1 Protein Homology CDS 90154 90558 . + 0 ID=cds-WP_334199148.1;Parent=gene-FJM01_RS01765;Dbxref=GenBank:WP_334199148.1;Name=WP_334199148.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014510.7;locus_tag=FJM01_RS01765;product=DNA integrity scanning protein DisA nucleotide-binding domain protein;protein_id=WP_334199148.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 90587 90736 . + . ID=gene-FJM01_RS03615;Name=FJM01_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03615 NZ_VFSY01000023.1 Protein Homology CDS 90587 90736 . + 0 ID=cds-WP_334199149.1;Parent=gene-FJM01_RS03615;Dbxref=GenBank:WP_334199149.1;Name=WP_334199149.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014510.7;locus_tag=FJM01_RS03615;product=hypothetical protein;protein_id=WP_334199149.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 91352 92047 . - . ID=gene-FJM01_RS01770;Name=FJM01_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01770;old_locus_tag=FJM01_01770 NZ_VFSY01000023.1 GeneMarkS-2+ CDS 91352 92047 . - 0 ID=cds-WP_140701063.1;Parent=gene-FJM01_RS01770;Dbxref=GenBank:WP_140701063.1;Name=WP_140701063.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01770;product=hypothetical protein;protein_id=WP_140701063.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 92294 93487 . + . ID=gene-FJM01_RS01775;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=FJM01_RS01775;old_locus_tag=FJM01_01775 NZ_VFSY01000023.1 Protein Homology CDS 92294 93487 . + 0 ID=cds-WP_124724406.1;Parent=gene-FJM01_RS01775;Dbxref=GenBank:WP_124724406.1;Name=WP_124724406.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004428385.1;locus_tag=FJM01_RS01775;product=elongation factor Tu;protein_id=WP_124724406.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 93575 95014 . - . ID=gene-FJM01_RS01780;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=FJM01_RS01780;old_locus_tag=FJM01_01780 NZ_VFSY01000023.1 Protein Homology CDS 93575 95014 . - 0 ID=cds-WP_140701065.1;Parent=gene-FJM01_RS01780;Dbxref=GenBank:WP_140701065.1;Name=WP_140701065.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: protein motif:HMM:NF014680.7;locus_tag=FJM01_RS01780;product=DNA recombination protein RmuC;protein_id=WP_140701065.1;transl_table=4 NZ_VFSY01000023.1 RefSeq gene 95096 95615 . + . ID=gene-FJM01_RS01785;Name=FJM01_RS01785;end_range=95615,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01785;old_locus_tag=FJM01_01785;partial=true NZ_VFSY01000023.1 Protein Homology CDS 95096 95615 . + 0 ID=cds-WP_140701067.1;Parent=gene-FJM01_RS01785;Dbxref=GenBank:WP_140701067.1;Name=WP_140701067.1;end_range=95615,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033817.2;locus_tag=FJM01_RS01785;partial=true;product=variable surface lipoprotein;protein_id=WP_140701067.1;transl_table=4 ##sequence-region NZ_VFSY01000005.1 1 1584 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000005.1 RefSeq region 1 1584 . + . ID=NZ_VFSY01000005.1:1..1584;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000005.1 RefSeq gene 1 1584 . - . ID=gene-FJM01_RS03215;Name=FJM01_RS03215;end_range=1584,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03215;partial=true;start_range=.,1 NZ_VFSY01000005.1 GeneMarkS-2+ CDS 1 1584 . - 2 ID=cds-WP_186390740.1;Parent=gene-FJM01_RS03215;Dbxref=GenBank:WP_186390740.1;Name=WP_186390740.1;end_range=1584,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03215;partial=true;product=hypothetical protein;protein_id=WP_186390740.1;start_range=.,1;transl_table=4 ##sequence-region NZ_VFSY01000006.1 1 798 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000006.1 RefSeq region 1 798 . + . ID=NZ_VFSY01000006.1:1..798;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000006.1 RefSeq gene 1 798 . - . ID=gene-FJM01_RS03220;Name=FJM01_RS03220;end_range=798,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03220;partial=true;start_range=.,1 NZ_VFSY01000006.1 GeneMarkS-2+ CDS 1 798 . - 2 ID=cds-WP_186390741.1;Parent=gene-FJM01_RS03220;Dbxref=GenBank:WP_186390741.1;Name=WP_186390741.1;end_range=798,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03220;partial=true;product=hypothetical protein;protein_id=WP_186390741.1;start_range=.,1;transl_table=4 ##sequence-region NZ_VFSY01000027.1 1 39383 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000027.1 RefSeq region 1 39383 . + . ID=NZ_VFSY01000027.1:1..39383;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000027.1 RefSeq gene 1 878 . - . ID=gene-FJM01_RS02585;Name=FJM01_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02585;old_locus_tag=FJM01_02585;partial=true;start_range=.,1 NZ_VFSY01000027.1 Protein Homology CDS 1 878 . - 0 ID=cds-WP_140701251.1;Parent=gene-FJM01_RS02585;Dbxref=GenBank:WP_140701251.1;Name=WP_140701251.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054718.1;locus_tag=FJM01_RS02585;partial=true;product=glycine--tRNA ligase;protein_id=WP_140701251.1;start_range=.,1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 1022 2335 . + . ID=gene-FJM01_RS02590;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=FJM01_RS02590;old_locus_tag=FJM01_02590 NZ_VFSY01000027.1 Protein Homology CDS 1022 2335 . + 0 ID=cds-WP_334199160.1;Parent=gene-FJM01_RS02590;Dbxref=GenBank:WP_334199160.1;Name=WP_334199160.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054790.1;locus_tag=FJM01_RS02590;product=signal recognition particle protein;protein_id=WP_334199160.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 2437 4566 . - . ID=gene-FJM01_RS02595;Name=FJM01_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02595;old_locus_tag=FJM01_02595 NZ_VFSY01000027.1 GeneMarkS-2+ CDS 2437 4566 . - 0 ID=cds-WP_140701257.1;Parent=gene-FJM01_RS02595;Dbxref=GenBank:WP_140701257.1;Name=WP_140701257.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02595;product=SGNH/GDSL hydrolase family protein;protein_id=WP_140701257.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 4568 5401 . - . ID=gene-FJM01_RS02600;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=FJM01_RS02600;old_locus_tag=FJM01_02600 NZ_VFSY01000027.1 Protein Homology CDS 4568 5401 . - 0 ID=cds-WP_140701259.1;Parent=gene-FJM01_RS02600;Dbxref=GenBank:WP_140701259.1;Name=WP_140701259.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: protein motif:HMM:TIGR03596.1;locus_tag=FJM01_RS02600;product=ribosome biogenesis GTPase YlqF;protein_id=WP_140701259.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 5408 5935 . - . ID=gene-FJM01_RS02605;Name=FJM01_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02605;old_locus_tag=FJM01_02605 NZ_VFSY01000027.1 Protein Homology CDS 5408 5935 . - 0 ID=cds-WP_140701261.1;Parent=gene-FJM01_RS02605;Dbxref=GenBank:WP_140701261.1;Name=WP_140701261.1;Ontology_term=GO:0030488,GO:0003723,GO:0008175,GO:0141098,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,tRNA methyltransferase activity|0008175||IEA,tRNA (cytidine(34)-2'-O)-methyltransferase activity|0141098||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054329.1;locus_tag=FJM01_RS02605;product=tRNA (cytidine(34)-2'-O)-methyltransferase;protein_id=WP_140701261.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 6109 6375 . - . ID=gene-FJM01_RS02610;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=FJM01_RS02610;old_locus_tag=FJM01_02610 NZ_VFSY01000027.1 Protein Homology CDS 6109 6375 . - 0 ID=cds-WP_140701263.1;Parent=gene-FJM01_RS02610;Dbxref=GenBank:WP_140701263.1;Name=WP_140701263.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054804.1;locus_tag=FJM01_RS02610;product=30S ribosomal protein S15;protein_id=WP_140701263.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 6527 6603 . - . ID=gene-FJM01_RS02615;Name=FJM01_RS02615;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS02615;old_locus_tag=FJM01_02615 NZ_VFSY01000027.1 tRNAscan-SE tRNA 6527 6603 . - . ID=rna-FJM01_RS02615;Parent=gene-FJM01_RS02615;anticodon=(pos:complement(6567..6569));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02615;product=tRNA-Ile NZ_VFSY01000027.1 tRNAscan-SE exon 6527 6603 . - . ID=exon-FJM01_RS02615-1;Parent=rna-FJM01_RS02615;anticodon=(pos:complement(6567..6569));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02615;product=tRNA-Ile NZ_VFSY01000027.1 RefSeq gene 6653 7051 . - . ID=gene-FJM01_RS02620;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=FJM01_RS02620;old_locus_tag=FJM01_02620 NZ_VFSY01000027.1 Protein Homology CDS 6653 7051 . - 0 ID=cds-WP_124724545.1;Parent=gene-FJM01_RS02620;Dbxref=GenBank:WP_124724545.1;Name=WP_124724545.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429105.1;locus_tag=FJM01_RS02620;product=30S ribosomal protein S9;protein_id=WP_124724545.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 7051 7485 . - . ID=gene-FJM01_RS02625;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=FJM01_RS02625;old_locus_tag=FJM01_02625 NZ_VFSY01000027.1 Protein Homology CDS 7051 7485 . - 0 ID=cds-WP_124724546.1;Parent=gene-FJM01_RS02625;Dbxref=GenBank:WP_124724546.1;Name=WP_124724546.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054672.1;locus_tag=FJM01_RS02625;product=50S ribosomal protein L13;protein_id=WP_124724546.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 7570 8232 . - . ID=gene-FJM01_RS02630;Name=FJM01_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02630;old_locus_tag=FJM01_02630 NZ_VFSY01000027.1 Protein Homology CDS 7570 8232 . - 0 ID=cds-WP_124724547.1;Parent=gene-FJM01_RS02630;Dbxref=GenBank:WP_124724547.1;Name=WP_124724547.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF008701.0;locus_tag=FJM01_RS02630;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_124724547.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 8281 8682 . - . ID=gene-FJM01_RS02635;Name=FJM01_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02635;old_locus_tag=FJM01_02635 NZ_VFSY01000027.1 Protein Homology CDS 8281 8682 . - 0 ID=cds-WP_124724548.1;Parent=gene-FJM01_RS02635;Dbxref=GenBank:WP_124724548.1;Name=WP_124724548.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270;gbkey=CDS;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054166.1;locus_tag=FJM01_RS02635;product=cytidine deaminase;protein_id=WP_124724548.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 8833 9084 . + . ID=gene-FJM01_RS02640;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=FJM01_RS02640;old_locus_tag=FJM01_02640 NZ_VFSY01000027.1 Protein Homology CDS 8833 9084 . + 0 ID=cds-WP_124724549.1;Parent=gene-FJM01_RS02640;Dbxref=GenBank:WP_124724549.1;Name=WP_124724549.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054254.1;locus_tag=FJM01_RS02640;product=30S ribosomal protein S16;protein_id=WP_124724549.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 9099 9776 . + . ID=gene-FJM01_RS02645;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=FJM01_RS02645;old_locus_tag=FJM01_02645 NZ_VFSY01000027.1 Protein Homology CDS 9099 9776 . + 0 ID=cds-WP_124724550.1;Parent=gene-FJM01_RS02645;Dbxref=GenBank:WP_124724550.1;Name=WP_124724550.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054343.1;locus_tag=FJM01_RS02645;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_124724550.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 9766 10122 . + . ID=gene-FJM01_RS02650;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=FJM01_RS02650;old_locus_tag=FJM01_02650 NZ_VFSY01000027.1 Protein Homology CDS 9766 10122 . + 0 ID=cds-WP_124724551.1;Parent=gene-FJM01_RS02650;Dbxref=GenBank:WP_124724551.1;Name=WP_124724551.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054398.1;locus_tag=FJM01_RS02650;product=50S ribosomal protein L19;protein_id=WP_124724551.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 10291 10701 . + . ID=gene-FJM01_RS02655;Name=FJM01_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02655;old_locus_tag=FJM01_02655 NZ_VFSY01000027.1 GeneMarkS-2+ CDS 10291 10701 . + 0 ID=cds-WP_140701265.1;Parent=gene-FJM01_RS02655;Dbxref=GenBank:WP_140701265.1;Name=WP_140701265.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02655;product=DUF4190 domain-containing protein;protein_id=WP_140701265.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 10715 11953 . - . ID=gene-FJM01_RS02660;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=FJM01_RS02660;old_locus_tag=FJM01_02660 NZ_VFSY01000027.1 Protein Homology CDS 10715 11953 . - 0 ID=cds-WP_140701267.1;Parent=gene-FJM01_RS02660;Dbxref=GenBank:WP_140701267.1;Name=WP_140701267.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054660.1;locus_tag=FJM01_RS02660;product=tyrosine--tRNA ligase;protein_id=WP_140701267.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 12058 12948 . + . ID=gene-FJM01_RS02665;Name=FJM01_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02665;old_locus_tag=FJM01_02665 NZ_VFSY01000027.1 Protein Homology CDS 12058 12948 . + 0 ID=cds-WP_124724554.1;Parent=gene-FJM01_RS02665;Dbxref=GenBank:WP_124724554.1;Name=WP_124724554.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014679.7;locus_tag=FJM01_RS02665;product=DegV family protein;protein_id=WP_124724554.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 12983 13249 . - . ID=gene-FJM01_RS02670;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=FJM01_RS02670;old_locus_tag=FJM01_02670 NZ_VFSY01000027.1 Protein Homology CDS 12983 13249 . - 0 ID=cds-WP_124724555.1;Parent=gene-FJM01_RS02670;Dbxref=GenBank:WP_124724555.1;Name=WP_124724555.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054482.1;locus_tag=FJM01_RS02670;product=50S ribosomal protein L27;protein_id=WP_124724555.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 13256 13561 . - . ID=gene-FJM01_RS02675;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=FJM01_RS02675;old_locus_tag=FJM01_02675 NZ_VFSY01000027.1 Protein Homology CDS 13256 13561 . - 0 ID=cds-WP_140701269.1;Parent=gene-FJM01_RS02675;Dbxref=GenBank:WP_140701269.1;Name=WP_140701269.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387287.1;locus_tag=FJM01_RS02675;product=50S ribosomal protein L21;protein_id=WP_140701269.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 13707 18149 . - . ID=gene-FJM01_RS02680;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=FJM01_RS02680;old_locus_tag=FJM01_02680 NZ_VFSY01000027.1 Protein Homology CDS 13707 18149 . - 0 ID=cds-WP_140701271.1;Parent=gene-FJM01_RS02680;Dbxref=GenBank:WP_140701271.1;Name=WP_140701271.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: protein motif:HMM:NF016858.7;locus_tag=FJM01_RS02680;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_140701271.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 18149 20749 . - . ID=gene-FJM01_RS02685;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=FJM01_RS02685;old_locus_tag=FJM01_02685 NZ_VFSY01000027.1 Protein Homology CDS 18149 20749 . - 0 ID=cds-WP_334199161.1;Parent=gene-FJM01_RS02685;Dbxref=GenBank:WP_334199161.1;Name=WP_334199161.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0032549;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,ribonucleoside binding|0032549||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: protein motif:HMM:NF001616.1;locus_tag=FJM01_RS02685;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_334199161.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 20778 21743 . - . ID=gene-FJM01_RS03630;Name=FJM01_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03630 NZ_VFSY01000027.1 Protein Homology CDS 20778 21743 . - 0 ID=cds-WP_334199162.1;Parent=gene-FJM01_RS03630;Dbxref=GenBank:WP_334199162.1;Name=WP_334199162.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016448.7;locus_tag=FJM01_RS03630;product=hypothetical protein;protein_id=WP_334199162.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 21884 22258 . - . ID=gene-FJM01_RS02690;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=FJM01_RS02690;old_locus_tag=FJM01_02690 NZ_VFSY01000027.1 Protein Homology CDS 21884 22258 . - 0 ID=cds-WP_140701273.1;Parent=gene-FJM01_RS02690;Dbxref=GenBank:WP_140701273.1;Name=WP_140701273.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054657.1;locus_tag=FJM01_RS02690;product=50S ribosomal protein L7/L12;protein_id=WP_140701273.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 22278 22775 . - . ID=gene-FJM01_RS02695;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=FJM01_RS02695;old_locus_tag=FJM01_02695 NZ_VFSY01000027.1 Protein Homology CDS 22278 22775 . - 0 ID=cds-WP_140701275.1;Parent=gene-FJM01_RS02695;Dbxref=GenBank:WP_140701275.1;Name=WP_140701275.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:NF000955.1;locus_tag=FJM01_RS02695;product=50S ribosomal protein L10;protein_id=WP_140701275.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 22942 25035 . - . ID=gene-FJM01_RS02700;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=FJM01_RS02700;old_locus_tag=FJM01_02700 NZ_VFSY01000027.1 Protein Homology CDS 22942 25035 . - 0 ID=cds-WP_140701277.1;Parent=gene-FJM01_RS02700;Dbxref=GenBank:WP_140701277.1;Name=WP_140701277.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447517.1;locus_tag=FJM01_RS02700;product=elongation factor G;protein_id=WP_140701277.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 25059 25529 . - . ID=gene-FJM01_RS02705;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=FJM01_RS02705;old_locus_tag=FJM01_02705 NZ_VFSY01000027.1 Protein Homology CDS 25059 25529 . - 0 ID=cds-WP_124724562.1;Parent=gene-FJM01_RS02705;Dbxref=GenBank:WP_124724562.1;Name=WP_124724562.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054539.1;locus_tag=FJM01_RS02705;product=30S ribosomal protein S7;protein_id=WP_124724562.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 25555 25971 . - . ID=gene-FJM01_RS02710;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=FJM01_RS02710;old_locus_tag=FJM01_02710 NZ_VFSY01000027.1 Protein Homology CDS 25555 25971 . - 0 ID=cds-WP_124724563.1;Parent=gene-FJM01_RS02710;Dbxref=GenBank:WP_124724563.1;Name=WP_124724563.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014582830.1;locus_tag=FJM01_RS02710;product=30S ribosomal protein S12;protein_id=WP_124724563.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 26135 27223 . - . ID=gene-FJM01_RS02715;Name=FJM01_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02715;old_locus_tag=FJM01_02715 NZ_VFSY01000027.1 GeneMarkS-2+ CDS 26135 27223 . - 0 ID=cds-WP_140701279.1;Parent=gene-FJM01_RS02715;Dbxref=GenBank:WP_140701279.1;Name=WP_140701279.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02715;product=hypothetical protein;protein_id=WP_140701279.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 27216 28136 . - . ID=gene-FJM01_RS02720;Name=FJM01_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02720;old_locus_tag=FJM01_02720 NZ_VFSY01000027.1 GeneMarkS-2+ CDS 27216 28136 . - 0 ID=cds-WP_140701281.1;Parent=gene-FJM01_RS02720;Dbxref=GenBank:WP_140701281.1;Name=WP_140701281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02720;product=hypothetical protein;protein_id=WP_140701281.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 28193 29086 . - . ID=gene-FJM01_RS02725;Name=FJM01_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02725;old_locus_tag=FJM01_02725 NZ_VFSY01000027.1 Protein Homology CDS 28193 29086 . - 0 ID=cds-WP_140701283.1;Parent=gene-FJM01_RS02725;Dbxref=GenBank:WP_140701283.1;Name=WP_140701283.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: protein motif:HMM:TIGR00005.1;locus_tag=FJM01_RS02725;product=RluA family pseudouridine synthase;protein_id=WP_140701283.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 29123 29467 . + . ID=gene-FJM01_RS02730;Name=FJM01_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02730;old_locus_tag=FJM01_02730 NZ_VFSY01000027.1 Protein Homology CDS 29123 29467 . + 0 ID=cds-WP_124724567.1;Parent=gene-FJM01_RS02730;Dbxref=GenBank:WP_124724567.1;Name=WP_124724567.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013378.7;locus_tag=FJM01_RS02730;product=YigZ family protein;protein_id=WP_124724567.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 29448 31238 . - . ID=gene-FJM01_RS02735;Name=FJM01_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02735;old_locus_tag=FJM01_02735 NZ_VFSY01000027.1 GeneMarkS-2+ CDS 29448 31238 . - 0 ID=cds-WP_140701285.1;Parent=gene-FJM01_RS02735;Dbxref=GenBank:WP_140701285.1;Name=WP_140701285.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02735;product=hypothetical protein;protein_id=WP_140701285.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 31333 32994 . - . ID=gene-FJM01_RS02740;Name=FJM01_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02740;old_locus_tag=FJM01_02740 NZ_VFSY01000027.1 GeneMarkS-2+ CDS 31333 32994 . - 0 ID=cds-WP_140701287.1;Parent=gene-FJM01_RS02740;Dbxref=GenBank:WP_140701287.1;Name=WP_140701287.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02740;product=hypothetical protein;protein_id=WP_140701287.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 33110 33904 . - . ID=gene-FJM01_RS02745;Name=FJM01_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02745;old_locus_tag=FJM01_02745 NZ_VFSY01000027.1 GeneMarkS-2+ CDS 33110 33904 . - 0 ID=cds-WP_140701289.1;Parent=gene-FJM01_RS02745;Dbxref=GenBank:WP_140701289.1;Name=WP_140701289.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02745;product=SemiSWEET family transporter;protein_id=WP_140701289.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 33999 34074 . - . ID=gene-FJM01_RS02750;Name=FJM01_RS02750;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS02750;old_locus_tag=FJM01_02750 NZ_VFSY01000027.1 tRNAscan-SE tRNA 33999 34074 . - . ID=rna-FJM01_RS02750;Parent=gene-FJM01_RS02750;anticodon=(pos:complement(34039..34041));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02750;product=tRNA-Phe NZ_VFSY01000027.1 tRNAscan-SE exon 33999 34074 . - . ID=exon-FJM01_RS02750-1;Parent=rna-FJM01_RS02750;anticodon=(pos:complement(34039..34041));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02750;product=tRNA-Phe NZ_VFSY01000027.1 RefSeq gene 34079 34155 . - . ID=gene-FJM01_RS02755;Name=FJM01_RS02755;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS02755;old_locus_tag=FJM01_02755 NZ_VFSY01000027.1 tRNAscan-SE tRNA 34079 34155 . - . ID=rna-FJM01_RS02755;Parent=gene-FJM01_RS02755;anticodon=(pos:complement(34119..34121));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02755;product=tRNA-Asp NZ_VFSY01000027.1 tRNAscan-SE exon 34079 34155 . - . ID=exon-FJM01_RS02755-1;Parent=rna-FJM01_RS02755;anticodon=(pos:complement(34119..34121));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02755;product=tRNA-Asp NZ_VFSY01000027.1 RefSeq gene 34157 34233 . - . ID=gene-FJM01_RS02760;Name=FJM01_RS02760;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS02760;old_locus_tag=FJM01_02760 NZ_VFSY01000027.1 tRNAscan-SE tRNA 34157 34233 . - . ID=rna-FJM01_RS02760;Parent=gene-FJM01_RS02760;anticodon=(pos:complement(34197..34199));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02760;product=tRNA-Met NZ_VFSY01000027.1 tRNAscan-SE exon 34157 34233 . - . ID=exon-FJM01_RS02760-1;Parent=rna-FJM01_RS02760;anticodon=(pos:complement(34197..34199));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02760;product=tRNA-Met NZ_VFSY01000027.1 RefSeq gene 34240 34330 . - . ID=gene-FJM01_RS02765;Name=FJM01_RS02765;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS02765;old_locus_tag=FJM01_02765 NZ_VFSY01000027.1 tRNAscan-SE tRNA 34240 34330 . - . ID=rna-FJM01_RS02765;Parent=gene-FJM01_RS02765;anticodon=(pos:complement(34294..34296));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02765;product=tRNA-Ser NZ_VFSY01000027.1 tRNAscan-SE exon 34240 34330 . - . ID=exon-FJM01_RS02765-1;Parent=rna-FJM01_RS02765;anticodon=(pos:complement(34294..34296));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02765;product=tRNA-Ser NZ_VFSY01000027.1 RefSeq gene 34333 34408 . - . ID=gene-FJM01_RS02770;Name=FJM01_RS02770;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS02770;old_locus_tag=FJM01_02770 NZ_VFSY01000027.1 tRNAscan-SE tRNA 34333 34408 . - . ID=rna-FJM01_RS02770;Parent=gene-FJM01_RS02770;anticodon=(pos:complement(34373..34375));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02770;product=tRNA-Ile NZ_VFSY01000027.1 tRNAscan-SE exon 34333 34408 . - . ID=exon-FJM01_RS02770-1;Parent=rna-FJM01_RS02770;anticodon=(pos:complement(34373..34375));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02770;product=tRNA-Ile NZ_VFSY01000027.1 RefSeq gene 34434 34510 . - . ID=gene-FJM01_RS02775;Name=FJM01_RS02775;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS02775;old_locus_tag=FJM01_02775 NZ_VFSY01000027.1 tRNAscan-SE tRNA 34434 34510 . - . ID=rna-FJM01_RS02775;Parent=gene-FJM01_RS02775;anticodon=(pos:complement(34474..34476));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02775;product=tRNA-Met NZ_VFSY01000027.1 tRNAscan-SE exon 34434 34510 . - . ID=exon-FJM01_RS02775-1;Parent=rna-FJM01_RS02775;anticodon=(pos:complement(34474..34476));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02775;product=tRNA-Met NZ_VFSY01000027.1 RefSeq gene 34515 34591 . - . ID=gene-FJM01_RS02780;Name=FJM01_RS02780;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS02780;old_locus_tag=FJM01_02780 NZ_VFSY01000027.1 tRNAscan-SE tRNA 34515 34591 . - . ID=rna-FJM01_RS02780;Parent=gene-FJM01_RS02780;anticodon=(pos:complement(34555..34557));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02780;product=tRNA-Ala NZ_VFSY01000027.1 tRNAscan-SE exon 34515 34591 . - . ID=exon-FJM01_RS02780-1;Parent=rna-FJM01_RS02780;anticodon=(pos:complement(34555..34557));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02780;product=tRNA-Ala NZ_VFSY01000027.1 RefSeq gene 34598 34674 . - . ID=gene-FJM01_RS02785;Name=FJM01_RS02785;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS02785;old_locus_tag=FJM01_02785 NZ_VFSY01000027.1 tRNAscan-SE tRNA 34598 34674 . - . ID=rna-FJM01_RS02785;Parent=gene-FJM01_RS02785;anticodon=(pos:complement(34638..34640));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02785;product=tRNA-Pro NZ_VFSY01000027.1 tRNAscan-SE exon 34598 34674 . - . ID=exon-FJM01_RS02785-1;Parent=rna-FJM01_RS02785;anticodon=(pos:complement(34638..34640));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS02785;product=tRNA-Pro NZ_VFSY01000027.1 RefSeq gene 34742 36013 . - . ID=gene-FJM01_RS02790;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=FJM01_RS02790;old_locus_tag=FJM01_02790 NZ_VFSY01000027.1 Protein Homology CDS 34742 36013 . - 0 ID=cds-WP_124724572.1;Parent=gene-FJM01_RS02790;Dbxref=GenBank:WP_124724572.1;Name=WP_124724572.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054644.1;locus_tag=FJM01_RS02790;product=GTPase ObgE;protein_id=WP_124724572.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 36071 37624 . - . ID=gene-FJM01_RS02795;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=FJM01_RS02795;old_locus_tag=FJM01_02795 NZ_VFSY01000027.1 Protein Homology CDS 36071 37624 . - 0 ID=cds-WP_140701291.1;Parent=gene-FJM01_RS02795;Dbxref=GenBank:WP_140701291.1;Name=WP_140701291.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054771.1;locus_tag=FJM01_RS02795;product=methionine--tRNA ligase;protein_id=WP_140701291.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 37624 38406 . - . ID=gene-FJM01_RS02800;Name=FJM01_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02800;old_locus_tag=FJM01_02800 NZ_VFSY01000027.1 Protein Homology CDS 37624 38406 . - 0 ID=cds-WP_140701293.1;Parent=gene-FJM01_RS02800;Dbxref=GenBank:WP_140701293.1;Name=WP_140701293.1;Ontology_term=GO:0032259,GO:0008170,GO:0008757,GO:0016430,GO:1904047;gbkey=CDS;go_function=N-methyltransferase activity|0008170||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054164.1;locus_tag=FJM01_RS02800;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WP_140701293.1;transl_table=4 NZ_VFSY01000027.1 RefSeq gene 38530 39078 . - . ID=gene-FJM01_RS02805;Name=FJM01_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02805;old_locus_tag=FJM01_02805 NZ_VFSY01000027.1 GeneMarkS-2+ CDS 38530 39078 . - 0 ID=cds-WP_140701295.1;Parent=gene-FJM01_RS02805;Dbxref=GenBank:WP_140701295.1;Name=WP_140701295.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02805;product=hypothetical protein;protein_id=WP_140701295.1;transl_table=4 ##sequence-region NZ_VFSY01000011.1 1 1085 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000011.1 RefSeq region 1 1085 . + . ID=NZ_VFSY01000011.1:1..1085;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000011.1 RefSeq pseudogene 453 1085 . + . ID=gene-FJM01_RS00355;Name=FJM01_RS00355;end_range=1085,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=FJM01_RS00355;old_locus_tag=FJM01_00355;partial=true;pseudo=true NZ_VFSY01000011.1 GeneMarkS-2+ CDS 453 1085 . + 0 ID=cds-FJM01_RS00355;Parent=gene-FJM01_RS00355;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1085,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00355;partial=true;product=collagen-like protein;pseudo=true;transl_table=4 ##sequence-region NZ_VFSY01000029.1 1 74495 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000029.1 RefSeq region 1 74495 . + . ID=NZ_VFSY01000029.1:1..74495;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000029.1 RefSeq gene 1 89 . - . ID=gene-FJM01_RS02850;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=FJM01_RS02850;old_locus_tag=FJM01_02850;partial=true;start_range=.,1 NZ_VFSY01000029.1 cmsearch rRNA 1 89 . - . ID=rna-FJM01_RS02850;Parent=gene-FJM01_RS02850;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=FJM01_RS02850;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_VFSY01000029.1 cmsearch exon 1 89 . - . ID=exon-FJM01_RS02850-1;Parent=rna-FJM01_RS02850;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=FJM01_RS02850;partial=true;product=5S ribosomal RNA;start_range=.,1 NZ_VFSY01000029.1 RefSeq gene 128 829 . - . ID=gene-FJM01_RS02855;Name=FJM01_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02855;old_locus_tag=FJM01_02855 NZ_VFSY01000029.1 Protein Homology CDS 128 829 . - 0 ID=cds-WP_140701305.1;Parent=gene-FJM01_RS02855;Dbxref=GenBank:WP_140701305.1;Name=WP_140701305.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: protein motif:HMM:NF015448.7;locus_tag=FJM01_RS02855;product=B3/B4 domain-containing protein;protein_id=WP_140701305.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 886 1245 . - . ID=gene-FJM01_RS02860;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=FJM01_RS02860;old_locus_tag=FJM01_02860 NZ_VFSY01000029.1 Protein Homology CDS 886 1245 . - 0 ID=cds-WP_124724582.1;Parent=gene-FJM01_RS02860;Dbxref=GenBank:WP_124724582.1;Name=WP_124724582.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014035253.1;locus_tag=FJM01_RS02860;product=50S ribosomal protein L20;protein_id=WP_124724582.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 1274 1453 . - . ID=gene-FJM01_RS02865;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=FJM01_RS02865;old_locus_tag=FJM01_02865 NZ_VFSY01000029.1 Protein Homology CDS 1274 1453 . - 0 ID=cds-WP_416371558.1;Parent=gene-FJM01_RS02865;Dbxref=GenBank:WP_416371558.1;Name=WP_416371558.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006886302.1;locus_tag=FJM01_RS02865;product=50S ribosomal protein L35;protein_id=WP_416371558.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 1473 2123 . - . ID=gene-FJM01_RS02870;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=FJM01_RS02870;old_locus_tag=FJM01_02870 NZ_VFSY01000029.1 Protein Homology CDS 1473 2123 . - 0 ID=cds-WP_124724584.1;Parent=gene-FJM01_RS02870;Dbxref=GenBank:WP_124724584.1;Name=WP_124724584.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054563.1;locus_tag=FJM01_RS02870;product=translation initiation factor IF-3;protein_id=WP_124724584.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 2223 3308 . - . ID=gene-FJM01_RS02875;Name=FJM01_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02875;old_locus_tag=FJM01_02875 NZ_VFSY01000029.1 Protein Homology CDS 2223 3308 . - 0 ID=cds-WP_140701307.1;Parent=gene-FJM01_RS02875;Dbxref=GenBank:WP_140701307.1;Name=WP_140701307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054411.1;locus_tag=FJM01_RS02875;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_140701307.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 3299 4210 . - . ID=gene-FJM01_RS03500;Name=FJM01_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03500;old_locus_tag=FJM01_02880 NZ_VFSY01000029.1 Protein Homology CDS 3299 4210 . - 0 ID=cds-WP_416371559.1;Parent=gene-FJM01_RS03500;Dbxref=GenBank:WP_416371559.1;Name=WP_416371559.1;Ontology_term=GO:0006281,GO:0003684;gbkey=CDS;go_function=damaged DNA binding|0003684||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: protein motif:HMM:NF023227.7;locus_tag=FJM01_RS03500;product=DinB/UmuC family translesion DNA polymerase;protein_id=WP_416371559.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 4125 4565 . - . ID=gene-FJM01_RS03505;Name=FJM01_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03505 NZ_VFSY01000029.1 Protein Homology CDS 4125 4565 . - 0 ID=cds-WP_261368982.1;Parent=gene-FJM01_RS03505;Dbxref=GenBank:WP_261368982.1;Name=WP_261368982.1;Ontology_term=GO:0006281;gbkey=CDS;go_process=DNA repair|0006281||IEA;inference=COORDINATES: protein motif:HMM:NF013015.7;locus_tag=FJM01_RS03505;product=Y-family DNA polymerase;protein_id=WP_261368982.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 4558 5004 . - . ID=gene-FJM01_RS02885;Name=FJM01_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02885;old_locus_tag=FJM01_02885 NZ_VFSY01000029.1 Protein Homology CDS 4558 5004 . - 0 ID=cds-WP_261368983.1;Parent=gene-FJM01_RS02885;Dbxref=GenBank:WP_261368983.1;Name=WP_261368983.1;Ontology_term=GO:0016226,GO:0005506,GO:0051536;gbkey=CDS;go_function=iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: protein motif:HMM:NF013738.7;locus_tag=FJM01_RS02885;product=iron-sulfur cluster assembly scaffold protein;protein_id=WP_261368983.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 4982 6154 . - . ID=gene-FJM01_RS02890;Name=FJM01_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02890;old_locus_tag=FJM01_02890 NZ_VFSY01000029.1 Protein Homology CDS 4982 6154 . - 0 ID=cds-WP_140701309.1;Parent=gene-FJM01_RS02890;Dbxref=GenBank:WP_140701309.1;Name=WP_140701309.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: protein motif:HMM:NF012488.7;locus_tag=FJM01_RS02890;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_140701309.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 6156 6386 . - . ID=gene-FJM01_RS03535;Name=FJM01_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03535 NZ_VFSY01000029.1 Protein Homology CDS 6156 6386 . - 0 ID=cds-WP_315850235.1;Parent=gene-FJM01_RS03535;Dbxref=GenBank:WP_315850235.1;Name=WP_315850235.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: protein motif:HMM:NF013856.7;locus_tag=FJM01_RS03535;product=SAM-dependent methyltransferase;protein_id=WP_315850235.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 6401 6886 . - . ID=gene-FJM01_RS02895;Name=FJM01_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02895;old_locus_tag=FJM01_02895 NZ_VFSY01000029.1 Protein Homology CDS 6401 6886 . - 0 ID=cds-WP_315850236.1;Parent=gene-FJM01_RS02895;Dbxref=GenBank:WP_315850236.1;Name=WP_315850236.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: protein motif:HMM:NF013856.7;locus_tag=FJM01_RS02895;product=SAM-dependent methyltransferase;protein_id=WP_315850236.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 6888 7319 . - . ID=gene-FJM01_RS02900;Name=FJM01_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02900;old_locus_tag=FJM01_02900 NZ_VFSY01000029.1 Protein Homology CDS 6888 7319 . - 0 ID=cds-WP_140701311.1;Parent=gene-FJM01_RS02900;Dbxref=GenBank:WP_140701311.1;Name=WP_140701311.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF013216.7;locus_tag=FJM01_RS02900;product=transcription antitermination factor NusB;protein_id=WP_140701311.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 7322 8125 . - . ID=gene-FJM01_RS02905;Name=FJM01_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02905;old_locus_tag=FJM01_02905 NZ_VFSY01000029.1 Protein Homology CDS 7322 8125 . - 0 ID=cds-WP_140701313.1;Parent=gene-FJM01_RS02905;Dbxref=GenBank:WP_140701313.1;Name=WP_140701313.1;Ontology_term=GO:0008152,GO:0042578;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054757.1;locus_tag=FJM01_RS02905;product=TIGR00282 family metallophosphoesterase;protein_id=WP_140701313.1;transl_table=4 NZ_VFSY01000029.1 RefSeq pseudogene 8200 9211 . - . ID=gene-FJM01_RS02910;Name=recA;gbkey=Gene;gene=recA;gene_biotype=pseudogene;locus_tag=FJM01_RS02910;old_locus_tag=FJM01_02910;pseudo=true NZ_VFSY01000029.1 Protein Homology CDS 8200 9211 . - 0 ID=cds-FJM01_RS02910;Parent=gene-FJM01_RS02910;Note=frameshifted;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004426810.1;locus_tag=FJM01_RS02910;product=recombinase RecA;pseudo=true;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 9283 11454 . - . ID=gene-FJM01_RS02915;Name=FJM01_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02915;old_locus_tag=FJM01_02915 NZ_VFSY01000029.1 Protein Homology CDS 9283 11454 . - 0 ID=cds-WP_140701315.1;Parent=gene-FJM01_RS02915;Dbxref=GenBank:WP_140701315.1;Name=WP_140701315.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF001882.0;locus_tag=FJM01_RS02915;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_140701315.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 11463 12206 . - . ID=gene-FJM01_RS02920;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=FJM01_RS02920;old_locus_tag=FJM01_02920 NZ_VFSY01000029.1 Protein Homology CDS 11463 12206 . - 0 ID=cds-WP_334199166.1;Parent=gene-FJM01_RS02920;Dbxref=GenBank:WP_334199166.1;Name=WP_334199166.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: protein motif:HMM:TIGR00468.1;locus_tag=FJM01_RS02920;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_334199166.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 12247 12405 . - . ID=gene-FJM01_RS03635;Name=FJM01_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03635 NZ_VFSY01000029.1 GeneMarkS-2+ CDS 12247 12405 . - 0 ID=cds-WP_334199163.1;Parent=gene-FJM01_RS03635;Dbxref=GenBank:WP_334199163.1;Name=WP_334199163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03635;product=hypothetical protein;protein_id=WP_334199163.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 12410 13615 . - . ID=gene-FJM01_RS02925;Name=FJM01_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02925;old_locus_tag=FJM01_02925 NZ_VFSY01000029.1 Protein Homology CDS 12410 13615 . - 0 ID=cds-WP_124724593.1;Parent=gene-FJM01_RS02925;Dbxref=GenBank:WP_124724593.1;Name=WP_124724593.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054582.1;locus_tag=FJM01_RS02925;product=replication-associated recombination protein A;protein_id=WP_124724593.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 13667 14065 . - . ID=gene-FJM01_RS02930;Name=FJM01_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02930;old_locus_tag=FJM01_02930 NZ_VFSY01000029.1 GeneMarkS-2+ CDS 13667 14065 . - 0 ID=cds-WP_140701317.1;Parent=gene-FJM01_RS02930;Dbxref=GenBank:WP_140701317.1;Name=WP_140701317.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02930;product=hypothetical protein;protein_id=WP_140701317.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 14132 14440 . - . ID=gene-FJM01_RS02935;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=FJM01_RS02935;old_locus_tag=FJM01_02935 NZ_VFSY01000029.1 Protein Homology CDS 14132 14440 . - 0 ID=cds-WP_124724595.1;Parent=gene-FJM01_RS02935;Dbxref=GenBank:WP_124724595.1;Name=WP_124724595.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:TIGR00165.1;locus_tag=FJM01_RS02935;product=30S ribosomal protein S18;protein_id=WP_124724595.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 14463 14948 . - . ID=gene-FJM01_RS02940;Name=FJM01_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02940;old_locus_tag=FJM01_02940 NZ_VFSY01000029.1 Protein Homology CDS 14463 14948 . - 0 ID=cds-WP_124724596.1;Parent=gene-FJM01_RS02940;Dbxref=GenBank:WP_124724596.1;Name=WP_124724596.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:TIGR00621.2;locus_tag=FJM01_RS02940;product=single-stranded DNA-binding protein;protein_id=WP_124724596.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 14969 15397 . - . ID=gene-FJM01_RS02945;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=FJM01_RS02945;old_locus_tag=FJM01_02945 NZ_VFSY01000029.1 Protein Homology CDS 14969 15397 . - 0 ID=cds-WP_140701319.1;Parent=gene-FJM01_RS02945;Dbxref=GenBank:WP_140701319.1;Name=WP_140701319.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:TIGR00166.1;locus_tag=FJM01_RS02945;product=30S ribosomal protein S6;protein_id=WP_140701319.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 15544 16845 . - . ID=gene-FJM01_RS02950;Name=FJM01_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02950;old_locus_tag=FJM01_02950 NZ_VFSY01000029.1 Protein Homology CDS 15544 16845 . - 0 ID=cds-WP_140701321.1;Parent=gene-FJM01_RS02950;Dbxref=GenBank:WP_140701321.1;Name=WP_140701321.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054795.1;locus_tag=FJM01_RS02950;product=hemolysin family protein;protein_id=WP_140701321.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 16922 17482 . + . ID=gene-FJM01_RS02955;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=FJM01_RS02955;old_locus_tag=FJM01_02955 NZ_VFSY01000029.1 Protein Homology CDS 16922 17482 . + 0 ID=cds-WP_124724599.1;Parent=gene-FJM01_RS02955;Dbxref=GenBank:WP_124724599.1;Name=WP_124724599.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054300.1;locus_tag=FJM01_RS02955;product=peptide deformylase;protein_id=WP_124724599.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 17526 18536 . - . ID=gene-FJM01_RS02960;Name=FJM01_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02960;old_locus_tag=FJM01_02960 NZ_VFSY01000029.1 GeneMarkS-2+ CDS 17526 18536 . - 0 ID=cds-WP_124724600.1;Parent=gene-FJM01_RS02960;Dbxref=GenBank:WP_124724600.1;Name=WP_124724600.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02960;product=hypothetical protein;protein_id=WP_124724600.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 18536 18733 . - . ID=gene-FJM01_RS02965;Name=FJM01_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02965;old_locus_tag=FJM01_02965 NZ_VFSY01000029.1 GeneMarkS-2+ CDS 18536 18733 . - 0 ID=cds-WP_140701323.1;Parent=gene-FJM01_RS02965;Dbxref=GenBank:WP_140701323.1;Name=WP_140701323.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02965;product=hypothetical protein;protein_id=WP_140701323.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 18714 21887 . - . ID=gene-FJM01_RS02970;Name=FJM01_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02970;old_locus_tag=FJM01_02970 NZ_VFSY01000029.1 Protein Homology CDS 18714 21887 . - 0 ID=cds-WP_140701325.1;Parent=gene-FJM01_RS02970;Dbxref=GenBank:WP_140701325.1;Name=WP_140701325.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: protein motif:HMM:NF024487.7;locus_tag=FJM01_RS02970;product=AAA domain-containing protein;protein_id=WP_140701325.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 21919 22419 . - . ID=gene-FJM01_RS02975;Name=FJM01_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02975;old_locus_tag=FJM01_02975 NZ_VFSY01000029.1 GeneMarkS-2+ CDS 21919 22419 . - 0 ID=cds-WP_140701327.1;Parent=gene-FJM01_RS02975;Dbxref=GenBank:WP_140701327.1;Name=WP_140701327.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02975;product=hypothetical protein;protein_id=WP_140701327.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 22423 22785 . - . ID=gene-FJM01_RS02980;Name=FJM01_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02980;old_locus_tag=FJM01_02980 NZ_VFSY01000029.1 GeneMarkS-2+ CDS 22423 22785 . - 0 ID=cds-WP_124724603.1;Parent=gene-FJM01_RS02980;Dbxref=GenBank:WP_124724603.1;Name=WP_124724603.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02980;product=PTS glucose transporter subunit IIB;protein_id=WP_124724603.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 23011 23637 . + . ID=gene-FJM01_RS03640;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=FJM01_RS03640 NZ_VFSY01000029.1 Protein Homology CDS 23011 23637 . + 0 ID=cds-WP_334199164.1;Parent=gene-FJM01_RS03640;Dbxref=GenBank:WP_334199164.1;Name=WP_334199164.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: protein motif:HMM:TIGR00233.1;locus_tag=FJM01_RS03640;product=tryptophan--tRNA ligase;protein_id=WP_334199164.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 23618 24031 . + . ID=gene-FJM01_RS03645;Name=FJM01_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03645 NZ_VFSY01000029.1 Protein Homology CDS 23618 24031 . + 0 ID=cds-WP_334199165.1;Parent=gene-FJM01_RS03645;Dbxref=GenBank:WP_334199165.1;Name=WP_334199165.1;Ontology_term=GO:0006436,GO:0004830,GO:0005524;gbkey=CDS;go_function=tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: protein motif:HMM:NF012788.7;locus_tag=FJM01_RS03645;product=tryptophan--tRNA ligase;protein_id=WP_334199165.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 24010 25749 . + . ID=gene-FJM01_RS02990;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=FJM01_RS02990;old_locus_tag=FJM01_02990 NZ_VFSY01000029.1 Protein Homology CDS 24010 25749 . + 0 ID=cds-WP_124724605.1;Parent=gene-FJM01_RS02990;Dbxref=GenBank:WP_124724605.1;Name=WP_124724605.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054474.1;locus_tag=FJM01_RS02990;product=threonine--tRNA ligase;protein_id=WP_124724605.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 25802 26578 . - . ID=gene-FJM01_RS02995;Name=FJM01_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS02995;old_locus_tag=FJM01_02995 NZ_VFSY01000029.1 GeneMarkS-2+ CDS 25802 26578 . - 0 ID=cds-WP_140701329.1;Parent=gene-FJM01_RS02995;Dbxref=GenBank:WP_140701329.1;Name=WP_140701329.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS02995;product=hypothetical protein;protein_id=WP_140701329.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 26720 27397 . - . ID=gene-FJM01_RS03000;Name=FJM01_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03000;old_locus_tag=FJM01_03000 NZ_VFSY01000029.1 GeneMarkS-2+ CDS 26720 27397 . - 0 ID=cds-WP_124724607.1;Parent=gene-FJM01_RS03000;Dbxref=GenBank:WP_124724607.1;Name=WP_124724607.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03000;product=NERD domain-containing protein;protein_id=WP_124724607.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 27410 27955 . - . ID=gene-FJM01_RS03320;Name=FJM01_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03320;old_locus_tag=FJM01_03005 NZ_VFSY01000029.1 Protein Homology CDS 27410 27955 . - 0 ID=cds-WP_140701331.1;Parent=gene-FJM01_RS03320;Dbxref=GenBank:WP_140701331.1;Name=WP_140701331.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013980.7;locus_tag=FJM01_RS03320;product=YgjP-like metallopeptidase domain-containing protein;protein_id=WP_140701331.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 27940 28140 . - . ID=gene-FJM01_RS03010;Name=FJM01_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03010;old_locus_tag=FJM01_03010 NZ_VFSY01000029.1 GeneMarkS-2+ CDS 27940 28140 . - 0 ID=cds-WP_140701333.1;Parent=gene-FJM01_RS03010;Dbxref=GenBank:WP_140701333.1;Name=WP_140701333.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03010;product=hypothetical protein;protein_id=WP_140701333.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 28278 28541 . + . ID=gene-FJM01_RS03015;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=FJM01_RS03015;old_locus_tag=FJM01_03015 NZ_VFSY01000029.1 Protein Homology CDS 28278 28541 . + 0 ID=cds-WP_124724609.1;Parent=gene-FJM01_RS03015;Dbxref=GenBank:WP_124724609.1;Name=WP_124724609.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:TIGR00029.2;locus_tag=FJM01_RS03015;product=30S ribosomal protein S20;protein_id=WP_124724609.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 28614 29315 . - . ID=gene-FJM01_RS03020;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=FJM01_RS03020;old_locus_tag=FJM01_03020 NZ_VFSY01000029.1 Protein Homology CDS 28614 29315 . - 0 ID=cds-WP_140701335.1;Parent=gene-FJM01_RS03020;Dbxref=GenBank:WP_140701335.1;Name=WP_140701335.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054270.1;locus_tag=FJM01_RS03020;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_140701335.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 29308 30192 . - . ID=gene-FJM01_RS03025;Name=FJM01_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03025;old_locus_tag=FJM01_03025 NZ_VFSY01000029.1 Protein Homology CDS 29308 30192 . - 0 ID=cds-WP_140701337.1;Parent=gene-FJM01_RS03025;Dbxref=GenBank:WP_140701337.1;Name=WP_140701337.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024575.7;locus_tag=FJM01_RS03025;product=DNA polymerase III;protein_id=WP_140701337.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 30192 30836 . - . ID=gene-FJM01_RS03030;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=FJM01_RS03030;old_locus_tag=FJM01_03030 NZ_VFSY01000029.1 Protein Homology CDS 30192 30836 . - 0 ID=cds-WP_124724614.1;Parent=gene-FJM01_RS03030;Dbxref=GenBank:WP_124724614.1;Name=WP_124724614.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: protein motif:HMM:TIGR00041.1;locus_tag=FJM01_RS03030;product=dTMP kinase;protein_id=WP_124724614.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 30855 31442 . - . ID=gene-FJM01_RS03035;Name=FJM01_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03035;old_locus_tag=FJM01_03035 NZ_VFSY01000029.1 Protein Homology CDS 30855 31442 . - 0 ID=cds-WP_124724615.1;Parent=gene-FJM01_RS03035;Dbxref=GenBank:WP_124724615.1;Name=WP_124724615.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF044419.4;locus_tag=FJM01_RS03035;product=toprim domain-containing protein;protein_id=WP_124724615.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 31442 31735 . - . ID=gene-FJM01_RS03040;Name=FJM01_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03040;old_locus_tag=FJM01_03040 NZ_VFSY01000029.1 Protein Homology CDS 31442 31735 . - 0 ID=cds-WP_124724616.1;Parent=gene-FJM01_RS03040;Dbxref=GenBank:WP_124724616.1;Name=WP_124724616.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:TIGR00103.1;locus_tag=FJM01_RS03040;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_124724616.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 31753 33849 . - . ID=gene-FJM01_RS03045;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=FJM01_RS03045;old_locus_tag=FJM01_03045 NZ_VFSY01000029.1 Protein Homology CDS 31753 33849 . - 0 ID=cds-WP_140701339.1;Parent=gene-FJM01_RS03045;Dbxref=GenBank:WP_140701339.1;Name=WP_140701339.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF004046.0;locus_tag=FJM01_RS03045;product=DNA polymerase III subunit gamma/tau;protein_id=WP_140701339.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 33927 34439 . + . ID=gene-FJM01_RS03050;Name=FJM01_RS03050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03050;old_locus_tag=FJM01_03050 NZ_VFSY01000029.1 GeneMarkS-2+ CDS 33927 34439 . + 0 ID=cds-WP_140701341.1;Parent=gene-FJM01_RS03050;Dbxref=GenBank:WP_140701341.1;Name=WP_140701341.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03050;product=hypothetical protein;protein_id=WP_140701341.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 34476 34856 . + . ID=gene-FJM01_RS03055;Name=FJM01_RS03055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03055;old_locus_tag=FJM01_03055 NZ_VFSY01000029.1 Protein Homology CDS 34476 34856 . + 0 ID=cds-WP_261368984.1;Parent=gene-FJM01_RS03055;Dbxref=GenBank:WP_261368984.1;Name=WP_261368984.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012514.7;locus_tag=FJM01_RS03055;product=bis(5'-nucleosyl)-tetraphosphatase;protein_id=WP_261368984.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 35157 36680 . + . ID=gene-FJM01_RS03060;Name=FJM01_RS03060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03060;old_locus_tag=FJM01_03060 NZ_VFSY01000029.1 Protein Homology CDS 35157 36680 . + 0 ID=cds-WP_140701343.1;Parent=gene-FJM01_RS03060;Dbxref=GenBank:WP_140701343.1;Name=WP_140701343.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF015347.7;locus_tag=FJM01_RS03060;product=BspA family leucine-rich repeat surface protein;protein_id=WP_140701343.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 36734 39346 . - . ID=gene-FJM01_RS03065;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=FJM01_RS03065;old_locus_tag=FJM01_03065 NZ_VFSY01000029.1 Protein Homology CDS 36734 39346 . - 0 ID=cds-WP_140701345.1;Parent=gene-FJM01_RS03065;Dbxref=GenBank:WP_140701345.1;Name=WP_140701345.1;Ontology_term=GO:0043952,GO:0005524,GO:0015450,GO:0016887,GO:0009898;gbkey=CDS;gene=secA;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,protein-transporting ATPase activity|0015450||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054770.1;locus_tag=FJM01_RS03065;product=preprotein translocase subunit SecA;protein_id=WP_140701345.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 39410 40816 . - . ID=gene-FJM01_RS03070;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=FJM01_RS03070;old_locus_tag=FJM01_03070 NZ_VFSY01000029.1 Protein Homology CDS 39410 40816 . - 0 ID=cds-WP_124724622.1;Parent=gene-FJM01_RS03070;Dbxref=GenBank:WP_124724622.1;Name=WP_124724622.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: protein motif:HMM:TIGR00115.1;locus_tag=FJM01_RS03070;product=trigger factor;protein_id=WP_124724622.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 40918 41619 . - . ID=gene-FJM01_RS03075;Name=FJM01_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03075;old_locus_tag=FJM01_03075 NZ_VFSY01000029.1 GeneMarkS-2+ CDS 40918 41619 . - 0 ID=cds-WP_124724623.1;Parent=gene-FJM01_RS03075;Dbxref=GenBank:WP_124724623.1;Name=WP_124724623.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03075;product=hypothetical protein;protein_id=WP_124724623.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 41744 42442 . + . ID=gene-FJM01_RS03705;Name=FJM01_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03705 NZ_VFSY01000029.1 Protein Homology CDS 41744 42442 . + 0 ID=cds-WP_465101074.1;Parent=gene-FJM01_RS03705;Dbxref=GenBank:WP_465101074.1;Name=WP_465101074.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015885.7;locus_tag=FJM01_RS03705;product=phosphopyruvate hydratase family protein;protein_id=WP_465101074.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 42339 43115 . + . ID=gene-FJM01_RS03710;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=FJM01_RS03710 NZ_VFSY01000029.1 Protein Homology CDS 42339 43115 . + 0 ID=cds-WP_465101075.1;Parent=gene-FJM01_RS03710;Dbxref=GenBank:WP_465101075.1;Name=WP_465101075.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: protein motif:HMM:NF012341.7;locus_tag=FJM01_RS03710;product=phosphopyruvate hydratase;protein_id=WP_465101075.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 43234 43926 . - . ID=gene-FJM01_RS03085;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=FJM01_RS03085;old_locus_tag=FJM01_03085 NZ_VFSY01000029.1 Protein Homology CDS 43234 43926 . - 0 ID=cds-WP_124724626.1;Parent=gene-FJM01_RS03085;Dbxref=GenBank:WP_124724626.1;Name=WP_124724626.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054464.1;locus_tag=FJM01_RS03085;product=50S ribosomal protein L1;protein_id=WP_124724626.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 43926 44426 . - . ID=gene-FJM01_RS03090;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=FJM01_RS03090;old_locus_tag=FJM01_03090 NZ_VFSY01000029.1 Protein Homology CDS 43926 44426 . - 0 ID=cds-WP_465101076.1;Parent=gene-FJM01_RS03090;Dbxref=GenBank:WP_465101076.1;Name=WP_465101076.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447424.1;locus_tag=FJM01_RS03090;product=50S ribosomal protein L11;protein_id=WP_465101076.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 44545 45144 . - . ID=gene-FJM01_RS03095;Name=FJM01_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03095;old_locus_tag=FJM01_03095 NZ_VFSY01000029.1 Protein Homology CDS 44545 45144 . - 0 ID=cds-WP_140701347.1;Parent=gene-FJM01_RS03095;Dbxref=GenBank:WP_140701347.1;Name=WP_140701347.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF002370.0;locus_tag=FJM01_RS03095;product=FMN-dependent NADH-azoreductase;protein_id=WP_140701347.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 45235 45489 . - . ID=gene-FJM01_RS03100;Name=FJM01_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03100;old_locus_tag=FJM01_03100 NZ_VFSY01000029.1 GeneMarkS-2+ CDS 45235 45489 . - 0 ID=cds-WP_140701349.1;Parent=gene-FJM01_RS03100;Dbxref=GenBank:WP_140701349.1;Name=WP_140701349.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03100;product=hypothetical protein;protein_id=WP_140701349.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 45557 48856 . - . ID=gene-FJM01_RS03105;Name=FJM01_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03105;old_locus_tag=FJM01_03105 NZ_VFSY01000029.1 GeneMarkS-2+ CDS 45557 48856 . - 0 ID=cds-WP_140701351.1;Parent=gene-FJM01_RS03105;Dbxref=GenBank:WP_140701351.1;Name=WP_140701351.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03105;product=hypothetical protein;protein_id=WP_140701351.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 49258 49848 . - . ID=gene-FJM01_RS03325;Name=FJM01_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03325 NZ_VFSY01000029.1 Protein Homology CDS 49258 49848 . - 0 ID=cds-WP_222400916.1;Parent=gene-FJM01_RS03325;Dbxref=GenBank:WP_222400916.1;Name=WP_222400916.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023433.7;locus_tag=FJM01_RS03325;product=type I restriction endonuclease subunit R%2C EcoR124 family;protein_id=WP_222400916.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 49871 52303 . - . ID=gene-FJM01_RS03110;Name=FJM01_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03110;old_locus_tag=FJM01_03110 NZ_VFSY01000029.1 Protein Homology CDS 49871 52303 . - 0 ID=cds-WP_222400914.1;Parent=gene-FJM01_RS03110;Dbxref=GenBank:WP_222400914.1;Name=WP_222400914.1;Ontology_term=GO:0009307,GO:0003677,GO:0004386,GO:0005524,GO:0009035,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,type I site-specific deoxyribonuclease activity|0009035||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: protein motif:HMM:TIGR00348.1;locus_tag=FJM01_RS03110;product=type I restriction endonuclease subunit R;protein_id=WP_222400914.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 52390 54237 . - . ID=gene-FJM01_RS03280;Name=FJM01_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03280 NZ_VFSY01000029.1 Protein Homology CDS 52390 54237 . - 0 ID=cds-WP_186390767.1;Parent=gene-FJM01_RS03280;Dbxref=GenBank:WP_186390767.1;Name=WP_186390767.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.7;locus_tag=FJM01_RS03280;product=restriction endonuclease subunit S;protein_id=WP_186390767.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 54224 55567 . - . ID=gene-FJM01_RS03120;Name=FJM01_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03120;old_locus_tag=FJM01_03120 NZ_VFSY01000029.1 Protein Homology CDS 54224 55567 . - 0 ID=cds-WP_315850238.1;Parent=gene-FJM01_RS03120;Dbxref=GenBank:WP_315850238.1;Name=WP_315850238.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: protein motif:HMM:TIGR00497.1;locus_tag=FJM01_RS03120;product=type I restriction-modification system subunit M;protein_id=WP_315850238.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 55557 55802 . - . ID=gene-FJM01_RS03510;Name=FJM01_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03510 NZ_VFSY01000029.1 GeneMarkS-2+ CDS 55557 55802 . - 0 ID=cds-WP_261368985.1;Parent=gene-FJM01_RS03510;Dbxref=GenBank:WP_261368985.1;Name=WP_261368985.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03510;product=type I restriction-modification system subunit M N-terminal domain-containing protein;protein_id=WP_261368985.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 56230 56685 . - . ID=gene-FJM01_RS03125;Name=FJM01_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03125;old_locus_tag=FJM01_03125 NZ_VFSY01000029.1 Protein Homology CDS 56230 56685 . - 0 ID=cds-WP_140701353.1;Parent=gene-FJM01_RS03125;Dbxref=GenBank:WP_140701353.1;Name=WP_140701353.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019151.7;locus_tag=FJM01_RS03125;product=GmrSD restriction endonuclease domain-containing protein;protein_id=WP_140701353.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 56657 58039 . - . ID=gene-FJM01_RS03130;Name=FJM01_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03130;old_locus_tag=FJM01_03130 NZ_VFSY01000029.1 GeneMarkS-2+ CDS 56657 58039 . - 0 ID=cds-WP_140701355.1;Parent=gene-FJM01_RS03130;Dbxref=GenBank:WP_140701355.1;Name=WP_140701355.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03130;product=DUF262 domain-containing protein;protein_id=WP_140701355.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 58160 58233 . - . ID=gene-FJM01_RS03135;Name=FJM01_RS03135;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS03135;old_locus_tag=FJM01_03135 NZ_VFSY01000029.1 tRNAscan-SE tRNA 58160 58233 . - . ID=rna-FJM01_RS03135;Parent=gene-FJM01_RS03135;anticodon=(pos:complement(58199..58201));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS03135;product=tRNA-Gly NZ_VFSY01000029.1 tRNAscan-SE exon 58160 58233 . - . ID=exon-FJM01_RS03135-1;Parent=rna-FJM01_RS03135;anticodon=(pos:complement(58199..58201));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS03135;product=tRNA-Gly NZ_VFSY01000029.1 RefSeq gene 58237 58310 . - . ID=gene-FJM01_RS03140;Name=FJM01_RS03140;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS03140;old_locus_tag=FJM01_03140 NZ_VFSY01000029.1 tRNAscan-SE tRNA 58237 58310 . - . ID=rna-FJM01_RS03140;Parent=gene-FJM01_RS03140;anticodon=(pos:complement(58276..58278));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS03140;product=tRNA-Gly NZ_VFSY01000029.1 tRNAscan-SE exon 58237 58310 . - . ID=exon-FJM01_RS03140-1;Parent=rna-FJM01_RS03140;anticodon=(pos:complement(58276..58278));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS03140;product=tRNA-Gly NZ_VFSY01000029.1 RefSeq gene 58498 60153 . + . ID=gene-FJM01_RS03145;Name=FJM01_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03145;old_locus_tag=FJM01_03145 NZ_VFSY01000029.1 Protein Homology CDS 58498 60153 . + 0 ID=cds-WP_140701357.1;Parent=gene-FJM01_RS03145;Dbxref=GenBank:WP_140701357.1;Name=WP_140701357.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033817.2;locus_tag=FJM01_RS03145;product=variable surface lipoprotein;protein_id=WP_140701357.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 60219 60294 . - . ID=gene-FJM01_RS03150;Name=FJM01_RS03150;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS03150;old_locus_tag=FJM01_03150 NZ_VFSY01000029.1 tRNAscan-SE tRNA 60219 60294 . - . ID=rna-FJM01_RS03150;Parent=gene-FJM01_RS03150;anticodon=(pos:complement(60259..60261));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS03150;product=tRNA-Arg NZ_VFSY01000029.1 tRNAscan-SE exon 60219 60294 . - . ID=exon-FJM01_RS03150-1;Parent=rna-FJM01_RS03150;anticodon=(pos:complement(60259..60261));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS03150;product=tRNA-Arg NZ_VFSY01000029.1 RefSeq gene 60340 62022 . - . ID=gene-FJM01_RS03155;Name=FJM01_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03155;old_locus_tag=FJM01_03155 NZ_VFSY01000029.1 Protein Homology CDS 60340 62022 . - 0 ID=cds-WP_140701359.1;Parent=gene-FJM01_RS03155;Dbxref=GenBank:WP_140701359.1;Name=WP_140701359.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020048.7;locus_tag=FJM01_RS03155;product=GIY-YIG nuclease family protein;protein_id=WP_140701359.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 62012 62944 . - . ID=gene-FJM01_RS03160;Name=FJM01_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03160;old_locus_tag=FJM01_03160 NZ_VFSY01000029.1 GeneMarkS-2+ CDS 62012 62944 . - 0 ID=cds-WP_124724082.1;Parent=gene-FJM01_RS03160;Dbxref=GenBank:WP_124724082.1;Name=WP_124724082.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03160;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_124724082.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 62981 63077 . + . ID=gene-FJM01_RS03165;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=FJM01_RS03165;old_locus_tag=FJM01_03165 NZ_VFSY01000029.1 cmsearch SRP_RNA 62981 63077 . + . ID=rna-FJM01_RS03165;Parent=gene-FJM01_RS03165;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=FJM01_RS03165;product=signal recognition particle sRNA small type NZ_VFSY01000029.1 cmsearch exon 62981 63077 . + . ID=exon-FJM01_RS03165-1;Parent=rna-FJM01_RS03165;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=FJM01_RS03165;product=signal recognition particle sRNA small type NZ_VFSY01000029.1 RefSeq gene 63136 63798 . + . ID=gene-FJM01_RS03170;Name=FJM01_RS03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03170;old_locus_tag=FJM01_03170 NZ_VFSY01000029.1 GeneMarkS-2+ CDS 63136 63798 . + 0 ID=cds-WP_140701361.1;Parent=gene-FJM01_RS03170;Dbxref=GenBank:WP_140701361.1;Name=WP_140701361.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03170;product=hypothetical protein;protein_id=WP_140701361.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 63828 64313 . - . ID=gene-FJM01_RS03175;Name=FJM01_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03175;old_locus_tag=FJM01_03175 NZ_VFSY01000029.1 GeneMarkS-2+ CDS 63828 64313 . - 0 ID=cds-WP_140701363.1;Parent=gene-FJM01_RS03175;Dbxref=GenBank:WP_140701363.1;Name=WP_140701363.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03175;product=hypothetical protein;protein_id=WP_140701363.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 64490 65095 . - . ID=gene-FJM01_RS03180;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=FJM01_RS03180;old_locus_tag=FJM01_03180 NZ_VFSY01000029.1 Protein Homology CDS 64490 65095 . - 0 ID=cds-WP_124724089.1;Parent=gene-FJM01_RS03180;Dbxref=GenBank:WP_124724089.1;Name=WP_124724089.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429135.1;locus_tag=FJM01_RS03180;product=30S ribosomal protein S4;protein_id=WP_124724089.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 65333 71047 . - . ID=gene-FJM01_RS03185;Name=FJM01_RS03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03185;old_locus_tag=FJM01_03185 NZ_VFSY01000029.1 Protein Homology CDS 65333 71047 . - 0 ID=cds-WP_140701365.1;Parent=gene-FJM01_RS03185;Dbxref=GenBank:WP_140701365.1;Name=WP_140701365.1;Ontology_term=GO:0004252,GO:0009897;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: protein motif:HMM:NF045847.1;locus_tag=FJM01_RS03185;product=MGA_1079 family surface serine endopeptidase;protein_id=WP_140701365.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 71135 72745 . - . ID=gene-FJM01_RS03190;Name=FJM01_RS03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03190;old_locus_tag=FJM01_03190 NZ_VFSY01000029.1 GeneMarkS-2+ CDS 71135 72745 . - 0 ID=cds-WP_140701367.1;Parent=gene-FJM01_RS03190;Dbxref=GenBank:WP_140701367.1;Name=WP_140701367.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03190;product=hypothetical protein;protein_id=WP_140701367.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 72745 73077 . - . ID=gene-FJM01_RS03195;Name=FJM01_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03195;old_locus_tag=FJM01_03195 NZ_VFSY01000029.1 GeneMarkS-2+ CDS 72745 73077 . - 0 ID=cds-WP_140701369.1;Parent=gene-FJM01_RS03195;Dbxref=GenBank:WP_140701369.1;Name=WP_140701369.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03195;product=hypothetical protein;protein_id=WP_140701369.1;transl_table=4 NZ_VFSY01000029.1 RefSeq gene 73082 74296 . - . ID=gene-FJM01_RS03200;Name=FJM01_RS03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03200;old_locus_tag=FJM01_03200 NZ_VFSY01000029.1 GeneMarkS-2+ CDS 73082 74296 . - 0 ID=cds-WP_140701372.1;Parent=gene-FJM01_RS03200;Dbxref=GenBank:WP_140701372.1;Name=WP_140701372.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03200;product=hypothetical protein;protein_id=WP_140701372.1;transl_table=4 ##sequence-region NZ_VFSY01000021.1 1 19162 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000021.1 RefSeq region 1 19162 . + . ID=NZ_VFSY01000021.1:1..19162;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000021.1 RefSeq pseudogene 223 693 . + . ID=gene-FJM01_RS01020;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=pseudogene;locus_tag=FJM01_RS01020;old_locus_tag=FJM01_01020;pseudo=true NZ_VFSY01000021.1 Protein Homology CDS 223 693 . + 0 ID=cds-FJM01_RS01020;Parent=gene-FJM01_RS01020;Note=internal stop;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: protein motif:HMM:NF013766.8;locus_tag=FJM01_RS01020;product=peptide-methionine (S)-S-oxide reductase MsrA;pseudo=true;transl_table=4 NZ_VFSY01000021.1 RefSeq gene 747 1751 . - . ID=gene-FJM01_RS01025;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=FJM01_RS01025;old_locus_tag=FJM01_01025 NZ_VFSY01000021.1 Protein Homology CDS 747 1751 . - 0 ID=cds-WP_124724278.1;Parent=gene-FJM01_RS01025;Dbxref=GenBank:WP_124724278.1;Name=WP_124724278.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011166850.1;locus_tag=FJM01_RS01025;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_124724278.1;transl_table=4 NZ_VFSY01000021.1 RefSeq gene 1834 1924 . - . ID=gene-FJM01_RS01030;Name=FJM01_RS01030;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS01030;old_locus_tag=FJM01_01030 NZ_VFSY01000021.1 tRNAscan-SE tRNA 1834 1924 . - . ID=rna-FJM01_RS01030;Parent=gene-FJM01_RS01030;anticodon=(pos:complement(1887..1889));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS01030;product=tRNA-Ser NZ_VFSY01000021.1 tRNAscan-SE exon 1834 1924 . - . ID=exon-FJM01_RS01030-1;Parent=rna-FJM01_RS01030;anticodon=(pos:complement(1887..1889));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS01030;product=tRNA-Ser NZ_VFSY01000021.1 RefSeq gene 1969 2853 . - . ID=gene-FJM01_RS01035;Name=FJM01_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01035;old_locus_tag=FJM01_01035 NZ_VFSY01000021.1 Protein Homology CDS 1969 2853 . - 0 ID=cds-WP_186390752.1;Parent=gene-FJM01_RS01035;Dbxref=GenBank:WP_186390752.1;Name=WP_186390752.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012774.7;locus_tag=FJM01_RS01035;product=thermonuclease family protein;protein_id=WP_186390752.1;transl_table=4 NZ_VFSY01000021.1 RefSeq pseudogene 2819 3689 . - . ID=gene-FJM01_RS03665;Name=FJM01_RS03665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=FJM01_RS03665;pseudo=true NZ_VFSY01000021.1 Protein Homology CDS 2819 3689 . - 0 ID=cds-FJM01_RS03665;Parent=gene-FJM01_RS03665;Note=frameshifted;Ontology_term=GO:0005975,GO:0008270,GO:0016832;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF013296.7;locus_tag=FJM01_RS03665;product=class II fructose-bisphosphate aldolase;pseudo=true;transl_table=4 NZ_VFSY01000021.1 RefSeq gene 3726 3983 . - . ID=gene-FJM01_RS01050;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=FJM01_RS01050;old_locus_tag=FJM01_01050 NZ_VFSY01000021.1 GeneMarkS-2+ CDS 3726 3983 . - 0 ID=cds-WP_140700975.1;Parent=gene-FJM01_RS01050;Dbxref=GenBank:WP_140700975.1;Name=WP_140700975.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoE;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01050;product=DNA-directed RNA polymerase subunit delta;protein_id=WP_140700975.1;transl_table=4 NZ_VFSY01000021.1 RefSeq gene 4266 5498 . + . ID=gene-FJM01_RS01055;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=FJM01_RS01055;old_locus_tag=FJM01_01055 NZ_VFSY01000021.1 Protein Homology CDS 4266 5498 . + 0 ID=cds-WP_124724282.1;Parent=gene-FJM01_RS01055;Dbxref=GenBank:WP_124724282.1;Name=WP_124724282.1;Ontology_term=GO:0006527,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054668.1;locus_tag=FJM01_RS01055;product=arginine deiminase;protein_id=WP_124724282.1;transl_table=4 NZ_VFSY01000021.1 RefSeq gene 5558 6223 . - . ID=gene-FJM01_RS01060;Name=FJM01_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01060;old_locus_tag=FJM01_01060 NZ_VFSY01000021.1 Protein Homology CDS 5558 6223 . - 0 ID=cds-WP_124724283.1;Parent=gene-FJM01_RS01060;Dbxref=GenBank:WP_124724283.1;Name=WP_124724283.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015587625.1;locus_tag=FJM01_RS01060;product=chromate transporter;protein_id=WP_124724283.1;transl_table=4 NZ_VFSY01000021.1 RefSeq gene 6223 6897 . - . ID=gene-FJM01_RS01065;Name=FJM01_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01065;old_locus_tag=FJM01_01065 NZ_VFSY01000021.1 Protein Homology CDS 6223 6897 . - 0 ID=cds-WP_124724284.1;Parent=gene-FJM01_RS01065;Dbxref=GenBank:WP_124724284.1;Name=WP_124724284.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054406.1;locus_tag=FJM01_RS01065;product=chromate transporter;protein_id=WP_124724284.1;transl_table=4 NZ_VFSY01000021.1 RefSeq gene 6897 7382 . - . ID=gene-FJM01_RS01070;Name=FJM01_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01070;old_locus_tag=FJM01_01070 NZ_VFSY01000021.1 Protein Homology CDS 6897 7382 . - 0 ID=cds-WP_124724285.1;Parent=gene-FJM01_RS01070;Dbxref=GenBank:WP_124724285.1;Name=WP_124724285.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020341.7;locus_tag=FJM01_RS01070;product=dUTP diphosphatase;protein_id=WP_124724285.1;transl_table=4 NZ_VFSY01000021.1 RefSeq gene 7443 7526 . + . ID=gene-FJM01_RS01075;Name=FJM01_RS01075;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS01075;old_locus_tag=FJM01_01075 NZ_VFSY01000021.1 tRNAscan-SE tRNA 7443 7526 . + . ID=rna-FJM01_RS01075;Parent=gene-FJM01_RS01075;anticodon=(pos:7476..7478);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS01075;product=tRNA-Leu NZ_VFSY01000021.1 tRNAscan-SE exon 7443 7526 . + . ID=exon-FJM01_RS01075-1;Parent=rna-FJM01_RS01075;anticodon=(pos:7476..7478);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS01075;product=tRNA-Leu NZ_VFSY01000021.1 RefSeq gene 7621 8430 . + . ID=gene-FJM01_RS01080;Name=FJM01_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01080;old_locus_tag=FJM01_01080 NZ_VFSY01000021.1 GeneMarkS-2+ CDS 7621 8430 . + 0 ID=cds-WP_140700976.1;Parent=gene-FJM01_RS01080;Dbxref=GenBank:WP_140700976.1;Name=WP_140700976.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01080;product=hypothetical protein;protein_id=WP_140700976.1;transl_table=4 NZ_VFSY01000021.1 RefSeq gene 8456 8947 . - . ID=gene-FJM01_RS01085;Name=FJM01_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01085;old_locus_tag=FJM01_01085 NZ_VFSY01000021.1 GeneMarkS-2+ CDS 8456 8947 . - 0 ID=cds-WP_140700977.1;Parent=gene-FJM01_RS01085;Dbxref=GenBank:WP_140700977.1;Name=WP_140700977.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01085;product=hypothetical protein;protein_id=WP_140700977.1;transl_table=4 NZ_VFSY01000021.1 RefSeq gene 9043 9405 . - . ID=gene-FJM01_RS01090;Name=FJM01_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01090;old_locus_tag=FJM01_01090 NZ_VFSY01000021.1 GeneMarkS-2+ CDS 9043 9405 . - 0 ID=cds-WP_140700978.1;Parent=gene-FJM01_RS01090;Dbxref=GenBank:WP_140700978.1;Name=WP_140700978.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01090;product=hypothetical protein;protein_id=WP_140700978.1;transl_table=4 NZ_VFSY01000021.1 RefSeq gene 9514 10935 . - . ID=gene-FJM01_RS01095;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=FJM01_RS01095;old_locus_tag=FJM01_01095 NZ_VFSY01000021.1 Protein Homology CDS 9514 10935 . - 0 ID=cds-WP_124724288.1;Parent=gene-FJM01_RS01095;Dbxref=GenBank:WP_124724288.1;Name=WP_124724288.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020862588.1;locus_tag=FJM01_RS01095;product=pyruvate kinase;protein_id=WP_124724288.1;transl_table=4 NZ_VFSY01000021.1 RefSeq gene 11202 12023 . - . ID=gene-FJM01_RS01100;Name=FJM01_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01100;old_locus_tag=FJM01_01100 NZ_VFSY01000021.1 Protein Homology CDS 11202 12023 . - 0 ID=cds-WP_140700979.1;Parent=gene-FJM01_RS01100;Dbxref=GenBank:WP_140700979.1;Name=WP_140700979.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033817.2;locus_tag=FJM01_RS01100;product=variable surface lipoprotein;protein_id=WP_140700979.1;transl_table=4 NZ_VFSY01000021.1 RefSeq gene 12292 13482 . + . ID=gene-FJM01_RS01105;Name=FJM01_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01105;old_locus_tag=FJM01_01105 NZ_VFSY01000021.1 Protein Homology CDS 12292 13482 . + 0 ID=cds-WP_140700980.1;Parent=gene-FJM01_RS01105;Dbxref=GenBank:WP_140700980.1;Name=WP_140700980.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054554.1;locus_tag=FJM01_RS01105;product=phosphopentomutase;protein_id=WP_140700980.1;transl_table=4 NZ_VFSY01000021.1 RefSeq gene 13553 14986 . + . ID=gene-FJM01_RS01110;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=FJM01_RS01110;old_locus_tag=FJM01_01110 NZ_VFSY01000021.1 Protein Homology CDS 13553 14986 . + 0 ID=cds-WP_140700981.1;Parent=gene-FJM01_RS01110;Dbxref=GenBank:WP_140700981.1;Name=WP_140700981.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054353.1;locus_tag=FJM01_RS01110;product=proline--tRNA ligase;protein_id=WP_140700981.1;transl_table=4 NZ_VFSY01000021.1 RefSeq gene 15010 15321 . + . ID=gene-FJM01_RS01115;Name=FJM01_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01115;old_locus_tag=FJM01_01115 NZ_VFSY01000021.1 Protein Homology CDS 15010 15321 . + 0 ID=cds-WP_261368947.1;Parent=gene-FJM01_RS01115;Dbxref=GenBank:WP_261368947.1;Name=WP_261368947.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: protein motif:HMM:NF012314.7;locus_tag=FJM01_RS01115;product=thioredoxin family protein;protein_id=WP_261368947.1;transl_table=4 NZ_VFSY01000021.1 RefSeq gene 15373 15732 . - . ID=gene-FJM01_RS03525;Name=FJM01_RS03525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03525 NZ_VFSY01000021.1 Protein Homology CDS 15373 15732 . - 0 ID=cds-WP_315850230.1;Parent=gene-FJM01_RS03525;Dbxref=GenBank:WP_315850230.1;Name=WP_315850230.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014610.7;locus_tag=FJM01_RS03525;product=adenine nucleotide alpha hydrolase family protein;protein_id=WP_315850230.1;transl_table=4 NZ_VFSY01000021.1 RefSeq gene 15614 16525 . - . ID=gene-FJM01_RS01120;Name=FJM01_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01120;old_locus_tag=FJM01_01120 NZ_VFSY01000021.1 Protein Homology CDS 15614 16525 . - 0 ID=cds-WP_315850231.1;Parent=gene-FJM01_RS01120;Dbxref=GenBank:WP_315850231.1;Name=WP_315850231.1;Ontology_term=GO:0009228,GO:0000049,GO:0004810,GO:0005524,GO:0140741;gbkey=CDS;go_function=tRNA binding|0000049||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA,tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: protein motif:HMM:NF014610.7;locus_tag=FJM01_RS01120;product=tRNA sulfurtransferase;protein_id=WP_315850231.1;transl_table=4 NZ_VFSY01000021.1 RefSeq gene 16527 17831 . - . ID=gene-FJM01_RS01125;Name=FJM01_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01125;old_locus_tag=FJM01_01125 NZ_VFSY01000021.1 GeneMarkS-2+ CDS 16527 17831 . - 0 ID=cds-WP_140700982.1;Parent=gene-FJM01_RS01125;Dbxref=GenBank:WP_140700982.1;Name=WP_140700982.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01125;product=hypothetical protein;protein_id=WP_140700982.1;transl_table=4 NZ_VFSY01000021.1 RefSeq gene 17902 18048 . + . ID=gene-FJM01_RS01130;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=FJM01_RS01130;old_locus_tag=FJM01_01130 NZ_VFSY01000021.1 Protein Homology CDS 17902 18048 . + 0 ID=cds-WP_124724294.1;Parent=gene-FJM01_RS01130;Dbxref=GenBank:WP_124724294.1;Name=WP_124724294.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014272127.1;locus_tag=FJM01_RS01130;product=50S ribosomal protein L33;protein_id=WP_124724294.1;transl_table=4 NZ_VFSY01000021.1 RefSeq gene 18048 18257 . + . ID=gene-FJM01_RS01135;Name=FJM01_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01135;old_locus_tag=FJM01_01135 NZ_VFSY01000021.1 GeneMarkS-2+ CDS 18048 18257 . + 0 ID=cds-WP_124724295.1;Parent=gene-FJM01_RS01135;Dbxref=GenBank:WP_124724295.1;Name=WP_124724295.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01135;product=preprotein translocase subunit SecE;protein_id=WP_124724295.1;transl_table=4 NZ_VFSY01000021.1 RefSeq gene 18270 18848 . + . ID=gene-FJM01_RS01140;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=FJM01_RS01140;old_locus_tag=FJM01_01140 NZ_VFSY01000021.1 Protein Homology CDS 18270 18848 . + 0 ID=cds-WP_140700983.1;Parent=gene-FJM01_RS01140;Dbxref=GenBank:WP_140700983.1;Name=WP_140700983.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054218.1;locus_tag=FJM01_RS01140;product=transcription termination/antitermination protein NusG;protein_id=WP_140700983.1;transl_table=4 NZ_VFSY01000021.1 RefSeq gene 19030 19162 . + . ID=gene-FJM01_RS01145;Name=FJM01_RS01145;end_range=19162,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=FJM01_RS01145;old_locus_tag=FJM01_01145;partial=true NZ_VFSY01000021.1 cmsearch rRNA 19030 19162 . + . ID=rna-FJM01_RS01145;Parent=gene-FJM01_RS01145;Dbxref=RFAM:RF00177;end_range=19162,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=FJM01_RS01145;partial=true;product=16S ribosomal RNA NZ_VFSY01000021.1 cmsearch exon 19030 19162 . + . ID=exon-FJM01_RS01145-1;Parent=rna-FJM01_RS01145;Dbxref=RFAM:RF00177;end_range=19162,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=FJM01_RS01145;partial=true;product=16S ribosomal RNA ##sequence-region NZ_VFSY01000022.1 1 49509 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000022.1 RefSeq region 1 49509 . + . ID=NZ_VFSY01000022.1:1..49509;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000022.1 RefSeq gene 389 853 . + . ID=gene-FJM01_RS03580;Name=FJM01_RS03580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03580 NZ_VFSY01000022.1 Protein Homology CDS 389 853 . + 0 ID=cds-WP_334199140.1;Parent=gene-FJM01_RS03580;Dbxref=GenBank:WP_334199140.1;Name=WP_334199140.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017181.7;locus_tag=FJM01_RS03580;product=zinc-binding metallopeptidase family protein;protein_id=WP_334199140.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 840 1475 . + . ID=gene-FJM01_RS03585;Name=FJM01_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03585 NZ_VFSY01000022.1 Protein Homology CDS 840 1475 . + 0 ID=cds-WP_334199141.1;Parent=gene-FJM01_RS03585;Dbxref=GenBank:WP_334199141.1;Name=WP_334199141.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017181.7;locus_tag=FJM01_RS03585;product=zinc-binding metallopeptidase family protein;protein_id=WP_334199141.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 1557 1943 . + . ID=gene-FJM01_RS01155;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=FJM01_RS01155;old_locus_tag=FJM01_01155 NZ_VFSY01000022.1 Protein Homology CDS 1557 1943 . + 0 ID=cds-WP_124724298.1;Parent=gene-FJM01_RS01155;Dbxref=GenBank:WP_124724298.1;Name=WP_124724298.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: protein motif:HMM:NF014426.7;locus_tag=FJM01_RS01155;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_124724298.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 1945 2508 . + . ID=gene-FJM01_RS01160;Name=FJM01_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01160;old_locus_tag=FJM01_01160 NZ_VFSY01000022.1 Protein Homology CDS 1945 2508 . + 0 ID=cds-WP_124724299.1;Parent=gene-FJM01_RS01160;Dbxref=GenBank:WP_124724299.1;Name=WP_124724299.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013012.7;locus_tag=FJM01_RS01160;product=hypothetical protein;protein_id=WP_124724299.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 2510 3442 . + . ID=gene-FJM01_RS01165;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=FJM01_RS01165;old_locus_tag=FJM01_01165 NZ_VFSY01000022.1 Protein Homology CDS 2510 3442 . + 0 ID=cds-WP_140700985.1;Parent=gene-FJM01_RS01165;Dbxref=GenBank:WP_140700985.1;Name=WP_140700985.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054667.1;locus_tag=FJM01_RS01165;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_140700985.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 3445 3954 . + . ID=gene-FJM01_RS01170;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=FJM01_RS01170;old_locus_tag=FJM01_01170 NZ_VFSY01000022.1 Protein Homology CDS 3445 3954 . + 0 ID=cds-WP_261368948.1;Parent=gene-FJM01_RS01170;Dbxref=GenBank:WP_261368948.1;Name=WP_261368948.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: protein motif:HMM:TIGR03598.1;locus_tag=FJM01_RS01170;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_261368948.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 4112 5332 . + . ID=gene-FJM01_RS03415;Name=FJM01_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03415 NZ_VFSY01000022.1 Protein Homology CDS 4112 5332 . + 0 ID=cds-WP_261368949.1;Parent=gene-FJM01_RS03415;Dbxref=GenBank:WP_261368949.1;Name=WP_261368949.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF051211.3;locus_tag=FJM01_RS03415;product=GGDEF domain-containing protein;protein_id=WP_261368949.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 5319 5996 . + . ID=gene-FJM01_RS03420;Name=FJM01_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03420 NZ_VFSY01000022.1 Protein Homology CDS 5319 5996 . + 0 ID=cds-WP_261368950.1;Parent=gene-FJM01_RS03420;Dbxref=GenBank:WP_261368950.1;Name=WP_261368950.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: protein motif:HMM:NF014342.7;locus_tag=FJM01_RS03420;product=DHHA1 domain-containing protein;protein_id=WP_261368950.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 5977 6414 . + . ID=gene-FJM01_RS01180;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=FJM01_RS01180;old_locus_tag=FJM01_01180 NZ_VFSY01000022.1 Protein Homology CDS 5977 6414 . + 0 ID=cds-WP_124724303.1;Parent=gene-FJM01_RS01180;Dbxref=GenBank:WP_124724303.1;Name=WP_124724303.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:TIGR00158.1;locus_tag=FJM01_RS01180;product=50S ribosomal protein L9;protein_id=WP_124724303.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 6436 7902 . + . ID=gene-FJM01_RS01185;Name=FJM01_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01185;old_locus_tag=FJM01_01185 NZ_VFSY01000022.1 Protein Homology CDS 6436 7902 . + 0 ID=cds-WP_140700986.1;Parent=gene-FJM01_RS01185;Dbxref=GenBank:WP_140700986.1;Name=WP_140700986.1;Ontology_term=GO:0006260,GO:0006269,GO:0003677,GO:0003678,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA replication|0006260||IEA,DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: protein motif:HMM:NF015736.7;locus_tag=FJM01_RS01185;product=replicative DNA helicase;protein_id=WP_140700986.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 7908 9329 . + . ID=gene-FJM01_RS01190;Name=FJM01_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01190;old_locus_tag=FJM01_01190 NZ_VFSY01000022.1 GeneMarkS-2+ CDS 7908 9329 . + 0 ID=cds-WP_140700987.1;Parent=gene-FJM01_RS01190;Dbxref=GenBank:WP_140700987.1;Name=WP_140700987.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01190;product=YitT family protein;protein_id=WP_140700987.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 9420 10718 . + . ID=gene-FJM01_RS01195;Name=FJM01_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01195;old_locus_tag=FJM01_01195 NZ_VFSY01000022.1 GeneMarkS-2+ CDS 9420 10718 . + 0 ID=cds-WP_140700988.1;Parent=gene-FJM01_RS01195;Dbxref=GenBank:WP_140700988.1;Name=WP_140700988.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01195;product=YitT family protein;protein_id=WP_140700988.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 10756 11220 . - . ID=gene-FJM01_RS01200;Name=FJM01_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01200;old_locus_tag=FJM01_01200 NZ_VFSY01000022.1 Protein Homology CDS 10756 11220 . - 0 ID=cds-WP_124724307.1;Parent=gene-FJM01_RS01200;Dbxref=GenBank:WP_124724307.1;Name=WP_124724307.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:TIGR00689.1;locus_tag=FJM01_RS01200;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_124724307.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 11232 11699 . - . ID=gene-FJM01_RS01205;Name=FJM01_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01205;old_locus_tag=FJM01_01205 NZ_VFSY01000022.1 Protein Homology CDS 11232 11699 . - 0 ID=cds-WP_124724308.1;Parent=gene-FJM01_RS01205;Dbxref=GenBank:WP_124724308.1;Name=WP_124724308.1;Ontology_term=GO:0000166,GO:0003725,GO:0005524,GO:0061710;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA,L-threonylcarbamoyladenylate synthase activity|0061710||IEA;inference=COORDINATES: protein motif:HMM:NF013468.8;locus_tag=FJM01_RS01205;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_124724308.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 11737 12561 . + . ID=gene-FJM01_RS01210;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=FJM01_RS01210;old_locus_tag=FJM01_01210 NZ_VFSY01000022.1 Protein Homology CDS 11737 12561 . + 0 ID=cds-WP_140700989.1;Parent=gene-FJM01_RS01210;Dbxref=GenBank:WP_140700989.1;Name=WP_140700989.1;Ontology_term=GO:0006281,GO:0008534,GO:0046872,GO:0005737;gbkey=CDS;gene=mutM;go_component=cytoplasm|0005737||IEA;go_function=oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: protein motif:HMM:NF002211.1;locus_tag=FJM01_RS01210;product=DNA-formamidopyrimidine glycosylase;protein_id=WP_140700989.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 12561 12800 . + . ID=gene-FJM01_RS01215;Name=FJM01_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01215;old_locus_tag=FJM01_01215 NZ_VFSY01000022.1 Protein Homology CDS 12561 12800 . + 0 ID=cds-WP_124724310.1;Parent=gene-FJM01_RS01215;Dbxref=GenBank:WP_124724310.1;Name=WP_124724310.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013844.8;locus_tag=FJM01_RS01215;product=Smr/MutS family protein;protein_id=WP_124724310.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 12840 13901 . - . ID=gene-FJM01_RS01220;Name=FJM01_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01220;old_locus_tag=FJM01_01220 NZ_VFSY01000022.1 Protein Homology CDS 12840 13901 . - 0 ID=cds-WP_186390753.1;Parent=gene-FJM01_RS01220;Dbxref=GenBank:WP_186390753.1;Name=WP_186390753.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:TIGR04526.1;locus_tag=FJM01_RS01220;product=putative immunoglobulin-blocking virulence protein;protein_id=WP_186390753.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 13909 15495 . - . ID=gene-FJM01_RS01225;Name=FJM01_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01225;old_locus_tag=FJM01_01225 NZ_VFSY01000022.1 GeneMarkS-2+ CDS 13909 15495 . - 0 ID=cds-WP_140700991.1;Parent=gene-FJM01_RS01225;Dbxref=GenBank:WP_140700991.1;Name=WP_140700991.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01225;product=hypothetical protein;protein_id=WP_140700991.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 15505 17826 . - . ID=gene-FJM01_RS01230;Name=mip;gbkey=Gene;gene=mip;gene_biotype=protein_coding;locus_tag=FJM01_RS01230;old_locus_tag=FJM01_01230 NZ_VFSY01000022.1 Protein Homology CDS 15505 17826 . - 0 ID=cds-WP_140700992.1;Parent=gene-FJM01_RS01230;Dbxref=GenBank:WP_140700992.1;Name=WP_140700992.1;gbkey=CDS;gene=mip;inference=COORDINATES: protein motif:HMM:NF045842.1;locus_tag=FJM01_RS01230;product=Ig-specific serine endopeptidase MIP;protein_id=WP_140700992.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 17880 18266 . - . ID=gene-FJM01_RS03590;Name=FJM01_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03590 NZ_VFSY01000022.1 Protein Homology CDS 17880 18266 . - 0 ID=cds-WP_416371552.1;Parent=gene-FJM01_RS03590;Dbxref=GenBank:WP_416371552.1;Name=WP_416371552.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047300.3;locus_tag=FJM01_RS03590;product=ATP synthase beta subunit C-terminal domain-containing protein;protein_id=WP_416371552.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 18230 18985 . - . ID=gene-FJM01_RS03595;Name=FJM01_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03595 NZ_VFSY01000022.1 Protein Homology CDS 18230 18985 . - 0 ID=cds-WP_334199143.1;Parent=gene-FJM01_RS03595;Dbxref=GenBank:WP_334199143.1;Name=WP_334199143.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012236.7;locus_tag=FJM01_RS03595;product=P-loop NTPase family protein;protein_id=WP_334199143.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 19053 19295 . - . ID=gene-FJM01_RS03600;Name=FJM01_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03600 NZ_VFSY01000022.1 GeneMarkS-2+ CDS 19053 19295 . - 0 ID=cds-WP_334199144.1;Parent=gene-FJM01_RS03600;Dbxref=GenBank:WP_334199144.1;Name=WP_334199144.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03600;product=hypothetical protein;protein_id=WP_334199144.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 19295 20827 . - . ID=gene-FJM01_RS01240;Name=FJM01_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01240;old_locus_tag=FJM01_01240 NZ_VFSY01000022.1 Protein Homology CDS 19295 20827 . - 0 ID=cds-WP_140700993.1;Parent=gene-FJM01_RS01240;Dbxref=GenBank:WP_140700993.1;Name=WP_140700993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054274.1;locus_tag=FJM01_RS01240;product=MSC_0619 family F1-like ATPase alpha subunit;protein_id=WP_140700993.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 20838 21212 . - . ID=gene-FJM01_RS01245;Name=FJM01_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01245;old_locus_tag=FJM01_01245 NZ_VFSY01000022.1 GeneMarkS-2+ CDS 20838 21212 . - 0 ID=cds-WP_140700994.1;Parent=gene-FJM01_RS01245;Dbxref=GenBank:WP_140700994.1;Name=WP_140700994.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01245;product=hypothetical protein;protein_id=WP_140700994.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 21262 23004 . - . ID=gene-FJM01_RS01250;Name=FJM01_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01250;old_locus_tag=FJM01_01250 NZ_VFSY01000022.1 Protein Homology CDS 21262 23004 . - 0 ID=cds-WP_140700995.1;Parent=gene-FJM01_RS01250;Dbxref=GenBank:WP_140700995.1;Name=WP_140700995.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045829.1;locus_tag=FJM01_RS01250;product=MSC_0620 family F1-like ATPase-associated subunit;protein_id=WP_140700995.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 23074 23466 . - . ID=gene-FJM01_RS01255;Name=FJM01_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01255;old_locus_tag=FJM01_01255 NZ_VFSY01000022.1 Protein Homology CDS 23074 23466 . - 0 ID=cds-WP_140700996.1;Parent=gene-FJM01_RS01255;Dbxref=GenBank:WP_140700996.1;Name=WP_140700996.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045935.1;locus_tag=FJM01_RS01255;product=MSC_0621 family F1-like ATPase epsilon subunit;protein_id=WP_140700996.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 23456 24355 . - . ID=gene-FJM01_RS01260;Name=FJM01_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01260;old_locus_tag=FJM01_01260 NZ_VFSY01000022.1 Protein Homology CDS 23456 24355 . - 0 ID=cds-WP_140700997.1;Parent=gene-FJM01_RS01260;Dbxref=GenBank:WP_140700997.1;Name=WP_140700997.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045933.1;locus_tag=FJM01_RS01260;product=MSC_0622 family F1-like ATPase gamma subunit;protein_id=WP_140700997.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 24345 24872 . - . ID=gene-FJM01_RS01265;Name=FJM01_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01265;old_locus_tag=FJM01_01265 NZ_VFSY01000022.1 Protein Homology CDS 24345 24872 . - 0 ID=cds-WP_140700998.1;Parent=gene-FJM01_RS01265;Dbxref=GenBank:WP_140700998.1;Name=WP_140700998.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022351.7;locus_tag=FJM01_RS01265;product=MSC_0623 family F1-like ATPase-associated protein;protein_id=WP_140700998.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 24865 25800 . - . ID=gene-FJM01_RS01270;Name=FJM01_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01270;old_locus_tag=FJM01_01270 NZ_VFSY01000022.1 Protein Homology CDS 24865 25800 . - 0 ID=cds-WP_416371553.1;Parent=gene-FJM01_RS01270;Dbxref=GenBank:WP_416371553.1;Name=WP_416371553.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045937.1;locus_tag=FJM01_RS01270;product=MSC_0624 family F1-like ATPase-associated membrane protein;protein_id=WP_416371553.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 25776 26261 . - . ID=gene-FJM01_RS01275;Name=FJM01_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01275;old_locus_tag=FJM01_01275 NZ_VFSY01000022.1 GeneMarkS-2+ CDS 25776 26261 . - 0 ID=cds-WP_140701000.1;Parent=gene-FJM01_RS01275;Dbxref=GenBank:WP_140701000.1;Name=WP_140701000.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01275;product=hypothetical protein;protein_id=WP_140701000.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 26268 28943 . - . ID=gene-FJM01_RS01280;Name=FJM01_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01280;old_locus_tag=FJM01_01280 NZ_VFSY01000022.1 Protein Homology CDS 26268 28943 . - 0 ID=cds-WP_140701001.1;Parent=gene-FJM01_RS01280;Dbxref=GenBank:WP_140701001.1;Name=WP_140701001.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:TIGR04526.1;locus_tag=FJM01_RS01280;product=putative immunoglobulin-blocking virulence protein;protein_id=WP_140701001.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 28963 31233 . - . ID=gene-FJM01_RS01285;Name=mip;gbkey=Gene;gene=mip;gene_biotype=protein_coding;locus_tag=FJM01_RS01285;old_locus_tag=FJM01_01285 NZ_VFSY01000022.1 Protein Homology CDS 28963 31233 . - 0 ID=cds-WP_140701002.1;Parent=gene-FJM01_RS01285;Dbxref=GenBank:WP_140701002.1;Name=WP_140701002.1;gbkey=CDS;gene=mip;inference=COORDINATES: protein motif:HMM:NF045842.1;locus_tag=FJM01_RS01285;product=Ig-specific serine endopeptidase MIP;protein_id=WP_140701002.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 31398 32444 . - . ID=gene-FJM01_RS01290;Name=FJM01_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01290;old_locus_tag=FJM01_01290 NZ_VFSY01000022.1 Protein Homology CDS 31398 32444 . - 0 ID=cds-WP_140701003.1;Parent=gene-FJM01_RS01290;Dbxref=GenBank:WP_140701003.1;Name=WP_140701003.1;Ontology_term=GO:0006508,GO:0008236,GO:0016787;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF036772.7;locus_tag=FJM01_RS01290;product=S66 family peptidase;protein_id=WP_140701003.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 32517 33083 . - . ID=gene-FJM01_RS01295;Name=FJM01_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01295;old_locus_tag=FJM01_01295 NZ_VFSY01000022.1 Protein Homology CDS 32517 33083 . - 0 ID=cds-WP_124724324.1;Parent=gene-FJM01_RS01295;Dbxref=GenBank:WP_124724324.1;Name=WP_124724324.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014068.7;locus_tag=FJM01_RS01295;product=DJ-1/PfpI family protein;protein_id=WP_124724324.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 33352 34329 . + . ID=gene-FJM01_RS01300;Name=FJM01_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01300;old_locus_tag=FJM01_01300 NZ_VFSY01000022.1 Protein Homology CDS 33352 34329 . + 0 ID=cds-WP_140701004.1;Parent=gene-FJM01_RS01300;Dbxref=GenBank:WP_140701004.1;Name=WP_140701004.1;Ontology_term=GO:0003676,GO:0042578;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,phosphoric ester hydrolase activity|0042578||IEA;inference=COORDINATES: protein motif:HMM:NF013528.8;locus_tag=FJM01_RS01300;product=bifunctional oligoribonuclease/PAP phosphatase NrnA;protein_id=WP_140701004.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 34629 35303 . + . ID=gene-FJM01_RS01305;Name=FJM01_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01305;old_locus_tag=FJM01_01305 NZ_VFSY01000022.1 Protein Homology CDS 34629 35303 . + 0 ID=cds-WP_261368951.1;Parent=gene-FJM01_RS01305;Dbxref=GenBank:WP_261368951.1;Name=WP_261368951.1;Ontology_term=GO:0003676,GO:0042578;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,phosphoric ester hydrolase activity|0042578||IEA;inference=COORDINATES: protein motif:HMM:NF014342.7;locus_tag=FJM01_RS01305;product=DHH family phosphoesterase;protein_id=WP_261368951.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 35426 36895 . + . ID=gene-FJM01_RS01310;Name=FJM01_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01310;old_locus_tag=FJM01_01310 NZ_VFSY01000022.1 GeneMarkS-2+ CDS 35426 36895 . + 0 ID=cds-WP_140701005.1;Parent=gene-FJM01_RS01310;Dbxref=GenBank:WP_140701005.1;Name=WP_140701005.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01310;product=variable surface lipoprotein;protein_id=WP_140701005.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 36925 37569 . - . ID=gene-FJM01_RS01315;Name=FJM01_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01315;old_locus_tag=FJM01_01315 NZ_VFSY01000022.1 GeneMarkS-2+ CDS 36925 37569 . - 0 ID=cds-WP_140701006.1;Parent=gene-FJM01_RS01315;Dbxref=GenBank:WP_140701006.1;Name=WP_140701006.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01315;product=hypothetical protein;protein_id=WP_140701006.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 37579 38586 . - . ID=gene-FJM01_RS01320;Name=FJM01_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01320;old_locus_tag=FJM01_01320 NZ_VFSY01000022.1 Protein Homology CDS 37579 38586 . - 0 ID=cds-WP_124724329.1;Parent=gene-FJM01_RS01320;Dbxref=GenBank:WP_124724329.1;Name=WP_124724329.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF005529.0;locus_tag=FJM01_RS01320;product=nicotinate phosphoribosyltransferase;protein_id=WP_124724329.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 38715 39077 . + . ID=gene-FJM01_RS01325;Name=FJM01_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01325;old_locus_tag=FJM01_01325 NZ_VFSY01000022.1 GeneMarkS-2+ CDS 38715 39077 . + 0 ID=cds-WP_124724330.1;Parent=gene-FJM01_RS01325;Dbxref=GenBank:WP_124724330.1;Name=WP_124724330.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01325;product=hypothetical protein;protein_id=WP_124724330.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 39150 41111 . - . ID=gene-FJM01_RS01330;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=FJM01_RS01330;old_locus_tag=FJM01_01330 NZ_VFSY01000022.1 Protein Homology CDS 39150 41111 . - 0 ID=cds-WP_261368952.1;Parent=gene-FJM01_RS01330;Dbxref=GenBank:WP_261368952.1;Name=WP_261368952.1;gbkey=CDS;gene=yidC;inference=COORDINATES: protein motif:HMM:NF002567.0;locus_tag=FJM01_RS01330;product=membrane protein insertase YidC;protein_id=WP_261368952.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 41141 41470 . - . ID=gene-FJM01_RS01335;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=FJM01_RS01335;old_locus_tag=FJM01_01335 NZ_VFSY01000022.1 Protein Homology CDS 41141 41470 . - 0 ID=cds-WP_140701007.1;Parent=gene-FJM01_RS01335;Dbxref=GenBank:WP_140701007.1;Name=WP_140701007.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: protein motif:HMM:TIGR00188.1;locus_tag=FJM01_RS01335;product=ribonuclease P protein component;protein_id=WP_140701007.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 41502 41648 . - . ID=gene-FJM01_RS01340;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=FJM01_RS01340;old_locus_tag=FJM01_01340 NZ_VFSY01000022.1 Protein Homology CDS 41502 41648 . - 0 ID=cds-WP_002881399.1;Parent=gene-FJM01_RS01340;Dbxref=GenBank:WP_002881399.1;Name=WP_002881399.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014584309.1;locus_tag=FJM01_RS01340;product=50S ribosomal protein L34;protein_id=WP_002881399.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 41984 43333 . + . ID=gene-FJM01_RS01345;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=FJM01_RS01345;old_locus_tag=FJM01_01345 NZ_VFSY01000022.1 Protein Homology CDS 41984 43333 . + 0 ID=cds-WP_124724333.1;Parent=gene-FJM01_RS01345;Dbxref=GenBank:WP_124724333.1;Name=WP_124724333.1;gbkey=CDS;gene=dnaA;inference=COORDINATES: protein motif:HMM:NF001154.0;locus_tag=FJM01_RS01345;product=chromosomal replication initiator protein DnaA;protein_id=WP_124724333.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 43346 44443 . + . ID=gene-FJM01_RS01350;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=FJM01_RS01350;old_locus_tag=FJM01_01350 NZ_VFSY01000022.1 Protein Homology CDS 43346 44443 . + 0 ID=cds-WP_140701008.1;Parent=gene-FJM01_RS01350;Dbxref=GenBank:WP_140701008.1;Name=WP_140701008.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:TIGR00663.1;locus_tag=FJM01_RS01350;product=DNA polymerase III subunit beta;protein_id=WP_140701008.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 44443 44670 . + . ID=gene-FJM01_RS01355;Name=FJM01_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01355;old_locus_tag=FJM01_01355 NZ_VFSY01000022.1 Protein Homology CDS 44443 44670 . + 0 ID=cds-WP_140701009.1;Parent=gene-FJM01_RS01355;Dbxref=GenBank:WP_140701009.1;Name=WP_140701009.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: protein motif:HMM:NF024672.7;locus_tag=FJM01_RS01355;product=RNA-binding S4 domain-containing protein;protein_id=WP_140701009.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 44741 44938 . + . ID=gene-FJM01_RS01360;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=FJM01_RS01360;old_locus_tag=FJM01_01360 NZ_VFSY01000022.1 Protein Homology CDS 44741 44938 . + 0 ID=cds-WP_124724336.1;Parent=gene-FJM01_RS01360;Dbxref=GenBank:WP_124724336.1;Name=WP_124724336.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013447791.1;locus_tag=FJM01_RS01360;product=50S ribosomal protein L28;protein_id=WP_124724336.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 44983 45756 . - . ID=gene-FJM01_RS01365;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=FJM01_RS01365;old_locus_tag=FJM01_01365 NZ_VFSY01000022.1 Protein Homology CDS 44983 45756 . - 0 ID=cds-WP_140701010.1;Parent=gene-FJM01_RS01365;Dbxref=GenBank:WP_140701010.1;Name=WP_140701010.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: protein motif:HMM:NF012616.7;locus_tag=FJM01_RS01365;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_140701010.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 45756 46517 . - . ID=gene-FJM01_RS01370;Name=FJM01_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01370;old_locus_tag=FJM01_01370 NZ_VFSY01000022.1 Protein Homology CDS 45756 46517 . - 0 ID=cds-WP_140701011.1;Parent=gene-FJM01_RS01370;Dbxref=GenBank:WP_140701011.1;Name=WP_140701011.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:TIGR00010.1;locus_tag=FJM01_RS01370;product=TatD family hydrolase;protein_id=WP_140701011.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 46519 47160 . - . ID=gene-FJM01_RS01375;Name=FJM01_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01375;old_locus_tag=FJM01_01375 NZ_VFSY01000022.1 Protein Homology CDS 46519 47160 . - 0 ID=cds-WP_124724338.1;Parent=gene-FJM01_RS01375;Dbxref=GenBank:WP_124724338.1;Name=WP_124724338.1;Ontology_term=GO:0009164,GO:0019284,GO:0019509,GO:0046124,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from S-adenosylmethionine|0019284||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA,purine deoxyribonucleoside catabolic process|0046124||IEA;inference=COORDINATES: protein motif:HMM:NF013232.7;locus_tag=FJM01_RS01375;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase family protein;protein_id=WP_124724338.1;transl_table=4 NZ_VFSY01000022.1 RefSeq pseudogene 47186 47727 . + . ID=gene-FJM01_RS01380;Name=FJM01_RS01380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=FJM01_RS01380;old_locus_tag=FJM01_01380;pseudo=true NZ_VFSY01000022.1 Protein Homology CDS 47186 47727 . + 0 ID=cds-FJM01_RS01380;Parent=gene-FJM01_RS01380;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021052.7;locus_tag=FJM01_RS01380;product=Bsp6I family type II restriction endonuclease;pseudo=true;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 47785 48912 . + . ID=gene-FJM01_RS01385;Name=dcm;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=FJM01_RS01385;old_locus_tag=FJM01_01385 NZ_VFSY01000022.1 Protein Homology CDS 47785 48912 . + 0 ID=cds-WP_124724340.1;Parent=gene-FJM01_RS01385;Dbxref=GenBank:WP_124724340.1;Name=WP_124724340.1;Ontology_term=GO:0006304,GO:0003886;gbkey=CDS;gene=dcm;go_function=DNA (cytosine-5-)-methyltransferase activity|0003886||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004429423.1;locus_tag=FJM01_RS01385;product=DNA (cytosine-5-)-methyltransferase;protein_id=WP_124724340.1;transl_table=4 NZ_VFSY01000022.1 RefSeq gene 49224 49310 . + . ID=gene-FJM01_RS01390;Name=FJM01_RS01390;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS01390;old_locus_tag=FJM01_01390 NZ_VFSY01000022.1 tRNAscan-SE tRNA 49224 49310 . + . ID=rna-FJM01_RS01390;Parent=gene-FJM01_RS01390;anticodon=(pos:49257..49259);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS01390;product=tRNA-Leu NZ_VFSY01000022.1 tRNAscan-SE exon 49224 49310 . + . ID=exon-FJM01_RS01390-1;Parent=rna-FJM01_RS01390;anticodon=(pos:49257..49259);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS01390;product=tRNA-Leu NZ_VFSY01000022.1 RefSeq gene 49316 49391 . + . ID=gene-FJM01_RS01395;Name=FJM01_RS01395;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS01395;old_locus_tag=FJM01_01395 NZ_VFSY01000022.1 tRNAscan-SE tRNA 49316 49391 . + . ID=rna-FJM01_RS01395;Parent=gene-FJM01_RS01395;anticodon=(pos:49349..49351);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS01395;product=tRNA-Lys NZ_VFSY01000022.1 tRNAscan-SE exon 49316 49391 . + . ID=exon-FJM01_RS01395-1;Parent=rna-FJM01_RS01395;anticodon=(pos:49349..49351);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS01395;product=tRNA-Lys ##sequence-region NZ_VFSY01000003.1 1 14901 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000003.1 RefSeq region 1 14901 . + . ID=NZ_VFSY01000003.1:1..14901;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000003.1 RefSeq gene 1 1478 . - . ID=gene-FJM01_RS00165;Name=FJM01_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00165;old_locus_tag=FJM01_00165;partial=true;start_range=.,1 NZ_VFSY01000003.1 Protein Homology CDS 1 1478 . - 0 ID=cds-WP_140700852.1;Parent=gene-FJM01_RS00165;Dbxref=GenBank:WP_140700852.1;Name=WP_140700852.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046356.3;locus_tag=FJM01_RS00165;partial=true;product=Tex-like N-terminal domain-containing protein;protein_id=WP_140700852.1;start_range=.,1;transl_table=4 NZ_VFSY01000003.1 RefSeq gene 1487 2434 . - . ID=gene-FJM01_RS00170;Name=pip;gbkey=Gene;gene=pip;gene_biotype=protein_coding;locus_tag=FJM01_RS00170;old_locus_tag=FJM01_00170 NZ_VFSY01000003.1 Protein Homology CDS 1487 2434 . - 0 ID=cds-WP_140700853.1;Parent=gene-FJM01_RS00170;Dbxref=GenBank:WP_140700853.1;Name=WP_140700853.1;Ontology_term=GO:0030163,GO:0004177,GO:0005737;gbkey=CDS;gene=pip;go_component=cytoplasm|0005737||IEA;go_function=aminopeptidase activity|0004177||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: protein motif:HMM:TIGR01249.1;locus_tag=FJM01_RS00170;product=prolyl aminopeptidase;protein_id=WP_140700853.1;transl_table=4 NZ_VFSY01000003.1 RefSeq gene 2553 4241 . - . ID=gene-FJM01_RS00175;Name=FJM01_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00175;old_locus_tag=FJM01_00175 NZ_VFSY01000003.1 Protein Homology CDS 2553 4241 . - 0 ID=cds-WP_261368923.1;Parent=gene-FJM01_RS00175;Dbxref=GenBank:WP_261368923.1;Name=WP_261368923.1;Ontology_term=GO:0055085,GO:0015297,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,xenobiotic transmembrane transporter activity|0042910||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013703.7;locus_tag=FJM01_RS00175;product=MATE family efflux transporter;protein_id=WP_261368923.1;transl_table=4 NZ_VFSY01000003.1 RefSeq gene 4252 5028 . - . ID=gene-FJM01_RS00180;Name=FJM01_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00180;old_locus_tag=FJM01_00180 NZ_VFSY01000003.1 GeneMarkS-2+ CDS 4252 5028 . - 0 ID=cds-WP_124724119.1;Parent=gene-FJM01_RS00180;Dbxref=GenBank:WP_124724119.1;Name=WP_124724119.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00180;product=DUF2779 domain-containing protein;protein_id=WP_124724119.1;transl_table=4 NZ_VFSY01000003.1 RefSeq gene 5079 5843 . + . ID=gene-FJM01_RS00185;Name=FJM01_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00185;old_locus_tag=FJM01_00185 NZ_VFSY01000003.1 GeneMarkS-2+ CDS 5079 5843 . + 0 ID=cds-WP_140700855.1;Parent=gene-FJM01_RS00185;Dbxref=GenBank:WP_140700855.1;Name=WP_140700855.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00185;product=hypothetical protein;protein_id=WP_140700855.1;transl_table=4 NZ_VFSY01000003.1 RefSeq gene 5933 6808 . + . ID=gene-FJM01_RS00190;Name=FJM01_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00190;old_locus_tag=FJM01_00190 NZ_VFSY01000003.1 Protein Homology CDS 5933 6808 . + 0 ID=cds-WP_124724121.1;Parent=gene-FJM01_RS00190;Dbxref=GenBank:WP_124724121.1;Name=WP_124724121.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046009.1;locus_tag=FJM01_RS00190;product=MAGa3780 family membrane protein;protein_id=WP_124724121.1;transl_table=4 NZ_VFSY01000003.1 RefSeq gene 6838 9579 . - . ID=gene-FJM01_RS00195;Name=FJM01_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00195;old_locus_tag=FJM01_00195 NZ_VFSY01000003.1 GeneMarkS-2+ CDS 6838 9579 . - 0 ID=cds-WP_140700856.1;Parent=gene-FJM01_RS00195;Dbxref=GenBank:WP_140700856.1;Name=WP_140700856.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00195;product=coiled-coil domain-containing protein;protein_id=WP_140700856.1;transl_table=4 NZ_VFSY01000003.1 RefSeq gene 9570 10226 . + . ID=gene-FJM01_RS00200;Name=FJM01_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00200;old_locus_tag=FJM01_00200 NZ_VFSY01000003.1 GeneMarkS-2+ CDS 9570 10226 . + 0 ID=cds-WP_140700857.1;Parent=gene-FJM01_RS00200;Dbxref=GenBank:WP_140700857.1;Name=WP_140700857.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00200;product=hypothetical protein;protein_id=WP_140700857.1;transl_table=4 NZ_VFSY01000003.1 RefSeq gene 10207 12417 . - . ID=gene-FJM01_RS00205;Name=FJM01_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00205;old_locus_tag=FJM01_00205 NZ_VFSY01000003.1 GeneMarkS-2+ CDS 10207 12417 . - 0 ID=cds-WP_140700858.1;Parent=gene-FJM01_RS00205;Dbxref=GenBank:WP_140700858.1;Name=WP_140700858.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00205;product=hypothetical protein;protein_id=WP_140700858.1;transl_table=4 NZ_VFSY01000003.1 RefSeq gene 12704 14059 . + . ID=gene-FJM01_RS00210;Name=FJM01_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00210;old_locus_tag=FJM01_00210 NZ_VFSY01000003.1 Protein Homology CDS 12704 14059 . + 0 ID=cds-WP_140700859.1;Parent=gene-FJM01_RS00210;Dbxref=GenBank:WP_140700859.1;Name=WP_140700859.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015709.7;locus_tag=FJM01_RS00210;product=HAD family acid phosphatase;protein_id=WP_140700859.1;transl_table=4 NZ_VFSY01000003.1 RefSeq gene 14120 14901 . - . ID=gene-FJM01_RS03205;Name=FJM01_RS03205;end_range=14901,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03205;partial=true NZ_VFSY01000003.1 GeneMarkS-2+ CDS 14120 14901 . - 2 ID=cds-WP_222400898.1;Parent=gene-FJM01_RS03205;Dbxref=GenBank:WP_222400898.1;Name=WP_222400898.1;end_range=14901,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03205;partial=true;product=hypothetical protein;protein_id=WP_222400898.1;transl_table=4 ##sequence-region NZ_VFSY01000020.1 1 63208 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=538220 NZ_VFSY01000020.1 RefSeq region 1 63208 . + . ID=NZ_VFSY01000020.1:1..63208;Dbxref=taxon:538220;collection-date=2006-08;country=South Africa: Oudtshoorn;gbkey=Src;genome=genomic;isolation-source=tracheal swab;mol_type=genomic DNA;nat-host=Struthio camelus;old-name=Mycoplasma sp. Ms01;strain=Ms01 NZ_VFSY01000020.1 RefSeq gene 377 1606 . - . ID=gene-FJM01_RS00725;Name=FJM01_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00725;old_locus_tag=FJM01_00725 NZ_VFSY01000020.1 Protein Homology CDS 377 1606 . - 0 ID=cds-WP_140700935.1;Parent=gene-FJM01_RS00725;Dbxref=GenBank:WP_140700935.1;Name=WP_140700935.1;Ontology_term=GO:0006812,GO:0055085,GO:1902600,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: protein motif:HMM:NF013188.7;locus_tag=FJM01_RS00725;product=cation:proton antiporter domain-containing protein;protein_id=WP_140700935.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 1756 2280 . + . ID=gene-FJM01_RS00730;Name=FJM01_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00730;old_locus_tag=FJM01_00730 NZ_VFSY01000020.1 GeneMarkS-2+ CDS 1756 2280 . + 0 ID=cds-WP_124724230.1;Parent=gene-FJM01_RS00730;Dbxref=GenBank:WP_124724230.1;Name=WP_124724230.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00730;product=hypothetical protein;protein_id=WP_124724230.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 2339 3085 . + . ID=gene-FJM01_RS03690;Name=FJM01_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03690 NZ_VFSY01000020.1 Protein Homology CDS 2339 3085 . + 0 ID=cds-WP_334199138.1;Parent=gene-FJM01_RS03690;Dbxref=GenBank:WP_334199138.1;Name=WP_334199138.1;Ontology_term=GO:0019264,GO:0004372;gbkey=CDS;go_function=glycine hydroxymethyltransferase activity|0004372||IEA;go_process=glycine biosynthetic process from L-serine|0019264||IEA;inference=COORDINATES: protein motif:HMM:NF000586.1;locus_tag=FJM01_RS03690;product=serine hydroxymethyltransferase;protein_id=WP_334199138.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 3057 3596 . + . ID=gene-FJM01_RS03695;Name=FJM01_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03695 NZ_VFSY01000020.1 Protein Homology CDS 3057 3596 . + 0 ID=cds-WP_334199139.1;Parent=gene-FJM01_RS03695;Dbxref=GenBank:WP_334199139.1;Name=WP_334199139.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012677.7;locus_tag=FJM01_RS03695;product=hypothetical protein;protein_id=WP_334199139.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 3599 3895 . + . ID=gene-FJM01_RS00740;Name=FJM01_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00740;old_locus_tag=FJM01_00740 NZ_VFSY01000020.1 GeneMarkS-2+ CDS 3599 3895 . + 0 ID=cds-WP_124724232.1;Parent=gene-FJM01_RS00740;Dbxref=GenBank:WP_124724232.1;Name=WP_124724232.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00740;product=hypothetical protein;protein_id=WP_124724232.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 3895 5538 . + . ID=gene-FJM01_RS00745;Name=FJM01_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00745;old_locus_tag=FJM01_00745 NZ_VFSY01000020.1 Protein Homology CDS 3895 5538 . + 0 ID=cds-WP_140700936.1;Parent=gene-FJM01_RS00745;Dbxref=GenBank:WP_140700936.1;Name=WP_140700936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054642.1;locus_tag=FJM01_RS00745;product=DAK2 domain-containing protein;protein_id=WP_140700936.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 5556 6533 . + . ID=gene-FJM01_RS00750;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=FJM01_RS00750;old_locus_tag=FJM01_00750 NZ_VFSY01000020.1 Protein Homology CDS 5556 6533 . + 0 ID=cds-WP_140700937.1;Parent=gene-FJM01_RS00750;Dbxref=GenBank:WP_140700937.1;Name=WP_140700937.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: protein motif:HMM:TIGR00182.1;locus_tag=FJM01_RS00750;product=phosphate acyltransferase PlsX;protein_id=WP_140700937.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 6536 7255 . + . ID=gene-FJM01_RS00755;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=FJM01_RS00755;old_locus_tag=FJM01_00755 NZ_VFSY01000020.1 Protein Homology CDS 6536 7255 . + 0 ID=cds-WP_140700938.1;Parent=gene-FJM01_RS00755;Dbxref=GenBank:WP_140700938.1;Name=WP_140700938.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: protein motif:HMM:TIGR02191.1;locus_tag=FJM01_RS00755;product=ribonuclease III;protein_id=WP_140700938.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 7337 8011 . + . ID=gene-FJM01_RS00760;Name=FJM01_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00760;old_locus_tag=FJM01_00760 NZ_VFSY01000020.1 Protein Homology CDS 7337 8011 . + 0 ID=cds-WP_124724236.1;Parent=gene-FJM01_RS00760;Dbxref=GenBank:WP_124724236.1;Name=WP_124724236.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF015347.7;locus_tag=FJM01_RS00760;product=BspA family leucine-rich repeat surface protein;protein_id=WP_124724236.1;transl_table=4 NZ_VFSY01000020.1 RefSeq pseudogene 8024 8497 . + . ID=gene-FJM01_RS00765;Name=FJM01_RS00765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=FJM01_RS00765;old_locus_tag=FJM01_00765;partial=true;pseudo=true;start_range=.,8024 NZ_VFSY01000020.1 Protein Homology CDS 8024 8497 . + 0 ID=cds-FJM01_RS00765;Parent=gene-FJM01_RS00765;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF015347.7;locus_tag=FJM01_RS00765;partial=true;product=BspA family leucine-rich repeat surface protein;pseudo=true;start_range=.,8024;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 9100 9471 . + . ID=gene-FJM01_RS03295;Name=FJM01_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03295 NZ_VFSY01000020.1 GeneMarkS-2+ CDS 9100 9471 . + 0 ID=cds-WP_222400906.1;Parent=gene-FJM01_RS03295;Dbxref=GenBank:WP_222400906.1;Name=WP_222400906.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS03295;product=BRO family protein;protein_id=WP_222400906.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 9428 9955 . + . ID=gene-FJM01_RS00770;Name=fic;gbkey=Gene;gene=fic;gene_biotype=protein_coding;locus_tag=FJM01_RS00770;old_locus_tag=FJM01_00770 NZ_VFSY01000020.1 Protein Homology CDS 9428 9955 . + 0 ID=cds-WP_222400907.1;Parent=gene-FJM01_RS00770;Dbxref=GenBank:WP_222400907.1;Name=WP_222400907.1;Ontology_term=GO:0018117,GO:0042803,GO:0070733;gbkey=CDS;gene=fic;go_function=protein homodimerization activity|0042803||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011387229.1;locus_tag=FJM01_RS00770;product=protein adenylyltransferase Fic;protein_id=WP_222400907.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 10206 10571 . + . ID=gene-FJM01_RS00775;Name=FJM01_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00775;old_locus_tag=FJM01_00775 NZ_VFSY01000020.1 GeneMarkS-2+ CDS 10206 10571 . + 0 ID=cds-WP_140700940.1;Parent=gene-FJM01_RS00775;Dbxref=GenBank:WP_140700940.1;Name=WP_140700940.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00775;product=hypothetical protein;protein_id=WP_140700940.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 10725 11942 . + . ID=gene-FJM01_RS00780;Name=FJM01_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00780;old_locus_tag=FJM01_00780 NZ_VFSY01000020.1 Protein Homology CDS 10725 11942 . + 0 ID=cds-WP_140700941.1;Parent=gene-FJM01_RS00780;Dbxref=GenBank:WP_140700941.1;Name=WP_140700941.1;Ontology_term=GO:0006304,GO:0003677,GO:0003886,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA (cytosine-5-)-methyltransferase activity|0003886||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:TIGR00675.1;locus_tag=FJM01_RS00780;product=DNA cytosine methyltransferase;protein_id=WP_140700941.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 11945 13468 . + . ID=gene-FJM01_RS00785;Name=FJM01_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00785;old_locus_tag=FJM01_00785 NZ_VFSY01000020.1 Protein Homology CDS 11945 13468 . + 0 ID=cds-WP_140700942.1;Parent=gene-FJM01_RS00785;Dbxref=GenBank:WP_140700942.1;Name=WP_140700942.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024977.7;locus_tag=FJM01_RS00785;product=ATP-binding protein;protein_id=WP_140700942.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 13461 15647 . + . ID=gene-FJM01_RS00790;Name=FJM01_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00790;old_locus_tag=FJM01_00790 NZ_VFSY01000020.1 Protein Homology CDS 13461 15647 . + 0 ID=cds-WP_186390749.1;Parent=gene-FJM01_RS00790;Dbxref=GenBank:WP_186390749.1;Name=WP_186390749.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022063.7;locus_tag=FJM01_RS00790;product=Z1 domain-containing protein;protein_id=WP_186390749.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 15637 16569 . + . ID=gene-FJM01_RS00795;Name=FJM01_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00795;old_locus_tag=FJM01_00795 NZ_VFSY01000020.1 Protein Homology CDS 15637 16569 . + 0 ID=cds-WP_140700944.1;Parent=gene-FJM01_RS00795;Dbxref=GenBank:WP_140700944.1;Name=WP_140700944.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025748.7;locus_tag=FJM01_RS00795;product=PD-(D/E)XK motif protein;protein_id=WP_140700944.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 16891 17100 . - . ID=gene-FJM01_RS00800;Name=FJM01_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00800;old_locus_tag=FJM01_00800 NZ_VFSY01000020.1 GeneMarkS-2+ CDS 16891 17100 . - 0 ID=cds-WP_140700945.1;Parent=gene-FJM01_RS00800;Dbxref=GenBank:WP_140700945.1;Name=WP_140700945.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00800;product=hypothetical protein;protein_id=WP_140700945.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 17111 18064 . - . ID=gene-FJM01_RS00805;Name=FJM01_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00805;old_locus_tag=FJM01_00805 NZ_VFSY01000020.1 Protein Homology CDS 17111 18064 . - 0 ID=cds-WP_140700946.1;Parent=gene-FJM01_RS00805;Dbxref=GenBank:WP_140700946.1;Name=WP_140700946.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF015347.7;locus_tag=FJM01_RS00805;product=BspA family leucine-rich repeat surface protein;protein_id=WP_140700946.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 18193 18576 . - . ID=gene-FJM01_RS00810;Name=FJM01_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00810;old_locus_tag=FJM01_00810 NZ_VFSY01000020.1 GeneMarkS-2+ CDS 18193 18576 . - 0 ID=cds-WP_140700947.1;Parent=gene-FJM01_RS00810;Dbxref=GenBank:WP_140700947.1;Name=WP_140700947.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00810;product=hypothetical protein;protein_id=WP_140700947.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 18803 19714 . + . ID=gene-FJM01_RS03390;Name=FJM01_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03390 NZ_VFSY01000020.1 Protein Homology CDS 18803 19714 . + 0 ID=cds-WP_261368941.1;Parent=gene-FJM01_RS03390;Dbxref=GenBank:WP_261368941.1;Name=WP_261368941.1;Ontology_term=GO:0006302,GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;go_process=double-strand break repair|0006302||IEA;inference=COORDINATES: protein motif:HMM:NF024573.7;locus_tag=FJM01_RS03390;product=AAA family ATPase;protein_id=WP_261368941.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 19677 21746 . + . ID=gene-FJM01_RS00815;Name=FJM01_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00815;old_locus_tag=FJM01_00815 NZ_VFSY01000020.1 Protein Homology CDS 19677 21746 . + 0 ID=cds-WP_261368942.1;Parent=gene-FJM01_RS00815;Dbxref=GenBank:WP_261368942.1;Name=WP_261368942.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014516.7;locus_tag=FJM01_RS00815;product=coiled-coil domain-containing protein;protein_id=WP_261368942.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 21938 22234 . + . ID=gene-FJM01_RS00820;Name=FJM01_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00820;old_locus_tag=FJM01_00820 NZ_VFSY01000020.1 GeneMarkS-2+ CDS 21938 22234 . + 0 ID=cds-WP_124724240.1;Parent=gene-FJM01_RS00820;Dbxref=GenBank:WP_124724240.1;Name=WP_124724240.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00820;product=virulence protein;protein_id=WP_124724240.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 22336 23196 . - . ID=gene-FJM01_RS00825;Name=FJM01_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00825;old_locus_tag=FJM01_00825 NZ_VFSY01000020.1 Protein Homology CDS 22336 23196 . - 0 ID=cds-WP_140700948.1;Parent=gene-FJM01_RS00825;Dbxref=GenBank:WP_140700948.1;Name=WP_140700948.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF024702.7;locus_tag=FJM01_RS00825;product=leucine-rich repeat domain-containing protein;protein_id=WP_140700948.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 23277 25175 . + . ID=gene-FJM01_RS00830;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=FJM01_RS00830;old_locus_tag=FJM01_00830 NZ_VFSY01000020.1 Protein Homology CDS 23277 25175 . + 0 ID=cds-WP_315850228.1;Parent=gene-FJM01_RS00830;Dbxref=GenBank:WP_315850228.1;Name=WP_315850228.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: protein motif:HMM:TIGR00631.1;locus_tag=FJM01_RS00830;product=excinuclease ABC subunit UvrB;protein_id=WP_315850228.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 25147 25245 . + . ID=gene-FJM01_RS03520;Name=FJM01_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03520 NZ_VFSY01000020.1 Protein Homology CDS 25147 25245 . + 0 ID=cds-WP_315850229.1;Parent=gene-FJM01_RS03520;Dbxref=GenBank:WP_315850229.1;Name=WP_315850229.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF014232.7;locus_tag=FJM01_RS03520;product=UvrB/UvrC motif-containing protein;protein_id=WP_315850229.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 25270 25992 . - . ID=gene-FJM01_RS00835;Name=FJM01_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00835;old_locus_tag=FJM01_00835 NZ_VFSY01000020.1 GeneMarkS-2+ CDS 25270 25992 . - 0 ID=cds-WP_140700949.1;Parent=gene-FJM01_RS00835;Dbxref=GenBank:WP_140700949.1;Name=WP_140700949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00835;product=AAA family ATPase;protein_id=WP_140700949.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 26373 28367 . - . ID=gene-FJM01_RS00840;Name=FJM01_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00840;old_locus_tag=FJM01_00840 NZ_VFSY01000020.1 Protein Homology CDS 26373 28367 . - 0 ID=cds-WP_124724245.1;Parent=gene-FJM01_RS00840;Dbxref=GenBank:WP_124724245.1;Name=WP_124724245.1;Ontology_term=GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: protein motif:HMM:NF045830.1;locus_tag=FJM01_RS00840;product=MYPU_1760 family metalloprotease;protein_id=WP_124724245.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 28425 28967 . + . ID=gene-FJM01_RS00845;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=FJM01_RS00845;old_locus_tag=FJM01_00845 NZ_VFSY01000020.1 Protein Homology CDS 28425 28967 . + 0 ID=cds-WP_124724246.1;Parent=gene-FJM01_RS00845;Dbxref=GenBank:WP_124724246.1;Name=WP_124724246.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: protein motif:HMM:TIGR00095.1;locus_tag=FJM01_RS00845;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_124724246.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 29022 29645 . + . ID=gene-FJM01_RS00850;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=FJM01_RS00850;old_locus_tag=FJM01_00850 NZ_VFSY01000020.1 Protein Homology CDS 29022 29645 . + 0 ID=cds-WP_140700950.1;Parent=gene-FJM01_RS00850;Dbxref=GenBank:WP_140700950.1;Name=WP_140700950.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: protein motif:HMM:NF012832.7;locus_tag=FJM01_RS00850;product=guanylate kinase;protein_id=WP_140700950.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 29649 30392 . + . ID=gene-FJM01_RS00855;Name=FJM01_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00855;old_locus_tag=FJM01_00855 NZ_VFSY01000020.1 Protein Homology CDS 29649 30392 . + 0 ID=cds-WP_245979690.1;Parent=gene-FJM01_RS00855;Dbxref=GenBank:WP_245979690.1;Name=WP_245979690.1;Ontology_term=GO:0006470,GO:0004722,GO:0046872;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA,metal ion binding|0046872||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: protein motif:HMM:NF025053.7;locus_tag=FJM01_RS00855;product=PP2C family protein-serine/threonine phosphatase;protein_id=WP_245979690.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 30479 31429 . + . ID=gene-FJM01_RS00860;Name=FJM01_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00860;old_locus_tag=FJM01_00860 NZ_VFSY01000020.1 Protein Homology CDS 30479 31429 . + 0 ID=cds-WP_261368945.1;Parent=gene-FJM01_RS00860;Dbxref=GenBank:WP_261368945.1;Name=WP_261368945.1;Ontology_term=GO:0004674,GO:0005524;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF012298.7;locus_tag=FJM01_RS00860;product=serine/threonine-protein kinase;protein_id=WP_261368945.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 31429 32277 . + . ID=gene-FJM01_RS00865;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=FJM01_RS00865;old_locus_tag=FJM01_00865 NZ_VFSY01000020.1 Protein Homology CDS 31429 32277 . + 0 ID=cds-WP_124724250.1;Parent=gene-FJM01_RS00865;Dbxref=GenBank:WP_124724250.1;Name=WP_124724250.1;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: protein motif:HMM:TIGR00157.1;locus_tag=FJM01_RS00865;product=ribosome small subunit-dependent GTPase A;protein_id=WP_124724250.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 32287 32928 . + . ID=gene-FJM01_RS00870;Name=FJM01_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00870;old_locus_tag=FJM01_00870 NZ_VFSY01000020.1 Protein Homology CDS 32287 32928 . + 0 ID=cds-WP_140700952.1;Parent=gene-FJM01_RS00870;Dbxref=GenBank:WP_140700952.1;Name=WP_140700952.1;Ontology_term=GO:0005975,GO:0006098,GO:0004750,GO:0016857,GO:0046872;gbkey=CDS;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA,racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: protein motif:HMM:NF004076.0;locus_tag=FJM01_RS00870;product=ribulose-phosphate 3-epimerase;protein_id=WP_140700952.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 33078 33359 . + . ID=gene-FJM01_RS00875;Name=FJM01_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00875;old_locus_tag=FJM01_00875 NZ_VFSY01000020.1 GeneMarkS-2+ CDS 33078 33359 . + 0 ID=cds-WP_140700953.1;Parent=gene-FJM01_RS00875;Dbxref=GenBank:WP_140700953.1;Name=WP_140700953.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00875;product=hypothetical protein;protein_id=WP_140700953.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 33419 34594 . + . ID=gene-FJM01_RS00880;Name=FJM01_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00880;old_locus_tag=FJM01_00880 NZ_VFSY01000020.1 GeneMarkS-2+ CDS 33419 34594 . + 0 ID=cds-WP_140700954.1;Parent=gene-FJM01_RS00880;Dbxref=GenBank:WP_140700954.1;Name=WP_140700954.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00880;product=hypothetical protein;protein_id=WP_140700954.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 34733 36526 . + . ID=gene-FJM01_RS00885;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=FJM01_RS00885;old_locus_tag=FJM01_00885 NZ_VFSY01000020.1 Protein Homology CDS 34733 36526 . + 0 ID=cds-WP_124724254.1;Parent=gene-FJM01_RS00885;Dbxref=GenBank:WP_124724254.1;Name=WP_124724254.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013609356.1;locus_tag=FJM01_RS00885;product=molecular chaperone DnaK;protein_id=WP_124724254.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 36677 38491 . + . ID=gene-FJM01_RS00890;Name=FJM01_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00890;old_locus_tag=FJM01_00890 NZ_VFSY01000020.1 Protein Homology CDS 36677 38491 . + 0 ID=cds-WP_140700955.1;Parent=gene-FJM01_RS00890;Dbxref=GenBank:WP_140700955.1;Name=WP_140700955.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013245.7;locus_tag=FJM01_RS00890;product=ABC transporter permease;protein_id=WP_140700955.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 38491 39195 . + . ID=gene-FJM01_RS00895;Name=FJM01_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00895;old_locus_tag=FJM01_00895 NZ_VFSY01000020.1 Protein Homology CDS 38491 39195 . + 0 ID=cds-WP_140700956.1;Parent=gene-FJM01_RS00895;Dbxref=GenBank:WP_140700956.1;Name=WP_140700956.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013448073.1;locus_tag=FJM01_RS00895;product=ABC transporter ATP-binding protein;protein_id=WP_140700956.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 39173 40168 . + . ID=gene-FJM01_RS00900;Name=FJM01_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00900;old_locus_tag=FJM01_00900 NZ_VFSY01000020.1 Protein Homology CDS 39173 40168 . + 0 ID=cds-WP_124724257.1;Parent=gene-FJM01_RS00900;Dbxref=GenBank:WP_124724257.1;Name=WP_124724257.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04313.1;locus_tag=FJM01_RS00900;product=aromatic motif membrane protein;protein_id=WP_124724257.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 40158 41009 . + . ID=gene-FJM01_RS00905;Name=FJM01_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00905;old_locus_tag=FJM01_00905 NZ_VFSY01000020.1 Protein Homology CDS 40158 41009 . + 0 ID=cds-WP_140700957.1;Parent=gene-FJM01_RS00905;Dbxref=GenBank:WP_140700957.1;Name=WP_140700957.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04313.1;locus_tag=FJM01_RS00905;product=aromatic motif membrane protein;protein_id=WP_140700957.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 41063 41902 . + . ID=gene-FJM01_RS03660;Name=FJM01_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03660 NZ_VFSY01000020.1 Protein Homology CDS 41063 41902 . + 0 ID=cds-WP_416371551.1;Parent=gene-FJM01_RS03660;Dbxref=GenBank:WP_416371551.1;Name=WP_416371551.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04313.1;locus_tag=FJM01_RS03660;product=aromatic motif membrane protein;protein_id=WP_416371551.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 42009 43034 . + . ID=gene-FJM01_RS03405;Name=FJM01_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS03405 NZ_VFSY01000020.1 Protein Homology CDS 42009 43034 . + 0 ID=cds-WP_261368944.1;Parent=gene-FJM01_RS03405;Dbxref=GenBank:WP_261368944.1;Name=WP_261368944.1;Ontology_term=GO:0097190,GO:0001540,GO:0004930;gbkey=CDS;go_function=amyloid-beta binding|0001540||IEA,G protein-coupled receptor activity|0004930||IEA;go_process=apoptotic signaling pathway|0097190||IEA;inference=COORDINATES: protein motif:HMM:NF017007.7;locus_tag=FJM01_RS03405;product=TM2 domain-containing protein;protein_id=WP_261368944.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 43093 43554 . - . ID=gene-FJM01_RS00925;Name=FJM01_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00925;old_locus_tag=FJM01_00925 NZ_VFSY01000020.1 Protein Homology CDS 43093 43554 . - 0 ID=cds-WP_140700959.1;Parent=gene-FJM01_RS00925;Dbxref=GenBank:WP_140700959.1;Name=WP_140700959.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF024583.7;locus_tag=FJM01_RS00925;product=GAF domain-containing protein;protein_id=WP_140700959.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 43746 44606 . + . ID=gene-FJM01_RS00930;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=FJM01_RS00930;old_locus_tag=FJM01_00930 NZ_VFSY01000020.1 Protein Homology CDS 43746 44606 . + 0 ID=cds-WP_124724261.1;Parent=gene-FJM01_RS00930;Dbxref=GenBank:WP_124724261.1;Name=WP_124724261.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054335.1;locus_tag=FJM01_RS00930;product=30S ribosomal protein S2;protein_id=WP_124724261.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 44645 45511 . + . ID=gene-FJM01_RS00935;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=FJM01_RS00935;old_locus_tag=FJM01_00935 NZ_VFSY01000020.1 Protein Homology CDS 44645 45511 . + 0 ID=cds-WP_140700960.1;Parent=gene-FJM01_RS00935;Dbxref=GenBank:WP_140700960.1;Name=WP_140700960.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: protein motif:HMM:TIGR00116.1;locus_tag=FJM01_RS00935;product=translation elongation factor Ts;protein_id=WP_140700960.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 45584 46399 . + . ID=gene-FJM01_RS00940;Name=FJM01_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00940;old_locus_tag=FJM01_00940 NZ_VFSY01000020.1 Protein Homology CDS 45584 46399 . + 0 ID=cds-WP_124724263.1;Parent=gene-FJM01_RS00940;Dbxref=GenBank:WP_124724263.1;Name=WP_124724263.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:TIGR00099.1;locus_tag=FJM01_RS00940;product=HAD family hydrolase;protein_id=WP_124724263.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 46445 47389 . + . ID=gene-FJM01_RS00945;Name=FJM01_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00945;old_locus_tag=FJM01_00945 NZ_VFSY01000020.1 Protein Homology CDS 46445 47389 . + 0 ID=cds-WP_140700961.1;Parent=gene-FJM01_RS00945;Dbxref=GenBank:WP_140700961.1;Name=WP_140700961.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033817.2;locus_tag=FJM01_RS00945;product=variable surface lipoprotein;protein_id=WP_140700961.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 47426 48307 . - . ID=gene-FJM01_RS00950;Name=FJM01_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00950;old_locus_tag=FJM01_00950 NZ_VFSY01000020.1 Protein Homology CDS 47426 48307 . - 0 ID=cds-WP_140700962.1;Parent=gene-FJM01_RS00950;Dbxref=GenBank:WP_140700962.1;Name=WP_140700962.1;Ontology_term=GO:0003677,GO:0008409;gbkey=CDS;go_function=DNA binding|0003677||IEA,5'-3' exonuclease activity|0008409||IEA;inference=COORDINATES: protein motif:HMM:NF014759.7;locus_tag=FJM01_RS00950;product=5'-3' exonuclease;protein_id=WP_140700962.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 48307 51282 . - . ID=gene-FJM01_RS00955;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=FJM01_RS00955;old_locus_tag=FJM01_00955 NZ_VFSY01000020.1 Protein Homology CDS 48307 51282 . - 0 ID=cds-WP_140700963.1;Parent=gene-FJM01_RS00955;Dbxref=GenBank:WP_140700963.1;Name=WP_140700963.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408,GO:0009360;gbkey=CDS;gene=dnaE;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:TIGR00594.1;locus_tag=FJM01_RS00955;product=DNA polymerase III subunit alpha;protein_id=WP_140700963.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 51598 52485 . + . ID=gene-FJM01_RS00960;Name=FJM01_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00960;old_locus_tag=FJM01_00960 NZ_VFSY01000020.1 Protein Homology CDS 51598 52485 . + 0 ID=cds-WP_124724267.1;Parent=gene-FJM01_RS00960;Dbxref=GenBank:WP_124724267.1;Name=WP_124724267.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF052737.1;locus_tag=FJM01_RS00960;product=DnaD domain protein;protein_id=WP_124724267.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 52495 53418 . + . ID=gene-FJM01_RS00965;Name=FJM01_RS00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00965;old_locus_tag=FJM01_00965 NZ_VFSY01000020.1 GeneMarkS-2+ CDS 52495 53418 . + 0 ID=cds-WP_124724268.1;Parent=gene-FJM01_RS00965;Dbxref=GenBank:WP_124724268.1;Name=WP_124724268.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS00965;product=hypothetical protein;protein_id=WP_124724268.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 53485 53559 . + . ID=gene-FJM01_RS00970;Name=FJM01_RS00970;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS00970;old_locus_tag=FJM01_00970 NZ_VFSY01000020.1 tRNAscan-SE tRNA 53485 53559 . + . ID=rna-FJM01_RS00970;Parent=gene-FJM01_RS00970;anticodon=(pos:53518..53520);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS00970;product=tRNA-Cys NZ_VFSY01000020.1 tRNAscan-SE exon 53485 53559 . + . ID=exon-FJM01_RS00970-1;Parent=rna-FJM01_RS00970;anticodon=(pos:53518..53520);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS00970;product=tRNA-Cys NZ_VFSY01000020.1 RefSeq gene 53565 53641 . + . ID=gene-FJM01_RS00975;Name=FJM01_RS00975;gbkey=Gene;gene_biotype=tRNA;locus_tag=FJM01_RS00975;old_locus_tag=FJM01_00975 NZ_VFSY01000020.1 tRNAscan-SE tRNA 53565 53641 . + . ID=rna-FJM01_RS00975;Parent=gene-FJM01_RS00975;anticodon=(pos:53599..53601);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS00975;product=tRNA-Arg NZ_VFSY01000020.1 tRNAscan-SE exon 53565 53641 . + . ID=exon-FJM01_RS00975-1;Parent=rna-FJM01_RS00975;anticodon=(pos:53599..53601);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=FJM01_RS00975;product=tRNA-Arg NZ_VFSY01000020.1 RefSeq gene 53761 54786 . + . ID=gene-FJM01_RS00980;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=FJM01_RS00980;old_locus_tag=FJM01_00980 NZ_VFSY01000020.1 Protein Homology CDS 53761 54786 . + 0 ID=cds-WP_140700964.1;Parent=gene-FJM01_RS00980;Dbxref=GenBank:WP_140700964.1;Name=WP_140700964.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:TIGR00331.1;locus_tag=FJM01_RS00980;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_140700964.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 54779 55597 . + . ID=gene-FJM01_RS00985;Name=FJM01_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00985;old_locus_tag=FJM01_00985 NZ_VFSY01000020.1 Protein Homology CDS 54779 55597 . + 0 ID=cds-WP_186390751.1;Parent=gene-FJM01_RS00985;Dbxref=GenBank:WP_186390751.1;Name=WP_186390751.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: protein motif:HMM:NF013212.7;locus_tag=FJM01_RS00985;product=nucleotide exchange factor GrpE;protein_id=WP_186390751.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 55659 58136 . + . ID=gene-FJM01_RS00990;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=FJM01_RS00990;old_locus_tag=FJM01_00990 NZ_VFSY01000020.1 Protein Homology CDS 55659 58136 . + 0 ID=cds-WP_140700966.1;Parent=gene-FJM01_RS00990;Dbxref=GenBank:WP_140700966.1;Name=WP_140700966.1;Ontology_term=GO:0006508,GO:0004252,GO:0005524,GO:0016887;gbkey=CDS;gene=lon;go_function=serine-type endopeptidase activity|0004252||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:TIGR00763.1;locus_tag=FJM01_RS00990;product=endopeptidase La;protein_id=WP_140700966.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 58211 59677 . + . ID=gene-FJM01_RS00995;Name=FJM01_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS00995;old_locus_tag=FJM01_00995 NZ_VFSY01000020.1 Protein Homology CDS 58211 59677 . + 0 ID=cds-WP_140700967.1;Parent=gene-FJM01_RS00995;Dbxref=GenBank:WP_140700967.1;Name=WP_140700967.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013860.7;locus_tag=FJM01_RS00995;product=DUF31 family putative serine protease;protein_id=WP_140700967.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 59637 60728 . + . ID=gene-FJM01_RS01000;Name=FJM01_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01000;old_locus_tag=FJM01_01000 NZ_VFSY01000020.1 Protein Homology CDS 59637 60728 . + 0 ID=cds-WP_222400908.1;Parent=gene-FJM01_RS01000;Dbxref=GenBank:WP_222400908.1;Name=WP_222400908.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013860.7;locus_tag=FJM01_RS01000;product=DUF31 family protein;protein_id=WP_222400908.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 60725 61204 . - . ID=gene-FJM01_RS01005;Name=FJM01_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01005;old_locus_tag=FJM01_01005 NZ_VFSY01000020.1 Protein Homology CDS 60725 61204 . - 0 ID=cds-WP_140700969.1;Parent=gene-FJM01_RS01005;Dbxref=GenBank:WP_140700969.1;Name=WP_140700969.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015347.7;locus_tag=FJM01_RS01005;product=BspA family leucine-rich repeat surface protein;protein_id=WP_140700969.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 61188 62258 . - . ID=gene-FJM01_RS01010;Name=FJM01_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01010;old_locus_tag=FJM01_01010 NZ_VFSY01000020.1 GeneMarkS-2+ CDS 61188 62258 . - 0 ID=cds-WP_140700970.1;Parent=gene-FJM01_RS01010;Dbxref=GenBank:WP_140700970.1;Name=WP_140700970.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01010;product=BspA family leucine-rich repeat surface protein;protein_id=WP_140700970.1;transl_table=4 NZ_VFSY01000020.1 RefSeq gene 62418 63035 . - . ID=gene-FJM01_RS01015;Name=FJM01_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=FJM01_RS01015;old_locus_tag=FJM01_01015 NZ_VFSY01000020.1 GeneMarkS-2+ CDS 62418 63035 . - 0 ID=cds-WP_140700971.1;Parent=gene-FJM01_RS01015;Dbxref=GenBank:WP_140700971.1;Name=WP_140700971.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=FJM01_RS01015;product=hypothetical protein;protein_id=WP_140700971.1;transl_table=4 ###