##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM3001402v1 #!genome-build-accession NCBI_Assembly:GCA_030014025.1 #!annotation-date 02/27/2023 12:51:18 #!annotation-source NCBI ##sequence-region CP118825.1 1 2229055 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1290 CP118825.1 Genbank region 1 2229055 . + . ID=CP118825.1:1..2229055;Dbxref=taxon:1290;Is_circular=true;Name=ANONYMOUS;collection-date=2022-06-06;country=Algeria: Ouargla;gbkey=Src;genome=chromosome;isolation-source=Nose;mol_type=genomic DNA;nat-host=Camelus dromedarius;strain=7056 CP118825.1 Genbank gene 1 1353 . + . ID=gene-PYH62_00005;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=PYH62_00005 CP118825.1 Protein Homology CDS 1 1353 . + 0 ID=cds-WHI79283.1;Parent=gene-PYH62_00005;Dbxref=NCBI_GP:WHI79283.1;Name=WHI79283.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898446.1;locus_tag=PYH62_00005;product=chromosomal replication initiator protein DnaA;protein_id=WHI79283.1;transl_table=11 CP118825.1 Genbank gene 1643 2776 . + . ID=gene-PYH62_00010;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=PYH62_00010 CP118825.1 Protein Homology CDS 1643 2776 . + 0 ID=cds-WHI80282.1;Parent=gene-PYH62_00010;Dbxref=NCBI_GP:WHI80282.1;Name=WHI80282.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000969809.1;locus_tag=PYH62_00010;product=DNA polymerase III subunit beta;protein_id=WHI80282.1;transl_table=11 CP118825.1 Genbank gene 3136 3378 . + . ID=gene-PYH62_00015;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=PYH62_00015 CP118825.1 Protein Homology CDS 3136 3378 . + 0 ID=cds-WHI79284.1;Parent=gene-PYH62_00015;Dbxref=NCBI_GP:WHI79284.1;Name=WHI79284.1;Ontology_term=GO:0003723;gbkey=CDS;gene=yaaA;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498611.1;locus_tag=PYH62_00015;product=S4 domain-containing protein YaaA;protein_id=WHI79284.1;transl_table=11 CP118825.1 Genbank gene 3375 4490 . + . ID=gene-PYH62_00020;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=PYH62_00020 CP118825.1 Protein Homology CDS 3375 4490 . + 0 ID=cds-WHI79285.1;Parent=gene-PYH62_00020;Dbxref=NCBI_GP:WHI79285.1;Name=WHI79285.1;Ontology_term=GO:0006281,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498612.1;locus_tag=PYH62_00020;product=DNA replication/repair protein RecF;protein_id=WHI79285.1;transl_table=11 CP118825.1 Genbank pseudogene 4500 6435 . + . ID=gene-PYH62_00025;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=pseudogene;locus_tag=PYH62_00025;pseudo=true CP118825.1 Protein Homology CDS 4500 6435 . + 0 ID=cds-PYH62_00025;Parent=gene-PYH62_00025;Note=frameshifted;Ontology_term=GO:0006265,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrB;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498613.1;locus_tag=PYH62_00025;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;pseudo=true;transl_table=11 CP118825.1 Genbank gene 6477 9131 . + . ID=gene-PYH62_00030;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=PYH62_00030 CP118825.1 Protein Homology CDS 6477 9131 . + 0 ID=cds-WHI79286.1;Parent=gene-PYH62_00030;Dbxref=NCBI_GP:WHI79286.1;Name=WHI79286.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175620.1;locus_tag=PYH62_00030;product=DNA gyrase subunit A;protein_id=WHI79286.1;transl_table=11 CP118825.1 Genbank gene 9180 9992 . - . ID=gene-PYH62_00035;Name=PYH62_00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00035 CP118825.1 Protein Homology CDS 9180 9992 . - 0 ID=cds-WHI79287.1;Parent=gene-PYH62_00035;Dbxref=NCBI_GP:WHI79287.1;Name=WHI79287.1;Ontology_term=GO:0052855;gbkey=CDS;go_function=ADP-dependent NAD(P)H-hydrate dehydratase activity|0052855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454556.1;locus_tag=PYH62_00035;product=NAD(P)H-hydrate dehydratase;protein_id=WHI79287.1;transl_table=11 CP118825.1 cmsearch binding_site 10263 10466 . + . ID=id-CP118825.1:10263..10466;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.4 CP118825.1 Genbank gene 10542 11825 . + . ID=gene-PYH62_00040;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=PYH62_00040 CP118825.1 Protein Homology CDS 10542 11825 . + 0 ID=cds-WHI79288.1;Parent=gene-PYH62_00040;Dbxref=NCBI_GP:WHI79288.1;Name=WHI79288.1;Ontology_term=GO:0006434,GO:0004828,GO:0005737;gbkey=CDS;gene=serS;go_component=cytoplasm|0005737||IEA;go_function=serine-tRNA ligase activity|0004828||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488451.1;locus_tag=PYH62_00040;product=serine--tRNA ligase;protein_id=WHI79288.1;transl_table=11 CP118825.1 Genbank gene 12113 12808 . + . ID=gene-PYH62_00045;Name=PYH62_00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00045 CP118825.1 Protein Homology CDS 12113 12808 . + 0 ID=cds-WHI79289.1;Parent=gene-PYH62_00045;Dbxref=NCBI_GP:WHI79289.1;Name=WHI79289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488460.1;locus_tag=PYH62_00045;product=AzlC family ABC transporter permease;protein_id=WHI79289.1;transl_table=11 CP118825.1 Genbank gene 12805 13134 . + . ID=gene-PYH62_00050;Name=PYH62_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00050 CP118825.1 Protein Homology CDS 12805 13134 . + 0 ID=cds-WHI79290.1;Parent=gene-PYH62_00050;Dbxref=NCBI_GP:WHI79290.1;Name=WHI79290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834692.1;locus_tag=PYH62_00050;product=AzlD domain-containing protein;protein_id=WHI79290.1;transl_table=11 CP118825.1 cmsearch riboswitch 13220 13320 . + . ID=id-CP118825.1:13220..13320;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch CP118825.1 Genbank gene 13392 14360 . + . ID=gene-PYH62_00055;Name=PYH62_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00055 CP118825.1 Protein Homology CDS 13392 14360 . + 0 ID=cds-WHI79291.1;Parent=gene-PYH62_00055;Dbxref=NCBI_GP:WHI79291.1;Name=WHI79291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498620.1;locus_tag=PYH62_00055;product=alpha/beta fold hydrolase family protein;protein_id=WHI79291.1;transl_table=11 CP118825.1 Genbank gene 14450 15361 . + . ID=gene-PYH62_00060;Name=PYH62_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00060 CP118825.1 Protein Homology CDS 14450 15361 . + 0 ID=cds-WHI79292.1;Parent=gene-PYH62_00060;Dbxref=NCBI_GP:WHI79292.1;Name=WHI79292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501610.1;locus_tag=PYH62_00060;product=DUF2232 domain-containing protein;protein_id=WHI79292.1;transl_table=11 CP118825.1 Genbank gene 15389 17356 . + . ID=gene-PYH62_00065;Name=PYH62_00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00065 CP118825.1 Protein Homology CDS 15389 17356 . + 0 ID=cds-WHI79293.1;Parent=gene-PYH62_00065;Dbxref=NCBI_GP:WHI79293.1;Name=WHI79293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834690.1;locus_tag=PYH62_00065;product=DHH family phosphoesterase;protein_id=WHI79293.1;transl_table=11 CP118825.1 Genbank gene 17353 17799 . + . ID=gene-PYH62_00070;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=PYH62_00070 CP118825.1 Protein Homology CDS 17353 17799 . + 0 ID=cds-WHI79294.1;Parent=gene-PYH62_00070;Dbxref=NCBI_GP:WHI79294.1;Name=WHI79294.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplI;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498623.1;locus_tag=PYH62_00070;product=50S ribosomal protein L9;protein_id=WHI79294.1;transl_table=11 CP118825.1 Genbank pseudogene 17908 19309 . + . ID=gene-PYH62_00075;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=pseudogene;locus_tag=PYH62_00075;pseudo=true CP118825.1 Protein Homology CDS 17908 19309 . + 0 ID=cds-PYH62_00075;Parent=gene-PYH62_00075;Note=frameshifted;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831779.1;locus_tag=PYH62_00075;product=replicative DNA helicase;pseudo=true;transl_table=11 CP118825.1 Genbank pseudogene 19589 20873 . + . ID=gene-PYH62_00080;Name=PYH62_00080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_00080;pseudo=true CP118825.1 Protein Homology CDS 19589 20873 . + 0 ID=cds-PYH62_00080;Parent=gene-PYH62_00080;Note=frameshifted;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498625.1;locus_tag=PYH62_00080;product=adenylosuccinate synthase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 21264 21338 . + . ID=gene-PYH62_00085;Name=PYH62_00085;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_00085 CP118825.1 tRNAscan-SE tRNA 21264 21338 . + . ID=rna-PYH62_00085;Parent=gene-PYH62_00085;anticodon=(pos:21297..21299);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_00085;product=tRNA-Glu CP118825.1 tRNAscan-SE exon 21264 21338 . + . ID=exon-PYH62_00085-1;Parent=rna-PYH62_00085;anticodon=(pos:21297..21299);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_00085;product=tRNA-Glu CP118825.1 Genbank gene 21344 21416 . + . ID=gene-PYH62_00090;Name=PYH62_00090;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_00090 CP118825.1 tRNAscan-SE tRNA 21344 21416 . + . ID=rna-PYH62_00090;Parent=gene-PYH62_00090;anticodon=(pos:21377..21379);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_00090;product=tRNA-Asp CP118825.1 tRNAscan-SE exon 21344 21416 . + . ID=exon-PYH62_00090-1;Parent=rna-PYH62_00090;anticodon=(pos:21377..21379);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_00090;product=tRNA-Asp CP118825.1 Genbank gene 21905 22606 . + . ID=gene-PYH62_00095;Name=yycF;gbkey=Gene;gene=yycF;gene_biotype=protein_coding;locus_tag=PYH62_00095 CP118825.1 Protein Homology CDS 21905 22606 . + 0 ID=cds-WHI79295.1;Parent=gene-PYH62_00095;Dbxref=NCBI_GP:WHI79295.1;Name=WHI79295.1;gbkey=CDS;gene=yycF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498626.1;locus_tag=PYH62_00095;product=response regulator YycF;protein_id=WHI79295.1;transl_table=11 CP118825.1 Genbank gene 22619 24445 . + . ID=gene-PYH62_00100;Name=walK;gbkey=Gene;gene=walK;gene_biotype=protein_coding;locus_tag=PYH62_00100 CP118825.1 Protein Homology CDS 22619 24445 . + 0 ID=cds-WHI79296.1;Parent=gene-PYH62_00100;Dbxref=NCBI_GP:WHI79296.1;Name=WHI79296.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=walK;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274376.1;locus_tag=PYH62_00100;product=cell wall metabolism sensor histidine kinase WalK;protein_id=WHI79296.1;transl_table=11 CP118825.1 Genbank gene 24435 25766 . + . ID=gene-PYH62_00105;Name=yycH;gbkey=Gene;gene=yycH;gene_biotype=protein_coding;locus_tag=PYH62_00105 CP118825.1 Protein Homology CDS 24435 25766 . + 0 ID=cds-WHI79297.1;Parent=gene-PYH62_00105;Dbxref=NCBI_GP:WHI79297.1;Name=WHI79297.1;gbkey=CDS;gene=yycH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001060131.1;locus_tag=PYH62_00105;product=two-component system activity regulator YycH;protein_id=WHI79297.1;transl_table=11 CP118825.1 Genbank gene 25767 26558 . + . ID=gene-PYH62_00110;Name=yycI;gbkey=Gene;gene=yycI;gene_biotype=protein_coding;locus_tag=PYH62_00110 CP118825.1 Protein Homology CDS 25767 26558 . + 0 ID=cds-WHI79298.1;Parent=gene-PYH62_00110;Dbxref=NCBI_GP:WHI79298.1;Name=WHI79298.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yycI;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001104166.1;locus_tag=PYH62_00110;product=two-component system regulatory protein YycI;protein_id=WHI79298.1;transl_table=11 CP118825.1 Genbank gene 26833 27615 . + . ID=gene-PYH62_00115;Name=PYH62_00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00115 CP118825.1 Protein Homology CDS 26833 27615 . + 0 ID=cds-WHI80215.1;Parent=gene-PYH62_00115;Dbxref=NCBI_GP:WHI80215.1;Name=WHI80215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014533143.1;locus_tag=PYH62_00115;product=MBL fold metallo-hydrolase;protein_id=WHI80215.1;transl_table=11 CP118825.1 Genbank gene 28036 28515 . + . ID=gene-PYH62_00120;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=PYH62_00120 CP118825.1 Protein Homology CDS 28036 28515 . + 0 ID=cds-WHI79299.1;Parent=gene-PYH62_00120;Dbxref=NCBI_GP:WHI79299.1;Name=WHI79299.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363758.1;locus_tag=PYH62_00120;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WHI79299.1;transl_table=11 CP118825.1 Genbank gene 28621 31413 . + . ID=gene-PYH62_00125;Name=PYH62_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00125 CP118825.1 Protein Homology CDS 28621 31413 . + 0 ID=cds-WHI79300.1;Parent=gene-PYH62_00125;Dbxref=NCBI_GP:WHI79300.1;Name=WHI79300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489617.1;locus_tag=PYH62_00125;product=type I restriction endonuclease subunit R;protein_id=WHI79300.1;transl_table=11 CP118825.1 Genbank gene 31503 32084 . + . ID=gene-PYH62_00130;Name=PYH62_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00130 CP118825.1 Protein Homology CDS 31503 32084 . + 0 ID=cds-WHI79301.1;Parent=gene-PYH62_00130;Dbxref=NCBI_GP:WHI79301.1;Name=WHI79301.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458507.1;locus_tag=PYH62_00130;product=restriction endonuclease subunit S;protein_id=WHI79301.1;transl_table=11 CP118825.1 Genbank pseudogene 32085 33642 . + . ID=gene-PYH62_00135;Name=PYH62_00135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_00135;pseudo=true CP118825.1 Protein Homology CDS 32085 33642 . + 0 ID=cds-PYH62_00135;Parent=gene-PYH62_00135;Note=frameshifted;Ontology_term=GO:0006306,GO:0009307,GO:0009007,GO:0015666;gbkey=CDS;go_function=site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA,restriction endodeoxyribonuclease activity|0015666||IEA;go_process=DNA methylation|0006306||IEA,DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469809.1;locus_tag=PYH62_00135;product=type I restriction-modification system subunit M;pseudo=true;transl_table=11 CP118825.1 Genbank gene 33635 34882 . + . ID=gene-PYH62_00140;Name=PYH62_00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00140 CP118825.1 Protein Homology CDS 33635 34882 . + 0 ID=cds-WHI79302.1;Parent=gene-PYH62_00140;Dbxref=NCBI_GP:WHI79302.1;Name=WHI79302.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.2;locus_tag=PYH62_00140;product=restriction endonuclease subunit S;protein_id=WHI79302.1;transl_table=11 CP118825.1 Genbank gene 35192 35689 . - . ID=gene-PYH62_00145;Name=PYH62_00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00145 CP118825.1 Protein Homology CDS 35192 35689 . - 0 ID=cds-WHI79303.1;Parent=gene-PYH62_00145;Dbxref=NCBI_GP:WHI79303.1;Name=WHI79303.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012656763.1;locus_tag=PYH62_00145;product=GNAT family N-acetyltransferase;protein_id=WHI79303.1;transl_table=11 CP118825.1 Genbank gene 36567 36959 . - . ID=gene-PYH62_00150;Name=PYH62_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00150 CP118825.1 GeneMarkS-2+ CDS 36567 36959 . - 0 ID=cds-WHI79304.1;Parent=gene-PYH62_00150;Dbxref=NCBI_GP:WHI79304.1;Name=WHI79304.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_00150;product=recombinase family protein;protein_id=WHI79304.1;transl_table=11 CP118825.1 Genbank gene 37383 38276 . - . ID=gene-PYH62_00155;Name=PYH62_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00155 CP118825.1 Protein Homology CDS 37383 38276 . - 0 ID=cds-WHI79305.1;Parent=gene-PYH62_00155;Dbxref=NCBI_GP:WHI79305.1;Name=WHI79305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486184.1;locus_tag=PYH62_00155;product=hypothetical protein;protein_id=WHI79305.1;transl_table=11 CP118825.1 Genbank gene 38421 38642 . - . ID=gene-PYH62_00160;Name=PYH62_00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00160 CP118825.1 Protein Homology CDS 38421 38642 . - 0 ID=cds-WHI79306.1;Parent=gene-PYH62_00160;Dbxref=NCBI_GP:WHI79306.1;Name=WHI79306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434137.1;locus_tag=PYH62_00160;product=hypothetical protein;protein_id=WHI79306.1;transl_table=11 CP118825.1 Genbank gene 38657 39166 . - . ID=gene-PYH62_00165;Name=PYH62_00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00165 CP118825.1 Protein Homology CDS 38657 39166 . - 0 ID=cds-WHI79307.1;Parent=gene-PYH62_00165;Dbxref=NCBI_GP:WHI79307.1;Name=WHI79307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012086592.1;locus_tag=PYH62_00165;product=DUF1643 domain-containing protein;protein_id=WHI79307.1;transl_table=11 CP118825.1 Genbank gene 39182 39493 . - . ID=gene-PYH62_00170;Name=PYH62_00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00170 CP118825.1 Protein Homology CDS 39182 39493 . - 0 ID=cds-WHI79308.1;Parent=gene-PYH62_00170;Dbxref=NCBI_GP:WHI79308.1;Name=WHI79308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505017.1;locus_tag=PYH62_00170;product=DUF960 family protein;protein_id=WHI79308.1;transl_table=11 CP118825.1 Genbank gene 39580 39930 . - . ID=gene-PYH62_00175;Name=PYH62_00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00175 CP118825.1 Protein Homology CDS 39580 39930 . - 0 ID=cds-WHI79309.1;Parent=gene-PYH62_00175;Dbxref=NCBI_GP:WHI79309.1;Name=WHI79309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502216.1;locus_tag=PYH62_00175;product=SAUGI family uracil-DNA glycosylase inhibitor;protein_id=WHI79309.1;transl_table=11 CP118825.1 Genbank gene 40398 42023 . - . ID=gene-PYH62_00180;Name=PYH62_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00180 CP118825.1 Protein Homology CDS 40398 42023 . - 0 ID=cds-WHI79310.1;Parent=gene-PYH62_00180;Dbxref=NCBI_GP:WHI79310.1;Name=WHI79310.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001186610.1;locus_tag=PYH62_00180;product=recombinase family protein;protein_id=WHI79310.1;transl_table=11 CP118825.1 Genbank pseudogene 42045 43396 . - . ID=gene-PYH62_00185;Name=PYH62_00185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_00185;pseudo=true CP118825.1 Protein Homology CDS 42045 43396 . - 0 ID=cds-PYH62_00185;Parent=gene-PYH62_00185;Note=frameshifted;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486190.1;locus_tag=PYH62_00185;product=recombinase family protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 43584 45353 . - . ID=gene-PYH62_00190;Name=PYH62_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00190 CP118825.1 Protein Homology CDS 43584 45353 . - 0 ID=cds-WHI79311.1;Parent=gene-PYH62_00190;Dbxref=NCBI_GP:WHI79311.1;Name=WHI79311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176075.1;locus_tag=PYH62_00190;product=DUF927 domain-containing protein;protein_id=WHI79311.1;transl_table=11 CP118825.1 Genbank gene 45353 45649 . - . ID=gene-PYH62_00195;Name=PYH62_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00195 CP118825.1 Protein Homology CDS 45353 45649 . - 0 ID=cds-WHI79312.1;Parent=gene-PYH62_00195;Dbxref=NCBI_GP:WHI79312.1;Name=WHI79312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000273824.1;locus_tag=PYH62_00195;product=single-stranded DNA-binding protein;protein_id=WHI79312.1;transl_table=11 CP118825.1 Genbank gene 45822 47336 . - . ID=gene-PYH62_00200;Name=PYH62_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00200 CP118825.1 Protein Homology CDS 45822 47336 . - 0 ID=cds-WHI79313.1;Parent=gene-PYH62_00200;Dbxref=NCBI_GP:WHI79313.1;Name=WHI79313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000594571.1;locus_tag=PYH62_00200;product=hypothetical protein;protein_id=WHI79313.1;transl_table=11 CP118825.1 Genbank gene 47481 48185 . + . ID=gene-PYH62_00205;Name=PYH62_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00205 CP118825.1 Protein Homology CDS 47481 48185 . + 0 ID=cds-WHI79314.1;Parent=gene-PYH62_00205;Dbxref=NCBI_GP:WHI79314.1;Name=WHI79314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016170663.1;locus_tag=PYH62_00205;product=FRG domain-containing protein;protein_id=WHI79314.1;transl_table=11 CP118825.1 Genbank gene 48209 49051 . + . ID=gene-PYH62_00210;Name=PYH62_00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00210 CP118825.1 Protein Homology CDS 48209 49051 . + 0 ID=cds-WHI79315.1;Parent=gene-PYH62_00210;Dbxref=NCBI_GP:WHI79315.1;Name=WHI79315.1;Ontology_term=GO:0007165,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000114516.1;locus_tag=PYH62_00210;product=TIR domain-containing protein;protein_id=WHI79315.1;transl_table=11 CP118825.1 Genbank gene 49525 49803 . + . ID=gene-PYH62_00215;Name=PYH62_00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00215 CP118825.1 GeneMarkS-2+ CDS 49525 49803 . + 0 ID=cds-WHI79316.1;Parent=gene-PYH62_00215;Dbxref=NCBI_GP:WHI79316.1;Name=WHI79316.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_00215;product=hypothetical protein;protein_id=WHI79316.1;transl_table=11 CP118825.1 Genbank gene 49913 50071 . + . ID=gene-PYH62_00220;Name=PYH62_00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00220 CP118825.1 GeneMarkS-2+ CDS 49913 50071 . + 0 ID=cds-WHI79317.1;Parent=gene-PYH62_00220;Dbxref=NCBI_GP:WHI79317.1;Name=WHI79317.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_00220;product=hypothetical protein;protein_id=WHI79317.1;transl_table=11 CP118825.1 Genbank gene 50389 51027 . + . ID=gene-PYH62_00225;Name=PYH62_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00225 CP118825.1 Protein Homology CDS 50389 51027 . + 0 ID=cds-WHI79318.1;Parent=gene-PYH62_00225;Dbxref=NCBI_GP:WHI79318.1;Name=WHI79318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001033157.1;locus_tag=PYH62_00225;product=fusidic acid resistance EF-G-binding protein FusC;protein_id=WHI79318.1;transl_table=11 CP118825.1 Genbank gene 51713 52342 . + . ID=gene-PYH62_00230;Name=PYH62_00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00230 CP118825.1 Protein Homology CDS 51713 52342 . + 0 ID=cds-WHI79319.1;Parent=gene-PYH62_00230;Dbxref=NCBI_GP:WHI79319.1;Name=WHI79319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494594.1;locus_tag=PYH62_00230;product=hypothetical protein;protein_id=WHI79319.1;transl_table=11 CP118825.1 Genbank gene 53021 53449 . - . ID=gene-PYH62_00235;Name=PYH62_00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00235 CP118825.1 Protein Homology CDS 53021 53449 . - 0 ID=cds-WHI79320.1;Parent=gene-PYH62_00235;Dbxref=NCBI_GP:WHI79320.1;Name=WHI79320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001011132.1;locus_tag=PYH62_00235;product=VOC family protein;protein_id=WHI79320.1;transl_table=11 CP118825.1 Genbank gene 53529 54458 . + . ID=gene-PYH62_00240;Name=PYH62_00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00240 CP118825.1 Protein Homology CDS 53529 54458 . + 0 ID=cds-WHI79321.1;Parent=gene-PYH62_00240;Dbxref=NCBI_GP:WHI79321.1;Name=WHI79321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000750311.1;locus_tag=PYH62_00240;product=HTH domain-containing protein;protein_id=WHI79321.1;transl_table=11 CP118825.1 Genbank pseudogene 54690 55213 . - . ID=gene-PYH62_00245;Name=PYH62_00245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_00245;pseudo=true CP118825.1 Protein Homology CDS 54690 55213 . - 0 ID=cds-PYH62_00245;Parent=gene-PYH62_00245;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494449.1;locus_tag=PYH62_00245;product=transposase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 55286 55960 . + . ID=gene-PYH62_00250;Name=PYH62_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00250 CP118825.1 Protein Homology CDS 55286 55960 . + 0 ID=cds-WHI79322.1;Parent=gene-PYH62_00250;Dbxref=NCBI_GP:WHI79322.1;Name=WHI79322.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=PYH62_00250;product=IS6-like element IS257 family transposase;protein_id=WHI79322.1;transl_table=11 CP118825.1 Genbank pseudogene 56019 56450 . - . ID=gene-PYH62_00255;Name=PYH62_00255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_00255;pseudo=true CP118825.1 Protein Homology CDS 56019 56450 . - 0 ID=cds-PYH62_00255;Parent=gene-PYH62_00255;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012087791.1;locus_tag=PYH62_00255;product=MMPL family transporter;pseudo=true;transl_table=11 CP118825.1 Genbank gene 56889 57779 . - . ID=gene-PYH62_00260;Name=PYH62_00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00260 CP118825.1 Protein Homology CDS 56889 57779 . - 0 ID=cds-WHI79323.1;Parent=gene-PYH62_00260;Dbxref=NCBI_GP:WHI79323.1;Name=WHI79323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174749.1;locus_tag=PYH62_00260;product=LysR family transcriptional regulator;protein_id=WHI79323.1;transl_table=11 CP118825.1 Genbank gene 57910 59094 . + . ID=gene-PYH62_00265;Name=PYH62_00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00265 CP118825.1 Protein Homology CDS 57910 59094 . + 0 ID=cds-WHI79324.1;Parent=gene-PYH62_00265;Dbxref=NCBI_GP:WHI79324.1;Name=WHI79324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174748.1;locus_tag=PYH62_00265;product=MFS transporter;protein_id=WHI79324.1;transl_table=11 CP118825.1 Genbank gene 59214 60608 . - . ID=gene-PYH62_00270;Name=PYH62_00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00270 CP118825.1 Protein Homology CDS 59214 60608 . - 0 ID=cds-WHI79325.1;Parent=gene-PYH62_00270;Dbxref=NCBI_GP:WHI79325.1;Name=WHI79325.1;Ontology_term=GO:1902604,GO:0015558;gbkey=CDS;go_function=secondary active p-aminobenzoyl-glutamate transmembrane transporter activity|0015558||IEA;go_process=p-aminobenzoyl-glutamate transmembrane transport|1902604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454629.1;locus_tag=PYH62_00270;product=AbgT family transporter;protein_id=WHI79325.1;transl_table=11 CP118825.1 Genbank pseudogene 60786 62074 . - . ID=gene-PYH62_00275;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=pseudogene;locus_tag=PYH62_00275;pseudo=true CP118825.1 Protein Homology CDS 60786 62074 . - 0 ID=cds-PYH62_00275;Parent=gene-PYH62_00275;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;gene=arsB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174746.1;locus_tag=PYH62_00275;product=arsenite efflux transporter membrane subunit ArsB;pseudo=true;transl_table=11 CP118825.1 Genbank gene 62260 63135 . - . ID=gene-PYH62_00280;Name=PYH62_00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00280 CP118825.1 Protein Homology CDS 62260 63135 . - 0 ID=cds-WHI79326.1;Parent=gene-PYH62_00280;Dbxref=NCBI_GP:WHI79326.1;Name=WHI79326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174745.1;locus_tag=PYH62_00280;product=hypothetical protein;protein_id=WHI79326.1;transl_table=11 CP118825.1 Genbank gene 63340 64011 . + . ID=gene-PYH62_00285;Name=PYH62_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00285 CP118825.1 Protein Homology CDS 63340 64011 . + 0 ID=cds-WHI79327.1;Parent=gene-PYH62_00285;Dbxref=NCBI_GP:WHI79327.1;Name=WHI79327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454626.1;locus_tag=PYH62_00285;product=M15 family metallopeptidase;protein_id=WHI79327.1;transl_table=11 CP118825.1 Genbank gene 64116 64925 . - . ID=gene-PYH62_00290;Name=PYH62_00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00290 CP118825.1 Protein Homology CDS 64116 64925 . - 0 ID=cds-WHI79328.1;Parent=gene-PYH62_00290;Dbxref=NCBI_GP:WHI79328.1;Name=WHI79328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174743.1;locus_tag=PYH62_00290;product=lysophospholipase;protein_id=WHI79328.1;transl_table=11 CP118825.1 Genbank gene 65161 65544 . - . ID=gene-PYH62_00295;Name=PYH62_00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00295 CP118825.1 Protein Homology CDS 65161 65544 . - 0 ID=cds-WHI79329.1;Parent=gene-PYH62_00295;Dbxref=NCBI_GP:WHI79329.1;Name=WHI79329.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449536.1;locus_tag=PYH62_00295;product=aspartate 1-decarboxylase;protein_id=WHI79329.1;transl_table=11 CP118825.1 Genbank gene 65550 66401 . - . ID=gene-PYH62_00300;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=PYH62_00300 CP118825.1 Protein Homology CDS 65550 66401 . - 0 ID=cds-WHI79330.1;Parent=gene-PYH62_00300;Dbxref=NCBI_GP:WHI79330.1;Name=WHI79330.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001618501.1;locus_tag=PYH62_00300;product=pantoate--beta-alanine ligase;protein_id=WHI79330.1;transl_table=11 CP118825.1 Genbank pseudogene 66385 67211 . - . ID=gene-PYH62_00305;Name=panB;gbkey=Gene;gene=panB;gene_biotype=pseudogene;locus_tag=PYH62_00305;pseudo=true CP118825.1 Protein Homology CDS 66385 67211 . - 0 ID=cds-PYH62_00305;Parent=gene-PYH62_00305;Note=frameshifted;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449348.1;locus_tag=PYH62_00305;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 67294 68148 . + . ID=gene-PYH62_00310;Name=PYH62_00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00310 CP118825.1 Protein Homology CDS 67294 68148 . + 0 ID=cds-WHI79331.1;Parent=gene-PYH62_00310;Dbxref=NCBI_GP:WHI79331.1;Name=WHI79331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454623.1;locus_tag=PYH62_00310;product=oxidoreductase;protein_id=WHI79331.1;transl_table=11 CP118825.1 Genbank gene 68267 69142 . + . ID=gene-PYH62_00315;Name=PYH62_00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00315 CP118825.1 Protein Homology CDS 68267 69142 . + 0 ID=cds-WHI79332.1;Parent=gene-PYH62_00315;Dbxref=NCBI_GP:WHI79332.1;Name=WHI79332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174739.1;locus_tag=PYH62_00315;product=hypothetical protein;protein_id=WHI79332.1;transl_table=11 CP118825.1 Genbank gene 69169 70074 . - . ID=gene-PYH62_00320;Name=PYH62_00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00320 CP118825.1 Protein Homology CDS 69169 70074 . - 0 ID=cds-WHI79333.1;Parent=gene-PYH62_00320;Dbxref=NCBI_GP:WHI79333.1;Name=WHI79333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477347.1;locus_tag=PYH62_00320;product=hypothetical protein;protein_id=WHI79333.1;transl_table=11 CP118825.1 Genbank gene 70196 71068 . - . ID=gene-PYH62_00325;Name=PYH62_00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00325 CP118825.1 Protein Homology CDS 70196 71068 . - 0 ID=cds-WHI79334.1;Parent=gene-PYH62_00325;Dbxref=NCBI_GP:WHI79334.1;Name=WHI79334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174737.1;locus_tag=PYH62_00325;product=serine protease;protein_id=WHI79334.1;transl_table=11 CP118825.1 Genbank gene 71287 71377 . + . ID=gene-PYH62_00330;Name=PYH62_00330;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_00330 CP118825.1 tRNAscan-SE tRNA 71287 71377 . + . ID=rna-PYH62_00330;Parent=gene-PYH62_00330;anticodon=(pos:71324..71326);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_00330;product=tRNA-Lys CP118825.1 tRNAscan-SE exon 71287 71377 . + . ID=exon-PYH62_00330-1;Parent=rna-PYH62_00330;anticodon=(pos:71324..71326);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_00330;product=tRNA-Lys CP118825.1 Genbank gene 71530 73041 . + . ID=gene-PYH62_00335;Name=PYH62_00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00335 CP118825.1 Protein Homology CDS 71530 73041 . + 0 ID=cds-WHI79335.1;Parent=gene-PYH62_00335;Dbxref=NCBI_GP:WHI79335.1;Name=WHI79335.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174736.1;locus_tag=PYH62_00335;product=MFS transporter;protein_id=WHI79335.1;transl_table=11 CP118825.1 Genbank gene 73435 73572 . + . ID=gene-PYH62_00340;Name=PYH62_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00340 CP118825.1 Protein Homology CDS 73435 73572 . + 0 ID=cds-WHI79336.1;Parent=gene-PYH62_00340;Dbxref=NCBI_GP:WHI79336.1;Name=WHI79336.1;Note=The YSIRK form of extended signal peptide directs nascent proteins to the cross-wall site%2C while signal peptides lacking YSIRK direct proteins instead to the cell pole. A large fraction of YSIRK proteins are surface proteins anchored by sortase-mediated processing of a C-terminal LPXTG motif.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01168.1;locus_tag=PYH62_00340;product=YSIRK-type signal peptide-containing protein;protein_id=WHI79336.1;transl_table=11 CP118825.1 Genbank gene 73559 75703 . + . ID=gene-PYH62_00345;Name=PYH62_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00345 CP118825.1 Protein Homology CDS 73559 75703 . + 0 ID=cds-WHI79337.1;Parent=gene-PYH62_00345;Dbxref=NCBI_GP:WHI79337.1;Name=WHI79337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464509.1;locus_tag=PYH62_00345;product=lipase;protein_id=WHI79337.1;transl_table=11 CP118825.1 Genbank gene 75920 76213 . - . ID=gene-PYH62_00350;Name=PYH62_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00350 CP118825.1 Protein Homology CDS 75920 76213 . - 0 ID=cds-WHI79338.1;Parent=gene-PYH62_00350;Dbxref=NCBI_GP:WHI79338.1;Name=WHI79338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449192.1;locus_tag=PYH62_00350;product=hypothetical protein;protein_id=WHI79338.1;transl_table=11 CP118825.1 Genbank gene 76340 76873 . - . ID=gene-PYH62_00355;Name=PYH62_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00355 CP118825.1 Protein Homology CDS 76340 76873 . - 0 ID=cds-WHI79339.1;Parent=gene-PYH62_00355;Dbxref=NCBI_GP:WHI79339.1;Name=WHI79339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454618.1;locus_tag=PYH62_00355;product=VOC family protein;protein_id=WHI79339.1;transl_table=11 CP118825.1 Genbank gene 77070 79079 . - . ID=gene-PYH62_00360;Name=PYH62_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00360 CP118825.1 Protein Homology CDS 77070 79079 . - 0 ID=cds-WHI79340.1;Parent=gene-PYH62_00360;Dbxref=NCBI_GP:WHI79340.1;Name=WHI79340.1;Ontology_term=GO:0004096,GO:0020037;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174733.1;locus_tag=PYH62_00360;product=catalase;protein_id=WHI79340.1;transl_table=11 CP118825.1 Genbank gene 79288 79908 . - . ID=gene-PYH62_00365;Name=PYH62_00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00365 CP118825.1 Protein Homology CDS 79288 79908 . - 0 ID=cds-WHI79341.1;Parent=gene-PYH62_00365;Dbxref=NCBI_GP:WHI79341.1;Name=WHI79341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449496.1;locus_tag=PYH62_00365;product=nitroreductase family protein;protein_id=WHI79341.1;transl_table=11 CP118825.1 Genbank gene 80216 81592 . + . ID=gene-PYH62_00370;Name=PYH62_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00370 CP118825.1 Protein Homology CDS 80216 81592 . + 0 ID=cds-WHI79342.1;Parent=gene-PYH62_00370;Dbxref=NCBI_GP:WHI79342.1;Name=WHI79342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449176.1;locus_tag=PYH62_00370;product=amino acid permease;protein_id=WHI79342.1;transl_table=11 CP118825.1 Genbank gene 81672 82973 . - . ID=gene-PYH62_00375;Name=PYH62_00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00375 CP118825.1 Protein Homology CDS 81672 82973 . - 0 ID=cds-WHI79343.1;Parent=gene-PYH62_00375;Dbxref=NCBI_GP:WHI79343.1;Name=WHI79343.1;Note=This protein belongs to a clade of FMN-dependent monooxygenases%2C within a broader family of flavin-dependent oxidoreductases%2C the luciferase-like monooxygenase (LMM) family%2C some of whose members use coenzyme F420 rather than FMN.;Ontology_term=GO:0008152,GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449452.1;locus_tag=PYH62_00375;product=NtaA/DmoA family FMN-dependent monooxygenase;protein_id=WHI79343.1;transl_table=11 CP118825.1 Genbank gene 83069 84103 . - . ID=gene-PYH62_00380;Name=mcrC;gbkey=Gene;gene=mcrC;gene_biotype=protein_coding;locus_tag=PYH62_00380 CP118825.1 Protein Homology CDS 83069 84103 . - 0 ID=cds-WHI79344.1;Parent=gene-PYH62_00380;Dbxref=NCBI_GP:WHI79344.1;Name=WHI79344.1;Ontology_term=GO:0009307;gbkey=CDS;gene=mcrC;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449326.1;locus_tag=PYH62_00380;product=5-methylcytosine-specific restriction endonuclease system specificity protein McrC;protein_id=WHI79344.1;transl_table=11 CP118825.1 Genbank gene 84100 86220 . - . ID=gene-PYH62_00385;Name=PYH62_00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00385 CP118825.1 Protein Homology CDS 84100 86220 . - 0 ID=cds-WHI79345.1;Parent=gene-PYH62_00385;Dbxref=NCBI_GP:WHI79345.1;Name=WHI79345.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454614.1;locus_tag=PYH62_00385;product=AAA family ATPase;protein_id=WHI79345.1;transl_table=11 CP118825.1 Genbank gene 86357 87715 . - . ID=gene-PYH62_00390;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=PYH62_00390 CP118825.1 Protein Homology CDS 86357 87715 . - 0 ID=cds-WHI79346.1;Parent=gene-PYH62_00390;Dbxref=NCBI_GP:WHI79346.1;Name=WHI79346.1;Ontology_term=GO:0015803,GO:0015658;gbkey=CDS;gene=brnQ;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174728.1;locus_tag=PYH62_00390;product=branched-chain amino acid transport system II carrier protein;protein_id=WHI79346.1;transl_table=11 CP118825.1 Genbank gene 87930 88154 . - . ID=gene-PYH62_00395;Name=PYH62_00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00395 CP118825.1 Protein Homology CDS 87930 88154 . - 0 ID=cds-WHI79347.1;Parent=gene-PYH62_00395;Dbxref=NCBI_GP:WHI79347.1;Name=WHI79347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830485.1;locus_tag=PYH62_00395;product=hypothetical protein;protein_id=WHI79347.1;transl_table=11 CP118825.1 Genbank gene 88340 89332 . - . ID=gene-PYH62_00400;Name=PYH62_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00400 CP118825.1 Protein Homology CDS 88340 89332 . - 0 ID=cds-WHI79348.1;Parent=gene-PYH62_00400;Dbxref=NCBI_GP:WHI79348.1;Name=WHI79348.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174727.1;locus_tag=PYH62_00400;product=zinc ABC transporter substrate-binding protein;protein_id=WHI79348.1;transl_table=11 CP118825.1 Genbank gene 89559 89699 . + . ID=gene-PYH62_00405;Name=PYH62_00405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00405 CP118825.1 GeneMarkS-2+ CDS 89559 89699 . + 0 ID=cds-WHI79349.1;Parent=gene-PYH62_00405;Dbxref=NCBI_GP:WHI79349.1;Name=WHI79349.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_00405;product=hypothetical protein;protein_id=WHI79349.1;transl_table=11 CP118825.1 Genbank pseudogene 89886 91434 . + . ID=gene-PYH62_00410;Name=PYH62_00410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_00410;pseudo=true CP118825.1 Protein Homology CDS 89886 91434 . + 0 ID=cds-PYH62_00410;Parent=gene-PYH62_00410;Note=frameshifted;Ontology_term=GO:0006820,GO:0008509,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=monoatomic anion transmembrane transporter activity|0008509||IEA;go_process=monoatomic anion transport|0006820||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505661.1;locus_tag=PYH62_00410;product=DASS family sodium-coupled anion symporter;pseudo=true;transl_table=11 CP118825.1 Genbank gene 91474 91872 . + . ID=gene-PYH62_00415;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=PYH62_00415 CP118825.1 Protein Homology CDS 91474 91872 . + 0 ID=cds-WHI79350.1;Parent=gene-PYH62_00415;Dbxref=NCBI_GP:WHI79350.1;Name=WHI79350.1;Ontology_term=GO:0030612;gbkey=CDS;gene=arsC;go_function=arsenate reductase (thioredoxin) activity|0030612||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500395.1;locus_tag=PYH62_00415;product=arsenate reductase (thioredoxin);protein_id=WHI79350.1;transl_table=11 CP118825.1 Genbank gene 91933 92133 . - . ID=gene-PYH62_00420;Name=PYH62_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00420 CP118825.1 Protein Homology CDS 91933 92133 . - 0 ID=cds-WHI79351.1;Parent=gene-PYH62_00420;Dbxref=NCBI_GP:WHI79351.1;Name=WHI79351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449526.1;locus_tag=PYH62_00420;product=hypothetical protein;protein_id=WHI79351.1;transl_table=11 CP118825.1 Genbank gene 92328 93197 . - . ID=gene-PYH62_00425;Name=PYH62_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00425 CP118825.1 Protein Homology CDS 92328 93197 . - 0 ID=cds-WHI80216.1;Parent=gene-PYH62_00425;Dbxref=NCBI_GP:WHI80216.1;Name=WHI80216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479237.1;locus_tag=PYH62_00425;product=mechanosensitive ion channel family protein;protein_id=WHI80216.1;transl_table=11 CP118825.1 Genbank gene 93394 93906 . - . ID=gene-PYH62_00430;Name=PYH62_00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00430 CP118825.1 Protein Homology CDS 93394 93906 . - 0 ID=cds-WHI79352.1;Parent=gene-PYH62_00430;Dbxref=NCBI_GP:WHI79352.1;Name=WHI79352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454607.1;locus_tag=PYH62_00430;product=universal stress protein;protein_id=WHI79352.1;transl_table=11 CP118825.1 Genbank gene 93992 94459 . - . ID=gene-PYH62_00435;Name=PYH62_00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00435 CP118825.1 Protein Homology CDS 93992 94459 . - 0 ID=cds-WHI79353.1;Parent=gene-PYH62_00435;Dbxref=NCBI_GP:WHI79353.1;Name=WHI79353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454606.1;locus_tag=PYH62_00435;product=hypothetical protein;protein_id=WHI79353.1;transl_table=11 CP118825.1 Genbank gene 94648 94980 . + . ID=gene-PYH62_00440;Name=PYH62_00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00440 CP118825.1 Protein Homology CDS 94648 94980 . + 0 ID=cds-WHI79354.1;Parent=gene-PYH62_00440;Dbxref=NCBI_GP:WHI79354.1;Name=WHI79354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174720.1;locus_tag=PYH62_00440;product=hypothetical protein;protein_id=WHI79354.1;transl_table=11 CP118825.1 Genbank gene 95301 96500 . - . ID=gene-PYH62_00445;Name=PYH62_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00445 CP118825.1 Protein Homology CDS 95301 96500 . - 0 ID=cds-WHI79355.1;Parent=gene-PYH62_00445;Dbxref=NCBI_GP:WHI79355.1;Name=WHI79355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488506.1;locus_tag=PYH62_00445;product=GTP-binding protein;protein_id=WHI79355.1;transl_table=11 CP118825.1 Genbank gene 96787 98148 . - . ID=gene-PYH62_00450;Name=PYH62_00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00450 CP118825.1 Protein Homology CDS 96787 98148 . - 0 ID=cds-WHI79356.1;Parent=gene-PYH62_00450;Dbxref=NCBI_GP:WHI79356.1;Name=WHI79356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469141.1;locus_tag=PYH62_00450;product=SLC45 family MFS transporter;protein_id=WHI79356.1;transl_table=11 CP118825.1 Genbank gene 98566 99972 . + . ID=gene-PYH62_00455;Name=PYH62_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00455 CP118825.1 Protein Homology CDS 98566 99972 . + 0 ID=cds-WHI79357.1;Parent=gene-PYH62_00455;Dbxref=NCBI_GP:WHI79357.1;Name=WHI79357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449263.1;locus_tag=PYH62_00455;product=glycosyltransferase family 2 protein;protein_id=WHI79357.1;transl_table=11 CP118825.1 Genbank gene 100277 100477 . + . ID=gene-PYH62_00460;Name=PYH62_00460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00460 CP118825.1 Protein Homology CDS 100277 100477 . + 0 ID=cds-WHI79358.1;Parent=gene-PYH62_00460;Dbxref=NCBI_GP:WHI79358.1;Name=WHI79358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001059082.1;locus_tag=PYH62_00460;product=cold-shock protein;protein_id=WHI79358.1;transl_table=11 CP118825.1 Genbank gene 100487 100729 . - . ID=gene-PYH62_00465;Name=PYH62_00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00465 CP118825.1 Protein Homology CDS 100487 100729 . - 0 ID=cds-WHI79359.1;Parent=gene-PYH62_00465;Dbxref=NCBI_GP:WHI79359.1;Name=WHI79359.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012655.2;locus_tag=PYH62_00465;product=TetR/AcrR family transcriptional regulator;protein_id=WHI79359.1;transl_table=11 CP118825.1 Genbank gene 100878 101606 . + . ID=gene-PYH62_00470;Name=PYH62_00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00470 CP118825.1 Protein Homology CDS 100878 101606 . + 0 ID=cds-WHI79360.1;Parent=gene-PYH62_00470;Dbxref=NCBI_GP:WHI79360.1;Name=WHI79360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174714.1;locus_tag=PYH62_00470;product=ABC transporter ATP-binding protein;protein_id=WHI79360.1;transl_table=11 CP118825.1 Genbank gene 101603 102688 . + . ID=gene-PYH62_00475;Name=PYH62_00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00475 CP118825.1 Protein Homology CDS 101603 102688 . + 0 ID=cds-WHI79361.1;Parent=gene-PYH62_00475;Dbxref=NCBI_GP:WHI79361.1;Name=WHI79361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000696075.1;locus_tag=PYH62_00475;product=ABC transporter permease;protein_id=WHI79361.1;transl_table=11 CP118825.1 Genbank gene 102962 103909 . + . ID=gene-PYH62_00480;Name=PYH62_00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00480 CP118825.1 Protein Homology CDS 102962 103909 . + 0 ID=cds-WHI79362.1;Parent=gene-PYH62_00480;Dbxref=NCBI_GP:WHI79362.1;Name=WHI79362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174712.1;locus_tag=PYH62_00480;product=2-dehydropantoate 2-reductase;protein_id=WHI79362.1;transl_table=11 CP118825.1 Genbank gene 103977 105656 . - . ID=gene-PYH62_00485;Name=PYH62_00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00485 CP118825.1 Protein Homology CDS 103977 105656 . - 0 ID=cds-WHI79363.1;Parent=gene-PYH62_00485;Dbxref=NCBI_GP:WHI79363.1;Name=WHI79363.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830915.1;locus_tag=PYH62_00485;product=IS1182 family transposase;protein_id=WHI79363.1;transl_table=11 CP118825.1 Genbank gene 107063 108988 . - . ID=gene-PYH62_00490;Name=PYH62_00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00490 CP118825.1 Protein Homology CDS 107063 108988 . - 0 ID=cds-WHI79364.1;Parent=gene-PYH62_00490;Dbxref=NCBI_GP:WHI79364.1;Name=WHI79364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175150.1;locus_tag=PYH62_00490;product=heavy metal translocating P-type ATPase;protein_id=WHI79364.1;transl_table=11 CP118825.1 Genbank gene 109318 109644 . - . ID=gene-PYH62_00495;Name=PYH62_00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00495 CP118825.1 Protein Homology CDS 109318 109644 . - 0 ID=cds-WHI79365.1;Parent=gene-PYH62_00495;Dbxref=NCBI_GP:WHI79365.1;Name=WHI79365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000391495.1;locus_tag=PYH62_00495;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WHI79365.1;transl_table=11 CP118825.1 Genbank gene 109851 110210 . + . ID=gene-PYH62_00500;Name=PYH62_00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00500 CP118825.1 Protein Homology CDS 109851 110210 . + 0 ID=cds-WHI79366.1;Parent=gene-PYH62_00500;Dbxref=NCBI_GP:WHI79366.1;Name=WHI79366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175149.1;locus_tag=PYH62_00500;product=hypothetical protein;protein_id=WHI79366.1;transl_table=11 CP118825.1 Genbank pseudogene 110322 110661 . - . ID=gene-PYH62_00505;Name=PYH62_00505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_00505;pseudo=true CP118825.1 Protein Homology CDS 110322 110661 . - 0 ID=cds-PYH62_00505;Parent=gene-PYH62_00505;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000815654.1;locus_tag=PYH62_00505;product=recombinase family protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 110685 111299 . + . ID=gene-PYH62_00510;Name=PYH62_00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00510 CP118825.1 Protein Homology CDS 110685 111299 . + 0 ID=cds-WHI79367.1;Parent=gene-PYH62_00510;Dbxref=NCBI_GP:WHI79367.1;Name=WHI79367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175147.1;locus_tag=PYH62_00510;product=hypothetical protein;protein_id=WHI79367.1;transl_table=11 CP118825.1 Genbank gene 111486 112847 . + . ID=gene-PYH62_00515;Name=PYH62_00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00515 CP118825.1 Protein Homology CDS 111486 112847 . + 0 ID=cds-WHI79368.1;Parent=gene-PYH62_00515;Dbxref=NCBI_GP:WHI79368.1;Name=WHI79368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501909.1;locus_tag=PYH62_00515;product=recombinase family protein;protein_id=WHI79368.1;transl_table=11 CP118825.1 Genbank gene 112844 114472 . + . ID=gene-PYH62_00520;Name=PYH62_00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00520 CP118825.1 Protein Homology CDS 112844 114472 . + 0 ID=cds-WHI79369.1;Parent=gene-PYH62_00520;Dbxref=NCBI_GP:WHI79369.1;Name=WHI79369.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485718.1;locus_tag=PYH62_00520;product=recombinase family protein;protein_id=WHI79369.1;transl_table=11 CP118825.1 Genbank gene 114975 115325 . + . ID=gene-PYH62_00525;Name=PYH62_00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00525 CP118825.1 Protein Homology CDS 114975 115325 . + 0 ID=cds-WHI79370.1;Parent=gene-PYH62_00525;Dbxref=NCBI_GP:WHI79370.1;Name=WHI79370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502216.1;locus_tag=PYH62_00525;product=SAUGI family uracil-DNA glycosylase inhibitor;protein_id=WHI79370.1;transl_table=11 CP118825.1 Genbank gene 115412 115726 . + . ID=gene-PYH62_00530;Name=PYH62_00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00530 CP118825.1 Protein Homology CDS 115412 115726 . + 0 ID=cds-WHI79371.1;Parent=gene-PYH62_00530;Dbxref=NCBI_GP:WHI79371.1;Name=WHI79371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505017.1;locus_tag=PYH62_00530;product=DUF960 family protein;protein_id=WHI79371.1;transl_table=11 CP118825.1 Genbank gene 115742 116245 . + . ID=gene-PYH62_00535;Name=PYH62_00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00535 CP118825.1 Protein Homology CDS 115742 116245 . + 0 ID=cds-WHI79372.1;Parent=gene-PYH62_00535;Dbxref=NCBI_GP:WHI79372.1;Name=WHI79372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012086592.1;locus_tag=PYH62_00535;product=DUF1643 domain-containing protein;protein_id=WHI79372.1;transl_table=11 CP118825.1 Genbank gene 116260 116481 . + . ID=gene-PYH62_00540;Name=PYH62_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00540 CP118825.1 Protein Homology CDS 116260 116481 . + 0 ID=cds-WHI79373.1;Parent=gene-PYH62_00540;Dbxref=NCBI_GP:WHI79373.1;Name=WHI79373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832432.1;locus_tag=PYH62_00540;product=hypothetical protein;protein_id=WHI79373.1;transl_table=11 CP118825.1 Genbank pseudogene 116588 117561 . - . ID=gene-PYH62_00545;Name=PYH62_00545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_00545;pseudo=true CP118825.1 Protein Homology CDS 116588 117561 . - 0 ID=cds-PYH62_00545;Parent=gene-PYH62_00545;Note=frameshifted;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000072592.1;locus_tag=PYH62_00545;product=restriction endonuclease subunit S;pseudo=true;transl_table=11 CP118825.1 Genbank gene 117543 117782 . - . ID=gene-PYH62_00550;Name=PYH62_00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00550 CP118825.1 GeneMarkS-2+ CDS 117543 117782 . - 0 ID=cds-WHI79374.1;Parent=gene-PYH62_00550;Dbxref=NCBI_GP:WHI79374.1;Name=WHI79374.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_00550;product=hypothetical protein;protein_id=WHI79374.1;transl_table=11 CP118825.1 Genbank gene 117775 117918 . - . ID=gene-PYH62_00555;Name=PYH62_00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00555 CP118825.1 GeneMarkS-2+ CDS 117775 117918 . - 0 ID=cds-WHI79375.1;Parent=gene-PYH62_00555;Dbxref=NCBI_GP:WHI79375.1;Name=WHI79375.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_00555;product=hypothetical protein;protein_id=WHI79375.1;transl_table=11 CP118825.1 Genbank gene 118144 118818 . - . ID=gene-PYH62_00560;Name=PYH62_00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00560 CP118825.1 Protein Homology CDS 118144 118818 . - 0 ID=cds-WHI79376.1;Parent=gene-PYH62_00560;Dbxref=NCBI_GP:WHI79376.1;Name=WHI79376.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=PYH62_00560;product=IS6-like element IS257 family transposase;protein_id=WHI79376.1;transl_table=11 CP118825.1 Genbank pseudogene 118876 119247 . - . ID=gene-PYH62_00565;Name=PYH62_00565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_00565;pseudo=true CP118825.1 Protein Homology CDS 118876 119247 . - 0 ID=cds-PYH62_00565;Parent=gene-PYH62_00565;Note=incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006260,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001611915.1;locus_tag=PYH62_00565;product=protein rep;pseudo=true;transl_table=11 CP118825.1 Genbank gene 119492 120754 . - . ID=gene-PYH62_00570;Name=mobV;gbkey=Gene;gene=mobV;gene_biotype=protein_coding;locus_tag=PYH62_00570 CP118825.1 Protein Homology CDS 119492 120754 . - 0 ID=cds-WHI79377.1;Parent=gene-PYH62_00570;Dbxref=NCBI_GP:WHI79377.1;Name=WHI79377.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;gene=mobV;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001619005.1;locus_tag=PYH62_00570;product=MobV family relaxase;protein_id=WHI79377.1;transl_table=11 CP118825.1 Genbank gene 121261 121665 . - . ID=gene-PYH62_00575;Name=bleO;gbkey=Gene;gene=bleO;gene_biotype=protein_coding;locus_tag=PYH62_00575 CP118825.1 Protein Homology CDS 121261 121665 . - 0 ID=cds-WHI79378.1;Parent=gene-PYH62_00575;Dbxref=NCBI_GP:WHI79378.1;Name=WHI79378.1;gbkey=CDS;gene=bleO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001242578.1;locus_tag=PYH62_00575;product=bleomycin binding protein;protein_id=WHI79378.1;transl_table=11 CP118825.1 Genbank gene 121882 122652 . - . ID=gene-PYH62_00580;Name=aadD1;gbkey=Gene;gene=aadD1;gene_biotype=protein_coding;locus_tag=PYH62_00580 CP118825.1 Protein Homology CDS 121882 122652 . - 0 ID=cds-WHI79379.1;Parent=gene-PYH62_00580;Dbxref=NCBI_GP:WHI79379.1;Name=WHI79379.1;Ontology_term=GO:0046677;gbkey=CDS;gene=aadD1;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_032488330.1;locus_tag=PYH62_00580;product=aminoglycoside O-nucleotidyltransferase ANT(4')-Ia;protein_id=WHI79379.1;transl_table=11 CP118825.1 Genbank gene 122824 123498 . - . ID=gene-PYH62_00585;Name=PYH62_00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00585 CP118825.1 Protein Homology CDS 122824 123498 . - 0 ID=cds-WHI79380.1;Parent=gene-PYH62_00585;Dbxref=NCBI_GP:WHI79380.1;Name=WHI79380.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=PYH62_00585;product=IS6-like element IS257 family transposase;protein_id=WHI79380.1;transl_table=11 CP118825.1 Genbank gene 123582 123923 . + . ID=gene-PYH62_00590;Name=PYH62_00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00590 CP118825.1 Protein Homology CDS 123582 123923 . + 0 ID=cds-WHI80217.1;Parent=gene-PYH62_00590;Dbxref=NCBI_GP:WHI80217.1;Name=WHI80217.1;Ontology_term=GO:0006084,GO:0010142,GO:0004421;gbkey=CDS;go_function=hydroxymethylglutaryl-CoA synthase activity|0004421||IEA;go_process=acetyl-CoA metabolic process|0006084||IEA,farnesyl diphosphate biosynthetic process%2C mevalonate pathway|0010142||IEA;inference=COORDINATES: protein motif:HMM:NF020129.2;locus_tag=PYH62_00590;product=hydroxymethylglutaryl-CoA synthase;protein_id=WHI80217.1;transl_table=11 CP118825.1 Genbank gene 124720 125463 . + . ID=gene-PYH62_00595;Name=PYH62_00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00595 CP118825.1 Protein Homology CDS 124720 125463 . + 0 ID=cds-WHI79381.1;Parent=gene-PYH62_00595;Dbxref=NCBI_GP:WHI79381.1;Name=WHI79381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830227.1;locus_tag=PYH62_00595;product=glycerophosphoryl diester phosphodiesterase;protein_id=WHI79381.1;transl_table=11 CP118825.1 Genbank gene 125560 125988 . + . ID=gene-PYH62_00600;Name=PYH62_00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00600 CP118825.1 Protein Homology CDS 125560 125988 . + 0 ID=cds-WHI79382.1;Parent=gene-PYH62_00600;Dbxref=NCBI_GP:WHI79382.1;Name=WHI79382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000872606.1;locus_tag=PYH62_00600;product=MaoC family dehydratase;protein_id=WHI79382.1;transl_table=11 CP118825.1 Genbank gene 126034 128043 . - . ID=gene-PYH62_00605;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=PYH62_00605 CP118825.1 Protein Homology CDS 126034 128043 . - 0 ID=cds-WHI79383.1;Parent=gene-PYH62_00605;Dbxref=NCBI_GP:WHI79383.1;Name=WHI79383.1;Ontology_term=GO:0046677,GO:0008658;gbkey=CDS;gene=mecA;go_function=penicillin binding|0008658||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001801873.1;locus_tag=PYH62_00605;product=PBP2a family beta-lactam-resistant peptidoglycan transpeptidase MecA;protein_id=WHI79383.1;transl_table=11 CP118825.1 Genbank gene 128140 129897 . + . ID=gene-PYH62_00610;Name=mecR1;gbkey=Gene;gene=mecR1;gene_biotype=protein_coding;locus_tag=PYH62_00610 CP118825.1 Protein Homology CDS 128140 129897 . + 0 ID=cds-WHI79384.1;Parent=gene-PYH62_00610;Dbxref=NCBI_GP:WHI79384.1;Name=WHI79384.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mecR1;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000952924.1;locus_tag=PYH62_00610;product=beta-lactam sensor/signal transducer MecR1;protein_id=WHI79384.1;transl_table=11 CP118825.1 Genbank gene 129897 130268 . + . ID=gene-PYH62_00615;Name=mecI;gbkey=Gene;gene=mecI;gene_biotype=protein_coding;locus_tag=PYH62_00615 CP118825.1 Protein Homology CDS 129897 130268 . + 0 ID=cds-WHI79385.1;Parent=gene-PYH62_00615;Dbxref=NCBI_GP:WHI79385.1;Name=WHI79385.1;Ontology_term=GO:0045892;gbkey=CDS;gene=mecI;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000369216.1;locus_tag=PYH62_00615;product=mecA-type methicillin resistance repressor MecI;protein_id=WHI79385.1;transl_table=11 CP118825.1 Genbank gene 130544 131323 . + . ID=gene-PYH62_00620;Name=PYH62_00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00620 CP118825.1 Protein Homology CDS 130544 131323 . + 0 ID=cds-WHI79386.1;Parent=gene-PYH62_00620;Dbxref=NCBI_GP:WHI79386.1;Name=WHI79386.1;Ontology_term=GO:0045150,GO:0019152;gbkey=CDS;go_function=acetoin dehydrogenase activity|0019152||IEA;go_process=acetoin catabolic process|0045150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458838.1;locus_tag=PYH62_00620;product=(S)-acetoin forming diacetyl reductase;protein_id=WHI79386.1;transl_table=11 CP118825.1 Genbank gene 131773 132012 . + . ID=gene-PYH62_00625;Name=PYH62_00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00625 CP118825.1 Protein Homology CDS 131773 132012 . + 0 ID=cds-WHI79387.1;Parent=gene-PYH62_00625;Dbxref=NCBI_GP:WHI79387.1;Name=WHI79387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454631.1;locus_tag=PYH62_00625;product=hypothetical protein;protein_id=WHI79387.1;transl_table=11 CP118825.1 Genbank gene 132165 133508 . + . ID=gene-PYH62_00630;Name=PYH62_00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00630 CP118825.1 Protein Homology CDS 132165 133508 . + 0 ID=cds-WHI79388.1;Parent=gene-PYH62_00630;Dbxref=NCBI_GP:WHI79388.1;Name=WHI79388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467669.1;locus_tag=PYH62_00630;product=sugar porter family MFS transporter;protein_id=WHI79388.1;transl_table=11 CP118825.1 Genbank gene 133609 135312 . + . ID=gene-PYH62_00635;Name=PYH62_00635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00635 CP118825.1 Protein Homology CDS 133609 135312 . + 0 ID=cds-WHI79389.1;Parent=gene-PYH62_00635;Dbxref=NCBI_GP:WHI79389.1;Name=WHI79389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454633.1;locus_tag=PYH62_00635;product=ABC-ATPase domain-containing protein;protein_id=WHI79389.1;transl_table=11 CP118825.1 Genbank gene 135679 136119 . + . ID=gene-PYH62_00640;Name=PYH62_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00640 CP118825.1 Protein Homology CDS 135679 136119 . + 0 ID=cds-WHI79390.1;Parent=gene-PYH62_00640;Dbxref=NCBI_GP:WHI79390.1;Name=WHI79390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490895.1;locus_tag=PYH62_00640;product=MarR family transcriptional regulator;protein_id=WHI79390.1;transl_table=11 CP118825.1 Genbank gene 136137 137480 . + . ID=gene-PYH62_00645;Name=PYH62_00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00645 CP118825.1 Protein Homology CDS 136137 137480 . + 0 ID=cds-WHI79391.1;Parent=gene-PYH62_00645;Dbxref=NCBI_GP:WHI79391.1;Name=WHI79391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012085178.1;locus_tag=PYH62_00645;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WHI79391.1;transl_table=11 CP118825.1 Genbank gene 137616 138473 . + . ID=gene-PYH62_00650;Name=PYH62_00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00650 CP118825.1 Protein Homology CDS 137616 138473 . + 0 ID=cds-WHI79392.1;Parent=gene-PYH62_00650;Dbxref=NCBI_GP:WHI79392.1;Name=WHI79392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174755.1;locus_tag=PYH62_00650;product=ABC transporter substrate-binding protein;protein_id=WHI79392.1;transl_table=11 CP118825.1 Genbank gene 138522 139289 . - . ID=gene-PYH62_00655;Name=PYH62_00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00655 CP118825.1 Protein Homology CDS 138522 139289 . - 0 ID=cds-WHI79393.1;Parent=gene-PYH62_00655;Dbxref=NCBI_GP:WHI79393.1;Name=WHI79393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479048.1;locus_tag=PYH62_00655;product=SDR family oxidoreductase;protein_id=WHI79393.1;transl_table=11 CP118825.1 Genbank gene 139311 140537 . - . ID=gene-PYH62_00660;Name=PYH62_00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00660 CP118825.1 Protein Homology CDS 139311 140537 . - 0 ID=cds-WHI80218.1;Parent=gene-PYH62_00660;Dbxref=NCBI_GP:WHI80218.1;Name=WHI80218.1;Ontology_term=GO:0008218,GO:0003995;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA;go_process=bioluminescence|0008218||IEA;inference=COORDINATES: protein motif:HMM:NF017686.2;locus_tag=PYH62_00660;product=acyl-CoA reductase;protein_id=WHI80218.1;transl_table=11 CP118825.1 Genbank gene 140489 140743 . - . ID=gene-PYH62_00665;Name=PYH62_00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00665 CP118825.1 GeneMarkS-2+ CDS 140489 140743 . - 0 ID=cds-WHI79394.1;Parent=gene-PYH62_00665;Dbxref=NCBI_GP:WHI79394.1;Name=WHI79394.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_00665;product=hypothetical protein;protein_id=WHI79394.1;transl_table=11 CP118825.1 Genbank gene 140755 141822 . - . ID=gene-PYH62_00670;Name=PYH62_00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00670 CP118825.1 Protein Homology CDS 140755 141822 . - 0 ID=cds-WHI79395.1;Parent=gene-PYH62_00670;Dbxref=NCBI_GP:WHI79395.1;Name=WHI79395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460757.1;locus_tag=PYH62_00670;product=long-chain fatty acid--CoA ligase;protein_id=WHI79395.1;transl_table=11 CP118825.1 cmsearch riboswitch 141888 141991 . - . ID=id-CP118825.1:141888..141991;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch CP118825.1 cmsearch riboswitch 142091 142189 . + . ID=id-CP118825.1:142091..142189;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch CP118825.1 Genbank gene 142294 142866 . + . ID=gene-PYH62_00675;Name=PYH62_00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00675 CP118825.1 Protein Homology CDS 142294 142866 . + 0 ID=cds-WHI79396.1;Parent=gene-PYH62_00675;Dbxref=NCBI_GP:WHI79396.1;Name=WHI79396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492523.1;locus_tag=PYH62_00675;product=ECF transporter S component;protein_id=WHI79396.1;transl_table=11 CP118825.1 Genbank gene 142948 143940 . - . ID=gene-PYH62_00680;Name=PYH62_00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00680 CP118825.1 Protein Homology CDS 142948 143940 . - 0 ID=cds-WHI79397.1;Parent=gene-PYH62_00680;Dbxref=NCBI_GP:WHI79397.1;Name=WHI79397.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174760.1;locus_tag=PYH62_00680;product=putative sulfate exporter family transporter;protein_id=WHI79397.1;transl_table=11 CP118825.1 Genbank gene 144054 144875 . + . ID=gene-PYH62_00685;Name=PYH62_00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00685 CP118825.1 Protein Homology CDS 144054 144875 . + 0 ID=cds-WHI79398.1;Parent=gene-PYH62_00685;Dbxref=NCBI_GP:WHI79398.1;Name=WHI79398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458575.1;locus_tag=PYH62_00685;product=LysR substrate-binding domain-containing protein;protein_id=WHI79398.1;transl_table=11 CP118825.1 Genbank gene 144947 145633 . - . ID=gene-PYH62_00690;Name=PYH62_00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00690 CP118825.1 Protein Homology CDS 144947 145633 . - 0 ID=cds-WHI79399.1;Parent=gene-PYH62_00690;Dbxref=NCBI_GP:WHI79399.1;Name=WHI79399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454639.1;locus_tag=PYH62_00690;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WHI79399.1;transl_table=11 CP118825.1 Genbank gene 145925 146437 . + . ID=gene-PYH62_00695;Name=PYH62_00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00695 CP118825.1 Protein Homology CDS 145925 146437 . + 0 ID=cds-WHI79400.1;Parent=gene-PYH62_00695;Dbxref=NCBI_GP:WHI79400.1;Name=WHI79400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174762.1;locus_tag=PYH62_00695;product=DUF308 domain-containing protein;protein_id=WHI79400.1;transl_table=11 CP118825.1 Genbank gene 146615 147811 . + . ID=gene-PYH62_00700;Name=PYH62_00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00700 CP118825.1 Protein Homology CDS 146615 147811 . + 0 ID=cds-WHI79401.1;Parent=gene-PYH62_00700;Dbxref=NCBI_GP:WHI79401.1;Name=WHI79401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_087436684.1;locus_tag=PYH62_00700;product=3M3SH-releasing C-S lyase;protein_id=WHI79401.1;transl_table=11 CP118825.1 Genbank gene 147828 148235 . + . ID=gene-PYH62_00705;Name=PYH62_00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00705 CP118825.1 Protein Homology CDS 147828 148235 . + 0 ID=cds-WHI79402.1;Parent=gene-PYH62_00705;Dbxref=NCBI_GP:WHI79402.1;Name=WHI79402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454643.1;locus_tag=PYH62_00705;product=carboxymuconolactone decarboxylase family protein;protein_id=WHI79402.1;transl_table=11 CP118825.1 Genbank gene 148281 148898 . - . ID=gene-PYH62_00710;Name=PYH62_00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00710 CP118825.1 Protein Homology CDS 148281 148898 . - 0 ID=cds-WHI79403.1;Parent=gene-PYH62_00710;Dbxref=NCBI_GP:WHI79403.1;Name=WHI79403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465246.1;locus_tag=PYH62_00710;product=CadD family cadmium resistance transporter;protein_id=WHI79403.1;transl_table=11 CP118825.1 Genbank gene 149158 150510 . + . ID=gene-PYH62_00715;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=PYH62_00715 CP118825.1 Protein Homology CDS 149158 150510 . + 0 ID=cds-WHI79404.1;Parent=gene-PYH62_00715;Dbxref=NCBI_GP:WHI79404.1;Name=WHI79404.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368030.1;locus_tag=PYH62_00715;product=dihydrolipoyl dehydrogenase;protein_id=WHI79404.1;transl_table=11 CP118825.1 Genbank gene 150552 151505 . + . ID=gene-PYH62_00720;Name=PYH62_00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00720 CP118825.1 Protein Homology CDS 150552 151505 . + 0 ID=cds-WHI79405.1;Parent=gene-PYH62_00720;Dbxref=NCBI_GP:WHI79405.1;Name=WHI79405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458080.1;locus_tag=PYH62_00720;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WHI79405.1;transl_table=11 CP118825.1 Genbank gene 151575 152615 . + . ID=gene-PYH62_00725;Name=PYH62_00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00725 CP118825.1 Protein Homology CDS 151575 152615 . + 0 ID=cds-WHI79406.1;Parent=gene-PYH62_00725;Dbxref=NCBI_GP:WHI79406.1;Name=WHI79406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830482.1;locus_tag=PYH62_00725;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WHI79406.1;transl_table=11 CP118825.1 Genbank gene 152630 153913 . + . ID=gene-PYH62_00730;Name=PYH62_00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00730 CP118825.1 Protein Homology CDS 152630 153913 . + 0 ID=cds-WHI79407.1;Parent=gene-PYH62_00730;Dbxref=NCBI_GP:WHI79407.1;Name=WHI79407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494046.1;locus_tag=PYH62_00730;product=dihydrolipoamide acetyltransferase family protein;protein_id=WHI79407.1;transl_table=11 CP118825.1 Genbank gene 154009 154224 . + . ID=gene-PYH62_00735;Name=PYH62_00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00735 CP118825.1 Protein Homology CDS 154009 154224 . + 0 ID=cds-WHI79408.1;Parent=gene-PYH62_00735;Dbxref=NCBI_GP:WHI79408.1;Name=WHI79408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449335.1;locus_tag=PYH62_00735;product=zinc ribbon domain-containing protein;protein_id=WHI79408.1;transl_table=11 CP118825.1 cmsearch riboswitch 154413 154517 . + . ID=id-CP118825.1:154413..154517;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch CP118825.1 Genbank gene 154715 156457 . + . ID=gene-PYH62_00740;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=PYH62_00740 CP118825.1 Protein Homology CDS 154715 156457 . + 0 ID=cds-WHI79409.1;Parent=gene-PYH62_00740;Dbxref=NCBI_GP:WHI79409.1;Name=WHI79409.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020219426.1;locus_tag=PYH62_00740;product=phosphomethylpyrimidine synthase ThiC;protein_id=WHI79409.1;transl_table=11 CP118825.1 Genbank gene 156593 157498 . + . ID=gene-PYH62_00745;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=PYH62_00745 CP118825.1 Protein Homology CDS 156593 157498 . + 0 ID=cds-WHI79410.1;Parent=gene-PYH62_00745;Dbxref=NCBI_GP:WHI79410.1;Name=WHI79410.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454651.1;locus_tag=PYH62_00745;product=EamA family transporter RarD;protein_id=WHI79410.1;transl_table=11 CP118825.1 Genbank gene 158457 158975 . + . ID=gene-PYH62_00750;Name=PYH62_00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00750 CP118825.1 Protein Homology CDS 158457 158975 . + 0 ID=cds-WHI79411.1;Parent=gene-PYH62_00750;Dbxref=NCBI_GP:WHI79411.1;Name=WHI79411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829442.1;locus_tag=PYH62_00750;product=hypothetical protein;protein_id=WHI79411.1;transl_table=11 CP118825.1 Genbank gene 159025 159189 . - . ID=gene-PYH62_00755;Name=PYH62_00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00755 CP118825.1 Protein Homology CDS 159025 159189 . - 0 ID=cds-WHI79412.1;Parent=gene-PYH62_00755;Dbxref=NCBI_GP:WHI79412.1;Name=WHI79412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449328.1;locus_tag=PYH62_00755;product=hypothetical protein;protein_id=WHI79412.1;transl_table=11 CP118825.1 Genbank gene 159516 159704 . + . ID=gene-PYH62_00760;Name=PYH62_00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00760 CP118825.1 Protein Homology CDS 159516 159704 . + 0 ID=cds-WHI79413.1;Parent=gene-PYH62_00760;Dbxref=NCBI_GP:WHI79413.1;Name=WHI79413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454655.1;locus_tag=PYH62_00760;product=hypothetical protein;protein_id=WHI79413.1;transl_table=11 CP118825.1 Genbank gene 159979 160161 . + . ID=gene-PYH62_00765;Name=PYH62_00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00765 CP118825.1 Protein Homology CDS 159979 160161 . + 0 ID=cds-WHI79414.1;Parent=gene-PYH62_00765;Dbxref=NCBI_GP:WHI79414.1;Name=WHI79414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500874.1;locus_tag=PYH62_00765;product=hypothetical protein;protein_id=WHI79414.1;transl_table=11 CP118825.1 Genbank gene 160387 160566 . + . ID=gene-PYH62_00770;Name=PYH62_00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00770 CP118825.1 Protein Homology CDS 160387 160566 . + 0 ID=cds-WHI79415.1;Parent=gene-PYH62_00770;Dbxref=NCBI_GP:WHI79415.1;Name=WHI79415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000761343.1;locus_tag=PYH62_00770;product=helix-turn-helix transcriptional regulator;protein_id=WHI79415.1;transl_table=11 CP118825.1 Genbank gene 160567 160743 . + . ID=gene-PYH62_00775;Name=PYH62_00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00775 CP118825.1 GeneMarkS-2+ CDS 160567 160743 . + 0 ID=cds-WHI79416.1;Parent=gene-PYH62_00775;Dbxref=NCBI_GP:WHI79416.1;Name=WHI79416.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_00775;product=hypothetical protein;protein_id=WHI79416.1;transl_table=11 CP118825.1 Genbank gene 160863 161069 . + . ID=gene-PYH62_00780;Name=PYH62_00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00780 CP118825.1 Protein Homology CDS 160863 161069 . + 0 ID=cds-WHI79417.1;Parent=gene-PYH62_00780;Dbxref=NCBI_GP:WHI79417.1;Name=WHI79417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020006398.1;locus_tag=PYH62_00780;product=hypothetical protein;protein_id=WHI79417.1;transl_table=11 CP118825.1 Genbank gene 161312 161524 . + . ID=gene-PYH62_00785;Name=PYH62_00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00785 CP118825.1 Protein Homology CDS 161312 161524 . + 0 ID=cds-WHI79418.1;Parent=gene-PYH62_00785;Dbxref=NCBI_GP:WHI79418.1;Name=WHI79418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174779.1;locus_tag=PYH62_00785;product=VraH family protein;protein_id=WHI79418.1;transl_table=11 CP118825.1 Genbank gene 162176 162784 . - . ID=gene-PYH62_00790;Name=PYH62_00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00790 CP118825.1 Protein Homology CDS 162176 162784 . - 0 ID=cds-WHI79419.1;Parent=gene-PYH62_00790;Dbxref=NCBI_GP:WHI79419.1;Name=WHI79419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454657.1;locus_tag=PYH62_00790;product=stage II sporulation protein M;protein_id=WHI79419.1;transl_table=11 CP118825.1 Genbank gene 163355 165613 . + . ID=gene-PYH62_00795;Name=PYH62_00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00795 CP118825.1 Protein Homology CDS 163355 165613 . + 0 ID=cds-WHI79420.1;Parent=gene-PYH62_00795;Dbxref=NCBI_GP:WHI79420.1;Name=WHI79420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446094.1;locus_tag=PYH62_00795;product=excinuclease ABC subunit UvrA;protein_id=WHI79420.1;transl_table=11 CP118825.1 Genbank pseudogene 165682 165829 . + . ID=gene-PYH62_00800;Name=PYH62_00800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_00800;pseudo=true CP118825.1 Protein Homology CDS 165682 165829 . + 0 ID=cds-PYH62_00800;Parent=gene-PYH62_00800;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467450.1;locus_tag=PYH62_00800;product=winged helix-turn-helix transcriptional regulator;pseudo=true;transl_table=11 CP118825.1 Genbank gene 165887 166081 . - . ID=gene-PYH62_00805;Name=PYH62_00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00805 CP118825.1 Protein Homology CDS 165887 166081 . - 0 ID=cds-WHI79421.1;Parent=gene-PYH62_00805;Dbxref=NCBI_GP:WHI79421.1;Name=WHI79421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174783.1;locus_tag=PYH62_00805;product=alcohol dehydrogenase;protein_id=WHI79421.1;transl_table=11 CP118825.1 Genbank gene 166563 166664 . + . ID=gene-PYH62_00810;Name=PYH62_00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00810 CP118825.1 Protein Homology CDS 166563 166664 . + 0 ID=cds-WHI79422.1;Parent=gene-PYH62_00810;Dbxref=NCBI_GP:WHI79422.1;Name=WHI79422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000228874.1;locus_tag=PYH62_00810;product=type I toxin-antitoxin system Fst family toxin;protein_id=WHI79422.1;transl_table=11 CP118825.1 Genbank gene 166804 168012 . - . ID=gene-PYH62_00815;Name=PYH62_00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00815 CP118825.1 Protein Homology CDS 166804 168012 . - 0 ID=cds-WHI79423.1;Parent=gene-PYH62_00815;Dbxref=NCBI_GP:WHI79423.1;Name=WHI79423.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037531.2;locus_tag=PYH62_00815;product=hypothetical protein;protein_id=WHI79423.1;transl_table=11 CP118825.1 Genbank gene 168179 168790 . + . ID=gene-PYH62_00820;Name=PYH62_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00820 CP118825.1 Protein Homology CDS 168179 168790 . + 0 ID=cds-WHI79424.1;Parent=gene-PYH62_00820;Dbxref=NCBI_GP:WHI79424.1;Name=WHI79424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487382.1;locus_tag=PYH62_00820;product=recombinase family protein;protein_id=WHI79424.1;transl_table=11 CP118825.1 Genbank gene 168938 169612 . + . ID=gene-PYH62_00825;Name=PYH62_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00825 CP118825.1 Protein Homology CDS 168938 169612 . + 0 ID=cds-WHI79425.1;Parent=gene-PYH62_00825;Dbxref=NCBI_GP:WHI79425.1;Name=WHI79425.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=PYH62_00825;product=IS6-like element IS257 family transposase;protein_id=WHI79425.1;transl_table=11 CP118825.1 Genbank pseudogene 169661 169939 . + . ID=gene-PYH62_00830;Name=PYH62_00830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_00830;pseudo=true CP118825.1 Protein Homology CDS 169661 169939 . + 0 ID=cds-PYH62_00830;Parent=gene-PYH62_00830;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831689.1;locus_tag=PYH62_00830;product=DUF1054 family protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 170069 171415 . + . ID=gene-PYH62_00835;Name=PYH62_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00835 CP118825.1 Protein Homology CDS 170069 171415 . + 0 ID=cds-WHI79426.1;Parent=gene-PYH62_00835;Dbxref=NCBI_GP:WHI79426.1;Name=WHI79426.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175574.1;locus_tag=PYH62_00835;product=Nramp family divalent metal transporter;protein_id=WHI79426.1;transl_table=11 CP118825.1 Genbank pseudogene 171629 172093 . - . ID=gene-PYH62_00840;Name=PYH62_00840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_00840;pseudo=true CP118825.1 Protein Homology CDS 171629 172093 . - 0 ID=cds-PYH62_00840;Parent=gene-PYH62_00840;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474561.1;locus_tag=PYH62_00840;product=DUF4064 domain-containing protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 172150 172824 . + . ID=gene-PYH62_00845;Name=PYH62_00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00845 CP118825.1 Protein Homology CDS 172150 172824 . + 0 ID=cds-WHI79427.1;Parent=gene-PYH62_00845;Dbxref=NCBI_GP:WHI79427.1;Name=WHI79427.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=PYH62_00845;product=IS6-like element IS257 family transposase;protein_id=WHI79427.1;transl_table=11 CP118825.1 Genbank gene 173087 173944 . + . ID=gene-PYH62_00850;Name=PYH62_00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00850 CP118825.1 Protein Homology CDS 173087 173944 . + 0 ID=cds-WHI79428.1;Parent=gene-PYH62_00850;Dbxref=NCBI_GP:WHI79428.1;Name=WHI79428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499202.1;locus_tag=PYH62_00850;product=YitT family protein;protein_id=WHI79428.1;transl_table=11 CP118825.1 Genbank pseudogene 174022 174546 . - . ID=gene-PYH62_00855;Name=PYH62_00855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_00855;pseudo=true CP118825.1 Protein Homology CDS 174022 174546 . - 0 ID=cds-PYH62_00855;Parent=gene-PYH62_00855;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001105942.1;locus_tag=PYH62_00855;product=IS6-like element IS257 family transposase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 174972 175514 . - . ID=gene-PYH62_00860;Name=PYH62_00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00860 CP118825.1 Protein Homology CDS 174972 175514 . - 0 ID=cds-WHI79429.1;Parent=gene-PYH62_00860;Dbxref=NCBI_GP:WHI79429.1;Name=WHI79429.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011251335.1;locus_tag=PYH62_00860;product=recombinase family protein;protein_id=WHI79429.1;transl_table=11 CP118825.1 Genbank gene 175629 177080 . + . ID=gene-PYH62_00865;Name=PYH62_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00865 CP118825.1 Protein Homology CDS 175629 177080 . + 0 ID=cds-WHI79430.1;Parent=gene-PYH62_00865;Dbxref=NCBI_GP:WHI79430.1;Name=WHI79430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000229532.1;locus_tag=PYH62_00865;product=SulP family inorganic anion transporter;protein_id=WHI79430.1;transl_table=11 CP118825.1 Genbank gene 177093 177506 . + . ID=gene-PYH62_00870;Name=PYH62_00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00870 CP118825.1 Protein Homology CDS 177093 177506 . + 0 ID=cds-WHI79431.1;Parent=gene-PYH62_00870;Dbxref=NCBI_GP:WHI79431.1;Name=WHI79431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000282781.1;locus_tag=PYH62_00870;product=universal stress protein;protein_id=WHI79431.1;transl_table=11 CP118825.1 Genbank gene 178123 178275 . + . ID=gene-PYH62_00875;Name=PYH62_00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00875 CP118825.1 GeneMarkS-2+ CDS 178123 178275 . + 0 ID=cds-WHI79432.1;Parent=gene-PYH62_00875;Dbxref=NCBI_GP:WHI79432.1;Name=WHI79432.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_00875;product=hypothetical protein;protein_id=WHI79432.1;transl_table=11 CP118825.1 Genbank pseudogene 178514 178897 . + . ID=gene-PYH62_00880;Name=mobC;gbkey=Gene;gene=mobC;gene_biotype=pseudogene;locus_tag=PYH62_00880;pseudo=true CP118825.1 Protein Homology CDS 178514 178897 . + 0 ID=cds-PYH62_00880;Parent=gene-PYH62_00880;Note=internal stop;gbkey=CDS;gene=mobC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276928.1;locus_tag=PYH62_00880;product=plasmid mobilization relaxosome protein MobC;pseudo=true;transl_table=11 CP118825.1 Genbank gene 179062 179394 . + . ID=gene-PYH62_00885;Name=PYH62_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00885 CP118825.1 Protein Homology CDS 179062 179394 . + 0 ID=cds-WHI79433.1;Parent=gene-PYH62_00885;Dbxref=NCBI_GP:WHI79433.1;Name=WHI79433.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015397.2;locus_tag=PYH62_00885;product=relaxase/mobilization nuclease domain-containing protein;protein_id=WHI79433.1;transl_table=11 CP118825.1 Genbank gene 179381 179581 . + . ID=gene-PYH62_00890;Name=PYH62_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00890 CP118825.1 GeneMarkS-2+ CDS 179381 179581 . + 0 ID=cds-WHI79434.1;Parent=gene-PYH62_00890;Dbxref=NCBI_GP:WHI79434.1;Name=WHI79434.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_00890;product=hypothetical protein;protein_id=WHI79434.1;transl_table=11 CP118825.1 Genbank gene 179904 180335 . - . ID=gene-PYH62_00895;Name=PYH62_00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00895 CP118825.1 Protein Homology CDS 179904 180335 . - 0 ID=cds-WHI79435.1;Parent=gene-PYH62_00895;Dbxref=NCBI_GP:WHI79435.1;Name=WHI79435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000475805.1;locus_tag=PYH62_00895;product=universal stress protein;protein_id=WHI79435.1;transl_table=11 CP118825.1 Genbank gene 181185 182870 . + . ID=gene-PYH62_00900;Name=PYH62_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00900 CP118825.1 Protein Homology CDS 181185 182870 . + 0 ID=cds-WHI79436.1;Parent=gene-PYH62_00900;Dbxref=NCBI_GP:WHI79436.1;Name=WHI79436.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497483.1;locus_tag=PYH62_00900;product=IS1182 family transposase;protein_id=WHI79436.1;transl_table=11 CP118825.1 Genbank gene 183142 183414 . + . ID=gene-PYH62_00905;Name=PYH62_00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00905 CP118825.1 Protein Homology CDS 183142 183414 . + 0 ID=cds-WHI79437.1;Parent=gene-PYH62_00905;Dbxref=NCBI_GP:WHI79437.1;Name=WHI79437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175582.1;locus_tag=PYH62_00905;product=hypothetical protein;protein_id=WHI79437.1;transl_table=11 CP118825.1 Genbank pseudogene 184192 184275 . - . ID=gene-PYH62_00910;Name=PYH62_00910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_00910;pseudo=true CP118825.1 Protein Homology CDS 184192 184275 . - 0 ID=cds-PYH62_00910;Parent=gene-PYH62_00910;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498879.1;locus_tag=PYH62_00910;product=hypothetical protein;pseudo=true;transl_table=11 CP118825.1 Genbank pseudogene 184235 185237 . + . ID=gene-PYH62_00915;Name=PYH62_00915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_00915;pseudo=true CP118825.1 Protein Homology CDS 184235 185237 . + 0 ID=cds-PYH62_00915;Parent=gene-PYH62_00915;Note=frameshifted;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488256.1;locus_tag=PYH62_00915;product=PTS sugar transporter subunit IIC;pseudo=true;transl_table=11 CP118825.1 Genbank gene 185416 186414 . + . ID=gene-PYH62_00920;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=PYH62_00920 CP118825.1 Protein Homology CDS 185416 186414 . + 0 ID=cds-WHI79438.1;Parent=gene-PYH62_00920;Dbxref=NCBI_GP:WHI79438.1;Name=WHI79438.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002452600.1;locus_tag=PYH62_00920;product=ornithine carbamoyltransferase;protein_id=WHI79438.1;transl_table=11 CP118825.1 Genbank gene 186436 187368 . + . ID=gene-PYH62_00925;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=PYH62_00925 CP118825.1 Protein Homology CDS 186436 187368 . + 0 ID=cds-WHI79439.1;Parent=gene-PYH62_00925;Dbxref=NCBI_GP:WHI79439.1;Name=WHI79439.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274588.1;locus_tag=PYH62_00925;product=carbamate kinase;protein_id=WHI79439.1;transl_table=11 CP118825.1 Genbank gene 187618 188583 . + . ID=gene-PYH62_00930;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=PYH62_00930 CP118825.1 Protein Homology CDS 187618 188583 . + 0 ID=cds-WHI79440.1;Parent=gene-PYH62_00930;Dbxref=NCBI_GP:WHI79440.1;Name=WHI79440.1;Ontology_term=GO:0009102,GO:0004076,GO:0051537,GO:0051539,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834730.1;locus_tag=PYH62_00930;product=biotin synthase BioB;protein_id=WHI79440.1;transl_table=11 CP118825.1 Genbank gene 188635 189456 . - . ID=gene-PYH62_00935;Name=PYH62_00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00935 CP118825.1 GeneMarkS-2+ CDS 188635 189456 . - 0 ID=cds-WHI79441.1;Parent=gene-PYH62_00935;Dbxref=NCBI_GP:WHI79441.1;Name=WHI79441.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_00935;product=hypothetical protein;protein_id=WHI79441.1;transl_table=11 CP118825.1 Genbank gene 189471 190178 . - . ID=gene-PYH62_00940;Name=PYH62_00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00940 CP118825.1 GeneMarkS-2+ CDS 189471 190178 . - 0 ID=cds-WHI79442.1;Parent=gene-PYH62_00940;Dbxref=NCBI_GP:WHI79442.1;Name=WHI79442.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_00940;product=hypothetical protein;protein_id=WHI79442.1;transl_table=11 CP118825.1 Genbank gene 190252 190749 . - . ID=gene-PYH62_00945;Name=PYH62_00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00945 CP118825.1 Protein Homology CDS 190252 190749 . - 0 ID=cds-WHI79443.1;Parent=gene-PYH62_00945;Dbxref=NCBI_GP:WHI79443.1;Name=WHI79443.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019884.2;locus_tag=PYH62_00945;product=HTH domain-containing protein;protein_id=WHI79443.1;transl_table=11 CP118825.1 Genbank gene 190914 191171 . - . ID=gene-PYH62_00950;Name=PYH62_00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00950 CP118825.1 GeneMarkS-2+ CDS 190914 191171 . - 0 ID=cds-WHI79444.1;Parent=gene-PYH62_00950;Dbxref=NCBI_GP:WHI79444.1;Name=WHI79444.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_00950;product=hypothetical protein;protein_id=WHI79444.1;transl_table=11 CP118825.1 Genbank gene 191579 192733 . + . ID=gene-PYH62_00955;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=PYH62_00955 CP118825.1 Protein Homology CDS 191579 192733 . + 0 ID=cds-WHI79445.1;Parent=gene-PYH62_00955;Dbxref=NCBI_GP:WHI79445.1;Name=WHI79445.1;Ontology_term=GO:0006040,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=amino sugar metabolic process|0006040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175591.1;locus_tag=PYH62_00955;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WHI79445.1;transl_table=11 CP118825.1 Genbank gene 192865 193107 . + . ID=gene-PYH62_00960;Name=PYH62_00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00960 CP118825.1 Protein Homology CDS 192865 193107 . + 0 ID=cds-WHI79446.1;Parent=gene-PYH62_00960;Dbxref=NCBI_GP:WHI79446.1;Name=WHI79446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449323.1;locus_tag=PYH62_00960;product=hypothetical protein;protein_id=WHI79446.1;transl_table=11 CP118825.1 Genbank pseudogene 193403 195092 . + . ID=gene-PYH62_00965;Name=PYH62_00965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_00965;pseudo=true CP118825.1 Protein Homology CDS 193403 195092 . + 0 ID=cds-PYH62_00965;Parent=gene-PYH62_00965;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011082549.1;locus_tag=PYH62_00965;product=IS1182 family transposase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 195073 195804 . - . ID=gene-PYH62_00970;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=PYH62_00970 CP118825.1 Protein Homology CDS 195073 195804 . - 0 ID=cds-WHI80219.1;Parent=gene-PYH62_00970;Dbxref=NCBI_GP:WHI80219.1;Name=WHI80219.1;Ontology_term=GO:0006046,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine catabolic process|0006046||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834733.1;locus_tag=PYH62_00970;product=glucosamine-6-phosphate deaminase;protein_id=WHI80219.1;transl_table=11 CP118825.1 Genbank gene 195826 196500 . - . ID=gene-PYH62_00975;Name=PYH62_00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00975 CP118825.1 Protein Homology CDS 195826 196500 . - 0 ID=cds-WHI79447.1;Parent=gene-PYH62_00975;Dbxref=NCBI_GP:WHI79447.1;Name=WHI79447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449363.1;locus_tag=PYH62_00975;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=WHI79447.1;transl_table=11 CP118825.1 Genbank gene 196701 197507 . + . ID=gene-PYH62_00980;Name=PYH62_00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00980 CP118825.1 Protein Homology CDS 196701 197507 . + 0 ID=cds-WHI79448.1;Parent=gene-PYH62_00980;Dbxref=NCBI_GP:WHI79448.1;Name=WHI79448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449281.1;locus_tag=PYH62_00980;product=MurR/RpiR family transcriptional regulator;protein_id=WHI79448.1;transl_table=11 CP118825.1 Genbank gene 197549 198409 . - . ID=gene-PYH62_00985;Name=PYH62_00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00985 CP118825.1 Protein Homology CDS 197549 198409 . - 0 ID=cds-WHI79449.1;Parent=gene-PYH62_00985;Dbxref=NCBI_GP:WHI79449.1;Name=WHI79449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454701.1;locus_tag=PYH62_00985;product=ROK family protein;protein_id=WHI79449.1;transl_table=11 CP118825.1 Genbank gene 198639 199520 . + . ID=gene-PYH62_00990;Name=PYH62_00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00990 CP118825.1 Protein Homology CDS 198639 199520 . + 0 ID=cds-WHI79450.1;Parent=gene-PYH62_00990;Dbxref=NCBI_GP:WHI79450.1;Name=WHI79450.1;Ontology_term=GO:0005975,GO:0008747;gbkey=CDS;go_function=N-acetylneuraminate lyase activity|0008747||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498885.1;locus_tag=PYH62_00990;product=N-acetylneuraminate lyase;protein_id=WHI79450.1;transl_table=11 CP118825.1 Genbank gene 199567 201099 . + . ID=gene-PYH62_00995;Name=PYH62_00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_00995 CP118825.1 Protein Homology CDS 199567 201099 . + 0 ID=cds-WHI79451.1;Parent=gene-PYH62_00995;Dbxref=NCBI_GP:WHI79451.1;Name=WHI79451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454702.1;locus_tag=PYH62_00995;product=sodium:solute symporter;protein_id=WHI79451.1;transl_table=11 CP118825.1 Genbank gene 201207 202034 . + . ID=gene-PYH62_01000;Name=PYH62_01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01000 CP118825.1 Protein Homology CDS 201207 202034 . + 0 ID=cds-WHI79452.1;Parent=gene-PYH62_01000;Dbxref=NCBI_GP:WHI79452.1;Name=WHI79452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454703.1;locus_tag=PYH62_01000;product=type II CAAX endopeptidase family protein;protein_id=WHI79452.1;transl_table=11 CP118825.1 Genbank gene 202107 202793 . + . ID=gene-PYH62_01005;Name=PYH62_01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01005 CP118825.1 Protein Homology CDS 202107 202793 . + 0 ID=cds-WHI79453.1;Parent=gene-PYH62_01005;Dbxref=NCBI_GP:WHI79453.1;Name=WHI79453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834735.1;locus_tag=PYH62_01005;product=NDxxF motif lipoprotein;protein_id=WHI79453.1;transl_table=11 CP118825.1 Genbank gene 202898 203701 . - . ID=gene-PYH62_01010;Name=PYH62_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01010 CP118825.1 Protein Homology CDS 202898 203701 . - 0 ID=cds-WHI79454.1;Parent=gene-PYH62_01010;Dbxref=NCBI_GP:WHI79454.1;Name=WHI79454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834736.1;locus_tag=PYH62_01010;product=type II CAAX endopeptidase family protein;protein_id=WHI79454.1;transl_table=11 CP118825.1 Genbank gene 203856 204482 . - . ID=gene-PYH62_01015;Name=PYH62_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01015 CP118825.1 Protein Homology CDS 203856 204482 . - 0 ID=cds-WHI79455.1;Parent=gene-PYH62_01015;Dbxref=NCBI_GP:WHI79455.1;Name=WHI79455.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449241.1;locus_tag=PYH62_01015;product=ATP-binding cassette domain-containing protein;protein_id=WHI79455.1;transl_table=11 CP118825.1 Genbank gene 204469 205242 . - . ID=gene-PYH62_01020;Name=PYH62_01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01020 CP118825.1 Protein Homology CDS 204469 205242 . - 0 ID=cds-WHI79456.1;Parent=gene-PYH62_01020;Dbxref=NCBI_GP:WHI79456.1;Name=WHI79456.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449331.1;locus_tag=PYH62_01020;product=ATP-binding cassette domain-containing protein;protein_id=WHI79456.1;transl_table=11 CP118825.1 Genbank gene 205209 205976 . - . ID=gene-PYH62_01025;Name=PYH62_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01025 CP118825.1 Protein Homology CDS 205209 205976 . - 0 ID=cds-WHI79457.1;Parent=gene-PYH62_01025;Dbxref=NCBI_GP:WHI79457.1;Name=WHI79457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478721.1;locus_tag=PYH62_01025;product=ABC transporter permease;protein_id=WHI79457.1;transl_table=11 CP118825.1 Genbank gene 205966 206925 . - . ID=gene-PYH62_01030;Name=PYH62_01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01030 CP118825.1 Protein Homology CDS 205966 206925 . - 0 ID=cds-WHI79458.1;Parent=gene-PYH62_01030;Dbxref=NCBI_GP:WHI79458.1;Name=WHI79458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449445.1;locus_tag=PYH62_01030;product=ABC transporter permease;protein_id=WHI79458.1;transl_table=11 CP118825.1 Genbank gene 206918 208480 . - . ID=gene-PYH62_01035;Name=PYH62_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01035 CP118825.1 Protein Homology CDS 206918 208480 . - 0 ID=cds-WHI79459.1;Parent=gene-PYH62_01035;Dbxref=NCBI_GP:WHI79459.1;Name=WHI79459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002460245.1;locus_tag=PYH62_01035;product=nickel ABC transporter substrate-binding protein;protein_id=WHI79459.1;transl_table=11 CP118825.1 Genbank gene 208642 209280 . - . ID=gene-PYH62_01040;Name=pcp;gbkey=Gene;gene=pcp;gene_biotype=protein_coding;locus_tag=PYH62_01040 CP118825.1 Protein Homology CDS 208642 209280 . - 0 ID=cds-WHI79460.1;Parent=gene-PYH62_01040;Dbxref=NCBI_GP:WHI79460.1;Name=WHI79460.1;Ontology_term=GO:0030163;gbkey=CDS;gene=pcp;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274622.1;locus_tag=PYH62_01040;product=pyroglutamyl-peptidase I;protein_id=WHI79460.1;transl_table=11 CP118825.1 Genbank gene 209463 210236 . + . ID=gene-PYH62_01045;Name=PYH62_01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01045 CP118825.1 Protein Homology CDS 209463 210236 . + 0 ID=cds-WHI79461.1;Parent=gene-PYH62_01045;Dbxref=NCBI_GP:WHI79461.1;Name=WHI79461.1;Ontology_term=GO:0045150,GO:0019152;gbkey=CDS;go_function=acetoin dehydrogenase activity|0019152||IEA;go_process=acetoin catabolic process|0045150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484659.1;locus_tag=PYH62_01045;product=acetoin reductase;protein_id=WHI79461.1;transl_table=11 CP118825.1 Genbank gene 210322 211299 . - . ID=gene-PYH62_01050;Name=PYH62_01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01050 CP118825.1 Protein Homology CDS 210322 211299 . - 0 ID=cds-WHI79462.1;Parent=gene-PYH62_01050;Dbxref=NCBI_GP:WHI79462.1;Name=WHI79462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002472797.1;locus_tag=PYH62_01050;product=choloylglycine hydrolase family protein;protein_id=WHI79462.1;transl_table=11 CP118825.1 Genbank gene 211319 212509 . - . ID=gene-PYH62_01055;Name=PYH62_01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01055 CP118825.1 Protein Homology CDS 211319 212509 . - 0 ID=cds-WHI79463.1;Parent=gene-PYH62_01055;Dbxref=NCBI_GP:WHI79463.1;Name=WHI79463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449184.1;locus_tag=PYH62_01055;product=MFS transporter;protein_id=WHI79463.1;transl_table=11 CP118825.1 Genbank gene 212612 213574 . - . ID=gene-PYH62_01060;Name=PYH62_01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01060 CP118825.1 Protein Homology CDS 212612 213574 . - 0 ID=cds-WHI79464.1;Parent=gene-PYH62_01060;Dbxref=NCBI_GP:WHI79464.1;Name=WHI79464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446905.1;locus_tag=PYH62_01060;product=rhodanese-related sulfurtransferase;protein_id=WHI79464.1;transl_table=11 CP118825.1 Genbank gene 213834 214814 . + . ID=gene-PYH62_01065;Name=PYH62_01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01065 CP118825.1 Protein Homology CDS 213834 214814 . + 0 ID=cds-WHI79465.1;Parent=gene-PYH62_01065;Dbxref=NCBI_GP:WHI79465.1;Name=WHI79465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449248.1;locus_tag=PYH62_01065;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WHI79465.1;transl_table=11 CP118825.1 Genbank gene 214993 216639 . + . ID=gene-PYH62_01070;Name=PYH62_01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01070 CP118825.1 Protein Homology CDS 214993 216639 . + 0 ID=cds-WHI79466.1;Parent=gene-PYH62_01070;Dbxref=NCBI_GP:WHI79466.1;Name=WHI79466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274630.1;locus_tag=PYH62_01070;product=phospho-sugar mutase;protein_id=WHI79466.1;transl_table=11 CP118825.1 Genbank gene 216713 217567 . - . ID=gene-PYH62_01075;Name=PYH62_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01075 CP118825.1 Protein Homology CDS 216713 217567 . - 0 ID=cds-WHI79467.1;Parent=gene-PYH62_01075;Dbxref=NCBI_GP:WHI79467.1;Name=WHI79467.1;Ontology_term=GO:0006807,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175519.1;locus_tag=PYH62_01075;product=urease accessory protein UreD;protein_id=WHI79467.1;transl_table=11 CP118825.1 Genbank gene 217567 218181 . - . ID=gene-PYH62_01080;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=PYH62_01080 CP118825.1 Protein Homology CDS 217567 218181 . - 0 ID=cds-WHI79468.1;Parent=gene-PYH62_01080;Dbxref=NCBI_GP:WHI79468.1;Name=WHI79468.1;Ontology_term=GO:0019627,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501025.1;locus_tag=PYH62_01080;product=urease accessory protein UreG;protein_id=WHI79468.1;transl_table=11 CP118825.1 Genbank gene 218194 218883 . - . ID=gene-PYH62_01085;Name=PYH62_01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01085 CP118825.1 Protein Homology CDS 218194 218883 . - 0 ID=cds-WHI79469.1;Parent=gene-PYH62_01085;Dbxref=NCBI_GP:WHI79469.1;Name=WHI79469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501024.1;locus_tag=PYH62_01085;product=urease accessory protein UreF;protein_id=WHI79469.1;transl_table=11 CP118825.1 Genbank gene 218876 219328 . - . ID=gene-PYH62_01090;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=PYH62_01090 CP118825.1 Protein Homology CDS 218876 219328 . - 0 ID=cds-WHI79470.1;Parent=gene-PYH62_01090;Dbxref=NCBI_GP:WHI79470.1;Name=WHI79470.1;gbkey=CDS;gene=ureE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501023.1;locus_tag=PYH62_01090;product=urease accessory protein UreE;protein_id=WHI79470.1;transl_table=11 CP118825.1 Genbank gene 219340 221055 . - . ID=gene-PYH62_01095;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=PYH62_01095 CP118825.1 Protein Homology CDS 219340 221055 . - 0 ID=cds-WHI79471.1;Parent=gene-PYH62_01095;Dbxref=NCBI_GP:WHI79471.1;Name=WHI79471.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447295.1;locus_tag=PYH62_01095;product=urease subunit alpha;protein_id=WHI79471.1;transl_table=11 CP118825.1 Genbank gene 221055 221462 . - . ID=gene-PYH62_01100;Name=PYH62_01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01100 CP118825.1 Protein Homology CDS 221055 221462 . - 0 ID=cds-WHI79472.1;Parent=gene-PYH62_01100;Dbxref=NCBI_GP:WHI79472.1;Name=WHI79472.1;Ontology_term=GO:0043419,GO:0035550;gbkey=CDS;go_component=urease complex|0035550||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488234.1;locus_tag=PYH62_01100;product=urease subunit beta;protein_id=WHI79472.1;transl_table=11 CP118825.1 Genbank gene 221476 221778 . - . ID=gene-PYH62_01105;Name=PYH62_01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01105 CP118825.1 Protein Homology CDS 221476 221778 . - 0 ID=cds-WHI79473.1;Parent=gene-PYH62_01105;Dbxref=NCBI_GP:WHI79473.1;Name=WHI79473.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832402.1;locus_tag=PYH62_01105;product=urease subunit gamma;protein_id=WHI79473.1;transl_table=11 CP118825.1 Genbank gene 221979 222881 . + . ID=gene-PYH62_01110;Name=yut;gbkey=Gene;gene=yut;gene_biotype=protein_coding;locus_tag=PYH62_01110 CP118825.1 Protein Homology CDS 221979 222881 . + 0 ID=cds-WHI79474.1;Parent=gene-PYH62_01110;Dbxref=NCBI_GP:WHI79474.1;Name=WHI79474.1;Ontology_term=GO:0015840,GO:0015204,GO:0016020;gbkey=CDS;gene=yut;go_component=membrane|0016020||IEA;go_function=urea transmembrane transporter activity|0015204||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175514.1;locus_tag=PYH62_01110;product=urea transporter;protein_id=WHI79474.1;transl_table=11 CP118825.1 Genbank pseudogene 223000 223880 . + . ID=gene-PYH62_01115;Name=PYH62_01115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_01115;pseudo=true CP118825.1 Protein Homology CDS 223000 223880 . + 0 ID=cds-PYH62_01115;Parent=gene-PYH62_01115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175513.1;locus_tag=PYH62_01115;product=ribokinase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 224020 225159 . + . ID=gene-PYH62_01120;Name=PYH62_01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01120 CP118825.1 Protein Homology CDS 224020 225159 . + 0 ID=cds-WHI79475.1;Parent=gene-PYH62_01120;Dbxref=NCBI_GP:WHI79475.1;Name=WHI79475.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834746.1;locus_tag=PYH62_01120;product=polysaccharide deacetylase family protein;protein_id=WHI79475.1;transl_table=11 CP118825.1 Genbank gene 225325 226476 . + . ID=gene-PYH62_01125;Name=pbp4;gbkey=Gene;gene=pbp4;gene_biotype=protein_coding;locus_tag=PYH62_01125 CP118825.1 Protein Homology CDS 225325 226476 . + 0 ID=cds-WHI79476.1;Parent=gene-PYH62_01125;Dbxref=NCBI_GP:WHI79476.1;Name=WHI79476.1;gbkey=CDS;gene=pbp4;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175511.1;locus_tag=PYH62_01125;product=penicillin-binding protein PBP4;protein_id=WHI79476.1;transl_table=11 CP118825.1 Genbank gene 226571 227155 . - . ID=gene-PYH62_01130;Name=PYH62_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01130 CP118825.1 Protein Homology CDS 226571 227155 . - 0 ID=cds-WHI79477.1;Parent=gene-PYH62_01130;Dbxref=NCBI_GP:WHI79477.1;Name=WHI79477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449257.1;locus_tag=PYH62_01130;product=TetR/AcrR family transcriptional regulator;protein_id=WHI79477.1;transl_table=11 CP118825.1 Genbank gene 227352 229127 . + . ID=gene-PYH62_01135;Name=PYH62_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01135 CP118825.1 Protein Homology CDS 227352 229127 . + 0 ID=cds-WHI79478.1;Parent=gene-PYH62_01135;Dbxref=NCBI_GP:WHI79478.1;Name=WHI79478.1;Ontology_term=GO:0006631,GO:0050151,GO:0071949;gbkey=CDS;go_function=oleate hydratase activity|0050151||IEA,FAD binding|0071949||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498665.1;locus_tag=PYH62_01135;product=oleate hydratase;protein_id=WHI79478.1;transl_table=11 CP118825.1 Genbank pseudogene 229188 229456 . - . ID=gene-PYH62_01140;Name=PYH62_01140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_01140;pseudo=true CP118825.1 Protein Homology CDS 229188 229456 . - 0 ID=cds-PYH62_01140;Parent=gene-PYH62_01140;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466595.1;locus_tag=PYH62_01140;product=excinuclease ABC subunit UvrA;pseudo=true;transl_table=11 CP118825.1 Genbank gene 229548 230333 . - . ID=gene-PYH62_01145;Name=PYH62_01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01145 CP118825.1 Protein Homology CDS 229548 230333 . - 0 ID=cds-WHI79479.1;Parent=gene-PYH62_01145;Dbxref=NCBI_GP:WHI79479.1;Name=WHI79479.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454712.1;locus_tag=PYH62_01145;product=arylamine N-acetyltransferase;protein_id=WHI79479.1;transl_table=11 CP118825.1 Genbank gene 230413 231048 . - . ID=gene-PYH62_01150;Name=PYH62_01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01150 CP118825.1 Protein Homology CDS 230413 231048 . - 0 ID=cds-WHI79480.1;Parent=gene-PYH62_01150;Dbxref=NCBI_GP:WHI79480.1;Name=WHI79480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449477.1;locus_tag=PYH62_01150;product=ABC-2 transporter permease;protein_id=WHI79480.1;transl_table=11 CP118825.1 Genbank gene 231048 231893 . - . ID=gene-PYH62_01155;Name=PYH62_01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01155 CP118825.1 Protein Homology CDS 231048 231893 . - 0 ID=cds-WHI79481.1;Parent=gene-PYH62_01155;Dbxref=NCBI_GP:WHI79481.1;Name=WHI79481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834751.1;locus_tag=PYH62_01155;product=ABC transporter ATP-binding protein;protein_id=WHI79481.1;transl_table=11 CP118825.1 Genbank gene 231924 232646 . - . ID=gene-PYH62_01160;Name=PYH62_01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01160 CP118825.1 Protein Homology CDS 231924 232646 . - 0 ID=cds-WHI79482.1;Parent=gene-PYH62_01160;Dbxref=NCBI_GP:WHI79482.1;Name=WHI79482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454713.1;locus_tag=PYH62_01160;product=DUF3169 family protein;protein_id=WHI79482.1;transl_table=11 CP118825.1 Genbank gene 232643 232846 . - . ID=gene-PYH62_01165;Name=PYH62_01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01165 CP118825.1 Protein Homology CDS 232643 232846 . - 0 ID=cds-WHI79483.1;Parent=gene-PYH62_01165;Dbxref=NCBI_GP:WHI79483.1;Name=WHI79483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636694.1;locus_tag=PYH62_01165;product=helix-turn-helix transcriptional regulator;protein_id=WHI79483.1;transl_table=11 CP118825.1 Genbank gene 232973 233455 . - . ID=gene-PYH62_01170;Name=PYH62_01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01170 CP118825.1 Protein Homology CDS 232973 233455 . - 0 ID=cds-WHI79484.1;Parent=gene-PYH62_01170;Dbxref=NCBI_GP:WHI79484.1;Name=WHI79484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449396.1;locus_tag=PYH62_01170;product=Rrf2 family transcriptional regulator;protein_id=WHI79484.1;transl_table=11 CP118825.1 Genbank gene 233591 234511 . + . ID=gene-PYH62_01175;Name=PYH62_01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01175 CP118825.1 Protein Homology CDS 233591 234511 . + 0 ID=cds-WHI79485.1;Parent=gene-PYH62_01175;Dbxref=NCBI_GP:WHI79485.1;Name=WHI79485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175503.1;locus_tag=PYH62_01175;product=DMT family transporter;protein_id=WHI79485.1;transl_table=11 CP118825.1 Genbank gene 234749 235918 . + . ID=gene-PYH62_01180;Name=PYH62_01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01180 CP118825.1 Protein Homology CDS 234749 235918 . + 0 ID=cds-WHI79486.1;Parent=gene-PYH62_01180;Dbxref=NCBI_GP:WHI79486.1;Name=WHI79486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364632.1;locus_tag=PYH62_01180;product=MFS transporter;protein_id=WHI79486.1;transl_table=11 CP118825.1 Genbank gene 235966 236526 . - . ID=gene-PYH62_01185;Name=PYH62_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01185 CP118825.1 Protein Homology CDS 235966 236526 . - 0 ID=cds-WHI79487.1;Parent=gene-PYH62_01185;Dbxref=NCBI_GP:WHI79487.1;Name=WHI79487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175501.1;locus_tag=PYH62_01185;product=hypothetical protein;protein_id=WHI79487.1;transl_table=11 CP118825.1 Genbank pseudogene 236588 238130 . - . ID=gene-PYH62_01190;Name=PYH62_01190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_01190;pseudo=true CP118825.1 Protein Homology CDS 236588 238130 . - 0 ID=cds-PYH62_01190;Parent=gene-PYH62_01190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449347.1;locus_tag=PYH62_01190;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 238231 239868 . - . ID=gene-PYH62_01195;Name=PYH62_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01195 CP118825.1 Protein Homology CDS 238231 239868 . - 0 ID=cds-WHI79488.1;Parent=gene-PYH62_01195;Dbxref=NCBI_GP:WHI79488.1;Name=WHI79488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834755.1;locus_tag=PYH62_01195;product=DNA-binding protein;protein_id=WHI79488.1;transl_table=11 CP118825.1 Genbank gene 240119 241081 . + . ID=gene-PYH62_01200;Name=PYH62_01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01200 CP118825.1 Protein Homology CDS 240119 241081 . + 0 ID=cds-WHI79489.1;Parent=gene-PYH62_01200;Dbxref=NCBI_GP:WHI79489.1;Name=WHI79489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498705.1;locus_tag=PYH62_01200;product=phosphate/phosphite/phosphonate ABC transporter substrate-binding protein;protein_id=WHI79489.1;transl_table=11 CP118825.1 Genbank gene 241220 241993 . + . ID=gene-PYH62_01205;Name=phnC;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=PYH62_01205 CP118825.1 Protein Homology CDS 241220 241993 . + 0 ID=cds-WHI79490.1;Parent=gene-PYH62_01205;Dbxref=NCBI_GP:WHI79490.1;Name=WHI79490.1;Ontology_term=GO:0015716,GO:0005524,GO:0015416,GO:0009898,GO:0055052;gbkey=CDS;gene=phnC;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832011.1;locus_tag=PYH62_01205;product=phosphonate ABC transporter ATP-binding protein;protein_id=WHI79490.1;transl_table=11 CP118825.1 Genbank gene 241995 242795 . + . ID=gene-PYH62_01210;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=PYH62_01210 CP118825.1 Protein Homology CDS 241995 242795 . + 0 ID=cds-WHI79491.1;Parent=gene-PYH62_01210;Dbxref=NCBI_GP:WHI79491.1;Name=WHI79491.1;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494945.1;locus_tag=PYH62_01210;product=phosphonate ABC transporter%2C permease protein PhnE;protein_id=WHI79491.1;transl_table=11 CP118825.1 Genbank pseudogene 242792 243620 . + . ID=gene-PYH62_01215;Name=phnE;gbkey=Gene;gene=phnE;gene_biotype=pseudogene;locus_tag=PYH62_01215;pseudo=true CP118825.1 Protein Homology CDS 242792 243620 . + 0 ID=cds-PYH62_01215;Parent=gene-PYH62_01215;Note=frameshifted;Ontology_term=GO:0015716,GO:0015416,GO:0005886,GO:0055052;gbkey=CDS;gene=phnE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type phosphonate transporter activity|0015416||IEA;go_process=organic phosphonate transport|0015716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498702.1;locus_tag=PYH62_01215;product=phosphonate ABC transporter%2C permease protein PhnE;pseudo=true;transl_table=11 CP118825.1 Genbank gene 243941 244066 . - . ID=gene-PYH62_01220;Name=PYH62_01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01220 CP118825.1 GeneMarkS-2+ CDS 243941 244066 . - 0 ID=cds-WHI79492.1;Parent=gene-PYH62_01220;Dbxref=NCBI_GP:WHI79492.1;Name=WHI79492.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_01220;product=hypothetical protein;protein_id=WHI79492.1;transl_table=11 CP118825.1 Genbank gene 244709 245191 . + . ID=gene-PYH62_01225;Name=PYH62_01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01225 CP118825.1 Protein Homology CDS 244709 245191 . + 0 ID=cds-WHI79493.1;Parent=gene-PYH62_01225;Dbxref=NCBI_GP:WHI79493.1;Name=WHI79493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449467.1;locus_tag=PYH62_01225;product=GNAT family N-acetyltransferase;protein_id=WHI79493.1;transl_table=11 CP118825.1 Genbank gene 245208 245684 . + . ID=gene-PYH62_01230;Name=PYH62_01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01230 CP118825.1 Protein Homology CDS 245208 245684 . + 0 ID=cds-WHI79494.1;Parent=gene-PYH62_01230;Dbxref=NCBI_GP:WHI79494.1;Name=WHI79494.1;Ontology_term=GO:0008113;gbkey=CDS;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175494.1;locus_tag=PYH62_01230;product=peptide-methionine (S)-S-oxide reductase;protein_id=WHI79494.1;transl_table=11 CP118825.1 Genbank gene 245735 246088 . - . ID=gene-PYH62_01235;Name=PYH62_01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01235 CP118825.1 Protein Homology CDS 245735 246088 . - 0 ID=cds-WHI79495.1;Parent=gene-PYH62_01235;Dbxref=NCBI_GP:WHI79495.1;Name=WHI79495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437887.1;locus_tag=PYH62_01235;product=hypothetical protein;protein_id=WHI79495.1;transl_table=11 CP118825.1 Genbank gene 246226 246579 . - . ID=gene-PYH62_01240;Name=PYH62_01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01240 CP118825.1 Protein Homology CDS 246226 246579 . - 0 ID=cds-WHI79496.1;Parent=gene-PYH62_01240;Dbxref=NCBI_GP:WHI79496.1;Name=WHI79496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449545.1;locus_tag=PYH62_01240;product=DoxX family protein;protein_id=WHI79496.1;transl_table=11 CP118825.1 Genbank gene 246792 247970 . + . ID=gene-PYH62_01245;Name=PYH62_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01245 CP118825.1 Protein Homology CDS 246792 247970 . + 0 ID=cds-WHI79497.1;Parent=gene-PYH62_01245;Dbxref=NCBI_GP:WHI79497.1;Name=WHI79497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834759.1;locus_tag=PYH62_01245;product=MFS transporter;protein_id=WHI79497.1;transl_table=11 CP118825.1 Genbank gene 248072 248239 . - . ID=gene-PYH62_01250;Name=PYH62_01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01250 CP118825.1 Protein Homology CDS 248072 248239 . - 0 ID=cds-WHI79498.1;Parent=gene-PYH62_01250;Dbxref=NCBI_GP:WHI79498.1;Name=WHI79498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175491.1;locus_tag=PYH62_01250;product=hypothetical protein;protein_id=WHI79498.1;transl_table=11 CP118825.1 Genbank gene 248493 249377 . - . ID=gene-PYH62_01255;Name=PYH62_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01255 CP118825.1 Protein Homology CDS 248493 249377 . - 0 ID=cds-WHI79499.1;Parent=gene-PYH62_01255;Dbxref=NCBI_GP:WHI79499.1;Name=WHI79499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449315.1;locus_tag=PYH62_01255;product=LysR family transcriptional regulator;protein_id=WHI79499.1;transl_table=11 CP118825.1 Genbank gene 249634 250245 . + . ID=gene-PYH62_01260;Name=PYH62_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01260 CP118825.1 Protein Homology CDS 249634 250245 . + 0 ID=cds-WHI79500.1;Parent=gene-PYH62_01260;Dbxref=NCBI_GP:WHI79500.1;Name=WHI79500.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834763.1;locus_tag=PYH62_01260;product=metallophosphoesterase;protein_id=WHI79500.1;transl_table=11 CP118825.1 Genbank gene 250364 252559 . + . ID=gene-PYH62_01265;Name=PYH62_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01265 CP118825.1 Protein Homology CDS 250364 252559 . + 0 ID=cds-WHI79501.1;Parent=gene-PYH62_01265;Dbxref=NCBI_GP:WHI79501.1;Name=WHI79501.1;Ontology_term=GO:0009986;gbkey=CDS;go_component=cell surface|0009986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175488.1;locus_tag=PYH62_01265;product=LPXTG cell wall anchor domain-containing protein;protein_id=WHI79501.1;transl_table=11 CP118825.1 Genbank gene 252833 254410 . + . ID=gene-PYH62_01270;Name=PYH62_01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01270 CP118825.1 Protein Homology CDS 252833 254410 . + 0 ID=cds-WHI79502.1;Parent=gene-PYH62_01270;Dbxref=NCBI_GP:WHI79502.1;Name=WHI79502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175487.1;locus_tag=PYH62_01270;product=YfcC family protein;protein_id=WHI79502.1;transl_table=11 CP118825.1 Genbank gene 254465 256663 . - . ID=gene-PYH62_01275;Name=PYH62_01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01275 CP118825.1 Protein Homology CDS 254465 256663 . - 0 ID=cds-WHI79503.1;Parent=gene-PYH62_01275;Dbxref=NCBI_GP:WHI79503.1;Name=WHI79503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449270.1;locus_tag=PYH62_01275;product=amidase domain-containing protein;protein_id=WHI79503.1;transl_table=11 CP118825.1 Genbank gene 256928 259756 . + . ID=gene-PYH62_01280;Name=PYH62_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01280 CP118825.1 Protein Homology CDS 256928 259756 . + 0 ID=cds-WHI79504.1;Parent=gene-PYH62_01280;Dbxref=NCBI_GP:WHI79504.1;Name=WHI79504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834639.1;locus_tag=PYH62_01280;product=YhgE/Pip domain-containing protein;protein_id=WHI79504.1;transl_table=11 CP118825.1 Genbank gene 259812 260318 . - . ID=gene-PYH62_01285;Name=PYH62_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01285 CP118825.1 Protein Homology CDS 259812 260318 . - 0 ID=cds-WHI79505.1;Parent=gene-PYH62_01285;Dbxref=NCBI_GP:WHI79505.1;Name=WHI79505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449509.1;locus_tag=PYH62_01285;product=hypothetical protein;protein_id=WHI79505.1;transl_table=11 CP118825.1 Genbank gene 260521 261042 . + . ID=gene-PYH62_01290;Name=PYH62_01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01290 CP118825.1 Protein Homology CDS 260521 261042 . + 0 ID=cds-WHI79506.1;Parent=gene-PYH62_01290;Dbxref=NCBI_GP:WHI79506.1;Name=WHI79506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449373.1;locus_tag=PYH62_01290;product=hypothetical protein;protein_id=WHI79506.1;transl_table=11 CP118825.1 Genbank gene 261088 261372 . - . ID=gene-PYH62_01295;Name=PYH62_01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01295 CP118825.1 Protein Homology CDS 261088 261372 . - 0 ID=cds-WHI79507.1;Parent=gene-PYH62_01295;Dbxref=NCBI_GP:WHI79507.1;Name=WHI79507.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020438.2;locus_tag=PYH62_01295;product=YolD-like family protein;protein_id=WHI79507.1;transl_table=11 CP118825.1 Genbank gene 261568 262680 . + . ID=gene-PYH62_01300;Name=PYH62_01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01300 CP118825.1 Protein Homology CDS 261568 262680 . + 0 ID=cds-WHI79508.1;Parent=gene-PYH62_01300;Dbxref=NCBI_GP:WHI79508.1;Name=WHI79508.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485872.1;locus_tag=PYH62_01300;product=tyrosine-type recombinase/integrase;protein_id=WHI79508.1;transl_table=11 CP118825.1 Genbank gene 262683 264746 . + . ID=gene-PYH62_01305;Name=PYH62_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01305 CP118825.1 Protein Homology CDS 262683 264746 . + 0 ID=cds-WHI79509.1;Parent=gene-PYH62_01305;Dbxref=NCBI_GP:WHI79509.1;Name=WHI79509.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000026849.1;locus_tag=PYH62_01305;product=tyrosine-type recombinase/integrase;protein_id=WHI79509.1;transl_table=11 CP118825.1 Genbank gene 264755 265120 . + . ID=gene-PYH62_01310;Name=PYH62_01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01310 CP118825.1 Protein Homology CDS 264755 265120 . + 0 ID=cds-WHI79510.1;Parent=gene-PYH62_01310;Dbxref=NCBI_GP:WHI79510.1;Name=WHI79510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000410574.1;locus_tag=PYH62_01310;product=DUF6262 family protein;protein_id=WHI79510.1;transl_table=11 CP118825.1 Genbank gene 265149 265559 . - . ID=gene-PYH62_01315;Name=PYH62_01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01315 CP118825.1 Protein Homology CDS 265149 265559 . - 0 ID=cds-WHI79511.1;Parent=gene-PYH62_01315;Dbxref=NCBI_GP:WHI79511.1;Name=WHI79511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000612779.1;locus_tag=PYH62_01315;product=YolD-like family protein;protein_id=WHI79511.1;transl_table=11 CP118825.1 Genbank gene 265873 266718 . - . ID=gene-PYH62_01320;Name=blaZ;gbkey=Gene;gene=blaZ;gene_biotype=protein_coding;locus_tag=PYH62_01320 CP118825.1 Protein Homology CDS 265873 266718 . - 0 ID=cds-WHI79512.1;Parent=gene-PYH62_01320;Dbxref=NCBI_GP:WHI79512.1;Name=WHI79512.1;gbkey=CDS;gene=blaZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000733274.1;locus_tag=PYH62_01320;product=penicillin-hydrolyzing class A beta-lactamase BlaZ;protein_id=WHI79512.1;transl_table=11 CP118825.1 Genbank gene 266825 268582 . + . ID=gene-PYH62_01325;Name=blaR1;gbkey=Gene;gene=blaR1;gene_biotype=protein_coding;locus_tag=PYH62_01325 CP118825.1 Protein Homology CDS 266825 268582 . + 0 ID=cds-WHI79513.1;Parent=gene-PYH62_01325;Dbxref=NCBI_GP:WHI79513.1;Name=WHI79513.1;gbkey=CDS;gene=blaR1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096376.1;locus_tag=PYH62_01325;product=beta-lactam sensor/signal transducer BlaR1;protein_id=WHI79513.1;transl_table=11 CP118825.1 Genbank gene 268572 268952 . + . ID=gene-PYH62_01330;Name=blaI;gbkey=Gene;gene=blaI;gene_biotype=protein_coding;locus_tag=PYH62_01330 CP118825.1 Protein Homology CDS 268572 268952 . + 0 ID=cds-WHI79514.1;Parent=gene-PYH62_01330;Dbxref=NCBI_GP:WHI79514.1;Name=WHI79514.1;Ontology_term=GO:0045892;gbkey=CDS;gene=blaI;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001284656.1;locus_tag=PYH62_01330;product=penicillinase repressor BlaI;protein_id=WHI79514.1;transl_table=11 CP118825.1 Genbank pseudogene 269040 269147 . - . ID=gene-PYH62_01335;Name=PYH62_01335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_01335;pseudo=true CP118825.1 Protein Homology CDS 269040 269147 . - 0 ID=cds-PYH62_01335;Parent=gene-PYH62_01335;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492510.1;locus_tag=PYH62_01335;product=hypothetical protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 269479 270003 . + . ID=gene-PYH62_01340;Name=PYH62_01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01340 CP118825.1 Protein Homology CDS 269479 270003 . + 0 ID=cds-WHI79515.1;Parent=gene-PYH62_01340;Dbxref=NCBI_GP:WHI79515.1;Name=WHI79515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449354.1;locus_tag=PYH62_01340;product=hypothetical protein;protein_id=WHI79515.1;transl_table=11 CP118825.1 Genbank gene 270256 271491 . + . ID=gene-PYH62_01345;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=PYH62_01345 CP118825.1 Protein Homology CDS 270256 271491 . + 0 ID=cds-WHI79516.1;Parent=gene-PYH62_01345;Dbxref=NCBI_GP:WHI79516.1;Name=WHI79516.1;Ontology_term=GO:0019546,GO:0016990;gbkey=CDS;gene=arcA;go_function=arginine deiminase activity|0016990||IEA;go_process=arginine deiminase pathway|0019546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501419.1;locus_tag=PYH62_01345;product=arginine deiminase;protein_id=WHI79516.1;transl_table=11 CP118825.1 Genbank gene 271628 272389 . + . ID=gene-PYH62_01350;Name=PYH62_01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01350 CP118825.1 Protein Homology CDS 271628 272389 . + 0 ID=cds-WHI79517.1;Parent=gene-PYH62_01350;Dbxref=NCBI_GP:WHI79517.1;Name=WHI79517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449540.1;locus_tag=PYH62_01350;product=alpha/beta hydrolase family protein;protein_id=WHI79517.1;transl_table=11 CP118825.1 Genbank gene 272435 272563 . - . ID=gene-PYH62_01355;Name=PYH62_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01355 CP118825.1 Protein Homology CDS 272435 272563 . - 0 ID=cds-WHI79518.1;Parent=gene-PYH62_01355;Dbxref=NCBI_GP:WHI79518.1;Name=WHI79518.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021221.2;locus_tag=PYH62_01355;product=DUF4870 domain-containing protein;protein_id=WHI79518.1;transl_table=11 CP118825.1 Genbank gene 272871 273953 . + . ID=gene-PYH62_01360;Name=PYH62_01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01360 CP118825.1 Protein Homology CDS 272871 273953 . + 0 ID=cds-WHI80220.1;Parent=gene-PYH62_01360;Dbxref=NCBI_GP:WHI80220.1;Name=WHI80220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488246.1;locus_tag=PYH62_01360;product=CapA family protein;protein_id=WHI80220.1;transl_table=11 CP118825.1 Genbank gene 274034 275674 . - . ID=gene-PYH62_01365;Name=PYH62_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01365 CP118825.1 Protein Homology CDS 274034 275674 . - 0 ID=cds-WHI79519.1;Parent=gene-PYH62_01365;Dbxref=NCBI_GP:WHI79519.1;Name=WHI79519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000813558.1;locus_tag=PYH62_01365;product=alpha-keto acid decarboxylase family protein;protein_id=WHI79519.1;transl_table=11 CP118825.1 Genbank gene 275822 276277 . + . ID=gene-PYH62_01370;Name=PYH62_01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01370 CP118825.1 Protein Homology CDS 275822 276277 . + 0 ID=cds-WHI79520.1;Parent=gene-PYH62_01370;Dbxref=NCBI_GP:WHI79520.1;Name=WHI79520.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501412.1;locus_tag=PYH62_01370;product=MarR family transcriptional regulator;protein_id=WHI79520.1;transl_table=11 CP118825.1 Genbank gene 276439 277902 . + . ID=gene-PYH62_01375;Name=PYH62_01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01375 CP118825.1 Protein Homology CDS 276439 277902 . + 0 ID=cds-WHI79521.1;Parent=gene-PYH62_01375;Dbxref=NCBI_GP:WHI79521.1;Name=WHI79521.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017697.2;locus_tag=PYH62_01375;product=poly-gamma-glutamate hydrolase family protein;protein_id=WHI79521.1;transl_table=11 CP118825.1 Genbank gene 278244 278402 . + . ID=gene-PYH62_01380;Name=PYH62_01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01380 CP118825.1 Protein Homology CDS 278244 278402 . + 0 ID=cds-WHI79522.1;Parent=gene-PYH62_01380;Dbxref=NCBI_GP:WHI79522.1;Name=WHI79522.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018766.2;locus_tag=PYH62_01380;product=hypothetical protein;protein_id=WHI79522.1;transl_table=11 CP118825.1 Genbank gene 278399 278677 . + . ID=gene-PYH62_01385;Name=PYH62_01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01385 CP118825.1 Protein Homology CDS 278399 278677 . + 0 ID=cds-WHI79523.1;Parent=gene-PYH62_01385;Dbxref=NCBI_GP:WHI79523.1;Name=WHI79523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834618.1;locus_tag=PYH62_01385;product=hypothetical protein;protein_id=WHI79523.1;transl_table=11 CP118825.1 Genbank gene 278837 278938 . + . ID=gene-PYH62_01390;Name=PYH62_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01390 CP118825.1 Protein Homology CDS 278837 278938 . + 0 ID=cds-WHI79524.1;Parent=gene-PYH62_01390;Dbxref=NCBI_GP:WHI79524.1;Name=WHI79524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016898541.1;locus_tag=PYH62_01390;product=SE2200 family small protein;protein_id=WHI79524.1;transl_table=11 CP118825.1 Genbank gene 279117 280844 . - . ID=gene-PYH62_01395;Name=PYH62_01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01395 CP118825.1 Protein Homology CDS 279117 280844 . - 0 ID=cds-WHI79525.1;Parent=gene-PYH62_01395;Dbxref=NCBI_GP:WHI79525.1;Name=WHI79525.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830915.1;locus_tag=PYH62_01395;product=IS1182 family transposase;protein_id=WHI79525.1;transl_table=11 CP118825.1 Genbank pseudogene 281182 282658 . - . ID=gene-PYH62_01400;Name=PYH62_01400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_01400;pseudo=true CP118825.1 Protein Homology CDS 281182 282658 . - 0 ID=cds-PYH62_01400;Parent=gene-PYH62_01400;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488271.1;locus_tag=PYH62_01400;product=alkaline phosphatase;pseudo=true;transl_table=11 CP118825.1 cmsearch riboswitch 282867 282968 . + . ID=id-CP118825.1:282867..282968;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch CP118825.1 Genbank gene 283040 283213 . + . ID=gene-PYH62_01405;Name=PYH62_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01405 CP118825.1 Protein Homology CDS 283040 283213 . + 0 ID=cds-WHI79526.1;Parent=gene-PYH62_01405;Dbxref=NCBI_GP:WHI79526.1;Name=WHI79526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175468.1;locus_tag=PYH62_01405;product=hypothetical protein;protein_id=WHI79526.1;transl_table=11 CP118825.1 Genbank gene 283382 283549 . + . ID=gene-PYH62_01410;Name=PYH62_01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01410 CP118825.1 Protein Homology CDS 283382 283549 . + 0 ID=cds-WHI79527.1;Parent=gene-PYH62_01410;Dbxref=NCBI_GP:WHI79527.1;Name=WHI79527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488268.1;locus_tag=PYH62_01410;product=hypothetical protein;protein_id=WHI79527.1;transl_table=11 CP118825.1 Genbank gene 283562 284227 . + . ID=gene-PYH62_01415;Name=PYH62_01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01415 CP118825.1 Protein Homology CDS 283562 284227 . + 0 ID=cds-WHI79528.1;Parent=gene-PYH62_01415;Dbxref=NCBI_GP:WHI79528.1;Name=WHI79528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501407.1;locus_tag=PYH62_01415;product=response regulator transcription factor;protein_id=WHI79528.1;transl_table=11 CP118825.1 Genbank gene 284233 285129 . + . ID=gene-PYH62_01420;Name=PYH62_01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01420 CP118825.1 Protein Homology CDS 284233 285129 . + 0 ID=cds-WHI79529.1;Parent=gene-PYH62_01420;Dbxref=NCBI_GP:WHI79529.1;Name=WHI79529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834601.1;locus_tag=PYH62_01420;product=sensor histidine kinase;protein_id=WHI79529.1;transl_table=11 CP118825.1 Genbank gene 285261 286010 . + . ID=gene-PYH62_01425;Name=PYH62_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01425 CP118825.1 Protein Homology CDS 285261 286010 . + 0 ID=cds-WHI80221.1;Parent=gene-PYH62_01425;Dbxref=NCBI_GP:WHI80221.1;Name=WHI80221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495981.1;locus_tag=PYH62_01425;product=ABC transporter ATP-binding protein;protein_id=WHI80221.1;transl_table=11 CP118825.1 Genbank gene 286012 287967 . + . ID=gene-PYH62_01430;Name=PYH62_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01430 CP118825.1 Protein Homology CDS 286012 287967 . + 0 ID=cds-WHI79530.1;Parent=gene-PYH62_01430;Dbxref=NCBI_GP:WHI79530.1;Name=WHI79530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930645.1;locus_tag=PYH62_01430;product=FtsX-like permease family protein;protein_id=WHI79530.1;transl_table=11 CP118825.1 Genbank gene 288059 288823 . + . ID=gene-PYH62_01435;Name=PYH62_01435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01435 CP118825.1 Protein Homology CDS 288059 288823 . + 0 ID=cds-WHI79531.1;Parent=gene-PYH62_01435;Dbxref=NCBI_GP:WHI79531.1;Name=WHI79531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449398.1;locus_tag=PYH62_01435;product=DUF4064 domain-containing protein;protein_id=WHI79531.1;transl_table=11 CP118825.1 Genbank gene 288919 290211 . - . ID=gene-PYH62_01440;Name=PYH62_01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01440 CP118825.1 Protein Homology CDS 288919 290211 . - 0 ID=cds-WHI79532.1;Parent=gene-PYH62_01440;Dbxref=NCBI_GP:WHI79532.1;Name=WHI79532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834597.1;locus_tag=PYH62_01440;product=LLM class flavin-dependent oxidoreductase;protein_id=WHI79532.1;transl_table=11 CP118825.1 Genbank gene 290275 291024 . - . ID=gene-PYH62_01445;Name=PYH62_01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01445 CP118825.1 Protein Homology CDS 290275 291024 . - 0 ID=cds-WHI79533.1;Parent=gene-PYH62_01445;Dbxref=NCBI_GP:WHI79533.1;Name=WHI79533.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486827.1;locus_tag=PYH62_01445;product=3-oxoacyl-ACP reductase;protein_id=WHI79533.1;transl_table=11 CP118825.1 cmsearch riboswitch 291148 291249 . - . ID=id-CP118825.1:291148..291249;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch CP118825.1 Genbank gene 291517 293109 . + . ID=gene-PYH62_01450;Name=PYH62_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01450 CP118825.1 Protein Homology CDS 291517 293109 . + 0 ID=cds-WHI79534.1;Parent=gene-PYH62_01450;Dbxref=NCBI_GP:WHI79534.1;Name=WHI79534.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830676.1;locus_tag=PYH62_01450;product=solute:sodium symporter family transporter;protein_id=WHI79534.1;transl_table=11 CP118825.1 Genbank pseudogene 293200 294403 . + . ID=gene-PYH62_01455;Name=PYH62_01455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_01455;pseudo=true CP118825.1 Protein Homology CDS 293200 294403 . + 0 ID=cds-PYH62_01455;Parent=gene-PYH62_01455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835191.1;locus_tag=PYH62_01455;product=5%2C10-methylene-tetrahydrofolate dehydrogenase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 294400 295506 . + . ID=gene-PYH62_01460;Name=PYH62_01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01460 CP118825.1 Protein Homology CDS 294400 295506 . + 0 ID=cds-WHI79535.1;Parent=gene-PYH62_01460;Dbxref=NCBI_GP:WHI79535.1;Name=WHI79535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454780.1;locus_tag=PYH62_01460;product=5%2C10-methylene-tetrahydrofolate dehydrogenase;protein_id=WHI79535.1;transl_table=11 CP118825.1 Genbank gene 296010 296741 . + . ID=gene-PYH62_01465;Name=PYH62_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01465 CP118825.1 Protein Homology CDS 296010 296741 . + 0 ID=cds-WHI79536.1;Parent=gene-PYH62_01465;Dbxref=NCBI_GP:WHI79536.1;Name=WHI79536.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274739.1;locus_tag=PYH62_01465;product=phosphoadenylyl-sulfate reductase;protein_id=WHI79536.1;transl_table=11 CP118825.1 Genbank gene 296905 298758 . + . ID=gene-PYH62_01470;Name=PYH62_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01470 CP118825.1 Protein Homology CDS 296905 298758 . + 0 ID=cds-WHI79537.1;Parent=gene-PYH62_01470;Dbxref=NCBI_GP:WHI79537.1;Name=WHI79537.1;Ontology_term=GO:0006790,GO:0004783,GO:0009337;gbkey=CDS;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490455.1;locus_tag=PYH62_01470;product=assimilatory sulfite reductase (NADPH) flavoprotein subunit;protein_id=WHI79537.1;transl_table=11 CP118825.1 Genbank gene 298777 300498 . + . ID=gene-PYH62_01475;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=PYH62_01475 CP118825.1 Protein Homology CDS 298777 300498 . + 0 ID=cds-WHI79538.1;Parent=gene-PYH62_01475;Dbxref=NCBI_GP:WHI79538.1;Name=WHI79538.1;Ontology_term=GO:0000103,GO:0004783;gbkey=CDS;gene=cysI;go_function=sulfite reductase (NADPH) activity|0004783||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835188.1;locus_tag=PYH62_01475;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WHI79538.1;transl_table=11 CP118825.1 Genbank gene 300534 301298 . + . ID=gene-PYH62_01480;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=PYH62_01480 CP118825.1 Protein Homology CDS 300534 301298 . + 0 ID=cds-WHI79539.1;Parent=gene-PYH62_01480;Dbxref=NCBI_GP:WHI79539.1;Name=WHI79539.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449255.1;locus_tag=PYH62_01480;product=uroporphyrinogen-III C-methyltransferase;protein_id=WHI79539.1;transl_table=11 CP118825.1 Genbank gene 301332 301943 . + . ID=gene-PYH62_01485;Name=PYH62_01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01485 CP118825.1 Protein Homology CDS 301332 301943 . + 0 ID=cds-WHI79540.1;Parent=gene-PYH62_01485;Dbxref=NCBI_GP:WHI79540.1;Name=WHI79540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835186.1;locus_tag=PYH62_01485;product=NAD(P)-binding protein;protein_id=WHI79540.1;transl_table=11 CP118825.1 Genbank gene 301965 302840 . + . ID=gene-PYH62_01490;Name=PYH62_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01490 CP118825.1 Protein Homology CDS 301965 302840 . + 0 ID=cds-WHI79541.1;Parent=gene-PYH62_01490;Dbxref=NCBI_GP:WHI79541.1;Name=WHI79541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488196.1;locus_tag=PYH62_01490;product=sulfite exporter TauE/SafE family protein;protein_id=WHI79541.1;transl_table=11 CP118825.1 Genbank gene 302886 304064 . + . ID=gene-PYH62_01495;Name=sat;gbkey=Gene;gene=sat;gene_biotype=protein_coding;locus_tag=PYH62_01495 CP118825.1 Protein Homology CDS 302886 304064 . + 0 ID=cds-WHI79542.1;Parent=gene-PYH62_01495;Dbxref=NCBI_GP:WHI79542.1;Name=WHI79542.1;Ontology_term=GO:0004781;gbkey=CDS;gene=sat;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438012.1;locus_tag=PYH62_01495;product=sulfate adenylyltransferase;protein_id=WHI79542.1;transl_table=11 CP118825.1 Genbank gene 304083 304682 . + . ID=gene-PYH62_01500;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=PYH62_01500 CP118825.1 Protein Homology CDS 304083 304682 . + 0 ID=cds-WHI79543.1;Parent=gene-PYH62_01500;Dbxref=NCBI_GP:WHI79543.1;Name=WHI79543.1;Ontology_term=GO:0006790,GO:0004020;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274746.1;locus_tag=PYH62_01500;product=adenylyl-sulfate kinase;protein_id=WHI79543.1;transl_table=11 CP118825.1 Genbank gene 305110 305883 . + . ID=gene-PYH62_01505;Name=PYH62_01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01505 CP118825.1 Protein Homology CDS 305110 305883 . + 0 ID=cds-WHI79544.1;Parent=gene-PYH62_01505;Dbxref=NCBI_GP:WHI79544.1;Name=WHI79544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449208.1;locus_tag=PYH62_01505;product=CHAP domain-containing protein;protein_id=WHI79544.1;transl_table=11 CP118825.1 Genbank gene 306087 306329 . + . ID=gene-PYH62_01510;Name=PYH62_01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01510 CP118825.1 Protein Homology CDS 306087 306329 . + 0 ID=cds-WHI79545.1;Parent=gene-PYH62_01510;Dbxref=NCBI_GP:WHI79545.1;Name=WHI79545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449304.1;locus_tag=PYH62_01510;product=hypothetical protein;protein_id=WHI79545.1;transl_table=11 CP118825.1 Genbank pseudogene 306495 307788 . + . ID=gene-PYH62_01515;Name=PYH62_01515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_01515;pseudo=true CP118825.1 Protein Homology CDS 306495 307788 . + 0 ID=cds-PYH62_01515;Parent=gene-PYH62_01515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830664.1;locus_tag=PYH62_01515;product=anaerobic C4-dicarboxylate transporter family protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 308219 309841 . + . ID=gene-PYH62_01520;Name=PYH62_01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01520 CP118825.1 Protein Homology CDS 308219 309841 . + 0 ID=cds-WHI79546.1;Parent=gene-PYH62_01520;Dbxref=NCBI_GP:WHI79546.1;Name=WHI79546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501390.2;locus_tag=PYH62_01520;product=BCCT family transporter;protein_id=WHI79546.1;transl_table=11 CP118825.1 Genbank pseudogene 310140 311817 . + . ID=gene-PYH62_01525;Name=PYH62_01525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_01525;pseudo=true CP118825.1 Protein Homology CDS 310140 311817 . + 0 ID=cds-PYH62_01525;Parent=gene-PYH62_01525;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494449.1;locus_tag=PYH62_01525;product=IS1182 family transposase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 311836 312390 . - . ID=gene-PYH62_01530;Name=PYH62_01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01530 CP118825.1 Protein Homology CDS 311836 312390 . - 0 ID=cds-WHI79547.1;Parent=gene-PYH62_01530;Dbxref=NCBI_GP:WHI79547.1;Name=WHI79547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835178.1;locus_tag=PYH62_01530;product=GbsR/MarR family transcriptional regulator;protein_id=WHI79547.1;transl_table=11 CP118825.1 Genbank pseudogene 312630 314121 . + . ID=gene-PYH62_01535;Name=betB;gbkey=Gene;gene=betB;gene_biotype=pseudogene;locus_tag=PYH62_01535;pseudo=true CP118825.1 Protein Homology CDS 312630 314121 . + 0 ID=cds-PYH62_01535;Parent=gene-PYH62_01535;Note=frameshifted;Ontology_term=GO:0006578,GO:0008802;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase activity|0008802||IEA;go_process=amino-acid betaine biosynthetic process|0006578||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501386.1;locus_tag=PYH62_01535;product=betaine-aldehyde dehydrogenase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 314258 315964 . + . ID=gene-PYH62_01540;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=PYH62_01540 CP118825.1 Protein Homology CDS 314258 315964 . + 0 ID=cds-WHI79548.1;Parent=gene-PYH62_01540;Dbxref=NCBI_GP:WHI79548.1;Name=WHI79548.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274755.1;locus_tag=PYH62_01540;product=choline dehydrogenase;protein_id=WHI79548.1;transl_table=11 CP118825.1 Genbank gene 316094 317275 . + . ID=gene-PYH62_01545;Name=PYH62_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01545 CP118825.1 Protein Homology CDS 316094 317275 . + 0 ID=cds-WHI79549.1;Parent=gene-PYH62_01545;Dbxref=NCBI_GP:WHI79549.1;Name=WHI79549.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175441.1;locus_tag=PYH62_01545;product=amidohydrolase;protein_id=WHI79549.1;transl_table=11 CP118825.1 Genbank gene 317399 317605 . + . ID=gene-PYH62_01550;Name=PYH62_01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01550 CP118825.1 Protein Homology CDS 317399 317605 . + 0 ID=cds-WHI79550.1;Parent=gene-PYH62_01550;Dbxref=NCBI_GP:WHI79550.1;Name=WHI79550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449386.1;locus_tag=PYH62_01550;product=YozE family protein;protein_id=WHI79550.1;transl_table=11 CP118825.1 Genbank gene 317668 318162 . + . ID=gene-PYH62_01555;Name=PYH62_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01555 CP118825.1 Protein Homology CDS 317668 318162 . + 0 ID=cds-WHI79551.1;Parent=gene-PYH62_01555;Dbxref=NCBI_GP:WHI79551.1;Name=WHI79551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454796.1;locus_tag=PYH62_01555;product=antibiotic biosynthesis monooxygenase;protein_id=WHI79551.1;transl_table=11 CP118825.1 Genbank gene 318294 319886 . + . ID=gene-PYH62_01560;Name=PYH62_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01560 CP118825.1 Protein Homology CDS 318294 319886 . + 0 ID=cds-WHI79552.1;Parent=gene-PYH62_01560;Dbxref=NCBI_GP:WHI79552.1;Name=WHI79552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449501.1;locus_tag=PYH62_01560;product=acyl--CoA ligase;protein_id=WHI79552.1;transl_table=11 CP118825.1 Genbank gene 320100 322724 . + . ID=gene-PYH62_01565;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=PYH62_01565 CP118825.1 Protein Homology CDS 320100 322724 . + 0 ID=cds-WHI79553.1;Parent=gene-PYH62_01565;Dbxref=NCBI_GP:WHI79553.1;Name=WHI79553.1;Ontology_term=GO:0015976,GO:0050242;gbkey=CDS;gene=ppdK;go_function=pyruvate%2C phosphate dikinase activity|0050242||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454797.1;locus_tag=PYH62_01565;product=pyruvate%2C phosphate dikinase;protein_id=WHI79553.1;transl_table=11 CP118825.1 Genbank gene 322731 323561 . + . ID=gene-PYH62_01570;Name=PYH62_01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01570 CP118825.1 Protein Homology CDS 322731 323561 . + 0 ID=cds-WHI79554.1;Parent=gene-PYH62_01570;Dbxref=NCBI_GP:WHI79554.1;Name=WHI79554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449455.1;locus_tag=PYH62_01570;product=kinase/pyrophosphorylase;protein_id=WHI79554.1;transl_table=11 CP118825.1 Genbank gene 323876 325378 . + . ID=gene-PYH62_01575;Name=lqo;gbkey=Gene;gene=lqo;gene_biotype=protein_coding;locus_tag=PYH62_01575 CP118825.1 Protein Homology CDS 323876 325378 . + 0 ID=cds-WHI79555.1;Parent=gene-PYH62_01575;Dbxref=NCBI_GP:WHI79555.1;Name=WHI79555.1;gbkey=CDS;gene=lqo;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835172.1;locus_tag=PYH62_01575;product=L-lactate dehydrogenase (quinone);protein_id=WHI79555.1;transl_table=11 CP118825.1 Genbank gene 325520 326410 . - . ID=gene-PYH62_01580;Name=PYH62_01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01580 CP118825.1 Protein Homology CDS 325520 326410 . - 0 ID=cds-WHI79556.1;Parent=gene-PYH62_01580;Dbxref=NCBI_GP:WHI79556.1;Name=WHI79556.1;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478556.1;locus_tag=PYH62_01580;product=fructose bisphosphate aldolase;protein_id=WHI79556.1;transl_table=11 CP118825.1 Genbank gene 326587 327078 . + . ID=gene-PYH62_01585;Name=PYH62_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01585 CP118825.1 Protein Homology CDS 326587 327078 . + 0 ID=cds-WHI79557.1;Parent=gene-PYH62_01585;Dbxref=NCBI_GP:WHI79557.1;Name=WHI79557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835171.1;locus_tag=PYH62_01585;product=topology modulation protein;protein_id=WHI79557.1;transl_table=11 CP118825.1 Genbank gene 327271 328605 . + . ID=gene-PYH62_01590;Name=PYH62_01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01590 CP118825.1 Protein Homology CDS 327271 328605 . + 0 ID=cds-WHI79558.1;Parent=gene-PYH62_01590;Dbxref=NCBI_GP:WHI79558.1;Name=WHI79558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454799.1;locus_tag=PYH62_01590;product=putative glycoside hydrolase;protein_id=WHI79558.1;transl_table=11 CP118825.1 Genbank gene 328762 329385 . - . ID=gene-PYH62_01595;Name=PYH62_01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01595 CP118825.1 Protein Homology CDS 328762 329385 . - 0 ID=cds-WHI79559.1;Parent=gene-PYH62_01595;Dbxref=NCBI_GP:WHI79559.1;Name=WHI79559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835169.1;locus_tag=PYH62_01595;product=LPXTG cell wall anchor domain-containing protein;protein_id=WHI79559.1;transl_table=11 CP118825.1 Genbank gene 329552 329977 . - . ID=gene-PYH62_01600;Name=PYH62_01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01600 CP118825.1 Protein Homology CDS 329552 329977 . - 0 ID=cds-WHI79560.1;Parent=gene-PYH62_01600;Dbxref=NCBI_GP:WHI79560.1;Name=WHI79560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449431.1;locus_tag=PYH62_01600;product=hypothetical protein;protein_id=WHI79560.1;transl_table=11 CP118825.1 cmsearch riboswitch 330124 330230 . + . ID=id-CP118825.1:330124..330230;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch CP118825.1 Genbank gene 330339 331154 . + . ID=gene-PYH62_01605;Name=PYH62_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01605 CP118825.1 Protein Homology CDS 330339 331154 . + 0 ID=cds-WHI79561.1;Parent=gene-PYH62_01605;Dbxref=NCBI_GP:WHI79561.1;Name=WHI79561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449288.1;locus_tag=PYH62_01605;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WHI79561.1;transl_table=11 CP118825.1 Genbank gene 331357 332694 . + . ID=gene-PYH62_01610;Name=PYH62_01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01610 CP118825.1 Protein Homology CDS 331357 332694 . + 0 ID=cds-WHI79562.1;Parent=gene-PYH62_01610;Dbxref=NCBI_GP:WHI79562.1;Name=WHI79562.1;Ontology_term=GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501377.1;locus_tag=PYH62_01610;product=aspartate aminotransferase family protein;protein_id=WHI79562.1;transl_table=11 CP118825.1 Genbank gene 332823 334277 . - . ID=gene-PYH62_01615;Name=PYH62_01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01615 CP118825.1 Protein Homology CDS 332823 334277 . - 0 ID=cds-WHI79563.1;Parent=gene-PYH62_01615;Dbxref=NCBI_GP:WHI79563.1;Name=WHI79563.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024910.2;locus_tag=PYH62_01615;product=APC family permease;protein_id=WHI79563.1;transl_table=11 CP118825.1 Genbank gene 335017 336681 . + . ID=gene-PYH62_01620;Name=alsS;gbkey=Gene;gene=alsS;gene_biotype=protein_coding;locus_tag=PYH62_01620 CP118825.1 Protein Homology CDS 335017 336681 . + 0 ID=cds-WHI79564.1;Parent=gene-PYH62_01620;Dbxref=NCBI_GP:WHI79564.1;Name=WHI79564.1;Ontology_term=GO:0034077,GO:0000287,GO:0003984,GO:0030976;gbkey=CDS;gene=alsS;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=butanediol metabolic process|0034077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500936.1;locus_tag=PYH62_01620;product=acetolactate synthase AlsS;protein_id=WHI79564.1;transl_table=11 CP118825.1 Genbank gene 336711 337415 . + . ID=gene-PYH62_01625;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=PYH62_01625 CP118825.1 Protein Homology CDS 336711 337415 . + 0 ID=cds-WHI79565.1;Parent=gene-PYH62_01625;Dbxref=NCBI_GP:WHI79565.1;Name=WHI79565.1;Ontology_term=GO:0006113,GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=fermentation|0006113||IEA,acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500935.1;locus_tag=PYH62_01625;product=acetolactate decarboxylase;protein_id=WHI79565.1;transl_table=11 CP118825.1 Genbank gene 337541 338473 . + . ID=gene-PYH62_01630;Name=PYH62_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01630 CP118825.1 Protein Homology CDS 337541 338473 . + 0 ID=cds-WHI79566.1;Parent=gene-PYH62_01630;Dbxref=NCBI_GP:WHI79566.1;Name=WHI79566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175102.1;locus_tag=PYH62_01630;product=zinc ribbon domain-containing protein;protein_id=WHI79566.1;transl_table=11 CP118825.1 Genbank gene 338732 339448 . + . ID=gene-PYH62_01635;Name=PYH62_01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01635 CP118825.1 Protein Homology CDS 338732 339448 . + 0 ID=cds-WHI79567.1;Parent=gene-PYH62_01635;Dbxref=NCBI_GP:WHI79567.1;Name=WHI79567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636611.1;locus_tag=PYH62_01635;product=epoxyqueuosine reductase QueH;protein_id=WHI79567.1;transl_table=11 CP118825.1 Genbank gene 339501 339776 . - . ID=gene-PYH62_01640;Name=PYH62_01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01640 CP118825.1 Protein Homology CDS 339501 339776 . - 0 ID=cds-WHI79568.1;Parent=gene-PYH62_01640;Dbxref=NCBI_GP:WHI79568.1;Name=WHI79568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175100.1;locus_tag=PYH62_01640;product=hypothetical protein;protein_id=WHI79568.1;transl_table=11 CP118825.1 Genbank gene 339848 340918 . - . ID=gene-PYH62_01645;Name=PYH62_01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01645 CP118825.1 Protein Homology CDS 339848 340918 . - 0 ID=cds-WHI79569.1;Parent=gene-PYH62_01645;Dbxref=NCBI_GP:WHI79569.1;Name=WHI79569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454807.1;locus_tag=PYH62_01645;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WHI79569.1;transl_table=11 CP118825.1 Genbank gene 341144 341998 . + . ID=gene-PYH62_01650;Name=PYH62_01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01650 CP118825.1 Protein Homology CDS 341144 341998 . + 0 ID=cds-WHI79570.1;Parent=gene-PYH62_01650;Dbxref=NCBI_GP:WHI79570.1;Name=WHI79570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449283.1;locus_tag=PYH62_01650;product=fructosamine kinase family protein;protein_id=WHI79570.1;transl_table=11 CP118825.1 Genbank pseudogene 342051 342224 . + . ID=gene-PYH62_01655;Name=PYH62_01655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_01655;pseudo=true CP118825.1 Protein Homology CDS 342051 342224 . + 0 ID=cds-PYH62_01655;Parent=gene-PYH62_01655;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000616229.1;locus_tag=PYH62_01655;product=glyoxalase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 342316 343185 . - . ID=gene-PYH62_01660;Name=PYH62_01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01660 CP118825.1 Protein Homology CDS 342316 343185 . - 0 ID=cds-WHI79571.1;Parent=gene-PYH62_01660;Dbxref=NCBI_GP:WHI79571.1;Name=WHI79571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175097.1;locus_tag=PYH62_01660;product=DMT family transporter;protein_id=WHI79571.1;transl_table=11 CP118825.1 Genbank gene 343178 343603 . - . ID=gene-PYH62_01665;Name=PYH62_01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01665 CP118825.1 Protein Homology CDS 343178 343603 . - 0 ID=cds-WHI79572.1;Parent=gene-PYH62_01665;Dbxref=NCBI_GP:WHI79572.1;Name=WHI79572.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449463.1;locus_tag=PYH62_01665;product=NUDIX domain-containing protein;protein_id=WHI79572.1;transl_table=11 CP118825.1 Genbank gene 343572 344273 . - . ID=gene-PYH62_01670;Name=PYH62_01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01670 CP118825.1 Protein Homology CDS 343572 344273 . - 0 ID=cds-WHI79573.1;Parent=gene-PYH62_01670;Dbxref=NCBI_GP:WHI79573.1;Name=WHI79573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488257.1;locus_tag=PYH62_01670;product=class I SAM-dependent methyltransferase;protein_id=WHI79573.1;transl_table=11 CP118825.1 Genbank gene 344665 344901 . - . ID=gene-PYH62_01675;Name=PYH62_01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01675 CP118825.1 Protein Homology CDS 344665 344901 . - 0 ID=cds-WHI79574.1;Parent=gene-PYH62_01675;Dbxref=NCBI_GP:WHI79574.1;Name=WHI79574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274805.1;locus_tag=PYH62_01675;product=DUF896 domain-containing protein;protein_id=WHI79574.1;transl_table=11 CP118825.1 Genbank gene 344914 345858 . - . ID=gene-PYH62_01680;Name=PYH62_01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01680 CP118825.1 Protein Homology CDS 344914 345858 . - 0 ID=cds-WHI79575.1;Parent=gene-PYH62_01680;Dbxref=NCBI_GP:WHI79575.1;Name=WHI79575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488215.1;locus_tag=PYH62_01680;product=LLM class oxidoreductase;protein_id=WHI79575.1;transl_table=11 CP118825.1 Genbank gene 346016 346567 . - . ID=gene-PYH62_01685;Name=PYH62_01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01685 CP118825.1 Protein Homology CDS 346016 346567 . - 0 ID=cds-WHI80222.1;Parent=gene-PYH62_01685;Dbxref=NCBI_GP:WHI80222.1;Name=WHI80222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449214.1;locus_tag=PYH62_01685;product=TetR/AcrR family transcriptional regulator;protein_id=WHI80222.1;transl_table=11 CP118825.1 Genbank gene 346872 347930 . + . ID=gene-PYH62_01690;Name=PYH62_01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01690 CP118825.1 Protein Homology CDS 346872 347930 . + 0 ID=cds-WHI79576.1;Parent=gene-PYH62_01690;Dbxref=NCBI_GP:WHI79576.1;Name=WHI79576.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454810.1;locus_tag=PYH62_01690;product=PTS sugar transporter subunit IIC;protein_id=WHI79576.1;transl_table=11 CP118825.1 Genbank gene 348041 349465 . + . ID=gene-PYH62_01695;Name=PYH62_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01695 CP118825.1 Protein Homology CDS 348041 349465 . + 0 ID=cds-WHI79577.1;Parent=gene-PYH62_01695;Dbxref=NCBI_GP:WHI79577.1;Name=WHI79577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020366330.1;locus_tag=PYH62_01695;product=polyphosphate--AMP phosphotransferase;protein_id=WHI79577.1;transl_table=11 CP118825.1 Genbank gene 349891 350616 . + . ID=gene-PYH62_01700;Name=PYH62_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01700 CP118825.1 Protein Homology CDS 349891 350616 . + 0 ID=cds-WHI79578.1;Parent=gene-PYH62_01700;Dbxref=NCBI_GP:WHI79578.1;Name=WHI79578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274811.1;locus_tag=PYH62_01700;product=transglycosylase;protein_id=WHI79578.1;transl_table=11 CP118825.1 cmsearch riboswitch 351239 351353 . + . ID=id-CP118825.1:351239..351353;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch CP118825.1 Genbank gene 351422 352591 . + . ID=gene-PYH62_01705;Name=PYH62_01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01705 CP118825.1 Protein Homology CDS 351422 352591 . + 0 ID=cds-WHI79579.1;Parent=gene-PYH62_01705;Dbxref=NCBI_GP:WHI79579.1;Name=WHI79579.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454816.1;locus_tag=PYH62_01705;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WHI79579.1;transl_table=11 CP118825.1 Genbank gene 352619 353617 . + . ID=gene-PYH62_01710;Name=PYH62_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01710 CP118825.1 Protein Homology CDS 352619 353617 . + 0 ID=cds-WHI79580.1;Parent=gene-PYH62_01710;Dbxref=NCBI_GP:WHI79580.1;Name=WHI79580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000161452.1;locus_tag=PYH62_01710;product=D-lactate dehydrogenase;protein_id=WHI79580.1;transl_table=11 CP118825.1 Genbank gene 353655 353864 . - . ID=gene-PYH62_01715;Name=copZ;gbkey=Gene;gene=copZ;gene_biotype=protein_coding;locus_tag=PYH62_01715 CP118825.1 Protein Homology CDS 353655 353864 . - 0 ID=cds-WHI79581.1;Parent=gene-PYH62_01715;Dbxref=NCBI_GP:WHI79581.1;Name=WHI79581.1;Ontology_term=GO:0005507;gbkey=CDS;gene=copZ;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175088.1;locus_tag=PYH62_01715;product=copper chaperone CopZ;protein_id=WHI79581.1;transl_table=11 CP118825.1 Genbank gene 353953 356340 . - . ID=gene-PYH62_01720;Name=PYH62_01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01720 CP118825.1 Protein Homology CDS 353953 356340 . - 0 ID=cds-WHI79582.1;Parent=gene-PYH62_01720;Dbxref=NCBI_GP:WHI79582.1;Name=WHI79582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488285.1;locus_tag=PYH62_01720;product=heavy metal translocating P-type ATPase;protein_id=WHI79582.1;transl_table=11 CP118825.1 Genbank gene 356475 356681 . - . ID=gene-PYH62_01725;Name=PYH62_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01725 CP118825.1 Protein Homology CDS 356475 356681 . - 0 ID=cds-WHI79583.1;Parent=gene-PYH62_01725;Dbxref=NCBI_GP:WHI79583.1;Name=WHI79583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488185.1;locus_tag=PYH62_01725;product=hypothetical protein;protein_id=WHI79583.1;transl_table=11 CP118825.1 Genbank gene 356872 357741 . + . ID=gene-PYH62_01730;Name=PYH62_01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01730 CP118825.1 Protein Homology CDS 356872 357741 . + 0 ID=cds-WHI79584.1;Parent=gene-PYH62_01730;Dbxref=NCBI_GP:WHI79584.1;Name=WHI79584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465127.1;locus_tag=PYH62_01730;product=SDR family oxidoreductase;protein_id=WHI79584.1;transl_table=11 CP118825.1 Genbank gene 357836 358429 . + . ID=gene-PYH62_01735;Name=PYH62_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01735 CP118825.1 Protein Homology CDS 357836 358429 . + 0 ID=cds-WHI79585.1;Parent=gene-PYH62_01735;Dbxref=NCBI_GP:WHI79585.1;Name=WHI79585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175084.1;locus_tag=PYH62_01735;product=sugar O-acetyltransferase;protein_id=WHI79585.1;transl_table=11 CP118825.1 Genbank pseudogene 358656 361165 . + . ID=gene-PYH62_01740;Name=PYH62_01740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_01740;pseudo=true CP118825.1 Protein Homology CDS 358656 361165 . + 0 ID=cds-PYH62_01740;Parent=gene-PYH62_01740;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454821.1;locus_tag=PYH62_01740;product=glycosyltransferase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 361209 362159 . - . ID=gene-PYH62_01745;Name=PYH62_01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01745 CP118825.1 Protein Homology CDS 361209 362159 . - 0 ID=cds-WHI79586.1;Parent=gene-PYH62_01745;Dbxref=NCBI_GP:WHI79586.1;Name=WHI79586.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454822.1;locus_tag=PYH62_01745;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WHI79586.1;transl_table=11 CP118825.1 Genbank gene 362430 363974 . + . ID=gene-PYH62_01750;Name=pruA;gbkey=Gene;gene=pruA;gene_biotype=protein_coding;locus_tag=PYH62_01750 CP118825.1 Protein Homology CDS 362430 363974 . + 0 ID=cds-WHI79587.1;Parent=gene-PYH62_01750;Dbxref=NCBI_GP:WHI79587.1;Name=WHI79587.1;Ontology_term=GO:0006562,GO:0003842;gbkey=CDS;gene=pruA;go_function=1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA;go_process=proline catabolic process|0006562||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274825.1;locus_tag=PYH62_01750;product=L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WHI79587.1;transl_table=11 CP118825.1 Genbank gene 364193 364420 . + . ID=gene-PYH62_01755;Name=PYH62_01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01755 CP118825.1 Protein Homology CDS 364193 364420 . + 0 ID=cds-WHI79588.1;Parent=gene-PYH62_01755;Dbxref=NCBI_GP:WHI79588.1;Name=WHI79588.1;Ontology_term=GO:0046914;gbkey=CDS;go_function=transition metal ion binding|0046914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447077.1;locus_tag=PYH62_01755;product=FeoA domain-containing protein;protein_id=WHI79588.1;transl_table=11 CP118825.1 Genbank gene 364425 366419 . + . ID=gene-PYH62_01760;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=PYH62_01760 CP118825.1 Protein Homology CDS 364425 366419 . + 0 ID=cds-WHI79589.1;Parent=gene-PYH62_01760;Dbxref=NCBI_GP:WHI79589.1;Name=WHI79589.1;Ontology_term=GO:0006826,GO:0015093;gbkey=CDS;gene=feoB;go_function=ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467714.1;locus_tag=PYH62_01760;product=ferrous iron transport protein B;protein_id=WHI79589.1;transl_table=11 CP118825.1 Genbank gene 366431 366619 . + . ID=gene-PYH62_01765;Name=PYH62_01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01765 CP118825.1 Protein Homology CDS 366431 366619 . + 0 ID=cds-WHI79590.1;Parent=gene-PYH62_01765;Dbxref=NCBI_GP:WHI79590.1;Name=WHI79590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449289.1;locus_tag=PYH62_01765;product=FeoB-associated Cys-rich membrane protein;protein_id=WHI79590.1;transl_table=11 CP118825.1 Genbank gene 366691 367239 . - . ID=gene-PYH62_01770;Name=PYH62_01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01770 CP118825.1 Protein Homology CDS 366691 367239 . - 0 ID=cds-WHI79591.1;Parent=gene-PYH62_01770;Dbxref=NCBI_GP:WHI79591.1;Name=WHI79591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175078.1;locus_tag=PYH62_01770;product=TetR/AcrR family transcriptional regulator;protein_id=WHI79591.1;transl_table=11 CP118825.1 Genbank gene 367566 368030 . + . ID=gene-PYH62_01775;Name=PYH62_01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01775 CP118825.1 Protein Homology CDS 367566 368030 . + 0 ID=cds-WHI79592.1;Parent=gene-PYH62_01775;Dbxref=NCBI_GP:WHI79592.1;Name=WHI79592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449534.1;locus_tag=PYH62_01775;product=hypothetical protein;protein_id=WHI79592.1;transl_table=11 CP118825.1 Genbank gene 368182 368703 . + . ID=gene-PYH62_01780;Name=PYH62_01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01780 CP118825.1 Protein Homology CDS 368182 368703 . + 0 ID=cds-WHI79593.1;Parent=gene-PYH62_01780;Dbxref=NCBI_GP:WHI79593.1;Name=WHI79593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000455992.1;locus_tag=PYH62_01780;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WHI79593.1;transl_table=11 CP118825.1 Genbank gene 368824 369990 . - . ID=gene-PYH62_01785;Name=PYH62_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01785 CP118825.1 Protein Homology CDS 368824 369990 . - 0 ID=cds-WHI79594.1;Parent=gene-PYH62_01785;Dbxref=NCBI_GP:WHI79594.1;Name=WHI79594.1;Ontology_term=GO:0004421;gbkey=CDS;go_function=hydroxymethylglutaryl-CoA synthase activity|0004421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501316.1;locus_tag=PYH62_01785;product=hydroxymethylglutaryl-CoA synthase;protein_id=WHI79594.1;transl_table=11 CP118825.1 Genbank pseudogene 370103 371258 . + . ID=gene-PYH62_01790;Name=PYH62_01790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_01790;pseudo=true CP118825.1 Protein Homology CDS 370103 371258 . + 0 ID=cds-PYH62_01790;Parent=gene-PYH62_01790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835142.1;locus_tag=PYH62_01790;product=thiolase family protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 371260 372537 . + . ID=gene-PYH62_01795;Name=PYH62_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01795 CP118825.1 Protein Homology CDS 371260 372537 . + 0 ID=cds-WHI79595.1;Parent=gene-PYH62_01795;Dbxref=NCBI_GP:WHI79595.1;Name=WHI79595.1;Ontology_term=GO:0016054,GO:0004420;gbkey=CDS;go_function=hydroxymethylglutaryl-CoA reductase (NADPH) activity|0004420||IEA;go_process=organic acid catabolic process|0016054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454829.1;locus_tag=PYH62_01795;product=hydroxymethylglutaryl-CoA reductase%2C degradative;protein_id=WHI79595.1;transl_table=11 CP118825.1 Genbank gene 372611 373045 . - . ID=gene-PYH62_01800;Name=PYH62_01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01800 CP118825.1 Protein Homology CDS 372611 373045 . - 0 ID=cds-WHI79596.1;Parent=gene-PYH62_01800;Dbxref=NCBI_GP:WHI79596.1;Name=WHI79596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500623.1;locus_tag=PYH62_01800;product=CHAP domain-containing protein;protein_id=WHI79596.1;transl_table=11 CP118825.1 Genbank gene 373263 373478 . - . ID=gene-PYH62_01805;Name=PYH62_01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01805 CP118825.1 Protein Homology CDS 373263 373478 . - 0 ID=cds-WHI79597.1;Parent=gene-PYH62_01805;Dbxref=NCBI_GP:WHI79597.1;Name=WHI79597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447085.1;locus_tag=PYH62_01805;product=sterile alpha motif-like domain-containing protein;protein_id=WHI79597.1;transl_table=11 CP118825.1 Genbank gene 373703 374587 . + . ID=gene-PYH62_01810;Name=PYH62_01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01810 CP118825.1 Protein Homology CDS 373703 374587 . + 0 ID=cds-WHI79598.1;Parent=gene-PYH62_01810;Dbxref=NCBI_GP:WHI79598.1;Name=WHI79598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477002.1;locus_tag=PYH62_01810;product=LysR family transcriptional regulator;protein_id=WHI79598.1;transl_table=11 CP118825.1 Genbank gene 374789 375178 . + . ID=gene-PYH62_01815;Name=PYH62_01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01815 CP118825.1 Protein Homology CDS 374789 375178 . + 0 ID=cds-WHI79599.1;Parent=gene-PYH62_01815;Dbxref=NCBI_GP:WHI79599.1;Name=WHI79599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449529.1;locus_tag=PYH62_01815;product=CidA/LrgA family protein;protein_id=WHI79599.1;transl_table=11 CP118825.1 Genbank gene 375181 375867 . + . ID=gene-PYH62_01820;Name=PYH62_01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01820 CP118825.1 Protein Homology CDS 375181 375867 . + 0 ID=cds-WHI79600.1;Parent=gene-PYH62_01820;Dbxref=NCBI_GP:WHI79600.1;Name=WHI79600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488250.1;locus_tag=PYH62_01820;product=LrgB family protein;protein_id=WHI79600.1;transl_table=11 CP118825.1 Genbank gene 375917 377656 . + . ID=gene-PYH62_01825;Name=PYH62_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01825 CP118825.1 Protein Homology CDS 375917 377656 . + 0 ID=cds-WHI79601.1;Parent=gene-PYH62_01825;Dbxref=NCBI_GP:WHI79601.1;Name=WHI79601.1;Ontology_term=GO:0000287,GO:0030976;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501306.1;locus_tag=PYH62_01825;product=pyruvate oxidase;protein_id=WHI79601.1;transl_table=11 CP118825.1 Genbank gene 377971 379998 . + . ID=gene-PYH62_01830;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=PYH62_01830 CP118825.1 Protein Homology CDS 377971 379998 . + 0 ID=cds-WHI79602.1;Parent=gene-PYH62_01830;Dbxref=NCBI_GP:WHI79602.1;Name=WHI79602.1;Ontology_term=GO:0005355;gbkey=CDS;gene=ptsG;go_function=glucose transmembrane transporter activity|0005355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832339.1;locus_tag=PYH62_01830;product=glucose-specific PTS transporter subunit IIBC;protein_id=WHI79602.1;transl_table=11 CP118825.1 Genbank gene 380173 381225 . - . ID=gene-PYH62_01835;Name=PYH62_01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01835 CP118825.1 Protein Homology CDS 380173 381225 . - 0 ID=cds-WHI79603.1;Parent=gene-PYH62_01835;Dbxref=NCBI_GP:WHI79603.1;Name=WHI79603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454834.1;locus_tag=PYH62_01835;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WHI79603.1;transl_table=11 CP118825.1 Genbank gene 381432 381758 . + . ID=gene-PYH62_01840;Name=PYH62_01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01840 CP118825.1 Protein Homology CDS 381432 381758 . + 0 ID=cds-WHI79604.1;Parent=gene-PYH62_01840;Dbxref=NCBI_GP:WHI79604.1;Name=WHI79604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454020.1;locus_tag=PYH62_01840;product=thioredoxin family protein;protein_id=WHI79604.1;transl_table=11 CP118825.1 Genbank gene 381813 382775 . - . ID=gene-PYH62_01845;Name=PYH62_01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01845 CP118825.1 Protein Homology CDS 381813 382775 . - 0 ID=cds-WHI79605.1;Parent=gene-PYH62_01845;Dbxref=NCBI_GP:WHI79605.1;Name=WHI79605.1;Ontology_term=GO:0006096,GO:0004459,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=L-lactate dehydrogenase activity|0004459||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449279.1;locus_tag=PYH62_01845;product=L-lactate dehydrogenase;protein_id=WHI79605.1;transl_table=11 CP118825.1 Genbank pseudogene 382937 383915 . + . ID=gene-PYH62_01850;Name=PYH62_01850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_01850;pseudo=true CP118825.1 Protein Homology CDS 382937 383915 . + 0 ID=cds-PYH62_01850;Parent=gene-PYH62_01850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454837.1;locus_tag=PYH62_01850;product=alpha/beta hydrolase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 384197 384502 . - . ID=gene-PYH62_01855;Name=PYH62_01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01855 CP118825.1 Protein Homology CDS 384197 384502 . - 0 ID=cds-WHI80223.1;Parent=gene-PYH62_01855;Dbxref=NCBI_GP:WHI80223.1;Name=WHI80223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488227.1;locus_tag=PYH62_01855;product=hypothetical protein;protein_id=WHI80223.1;transl_table=11 CP118825.1 Genbank gene 384853 386010 . + . ID=gene-PYH62_01860;Name=pgsB;gbkey=Gene;gene=pgsB;gene_biotype=protein_coding;locus_tag=PYH62_01860 CP118825.1 Protein Homology CDS 384853 386010 . + 0 ID=cds-WHI79606.1;Parent=gene-PYH62_01860;Dbxref=NCBI_GP:WHI79606.1;Name=WHI79606.1;Ontology_term=GO:0070501,GO:0016881;gbkey=CDS;gene=pgsB;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=poly-gamma-glutamate biosynthetic process|0070501||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501535.1;locus_tag=PYH62_01860;product=poly-gamma-glutamate synthase PgsB;protein_id=WHI79606.1;transl_table=11 CP118825.1 Genbank gene 386012 386464 . + . ID=gene-PYH62_01865;Name=pgsC;gbkey=Gene;gene=pgsC;gene_biotype=protein_coding;locus_tag=PYH62_01865 CP118825.1 Protein Homology CDS 386012 386464 . + 0 ID=cds-WHI79607.1;Parent=gene-PYH62_01865;Dbxref=NCBI_GP:WHI79607.1;Name=WHI79607.1;Ontology_term=GO:0070501,GO:0016881;gbkey=CDS;gene=pgsC;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=poly-gamma-glutamate biosynthetic process|0070501||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175061.1;locus_tag=PYH62_01865;product=poly-gamma-glutamate biosynthesis protein PgsC;protein_id=WHI79607.1;transl_table=11 CP118825.1 Genbank gene 386488 387558 . + . ID=gene-PYH62_01870;Name=PYH62_01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01870 CP118825.1 Protein Homology CDS 386488 387558 . + 0 ID=cds-WHI79608.1;Parent=gene-PYH62_01870;Dbxref=NCBI_GP:WHI79608.1;Name=WHI79608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438121.1;locus_tag=PYH62_01870;product=CapA family protein;protein_id=WHI79608.1;transl_table=11 CP118825.1 Genbank gene 387548 387709 . + . ID=gene-PYH62_01875;Name=PYH62_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01875 CP118825.1 Protein Homology CDS 387548 387709 . + 0 ID=cds-WHI79609.1;Parent=gene-PYH62_01875;Dbxref=NCBI_GP:WHI79609.1;Name=WHI79609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449238.1;locus_tag=PYH62_01875;product=hypothetical protein;protein_id=WHI79609.1;transl_table=11 CP118825.1 Genbank gene 387711 389309 . + . ID=gene-PYH62_01880;Name=PYH62_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01880 CP118825.1 Protein Homology CDS 387711 389309 . + 0 ID=cds-WHI79610.1;Parent=gene-PYH62_01880;Dbxref=NCBI_GP:WHI79610.1;Name=WHI79610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438123.1;locus_tag=PYH62_01880;product=gamma-glutamyltransferase;protein_id=WHI79610.1;transl_table=11 CP118825.1 Genbank gene 389500 390981 . + . ID=gene-PYH62_01885;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=PYH62_01885 CP118825.1 Protein Homology CDS 389500 390981 . + 0 ID=cds-WHI79611.1;Parent=gene-PYH62_01885;Dbxref=NCBI_GP:WHI79611.1;Name=WHI79611.1;Ontology_term=GO:0005997,GO:0042732,GO:0004856,GO:0005515;gbkey=CDS;gene=xylB;go_function=xylulokinase activity|0004856||IEA,protein binding|0005515||IEA;go_process=xylulose metabolic process|0005997||IEA,D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449317.1;locus_tag=PYH62_01885;product=xylulokinase;protein_id=WHI79611.1;transl_table=11 CP118825.1 Genbank gene 391907 392950 . + . ID=gene-PYH62_01890;Name=PYH62_01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01890 CP118825.1 Protein Homology CDS 391907 392950 . + 0 ID=cds-WHI79612.1;Parent=gene-PYH62_01890;Dbxref=NCBI_GP:WHI79612.1;Name=WHI79612.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001551877.1;locus_tag=PYH62_01890;product=PTS sugar transporter subunit IIC;protein_id=WHI79612.1;transl_table=11 CP118825.1 Genbank gene 392953 393639 . + . ID=gene-PYH62_01895;Name=PYH62_01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01895 CP118825.1 Protein Homology CDS 392953 393639 . + 0 ID=cds-WHI79613.1;Parent=gene-PYH62_01895;Dbxref=NCBI_GP:WHI79613.1;Name=WHI79613.1;Ontology_term=GO:0006094,GO:0003941,GO:0051539;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488292.1;locus_tag=PYH62_01895;product=serine dehydratase beta chain;protein_id=WHI79613.1;transl_table=11 CP118825.1 Genbank pseudogene 393653 394556 . + . ID=gene-PYH62_01900;Name=sdaAA;gbkey=Gene;gene=sdaAA;gene_biotype=pseudogene;locus_tag=PYH62_01900;pseudo=true CP118825.1 Protein Homology CDS 393653 394556 . + 0 ID=cds-PYH62_01900;Parent=gene-PYH62_01900;Note=frameshifted;Ontology_term=GO:0006094,GO:0006565,GO:0003941;gbkey=CDS;gene=sdaAA;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA,L-serine catabolic process|0006565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449485.1;locus_tag=PYH62_01900;product=L-serine ammonia-lyase%2C iron-sulfur-dependent%2C subunit alpha;pseudo=true;transl_table=11 CP118825.1 Genbank gene 394697 394900 . + . ID=gene-PYH62_01905;Name=PYH62_01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01905 CP118825.1 Protein Homology CDS 394697 394900 . + 0 ID=cds-WHI79614.1;Parent=gene-PYH62_01905;Dbxref=NCBI_GP:WHI79614.1;Name=WHI79614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447106.1;locus_tag=PYH62_01905;product=hypothetical protein;protein_id=WHI79614.1;transl_table=11 CP118825.1 Genbank pseudogene 394954 395452 . - . ID=gene-PYH62_01910;Name=PYH62_01910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_01910;pseudo=true CP118825.1 Protein Homology CDS 394954 395452 . - 0 ID=cds-PYH62_01910;Parent=gene-PYH62_01910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835128.1;locus_tag=PYH62_01910;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 395601 396206 . + . ID=gene-PYH62_01915;Name=srtA;gbkey=Gene;gene=srtA;gene_biotype=protein_coding;locus_tag=PYH62_01915 CP118825.1 Protein Homology CDS 395601 396206 . + 0 ID=cds-WHI79615.1;Parent=gene-PYH62_01915;Dbxref=NCBI_GP:WHI79615.1;Name=WHI79615.1;gbkey=CDS;gene=srtA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501293.1;locus_tag=PYH62_01915;product=class A sortase SrtA;protein_id=WHI79615.1;transl_table=11 CP118825.1 Genbank gene 396384 397193 . + . ID=gene-PYH62_01920;Name=PYH62_01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01920 CP118825.1 Protein Homology CDS 396384 397193 . + 0 ID=cds-WHI79616.1;Parent=gene-PYH62_01920;Dbxref=NCBI_GP:WHI79616.1;Name=WHI79616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449371.1;locus_tag=PYH62_01920;product=Cof-type HAD-IIB family hydrolase;protein_id=WHI79616.1;transl_table=11 CP118825.1 Genbank gene 397283 398275 . - . ID=gene-PYH62_01925;Name=PYH62_01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01925 CP118825.1 Protein Homology CDS 397283 398275 . - 0 ID=cds-WHI79617.1;Parent=gene-PYH62_01925;Dbxref=NCBI_GP:WHI79617.1;Name=WHI79617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456690.1;locus_tag=PYH62_01925;product=D-lactate dehydrogenase;protein_id=WHI79617.1;transl_table=11 CP118825.1 Genbank gene 398599 399261 . + . ID=gene-PYH62_01930;Name=PYH62_01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01930 CP118825.1 Protein Homology CDS 398599 399261 . + 0 ID=cds-WHI80224.1;Parent=gene-PYH62_01930;Dbxref=NCBI_GP:WHI80224.1;Name=WHI80224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494514.1;locus_tag=PYH62_01930;product=NAD(P)H-dependent oxidoreductase;protein_id=WHI80224.1;transl_table=11 CP118825.1 Genbank gene 399392 400885 . + . ID=gene-PYH62_01935;Name=PYH62_01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01935 CP118825.1 Protein Homology CDS 399392 400885 . + 0 ID=cds-WHI79618.1;Parent=gene-PYH62_01935;Dbxref=NCBI_GP:WHI79618.1;Name=WHI79618.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501529.1;locus_tag=PYH62_01935;product=aldehyde dehydrogenase family protein;protein_id=WHI79618.1;transl_table=11 CP118825.1 Genbank pseudogene 401217 402127 . + . ID=gene-PYH62_01940;Name=PYH62_01940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_01940;pseudo=true CP118825.1 Protein Homology CDS 401217 402127 . + 0 ID=cds-PYH62_01940;Parent=gene-PYH62_01940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454851.1;locus_tag=PYH62_01940;product=phosphate/phosphite/phosphonate ABC transporter substrate-binding protein;pseudo=true;transl_table=11 CP118825.1 Genbank pseudogene 402159 402965 . - . ID=gene-PYH62_01945;Name=PYH62_01945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_01945;pseudo=true CP118825.1 Protein Homology CDS 402159 402965 . - 0 ID=cds-PYH62_01945;Parent=gene-PYH62_01945;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448375.1;locus_tag=PYH62_01945;product=VOC family protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 403093 403374 . - . ID=gene-PYH62_01950;Name=PYH62_01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01950 CP118825.1 Protein Homology CDS 403093 403374 . - 0 ID=cds-WHI79619.1;Parent=gene-PYH62_01950;Dbxref=NCBI_GP:WHI79619.1;Name=WHI79619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360598.1;locus_tag=PYH62_01950;product=GNAT family N-acetyltransferase;protein_id=WHI79619.1;transl_table=11 CP118825.1 Genbank gene 403556 404512 . + . ID=gene-PYH62_01955;Name=PYH62_01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01955 CP118825.1 Protein Homology CDS 403556 404512 . + 0 ID=cds-WHI79620.1;Parent=gene-PYH62_01955;Dbxref=NCBI_GP:WHI79620.1;Name=WHI79620.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834965.1;locus_tag=PYH62_01955;product=zinc ABC transporter substrate-binding protein;protein_id=WHI79620.1;transl_table=11 CP118825.1 Genbank gene 404572 405996 . - . ID=gene-PYH62_01960;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=PYH62_01960 CP118825.1 Protein Homology CDS 404572 405996 . - 0 ID=cds-WHI79621.1;Parent=gene-PYH62_01960;Dbxref=NCBI_GP:WHI79621.1;Name=WHI79621.1;Ontology_term=GO:0016620;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002484955.1;locus_tag=PYH62_01960;product=aldehyde dehydrogenase;protein_id=WHI79621.1;transl_table=11 CP118825.1 Genbank gene 406072 407157 . - . ID=gene-PYH62_01965;Name=PYH62_01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01965 CP118825.1 Protein Homology CDS 406072 407157 . - 0 ID=cds-WHI79622.1;Parent=gene-PYH62_01965;Dbxref=NCBI_GP:WHI79622.1;Name=WHI79622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454855.1;locus_tag=PYH62_01965;product=hypothetical protein;protein_id=WHI79622.1;transl_table=11 CP118825.1 Genbank gene 407439 409223 . + . ID=gene-PYH62_01970;Name=PYH62_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01970 CP118825.1 Protein Homology CDS 407439 409223 . + 0 ID=cds-WHI79623.1;Parent=gene-PYH62_01970;Dbxref=NCBI_GP:WHI79623.1;Name=WHI79623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448595.1;locus_tag=PYH62_01970;product=sodium:proton antiporter;protein_id=WHI79623.1;transl_table=11 CP118825.1 Genbank gene 409277 411241 . - . ID=gene-PYH62_01975;Name=PYH62_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01975 CP118825.1 Protein Homology CDS 409277 411241 . - 0 ID=cds-WHI79624.1;Parent=gene-PYH62_01975;Dbxref=NCBI_GP:WHI79624.1;Name=WHI79624.1;Ontology_term=GO:0006094,GO:0042132;gbkey=CDS;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499540.1;locus_tag=PYH62_01975;product=fructose-bisphosphatase class III;protein_id=WHI79624.1;transl_table=11 CP118825.1 Genbank gene 411387 411998 . - . ID=gene-PYH62_01980;Name=PYH62_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01980 CP118825.1 Protein Homology CDS 411387 411998 . - 0 ID=cds-WHI79625.1;Parent=gene-PYH62_01980;Dbxref=NCBI_GP:WHI79625.1;Name=WHI79625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463347.1;locus_tag=PYH62_01980;product=DedA family protein;protein_id=WHI79625.1;transl_table=11 CP118825.1 Genbank gene 412116 413114 . - . ID=gene-PYH62_01985;Name=PYH62_01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_01985 CP118825.1 Protein Homology CDS 412116 413114 . - 0 ID=cds-WHI79626.1;Parent=gene-PYH62_01985;Dbxref=NCBI_GP:WHI79626.1;Name=WHI79626.1;Ontology_term=GO:0008641;gbkey=CDS;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502579.1;locus_tag=PYH62_01985;product=ThiF family adenylyltransferase;protein_id=WHI79626.1;transl_table=11 CP118825.1 Genbank pseudogene 413114 413883 . - . ID=gene-PYH62_01990;Name=PYH62_01990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_01990;pseudo=true CP118825.1 Protein Homology CDS 413114 413883 . - 0 ID=cds-PYH62_01990;Parent=gene-PYH62_01990;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015901320.1;locus_tag=PYH62_01990;product=thiazole synthase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 413885 414085 . - . ID=gene-PYH62_01995;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=PYH62_01995 CP118825.1 Protein Homology CDS 413885 414085 . - 0 ID=cds-WHI79627.1;Parent=gene-PYH62_01995;Dbxref=NCBI_GP:WHI79627.1;Name=WHI79627.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464520.1;locus_tag=PYH62_01995;product=sulfur carrier protein ThiS;protein_id=WHI79627.1;transl_table=11 CP118825.1 Genbank gene 414069 415184 . - . ID=gene-PYH62_02000;Name=thiO;gbkey=Gene;gene=thiO;gene_biotype=protein_coding;locus_tag=PYH62_02000 CP118825.1 Protein Homology CDS 414069 415184 . - 0 ID=cds-WHI79628.1;Parent=gene-PYH62_02000;Dbxref=NCBI_GP:WHI79628.1;Name=WHI79628.1;Ontology_term=GO:0016647;gbkey=CDS;gene=thiO;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors%2C oxygen as acceptor|0016647||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502578.1;locus_tag=PYH62_02000;product=glycine oxidase ThiO;protein_id=WHI79628.1;transl_table=11 CP118825.1 Genbank gene 415177 415767 . - . ID=gene-PYH62_02005;Name=PYH62_02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02005 CP118825.1 Protein Homology CDS 415177 415767 . - 0 ID=cds-WHI79629.1;Parent=gene-PYH62_02005;Dbxref=NCBI_GP:WHI79629.1;Name=WHI79629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448571.1;locus_tag=PYH62_02005;product=thiamine phosphate synthase;protein_id=WHI79629.1;transl_table=11 CP118825.1 cmsearch riboswitch 415835 415944 . - . ID=id-CP118825.1:415835..415944;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch CP118825.1 Genbank pseudogene 416292 417572 . + . ID=gene-PYH62_02010;Name=PYH62_02010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_02010;pseudo=true CP118825.1 Protein Homology CDS 416292 417572 . + 0 ID=cds-PYH62_02010;Parent=gene-PYH62_02010;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175033.1;locus_tag=PYH62_02010;product=MFS transporter;pseudo=true;transl_table=11 CP118825.1 Genbank gene 417750 418034 . + . ID=gene-PYH62_02015;Name=PYH62_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02015 CP118825.1 Protein Homology CDS 417750 418034 . + 0 ID=cds-WHI79630.1;Parent=gene-PYH62_02015;Dbxref=NCBI_GP:WHI79630.1;Name=WHI79630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834975.1;locus_tag=PYH62_02015;product=putative quinol monooxygenase;protein_id=WHI79630.1;transl_table=11 CP118825.1 Genbank gene 418130 420067 . + . ID=gene-PYH62_02020;Name=PYH62_02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02020 CP118825.1 Protein Homology CDS 418130 420067 . + 0 ID=cds-WHI80225.1;Parent=gene-PYH62_02020;Dbxref=NCBI_GP:WHI80225.1;Name=WHI80225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454863.1;locus_tag=PYH62_02020;product=FUSC family protein;protein_id=WHI80225.1;transl_table=11 CP118825.1 Genbank gene 420140 420553 . + . ID=gene-PYH62_02025;Name=PYH62_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02025 CP118825.1 Protein Homology CDS 420140 420553 . + 0 ID=cds-WHI79631.1;Parent=gene-PYH62_02025;Dbxref=NCBI_GP:WHI79631.1;Name=WHI79631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447130.1;locus_tag=PYH62_02025;product=DUF2188 domain-containing protein;protein_id=WHI79631.1;transl_table=11 CP118825.1 Genbank gene 420709 421410 . + . ID=gene-PYH62_02030;Name=PYH62_02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02030 CP118825.1 Protein Homology CDS 420709 421410 . + 0 ID=cds-WHI79632.1;Parent=gene-PYH62_02030;Dbxref=NCBI_GP:WHI79632.1;Name=WHI79632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454864.1;locus_tag=PYH62_02030;product=GTP pyrophosphokinase family protein;protein_id=WHI79632.1;transl_table=11 CP118825.1 Genbank gene 421535 422410 . + . ID=gene-PYH62_02035;Name=PYH62_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02035 CP118825.1 Protein Homology CDS 421535 422410 . + 0 ID=cds-WHI79633.1;Parent=gene-PYH62_02035;Dbxref=NCBI_GP:WHI79633.1;Name=WHI79633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495957.1;locus_tag=PYH62_02035;product=alpha/beta hydrolase;protein_id=WHI79633.1;transl_table=11 CP118825.1 Genbank gene 422502 423224 . + . ID=gene-PYH62_02040;Name=PYH62_02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02040 CP118825.1 Protein Homology CDS 422502 423224 . + 0 ID=cds-WHI79634.1;Parent=gene-PYH62_02040;Dbxref=NCBI_GP:WHI79634.1;Name=WHI79634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488749.1;locus_tag=PYH62_02040;product=MerR family transcriptional regulator;protein_id=WHI79634.1;transl_table=11 CP118825.1 Genbank gene 423341 424021 . + . ID=gene-PYH62_02045;Name=PYH62_02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02045 CP118825.1 Protein Homology CDS 423341 424021 . + 0 ID=cds-WHI79635.1;Parent=gene-PYH62_02045;Dbxref=NCBI_GP:WHI79635.1;Name=WHI79635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488719.1;locus_tag=PYH62_02045;product=GntR family transcriptional regulator;protein_id=WHI79635.1;transl_table=11 CP118825.1 Genbank gene 424044 425582 . + . ID=gene-PYH62_02050;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=PYH62_02050 CP118825.1 Protein Homology CDS 424044 425582 . + 0 ID=cds-WHI79636.1;Parent=gene-PYH62_02050;Dbxref=NCBI_GP:WHI79636.1;Name=WHI79636.1;Ontology_term=GO:0009255,GO:0019200;gbkey=CDS;gene=gntK;go_function=carbohydrate kinase activity|0019200||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002478643.1;locus_tag=PYH62_02050;product=gluconokinase;protein_id=WHI79636.1;transl_table=11 CP118825.1 Genbank gene 425626 426981 . + . ID=gene-PYH62_02055;Name=PYH62_02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02055 CP118825.1 Protein Homology CDS 425626 426981 . + 0 ID=cds-WHI79637.1;Parent=gene-PYH62_02055;Dbxref=NCBI_GP:WHI79637.1;Name=WHI79637.1;Ontology_term=GO:0015718,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=solute:proton symporter activity|0015295||IEA;go_process=monocarboxylic acid transport|0015718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834983.1;locus_tag=PYH62_02055;product=gluconate:H+ symporter;protein_id=WHI79637.1;transl_table=11 CP118825.1 Genbank gene 427139 428005 . + . ID=gene-PYH62_02060;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=PYH62_02060 CP118825.1 Protein Homology CDS 427139 428005 . + 0 ID=cds-WHI79638.1;Parent=gene-PYH62_02060;Dbxref=NCBI_GP:WHI79638.1;Name=WHI79638.1;Ontology_term=GO:0009225,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000721336.1;locus_tag=PYH62_02060;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WHI79638.1;transl_table=11 CP118825.1 Genbank gene 428536 429780 . + . ID=gene-PYH62_02065;Name=PYH62_02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02065 CP118825.1 Protein Homology CDS 428536 429780 . + 0 ID=cds-WHI79639.1;Parent=gene-PYH62_02065;Dbxref=NCBI_GP:WHI79639.1;Name=WHI79639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729107.1;locus_tag=PYH62_02065;product=DNA cytosine methyltransferase;protein_id=WHI79639.1;transl_table=11 CP118825.1 Genbank gene 429867 430637 . - . ID=gene-PYH62_02070;Name=PYH62_02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02070 CP118825.1 GeneMarkS-2+ CDS 429867 430637 . - 0 ID=cds-WHI79640.1;Parent=gene-PYH62_02070;Dbxref=NCBI_GP:WHI79640.1;Name=WHI79640.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_02070;product=hypothetical protein;protein_id=WHI79640.1;transl_table=11 CP118825.1 Genbank gene 431032 431223 . + . ID=gene-PYH62_02075;Name=PYH62_02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02075 CP118825.1 Protein Homology CDS 431032 431223 . + 0 ID=cds-WHI79641.1;Parent=gene-PYH62_02075;Dbxref=NCBI_GP:WHI79641.1;Name=WHI79641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001224378.1;locus_tag=PYH62_02075;product=hypothetical protein;protein_id=WHI79641.1;transl_table=11 CP118825.1 Genbank gene 431379 431663 . - . ID=gene-PYH62_02080;Name=PYH62_02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02080 CP118825.1 Protein Homology CDS 431379 431663 . - 0 ID=cds-WHI79642.1;Parent=gene-PYH62_02080;Dbxref=NCBI_GP:WHI79642.1;Name=WHI79642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448404.1;locus_tag=PYH62_02080;product=DUF1413 domain-containing protein;protein_id=WHI79642.1;transl_table=11 CP118825.1 Genbank gene 431819 432514 . + . ID=gene-PYH62_02085;Name=PYH62_02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02085 CP118825.1 Protein Homology CDS 431819 432514 . + 0 ID=cds-WHI79643.1;Parent=gene-PYH62_02085;Dbxref=NCBI_GP:WHI79643.1;Name=WHI79643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000217473.1;locus_tag=PYH62_02085;product=SDR family oxidoreductase;protein_id=WHI79643.1;transl_table=11 CP118825.1 Genbank gene 432639 433871 . + . ID=gene-PYH62_02090;Name=PYH62_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02090 CP118825.1 Protein Homology CDS 432639 433871 . + 0 ID=cds-WHI79644.1;Parent=gene-PYH62_02090;Dbxref=NCBI_GP:WHI79644.1;Name=WHI79644.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454873.1;locus_tag=PYH62_02090;product=acetylornithine deacetylase;protein_id=WHI79644.1;transl_table=11 CP118825.1 Genbank gene 433928 436093 . - . ID=gene-PYH62_02095;Name=PYH62_02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02095 CP118825.1 Protein Homology CDS 433928 436093 . - 0 ID=cds-WHI79645.1;Parent=gene-PYH62_02095;Dbxref=NCBI_GP:WHI79645.1;Name=WHI79645.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274912.1;locus_tag=PYH62_02095;product=RNA degradosome polyphosphate kinase;protein_id=WHI79645.1;transl_table=11 CP118825.1 Genbank gene 436196 437737 . - . ID=gene-PYH62_02100;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=PYH62_02100 CP118825.1 Protein Homology CDS 436196 437737 . - 0 ID=cds-WHI79646.1;Parent=gene-PYH62_02100;Dbxref=NCBI_GP:WHI79646.1;Name=WHI79646.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361298.1;locus_tag=PYH62_02100;product=exopolyphosphatase;protein_id=WHI79646.1;transl_table=11 CP118825.1 Genbank gene 437953 438771 . + . ID=gene-PYH62_02105;Name=PYH62_02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02105 CP118825.1 Protein Homology CDS 437953 438771 . + 0 ID=cds-WHI79647.1;Parent=gene-PYH62_02105;Dbxref=NCBI_GP:WHI79647.1;Name=WHI79647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503368.1;locus_tag=PYH62_02105;product=SDR family oxidoreductase;protein_id=WHI79647.1;transl_table=11 CP118825.1 Genbank gene 439159 440235 . - . ID=gene-PYH62_02110;Name=PYH62_02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02110 CP118825.1 Protein Homology CDS 439159 440235 . - 0 ID=cds-WHI79648.1;Parent=gene-PYH62_02110;Dbxref=NCBI_GP:WHI79648.1;Name=WHI79648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001072887.1;locus_tag=PYH62_02110;product=M42 family metallopeptidase;protein_id=WHI79648.1;transl_table=11 CP118825.1 Genbank gene 440400 440858 . + . ID=gene-PYH62_02115;Name=PYH62_02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02115 CP118825.1 Protein Homology CDS 440400 440858 . + 0 ID=cds-WHI79649.1;Parent=gene-PYH62_02115;Dbxref=NCBI_GP:WHI79649.1;Name=WHI79649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002444202.1;locus_tag=PYH62_02115;product=DUF1307 domain-containing protein;protein_id=WHI79649.1;transl_table=11 CP118825.1 Genbank gene 440912 442492 . - . ID=gene-PYH62_02120;Name=PYH62_02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02120 CP118825.1 Protein Homology CDS 440912 442492 . - 0 ID=cds-WHI79650.1;Parent=gene-PYH62_02120;Dbxref=NCBI_GP:WHI79650.1;Name=WHI79650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175006.1;locus_tag=PYH62_02120;product=FMN-binding glutamate synthase family protein;protein_id=WHI79650.1;transl_table=11 CP118825.1 Genbank gene 442677 443459 . + . ID=gene-PYH62_02125;Name=PYH62_02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02125 CP118825.1 Protein Homology CDS 442677 443459 . + 0 ID=cds-WHI79651.1;Parent=gene-PYH62_02125;Dbxref=NCBI_GP:WHI79651.1;Name=WHI79651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488738.1;locus_tag=PYH62_02125;product=lysostaphin resistance A-like protein;protein_id=WHI79651.1;transl_table=11 CP118825.1 Genbank gene 443482 444291 . + . ID=gene-PYH62_02130;Name=PYH62_02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02130 CP118825.1 Protein Homology CDS 443482 444291 . + 0 ID=cds-WHI79652.1;Parent=gene-PYH62_02130;Dbxref=NCBI_GP:WHI79652.1;Name=WHI79652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835002.1;locus_tag=PYH62_02130;product=type II CAAX endopeptidase family protein;protein_id=WHI79652.1;transl_table=11 CP118825.1 Genbank pseudogene 444421 445084 . + . ID=gene-PYH62_02135;Name=PYH62_02135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_02135;pseudo=true CP118825.1 Protein Homology CDS 444421 445084 . + 0 ID=cds-PYH62_02135;Parent=gene-PYH62_02135;Note=frameshifted;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501499.1;locus_tag=PYH62_02135;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 445077 445853 . + . ID=gene-PYH62_02140;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=PYH62_02140 CP118825.1 Protein Homology CDS 445077 445853 . + 0 ID=cds-WHI79653.1;Parent=gene-PYH62_02140;Dbxref=NCBI_GP:WHI79653.1;Name=WHI79653.1;gbkey=CDS;gene=fetB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501212.1;locus_tag=PYH62_02140;product=iron export ABC transporter permease subunit FetB;protein_id=WHI79653.1;transl_table=11 CP118825.1 Genbank gene 445985 447160 . + . ID=gene-PYH62_02145;Name=PYH62_02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02145 CP118825.1 Protein Homology CDS 445985 447160 . + 0 ID=cds-WHI79654.1;Parent=gene-PYH62_02145;Dbxref=NCBI_GP:WHI79654.1;Name=WHI79654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002432594.1;locus_tag=PYH62_02145;product=MFS transporter;protein_id=WHI79654.1;transl_table=11 CP118825.1 Genbank gene 447209 448558 . - . ID=gene-PYH62_02150;Name=PYH62_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02150 CP118825.1 Protein Homology CDS 447209 448558 . - 0 ID=cds-WHI79655.1;Parent=gene-PYH62_02150;Dbxref=NCBI_GP:WHI79655.1;Name=WHI79655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454883.1;locus_tag=PYH62_02150;product=carboxylesterase family protein;protein_id=WHI79655.1;transl_table=11 CP118825.1 Genbank pseudogene 448660 450304 . - . ID=gene-PYH62_02155;Name=PYH62_02155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_02155;pseudo=true CP118825.1 Protein Homology CDS 448660 450304 . - 0 ID=cds-PYH62_02155;Parent=gene-PYH62_02155;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454884.1;locus_tag=PYH62_02155;product=APC family permease;pseudo=true;transl_table=11 CP118825.1 Genbank gene 450603 451658 . - . ID=gene-PYH62_02160;Name=PYH62_02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02160 CP118825.1 Protein Homology CDS 450603 451658 . - 0 ID=cds-WHI79656.1;Parent=gene-PYH62_02160;Dbxref=NCBI_GP:WHI79656.1;Name=WHI79656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448606.1;locus_tag=PYH62_02160;product=2%2C3-butanediol dehydrogenase;protein_id=WHI79656.1;transl_table=11 CP118825.1 Genbank gene 452106 453404 . + . ID=gene-PYH62_02165;Name=PYH62_02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02165 CP118825.1 Protein Homology CDS 452106 453404 . + 0 ID=cds-WHI79657.1;Parent=gene-PYH62_02165;Dbxref=NCBI_GP:WHI79657.1;Name=WHI79657.1;Note=Members of the family are the ATP-binding subunit of ABC transporters for substrates such as betaine%2C L-proline or other amino acids%2C choline%2C carnitine%2C etc. The substrate specificity is best determined from the substrate-binding subunit%2C rather than this subunit%2C as it interacts with the permease subunit and not with substrate directly.;Ontology_term=GO:0015837,GO:0005524,GO:0009898,GO:0043190;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834806.1;locus_tag=PYH62_02165;product=betaine/proline/choline family ABC transporter ATP-binding protein;protein_id=WHI79657.1;transl_table=11 CP118825.1 Genbank gene 453404 454039 . + . ID=gene-PYH62_02170;Name=PYH62_02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02170 CP118825.1 Protein Homology CDS 453404 454039 . + 0 ID=cds-WHI79658.1;Parent=gene-PYH62_02170;Dbxref=NCBI_GP:WHI79658.1;Name=WHI79658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637570.1;locus_tag=PYH62_02170;product=ABC transporter permease;protein_id=WHI79658.1;transl_table=11 CP118825.1 Genbank gene 454064 455002 . + . ID=gene-PYH62_02175;Name=PYH62_02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02175 CP118825.1 Protein Homology CDS 454064 455002 . + 0 ID=cds-WHI79659.1;Parent=gene-PYH62_02175;Dbxref=NCBI_GP:WHI79659.1;Name=WHI79659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454887.1;locus_tag=PYH62_02175;product=osmoprotectant ABC transporter substrate-binding protein;protein_id=WHI79659.1;transl_table=11 CP118825.1 Genbank gene 455005 455682 . + . ID=gene-PYH62_02180;Name=PYH62_02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02180 CP118825.1 Protein Homology CDS 455005 455682 . + 0 ID=cds-WHI79660.1;Parent=gene-PYH62_02180;Dbxref=NCBI_GP:WHI79660.1;Name=WHI79660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174994.1;locus_tag=PYH62_02180;product=ABC transporter permease;protein_id=WHI79660.1;transl_table=11 CP118825.1 Genbank gene 455746 456447 . - . ID=gene-PYH62_02185;Name=lrgB;gbkey=Gene;gene=lrgB;gene_biotype=protein_coding;locus_tag=PYH62_02185 CP118825.1 Protein Homology CDS 455746 456447 . - 0 ID=cds-WHI79661.1;Parent=gene-PYH62_02185;Dbxref=NCBI_GP:WHI79661.1;Name=WHI79661.1;gbkey=CDS;gene=lrgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492514.1;locus_tag=PYH62_02185;product=antiholin-like protein LrgB;protein_id=WHI79661.1;transl_table=11 CP118825.1 Genbank gene 456447 456902 . - . ID=gene-PYH62_02190;Name=lrgA;gbkey=Gene;gene=lrgA;gene_biotype=protein_coding;locus_tag=PYH62_02190 CP118825.1 Protein Homology CDS 456447 456902 . - 0 ID=cds-WHI79662.1;Parent=gene-PYH62_02190;Dbxref=NCBI_GP:WHI79662.1;Name=WHI79662.1;gbkey=CDS;gene=lrgA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834807.1;locus_tag=PYH62_02190;product=antiholin-like murein hydrolase modulator LrgA;protein_id=WHI79662.1;transl_table=11 CP118825.1 Genbank gene 457138 457908 . - . ID=gene-PYH62_02195;Name=PYH62_02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02195 CP118825.1 Protein Homology CDS 457138 457908 . - 0 ID=cds-WHI79663.1;Parent=gene-PYH62_02195;Dbxref=NCBI_GP:WHI79663.1;Name=WHI79663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274937.1;locus_tag=PYH62_02195;product=response regulator transcription factor LytR;protein_id=WHI79663.1;transl_table=11 CP118825.1 Genbank gene 457909 459663 . - . ID=gene-PYH62_02200;Name=PYH62_02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02200 CP118825.1 Protein Homology CDS 457909 459663 . - 0 ID=cds-WHI79664.1;Parent=gene-PYH62_02200;Dbxref=NCBI_GP:WHI79664.1;Name=WHI79664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174991.1;locus_tag=PYH62_02200;product=sensor histidine kinase;protein_id=WHI79664.1;transl_table=11 CP118825.1 Genbank gene 459928 461328 . + . ID=gene-PYH62_02205;Name=PYH62_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02205 CP118825.1 Protein Homology CDS 459928 461328 . + 0 ID=cds-WHI79665.1;Parent=gene-PYH62_02205;Dbxref=NCBI_GP:WHI79665.1;Name=WHI79665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448434.1;locus_tag=PYH62_02205;product=MFS transporter;protein_id=WHI79665.1;transl_table=11 CP118825.1 Genbank gene 461585 462517 . + . ID=gene-PYH62_02210;Name=PYH62_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02210 CP118825.1 Protein Homology CDS 461585 462517 . + 0 ID=cds-WHI79666.1;Parent=gene-PYH62_02210;Dbxref=NCBI_GP:WHI79666.1;Name=WHI79666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831565.1;locus_tag=PYH62_02210;product=2-dehydropantoate 2-reductase;protein_id=WHI79666.1;transl_table=11 CP118825.1 Genbank gene 462618 463091 . + . ID=gene-PYH62_02215;Name=PYH62_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02215 CP118825.1 Protein Homology CDS 462618 463091 . + 0 ID=cds-WHI79667.1;Parent=gene-PYH62_02215;Dbxref=NCBI_GP:WHI79667.1;Name=WHI79667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174988.1;locus_tag=PYH62_02215;product=DUF1440 domain-containing protein;protein_id=WHI79667.1;transl_table=11 CP118825.1 Genbank gene 463148 463990 . - . ID=gene-PYH62_02220;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=PYH62_02220 CP118825.1 Protein Homology CDS 463148 463990 . - 0 ID=cds-WHI79668.1;Parent=gene-PYH62_02220;Dbxref=NCBI_GP:WHI79668.1;Name=WHI79668.1;Ontology_term=GO:0051205,GO:0003674,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=molecular_function|0003674||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448436.1;locus_tag=PYH62_02220;product=membrane protein insertase YidC;protein_id=WHI79668.1;transl_table=11 CP118825.1 Genbank gene 464088 465581 . - . ID=gene-PYH62_02225;Name=PYH62_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02225 CP118825.1 Protein Homology CDS 464088 465581 . - 0 ID=cds-WHI79669.1;Parent=gene-PYH62_02225;Dbxref=NCBI_GP:WHI79669.1;Name=WHI79669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834813.1;locus_tag=PYH62_02225;product=serine hydrolase;protein_id=WHI79669.1;transl_table=11 CP118825.1 Genbank gene 465854 467680 . + . ID=gene-PYH62_02230;Name=PYH62_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02230 CP118825.1 Protein Homology CDS 465854 467680 . + 0 ID=cds-WHI79670.1;Parent=gene-PYH62_02230;Dbxref=NCBI_GP:WHI79670.1;Name=WHI79670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501195.1;locus_tag=PYH62_02230;product=APC family permease;protein_id=WHI79670.1;transl_table=11 CP118825.1 Genbank pseudogene 467734 469831 . - . ID=gene-PYH62_02235;Name=PYH62_02235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_02235;pseudo=true CP118825.1 Protein Homology CDS 467734 469831 . - 0 ID=cds-PYH62_02235;Parent=gene-PYH62_02235;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185676.1;locus_tag=PYH62_02235;product=sodium:proton antiporter;pseudo=true;transl_table=11 CP118825.1 Genbank gene 469965 471365 . - . ID=gene-PYH62_02240;Name=PYH62_02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02240 CP118825.1 Protein Homology CDS 469965 471365 . - 0 ID=cds-WHI79671.1;Parent=gene-PYH62_02240;Dbxref=NCBI_GP:WHI79671.1;Name=WHI79671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448520.1;locus_tag=PYH62_02240;product=amino acid permease;protein_id=WHI79671.1;transl_table=11 CP118825.1 Genbank gene 471672 472484 . + . ID=gene-PYH62_02245;Name=PYH62_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02245 CP118825.1 Protein Homology CDS 471672 472484 . + 0 ID=cds-WHI79672.1;Parent=gene-PYH62_02245;Dbxref=NCBI_GP:WHI79672.1;Name=WHI79672.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454896.1;locus_tag=PYH62_02245;product=metallophosphoesterase;protein_id=WHI79672.1;transl_table=11 CP118825.1 Genbank gene 472537 473148 . - . ID=gene-PYH62_02250;Name=PYH62_02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02250 CP118825.1 Protein Homology CDS 472537 473148 . - 0 ID=cds-WHI79673.1;Parent=gene-PYH62_02250;Dbxref=NCBI_GP:WHI79673.1;Name=WHI79673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448367.1;locus_tag=PYH62_02250;product=C39 family peptidase;protein_id=WHI79673.1;transl_table=11 CP118825.1 Genbank gene 473687 474352 . - . ID=gene-PYH62_02255;Name=scdA;gbkey=Gene;gene=scdA;gene_biotype=protein_coding;locus_tag=PYH62_02255 CP118825.1 Protein Homology CDS 473687 474352 . - 0 ID=cds-WHI79674.1;Parent=gene-PYH62_02255;Dbxref=NCBI_GP:WHI79674.1;Name=WHI79674.1;gbkey=CDS;gene=scdA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834815.1;locus_tag=PYH62_02255;product=iron-sulfur cluster repair di-iron protein ScdA;protein_id=WHI79674.1;transl_table=11 CP118825.1 Genbank gene 474578 475774 . - . ID=gene-PYH62_02260;Name=PYH62_02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02260 CP118825.1 Protein Homology CDS 474578 475774 . - 0 ID=cds-WHI79675.1;Parent=gene-PYH62_02260;Dbxref=NCBI_GP:WHI79675.1;Name=WHI79675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448477.1;locus_tag=PYH62_02260;product=multidrug effflux MFS transporter;protein_id=WHI79675.1;transl_table=11 CP118825.1 Genbank gene 475915 476637 . - . ID=gene-PYH62_02265;Name=PYH62_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02265 CP118825.1 Protein Homology CDS 475915 476637 . - 0 ID=cds-WHI79676.1;Parent=gene-PYH62_02265;Dbxref=NCBI_GP:WHI79676.1;Name=WHI79676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488783.1;locus_tag=PYH62_02265;product=hypothetical protein;protein_id=WHI79676.1;transl_table=11 CP118825.1 Genbank pseudogene 476653 477799 . - . ID=gene-PYH62_02270;Name=PYH62_02270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_02270;pseudo=true CP118825.1 Protein Homology CDS 476653 477799 . - 0 ID=cds-PYH62_02270;Parent=gene-PYH62_02270;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834816.1;locus_tag=PYH62_02270;product=glycerate kinase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 477950 479446 . + . ID=gene-PYH62_02275;Name=PYH62_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02275 CP118825.1 Protein Homology CDS 477950 479446 . + 0 ID=cds-WHI79677.1;Parent=gene-PYH62_02275;Dbxref=NCBI_GP:WHI79677.1;Name=WHI79677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448402.1;locus_tag=PYH62_02275;product=hypothetical protein;protein_id=WHI79677.1;transl_table=11 CP118825.1 Genbank gene 479449 479829 . + . ID=gene-PYH62_02280;Name=PYH62_02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02280 CP118825.1 Protein Homology CDS 479449 479829 . + 0 ID=cds-WHI79678.1;Parent=gene-PYH62_02280;Dbxref=NCBI_GP:WHI79678.1;Name=WHI79678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448341.1;locus_tag=PYH62_02280;product=GtrA family protein;protein_id=WHI79678.1;transl_table=11 CP118825.1 Genbank gene 480011 480886 . + . ID=gene-PYH62_02285;Name=PYH62_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02285 CP118825.1 Protein Homology CDS 480011 480886 . + 0 ID=cds-WHI79679.1;Parent=gene-PYH62_02285;Dbxref=NCBI_GP:WHI79679.1;Name=WHI79679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174976.1;locus_tag=PYH62_02285;product=cation diffusion facilitator family transporter;protein_id=WHI79679.1;transl_table=11 CP118825.1 Genbank gene 480927 481370 . - . ID=gene-PYH62_02290;Name=PYH62_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02290 CP118825.1 Protein Homology CDS 480927 481370 . - 0 ID=cds-WHI79680.1;Parent=gene-PYH62_02290;Dbxref=NCBI_GP:WHI79680.1;Name=WHI79680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448493.1;locus_tag=PYH62_02290;product=transglycosylase;protein_id=WHI79680.1;transl_table=11 CP118825.1 Genbank gene 481719 482405 . + . ID=gene-PYH62_02295;Name=PYH62_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02295 CP118825.1 Protein Homology CDS 481719 482405 . + 0 ID=cds-WHI79681.1;Parent=gene-PYH62_02295;Dbxref=NCBI_GP:WHI79681.1;Name=WHI79681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501165.1;locus_tag=PYH62_02295;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WHI79681.1;transl_table=11 CP118825.1 Genbank gene 482539 482637 . - . ID=gene-PYH62_02300;Name=PYH62_02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02300 CP118825.1 Protein Homology CDS 482539 482637 . - 0 ID=cds-WHI79682.1;Parent=gene-PYH62_02300;Dbxref=NCBI_GP:WHI79682.1;Name=WHI79682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174973.1;locus_tag=PYH62_02300;product=putative metal homeostasis protein;protein_id=WHI79682.1;transl_table=11 CP118825.1 Genbank pseudogene 482733 484173 . + . ID=gene-PYH62_02305;Name=PYH62_02305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_02305;pseudo=true CP118825.1 Protein Homology CDS 482733 484173 . + 0 ID=cds-PYH62_02305;Parent=gene-PYH62_02305;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174972.1;locus_tag=PYH62_02305;product=MDR family MFS transporter;pseudo=true;transl_table=11 CP118825.1 Genbank gene 484292 485092 . + . ID=gene-PYH62_02310;Name=PYH62_02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02310 CP118825.1 Protein Homology CDS 484292 485092 . + 0 ID=cds-WHI79683.1;Parent=gene-PYH62_02310;Dbxref=NCBI_GP:WHI79683.1;Name=WHI79683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501161.1;locus_tag=PYH62_02310;product=transporter substrate-binding domain-containing protein;protein_id=WHI79683.1;transl_table=11 CP118825.1 Genbank gene 485073 485792 . + . ID=gene-PYH62_02315;Name=PYH62_02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02315 CP118825.1 Protein Homology CDS 485073 485792 . + 0 ID=cds-WHI80226.1;Parent=gene-PYH62_02315;Dbxref=NCBI_GP:WHI80226.1;Name=WHI80226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501160.1;locus_tag=PYH62_02315;product=amino acid ABC transporter permease;protein_id=WHI80226.1;transl_table=11 CP118825.1 Genbank gene 485789 486520 . + . ID=gene-PYH62_02320;Name=PYH62_02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02320 CP118825.1 Protein Homology CDS 485789 486520 . + 0 ID=cds-WHI79684.1;Parent=gene-PYH62_02320;Dbxref=NCBI_GP:WHI79684.1;Name=WHI79684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488805.1;locus_tag=PYH62_02320;product=amino acid ABC transporter ATP-binding protein;protein_id=WHI79684.1;transl_table=11 CP118825.1 Genbank gene 486623 487045 . - . ID=gene-PYH62_02325;Name=PYH62_02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02325 CP118825.1 Protein Homology CDS 486623 487045 . - 0 ID=cds-WHI79685.1;Parent=gene-PYH62_02325;Dbxref=NCBI_GP:WHI79685.1;Name=WHI79685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448363.1;locus_tag=PYH62_02325;product=MaoC/PaaZ C-terminal domain-containing protein;protein_id=WHI79685.1;transl_table=11 CP118825.1 Genbank gene 487086 488333 . - . ID=gene-PYH62_02330;Name=PYH62_02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02330 CP118825.1 Protein Homology CDS 487086 488333 . - 0 ID=cds-WHI79686.1;Parent=gene-PYH62_02330;Dbxref=NCBI_GP:WHI79686.1;Name=WHI79686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502565.1;locus_tag=PYH62_02330;product=aminoacyltransferase;protein_id=WHI79686.1;transl_table=11 CP118825.1 Genbank gene 488601 488960 . + . ID=gene-PYH62_02335;Name=PYH62_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02335 CP118825.1 Protein Homology CDS 488601 488960 . + 0 ID=cds-WHI79687.1;Parent=gene-PYH62_02335;Dbxref=NCBI_GP:WHI79687.1;Name=WHI79687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174967.1;locus_tag=PYH62_02335;product=DUF4467 domain-containing protein;protein_id=WHI79687.1;transl_table=11 CP118825.1 Genbank pseudogene 488985 489582 . + . ID=gene-PYH62_02340;Name=PYH62_02340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_02340;pseudo=true CP118825.1 Protein Homology CDS 488985 489582 . + 0 ID=cds-PYH62_02340;Parent=gene-PYH62_02340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488721.1;locus_tag=PYH62_02340;product=thioredoxin domain-containing protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 489883 490398 . + . ID=gene-PYH62_02345;Name=PYH62_02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02345 CP118825.1 Protein Homology CDS 489883 490398 . + 0 ID=cds-WHI79688.1;Parent=gene-PYH62_02345;Dbxref=NCBI_GP:WHI79688.1;Name=WHI79688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174965.1;locus_tag=PYH62_02345;product=YceI family protein;protein_id=WHI79688.1;transl_table=11 CP118825.1 Genbank gene 490510 490980 . + . ID=gene-PYH62_02350;Name=PYH62_02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02350 CP118825.1 Protein Homology CDS 490510 490980 . + 0 ID=cds-WHI79689.1;Parent=gene-PYH62_02350;Dbxref=NCBI_GP:WHI79689.1;Name=WHI79689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174964.1;locus_tag=PYH62_02350;product=SRPBCC domain-containing protein;protein_id=WHI79689.1;transl_table=11 CP118825.1 Genbank gene 491052 491234 . + . ID=gene-PYH62_02355;Name=PYH62_02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02355 CP118825.1 Protein Homology CDS 491052 491234 . + 0 ID=cds-WHI79690.1;Parent=gene-PYH62_02355;Dbxref=NCBI_GP:WHI79690.1;Name=WHI79690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448340.1;locus_tag=PYH62_02355;product=hypothetical protein;protein_id=WHI79690.1;transl_table=11 CP118825.1 Genbank gene 491359 492177 . + . ID=gene-PYH62_02360;Name=PYH62_02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02360 CP118825.1 Protein Homology CDS 491359 492177 . + 0 ID=cds-WHI79691.1;Parent=gene-PYH62_02360;Dbxref=NCBI_GP:WHI79691.1;Name=WHI79691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488726.1;locus_tag=PYH62_02360;product=formate/nitrite transporter family protein;protein_id=WHI79691.1;transl_table=11 CP118825.1 Genbank gene 492302 493015 . + . ID=gene-PYH62_02365;Name=PYH62_02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02365 CP118825.1 Protein Homology CDS 492302 493015 . + 0 ID=cds-WHI79692.1;Parent=gene-PYH62_02365;Dbxref=NCBI_GP:WHI79692.1;Name=WHI79692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831601.1;locus_tag=PYH62_02365;product=sirohydrochlorin chelatase;protein_id=WHI79692.1;transl_table=11 CP118825.1 Genbank gene 493226 495631 . + . ID=gene-PYH62_02370;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=PYH62_02370 CP118825.1 Protein Homology CDS 493226 495631 . + 0 ID=cds-WHI79693.1;Parent=gene-PYH62_02370;Dbxref=NCBI_GP:WHI79693.1;Name=WHI79693.1;Ontology_term=GO:0042128,GO:0008942,GO:0016491,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501146.1;locus_tag=PYH62_02370;product=nitrite reductase large subunit NirB;protein_id=WHI79693.1;transl_table=11 CP118825.1 Genbank gene 495634 495948 . + . ID=gene-PYH62_02375;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=PYH62_02375 CP118825.1 Protein Homology CDS 495634 495948 . + 0 ID=cds-WHI79694.1;Parent=gene-PYH62_02375;Dbxref=NCBI_GP:WHI79694.1;Name=WHI79694.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501145.1;locus_tag=PYH62_02375;product=nitrite reductase small subunit NirD;protein_id=WHI79694.1;transl_table=11 CP118825.1 Genbank gene 495939 496889 . + . ID=gene-PYH62_02380;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=PYH62_02380 CP118825.1 Protein Homology CDS 495939 496889 . + 0 ID=cds-WHI79695.1;Parent=gene-PYH62_02380;Dbxref=NCBI_GP:WHI79695.1;Name=WHI79695.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834826.1;locus_tag=PYH62_02380;product=uroporphyrinogen-III C-methyltransferase;protein_id=WHI79695.1;transl_table=11 CP118825.1 Genbank gene 497096 500779 . + . ID=gene-PYH62_02385;Name=PYH62_02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02385 CP118825.1 Protein Homology CDS 497096 500779 . + 0 ID=cds-WHI79696.1;Parent=gene-PYH62_02385;Dbxref=NCBI_GP:WHI79696.1;Name=WHI79696.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501143.1;locus_tag=PYH62_02385;product=nitrate reductase subunit alpha;protein_id=WHI79696.1;transl_table=11 CP118825.1 Genbank gene 500769 502328 . + . ID=gene-PYH62_02390;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=PYH62_02390 CP118825.1 Protein Homology CDS 500769 502328 . + 0 ID=cds-WHI79697.1;Parent=gene-PYH62_02390;Dbxref=NCBI_GP:WHI79697.1;Name=WHI79697.1;Ontology_term=GO:0009061,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009384084.1;locus_tag=PYH62_02390;product=nitrate reductase subunit beta;protein_id=WHI79697.1;transl_table=11 CP118825.1 Genbank gene 502321 502896 . + . ID=gene-PYH62_02395;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=PYH62_02395 CP118825.1 Protein Homology CDS 502321 502896 . + 0 ID=cds-WHI79698.1;Parent=gene-PYH62_02395;Dbxref=NCBI_GP:WHI79698.1;Name=WHI79698.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000606770.1;locus_tag=PYH62_02395;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WHI79698.1;transl_table=11 CP118825.1 Genbank gene 502889 503578 . + . ID=gene-PYH62_02400;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=PYH62_02400 CP118825.1 Protein Homology CDS 502889 503578 . + 0 ID=cds-WHI79699.1;Parent=gene-PYH62_02400;Dbxref=NCBI_GP:WHI79699.1;Name=WHI79699.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448574.1;locus_tag=PYH62_02400;product=respiratory nitrate reductase subunit gamma;protein_id=WHI79699.1;transl_table=11 CP118825.1 Genbank gene 503599 504051 . + . ID=gene-PYH62_02405;Name=nreA;gbkey=Gene;gene=nreA;gene_biotype=protein_coding;locus_tag=PYH62_02405 CP118825.1 Protein Homology CDS 503599 504051 . + 0 ID=cds-WHI79700.1;Parent=gene-PYH62_02405;Dbxref=NCBI_GP:WHI79700.1;Name=WHI79700.1;gbkey=CDS;gene=nreA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448501.1;locus_tag=PYH62_02405;product=nitrate respiration regulation accessory nitrate sensor NreA;protein_id=WHI79700.1;transl_table=11 CP118825.1 Genbank gene 504061 505095 . + . ID=gene-PYH62_02410;Name=nreB;gbkey=Gene;gene=nreB;gene_biotype=protein_coding;locus_tag=PYH62_02410 CP118825.1 Protein Homology CDS 504061 505095 . + 0 ID=cds-WHI79701.1;Parent=gene-PYH62_02410;Dbxref=NCBI_GP:WHI79701.1;Name=WHI79701.1;Note=Involved in the regulation of the the nitrate reductase operon narGHJI;gbkey=CDS;gene=nreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274984.1;locus_tag=PYH62_02410;product=nitrate respiration regulation sensor histidine kinase NreB;protein_id=WHI79701.1;transl_table=11 CP118825.1 Genbank gene 505121 505774 . + . ID=gene-PYH62_02415;Name=nreC;gbkey=Gene;gene=nreC;gene_biotype=protein_coding;locus_tag=PYH62_02415 CP118825.1 Protein Homology CDS 505121 505774 . + 0 ID=cds-WHI79702.1;Parent=gene-PYH62_02415;Dbxref=NCBI_GP:WHI79702.1;Name=WHI79702.1;Note=Involved in the regulation of the the nitrate reductase operon narGHJI;gbkey=CDS;gene=nreC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002464689.1;locus_tag=PYH62_02415;product=nitrate respiration regulation response regulator NreC;protein_id=WHI79702.1;transl_table=11 CP118825.1 Genbank gene 506031 507188 . + . ID=gene-PYH62_02420;Name=PYH62_02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02420 CP118825.1 Protein Homology CDS 506031 507188 . + 0 ID=cds-WHI79703.1;Parent=gene-PYH62_02420;Dbxref=NCBI_GP:WHI79703.1;Name=WHI79703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274986.1;locus_tag=PYH62_02420;product=NarK/NasA family nitrate transporter;protein_id=WHI79703.1;transl_table=11 CP118825.1 Genbank gene 507448 507852 . - . ID=gene-PYH62_02425;Name=PYH62_02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02425 CP118825.1 Protein Homology CDS 507448 507852 . - 0 ID=cds-WHI79704.1;Parent=gene-PYH62_02425;Dbxref=NCBI_GP:WHI79704.1;Name=WHI79704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454914.1;locus_tag=PYH62_02425;product=Hsp20 family protein;protein_id=WHI79704.1;transl_table=11 CP118825.1 Genbank gene 508086 508529 . - . ID=gene-PYH62_02430;Name=PYH62_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02430 CP118825.1 Protein Homology CDS 508086 508529 . - 0 ID=cds-WHI79705.1;Parent=gene-PYH62_02430;Dbxref=NCBI_GP:WHI79705.1;Name=WHI79705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000289215.1;locus_tag=PYH62_02430;product=MarR family transcriptional regulator;protein_id=WHI79705.1;transl_table=11 CP118825.1 Genbank gene 508811 509170 . + . ID=gene-PYH62_02435;Name=PYH62_02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02435 CP118825.1 Protein Homology CDS 508811 509170 . + 0 ID=cds-WHI79706.1;Parent=gene-PYH62_02435;Dbxref=NCBI_GP:WHI79706.1;Name=WHI79706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174954.1;locus_tag=PYH62_02435;product=DUF3139 domain-containing protein;protein_id=WHI79706.1;transl_table=11 CP118825.1 Genbank gene 509536 510813 . + . ID=gene-PYH62_02440;Name=PYH62_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02440 CP118825.1 Protein Homology CDS 509536 510813 . + 0 ID=cds-WHI79707.1;Parent=gene-PYH62_02440;Dbxref=NCBI_GP:WHI79707.1;Name=WHI79707.1;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501129.1;locus_tag=PYH62_02440;product=cation:dicarboxylase symporter family transporter;protein_id=WHI79707.1;transl_table=11 CP118825.1 Genbank gene 510941 511294 . - . ID=gene-PYH62_02445;Name=PYH62_02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02445 CP118825.1 Protein Homology CDS 510941 511294 . - 0 ID=cds-WHI79708.1;Parent=gene-PYH62_02445;Dbxref=NCBI_GP:WHI79708.1;Name=WHI79708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456647.1;locus_tag=PYH62_02445;product=DUF4889 domain-containing protein;protein_id=WHI79708.1;transl_table=11 CP118825.1 Genbank gene 511470 511892 . - . ID=gene-PYH62_02450;Name=PYH62_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02450 CP118825.1 Protein Homology CDS 511470 511892 . - 0 ID=cds-WHI79709.1;Parent=gene-PYH62_02450;Dbxref=NCBI_GP:WHI79709.1;Name=WHI79709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495111.1;locus_tag=PYH62_02450;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WHI79709.1;transl_table=11 CP118825.1 Genbank gene 511937 514042 . - . ID=gene-PYH62_02455;Name=rsp;gbkey=Gene;gene=rsp;gene_biotype=protein_coding;locus_tag=PYH62_02455 CP118825.1 Protein Homology CDS 511937 514042 . - 0 ID=cds-WHI79710.1;Parent=gene-PYH62_02455;Dbxref=NCBI_GP:WHI79710.1;Name=WHI79710.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=rsp;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834833.1;locus_tag=PYH62_02455;product=AraC family transcriptional regulator Rsp;protein_id=WHI79710.1;transl_table=11 CP118825.1 Genbank gene 515100 516542 . + . ID=gene-PYH62_02460;Name=PYH62_02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02460 CP118825.1 Protein Homology CDS 515100 516542 . + 0 ID=cds-WHI79711.1;Parent=gene-PYH62_02460;Dbxref=NCBI_GP:WHI79711.1;Name=WHI79711.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488727.1;locus_tag=PYH62_02460;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WHI79711.1;transl_table=11 CP118825.1 Genbank gene 516584 517525 . - . ID=gene-PYH62_02465;Name=PYH62_02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02465 CP118825.1 Protein Homology CDS 516584 517525 . - 0 ID=cds-WHI79712.1;Parent=gene-PYH62_02465;Dbxref=NCBI_GP:WHI79712.1;Name=WHI79712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501122.1;locus_tag=PYH62_02465;product=magnesium transporter CorA family protein;protein_id=WHI79712.1;transl_table=11 CP118825.1 Genbank gene 517550 518173 . - . ID=gene-PYH62_02470;Name=PYH62_02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02470 CP118825.1 Protein Homology CDS 517550 518173 . - 0 ID=cds-WHI79713.1;Parent=gene-PYH62_02470;Dbxref=NCBI_GP:WHI79713.1;Name=WHI79713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454918.1;locus_tag=PYH62_02470;product=TetR/AcrR family transcriptional regulator;protein_id=WHI79713.1;transl_table=11 CP118825.1 Genbank pseudogene 518323 518667 . + . ID=gene-PYH62_02475;Name=PYH62_02475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_02475;pseudo=true CP118825.1 Protein Homology CDS 518323 518667 . + 0 ID=cds-PYH62_02475;Parent=gene-PYH62_02475;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274999.1;locus_tag=PYH62_02475;product=ABC transporter permease;pseudo=true;transl_table=11 CP118825.1 Genbank pseudogene 518777 518935 . + . ID=gene-PYH62_02480;Name=PYH62_02480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_02480;pseudo=true CP118825.1 Protein Homology CDS 518777 518935 . + 0 ID=cds-PYH62_02480;Parent=gene-PYH62_02480;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015364737.1;locus_tag=PYH62_02480;product=MATE family efflux transporter;pseudo=true;transl_table=11 CP118825.1 Genbank gene 519090 520337 . + . ID=gene-PYH62_02485;Name=PYH62_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02485 CP118825.1 Protein Homology CDS 519090 520337 . + 0 ID=cds-WHI79714.1;Parent=gene-PYH62_02485;Dbxref=NCBI_GP:WHI79714.1;Name=WHI79714.1;Ontology_term=GO:0005507,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488811.1;locus_tag=PYH62_02485;product=copper resistance protein CopC;protein_id=WHI79714.1;transl_table=11 CP118825.1 Genbank gene 520354 520965 . + . ID=gene-PYH62_02490;Name=PYH62_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02490 CP118825.1 Protein Homology CDS 520354 520965 . + 0 ID=cds-WHI79715.1;Parent=gene-PYH62_02490;Dbxref=NCBI_GP:WHI79715.1;Name=WHI79715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488717.1;locus_tag=PYH62_02490;product=YcnI family protein;protein_id=WHI79715.1;transl_table=11 CP118825.1 Genbank gene 521095 521511 . + . ID=gene-PYH62_02495;Name=PYH62_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02495 CP118825.1 Protein Homology CDS 521095 521511 . + 0 ID=cds-WHI79716.1;Parent=gene-PYH62_02495;Dbxref=NCBI_GP:WHI79716.1;Name=WHI79716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174944.1;locus_tag=PYH62_02495;product=DUF2871 domain-containing protein;protein_id=WHI79716.1;transl_table=11 CP118825.1 Genbank gene 521600 522001 . + . ID=gene-PYH62_02500;Name=PYH62_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02500 CP118825.1 Protein Homology CDS 521600 522001 . + 0 ID=cds-WHI79717.1;Parent=gene-PYH62_02500;Dbxref=NCBI_GP:WHI79717.1;Name=WHI79717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448456.1;locus_tag=PYH62_02500;product=GNAT family N-acetyltransferase;protein_id=WHI79717.1;transl_table=11 CP118825.1 Genbank pseudogene 522410 538402 . + . ID=gene-PYH62_02505;Name=ebh;gbkey=Gene;gene=ebh;gene_biotype=pseudogene;locus_tag=PYH62_02505;pseudo=true CP118825.1 Protein Homology CDS 522410 538402 . + 0 ID=cds-PYH62_02505;Parent=gene-PYH62_02505;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing C-terminus;Ontology_term=GO:0006972;gbkey=CDS;gene=ebh;go_process=hyperosmotic response|0006972||IEA;inference=COORDINATES: protein motif:HMM:TIGR04264.1;locus_tag=PYH62_02505;product=hyperosmolarity resistance protein Ebh;pseudo=true;transl_table=11 CP118825.1 Genbank gene 538463 539587 . + . ID=gene-PYH62_02510;Name=PYH62_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02510 CP118825.1 Protein Homology CDS 538463 539587 . + 0 ID=cds-WHI80227.1;Parent=gene-PYH62_02510;Dbxref=NCBI_GP:WHI80227.1;Name=WHI80227.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019202.2;locus_tag=PYH62_02510;product=DUF1542 domain-containing protein;protein_id=WHI80227.1;transl_table=11 CP118825.1 Genbank gene 539678 540673 . - . ID=gene-PYH62_02515;Name=PYH62_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02515 CP118825.1 Protein Homology CDS 539678 540673 . - 0 ID=cds-WHI79718.1;Parent=gene-PYH62_02515;Dbxref=NCBI_GP:WHI79718.1;Name=WHI79718.1;Ontology_term=GO:0008152,GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174940.1;locus_tag=PYH62_02515;product=acryloyl-CoA reductase;protein_id=WHI79718.1;transl_table=11 CP118825.1 Genbank gene 540993 541847 . + . ID=gene-PYH62_02520;Name=PYH62_02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02520 CP118825.1 Protein Homology CDS 540993 541847 . + 0 ID=cds-WHI79719.1;Parent=gene-PYH62_02520;Dbxref=NCBI_GP:WHI79719.1;Name=WHI79719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000737198.1;locus_tag=PYH62_02520;product=EfeM/EfeO family lipoprotein;protein_id=WHI79719.1;transl_table=11 CP118825.1 Genbank gene 541844 543070 . + . ID=gene-PYH62_02525;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=PYH62_02525 CP118825.1 Protein Homology CDS 541844 543070 . + 0 ID=cds-WHI79720.1;Parent=gene-PYH62_02525;Dbxref=NCBI_GP:WHI79720.1;Name=WHI79720.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448553.1;locus_tag=PYH62_02525;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WHI79720.1;transl_table=11 CP118825.1 Genbank gene 543051 544781 . + . ID=gene-PYH62_02530;Name=PYH62_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02530 CP118825.1 Protein Homology CDS 543051 544781 . + 0 ID=cds-WHI79721.1;Parent=gene-PYH62_02530;Dbxref=NCBI_GP:WHI79721.1;Name=WHI79721.1;Ontology_term=GO:0034755,GO:0005381,GO:0016020,GO:0033573;gbkey=CDS;go_component=membrane|0016020||IEA,high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488812.1;locus_tag=PYH62_02530;product=FTR1 family protein;protein_id=WHI79721.1;transl_table=11 CP118825.1 Genbank gene 544851 545579 . - . ID=gene-PYH62_02535;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=PYH62_02535 CP118825.1 Protein Homology CDS 544851 545579 . - 0 ID=cds-WHI80228.1;Parent=gene-PYH62_02535;Dbxref=NCBI_GP:WHI80228.1;Name=WHI80228.1;Ontology_term=GO:0015628,GO:0005886;gbkey=CDS;gene=tatC;go_component=plasma membrane|0005886||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492225.1;locus_tag=PYH62_02535;product=twin-arginine translocase subunit TatC;protein_id=WHI80228.1;transl_table=11 CP118825.1 Genbank gene 545548 545772 . - . ID=gene-PYH62_02540;Name=PYH62_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02540 CP118825.1 Protein Homology CDS 545548 545772 . - 0 ID=cds-WHI79722.1;Parent=gene-PYH62_02540;Dbxref=NCBI_GP:WHI79722.1;Name=WHI79722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174935.1;locus_tag=PYH62_02540;product=twin-arginine translocase TatA/TatE family subunit;protein_id=WHI79722.1;transl_table=11 CP118825.1 Genbank gene 545949 546464 . + . ID=gene-PYH62_02545;Name=PYH62_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02545 CP118825.1 Protein Homology CDS 545949 546464 . + 0 ID=cds-WHI79723.1;Parent=gene-PYH62_02545;Dbxref=NCBI_GP:WHI79723.1;Name=WHI79723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834770.1;locus_tag=PYH62_02545;product=GNAT family N-acetyltransferase;protein_id=WHI79723.1;transl_table=11 CP118825.1 Genbank gene 546520 548205 . - . ID=gene-PYH62_02550;Name=PYH62_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02550 CP118825.1 Protein Homology CDS 546520 548205 . - 0 ID=cds-WHI79724.1;Parent=gene-PYH62_02550;Dbxref=NCBI_GP:WHI79724.1;Name=WHI79724.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174933.1;locus_tag=PYH62_02550;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=WHI79724.1;transl_table=11 CP118825.1 Genbank gene 548561 550162 . + . ID=gene-PYH62_02555;Name=PYH62_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02555 CP118825.1 Protein Homology CDS 548561 550162 . + 0 ID=cds-WHI79725.1;Parent=gene-PYH62_02555;Dbxref=NCBI_GP:WHI79725.1;Name=WHI79725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477096.1;locus_tag=PYH62_02555;product=L-lactate permease;protein_id=WHI79725.1;transl_table=11 CP118825.1 Genbank gene 550207 551352 . - . ID=gene-PYH62_02560;Name=PYH62_02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02560 CP118825.1 Protein Homology CDS 550207 551352 . - 0 ID=cds-WHI79726.1;Parent=gene-PYH62_02560;Dbxref=NCBI_GP:WHI79726.1;Name=WHI79726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457290.1;locus_tag=PYH62_02560;product=glycosyltransferase family 4 protein;protein_id=WHI79726.1;transl_table=11 CP118825.1 Genbank gene 551663 553141 . + . ID=gene-PYH62_02565;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=PYH62_02565 CP118825.1 Protein Homology CDS 551663 553141 . + 0 ID=cds-WHI79727.1;Parent=gene-PYH62_02565;Dbxref=NCBI_GP:WHI79727.1;Name=WHI79727.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211357.1;locus_tag=PYH62_02565;product=malate dehydrogenase (quinone);protein_id=WHI79727.1;transl_table=11 CP118825.1 Genbank gene 553193 554566 . - . ID=gene-PYH62_02570;Name=PYH62_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02570 CP118825.1 Protein Homology CDS 553193 554566 . - 0 ID=cds-WHI79728.1;Parent=gene-PYH62_02570;Dbxref=NCBI_GP:WHI79728.1;Name=WHI79728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454959.1;locus_tag=PYH62_02570;product=HAMP domain-containing sensor histidine kinase;protein_id=WHI79728.1;transl_table=11 CP118825.1 Genbank gene 554559 555233 . - . ID=gene-PYH62_02575;Name=PYH62_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02575 CP118825.1 Protein Homology CDS 554559 555233 . - 0 ID=cds-WHI79729.1;Parent=gene-PYH62_02575;Dbxref=NCBI_GP:WHI79729.1;Name=WHI79729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275022.1;locus_tag=PYH62_02575;product=response regulator transcription factor;protein_id=WHI79729.1;transl_table=11 CP118825.1 Genbank gene 555363 556418 . + . ID=gene-PYH62_02580;Name=PYH62_02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02580 CP118825.1 Protein Homology CDS 555363 556418 . + 0 ID=cds-WHI79730.1;Parent=gene-PYH62_02580;Dbxref=NCBI_GP:WHI79730.1;Name=WHI79730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275023.1;locus_tag=PYH62_02580;product=ABC transporter permease;protein_id=WHI79730.1;transl_table=11 CP118825.1 Genbank gene 556418 557083 . + . ID=gene-PYH62_02585;Name=PYH62_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02585 CP118825.1 Protein Homology CDS 556418 557083 . + 0 ID=cds-WHI79731.1;Parent=gene-PYH62_02585;Dbxref=NCBI_GP:WHI79731.1;Name=WHI79731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001229919.1;locus_tag=PYH62_02585;product=ABC transporter ATP-binding protein;protein_id=WHI79731.1;transl_table=11 CP118825.1 Genbank gene 557153 558109 . - . ID=gene-PYH62_02590;Name=PYH62_02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02590 CP118825.1 Protein Homology CDS 557153 558109 . - 0 ID=cds-WHI79732.1;Parent=gene-PYH62_02590;Dbxref=NCBI_GP:WHI79732.1;Name=WHI79732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454961.1;locus_tag=PYH62_02590;product=YdcF family protein;protein_id=WHI79732.1;transl_table=11 CP118825.1 Genbank gene 558281 558742 . + . ID=gene-PYH62_02595;Name=PYH62_02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02595 CP118825.1 Protein Homology CDS 558281 558742 . + 0 ID=cds-WHI79733.1;Parent=gene-PYH62_02595;Dbxref=NCBI_GP:WHI79733.1;Name=WHI79733.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448483.1;locus_tag=PYH62_02595;product=MarR family transcriptional regulator;protein_id=WHI79733.1;transl_table=11 CP118825.1 Genbank gene 558842 560206 . + . ID=gene-PYH62_02600;Name=PYH62_02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02600 CP118825.1 Protein Homology CDS 558842 560206 . + 0 ID=cds-WHI79734.1;Parent=gene-PYH62_02600;Dbxref=NCBI_GP:WHI79734.1;Name=WHI79734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275027.1;locus_tag=PYH62_02600;product=hypothetical protein;protein_id=WHI79734.1;transl_table=11 CP118825.1 Genbank gene 560227 561432 . + . ID=gene-PYH62_02605;Name=PYH62_02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02605 CP118825.1 Protein Homology CDS 560227 561432 . + 0 ID=cds-WHI79735.1;Parent=gene-PYH62_02605;Dbxref=NCBI_GP:WHI79735.1;Name=WHI79735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174923.1;locus_tag=PYH62_02605;product=multidrug effflux MFS transporter;protein_id=WHI79735.1;transl_table=11 CP118825.1 Genbank gene 561486 562037 . - . ID=gene-PYH62_02610;Name=PYH62_02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02610 CP118825.1 Protein Homology CDS 561486 562037 . - 0 ID=cds-WHI79736.1;Parent=gene-PYH62_02610;Dbxref=NCBI_GP:WHI79736.1;Name=WHI79736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474477.1;locus_tag=PYH62_02610;product=TetR/AcrR family transcriptional regulator C-terminal domain-containing protein;protein_id=WHI79736.1;transl_table=11 CP118825.1 Genbank gene 562158 562805 . + . ID=gene-PYH62_02615;Name=PYH62_02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02615 CP118825.1 Protein Homology CDS 562158 562805 . + 0 ID=cds-WHI79737.1;Parent=gene-PYH62_02615;Dbxref=NCBI_GP:WHI79737.1;Name=WHI79737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000738248.1;locus_tag=PYH62_02615;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WHI79737.1;transl_table=11 CP118825.1 Genbank gene 562818 564911 . + . ID=gene-PYH62_02620;Name=PYH62_02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02620 CP118825.1 Protein Homology CDS 562818 564911 . + 0 ID=cds-WHI79738.1;Parent=gene-PYH62_02620;Dbxref=NCBI_GP:WHI79738.1;Name=WHI79738.1;Ontology_term=GO:0006855,GO:0009410,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA,response to xenobiotic stimulus|0009410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174920.1;locus_tag=PYH62_02620;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WHI79738.1;transl_table=11 CP118825.1 Genbank gene 564988 565623 . - . ID=gene-PYH62_02625;Name=PYH62_02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02625 CP118825.1 Protein Homology CDS 564988 565623 . - 0 ID=cds-WHI79739.1;Parent=gene-PYH62_02625;Dbxref=NCBI_GP:WHI79739.1;Name=WHI79739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454965.1;locus_tag=PYH62_02625;product=hypothetical protein;protein_id=WHI79739.1;transl_table=11 CP118825.1 Genbank gene 565818 566717 . + . ID=gene-PYH62_02630;Name=PYH62_02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02630 CP118825.1 Protein Homology CDS 565818 566717 . + 0 ID=cds-WHI79740.1;Parent=gene-PYH62_02630;Dbxref=NCBI_GP:WHI79740.1;Name=WHI79740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174918.1;locus_tag=PYH62_02630;product=alpha/beta hydrolase;protein_id=WHI79740.1;transl_table=11 CP118825.1 Genbank gene 566769 567185 . - . ID=gene-PYH62_02635;Name=PYH62_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02635 CP118825.1 Protein Homology CDS 566769 567185 . - 0 ID=cds-WHI79741.1;Parent=gene-PYH62_02635;Dbxref=NCBI_GP:WHI79741.1;Name=WHI79741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174917.1;locus_tag=PYH62_02635;product=hypothetical protein;protein_id=WHI79741.1;transl_table=11 CP118825.1 Genbank gene 567185 567664 . - . ID=gene-PYH62_02640;Name=PYH62_02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02640 CP118825.1 Protein Homology CDS 567185 567664 . - 0 ID=cds-WHI79742.1;Parent=gene-PYH62_02640;Dbxref=NCBI_GP:WHI79742.1;Name=WHI79742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174916.1;locus_tag=PYH62_02640;product=thioesterase family protein;protein_id=WHI79742.1;transl_table=11 CP118825.1 Genbank gene 567786 568733 . + . ID=gene-PYH62_02645;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=PYH62_02645 CP118825.1 Protein Homology CDS 567786 568733 . + 0 ID=cds-WHI79743.1;Parent=gene-PYH62_02645;Dbxref=NCBI_GP:WHI79743.1;Name=WHI79743.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095;gbkey=CDS;gene=corA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447236.1;locus_tag=PYH62_02645;product=magnesium/cobalt transporter CorA;protein_id=WHI79743.1;transl_table=11 CP118825.1 Genbank gene 568768 569817 . + . ID=gene-PYH62_02650;Name=fni;gbkey=Gene;gene=fni;gene_biotype=protein_coding;locus_tag=PYH62_02650 CP118825.1 Protein Homology CDS 568768 569817 . + 0 ID=cds-WHI79744.1;Parent=gene-PYH62_02650;Dbxref=NCBI_GP:WHI79744.1;Name=WHI79744.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=fni;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501084.1;locus_tag=PYH62_02650;product=type 2 isopentenyl-diphosphate Delta-isomerase;protein_id=WHI79744.1;transl_table=11 CP118825.1 Genbank gene 569879 570487 . - . ID=gene-PYH62_02655;Name=PYH62_02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02655 CP118825.1 Protein Homology CDS 569879 570487 . - 0 ID=cds-WHI79745.1;Parent=gene-PYH62_02655;Dbxref=NCBI_GP:WHI79745.1;Name=WHI79745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501082.1;locus_tag=PYH62_02655;product=DNA-3-methyladenine glycosylase;protein_id=WHI79745.1;transl_table=11 CP118825.1 Genbank gene 570782 571108 . + . ID=gene-PYH62_02660;Name=PYH62_02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02660 CP118825.1 Protein Homology CDS 570782 571108 . + 0 ID=cds-WHI80229.1;Parent=gene-PYH62_02660;Dbxref=NCBI_GP:WHI80229.1;Name=WHI80229.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501077.1;locus_tag=PYH62_02660;product=YnfA family protein;protein_id=WHI80229.1;transl_table=11 CP118825.1 Genbank gene 571138 572148 . + . ID=gene-PYH62_02665;Name=PYH62_02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02665 CP118825.1 Protein Homology CDS 571138 572148 . + 0 ID=cds-WHI79746.1;Parent=gene-PYH62_02665;Dbxref=NCBI_GP:WHI79746.1;Name=WHI79746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174911.1;locus_tag=PYH62_02665;product=galactose mutarotase;protein_id=WHI79746.1;transl_table=11 CP118825.1 Genbank gene 572204 572860 . - . ID=gene-PYH62_02670;Name=PYH62_02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02670 CP118825.1 Protein Homology CDS 572204 572860 . - 0 ID=cds-WHI79747.1;Parent=gene-PYH62_02670;Dbxref=NCBI_GP:WHI79747.1;Name=WHI79747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488720.1;locus_tag=PYH62_02670;product=MOSC domain-containing protein;protein_id=WHI79747.1;transl_table=11 CP118825.1 Genbank gene 573021 573710 . + . ID=gene-PYH62_02675;Name=PYH62_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02675 CP118825.1 Protein Homology CDS 573021 573710 . + 0 ID=cds-WHI79748.1;Parent=gene-PYH62_02675;Dbxref=NCBI_GP:WHI79748.1;Name=WHI79748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835634.1;locus_tag=PYH62_02675;product=ribose 5-phosphate isomerase A;protein_id=WHI79748.1;transl_table=11 CP118825.1 Genbank gene 573744 574805 . - . ID=gene-PYH62_02680;Name=PYH62_02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02680 CP118825.1 Protein Homology CDS 573744 574805 . - 0 ID=cds-WHI79749.1;Parent=gene-PYH62_02680;Dbxref=NCBI_GP:WHI79749.1;Name=WHI79749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448462.1;locus_tag=PYH62_02680;product=CPBP family intramembrane metalloprotease;protein_id=WHI79749.1;transl_table=11 CP118825.1 Genbank gene 575062 575997 . + . ID=gene-PYH62_02685;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=PYH62_02685 CP118825.1 Protein Homology CDS 575062 575997 . + 0 ID=cds-WHI79750.1;Parent=gene-PYH62_02685;Dbxref=NCBI_GP:WHI79750.1;Name=WHI79750.1;Ontology_term=GO:0019556,GO:0050415;gbkey=CDS;gene=hutG;go_function=formimidoylglutamase activity|0050415||IEA;go_process=histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000277978.1;locus_tag=PYH62_02685;product=formimidoylglutamase;protein_id=WHI79750.1;transl_table=11 CP118825.1 Genbank gene 576154 577272 . + . ID=gene-PYH62_02690;Name=PYH62_02690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02690 CP118825.1 Protein Homology CDS 576154 577272 . + 0 ID=cds-WHI79751.1;Parent=gene-PYH62_02690;Dbxref=NCBI_GP:WHI79751.1;Name=WHI79751.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488744.1;locus_tag=PYH62_02690;product=amidohydrolase;protein_id=WHI79751.1;transl_table=11 CP118825.1 Genbank pseudogene 577360 578240 . + . ID=gene-PYH62_02695;Name=PYH62_02695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_02695;pseudo=true CP118825.1 Protein Homology CDS 577360 578240 . + 0 ID=cds-PYH62_02695;Parent=gene-PYH62_02695;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501065.1;locus_tag=PYH62_02695;product=SDR family oxidoreductase;pseudo=true;transl_table=11 CP118825.1 Genbank pseudogene 578318 578930 . + . ID=gene-PYH62_02700;Name=PYH62_02700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_02700;pseudo=true CP118825.1 Protein Homology CDS 578318 578930 . + 0 ID=cds-PYH62_02700;Parent=gene-PYH62_02700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488732.1;locus_tag=PYH62_02700;product=flavin reductase family protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 579027 580319 . + . ID=gene-PYH62_02705;Name=PYH62_02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02705 CP118825.1 Protein Homology CDS 579027 580319 . + 0 ID=cds-WHI79752.1;Parent=gene-PYH62_02705;Dbxref=NCBI_GP:WHI79752.1;Name=WHI79752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488813.1;locus_tag=PYH62_02705;product=Na+/H+ antiporter NhaC family protein;protein_id=WHI79752.1;transl_table=11 CP118825.1 Genbank gene 580441 580959 . + . ID=gene-PYH62_02710;Name=PYH62_02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02710 CP118825.1 Protein Homology CDS 580441 580959 . + 0 ID=cds-WHI79753.1;Parent=gene-PYH62_02710;Dbxref=NCBI_GP:WHI79753.1;Name=WHI79753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448616.1;locus_tag=PYH62_02710;product=SRPBCC domain-containing protein;protein_id=WHI79753.1;transl_table=11 CP118825.1 Genbank gene 581017 581778 . - . ID=gene-PYH62_02715;Name=PYH62_02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02715 CP118825.1 Protein Homology CDS 581017 581778 . - 0 ID=cds-WHI79754.1;Parent=gene-PYH62_02715;Dbxref=NCBI_GP:WHI79754.1;Name=WHI79754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174902.1;locus_tag=PYH62_02715;product=MurR/RpiR family transcriptional regulator;protein_id=WHI79754.1;transl_table=11 CP118825.1 Genbank gene 581985 583586 . + . ID=gene-PYH62_02720;Name=PYH62_02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02720 CP118825.1 Protein Homology CDS 581985 583586 . + 0 ID=cds-WHI79755.1;Parent=gene-PYH62_02720;Dbxref=NCBI_GP:WHI79755.1;Name=WHI79755.1;Ontology_term=GO:0015144;gbkey=CDS;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174901.1;locus_tag=PYH62_02720;product=alpha-glucoside-specific PTS transporter subunit IIBC;protein_id=WHI79755.1;transl_table=11 CP118825.1 Genbank gene 583632 584162 . - . ID=gene-PYH62_02725;Name=PYH62_02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02725 CP118825.1 Protein Homology CDS 583632 584162 . - 0 ID=cds-WHI79756.1;Parent=gene-PYH62_02725;Dbxref=NCBI_GP:WHI79756.1;Name=WHI79756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447259.1;locus_tag=PYH62_02725;product=hypothetical protein;protein_id=WHI79756.1;transl_table=11 CP118825.1 Genbank gene 584447 585361 . + . ID=gene-PYH62_02730;Name=PYH62_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02730 CP118825.1 Protein Homology CDS 584447 585361 . + 0 ID=cds-WHI79757.1;Parent=gene-PYH62_02730;Dbxref=NCBI_GP:WHI79757.1;Name=WHI79757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174899.1;locus_tag=PYH62_02730;product=bile acid:sodium symporter family protein;protein_id=WHI79757.1;transl_table=11 CP118825.1 Genbank gene 585411 586055 . + . ID=gene-PYH62_02735;Name=PYH62_02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02735 CP118825.1 Protein Homology CDS 585411 586055 . + 0 ID=cds-WHI79758.1;Parent=gene-PYH62_02735;Dbxref=NCBI_GP:WHI79758.1;Name=WHI79758.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174898.1;locus_tag=PYH62_02735;product=HAD-IA family hydrolase;protein_id=WHI79758.1;transl_table=11 CP118825.1 Genbank gene 586061 586252 . + . ID=gene-PYH62_02740;Name=PYH62_02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02740 CP118825.1 Protein Homology CDS 586061 586252 . + 0 ID=cds-WHI79759.1;Parent=gene-PYH62_02740;Dbxref=NCBI_GP:WHI79759.1;Name=WHI79759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014532684.1;locus_tag=PYH62_02740;product=hypothetical protein;protein_id=WHI79759.1;transl_table=11 CP118825.1 Genbank gene 586309 586497 . - . ID=gene-PYH62_02745;Name=PYH62_02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02745 CP118825.1 Protein Homology CDS 586309 586497 . - 0 ID=cds-WHI79760.1;Parent=gene-PYH62_02745;Dbxref=NCBI_GP:WHI79760.1;Name=WHI79760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447263.1;locus_tag=PYH62_02745;product=hypothetical protein;protein_id=WHI79760.1;transl_table=11 CP118825.1 Genbank gene 586504 586848 . - . ID=gene-PYH62_02750;Name=PYH62_02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02750 CP118825.1 Protein Homology CDS 586504 586848 . - 0 ID=cds-WHI79761.1;Parent=gene-PYH62_02750;Dbxref=NCBI_GP:WHI79761.1;Name=WHI79761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448336.1;locus_tag=PYH62_02750;product=hypothetical protein;protein_id=WHI79761.1;transl_table=11 CP118825.1 Genbank gene 587175 588563 . + . ID=gene-PYH62_02755;Name=PYH62_02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02755 CP118825.1 Protein Homology CDS 587175 588563 . + 0 ID=cds-WHI79762.1;Parent=gene-PYH62_02755;Dbxref=NCBI_GP:WHI79762.1;Name=WHI79762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488730.1;locus_tag=PYH62_02755;product=amino acid permease;protein_id=WHI79762.1;transl_table=11 CP118825.1 Genbank gene 588779 589651 . - . ID=gene-PYH62_02760;Name=PYH62_02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02760 CP118825.1 Protein Homology CDS 588779 589651 . - 0 ID=cds-WHI79763.1;Parent=gene-PYH62_02760;Dbxref=NCBI_GP:WHI79763.1;Name=WHI79763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469323.1;locus_tag=PYH62_02760;product=MurR/RpiR family transcriptional regulator;protein_id=WHI79763.1;transl_table=11 CP118825.1 Genbank gene 589975 590328 . - . ID=gene-PYH62_02765;Name=PYH62_02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02765 CP118825.1 Protein Homology CDS 589975 590328 . - 0 ID=cds-WHI79764.1;Parent=gene-PYH62_02765;Dbxref=NCBI_GP:WHI79764.1;Name=WHI79764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448527.1;locus_tag=PYH62_02765;product=hypothetical protein;protein_id=WHI79764.1;transl_table=11 CP118825.1 Genbank gene 590434 591129 . - . ID=gene-PYH62_02770;Name=PYH62_02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02770 CP118825.1 Protein Homology CDS 590434 591129 . - 0 ID=cds-WHI79765.1;Parent=gene-PYH62_02770;Dbxref=NCBI_GP:WHI79765.1;Name=WHI79765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488630.1;locus_tag=PYH62_02770;product=HTH domain-containing protein;protein_id=WHI79765.1;transl_table=11 CP118825.1 Genbank gene 591498 592277 . + . ID=gene-PYH62_02775;Name=PYH62_02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02775 CP118825.1 Protein Homology CDS 591498 592277 . + 0 ID=cds-WHI79766.1;Parent=gene-PYH62_02775;Dbxref=NCBI_GP:WHI79766.1;Name=WHI79766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448358.1;locus_tag=PYH62_02775;product=inositol monophosphatase family protein;protein_id=WHI79766.1;transl_table=11 CP118825.1 Genbank gene 592393 593340 . + . ID=gene-PYH62_02780;Name=PYH62_02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02780 CP118825.1 Protein Homology CDS 592393 593340 . + 0 ID=cds-WHI79767.1;Parent=gene-PYH62_02780;Dbxref=NCBI_GP:WHI79767.1;Name=WHI79767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448478.1;locus_tag=PYH62_02780;product=LCP family protein;protein_id=WHI79767.1;transl_table=11 CP118825.1 Genbank gene 593595 596546 . + . ID=gene-PYH62_02785;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=PYH62_02785 CP118825.1 Protein Homology CDS 593595 596546 . + 0 ID=cds-WHI79768.1;Parent=gene-PYH62_02785;Dbxref=NCBI_GP:WHI79768.1;Name=WHI79768.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457981.1;locus_tag=PYH62_02785;product=formate dehydrogenase subunit alpha;protein_id=WHI79768.1;transl_table=11 CP118825.1 Genbank gene 596548 597015 . + . ID=gene-PYH62_02790;Name=PYH62_02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02790 CP118825.1 Protein Homology CDS 596548 597015 . + 0 ID=cds-WHI79769.1;Parent=gene-PYH62_02790;Dbxref=NCBI_GP:WHI79769.1;Name=WHI79769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448524.1;locus_tag=PYH62_02790;product=DUF1641 domain-containing protein;protein_id=WHI79769.1;transl_table=11 CP118825.1 Genbank gene 597181 597402 . + . ID=gene-PYH62_02795;Name=PYH62_02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02795 CP118825.1 Protein Homology CDS 597181 597402 . + 0 ID=cds-WHI80230.1;Parent=gene-PYH62_02795;Dbxref=NCBI_GP:WHI80230.1;Name=WHI80230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448552.1;locus_tag=PYH62_02795;product=hypothetical protein;protein_id=WHI80230.1;transl_table=11 CP118825.1 Genbank gene 597426 598217 . + . ID=gene-PYH62_02800;Name=PYH62_02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02800 CP118825.1 Protein Homology CDS 597426 598217 . + 0 ID=cds-WHI79770.1;Parent=gene-PYH62_02800;Dbxref=NCBI_GP:WHI79770.1;Name=WHI79770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454989.1;locus_tag=PYH62_02800;product=N-acetylglucosaminidase;protein_id=WHI79770.1;transl_table=11 CP118825.1 Genbank pseudogene 598238 599363 . + . ID=gene-PYH62_02805;Name=PYH62_02805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_02805;pseudo=true CP118825.1 Protein Homology CDS 598238 599363 . + 0 ID=cds-PYH62_02805;Parent=gene-PYH62_02805;Note=frameshifted;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000684156.1;locus_tag=PYH62_02805;product=FAD-dependent monooxygenase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 599420 600379 . - . ID=gene-PYH62_02810;Name=PYH62_02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02810 CP118825.1 Protein Homology CDS 599420 600379 . - 0 ID=cds-WHI79771.1;Parent=gene-PYH62_02810;Dbxref=NCBI_GP:WHI79771.1;Name=WHI79771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448389.1;locus_tag=PYH62_02810;product=2-hydroxyacid dehydrogenase family protein;protein_id=WHI79771.1;transl_table=11 CP118825.1 Genbank gene 600459 600773 . - . ID=gene-PYH62_02815;Name=PYH62_02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02815 CP118825.1 Protein Homology CDS 600459 600773 . - 0 ID=cds-WHI79772.1;Parent=gene-PYH62_02815;Dbxref=NCBI_GP:WHI79772.1;Name=WHI79772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454990.1;locus_tag=PYH62_02815;product=multidrug efflux SMR transporter;protein_id=WHI79772.1;transl_table=11 CP118825.1 Genbank gene 600775 601104 . - . ID=gene-PYH62_02820;Name=PYH62_02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02820 CP118825.1 Protein Homology CDS 600775 601104 . - 0 ID=cds-WHI79773.1;Parent=gene-PYH62_02820;Dbxref=NCBI_GP:WHI79773.1;Name=WHI79773.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174883.1;locus_tag=PYH62_02820;product=SMR family transporter;protein_id=WHI79773.1;transl_table=11 CP118825.1 Genbank pseudogene 601309 601470 . - . ID=gene-PYH62_02825;Name=PYH62_02825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_02825;pseudo=true CP118825.1 Protein Homology CDS 601309 601470 . - 0 ID=cds-PYH62_02825;Parent=gene-PYH62_02825;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496352.1;locus_tag=PYH62_02825;product=CHAP domain-containing protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 602006 603076 . + . ID=gene-PYH62_02830;Name=PYH62_02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02830 CP118825.1 Protein Homology CDS 602006 603076 . + 0 ID=cds-WHI79774.1;Parent=gene-PYH62_02830;Dbxref=NCBI_GP:WHI79774.1;Name=WHI79774.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830031.1;locus_tag=PYH62_02830;product=NAD/NADP octopine/nopaline dehydrogenase family protein;protein_id=WHI79774.1;transl_table=11 CP118825.1 Genbank pseudogene 603133 604519 . + . ID=gene-PYH62_02835;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=pseudogene;locus_tag=PYH62_02835;pseudo=true CP118825.1 Protein Homology CDS 603133 604519 . + 0 ID=cds-PYH62_02835;Parent=gene-PYH62_02835;Note=frameshifted;Ontology_term=GO:0006814,GO:1902600,GO:0015385;gbkey=CDS;gene=nhaC;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448535.1;locus_tag=PYH62_02835;product=Na+/H+ antiporter NhaC;pseudo=true;transl_table=11 CP118825.1 Genbank gene 604822 605598 . - . ID=gene-PYH62_02840;Name=PYH62_02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02840 CP118825.1 Protein Homology CDS 604822 605598 . - 0 ID=cds-WHI79775.1;Parent=gene-PYH62_02840;Dbxref=NCBI_GP:WHI79775.1;Name=WHI79775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000717383.1;locus_tag=PYH62_02840;product=CHAP domain-containing protein;protein_id=WHI79775.1;transl_table=11 CP118825.1 Genbank gene 606331 607056 . + . ID=gene-PYH62_02845;Name=PYH62_02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02845 CP118825.1 Protein Homology CDS 606331 607056 . + 0 ID=cds-WHI79776.1;Parent=gene-PYH62_02845;Dbxref=NCBI_GP:WHI79776.1;Name=WHI79776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448325.1;locus_tag=PYH62_02845;product=AraC family transcriptional regulator;protein_id=WHI79776.1;transl_table=11 CP118825.1 Genbank gene 607234 607962 . + . ID=gene-PYH62_02850;Name=PYH62_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02850 CP118825.1 Protein Homology CDS 607234 607962 . + 0 ID=cds-WHI79777.1;Parent=gene-PYH62_02850;Dbxref=NCBI_GP:WHI79777.1;Name=WHI79777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835266.1;locus_tag=PYH62_02850;product=MarR family transcriptional regulator;protein_id=WHI79777.1;transl_table=11 CP118825.1 Genbank gene 608244 608588 . + . ID=gene-PYH62_02855;Name=PYH62_02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02855 CP118825.1 Protein Homology CDS 608244 608588 . + 0 ID=cds-WHI79778.1;Parent=gene-PYH62_02855;Dbxref=NCBI_GP:WHI79778.1;Name=WHI79778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832412.1;locus_tag=PYH62_02855;product=MarR family transcriptional regulator;protein_id=WHI79778.1;transl_table=11 CP118825.1 Genbank gene 608734 609879 . + . ID=gene-PYH62_02860;Name=PYH62_02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02860 CP118825.1 Protein Homology CDS 608734 609879 . + 0 ID=cds-WHI79779.1;Parent=gene-PYH62_02860;Dbxref=NCBI_GP:WHI79779.1;Name=WHI79779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174876.1;locus_tag=PYH62_02860;product=acyl-CoA/acyl-ACP dehydrogenase;protein_id=WHI79779.1;transl_table=11 CP118825.1 Genbank pseudogene 609970 610910 . + . ID=gene-PYH62_02865;Name=PYH62_02865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_02865;pseudo=true CP118825.1 Protein Homology CDS 609970 610910 . + 0 ID=cds-PYH62_02865;Parent=gene-PYH62_02865;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454992.1;locus_tag=PYH62_02865;product=nucleoside hydrolase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 610985 611530 . + . ID=gene-PYH62_02870;Name=PYH62_02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02870 CP118825.1 Protein Homology CDS 610985 611530 . + 0 ID=cds-WHI79780.1;Parent=gene-PYH62_02870;Dbxref=NCBI_GP:WHI79780.1;Name=WHI79780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174874.1;locus_tag=PYH62_02870;product=biotin transporter BioY;protein_id=WHI79780.1;transl_table=11 CP118825.1 Genbank gene 611566 612330 . + . ID=gene-PYH62_02875;Name=PYH62_02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02875 CP118825.1 Protein Homology CDS 611566 612330 . + 0 ID=cds-WHI79781.1;Parent=gene-PYH62_02875;Dbxref=NCBI_GP:WHI79781.1;Name=WHI79781.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835263.1;locus_tag=PYH62_02875;product=GNAT family N-acetyltransferase;protein_id=WHI79781.1;transl_table=11 CP118825.1 Genbank gene 612369 613163 . - . ID=gene-PYH62_02880;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=PYH62_02880 CP118825.1 Protein Homology CDS 612369 613163 . - 0 ID=cds-WHI79782.1;Parent=gene-PYH62_02880;Dbxref=NCBI_GP:WHI79782.1;Name=WHI79782.1;Ontology_term=GO:0009061,GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275095.1;locus_tag=PYH62_02880;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WHI79782.1;transl_table=11 CP118825.1 Genbank gene 613351 614142 . + . ID=gene-PYH62_02885;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=PYH62_02885 CP118825.1 Protein Homology CDS 613351 614142 . + 0 ID=cds-WHI79783.1;Parent=gene-PYH62_02885;Dbxref=NCBI_GP:WHI79783.1;Name=WHI79783.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174871.1;locus_tag=PYH62_02885;product=molybdate ABC transporter substrate-binding protein;protein_id=WHI79783.1;transl_table=11 CP118825.1 Genbank gene 614154 614825 . + . ID=gene-PYH62_02890;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=PYH62_02890 CP118825.1 Protein Homology CDS 614154 614825 . + 0 ID=cds-WHI79784.1;Parent=gene-PYH62_02890;Dbxref=NCBI_GP:WHI79784.1;Name=WHI79784.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501010.1;locus_tag=PYH62_02890;product=molybdate ABC transporter permease subunit;protein_id=WHI79784.1;transl_table=11 CP118825.1 Genbank gene 614826 615431 . + . ID=gene-PYH62_02895;Name=PYH62_02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02895 CP118825.1 Protein Homology CDS 614826 615431 . + 0 ID=cds-WHI79785.1;Parent=gene-PYH62_02895;Dbxref=NCBI_GP:WHI79785.1;Name=WHI79785.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174869.1;locus_tag=PYH62_02895;product=ATP-binding cassette domain-containing protein;protein_id=WHI79785.1;transl_table=11 CP118825.1 Genbank gene 615533 616537 . + . ID=gene-PYH62_02900;Name=PYH62_02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02900 CP118825.1 Protein Homology CDS 615533 616537 . + 0 ID=cds-WHI79786.1;Parent=gene-PYH62_02900;Dbxref=NCBI_GP:WHI79786.1;Name=WHI79786.1;Ontology_term=GO:0008641;gbkey=CDS;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017431689.1;locus_tag=PYH62_02900;product=ThiF family adenylyltransferase;protein_id=WHI79786.1;transl_table=11 CP118825.1 Genbank gene 616551 617057 . + . ID=gene-PYH62_02905;Name=PYH62_02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02905 CP118825.1 Protein Homology CDS 616551 617057 . + 0 ID=cds-WHI80231.1;Parent=gene-PYH62_02905;Dbxref=NCBI_GP:WHI80231.1;Name=WHI80231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174867.1;locus_tag=PYH62_02905;product=molybdenum cofactor biosynthesis protein MoaB;protein_id=WHI80231.1;transl_table=11 CP118825.1 Genbank gene 617145 617639 . - . ID=gene-PYH62_02910;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=PYH62_02910 CP118825.1 Protein Homology CDS 617145 617639 . - 0 ID=cds-WHI79787.1;Parent=gene-PYH62_02910;Dbxref=NCBI_GP:WHI79787.1;Name=WHI79787.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaC;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448592.1;locus_tag=PYH62_02910;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WHI79787.1;transl_table=11 CP118825.1 Genbank gene 617782 619041 . + . ID=gene-PYH62_02915;Name=PYH62_02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02915 CP118825.1 Protein Homology CDS 617782 619041 . + 0 ID=cds-WHI79788.1;Parent=gene-PYH62_02915;Dbxref=NCBI_GP:WHI79788.1;Name=WHI79788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501005.1;locus_tag=PYH62_02915;product=molybdopterin molybdotransferase MoeA;protein_id=WHI79788.1;transl_table=11 CP118825.1 Genbank gene 619038 619529 . + . ID=gene-PYH62_02920;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=PYH62_02920 CP118825.1 Protein Homology CDS 619038 619529 . + 0 ID=cds-WHI79789.1;Parent=gene-PYH62_02920;Dbxref=NCBI_GP:WHI79789.1;Name=WHI79789.1;Ontology_term=GO:0006777,GO:0003824,GO:0005525;gbkey=CDS;gene=mobB;go_function=catalytic activity|0003824||IEA,GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174864.1;locus_tag=PYH62_02920;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=WHI79789.1;transl_table=11 CP118825.1 Genbank gene 619516 619965 . + . ID=gene-PYH62_02925;Name=PYH62_02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02925 CP118825.1 Protein Homology CDS 619516 619965 . + 0 ID=cds-WHI79790.1;Parent=gene-PYH62_02925;Dbxref=NCBI_GP:WHI79790.1;Name=WHI79790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174863.1;locus_tag=PYH62_02925;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WHI79790.1;transl_table=11 CP118825.1 Genbank gene 619966 620199 . + . ID=gene-PYH62_02930;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=PYH62_02930 CP118825.1 Protein Homology CDS 619966 620199 . + 0 ID=cds-WHI79791.1;Parent=gene-PYH62_02930;Dbxref=NCBI_GP:WHI79791.1;Name=WHI79791.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454999.1;locus_tag=PYH62_02930;product=molybdopterin converting factor subunit 1;protein_id=WHI79791.1;transl_table=11 CP118825.1 Genbank gene 620202 620807 . + . ID=gene-PYH62_02935;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=PYH62_02935 CP118825.1 Protein Homology CDS 620202 620807 . + 0 ID=cds-WHI79792.1;Parent=gene-PYH62_02935;Dbxref=NCBI_GP:WHI79792.1;Name=WHI79792.1;gbkey=CDS;gene=mobA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174861.1;locus_tag=PYH62_02935;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WHI79792.1;transl_table=11 CP118825.1 Genbank gene 620822 621844 . + . ID=gene-PYH62_02940;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=PYH62_02940 CP118825.1 Protein Homology CDS 620822 621844 . + 0 ID=cds-WHI79793.1;Parent=gene-PYH62_02940;Dbxref=NCBI_GP:WHI79793.1;Name=WHI79793.1;Ontology_term=GO:0006777,GO:0051539;gbkey=CDS;gene=moaA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501000.1;locus_tag=PYH62_02940;product=GTP 3'%2C8-cyclase MoaA;protein_id=WHI79793.1;transl_table=11 CP118825.1 Genbank gene 622077 622427 . + . ID=gene-PYH62_02945;Name=PYH62_02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02945 CP118825.1 Protein Homology CDS 622077 622427 . + 0 ID=cds-WHI79794.1;Parent=gene-PYH62_02945;Dbxref=NCBI_GP:WHI79794.1;Name=WHI79794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500996.1;locus_tag=PYH62_02945;product=SarA family transcriptional regulator;protein_id=WHI79794.1;transl_table=11 CP118825.1 Genbank pseudogene 622502 623708 . - . ID=gene-PYH62_02950;Name=PYH62_02950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_02950;pseudo=true CP118825.1 Protein Homology CDS 622502 623708 . - 0 ID=cds-PYH62_02950;Parent=gene-PYH62_02950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503707.1;locus_tag=PYH62_02950;product=MFS transporter;pseudo=true;transl_table=11 CP118825.1 Genbank gene 623695 624138 . - . ID=gene-PYH62_02955;Name=PYH62_02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02955 CP118825.1 Protein Homology CDS 623695 624138 . - 0 ID=cds-WHI79795.1;Parent=gene-PYH62_02955;Dbxref=NCBI_GP:WHI79795.1;Name=WHI79795.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455002.1;locus_tag=PYH62_02955;product=winged helix DNA-binding protein;protein_id=WHI79795.1;transl_table=11 CP118825.1 Genbank gene 624309 625079 . + . ID=gene-PYH62_02960;Name=PYH62_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02960 CP118825.1 Protein Homology CDS 624309 625079 . + 0 ID=cds-WHI79796.1;Parent=gene-PYH62_02960;Dbxref=NCBI_GP:WHI79796.1;Name=WHI79796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174856.1;locus_tag=PYH62_02960;product=VOC family protein;protein_id=WHI79796.1;transl_table=11 CP118825.1 Genbank gene 625494 626756 . + . ID=gene-PYH62_02965;Name=PYH62_02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02965 CP118825.1 Protein Homology CDS 625494 626756 . + 0 ID=cds-WHI79797.1;Parent=gene-PYH62_02965;Dbxref=NCBI_GP:WHI79797.1;Name=WHI79797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500991.1;locus_tag=PYH62_02965;product=lipid II:glycine glycyltransferase FemX;protein_id=WHI79797.1;transl_table=11 CP118825.1 Genbank gene 626863 630036 . + . ID=gene-PYH62_02970;Name=PYH62_02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02970 CP118825.1 Protein Homology CDS 626863 630036 . + 0 ID=cds-WHI79798.1;Parent=gene-PYH62_02970;Dbxref=NCBI_GP:WHI79798.1;Name=WHI79798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000592290.1;locus_tag=PYH62_02970;product=efflux RND transporter permease subunit;protein_id=WHI79798.1;transl_table=11 CP118825.1 Genbank gene 630104 630421 . - . ID=gene-PYH62_02975;Name=mspA;gbkey=Gene;gene=mspA;gene_biotype=protein_coding;locus_tag=PYH62_02975 CP118825.1 Protein Homology CDS 630104 630421 . - 0 ID=cds-WHI79799.1;Parent=gene-PYH62_02975;Dbxref=NCBI_GP:WHI79799.1;Name=WHI79799.1;gbkey=CDS;gene=mspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113631.1;locus_tag=PYH62_02975;product=membrane stabilizing protein MspA;protein_id=WHI79799.1;transl_table=11 CP118825.1 Genbank gene 630495 630662 . - . ID=gene-PYH62_02980;Name=PYH62_02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02980 CP118825.1 Protein Homology CDS 630495 630662 . - 0 ID=cds-WHI79800.1;Parent=gene-PYH62_02980;Dbxref=NCBI_GP:WHI79800.1;Name=WHI79800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448622.1;locus_tag=PYH62_02980;product=SE1832 family protein;protein_id=WHI79800.1;transl_table=11 CP118825.1 Genbank gene 630795 631703 . + . ID=gene-PYH62_02985;Name=PYH62_02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02985 CP118825.1 Protein Homology CDS 630795 631703 . + 0 ID=cds-WHI79801.1;Parent=gene-PYH62_02985;Dbxref=NCBI_GP:WHI79801.1;Name=WHI79801.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002487080.1;locus_tag=PYH62_02985;product=AEC family transporter;protein_id=WHI79801.1;transl_table=11 CP118825.1 Genbank gene 631772 632563 . - . ID=gene-PYH62_02990;Name=PYH62_02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02990 CP118825.1 Protein Homology CDS 631772 632563 . - 0 ID=cds-WHI79802.1;Parent=gene-PYH62_02990;Dbxref=NCBI_GP:WHI79802.1;Name=WHI79802.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829726.1;locus_tag=PYH62_02990;product=glucose 1-dehydrogenase;protein_id=WHI79802.1;transl_table=11 CP118825.1 Genbank gene 632585 633448 . - . ID=gene-PYH62_02995;Name=PYH62_02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_02995 CP118825.1 Protein Homology CDS 632585 633448 . - 0 ID=cds-WHI79803.1;Parent=gene-PYH62_02995;Dbxref=NCBI_GP:WHI79803.1;Name=WHI79803.1;Ontology_term=GO:0034219,GO:0015144,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=carbohydrate transmembrane transport|0034219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500985.1;locus_tag=PYH62_02995;product=GRP family sugar transporter;protein_id=WHI79803.1;transl_table=11 CP118825.1 Genbank gene 633735 635870 . + . ID=gene-PYH62_03000;Name=PYH62_03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03000 CP118825.1 Protein Homology CDS 633735 635870 . + 0 ID=cds-WHI79804.1;Parent=gene-PYH62_03000;Dbxref=NCBI_GP:WHI79804.1;Name=WHI79804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174848.1;locus_tag=PYH62_03000;product=DNA topoisomerase III;protein_id=WHI79804.1;transl_table=11 CP118825.1 Genbank pseudogene 635983 637318 . + . ID=gene-PYH62_03005;Name=PYH62_03005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_03005;pseudo=true CP118825.1 Protein Homology CDS 635983 637318 . + 0 ID=cds-PYH62_03005;Parent=gene-PYH62_03005;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000800694.1;locus_tag=PYH62_03005;product=NCS2 family permease;pseudo=true;transl_table=11 CP118825.1 Genbank gene 637287 638993 . - . ID=gene-PYH62_03010;Name=PYH62_03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03010 CP118825.1 Protein Homology CDS 637287 638993 . - 0 ID=cds-WHI79805.1;Parent=gene-PYH62_03010;Dbxref=NCBI_GP:WHI79805.1;Name=WHI79805.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497483.1;locus_tag=PYH62_03010;product=IS1182 family transposase;protein_id=WHI79805.1;transl_table=11 CP118825.1 Genbank gene 639283 639672 . - . ID=gene-PYH62_03015;Name=PYH62_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03015 CP118825.1 Protein Homology CDS 639283 639672 . - 0 ID=cds-WHI79806.1;Parent=gene-PYH62_03015;Dbxref=NCBI_GP:WHI79806.1;Name=WHI79806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835779.1;locus_tag=PYH62_03015;product=hypothetical protein;protein_id=WHI79806.1;transl_table=11 CP118825.1 Genbank gene 640057 640365 . + . ID=gene-PYH62_03020;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=PYH62_03020 CP118825.1 Protein Homology CDS 640057 640365 . + 0 ID=cds-WHI79807.1;Parent=gene-PYH62_03020;Dbxref=NCBI_GP:WHI79807.1;Name=WHI79807.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001118669.1;locus_tag=PYH62_03020;product=30S ribosomal protein S10;protein_id=WHI79807.1;transl_table=11 CP118825.1 Genbank gene 640393 641055 . + . ID=gene-PYH62_03025;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=PYH62_03025 CP118825.1 Protein Homology CDS 640393 641055 . + 0 ID=cds-WHI79808.1;Parent=gene-PYH62_03025;Dbxref=NCBI_GP:WHI79808.1;Name=WHI79808.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000160215.1;locus_tag=PYH62_03025;product=50S ribosomal protein L3;protein_id=WHI79808.1;transl_table=11 CP118825.1 Genbank gene 641083 641706 . + . ID=gene-PYH62_03030;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=PYH62_03030 CP118825.1 Protein Homology CDS 641083 641706 . + 0 ID=cds-WHI79809.1;Parent=gene-PYH62_03030;Dbxref=NCBI_GP:WHI79809.1;Name=WHI79809.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900976.1;locus_tag=PYH62_03030;product=50S ribosomal protein L4;protein_id=WHI79809.1;transl_table=11 CP118825.1 Genbank gene 641706 641981 . + . ID=gene-PYH62_03035;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=PYH62_03035 CP118825.1 Protein Homology CDS 641706 641981 . + 0 ID=cds-WHI79810.1;Parent=gene-PYH62_03035;Dbxref=NCBI_GP:WHI79810.1;Name=WHI79810.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002506966.1;locus_tag=PYH62_03035;product=50S ribosomal protein L23;protein_id=WHI79810.1;transl_table=11 CP118825.1 Genbank gene 642018 642851 . + . ID=gene-PYH62_03040;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=PYH62_03040 CP118825.1 Protein Homology CDS 642018 642851 . + 0 ID=cds-WHI79811.1;Parent=gene-PYH62_03040;Dbxref=NCBI_GP:WHI79811.1;Name=WHI79811.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplB;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500976.1;locus_tag=PYH62_03040;product=50S ribosomal protein L2;protein_id=WHI79811.1;transl_table=11 CP118825.1 Genbank gene 642916 643194 . + . ID=gene-PYH62_03045;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=PYH62_03045 CP118825.1 Protein Homology CDS 642916 643194 . + 0 ID=cds-WHI79812.1;Parent=gene-PYH62_03045;Dbxref=NCBI_GP:WHI79812.1;Name=WHI79812.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsS;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000533765.1;locus_tag=PYH62_03045;product=30S ribosomal protein S19;protein_id=WHI79812.1;transl_table=11 CP118825.1 Genbank pseudogene 643225 643579 . + . ID=gene-PYH62_03050;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=pseudogene;locus_tag=PYH62_03050;pseudo=true CP118825.1 Protein Homology CDS 643225 643579 . + 0 ID=cds-PYH62_03050;Parent=gene-PYH62_03050;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplV;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000387528.1;locus_tag=PYH62_03050;product=50S ribosomal protein L22;pseudo=true;transl_table=11 CP118825.1 Genbank gene 643603 644256 . + . ID=gene-PYH62_03055;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=PYH62_03055 CP118825.1 Protein Homology CDS 643603 644256 . + 0 ID=cds-WHI79813.1;Parent=gene-PYH62_03055;Dbxref=NCBI_GP:WHI79813.1;Name=WHI79813.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsC;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500973.1;locus_tag=PYH62_03055;product=30S ribosomal protein S3;protein_id=WHI79813.1;transl_table=11 CP118825.1 Genbank gene 644259 644693 . + . ID=gene-PYH62_03060;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=PYH62_03060 CP118825.1 Protein Homology CDS 644259 644693 . + 0 ID=cds-WHI79814.1;Parent=gene-PYH62_03060;Dbxref=NCBI_GP:WHI79814.1;Name=WHI79814.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplP;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829782.1;locus_tag=PYH62_03060;product=50S ribosomal protein L16;protein_id=WHI79814.1;transl_table=11 CP118825.1 Genbank gene 644683 644892 . + . ID=gene-PYH62_03065;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=PYH62_03065 CP118825.1 Protein Homology CDS 644683 644892 . + 0 ID=cds-WHI79815.1;Parent=gene-PYH62_03065;Dbxref=NCBI_GP:WHI79815.1;Name=WHI79815.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmC;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002509269.1;locus_tag=PYH62_03065;product=50S ribosomal protein L29;protein_id=WHI79815.1;transl_table=11 CP118825.1 Genbank gene 644919 645182 . + . ID=gene-PYH62_03070;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=PYH62_03070 CP118825.1 Protein Homology CDS 644919 645182 . + 0 ID=cds-WHI79816.1;Parent=gene-PYH62_03070;Dbxref=NCBI_GP:WHI79816.1;Name=WHI79816.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011983253.1;locus_tag=PYH62_03070;product=30S ribosomal protein S17;protein_id=WHI79816.1;transl_table=11 CP118825.1 Genbank gene 645214 645582 . + . ID=gene-PYH62_03075;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=PYH62_03075 CP118825.1 Protein Homology CDS 645214 645582 . + 0 ID=cds-WHI79817.1;Parent=gene-PYH62_03075;Dbxref=NCBI_GP:WHI79817.1;Name=WHI79817.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplN;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012727667.1;locus_tag=PYH62_03075;product=50S ribosomal protein L14;protein_id=WHI79817.1;transl_table=11 CP118825.1 Genbank gene 645618 645935 . + . ID=gene-PYH62_03080;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=PYH62_03080 CP118825.1 Protein Homology CDS 645618 645935 . + 0 ID=cds-WHI79818.1;Parent=gene-PYH62_03080;Dbxref=NCBI_GP:WHI79818.1;Name=WHI79818.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplX;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500968.1;locus_tag=PYH62_03080;product=50S ribosomal protein L24;protein_id=WHI79818.1;transl_table=11 CP118825.1 Genbank gene 645961 646500 . + . ID=gene-PYH62_03085;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=PYH62_03085 CP118825.1 Protein Homology CDS 645961 646500 . + 0 ID=cds-WHI79819.1;Parent=gene-PYH62_03085;Dbxref=NCBI_GP:WHI79819.1;Name=WHI79819.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275133.1;locus_tag=PYH62_03085;product=50S ribosomal protein L5;protein_id=WHI79819.1;transl_table=11 CP118825.1 Genbank gene 646523 646708 . + . ID=gene-PYH62_03090;Name=PYH62_03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03090 CP118825.1 Protein Homology CDS 646523 646708 . + 0 ID=cds-WHI79820.1;Parent=gene-PYH62_03090;Dbxref=NCBI_GP:WHI79820.1;Name=WHI79820.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1;locus_tag=PYH62_03090;product=type Z 30S ribosomal protein S14;protein_id=WHI79820.1;transl_table=11 CP118825.1 Genbank gene 646740 647138 . + . ID=gene-PYH62_03095;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=PYH62_03095 CP118825.1 Protein Homology CDS 646740 647138 . + 0 ID=cds-WHI79821.1;Parent=gene-PYH62_03095;Dbxref=NCBI_GP:WHI79821.1;Name=WHI79821.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000178880.1;locus_tag=PYH62_03095;product=30S ribosomal protein S8;protein_id=WHI79821.1;transl_table=11 CP118825.1 Genbank gene 647163 647699 . + . ID=gene-PYH62_03100;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=PYH62_03100 CP118825.1 Protein Homology CDS 647163 647699 . + 0 ID=cds-WHI79822.1;Parent=gene-PYH62_03100;Dbxref=NCBI_GP:WHI79822.1;Name=WHI79822.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0022625;gbkey=CDS;gene=rplF;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829740.1;locus_tag=PYH62_03100;product=50S ribosomal protein L6;protein_id=WHI79822.1;transl_table=11 CP118825.1 Genbank gene 647731 648093 . + . ID=gene-PYH62_03105;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=PYH62_03105 CP118825.1 Protein Homology CDS 647731 648093 . + 0 ID=cds-WHI79823.1;Parent=gene-PYH62_03105;Dbxref=NCBI_GP:WHI79823.1;Name=WHI79823.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplR;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275136.1;locus_tag=PYH62_03105;product=50S ribosomal protein L18;protein_id=WHI79823.1;transl_table=11 CP118825.1 Genbank gene 648114 648614 . + . ID=gene-PYH62_03110;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=PYH62_03110 CP118825.1 Protein Homology CDS 648114 648614 . + 0 ID=cds-WHI79824.1;Parent=gene-PYH62_03110;Dbxref=NCBI_GP:WHI79824.1;Name=WHI79824.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsE;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426364.1;locus_tag=PYH62_03110;product=30S ribosomal protein S5;protein_id=WHI79824.1;transl_table=11 CP118825.1 Genbank gene 648631 648810 . + . ID=gene-PYH62_03115;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=PYH62_03115 CP118825.1 Protein Homology CDS 648631 648810 . + 0 ID=cds-WHI79825.1;Parent=gene-PYH62_03115;Dbxref=NCBI_GP:WHI79825.1;Name=WHI79825.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmD;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096577.1;locus_tag=PYH62_03115;product=50S ribosomal protein L30;protein_id=WHI79825.1;transl_table=11 CP118825.1 Genbank pseudogene 648830 649271 . + . ID=gene-PYH62_03120;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=pseudogene;locus_tag=PYH62_03120;pseudo=true CP118825.1 Protein Homology CDS 648830 649271 . + 0 ID=cds-PYH62_03120;Parent=gene-PYH62_03120;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplO;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500960.1;locus_tag=PYH62_03120;product=50S ribosomal protein L15;pseudo=true;transl_table=11 CP118825.1 Genbank gene 649271 650563 . + . ID=gene-PYH62_03125;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=PYH62_03125 CP118825.1 Protein Homology CDS 649271 650563 . + 0 ID=cds-WHI79826.1;Parent=gene-PYH62_03125;Dbxref=NCBI_GP:WHI79826.1;Name=WHI79826.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secY;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500959.1;locus_tag=PYH62_03125;product=preprotein translocase subunit SecY;protein_id=WHI79826.1;transl_table=11 CP118825.1 Genbank gene 650582 651232 . + . ID=gene-PYH62_03130;Name=PYH62_03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03130 CP118825.1 Protein Homology CDS 650582 651232 . + 0 ID=cds-WHI79827.1;Parent=gene-PYH62_03130;Dbxref=NCBI_GP:WHI79827.1;Name=WHI79827.1;Ontology_term=GO:0006139,GO:0005524,GO:0016776,GO:0019205;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,nucleobase-containing compound kinase activity|0019205||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448556.1;locus_tag=PYH62_03130;product=adenylate kinase;protein_id=WHI79827.1;transl_table=11 CP118825.1 Genbank gene 651432 651650 . + . ID=gene-PYH62_03135;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=PYH62_03135 CP118825.1 Protein Homology CDS 651432 651650 . + 0 ID=cds-WHI79828.1;Parent=gene-PYH62_03135;Dbxref=NCBI_GP:WHI79828.1;Name=WHI79828.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017185218.1;locus_tag=PYH62_03135;product=translation initiation factor IF-1;protein_id=WHI79828.1;transl_table=11 CP118825.1 Genbank gene 651682 651795 . + . ID=gene-PYH62_03140;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=PYH62_03140 CP118825.1 Protein Homology CDS 651682 651795 . + 0 ID=cds-WHI79829.1;Parent=gene-PYH62_03140;Dbxref=NCBI_GP:WHI79829.1;Name=WHI79829.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1;locus_tag=PYH62_03140;product=50S ribosomal protein L36;protein_id=WHI79829.1;transl_table=11 CP118825.1 Genbank gene 651818 652183 . + . ID=gene-PYH62_03145;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=PYH62_03145 CP118825.1 Protein Homology CDS 651818 652183 . + 0 ID=cds-WHI79830.1;Parent=gene-PYH62_03145;Dbxref=NCBI_GP:WHI79830.1;Name=WHI79830.1;Ontology_term=GO:0006412,GO:0003735,GO:0022627;gbkey=CDS;gene=rpsM;go_component=cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012748902.1;locus_tag=PYH62_03145;product=30S ribosomal protein S13;protein_id=WHI79830.1;transl_table=11 CP118825.1 Genbank gene 652207 652596 . + . ID=gene-PYH62_03150;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=PYH62_03150 CP118825.1 Protein Homology CDS 652207 652596 . + 0 ID=cds-WHI79831.1;Parent=gene-PYH62_03150;Dbxref=NCBI_GP:WHI79831.1;Name=WHI79831.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998822.1;locus_tag=PYH62_03150;product=30S ribosomal protein S11;protein_id=WHI79831.1;transl_table=11 CP118825.1 Genbank gene 652679 653623 . + . ID=gene-PYH62_03155;Name=PYH62_03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03155 CP118825.1 Protein Homology CDS 652679 653623 . + 0 ID=cds-WHI79832.1;Parent=gene-PYH62_03155;Dbxref=NCBI_GP:WHI79832.1;Name=WHI79832.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899,GO:0046983;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,protein dimerization activity|0046983||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302606.1;locus_tag=PYH62_03155;product=DNA-directed RNA polymerase subunit alpha;protein_id=WHI79832.1;transl_table=11 CP118825.1 Genbank gene 653645 654016 . + . ID=gene-PYH62_03160;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=PYH62_03160 CP118825.1 Protein Homology CDS 653645 654016 . + 0 ID=cds-WHI79833.1;Parent=gene-PYH62_03160;Dbxref=NCBI_GP:WHI79833.1;Name=WHI79833.1;Ontology_term=GO:0006412,GO:0003735,GO:0005762,GO:0022625;gbkey=CDS;gene=rplQ;go_component=mitochondrial large ribosomal subunit|0005762||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275144.1;locus_tag=PYH62_03160;product=50S ribosomal protein L17;protein_id=WHI79833.1;transl_table=11 CP118825.1 Genbank gene 654318 655130 . + . ID=gene-PYH62_03165;Name=PYH62_03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03165 CP118825.1 Protein Homology CDS 654318 655130 . + 0 ID=cds-WHI79834.1;Parent=gene-PYH62_03165;Dbxref=NCBI_GP:WHI79834.1;Name=WHI79834.1;Ontology_term=GO:0006810,GO:0005524,GO:0042626,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275145.1;locus_tag=PYH62_03165;product=energy-coupling factor transporter ATPase;protein_id=WHI79834.1;transl_table=11 CP118825.1 Genbank gene 655127 655990 . + . ID=gene-PYH62_03170;Name=PYH62_03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03170 CP118825.1 Protein Homology CDS 655127 655990 . + 0 ID=cds-WHI79835.1;Parent=gene-PYH62_03170;Dbxref=NCBI_GP:WHI79835.1;Name=WHI79835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275146.1;locus_tag=PYH62_03170;product=energy-coupling factor transporter ATPase;protein_id=WHI79835.1;transl_table=11 CP118825.1 Genbank gene 655980 656786 . + . ID=gene-PYH62_03175;Name=PYH62_03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03175 CP118825.1 Protein Homology CDS 655980 656786 . + 0 ID=cds-WHI79836.1;Parent=gene-PYH62_03175;Dbxref=NCBI_GP:WHI79836.1;Name=WHI79836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500949.1;locus_tag=PYH62_03175;product=energy-coupling factor transporter transmembrane protein EcfT;protein_id=WHI79836.1;transl_table=11 CP118825.1 Genbank gene 656791 657594 . + . ID=gene-PYH62_03180;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=PYH62_03180 CP118825.1 Protein Homology CDS 656791 657594 . + 0 ID=cds-WHI79837.1;Parent=gene-PYH62_03180;Dbxref=NCBI_GP:WHI79837.1;Name=WHI79837.1;Ontology_term=GO:0006400,GO:0009982;gbkey=CDS;gene=truA;go_function=pseudouridine synthase activity|0009982||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500948.1;locus_tag=PYH62_03180;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WHI79837.1;transl_table=11 CP118825.1 Genbank gene 657845 658282 . + . ID=gene-PYH62_03185;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=PYH62_03185 CP118825.1 Protein Homology CDS 657845 658282 . + 0 ID=cds-WHI79838.1;Parent=gene-PYH62_03185;Dbxref=NCBI_GP:WHI79838.1;Name=WHI79838.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplM;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468667.1;locus_tag=PYH62_03185;product=50S ribosomal protein L13;protein_id=WHI79838.1;transl_table=11 CP118825.1 Genbank gene 658302 658694 . + . ID=gene-PYH62_03190;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=PYH62_03190 CP118825.1 Protein Homology CDS 658302 658694 . + 0 ID=cds-WHI79839.1;Parent=gene-PYH62_03190;Dbxref=NCBI_GP:WHI79839.1;Name=WHI79839.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001790547.1;locus_tag=PYH62_03190;product=30S ribosomal protein S9;protein_id=WHI79839.1;transl_table=11 CP118825.1 Genbank gene 658855 659589 . - . ID=gene-PYH62_03195;Name=PYH62_03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03195 CP118825.1 Protein Homology CDS 658855 659589 . - 0 ID=cds-WHI79840.1;Parent=gene-PYH62_03195;Dbxref=NCBI_GP:WHI79840.1;Name=WHI79840.1;Ontology_term=GO:0034979,GO:0051287,GO:0070403;gbkey=CDS;go_function=NAD-dependent protein deacetylase activity|0034979||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835774.1;locus_tag=PYH62_03195;product=NAD-dependent protein deacylase;protein_id=WHI79840.1;transl_table=11 CP118825.1 Genbank gene 659795 660550 . + . ID=gene-PYH62_03200;Name=PYH62_03200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03200 CP118825.1 Protein Homology CDS 659795 660550 . + 0 ID=cds-WHI79841.1;Parent=gene-PYH62_03200;Dbxref=NCBI_GP:WHI79841.1;Name=WHI79841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835773.1;locus_tag=PYH62_03200;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WHI79841.1;transl_table=11 CP118825.1 Genbank gene 660783 661211 . + . ID=gene-PYH62_03205;Name=lacA;gbkey=Gene;gene=lacA;gene_biotype=protein_coding;locus_tag=PYH62_03205 CP118825.1 Protein Homology CDS 660783 661211 . + 0 ID=cds-WHI79842.1;Parent=gene-PYH62_03205;Dbxref=NCBI_GP:WHI79842.1;Name=WHI79842.1;Ontology_term=GO:0019512,GO:0050044;gbkey=CDS;gene=lacA;go_function=galactose-6-phosphate isomerase activity|0050044||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462559.1;locus_tag=PYH62_03205;product=galactose-6-phosphate isomerase subunit LacA;protein_id=WHI79842.1;transl_table=11 CP118825.1 Genbank gene 661227 661742 . + . ID=gene-PYH62_03210;Name=lacB;gbkey=Gene;gene=lacB;gene_biotype=protein_coding;locus_tag=PYH62_03210 CP118825.1 Protein Homology CDS 661227 661742 . + 0 ID=cds-WHI79843.1;Parent=gene-PYH62_03210;Dbxref=NCBI_GP:WHI79843.1;Name=WHI79843.1;Ontology_term=GO:0019512,GO:0050044;gbkey=CDS;gene=lacB;go_function=galactose-6-phosphate isomerase activity|0050044||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500921.1;locus_tag=PYH62_03210;product=galactose-6-phosphate isomerase subunit LacB;protein_id=WHI79843.1;transl_table=11 CP118825.1 Genbank gene 661755 662687 . + . ID=gene-PYH62_03215;Name=PYH62_03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03215 CP118825.1 Protein Homology CDS 661755 662687 . + 0 ID=cds-WHI79844.1;Parent=gene-PYH62_03215;Dbxref=NCBI_GP:WHI79844.1;Name=WHI79844.1;Ontology_term=GO:0019512,GO:0009024;gbkey=CDS;go_function=tagatose-6-phosphate kinase activity|0009024||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829786.1;locus_tag=PYH62_03215;product=tagatose-6-phosphate kinase;protein_id=WHI79844.1;transl_table=11 CP118825.1 Genbank pseudogene 662691 663669 . + . ID=gene-PYH62_03220;Name=lacD;gbkey=Gene;gene=lacD;gene_biotype=pseudogene;locus_tag=PYH62_03220;pseudo=true CP118825.1 Protein Homology CDS 662691 663669 . + 0 ID=cds-PYH62_03220;Parent=gene-PYH62_03220;Note=frameshifted;Ontology_term=GO:0019512,GO:0009025;gbkey=CDS;gene=lacD;go_function=tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=lactose catabolic process via tagatose-6-phosphate|0019512||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456993.1;locus_tag=PYH62_03220;product=tagatose-bisphosphate aldolase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 663689 664003 . + . ID=gene-PYH62_03225;Name=PYH62_03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03225 CP118825.1 Protein Homology CDS 663689 664003 . + 0 ID=cds-WHI79845.1;Parent=gene-PYH62_03225;Dbxref=NCBI_GP:WHI79845.1;Name=WHI79845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174827.1;locus_tag=PYH62_03225;product=PTS lactose/cellobiose transporter subunit IIA;protein_id=WHI79845.1;transl_table=11 CP118825.1 Genbank gene 664009 665760 . + . ID=gene-PYH62_03230;Name=PYH62_03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03230 CP118825.1 Protein Homology CDS 664009 665760 . + 0 ID=cds-WHI79846.1;Parent=gene-PYH62_03230;Dbxref=NCBI_GP:WHI79846.1;Name=WHI79846.1;Ontology_term=GO:0009401,GO:0015155,GO:0019197;gbkey=CDS;go_component=phosphoenolpyruvate-dependent sugar phosphotransferase complex|0019197||IEA;go_function=lactose transmembrane transporter activity|0015155||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275159.1;locus_tag=PYH62_03230;product=lactose-specific PTS transporter subunit EIIC;protein_id=WHI79846.1;transl_table=11 CP118825.1 Genbank pseudogene 665776 667189 . + . ID=gene-PYH62_03235;Name=lacG;gbkey=Gene;gene=lacG;gene_biotype=pseudogene;locus_tag=PYH62_03235;pseudo=true CP118825.1 Protein Homology CDS 665776 667189 . + 0 ID=cds-PYH62_03235;Parent=gene-PYH62_03235;Note=frameshifted;Ontology_term=GO:0006012,GO:0004565,GO:0009341;gbkey=CDS;gene=lacG;go_component=beta-galactosidase complex|0009341||IEA;go_function=beta-galactosidase activity|0004565||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500916.1;locus_tag=PYH62_03235;product=6-phospho-beta-galactosidase;pseudo=true;transl_table=11 CP118825.1 Genbank pseudogene 667760 668762 . - . ID=gene-PYH62_03240;Name=PYH62_03240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_03240;pseudo=true CP118825.1 Protein Homology CDS 667760 668762 . - 0 ID=cds-PYH62_03240;Parent=gene-PYH62_03240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175380.1;locus_tag=PYH62_03240;product=LLM class flavin-dependent oxidoreductase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 668902 669909 . + . ID=gene-PYH62_03245;Name=PYH62_03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03245 CP118825.1 Protein Homology CDS 668902 669909 . + 0 ID=cds-WHI79847.1;Parent=gene-PYH62_03245;Dbxref=NCBI_GP:WHI79847.1;Name=WHI79847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448412.1;locus_tag=PYH62_03245;product=NADP-dependent oxidoreductase;protein_id=WHI79847.1;transl_table=11 CP118825.1 Genbank gene 669942 670955 . + . ID=gene-PYH62_03250;Name=PYH62_03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03250 CP118825.1 Protein Homology CDS 669942 670955 . + 0 ID=cds-WHI79848.1;Parent=gene-PYH62_03250;Dbxref=NCBI_GP:WHI79848.1;Name=WHI79848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175378.1;locus_tag=PYH62_03250;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WHI79848.1;transl_table=11 CP118825.1 Genbank gene 671119 672681 . + . ID=gene-PYH62_03255;Name=PYH62_03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03255 CP118825.1 Protein Homology CDS 671119 672681 . + 0 ID=cds-WHI79849.1;Parent=gene-PYH62_03255;Dbxref=NCBI_GP:WHI79849.1;Name=WHI79849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175377.1;locus_tag=PYH62_03255;product=BCCT family transporter;protein_id=WHI79849.1;transl_table=11 CP118825.1 Genbank gene 672863 673399 . + . ID=gene-PYH62_03260;Name=amaP;gbkey=Gene;gene=amaP;gene_biotype=protein_coding;locus_tag=PYH62_03260 CP118825.1 Protein Homology CDS 672863 673399 . + 0 ID=cds-WHI79850.1;Parent=gene-PYH62_03260;Dbxref=NCBI_GP:WHI79850.1;Name=WHI79850.1;gbkey=CDS;gene=amaP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500911.1;locus_tag=PYH62_03260;product=alkaline shock response membrane anchor protein AmaP;protein_id=WHI79850.1;transl_table=11 CP118825.1 Genbank gene 673412 673648 . + . ID=gene-PYH62_03265;Name=PYH62_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03265 CP118825.1 Protein Homology CDS 673412 673648 . + 0 ID=cds-WHI79851.1;Parent=gene-PYH62_03265;Dbxref=NCBI_GP:WHI79851.1;Name=WHI79851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500910.1;locus_tag=PYH62_03265;product=DUF2273 domain-containing protein;protein_id=WHI79851.1;transl_table=11 CP118825.1 Genbank gene 673727 674275 . + . ID=gene-PYH62_03270;Name=PYH62_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03270 CP118825.1 Protein Homology CDS 673727 674275 . + 0 ID=cds-WHI79852.1;Parent=gene-PYH62_03270;Dbxref=NCBI_GP:WHI79852.1;Name=WHI79852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448598.1;locus_tag=PYH62_03270;product=Asp23/Gls24 family envelope stress response protein;protein_id=WHI79852.1;transl_table=11 CP118825.1 Genbank gene 674386 676329 . - . ID=gene-PYH62_03275;Name=PYH62_03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03275 CP118825.1 Protein Homology CDS 674386 676329 . - 0 ID=cds-WHI79853.1;Parent=gene-PYH62_03275;Dbxref=NCBI_GP:WHI79853.1;Name=WHI79853.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455026.1;locus_tag=PYH62_03275;product=IucA/IucC family protein;protein_id=WHI79853.1;transl_table=11 CP118825.1 Genbank gene 676543 678300 . + . ID=gene-PYH62_03280;Name=PYH62_03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03280 CP118825.1 Protein Homology CDS 676543 678300 . + 0 ID=cds-WHI79854.1;Parent=gene-PYH62_03280;Dbxref=NCBI_GP:WHI79854.1;Name=WHI79854.1;Ontology_term=GO:0019290;gbkey=CDS;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455027.1;locus_tag=PYH62_03280;product=IucA/IucC family protein;protein_id=WHI79854.1;transl_table=11 CP118825.1 Genbank gene 678301 679362 . + . ID=gene-PYH62_03285;Name=PYH62_03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03285 CP118825.1 Protein Homology CDS 678301 679362 . + 0 ID=cds-WHI79855.1;Parent=gene-PYH62_03285;Dbxref=NCBI_GP:WHI79855.1;Name=WHI79855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175374.1;locus_tag=PYH62_03285;product=alanine racemase;protein_id=WHI79855.1;transl_table=11 CP118825.1 Genbank gene 679560 680558 . + . ID=gene-PYH62_03290;Name=PYH62_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03290 CP118825.1 Protein Homology CDS 679560 680558 . + 0 ID=cds-WHI79856.1;Parent=gene-PYH62_03290;Dbxref=NCBI_GP:WHI79856.1;Name=WHI79856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488632.1;locus_tag=PYH62_03290;product=Fe(3+) dicitrate ABC transporter substrate-binding protein;protein_id=WHI79856.1;transl_table=11 CP118825.1 Genbank gene 680571 681602 . + . ID=gene-PYH62_03295;Name=PYH62_03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03295 CP118825.1 Protein Homology CDS 680571 681602 . + 0 ID=cds-WHI79857.1;Parent=gene-PYH62_03295;Dbxref=NCBI_GP:WHI79857.1;Name=WHI79857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832732.1;locus_tag=PYH62_03295;product=iron ABC transporter permease;protein_id=WHI79857.1;transl_table=11 CP118825.1 Genbank gene 681599 682564 . + . ID=gene-PYH62_03300;Name=PYH62_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03300 CP118825.1 Protein Homology CDS 681599 682564 . + 0 ID=cds-WHI79858.1;Parent=gene-PYH62_03300;Dbxref=NCBI_GP:WHI79858.1;Name=WHI79858.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448568.1;locus_tag=PYH62_03300;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WHI79858.1;transl_table=11 CP118825.1 Genbank gene 682796 684166 . + . ID=gene-PYH62_03305;Name=PYH62_03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03305 CP118825.1 Protein Homology CDS 682796 684166 . + 0 ID=cds-WHI79859.1;Parent=gene-PYH62_03305;Dbxref=NCBI_GP:WHI79859.1;Name=WHI79859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001670170.1;locus_tag=PYH62_03305;product=YjiH family protein;protein_id=WHI79859.1;transl_table=11 CP118825.1 Genbank gene 684224 684538 . - . ID=gene-PYH62_03310;Name=PYH62_03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03310 CP118825.1 Protein Homology CDS 684224 684538 . - 0 ID=cds-WHI79860.1;Parent=gene-PYH62_03310;Dbxref=NCBI_GP:WHI79860.1;Name=WHI79860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448399.1;locus_tag=PYH62_03310;product=heme oxygenase;protein_id=WHI79860.1;transl_table=11 CP118825.1 Genbank gene 684715 685233 . + . ID=gene-PYH62_03315;Name=PYH62_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03315 CP118825.1 Protein Homology CDS 684715 685233 . + 0 ID=cds-WHI79861.1;Parent=gene-PYH62_03315;Dbxref=NCBI_GP:WHI79861.1;Name=WHI79861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175369.1;locus_tag=PYH62_03315;product=metal-dependent hydrolase;protein_id=WHI79861.1;transl_table=11 CP118825.1 Genbank gene 685339 686526 . + . ID=gene-PYH62_03320;Name=PYH62_03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03320 CP118825.1 Protein Homology CDS 685339 686526 . + 0 ID=cds-WHI79862.1;Parent=gene-PYH62_03320;Dbxref=NCBI_GP:WHI79862.1;Name=WHI79862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275182.1;locus_tag=PYH62_03320;product=UDPGP type 1 family protein;protein_id=WHI79862.1;transl_table=11 CP118825.1 Genbank gene 686543 687226 . + . ID=gene-PYH62_03325;Name=PYH62_03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03325 CP118825.1 Protein Homology CDS 686543 687226 . + 0 ID=cds-WHI79863.1;Parent=gene-PYH62_03325;Dbxref=NCBI_GP:WHI79863.1;Name=WHI79863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500893.1;locus_tag=PYH62_03325;product=hemolysin III family protein;protein_id=WHI79863.1;transl_table=11 CP118825.1 Genbank pseudogene 687414 688755 . + . ID=gene-PYH62_03330;Name=sdrM;gbkey=Gene;gene=sdrM;gene_biotype=pseudogene;locus_tag=PYH62_03330;pseudo=true CP118825.1 Protein Homology CDS 687414 688755 . + 0 ID=cds-PYH62_03330;Parent=gene-PYH62_03330;Note=frameshifted;gbkey=CDS;gene=sdrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448601.1;locus_tag=PYH62_03330;product=multidrug efflux MFS transporter SdrM;pseudo=true;transl_table=11 CP118825.1 Genbank gene 688830 689297 . + . ID=gene-PYH62_03335;Name=PYH62_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03335 CP118825.1 Protein Homology CDS 688830 689297 . + 0 ID=cds-WHI79864.1;Parent=gene-PYH62_03335;Dbxref=NCBI_GP:WHI79864.1;Name=WHI79864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448546.1;locus_tag=PYH62_03335;product=SepA family multidrug efflux transporter;protein_id=WHI79864.1;transl_table=11 CP118825.1 Genbank gene 689389 690453 . + . ID=gene-PYH62_03340;Name=PYH62_03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03340 CP118825.1 Protein Homology CDS 689389 690453 . + 0 ID=cds-WHI79865.1;Parent=gene-PYH62_03340;Dbxref=NCBI_GP:WHI79865.1;Name=WHI79865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804887.1;locus_tag=PYH62_03340;product=Mrp/NBP35 family ATP-binding protein;protein_id=WHI79865.1;transl_table=11 CP118825.1 Genbank gene 690906 692456 . + . ID=gene-PYH62_03345;Name=PYH62_03345;gbkey=Gene;gene_biotype=rRNA;locus_tag=PYH62_03345 CP118825.1 cmsearch rRNA 690906 692456 . + . ID=rna-PYH62_03345;Parent=gene-PYH62_03345;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_03345;product=16S ribosomal RNA CP118825.1 cmsearch exon 690906 692456 . + . ID=exon-PYH62_03345-1;Parent=rna-PYH62_03345;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_03345;product=16S ribosomal RNA CP118825.1 Genbank gene 692757 695678 . + . ID=gene-PYH62_03350;Name=PYH62_03350;gbkey=Gene;gene_biotype=rRNA;locus_tag=PYH62_03350 CP118825.1 cmsearch rRNA 692757 695678 . + . ID=rna-PYH62_03350;Parent=gene-PYH62_03350;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_03350;product=23S ribosomal RNA CP118825.1 cmsearch exon 692757 695678 . + . ID=exon-PYH62_03350-1;Parent=rna-PYH62_03350;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_03350;product=23S ribosomal RNA CP118825.1 Genbank gene 695746 695860 . + . ID=gene-PYH62_03355;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PYH62_03355 CP118825.1 cmsearch rRNA 695746 695860 . + . ID=rna-PYH62_03355;Parent=gene-PYH62_03355;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_03355;product=5S ribosomal RNA CP118825.1 cmsearch exon 695746 695860 . + . ID=exon-PYH62_03355-1;Parent=rna-PYH62_03355;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_03355;product=5S ribosomal RNA CP118825.1 Genbank gene 695872 695946 . + . ID=gene-PYH62_03360;Name=PYH62_03360;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_03360 CP118825.1 tRNAscan-SE tRNA 695872 695946 . + . ID=rna-PYH62_03360;Parent=gene-PYH62_03360;anticodon=(pos:695904..695906);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_03360;product=tRNA-Asn CP118825.1 tRNAscan-SE exon 695872 695946 . + . ID=exon-PYH62_03360-1;Parent=rna-PYH62_03360;anticodon=(pos:695904..695906);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_03360;product=tRNA-Asn CP118825.1 Genbank gene 695948 696019 . + . ID=gene-PYH62_03365;Name=PYH62_03365;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_03365 CP118825.1 tRNAscan-SE tRNA 695948 696019 . + . ID=rna-PYH62_03365;Parent=gene-PYH62_03365;anticodon=(pos:695981..695983);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_03365;product=tRNA-Glu CP118825.1 tRNAscan-SE exon 695948 696019 . + . ID=exon-PYH62_03365-1;Parent=rna-PYH62_03365;anticodon=(pos:695981..695983);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_03365;product=tRNA-Glu CP118825.1 Genbank gene 696027 696103 . + . ID=gene-PYH62_03370;Name=PYH62_03370;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_03370 CP118825.1 tRNAscan-SE tRNA 696027 696103 . + . ID=rna-PYH62_03370;Parent=gene-PYH62_03370;anticodon=(pos:696061..696063);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_03370;product=tRNA-Val CP118825.1 tRNAscan-SE exon 696027 696103 . + . ID=exon-PYH62_03370-1;Parent=rna-PYH62_03370;anticodon=(pos:696061..696063);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_03370;product=tRNA-Val CP118825.1 Genbank gene 696114 696197 . + . ID=gene-PYH62_03375;Name=PYH62_03375;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_03375 CP118825.1 tRNAscan-SE tRNA 696114 696197 . + . ID=rna-PYH62_03375;Parent=gene-PYH62_03375;anticodon=(pos:696148..696150);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_03375;product=tRNA-Tyr CP118825.1 tRNAscan-SE exon 696114 696197 . + . ID=exon-PYH62_03375-1;Parent=rna-PYH62_03375;anticodon=(pos:696148..696150);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_03375;product=tRNA-Tyr CP118825.1 Genbank gene 696204 696278 . + . ID=gene-PYH62_03380;Name=PYH62_03380;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_03380 CP118825.1 tRNAscan-SE tRNA 696204 696278 . + . ID=rna-PYH62_03380;Parent=gene-PYH62_03380;anticodon=(pos:696236..696238);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_03380;product=tRNA-Gln CP118825.1 tRNAscan-SE exon 696204 696278 . + . ID=exon-PYH62_03380-1;Parent=rna-PYH62_03380;anticodon=(pos:696236..696238);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_03380;product=tRNA-Gln CP118825.1 Genbank gene 696282 696354 . + . ID=gene-PYH62_03385;Name=PYH62_03385;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_03385 CP118825.1 tRNAscan-SE tRNA 696282 696354 . + . ID=rna-PYH62_03385;Parent=gene-PYH62_03385;anticodon=(pos:696315..696317);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_03385;product=tRNA-Lys CP118825.1 tRNAscan-SE exon 696282 696354 . + . ID=exon-PYH62_03385-1;Parent=rna-PYH62_03385;anticodon=(pos:696315..696317);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_03385;product=tRNA-Lys CP118825.1 Genbank gene 696506 697312 . + . ID=gene-PYH62_03390;Name=cdaA;gbkey=Gene;gene=cdaA;gene_biotype=protein_coding;locus_tag=PYH62_03390 CP118825.1 Protein Homology CDS 696506 697312 . + 0 ID=cds-WHI79866.1;Parent=gene-PYH62_03390;Dbxref=NCBI_GP:WHI79866.1;Name=WHI79866.1;Ontology_term=GO:0004016;gbkey=CDS;gene=cdaA;go_function=adenylate cyclase activity|0004016||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500883.1;locus_tag=PYH62_03390;product=diadenylate cyclase CdaA;protein_id=WHI79866.1;transl_table=11 CP118825.1 Genbank gene 697314 698246 . + . ID=gene-PYH62_03395;Name=PYH62_03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03395 CP118825.1 Protein Homology CDS 697314 698246 . + 0 ID=cds-WHI79867.1;Parent=gene-PYH62_03395;Dbxref=NCBI_GP:WHI79867.1;Name=WHI79867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000894026.1;locus_tag=PYH62_03395;product=CdaR family protein;protein_id=WHI79867.1;transl_table=11 CP118825.1 Genbank pseudogene 698275 699628 . + . ID=gene-PYH62_03400;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=pseudogene;locus_tag=PYH62_03400;pseudo=true CP118825.1 Protein Homology CDS 698275 699628 . + 0 ID=cds-PYH62_03400;Parent=gene-PYH62_03400;Note=frameshifted;Ontology_term=GO:0009103,GO:0009252,GO:0008966;gbkey=CDS;gene=glmM;go_function=phosphoglucosamine mutase activity|0008966||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448705.1;locus_tag=PYH62_03400;product=phosphoglucosamine mutase;pseudo=true;transl_table=11 CP118825.1 Genbank pseudogene 700169 701975 . + . ID=gene-PYH62_03405;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=pseudogene;locus_tag=PYH62_03405;pseudo=true CP118825.1 Protein Homology CDS 700169 701975 . + 0 ID=cds-PYH62_03405;Parent=gene-PYH62_03405;Note=frameshifted;Ontology_term=GO:0006040,GO:0009252,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500875.1;locus_tag=PYH62_03405;product=glutamine--fructose-6-phosphate transaminase (isomerizing);pseudo=true;transl_table=11 CP118825.1 Genbank gene 701996 702856 . + . ID=gene-PYH62_03410;Name=PYH62_03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03410 CP118825.1 Protein Homology CDS 701996 702856 . + 0 ID=cds-WHI79868.1;Parent=gene-PYH62_03410;Dbxref=NCBI_GP:WHI79868.1;Name=WHI79868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448677.1;locus_tag=PYH62_03410;product=ABC transporter ATP-binding protein;protein_id=WHI79868.1;transl_table=11 CP118825.1 Genbank gene 702919 703779 . + . ID=gene-PYH62_03415;Name=PYH62_03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03415 CP118825.1 Protein Homology CDS 702919 703779 . + 0 ID=cds-WHI79869.1;Parent=gene-PYH62_03415;Dbxref=NCBI_GP:WHI79869.1;Name=WHI79869.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448643.1;locus_tag=PYH62_03415;product=Cof-type HAD-IIB family hydrolase;protein_id=WHI79869.1;transl_table=11 CP118825.1 Genbank gene 703923 704888 . - . ID=gene-PYH62_03420;Name=PYH62_03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03420 CP118825.1 GeneMarkS-2+ CDS 703923 704888 . - 0 ID=cds-WHI79870.1;Parent=gene-PYH62_03420;Dbxref=NCBI_GP:WHI79870.1;Name=WHI79870.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_03420;product=YtxH domain-containing protein;protein_id=WHI79870.1;transl_table=11 CP118825.1 Genbank gene 705017 705751 . + . ID=gene-PYH62_03425;Name=PYH62_03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03425 CP118825.1 Protein Homology CDS 705017 705751 . + 0 ID=cds-WHI79871.1;Parent=gene-PYH62_03425;Dbxref=NCBI_GP:WHI79871.1;Name=WHI79871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448650.1;locus_tag=PYH62_03425;product=metallophosphoesterase family protein;protein_id=WHI79871.1;transl_table=11 CP118825.1 Genbank pseudogene 705836 706790 . - . ID=gene-PYH62_03430;Name=czrB;gbkey=Gene;gene=czrB;gene_biotype=pseudogene;locus_tag=PYH62_03430;pseudo=true CP118825.1 Protein Homology CDS 705836 706790 . - 0 ID=cds-PYH62_03430;Parent=gene-PYH62_03430;Note=frameshifted;gbkey=CDS;gene=czrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176085.1;locus_tag=PYH62_03430;product=CDF family zinc efflux transporter CzrB;pseudo=true;transl_table=11 CP118825.1 Genbank pseudogene 706792 706920 . - . ID=gene-PYH62_03435;Name=PYH62_03435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_03435;pseudo=true CP118825.1 Protein Homology CDS 706792 706920 . - 0 ID=cds-PYH62_03435;Parent=gene-PYH62_03435;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176085.1;locus_tag=PYH62_03435;product=cation-efflux pump;pseudo=true;transl_table=11 CP118825.1 Genbank gene 706924 707250 . - . ID=gene-PYH62_03440;Name=PYH62_03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03440 CP118825.1 Protein Homology CDS 706924 707250 . - 0 ID=cds-WHI79872.1;Parent=gene-PYH62_03440;Dbxref=NCBI_GP:WHI79872.1;Name=WHI79872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448641.1;locus_tag=PYH62_03440;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WHI79872.1;transl_table=11 CP118825.1 Genbank gene 707406 708062 . + . ID=gene-PYH62_03445;Name=PYH62_03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03445 CP118825.1 Protein Homology CDS 707406 708062 . + 0 ID=cds-WHI79873.1;Parent=gene-PYH62_03445;Dbxref=NCBI_GP:WHI79873.1;Name=WHI79873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488150.1;locus_tag=PYH62_03445;product=SDR family oxidoreductase;protein_id=WHI79873.1;transl_table=11 CP118825.1 Genbank gene 708404 709336 . + . ID=gene-PYH62_03450;Name=PYH62_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03450 CP118825.1 Protein Homology CDS 708404 709336 . + 0 ID=cds-WHI79874.1;Parent=gene-PYH62_03450;Dbxref=NCBI_GP:WHI79874.1;Name=WHI79874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001620169.1;locus_tag=PYH62_03450;product=class I mannose-6-phosphate isomerase;protein_id=WHI79874.1;transl_table=11 CP118825.1 Genbank pseudogene 709735 711109 . + . ID=gene-PYH62_03455;Name=PYH62_03455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_03455;pseudo=true CP118825.1 Protein Homology CDS 709735 711109 . + 0 ID=cds-PYH62_03455;Parent=gene-PYH62_03455;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835531.1;locus_tag=PYH62_03455;product=EVE domain-containing protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 711260 711655 . + . ID=gene-PYH62_03460;Name=PYH62_03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03460 CP118825.1 Protein Homology CDS 711260 711655 . + 0 ID=cds-WHI79875.1;Parent=gene-PYH62_03460;Dbxref=NCBI_GP:WHI79875.1;Name=WHI79875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448659.1;locus_tag=PYH62_03460;product=DCC1-like thiol-disulfide oxidoreductase family protein;protein_id=WHI79875.1;transl_table=11 CP118825.1 Genbank gene 711866 712306 . + . ID=gene-PYH62_03465;Name=PYH62_03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03465 CP118825.1 Protein Homology CDS 711866 712306 . + 0 ID=cds-WHI79876.1;Parent=gene-PYH62_03465;Dbxref=NCBI_GP:WHI79876.1;Name=WHI79876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176090.1;locus_tag=PYH62_03465;product=DNA starvation/stationary phase protection protein;protein_id=WHI79876.1;transl_table=11 CP118825.1 Genbank gene 712391 713101 . - . ID=gene-PYH62_03470;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=PYH62_03470 CP118825.1 Protein Homology CDS 712391 713101 . - 0 ID=cds-WHI79877.1;Parent=gene-PYH62_03470;Dbxref=NCBI_GP:WHI79877.1;Name=WHI79877.1;Ontology_term=GO:0043096,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=purine nucleobase salvage|0043096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500857.1;locus_tag=PYH62_03470;product=purine-nucleoside phosphorylase;protein_id=WHI79877.1;transl_table=11 CP118825.1 Genbank gene 713248 713910 . + . ID=gene-PYH62_03475;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=PYH62_03475 CP118825.1 Protein Homology CDS 713248 713910 . + 0 ID=cds-WHI79878.1;Parent=gene-PYH62_03475;Dbxref=NCBI_GP:WHI79878.1;Name=WHI79878.1;Ontology_term=GO:0009264,GO:0004139;gbkey=CDS;gene=deoC;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498700.1;locus_tag=PYH62_03475;product=deoxyribose-phosphate aldolase;protein_id=WHI79878.1;transl_table=11 CP118825.1 Genbank gene 713972 715273 . + . ID=gene-PYH62_03480;Name=PYH62_03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03480 CP118825.1 Protein Homology CDS 713972 715273 . + 0 ID=cds-WHI80232.1;Parent=gene-PYH62_03480;Dbxref=NCBI_GP:WHI80232.1;Name=WHI80232.1;Ontology_term=GO:0006213,GO:0016154;gbkey=CDS;go_function=pyrimidine-nucleoside phosphorylase activity|0016154||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500854.1;locus_tag=PYH62_03480;product=pyrimidine-nucleoside phosphorylase;protein_id=WHI80232.1;transl_table=11 CP118825.1 Genbank gene 715285 716469 . + . ID=gene-PYH62_03485;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=PYH62_03485 CP118825.1 Protein Homology CDS 715285 716469 . + 0 ID=cds-WHI79879.1;Parent=gene-PYH62_03485;Dbxref=NCBI_GP:WHI79879.1;Name=WHI79879.1;Ontology_term=GO:0006139,GO:0008973;gbkey=CDS;gene=deoB;go_function=phosphopentomutase activity|0008973||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176094.1;locus_tag=PYH62_03485;product=phosphopentomutase;protein_id=WHI79879.1;transl_table=11 CP118825.1 Genbank gene 716472 716822 . + . ID=gene-PYH62_03490;Name=PYH62_03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03490 CP118825.1 Protein Homology CDS 716472 716822 . + 0 ID=cds-WHI79880.1;Parent=gene-PYH62_03490;Dbxref=NCBI_GP:WHI79880.1;Name=WHI79880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498854.1;locus_tag=PYH62_03490;product=hypothetical protein;protein_id=WHI79880.1;transl_table=11 CP118825.1 Genbank gene 716889 717359 . - . ID=gene-PYH62_03495;Name=PYH62_03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03495 CP118825.1 Protein Homology CDS 716889 717359 . - 0 ID=cds-WHI79881.1;Parent=gene-PYH62_03495;Dbxref=NCBI_GP:WHI79881.1;Name=WHI79881.1;Ontology_term=GO:0009372,GO:0005506,GO:0043768;gbkey=CDS;go_function=iron ion binding|0005506||IEA,S-ribosylhomocysteine lyase activity|0043768||IEA;go_process=quorum sensing|0009372||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500852.1;locus_tag=PYH62_03495;product=S-ribosylhomocysteine lyase;protein_id=WHI79881.1;transl_table=11 CP118825.1 Genbank gene 717619 718794 . + . ID=gene-PYH62_03500;Name=PYH62_03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03500 CP118825.1 Protein Homology CDS 717619 718794 . + 0 ID=cds-WHI79882.1;Parent=gene-PYH62_03500;Dbxref=NCBI_GP:WHI79882.1;Name=WHI79882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448654.1;locus_tag=PYH62_03500;product=M20 family metallopeptidase;protein_id=WHI79882.1;transl_table=11 CP118825.1 Genbank gene 718799 719995 . + . ID=gene-PYH62_03505;Name=PYH62_03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03505 CP118825.1 Protein Homology CDS 718799 719995 . + 0 ID=cds-WHI79883.1;Parent=gene-PYH62_03505;Dbxref=NCBI_GP:WHI79883.1;Name=WHI79883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448657.1;locus_tag=PYH62_03505;product=ATP-grasp domain-containing protein;protein_id=WHI79883.1;transl_table=11 CP118825.1 Genbank gene 720100 720765 . + . ID=gene-PYH62_03510;Name=PYH62_03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03510 CP118825.1 Protein Homology CDS 720100 720765 . + 0 ID=cds-WHI79884.1;Parent=gene-PYH62_03510;Dbxref=NCBI_GP:WHI79884.1;Name=WHI79884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447806.1;locus_tag=PYH62_03510;product=DUF2750 domain-containing protein;protein_id=WHI79884.1;transl_table=11 CP118825.1 Genbank gene 720835 721635 . - . ID=gene-PYH62_03515;Name=coaW;gbkey=Gene;gene=coaW;gene_biotype=protein_coding;locus_tag=PYH62_03515 CP118825.1 Protein Homology CDS 720835 721635 . - 0 ID=cds-WHI79885.1;Parent=gene-PYH62_03515;Dbxref=NCBI_GP:WHI79885.1;Name=WHI79885.1;Ontology_term=GO:0015937,GO:0004594,GO:0005524;gbkey=CDS;gene=coaW;go_function=pantothenate kinase activity|0004594||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275216.1;locus_tag=PYH62_03515;product=type II pantothenate kinase;protein_id=WHI79885.1;transl_table=11 CP118825.1 Genbank gene 721816 722676 . + . ID=gene-PYH62_03520;Name=PYH62_03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03520 CP118825.1 Protein Homology CDS 721816 722676 . + 0 ID=cds-WHI79886.1;Parent=gene-PYH62_03520;Dbxref=NCBI_GP:WHI79886.1;Name=WHI79886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018113817.1;locus_tag=PYH62_03520;product=GNAT family N-acetyltransferase;protein_id=WHI79886.1;transl_table=11 CP118825.1 Genbank gene 722786 723316 . + . ID=gene-PYH62_03525;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=PYH62_03525 CP118825.1 Protein Homology CDS 722786 723316 . + 0 ID=cds-WHI79887.1;Parent=gene-PYH62_03525;Dbxref=NCBI_GP:WHI79887.1;Name=WHI79887.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoE;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500845.1;locus_tag=PYH62_03525;product=DNA-directed RNA polymerase subunit delta;protein_id=WHI79887.1;transl_table=11 CP118825.1 Genbank pseudogene 723514 725122 . + . ID=gene-PYH62_03530;Name=PYH62_03530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_03530;pseudo=true CP118825.1 Protein Homology CDS 723514 725122 . + 0 ID=cds-PYH62_03530;Parent=gene-PYH62_03530;Note=frameshifted;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175116.1;locus_tag=PYH62_03530;product=CTP synthase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 725239 725760 . - . ID=gene-PYH62_03535;Name=PYH62_03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03535 CP118825.1 Protein Homology CDS 725239 725760 . - 0 ID=cds-WHI79888.1;Parent=gene-PYH62_03535;Dbxref=NCBI_GP:WHI79888.1;Name=WHI79888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470169.1;locus_tag=PYH62_03535;product=DUF2529 domain-containing protein;protein_id=WHI79888.1;transl_table=11 CP118825.1 Genbank gene 725922 726779 . + . ID=gene-PYH62_03540;Name=PYH62_03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03540 CP118825.1 Protein Homology CDS 725922 726779 . + 0 ID=cds-WHI79889.1;Parent=gene-PYH62_03540;Dbxref=NCBI_GP:WHI79889.1;Name=WHI79889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468309.1;locus_tag=PYH62_03540;product=fructose-bisphosphate aldolase;protein_id=WHI79889.1;transl_table=11 CP118825.1 Genbank gene 727172 728443 . + . ID=gene-PYH62_03545;Name=PYH62_03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03545 CP118825.1 Protein Homology CDS 727172 728443 . + 0 ID=cds-WHI79890.1;Parent=gene-PYH62_03545;Dbxref=NCBI_GP:WHI79890.1;Name=WHI79890.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500841.1;locus_tag=PYH62_03545;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WHI79890.1;transl_table=11 CP118825.1 Genbank gene 728531 728866 . + . ID=gene-PYH62_03550;Name=PYH62_03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03550 CP118825.1 Protein Homology CDS 728531 728866 . + 0 ID=cds-WHI79891.1;Parent=gene-PYH62_03550;Dbxref=NCBI_GP:WHI79891.1;Name=WHI79891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448699.1;locus_tag=PYH62_03550;product=helix-turn-helix domain-containing protein;protein_id=WHI79891.1;transl_table=11 CP118825.1 Genbank gene 728976 730403 . + . ID=gene-PYH62_03555;Name=PYH62_03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03555 CP118825.1 Protein Homology CDS 728976 730403 . + 0 ID=cds-WHI79892.1;Parent=gene-PYH62_03555;Dbxref=NCBI_GP:WHI79892.1;Name=WHI79892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500839.1;locus_tag=PYH62_03555;product=aldehyde dehydrogenase family protein;protein_id=WHI79892.1;transl_table=11 CP118825.1 Genbank gene 730643 731959 . + . ID=gene-PYH62_03560;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=PYH62_03560 CP118825.1 Protein Homology CDS 730643 731959 . + 0 ID=cds-WHI79893.1;Parent=gene-PYH62_03560;Dbxref=NCBI_GP:WHI79893.1;Name=WHI79893.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500838.1;locus_tag=PYH62_03560;product=transcription termination factor Rho;protein_id=WHI79893.1;transl_table=11 CP118825.1 Genbank gene 732075 732332 . + . ID=gene-PYH62_03565;Name=PYH62_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03565 CP118825.1 Protein Homology CDS 732075 732332 . + 0 ID=cds-WHI79894.1;Parent=gene-PYH62_03565;Dbxref=NCBI_GP:WHI79894.1;Name=WHI79894.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448672.1;locus_tag=PYH62_03565;product=type B 50S ribosomal protein L31;protein_id=WHI79894.1;transl_table=11 CP118825.1 Genbank gene 732507 733106 . + . ID=gene-PYH62_03570;Name=PYH62_03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03570 CP118825.1 Protein Homology CDS 732507 733106 . + 0 ID=cds-WHI79895.1;Parent=gene-PYH62_03570;Dbxref=NCBI_GP:WHI79895.1;Name=WHI79895.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500836.1;locus_tag=PYH62_03570;product=thymidine kinase;protein_id=WHI79895.1;transl_table=11 CP118825.1 Genbank gene 733106 734182 . + . ID=gene-PYH62_03575;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=PYH62_03575 CP118825.1 Protein Homology CDS 733106 734182 . + 0 ID=cds-WHI79896.1;Parent=gene-PYH62_03575;Dbxref=NCBI_GP:WHI79896.1;Name=WHI79896.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015445905.1;locus_tag=PYH62_03575;product=peptide chain release factor 1;protein_id=WHI79896.1;transl_table=11 CP118825.1 Genbank gene 734169 735005 . + . ID=gene-PYH62_03580;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=PYH62_03580 CP118825.1 Protein Homology CDS 734169 735005 . + 0 ID=cds-WHI79897.1;Parent=gene-PYH62_03580;Dbxref=NCBI_GP:WHI79897.1;Name=WHI79897.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000248725.1;locus_tag=PYH62_03580;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WHI79897.1;transl_table=11 CP118825.1 Genbank gene 735090 736130 . + . ID=gene-PYH62_03585;Name=PYH62_03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03585 CP118825.1 Protein Homology CDS 735090 736130 . + 0 ID=cds-WHI79898.1;Parent=gene-PYH62_03585;Dbxref=NCBI_GP:WHI79898.1;Name=WHI79898.1;Ontology_term=GO:0006400,GO:0061710;gbkey=CDS;go_function=L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175124.1;locus_tag=PYH62_03585;product=L-threonylcarbamoyladenylate synthase;protein_id=WHI79898.1;transl_table=11 CP118825.1 Genbank gene 736127 736543 . + . ID=gene-PYH62_03590;Name=PYH62_03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03590 CP118825.1 Protein Homology CDS 736127 736543 . + 0 ID=cds-WHI79899.1;Parent=gene-PYH62_03590;Dbxref=NCBI_GP:WHI79899.1;Name=WHI79899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175125.1;locus_tag=PYH62_03590;product=low molecular weight protein arginine phosphatase;protein_id=WHI79899.1;transl_table=11 CP118825.1 Genbank gene 736653 737177 . + . ID=gene-PYH62_03595;Name=PYH62_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03595 CP118825.1 Protein Homology CDS 736653 737177 . + 0 ID=cds-WHI79900.1;Parent=gene-PYH62_03595;Dbxref=NCBI_GP:WHI79900.1;Name=WHI79900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500831.1;locus_tag=PYH62_03595;product=TIGR01440 family protein;protein_id=WHI79900.1;transl_table=11 CP118825.1 Genbank gene 737202 738440 . + . ID=gene-PYH62_03600;Name=PYH62_03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03600 CP118825.1 Protein Homology CDS 737202 738440 . + 0 ID=cds-WHI79901.1;Parent=gene-PYH62_03600;Dbxref=NCBI_GP:WHI79901.1;Name=WHI79901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500830.1;locus_tag=PYH62_03600;product=serine hydroxymethyltransferase;protein_id=WHI79901.1;transl_table=11 CP118825.1 Genbank gene 738465 739094 . + . ID=gene-PYH62_03605;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=PYH62_03605 CP118825.1 Protein Homology CDS 738465 739094 . + 0 ID=cds-WHI79902.1;Parent=gene-PYH62_03605;Dbxref=NCBI_GP:WHI79902.1;Name=WHI79902.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636774.1;locus_tag=PYH62_03605;product=uracil phosphoribosyltransferase;protein_id=WHI79902.1;transl_table=11 CP118825.1 Genbank gene 739114 740259 . + . ID=gene-PYH62_03610;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=PYH62_03610 CP118825.1 Protein Homology CDS 739114 740259 . + 0 ID=cds-WHI79903.1;Parent=gene-PYH62_03610;Dbxref=NCBI_GP:WHI79903.1;Name=WHI79903.1;Ontology_term=GO:0009103,GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835611.1;locus_tag=PYH62_03610;product=UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing);protein_id=WHI79903.1;transl_table=11 CP118825.1 Genbank gene 740407 740754 . + . ID=gene-PYH62_03615;Name=PYH62_03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03615 CP118825.1 Protein Homology CDS 740407 740754 . + 0 ID=cds-WHI79904.1;Parent=gene-PYH62_03615;Dbxref=NCBI_GP:WHI79904.1;Name=WHI79904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455060.1;locus_tag=PYH62_03615;product=ATP synthase subunit I;protein_id=WHI79904.1;transl_table=11 CP118825.1 Genbank gene 740783 741508 . + . ID=gene-PYH62_03620;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=PYH62_03620 CP118825.1 Protein Homology CDS 740783 741508 . + 0 ID=cds-WHI79905.1;Parent=gene-PYH62_03620;Dbxref=NCBI_GP:WHI79905.1;Name=WHI79905.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpB;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500826.1;locus_tag=PYH62_03620;product=F0F1 ATP synthase subunit A;protein_id=WHI79905.1;transl_table=11 CP118825.1 Genbank gene 741541 741753 . + . ID=gene-PYH62_03625;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=PYH62_03625 CP118825.1 Protein Homology CDS 741541 741753 . + 0 ID=cds-WHI79906.1;Parent=gene-PYH62_03625;Dbxref=NCBI_GP:WHI79906.1;Name=WHI79906.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275238.1;locus_tag=PYH62_03625;product=F0F1 ATP synthase subunit C;protein_id=WHI79906.1;transl_table=11 CP118825.1 Genbank gene 741840 742370 . + . ID=gene-PYH62_03630;Name=PYH62_03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03630 CP118825.1 Protein Homology CDS 741840 742370 . + 0 ID=cds-WHI79907.1;Parent=gene-PYH62_03630;Dbxref=NCBI_GP:WHI79907.1;Name=WHI79907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275239.1;locus_tag=PYH62_03630;product=F0F1 ATP synthase subunit B;protein_id=WHI79907.1;transl_table=11 CP118825.1 Genbank gene 742370 742909 . + . ID=gene-PYH62_03635;Name=PYH62_03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03635 CP118825.1 Protein Homology CDS 742370 742909 . + 0 ID=cds-WHI79908.1;Parent=gene-PYH62_03635;Dbxref=NCBI_GP:WHI79908.1;Name=WHI79908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275240.1;locus_tag=PYH62_03635;product=F0F1 ATP synthase subunit delta;protein_id=WHI79908.1;transl_table=11 CP118825.1 Genbank pseudogene 742928 744437 . + . ID=gene-PYH62_03640;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=pseudogene;locus_tag=PYH62_03640;pseudo=true CP118825.1 Protein Homology CDS 742928 744437 . + 0 ID=cds-PYH62_03640;Parent=gene-PYH62_03640;Note=frameshifted;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500822.1;locus_tag=PYH62_03640;product=F0F1 ATP synthase subunit alpha;pseudo=true;transl_table=11 CP118825.1 Genbank gene 744469 745335 . + . ID=gene-PYH62_03645;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=PYH62_03645 CP118825.1 Protein Homology CDS 744469 745335 . + 0 ID=cds-WHI79909.1;Parent=gene-PYH62_03645;Dbxref=NCBI_GP:WHI79909.1;Name=WHI79909.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpG;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500821.2;locus_tag=PYH62_03645;product=ATP synthase F1 subunit gamma;protein_id=WHI79909.1;transl_table=11 CP118825.1 Genbank gene 745357 746769 . + . ID=gene-PYH62_03650;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=PYH62_03650 CP118825.1 Protein Homology CDS 745357 746769 . + 0 ID=cds-WHI79910.1;Parent=gene-PYH62_03650;Dbxref=NCBI_GP:WHI79910.1;Name=WHI79910.1;Ontology_term=GO:0015986,GO:0046933,GO:0000275,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=mitochondrial proton-transporting ATP synthase complex%2C catalytic sector F(1)|0000275||IEA,proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636767.1;locus_tag=PYH62_03650;product=F0F1 ATP synthase subunit beta;protein_id=WHI79910.1;transl_table=11 CP118825.1 Genbank gene 746791 747192 . + . ID=gene-PYH62_03655;Name=PYH62_03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03655 CP118825.1 Protein Homology CDS 746791 747192 . + 0 ID=cds-WHI79911.1;Parent=gene-PYH62_03655;Dbxref=NCBI_GP:WHI79911.1;Name=WHI79911.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500819.1;locus_tag=PYH62_03655;product=F0F1 ATP synthase subunit epsilon;protein_id=WHI79911.1;transl_table=11 CP118825.1 Genbank gene 747506 747736 . + . ID=gene-PYH62_03660;Name=PYH62_03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03660 CP118825.1 Protein Homology CDS 747506 747736 . + 0 ID=cds-WHI79912.1;Parent=gene-PYH62_03660;Dbxref=NCBI_GP:WHI79912.1;Name=WHI79912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448711.1;locus_tag=PYH62_03660;product=DUF1146 family protein;protein_id=WHI79912.1;transl_table=11 CP118825.1 Genbank gene 747844 749109 . + . ID=gene-PYH62_03665;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=PYH62_03665 CP118825.1 Protein Homology CDS 747844 749109 . + 0 ID=cds-WHI79913.1;Parent=gene-PYH62_03665;Dbxref=NCBI_GP:WHI79913.1;Name=WHI79913.1;Ontology_term=GO:0009252,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500816.1;locus_tag=PYH62_03665;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WHI79913.1;transl_table=11 CP118825.1 Genbank gene 749137 749574 . + . ID=gene-PYH62_03670;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=PYH62_03670 CP118825.1 Protein Homology CDS 749137 749574 . + 0 ID=cds-WHI79914.1;Parent=gene-PYH62_03670;Dbxref=NCBI_GP:WHI79914.1;Name=WHI79914.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829953.1;locus_tag=PYH62_03670;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WHI79914.1;transl_table=11 CP118825.1 Genbank gene 749624 750064 . - . ID=gene-PYH62_03675;Name=PYH62_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03675 CP118825.1 Protein Homology CDS 749624 750064 . - 0 ID=cds-WHI79915.1;Parent=gene-PYH62_03675;Dbxref=NCBI_GP:WHI79915.1;Name=WHI79915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451648.1;locus_tag=PYH62_03675;product=YwpF-like family protein;protein_id=WHI79915.1;transl_table=11 CP118825.1 Genbank gene 750258 750653 . + . ID=gene-PYH62_03680;Name=PYH62_03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03680 CP118825.1 Protein Homology CDS 750258 750653 . + 0 ID=cds-WHI79916.1;Parent=gene-PYH62_03680;Dbxref=NCBI_GP:WHI79916.1;Name=WHI79916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448700.1;locus_tag=PYH62_03680;product=single-stranded DNA-binding protein;protein_id=WHI79916.1;transl_table=11 CP118825.1 Genbank gene 751057 751803 . + . ID=gene-PYH62_03685;Name=PYH62_03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03685 CP118825.1 Protein Homology CDS 751057 751803 . + 0 ID=cds-WHI79917.1;Parent=gene-PYH62_03685;Dbxref=NCBI_GP:WHI79917.1;Name=WHI79917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275250.1;locus_tag=PYH62_03685;product=transglycosylase family protein;protein_id=WHI79917.1;transl_table=11 CP118825.1 cmsearch riboswitch 752016 752118 . + . ID=id-CP118825.1:752016..752118;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch CP118825.1 Genbank gene 752195 752884 . + . ID=gene-PYH62_03690;Name=tenA;gbkey=Gene;gene=tenA;gene_biotype=protein_coding;locus_tag=PYH62_03690 CP118825.1 Protein Homology CDS 752195 752884 . + 0 ID=cds-WHI79918.1;Parent=gene-PYH62_03690;Dbxref=NCBI_GP:WHI79918.1;Name=WHI79918.1;Ontology_term=GO:0006772,GO:0050334;gbkey=CDS;gene=tenA;go_function=thiaminase activity|0050334||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477702.1;locus_tag=PYH62_03690;product=thiaminase II;protein_id=WHI79918.1;transl_table=11 CP118825.1 Genbank gene 752877 753698 . + . ID=gene-PYH62_03695;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=PYH62_03695 CP118825.1 Protein Homology CDS 752877 753698 . + 0 ID=cds-WHI79919.1;Parent=gene-PYH62_03695;Dbxref=NCBI_GP:WHI79919.1;Name=WHI79919.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832736.1;locus_tag=PYH62_03695;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WHI79919.1;transl_table=11 CP118825.1 Genbank pseudogene 753691 754480 . + . ID=gene-PYH62_03700;Name=thiM;gbkey=Gene;gene=thiM;gene_biotype=pseudogene;locus_tag=PYH62_03700;pseudo=true CP118825.1 Protein Homology CDS 753691 754480 . + 0 ID=cds-PYH62_03700;Parent=gene-PYH62_03700;Note=frameshifted;Ontology_term=GO:0009228,GO:0004417;gbkey=CDS;gene=thiM;go_function=hydroxyethylthiazole kinase activity|0004417||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501588.1;locus_tag=PYH62_03700;product=hydroxyethylthiazole kinase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 754483 755121 . + . ID=gene-PYH62_03705;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=PYH62_03705 CP118825.1 Protein Homology CDS 754483 755121 . + 0 ID=cds-WHI79920.1;Parent=gene-PYH62_03705;Dbxref=NCBI_GP:WHI79920.1;Name=WHI79920.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275254.1;locus_tag=PYH62_03705;product=thiamine phosphate synthase;protein_id=WHI79920.1;transl_table=11 CP118825.1 Genbank gene 755210 756079 . + . ID=gene-PYH62_03710;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=PYH62_03710 CP118825.1 Protein Homology CDS 755210 756079 . + 0 ID=cds-WHI79921.1;Parent=gene-PYH62_03710;Dbxref=NCBI_GP:WHI79921.1;Name=WHI79921.1;Ontology_term=GO:0051205,GO:0003674,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=molecular_function|0003674||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275255.1;locus_tag=PYH62_03710;product=membrane protein insertase YidC;protein_id=WHI79921.1;transl_table=11 CP118825.1 Genbank gene 756137 756784 . - . ID=gene-PYH62_03715;Name=PYH62_03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03715 CP118825.1 Protein Homology CDS 756137 756784 . - 0 ID=cds-WHI79922.1;Parent=gene-PYH62_03715;Dbxref=NCBI_GP:WHI79922.1;Name=WHI79922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174786.1;locus_tag=PYH62_03715;product=HD domain-containing protein;protein_id=WHI79922.1;transl_table=11 CP118825.1 Genbank gene 756819 758303 . - . ID=gene-PYH62_03720;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=PYH62_03720 CP118825.1 Protein Homology CDS 756819 758303 . - 0 ID=cds-WHI79923.1;Parent=gene-PYH62_03720;Dbxref=NCBI_GP:WHI79923.1;Name=WHI79923.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500802.1;locus_tag=PYH62_03720;product=cardiolipin synthase;protein_id=WHI79923.1;transl_table=11 CP118825.1 Genbank gene 758466 758759 . + . ID=gene-PYH62_03725;Name=csoR;gbkey=Gene;gene=csoR;gene_biotype=protein_coding;locus_tag=PYH62_03725 CP118825.1 Protein Homology CDS 758466 758759 . + 0 ID=cds-WHI79924.1;Parent=gene-PYH62_03725;Dbxref=NCBI_GP:WHI79924.1;Name=WHI79924.1;gbkey=CDS;gene=csoR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500801.1;locus_tag=PYH62_03725;product=copper-sensing transcriptional repressor CsoR;protein_id=WHI79924.1;transl_table=11 CP118825.1 Genbank gene 758775 758984 . + . ID=gene-PYH62_03730;Name=PYH62_03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03730 CP118825.1 Protein Homology CDS 758775 758984 . + 0 ID=cds-WHI79925.1;Parent=gene-PYH62_03730;Dbxref=NCBI_GP:WHI79925.1;Name=WHI79925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448674.1;locus_tag=PYH62_03730;product=heavy metal-associated domain-containing protein;protein_id=WHI79925.1;transl_table=11 CP118825.1 Genbank gene 759097 759234 . + . ID=gene-PYH62_03735;Name=PYH62_03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03735 CP118825.1 Protein Homology CDS 759097 759234 . + 0 ID=cds-WHI79926.1;Parent=gene-PYH62_03735;Dbxref=NCBI_GP:WHI79926.1;Name=WHI79926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000828354.1;locus_tag=PYH62_03735;product=Lmo0850 family protein;protein_id=WHI79926.1;transl_table=11 CP118825.1 Genbank gene 759395 760579 . - . ID=gene-PYH62_03740;Name=PYH62_03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03740 CP118825.1 Protein Homology CDS 759395 760579 . - 0 ID=cds-WHI79927.1;Parent=gene-PYH62_03740;Dbxref=NCBI_GP:WHI79927.1;Name=WHI79927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174789.1;locus_tag=PYH62_03740;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WHI79927.1;transl_table=11 CP118825.1 Genbank gene 760955 762025 . + . ID=gene-PYH62_03745;Name=PYH62_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03745 CP118825.1 Protein Homology CDS 760955 762025 . + 0 ID=cds-WHI79928.1;Parent=gene-PYH62_03745;Dbxref=NCBI_GP:WHI79928.1;Name=WHI79928.1;Ontology_term=GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500797.1;locus_tag=PYH62_03745;product=D-alanine--D-alanine ligase;protein_id=WHI79928.1;transl_table=11 CP118825.1 Genbank pseudogene 762041 763397 . + . ID=gene-PYH62_03750;Name=PYH62_03750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_03750;pseudo=true CP118825.1 Protein Homology CDS 762041 763397 . + 0 ID=cds-PYH62_03750;Parent=gene-PYH62_03750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448671.1;locus_tag=PYH62_03750;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 763629 765140 . + . ID=gene-PYH62_03755;Name=PYH62_03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03755 CP118825.1 Protein Homology CDS 763629 765140 . + 0 ID=cds-WHI79929.1;Parent=gene-PYH62_03755;Dbxref=NCBI_GP:WHI79929.1;Name=WHI79929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500795.1;locus_tag=PYH62_03755;product=DEAD/DEAH box helicase;protein_id=WHI79929.1;transl_table=11 CP118825.1 Genbank gene 765388 765867 . + . ID=gene-PYH62_03760;Name=PYH62_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03760 CP118825.1 Protein Homology CDS 765388 765867 . + 0 ID=cds-WHI79930.1;Parent=gene-PYH62_03760;Dbxref=NCBI_GP:WHI79930.1;Name=WHI79930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448666.1;locus_tag=PYH62_03760;product=PH domain-containing protein;protein_id=WHI79930.1;transl_table=11 CP118825.1 Genbank gene 765857 767359 . + . ID=gene-PYH62_03765;Name=PYH62_03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03765 CP118825.1 Protein Homology CDS 765857 767359 . + 0 ID=cds-WHI80233.1;Parent=gene-PYH62_03765;Dbxref=NCBI_GP:WHI80233.1;Name=WHI80233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448703.1;locus_tag=PYH62_03765;product=PH domain-containing protein;protein_id=WHI80233.1;transl_table=11 CP118825.1 Genbank gene 767352 767828 . + . ID=gene-PYH62_03770;Name=PYH62_03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03770 CP118825.1 Protein Homology CDS 767352 767828 . + 0 ID=cds-WHI79931.1;Parent=gene-PYH62_03770;Dbxref=NCBI_GP:WHI79931.1;Name=WHI79931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448662.1;locus_tag=PYH62_03770;product=PH domain-containing protein;protein_id=WHI79931.1;transl_table=11 CP118825.1 Genbank gene 767856 768209 . + . ID=gene-PYH62_03775;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=PYH62_03775 CP118825.1 Protein Homology CDS 767856 768209 . + 0 ID=cds-WHI79932.1;Parent=gene-PYH62_03775;Dbxref=NCBI_GP:WHI79932.1;Name=WHI79932.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174796.1;locus_tag=PYH62_03775;product=holo-ACP synthase;protein_id=WHI79932.1;transl_table=11 CP118825.1 Genbank pseudogene 768252 769398 . + . ID=gene-PYH62_03780;Name=alr;gbkey=Gene;gene=alr;gene_biotype=pseudogene;locus_tag=PYH62_03780;pseudo=true CP118825.1 Protein Homology CDS 768252 769398 . + 0 ID=cds-PYH62_03780;Parent=gene-PYH62_03780;Note=frameshifted;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835622.1;locus_tag=PYH62_03780;product=alanine racemase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 769484 769654 . + . ID=gene-PYH62_03785;Name=mazE;gbkey=Gene;gene=mazE;gene_biotype=protein_coding;locus_tag=PYH62_03785 CP118825.1 Protein Homology CDS 769484 769654 . + 0 ID=cds-WHI79933.1;Parent=gene-PYH62_03785;Dbxref=NCBI_GP:WHI79933.1;Name=WHI79933.1;gbkey=CDS;gene=mazE;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500783.1;locus_tag=PYH62_03785;product=type II toxin-antitoxin system antitoxin MazE;protein_id=WHI79933.1;transl_table=11 CP118825.1 Genbank gene 769651 770013 . + . ID=gene-PYH62_03790;Name=PYH62_03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03790 CP118825.1 Protein Homology CDS 769651 770013 . + 0 ID=cds-WHI79934.1;Parent=gene-PYH62_03790;Dbxref=NCBI_GP:WHI79934.1;Name=WHI79934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500782.1;locus_tag=PYH62_03790;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WHI79934.1;transl_table=11 CP118825.1 Genbank gene 770385 771386 . + . ID=gene-PYH62_03795;Name=PYH62_03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03795 CP118825.1 Protein Homology CDS 770385 771386 . + 0 ID=cds-WHI79935.1;Parent=gene-PYH62_03795;Dbxref=NCBI_GP:WHI79935.1;Name=WHI79935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000390648.1;locus_tag=PYH62_03795;product=PP2C family protein-serine/threonine phosphatase;protein_id=WHI79935.1;transl_table=11 CP118825.1 Genbank gene 771472 771798 . + . ID=gene-PYH62_03800;Name=PYH62_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03800 CP118825.1 Protein Homology CDS 771472 771798 . + 0 ID=cds-WHI79936.1;Parent=gene-PYH62_03800;Dbxref=NCBI_GP:WHI79936.1;Name=WHI79936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468012.1;locus_tag=PYH62_03800;product=anti-sigma factor antagonist;protein_id=WHI79936.1;transl_table=11 CP118825.1 Genbank gene 771827 772279 . + . ID=gene-PYH62_03805;Name=rsbW;gbkey=Gene;gene=rsbW;gene_biotype=protein_coding;locus_tag=PYH62_03805 CP118825.1 Protein Homology CDS 771827 772279 . + 0 ID=cds-WHI80234.1;Parent=gene-PYH62_03805;Dbxref=NCBI_GP:WHI80234.1;Name=WHI80234.1;gbkey=CDS;gene=rsbW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474646.1;locus_tag=PYH62_03805;product=anti-sigma B factor RsbW;protein_id=WHI80234.1;transl_table=11 CP118825.1 Genbank gene 772254 773024 . + . ID=gene-PYH62_03810;Name=sigB;gbkey=Gene;gene=sigB;gene_biotype=protein_coding;locus_tag=PYH62_03810 CP118825.1 Protein Homology CDS 772254 773024 . + 0 ID=cds-WHI79937.1;Parent=gene-PYH62_03810;Dbxref=NCBI_GP:WHI79937.1;Name=WHI79937.1;Ontology_term=GO:0006352,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=sigB;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500776.1;locus_tag=PYH62_03810;product=RNA polymerase sigma factor SigB;protein_id=WHI79937.1;transl_table=11 CP118825.1 Genbank gene 773150 775297 . + . ID=gene-PYH62_03815;Name=PYH62_03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03815 CP118825.1 Protein Homology CDS 773150 775297 . + 0 ID=cds-WHI79938.1;Parent=gene-PYH62_03815;Dbxref=NCBI_GP:WHI79938.1;Name=WHI79938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500775.1;locus_tag=PYH62_03815;product=Tex family protein;protein_id=WHI79938.1;transl_table=11 CP118825.1 Genbank gene 775290 775742 . + . ID=gene-PYH62_03820;Name=PYH62_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03820 CP118825.1 Protein Homology CDS 775290 775742 . + 0 ID=cds-WHI79939.1;Parent=gene-PYH62_03820;Dbxref=NCBI_GP:WHI79939.1;Name=WHI79939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448644.1;locus_tag=PYH62_03820;product=SprT family protein;protein_id=WHI79939.1;transl_table=11 CP118825.1 Genbank gene 776013 776098 . + . ID=gene-PYH62_03825;Name=PYH62_03825;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_03825 CP118825.1 tRNAscan-SE tRNA 776013 776098 . + . ID=rna-PYH62_03825;Parent=gene-PYH62_03825;anticodon=(pos:776046..776048);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_03825;product=tRNA-Leu CP118825.1 tRNAscan-SE exon 776013 776098 . + . ID=exon-PYH62_03825-1;Parent=rna-PYH62_03825;anticodon=(pos:776046..776048);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_03825;product=tRNA-Leu CP118825.1 Genbank gene 776123 776196 . + . ID=gene-PYH62_03830;Name=PYH62_03830;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_03830 CP118825.1 tRNAscan-SE tRNA 776123 776196 . + . ID=rna-PYH62_03830;Parent=gene-PYH62_03830;anticodon=(pos:776155..776157);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_03830;product=tRNA-Gly CP118825.1 tRNAscan-SE exon 776123 776196 . + . ID=exon-PYH62_03830-1;Parent=rna-PYH62_03830;anticodon=(pos:776155..776157);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_03830;product=tRNA-Gly CP118825.1 Genbank gene 776317 777867 . + . ID=gene-PYH62_03835;Name=PYH62_03835;gbkey=Gene;gene_biotype=rRNA;locus_tag=PYH62_03835 CP118825.1 cmsearch rRNA 776317 777867 . + . ID=rna-PYH62_03835;Parent=gene-PYH62_03835;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_03835;product=16S ribosomal RNA CP118825.1 cmsearch exon 776317 777867 . + . ID=exon-PYH62_03835-1;Parent=rna-PYH62_03835;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_03835;product=16S ribosomal RNA CP118825.1 Genbank gene 778168 781089 . + . ID=gene-PYH62_03840;Name=PYH62_03840;gbkey=Gene;gene_biotype=rRNA;locus_tag=PYH62_03840 CP118825.1 cmsearch rRNA 778168 781089 . + . ID=rna-PYH62_03840;Parent=gene-PYH62_03840;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_03840;product=23S ribosomal RNA CP118825.1 cmsearch exon 778168 781089 . + . ID=exon-PYH62_03840-1;Parent=rna-PYH62_03840;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_03840;product=23S ribosomal RNA CP118825.1 Genbank gene 781157 781271 . + . ID=gene-PYH62_03845;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PYH62_03845 CP118825.1 cmsearch rRNA 781157 781271 . + . ID=rna-PYH62_03845;Parent=gene-PYH62_03845;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_03845;product=5S ribosomal RNA CP118825.1 cmsearch exon 781157 781271 . + . ID=exon-PYH62_03845-1;Parent=rna-PYH62_03845;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_03845;product=5S ribosomal RNA CP118825.1 Genbank gene 781440 782708 . - . ID=gene-PYH62_03850;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=PYH62_03850 CP118825.1 Protein Homology CDS 781440 782708 . - 0 ID=cds-WHI79940.1;Parent=gene-PYH62_03850;Dbxref=NCBI_GP:WHI79940.1;Name=WHI79940.1;Ontology_term=GO:0006520,GO:0004794;gbkey=CDS;gene=ilvA;go_function=L-threonine ammonia-lyase activity|0004794||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500771.1;locus_tag=PYH62_03850;product=threonine ammonia-lyase IlvA;protein_id=WHI79940.1;transl_table=11 CP118825.1 Genbank pseudogene 782721 783291 . - . ID=gene-PYH62_03855;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=pseudogene;locus_tag=PYH62_03855;pseudo=true CP118825.1 Protein Homology CDS 782721 783291 . - 0 ID=cds-PYH62_03855;Parent=gene-PYH62_03855;Note=frameshifted;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175295.1;locus_tag=PYH62_03855;product=3-isopropylmalate dehydratase small subunit;pseudo=true;transl_table=11 CP118825.1 Genbank gene 783295 784665 . - . ID=gene-PYH62_03860;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=PYH62_03860 CP118825.1 Protein Homology CDS 783295 784665 . - 0 ID=cds-WHI79941.1;Parent=gene-PYH62_03860;Dbxref=NCBI_GP:WHI79941.1;Name=WHI79941.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500769.1;locus_tag=PYH62_03860;product=3-isopropylmalate dehydratase large subunit;protein_id=WHI79941.1;transl_table=11 CP118825.1 Genbank gene 784683 785726 . - . ID=gene-PYH62_03865;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=PYH62_03865 CP118825.1 Protein Homology CDS 784683 785726 . - 0 ID=cds-WHI79942.1;Parent=gene-PYH62_03865;Dbxref=NCBI_GP:WHI79942.1;Name=WHI79942.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455077.1;locus_tag=PYH62_03865;product=3-isopropylmalate dehydrogenase;protein_id=WHI79942.1;transl_table=11 CP118825.1 Genbank gene 785726 787258 . - . ID=gene-PYH62_03870;Name=PYH62_03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03870 CP118825.1 Protein Homology CDS 785726 787258 . - 0 ID=cds-WHI79943.1;Parent=gene-PYH62_03870;Dbxref=NCBI_GP:WHI79943.1;Name=WHI79943.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455078.1;locus_tag=PYH62_03870;product=2-isopropylmalate synthase;protein_id=WHI79943.1;transl_table=11 CP118825.1 Genbank gene 787272 788282 . - . ID=gene-PYH62_03875;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=PYH62_03875 CP118825.1 Protein Homology CDS 787272 788282 . - 0 ID=cds-WHI79944.1;Parent=gene-PYH62_03875;Dbxref=NCBI_GP:WHI79944.1;Name=WHI79944.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000214553.1;locus_tag=PYH62_03875;product=ketol-acid reductoisomerase;protein_id=WHI79944.1;transl_table=11 CP118825.1 Genbank gene 788408 788647 . - . ID=gene-PYH62_03880;Name=PYH62_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03880 CP118825.1 Protein Homology CDS 788408 788647 . - 0 ID=cds-WHI79945.1;Parent=gene-PYH62_03880;Dbxref=NCBI_GP:WHI79945.1;Name=WHI79945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175291.1;locus_tag=PYH62_03880;product=ACT domain-containing protein;protein_id=WHI79945.1;transl_table=11 CP118825.1 Genbank pseudogene 788644 790363 . - . ID=gene-PYH62_03885;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=pseudogene;locus_tag=PYH62_03885;pseudo=true CP118825.1 Protein Homology CDS 788644 790363 . - 0 ID=cds-PYH62_03885;Parent=gene-PYH62_03885;Note=frameshifted;Ontology_term=GO:0009097,GO:0009099,GO:0003984,GO:0005948;gbkey=CDS;gene=ilvB;go_component=acetolactate synthase complex|0005948||IEA;go_function=acetolactate synthase activity|0003984||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488061.1;locus_tag=PYH62_03885;product=biosynthetic-type acetolactate synthase large subunit;pseudo=true;transl_table=11 CP118825.1 Genbank gene 790382 792070 . - . ID=gene-PYH62_03890;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=PYH62_03890 CP118825.1 Protein Homology CDS 790382 792070 . - 0 ID=cds-WHI79946.1;Parent=gene-PYH62_03890;Dbxref=NCBI_GP:WHI79946.1;Name=WHI79946.1;Ontology_term=GO:0009097,GO:0009099,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=isoleucine biosynthetic process|0009097||IEA,valine biosynthetic process|0009099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500763.1;locus_tag=PYH62_03890;product=dihydroxy-acid dehydratase;protein_id=WHI79946.1;transl_table=11 CP118825.1 Genbank gene 792513 792974 . + . ID=gene-PYH62_03895;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=PYH62_03895 CP118825.1 Protein Homology CDS 792513 792974 . + 0 ID=cds-WHI79947.1;Parent=gene-PYH62_03895;Dbxref=NCBI_GP:WHI79947.1;Name=WHI79947.1;Ontology_term=GO:0006400,GO:0016887,GO:0005737;gbkey=CDS;gene=tsaE;go_component=cytoplasm|0005737||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000590797.1;locus_tag=PYH62_03895;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WHI79947.1;transl_table=11 CP118825.1 Genbank gene 792955 793620 . + . ID=gene-PYH62_03900;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=PYH62_03900 CP118825.1 Protein Homology CDS 792955 793620 . + 0 ID=cds-WHI79948.1;Parent=gene-PYH62_03900;Dbxref=NCBI_GP:WHI79948.1;Name=WHI79948.1;Ontology_term=GO:0006400,GO:0003725;gbkey=CDS;gene=tsaB;go_function=double-stranded RNA binding|0003725||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020360111.1;locus_tag=PYH62_03900;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WHI79948.1;transl_table=11 CP118825.1 Genbank gene 793593 794057 . + . ID=gene-PYH62_03905;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=PYH62_03905 CP118825.1 Protein Homology CDS 793593 794057 . + 0 ID=cds-WHI79949.1;Parent=gene-PYH62_03905;Dbxref=NCBI_GP:WHI79949.1;Name=WHI79949.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=peptide-alanine-alpha-N-acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001611465.1;locus_tag=PYH62_03905;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WHI79949.1;transl_table=11 CP118825.1 Genbank gene 794050 795075 . + . ID=gene-PYH62_03910;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=PYH62_03910 CP118825.1 Protein Homology CDS 794050 795075 . + 0 ID=cds-WHI79950.1;Parent=gene-PYH62_03910;Dbxref=NCBI_GP:WHI79950.1;Name=WHI79950.1;Ontology_term=GO:0006400;gbkey=CDS;gene=tsaD;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500758.1;locus_tag=PYH62_03910;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WHI79950.1;transl_table=11 CP118825.1 Genbank gene 795413 797350 . - . ID=gene-PYH62_03915;Name=PYH62_03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03915 CP118825.1 Protein Homology CDS 795413 797350 . - 0 ID=cds-WHI79951.1;Parent=gene-PYH62_03915;Dbxref=NCBI_GP:WHI79951.1;Name=WHI79951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500755.1;locus_tag=PYH62_03915;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WHI79951.1;transl_table=11 CP118825.1 Genbank gene 797596 798234 . + . ID=gene-PYH62_03920;Name=PYH62_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03920 CP118825.1 Protein Homology CDS 797596 798234 . + 0 ID=cds-WHI79952.1;Parent=gene-PYH62_03920;Dbxref=NCBI_GP:WHI79952.1;Name=WHI79952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275294.1;locus_tag=PYH62_03920;product=redox-sensing transcriptional repressor Rex;protein_id=WHI79952.1;transl_table=11 CP118825.1 Genbank gene 798378 799466 . + . ID=gene-PYH62_03925;Name=PYH62_03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03925 CP118825.1 Protein Homology CDS 798378 799466 . + 0 ID=cds-WHI80235.1;Parent=gene-PYH62_03925;Dbxref=NCBI_GP:WHI80235.1;Name=WHI80235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445321.1;locus_tag=PYH62_03925;product=YeeE/YedE family protein;protein_id=WHI80235.1;transl_table=11 CP118825.1 Genbank gene 799484 799708 . + . ID=gene-PYH62_03930;Name=PYH62_03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03930 CP118825.1 Protein Homology CDS 799484 799708 . + 0 ID=cds-WHI79953.1;Parent=gene-PYH62_03930;Dbxref=NCBI_GP:WHI79953.1;Name=WHI79953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830019.1;locus_tag=PYH62_03930;product=sulfurtransferase TusA family protein;protein_id=WHI79953.1;transl_table=11 CP118825.1 Genbank gene 799818 801062 . + . ID=gene-PYH62_03935;Name=PYH62_03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03935 CP118825.1 Protein Homology CDS 799818 801062 . + 0 ID=cds-WHI79954.1;Parent=gene-PYH62_03935;Dbxref=NCBI_GP:WHI79954.1;Name=WHI79954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448259.1;locus_tag=PYH62_03935;product=ammonium transporter;protein_id=WHI79954.1;transl_table=11 CP118825.1 Genbank gene 801318 802805 . + . ID=gene-PYH62_03940;Name=PYH62_03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03940 CP118825.1 Protein Homology CDS 801318 802805 . + 0 ID=cds-WHI79955.1;Parent=gene-PYH62_03940;Dbxref=NCBI_GP:WHI79955.1;Name=WHI79955.1;Ontology_term=GO:0005975,GO:0004564;gbkey=CDS;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455086.1;locus_tag=PYH62_03940;product=sucrose-6-phosphate hydrolase;protein_id=WHI79955.1;transl_table=11 CP118825.1 Genbank gene 802806 803765 . + . ID=gene-PYH62_03945;Name=PYH62_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03945 CP118825.1 Protein Homology CDS 802806 803765 . + 0 ID=cds-WHI79956.1;Parent=gene-PYH62_03945;Dbxref=NCBI_GP:WHI79956.1;Name=WHI79956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175280.1;locus_tag=PYH62_03945;product=carbohydrate kinase;protein_id=WHI79956.1;transl_table=11 CP118825.1 Genbank gene 803816 804532 . - . ID=gene-PYH62_03950;Name=PYH62_03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03950 CP118825.1 Protein Homology CDS 803816 804532 . - 0 ID=cds-WHI79957.1;Parent=gene-PYH62_03950;Dbxref=NCBI_GP:WHI79957.1;Name=WHI79957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000688500.1;locus_tag=PYH62_03950;product=LytTR family DNA-binding domain-containing protein;protein_id=WHI79957.1;transl_table=11 CP118825.1 Genbank gene 804545 805834 . - . ID=gene-PYH62_03955;Name=PYH62_03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03955 CP118825.1 Protein Homology CDS 804545 805834 . - 0 ID=cds-WHI79958.1;Parent=gene-PYH62_03955;Dbxref=NCBI_GP:WHI79958.1;Name=WHI79958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455089.1;locus_tag=PYH62_03955;product=GHKL domain-containing protein;protein_id=WHI79958.1;transl_table=11 CP118825.1 Genbank gene 805858 805998 . - . ID=gene-PYH62_03960;Name=PYH62_03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03960 CP118825.1 Protein Homology CDS 805858 805998 . - 0 ID=cds-WHI79959.1;Parent=gene-PYH62_03960;Dbxref=NCBI_GP:WHI79959.1;Name=WHI79959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835517.1;locus_tag=PYH62_03960;product=cyclic lactone autoinducer peptide;protein_id=WHI79959.1;transl_table=11 CP118825.1 Genbank gene 806001 806567 . - . ID=gene-PYH62_03965;Name=PYH62_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03965 CP118825.1 Protein Homology CDS 806001 806567 . - 0 ID=cds-WHI79960.1;Parent=gene-PYH62_03965;Dbxref=NCBI_GP:WHI79960.1;Name=WHI79960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488058.1;locus_tag=PYH62_03965;product=accessory gene regulator AgrB;protein_id=WHI79960.1;transl_table=11 CP118825.1 Genbank gene 807270 808055 . - . ID=gene-PYH62_03970;Name=PYH62_03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03970 CP118825.1 Protein Homology CDS 807270 808055 . - 0 ID=cds-WHI79961.1;Parent=gene-PYH62_03970;Dbxref=NCBI_GP:WHI79961.1;Name=WHI79961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363187.1;locus_tag=PYH62_03970;product=carbon-nitrogen family hydrolase;protein_id=WHI79961.1;transl_table=11 CP118825.1 Genbank gene 808186 808809 . - . ID=gene-PYH62_03975;Name=PYH62_03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03975 CP118825.1 Protein Homology CDS 808186 808809 . - 0 ID=cds-WHI79962.1;Parent=gene-PYH62_03975;Dbxref=NCBI_GP:WHI79962.1;Name=WHI79962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448275.1;locus_tag=PYH62_03975;product=nitroreductase family protein;protein_id=WHI79962.1;transl_table=11 CP118825.1 Genbank gene 808987 810594 . + . ID=gene-PYH62_03980;Name=PYH62_03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03980 CP118825.1 Protein Homology CDS 808987 810594 . + 0 ID=cds-WHI79963.1;Parent=gene-PYH62_03980;Dbxref=NCBI_GP:WHI79963.1;Name=WHI79963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175274.1;locus_tag=PYH62_03980;product=SdrH family protein;protein_id=WHI79963.1;transl_table=11 CP118825.1 Genbank gene 810553 811293 . - . ID=gene-PYH62_03985;Name=PYH62_03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_03985 CP118825.1 Protein Homology CDS 810553 811293 . - 0 ID=cds-WHI79964.1;Parent=gene-PYH62_03985;Dbxref=NCBI_GP:WHI79964.1;Name=WHI79964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455095.1;locus_tag=PYH62_03985;product=type II CAAX endopeptidase family protein;protein_id=WHI79964.1;transl_table=11 CP118825.1 Genbank gene 811468 811755 . + . ID=gene-PYH62_03990;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=PYH62_03990 CP118825.1 Protein Homology CDS 811468 811755 . + 0 ID=cds-WHI79965.1;Parent=gene-PYH62_03990;Dbxref=NCBI_GP:WHI79965.1;Name=WHI79965.1;gbkey=CDS;gene=groES;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175272.1;locus_tag=PYH62_03990;product=co-chaperone GroES;protein_id=WHI79965.1;transl_table=11 CP118825.1 Genbank gene 811812 813431 . + . ID=gene-PYH62_03995;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=PYH62_03995 CP118825.1 Protein Homology CDS 811812 813431 . + 0 ID=cds-WHI79966.1;Parent=gene-PYH62_03995;Dbxref=NCBI_GP:WHI79966.1;Name=WHI79966.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0006457,GO:0005515,GO:0016887;gbkey=CDS;gene=groL;go_function=protein binding|0005515||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500736.1;locus_tag=PYH62_03995;product=chaperonin GroEL;protein_id=WHI79966.1;transl_table=11 CP118825.1 Genbank pseudogene 813944 814159 . + . ID=gene-PYH62_04000;Name=PYH62_04000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_04000;pseudo=true CP118825.1 Protein Homology CDS 813944 814159 . + 0 ID=cds-PYH62_04000;Parent=gene-PYH62_04000;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001630144.1;locus_tag=PYH62_04000;product=hypothetical protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 814341 815012 . + . ID=gene-PYH62_04005;Name=PYH62_04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04005 CP118825.1 Protein Homology CDS 814341 815012 . + 0 ID=cds-WHI79967.1;Parent=gene-PYH62_04005;Dbxref=NCBI_GP:WHI79967.1;Name=WHI79967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450060.1;locus_tag=PYH62_04005;product=type 1 glutamine amidotransferase;protein_id=WHI79967.1;transl_table=11 CP118825.1 Genbank gene 815063 816349 . - . ID=gene-PYH62_04010;Name=PYH62_04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04010 CP118825.1 Protein Homology CDS 815063 816349 . - 0 ID=cds-WHI79968.1;Parent=gene-PYH62_04010;Dbxref=NCBI_GP:WHI79968.1;Name=WHI79968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012990793.1;locus_tag=PYH62_04010;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WHI79968.1;transl_table=11 CP118825.1 Genbank gene 816542 816637 . + . ID=gene-PYH62_04015;Name=PYH62_04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04015 CP118825.1 Protein Homology CDS 816542 816637 . + 0 ID=cds-WHI79969.1;Parent=gene-PYH62_04015;Dbxref=NCBI_GP:WHI79969.1;Name=WHI79969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440392.1;locus_tag=PYH62_04015;product=hypothetical protein;protein_id=WHI79969.1;transl_table=11 CP118825.1 Genbank gene 816819 816995 . + . ID=gene-PYH62_04020;Name=PYH62_04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04020 CP118825.1 Protein Homology CDS 816819 816995 . + 0 ID=cds-WHI80236.1;Parent=gene-PYH62_04020;Dbxref=NCBI_GP:WHI80236.1;Name=WHI80236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500646.1;locus_tag=PYH62_04020;product=hypothetical protein;protein_id=WHI80236.1;transl_table=11 CP118825.1 Genbank gene 817183 817563 . + . ID=gene-PYH62_04025;Name=PYH62_04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04025 CP118825.1 Protein Homology CDS 817183 817563 . + 0 ID=cds-WHI79970.1;Parent=gene-PYH62_04025;Dbxref=NCBI_GP:WHI79970.1;Name=WHI79970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450053.1;locus_tag=PYH62_04025;product=GntR family transcriptional regulator;protein_id=WHI79970.1;transl_table=11 CP118825.1 Genbank gene 817560 818459 . + . ID=gene-PYH62_04030;Name=PYH62_04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04030 CP118825.1 Protein Homology CDS 817560 818459 . + 0 ID=cds-WHI79971.1;Parent=gene-PYH62_04030;Dbxref=NCBI_GP:WHI79971.1;Name=WHI79971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835507.1;locus_tag=PYH62_04030;product=ABC transporter ATP-binding protein;protein_id=WHI79971.1;transl_table=11 CP118825.1 Genbank gene 818456 819118 . + . ID=gene-PYH62_04035;Name=PYH62_04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04035 CP118825.1 Protein Homology CDS 818456 819118 . + 0 ID=cds-WHI79972.1;Parent=gene-PYH62_04035;Dbxref=NCBI_GP:WHI79972.1;Name=WHI79972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450044.1;locus_tag=PYH62_04035;product=ABC-2 transporter permease;protein_id=WHI79972.1;transl_table=11 CP118825.1 Genbank gene 819136 820008 . + . ID=gene-PYH62_04040;Name=PYH62_04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04040 CP118825.1 Protein Homology CDS 819136 820008 . + 0 ID=cds-WHI79973.1;Parent=gene-PYH62_04040;Dbxref=NCBI_GP:WHI79973.1;Name=WHI79973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450019.1;locus_tag=PYH62_04040;product=ABC transporter ATP-binding protein;protein_id=WHI79973.1;transl_table=11 CP118825.1 Genbank gene 820009 820737 . + . ID=gene-PYH62_04045;Name=PYH62_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04045 CP118825.1 Protein Homology CDS 820009 820737 . + 0 ID=cds-WHI79974.1;Parent=gene-PYH62_04045;Dbxref=NCBI_GP:WHI79974.1;Name=WHI79974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450058.1;locus_tag=PYH62_04045;product=hypothetical protein;protein_id=WHI79974.1;transl_table=11 CP118825.1 Genbank gene 820883 821368 . + . ID=gene-PYH62_04050;Name=PYH62_04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04050 CP118825.1 Protein Homology CDS 820883 821368 . + 0 ID=cds-WHI79975.1;Parent=gene-PYH62_04050;Dbxref=NCBI_GP:WHI79975.1;Name=WHI79975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835506.1;locus_tag=PYH62_04050;product=hypothetical protein;protein_id=WHI79975.1;transl_table=11 CP118825.1 Genbank gene 821417 821971 . + . ID=gene-PYH62_04055;Name=PYH62_04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04055 CP118825.1 Protein Homology CDS 821417 821971 . + 0 ID=cds-WHI79976.1;Parent=gene-PYH62_04055;Dbxref=NCBI_GP:WHI79976.1;Name=WHI79976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835505.1;locus_tag=PYH62_04055;product=DUF1700 domain-containing protein;protein_id=WHI79976.1;transl_table=11 CP118825.1 Genbank gene 821971 822813 . + . ID=gene-PYH62_04060;Name=PYH62_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04060 CP118825.1 Protein Homology CDS 821971 822813 . + 0 ID=cds-WHI79977.1;Parent=gene-PYH62_04060;Dbxref=NCBI_GP:WHI79977.1;Name=WHI79977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835504.1;locus_tag=PYH62_04060;product=DUF4097 family beta strand repeat-containing protein;protein_id=WHI79977.1;transl_table=11 CP118825.1 Genbank gene 822879 823919 . - . ID=gene-PYH62_04065;Name=PYH62_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04065 CP118825.1 Protein Homology CDS 822879 823919 . - 0 ID=cds-WHI79978.1;Parent=gene-PYH62_04065;Dbxref=NCBI_GP:WHI79978.1;Name=WHI79978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455104.1;locus_tag=PYH62_04065;product=C45 family autoproteolytic acyltransferase/hydrolase;protein_id=WHI79978.1;transl_table=11 CP118825.1 Genbank pseudogene 824199 824373 . + . ID=gene-PYH62_04070;Name=PYH62_04070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_04070;pseudo=true CP118825.1 Protein Homology CDS 824199 824373 . + 0 ID=cds-PYH62_04070;Parent=gene-PYH62_04070;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450085.1;locus_tag=PYH62_04070;product=hypothetical protein;pseudo=true;transl_table=11 CP118825.1 Genbank pseudogene 824496 825543 . + . ID=gene-PYH62_04075;Name=PYH62_04075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_04075;pseudo=true CP118825.1 Protein Homology CDS 824496 825543 . + 0 ID=cds-PYH62_04075;Parent=gene-PYH62_04075;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450080.1;locus_tag=PYH62_04075;product=lactonase family protein;pseudo=true;transl_table=11 CP118825.1 Genbank pseudogene 825601 826984 . - . ID=gene-PYH62_04080;Name=PYH62_04080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_04080;pseudo=true CP118825.1 Protein Homology CDS 825601 826984 . - 0 ID=cds-PYH62_04080;Parent=gene-PYH62_04080;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835501.1;locus_tag=PYH62_04080;product=aldehyde dehydrogenase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 827164 828093 . - . ID=gene-PYH62_04085;Name=PYH62_04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04085 CP118825.1 Protein Homology CDS 827164 828093 . - 0 ID=cds-WHI79979.1;Parent=gene-PYH62_04085;Dbxref=NCBI_GP:WHI79979.1;Name=WHI79979.1;Ontology_term=GO:0004427;gbkey=CDS;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500630.1;locus_tag=PYH62_04085;product=manganese-dependent inorganic pyrophosphatase;protein_id=WHI79979.1;transl_table=11 CP118825.1 Genbank gene 828142 828702 . - . ID=gene-PYH62_04090;Name=PYH62_04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04090 CP118825.1 Protein Homology CDS 828142 828702 . - 0 ID=cds-WHI79980.1;Parent=gene-PYH62_04090;Dbxref=NCBI_GP:WHI79980.1;Name=WHI79980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488077.1;locus_tag=PYH62_04090;product=cysteine hydrolase;protein_id=WHI79980.1;transl_table=11 CP118825.1 Genbank gene 828836 829918 . + . ID=gene-PYH62_04095;Name=PYH62_04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04095 CP118825.1 Protein Homology CDS 828836 829918 . + 0 ID=cds-WHI80237.1;Parent=gene-PYH62_04095;Dbxref=NCBI_GP:WHI80237.1;Name=WHI80237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012990794.1;locus_tag=PYH62_04095;product=glycosyl hydrolase family 28-related protein;protein_id=WHI80237.1;transl_table=11 CP118825.1 Genbank gene 830185 831744 . + . ID=gene-PYH62_04100;Name=PYH62_04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04100 CP118825.1 Protein Homology CDS 830185 831744 . + 0 ID=cds-WHI79981.1;Parent=gene-PYH62_04100;Dbxref=NCBI_GP:WHI79981.1;Name=WHI79981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175254.1;locus_tag=PYH62_04100;product=SLC13 family permease;protein_id=WHI79981.1;transl_table=11 CP118825.1 Genbank gene 831925 832725 . - . ID=gene-PYH62_04105;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=PYH62_04105 CP118825.1 Protein Homology CDS 831925 832725 . - 0 ID=cds-WHI79982.1;Parent=gene-PYH62_04105;Dbxref=NCBI_GP:WHI79982.1;Name=WHI79982.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450078.1;locus_tag=PYH62_04105;product=prephenate dehydratase;protein_id=WHI79982.1;transl_table=11 CP118825.1 Genbank pseudogene 832756 833824 . - . ID=gene-PYH62_04110;Name=PYH62_04110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_04110;pseudo=true CP118825.1 Protein Homology CDS 832756 833824 . - 0 ID=cds-PYH62_04110;Parent=gene-PYH62_04110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470334.1;locus_tag=PYH62_04110;product=nitric oxide synthase oxygenase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 834003 835472 . + . ID=gene-PYH62_04115;Name=PYH62_04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04115 CP118825.1 Protein Homology CDS 834003 835472 . + 0 ID=cds-WHI79983.1;Parent=gene-PYH62_04115;Dbxref=NCBI_GP:WHI79983.1;Name=WHI79983.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500623.2;locus_tag=PYH62_04115;product=nicotinate phosphoribosyltransferase;protein_id=WHI79983.1;transl_table=11 CP118825.1 Genbank gene 835465 836301 . + . ID=gene-PYH62_04120;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=PYH62_04120 CP118825.1 Protein Homology CDS 835465 836301 . + 0 ID=cds-WHI79984.1;Parent=gene-PYH62_04120;Dbxref=NCBI_GP:WHI79984.1;Name=WHI79984.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835497.1;locus_tag=PYH62_04120;product=ammonia-dependent NAD(+) synthetase;protein_id=WHI79984.1;transl_table=11 CP118825.1 Genbank gene 836412 837017 . + . ID=gene-PYH62_04125;Name=PYH62_04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04125 CP118825.1 Protein Homology CDS 836412 837017 . + 0 ID=cds-WHI79985.1;Parent=gene-PYH62_04125;Dbxref=NCBI_GP:WHI79985.1;Name=WHI79985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500621.1;locus_tag=PYH62_04125;product=DUF2179 domain-containing protein;protein_id=WHI79985.1;transl_table=11 CP118825.1 Genbank gene 836998 837180 . + . ID=gene-PYH62_04130;Name=PYH62_04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04130 CP118825.1 Protein Homology CDS 836998 837180 . + 0 ID=cds-WHI79986.1;Parent=gene-PYH62_04130;Dbxref=NCBI_GP:WHI79986.1;Name=WHI79986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455112.1;locus_tag=PYH62_04130;product=NETI motif-containing protein;protein_id=WHI79986.1;transl_table=11 CP118825.1 Genbank gene 837403 838698 . + . ID=gene-PYH62_04135;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=PYH62_04135 CP118825.1 Protein Homology CDS 837403 838698 . + 0 ID=cds-WHI79987.1;Parent=gene-PYH62_04135;Dbxref=NCBI_GP:WHI79987.1;Name=WHI79987.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011302760.1;locus_tag=PYH62_04135;product=adenylosuccinate lyase;protein_id=WHI79987.1;transl_table=11 CP118825.1 Genbank gene 838803 839105 . + . ID=gene-PYH62_04140;Name=PYH62_04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04140 CP118825.1 Protein Homology CDS 838803 839105 . + 0 ID=cds-WHI79988.1;Parent=gene-PYH62_04140;Dbxref=NCBI_GP:WHI79988.1;Name=WHI79988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500616.1;locus_tag=PYH62_04140;product=YerC/YecD family TrpR-related protein;protein_id=WHI79988.1;transl_table=11 CP118825.1 Genbank gene 839265 839957 . + . ID=gene-PYH62_04145;Name=PYH62_04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04145 CP118825.1 Protein Homology CDS 839265 839957 . + 0 ID=cds-WHI79989.1;Parent=gene-PYH62_04145;Dbxref=NCBI_GP:WHI79989.1;Name=WHI79989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490295.1;locus_tag=PYH62_04145;product=heptaprenylglyceryl phosphate synthase;protein_id=WHI79989.1;transl_table=11 CP118825.1 Genbank gene 839957 842149 . + . ID=gene-PYH62_04150;Name=pcrA;gbkey=Gene;gene=pcrA;gene_biotype=protein_coding;locus_tag=PYH62_04150 CP118825.1 Protein Homology CDS 839957 842149 . + 0 ID=cds-WHI79990.1;Parent=gene-PYH62_04150;Dbxref=NCBI_GP:WHI79990.1;Name=WHI79990.1;Ontology_term=GO:0006268,GO:0006281,GO:0003678;gbkey=CDS;gene=pcrA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA unwinding involved in DNA replication|0006268||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500614.1;locus_tag=PYH62_04150;product=DNA helicase PcrA;protein_id=WHI79990.1;transl_table=11 CP118825.1 Genbank gene 842153 844156 . + . ID=gene-PYH62_04155;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=PYH62_04155 CP118825.1 Protein Homology CDS 842153 844156 . + 0 ID=cds-WHI79991.1;Parent=gene-PYH62_04155;Dbxref=NCBI_GP:WHI79991.1;Name=WHI79991.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477944.1;locus_tag=PYH62_04155;product=NAD-dependent DNA ligase LigA;protein_id=WHI79991.1;transl_table=11 CP118825.1 Genbank gene 844168 845367 . + . ID=gene-PYH62_04160;Name=PYH62_04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04160 CP118825.1 Protein Homology CDS 844168 845367 . + 0 ID=cds-WHI79992.1;Parent=gene-PYH62_04160;Dbxref=NCBI_GP:WHI79992.1;Name=WHI79992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001664913.1;locus_tag=PYH62_04160;product=CamS family sex pheromone protein;protein_id=WHI79992.1;transl_table=11 CP118825.1 Genbank gene 845427 846965 . - . ID=gene-PYH62_04165;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=PYH62_04165 CP118825.1 Protein Homology CDS 845427 846965 . - 0 ID=cds-WHI79993.1;Parent=gene-PYH62_04165;Dbxref=NCBI_GP:WHI79993.1;Name=WHI79993.1;Ontology_term=GO:0015824,GO:0005298,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA;go_process=proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488066.1;locus_tag=PYH62_04165;product=sodium/proline symporter PutP;protein_id=WHI79993.1;transl_table=11 CP118825.1 Genbank gene 847387 847689 . + . ID=gene-PYH62_04170;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=PYH62_04170 CP118825.1 Protein Homology CDS 847387 847689 . + 0 ID=cds-WHI79994.1;Parent=gene-PYH62_04170;Dbxref=NCBI_GP:WHI79994.1;Name=WHI79994.1;Ontology_term=GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500610.1;locus_tag=PYH62_04170;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WHI79994.1;transl_table=11 CP118825.1 Genbank gene 847691 849148 . + . ID=gene-PYH62_04175;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=PYH62_04175 CP118825.1 Protein Homology CDS 847691 849148 . + 0 ID=cds-WHI79995.1;Parent=gene-PYH62_04175;Dbxref=NCBI_GP:WHI79995.1;Name=WHI79995.1;Ontology_term=GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500609.1;locus_tag=PYH62_04175;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WHI79995.1;transl_table=11 CP118825.1 Genbank gene 849161 850588 . + . ID=gene-PYH62_04180;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=PYH62_04180 CP118825.1 Protein Homology CDS 849161 850588 . + 0 ID=cds-WHI79996.1;Parent=gene-PYH62_04180;Dbxref=NCBI_GP:WHI79996.1;Name=WHI79996.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500608.1;locus_tag=PYH62_04180;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WHI79996.1;transl_table=11 CP118825.1 Genbank gene 850902 851822 . + . ID=gene-PYH62_04185;Name=PYH62_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04185 CP118825.1 Protein Homology CDS 850902 851822 . + 0 ID=cds-WHI79997.1;Parent=gene-PYH62_04185;Dbxref=NCBI_GP:WHI79997.1;Name=WHI79997.1;Ontology_term=GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175239.1;locus_tag=PYH62_04185;product=diacylglycerol kinase;protein_id=WHI79997.1;transl_table=11 CP118825.1 Genbank gene 851953 853314 . + . ID=gene-PYH62_04190;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=PYH62_04190 CP118825.1 Protein Homology CDS 851953 853314 . + 0 ID=cds-WHI80238.1;Parent=gene-PYH62_04190;Dbxref=NCBI_GP:WHI80238.1;Name=WHI80238.1;Ontology_term=GO:0008649;gbkey=CDS;gene=rlmD;go_function=rRNA methyltransferase activity|0008649||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455120.1;locus_tag=PYH62_04190;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WHI80238.1;transl_table=11 CP118825.1 Genbank gene 853451 853999 . + . ID=gene-PYH62_04195;Name=PYH62_04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04195 CP118825.1 Protein Homology CDS 853451 853999 . + 0 ID=cds-WHI79998.1;Parent=gene-PYH62_04195;Dbxref=NCBI_GP:WHI79998.1;Name=WHI79998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175237.1;locus_tag=PYH62_04195;product=DUF3267 domain-containing protein;protein_id=WHI79998.1;transl_table=11 CP118825.1 Genbank gene 854108 855178 . + . ID=gene-PYH62_04200;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=PYH62_04200 CP118825.1 Protein Homology CDS 854108 855178 . + 0 ID=cds-WHI79999.1;Parent=gene-PYH62_04200;Dbxref=NCBI_GP:WHI79999.1;Name=WHI79999.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000140167.1;locus_tag=PYH62_04200;product=DNA polymerase IV;protein_id=WHI79999.1;transl_table=11 CP118825.1 Genbank gene 855206 855763 . - . ID=gene-PYH62_04205;Name=PYH62_04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04205 CP118825.1 Protein Homology CDS 855206 855763 . - 0 ID=cds-WHI80000.1;Parent=gene-PYH62_04205;Dbxref=NCBI_GP:WHI80000.1;Name=WHI80000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488078.1;locus_tag=PYH62_04205;product=3'-5' exonuclease;protein_id=WHI80000.1;transl_table=11 CP118825.1 Genbank gene 856003 857328 . + . ID=gene-PYH62_04210;Name=PYH62_04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04210 CP118825.1 Protein Homology CDS 856003 857328 . + 0 ID=cds-WHI80001.1;Parent=gene-PYH62_04210;Dbxref=NCBI_GP:WHI80001.1;Name=WHI80001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500599.1;locus_tag=PYH62_04210;product=Mur ligase family protein;protein_id=WHI80001.1;transl_table=11 CP118825.1 Genbank gene 857316 858035 . + . ID=gene-PYH62_04215;Name=PYH62_04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04215 CP118825.1 Protein Homology CDS 857316 858035 . + 0 ID=cds-WHI80002.1;Parent=gene-PYH62_04215;Dbxref=NCBI_GP:WHI80002.1;Name=WHI80002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175233.1;locus_tag=PYH62_04215;product=type 1 glutamine amidotransferase;protein_id=WHI80002.1;transl_table=11 CP118825.1 Genbank gene 858080 859069 . - . ID=gene-PYH62_04220;Name=PYH62_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04220 CP118825.1 Protein Homology CDS 858080 859069 . - 0 ID=cds-WHI80003.1;Parent=gene-PYH62_04220;Dbxref=NCBI_GP:WHI80003.1;Name=WHI80003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455124.1;locus_tag=PYH62_04220;product=aromatic acid exporter family protein;protein_id=WHI80003.1;transl_table=11 CP118825.1 Genbank gene 859243 859995 . + . ID=gene-PYH62_04225;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=PYH62_04225 CP118825.1 Protein Homology CDS 859243 859995 . + 0 ID=cds-WHI80004.1;Parent=gene-PYH62_04225;Dbxref=NCBI_GP:WHI80004.1;Name=WHI80004.1;Ontology_term=GO:0036211;gbkey=CDS;gene=map;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469612.1;locus_tag=PYH62_04225;product=type I methionyl aminopeptidase;protein_id=WHI80004.1;transl_table=11 CP118825.1 Genbank pseudogene 860250 860366 . - . ID=gene-PYH62_04230;Name=PYH62_04230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_04230;pseudo=true CP118825.1 Protein Homology CDS 860250 860366 . - 0 ID=cds-PYH62_04230;Parent=gene-PYH62_04230;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000598942.1;locus_tag=PYH62_04230;product=nickel transporter NixA;pseudo=true;transl_table=11 CP118825.1 Genbank gene 860672 861058 . + . ID=gene-PYH62_04235;Name=PYH62_04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04235 CP118825.1 Protein Homology CDS 860672 861058 . + 0 ID=cds-WHI80005.1;Parent=gene-PYH62_04235;Dbxref=NCBI_GP:WHI80005.1;Name=WHI80005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450072.1;locus_tag=PYH62_04235;product=hypothetical protein;protein_id=WHI80005.1;transl_table=11 CP118825.1 Genbank gene 861080 861781 . + . ID=gene-PYH62_04240;Name=liaF;gbkey=Gene;gene=liaF;gene_biotype=protein_coding;locus_tag=PYH62_04240 CP118825.1 Protein Homology CDS 861080 861781 . + 0 ID=cds-WHI80006.1;Parent=gene-PYH62_04240;Dbxref=NCBI_GP:WHI80006.1;Name=WHI80006.1;gbkey=CDS;gene=liaF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500591.1;locus_tag=PYH62_04240;product=cell wall-active antibiotics response protein LiaF;protein_id=WHI80006.1;transl_table=11 CP118825.1 Genbank gene 861778 862812 . + . ID=gene-PYH62_04245;Name=PYH62_04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04245 CP118825.1 Protein Homology CDS 861778 862812 . + 0 ID=cds-WHI80007.1;Parent=gene-PYH62_04245;Dbxref=NCBI_GP:WHI80007.1;Name=WHI80007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450020.1;locus_tag=PYH62_04245;product=sensor histidine kinase;protein_id=WHI80007.1;transl_table=11 CP118825.1 Genbank gene 862814 863443 . + . ID=gene-PYH62_04250;Name=vraR;gbkey=Gene;gene=vraR;gene_biotype=protein_coding;locus_tag=PYH62_04250 CP118825.1 Protein Homology CDS 862814 863443 . + 0 ID=cds-WHI80008.1;Parent=gene-PYH62_04250;Dbxref=NCBI_GP:WHI80008.1;Name=WHI80008.1;gbkey=CDS;gene=vraR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500589.1;locus_tag=PYH62_04250;product=two-component system response regulator VraR;protein_id=WHI80008.1;transl_table=11 CP118825.1 Genbank gene 863522 864724 . - . ID=gene-PYH62_04255;Name=PYH62_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04255 CP118825.1 Protein Homology CDS 863522 864724 . - 0 ID=cds-WHI80009.1;Parent=gene-PYH62_04255;Dbxref=NCBI_GP:WHI80009.1;Name=WHI80009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000037089.1;locus_tag=PYH62_04255;product=YihY/virulence factor BrkB family protein;protein_id=WHI80009.1;transl_table=11 CP118825.1 Genbank gene 864816 865097 . - . ID=gene-PYH62_04260;Name=PYH62_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04260 CP118825.1 Protein Homology CDS 864816 865097 . - 0 ID=cds-WHI80010.1;Parent=gene-PYH62_04260;Dbxref=NCBI_GP:WHI80010.1;Name=WHI80010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488074.1;locus_tag=PYH62_04260;product=YtxH domain-containing protein;protein_id=WHI80010.1;transl_table=11 CP118825.1 Genbank gene 865103 865567 . - . ID=gene-PYH62_04265;Name=PYH62_04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04265 CP118825.1 Protein Homology CDS 865103 865567 . - 0 ID=cds-WHI80011.1;Parent=gene-PYH62_04265;Dbxref=NCBI_GP:WHI80011.1;Name=WHI80011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500586.1;locus_tag=PYH62_04265;product=low molecular weight phosphotyrosine protein phosphatase;protein_id=WHI80011.1;transl_table=11 CP118825.1 Genbank gene 865709 865915 . + . ID=gene-PYH62_04270;Name=PYH62_04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04270 CP118825.1 Protein Homology CDS 865709 865915 . + 0 ID=cds-WHI80012.1;Parent=gene-PYH62_04270;Dbxref=NCBI_GP:WHI80012.1;Name=WHI80012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275380.1;locus_tag=PYH62_04270;product=DUF1128 domain-containing protein;protein_id=WHI80012.1;transl_table=11 CP118825.1 Genbank gene 865927 867174 . + . ID=gene-PYH62_04275;Name=PYH62_04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04275 CP118825.1 Protein Homology CDS 865927 867174 . + 0 ID=cds-WHI80013.1;Parent=gene-PYH62_04275;Dbxref=NCBI_GP:WHI80013.1;Name=WHI80013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488059.1;locus_tag=PYH62_04275;product=aminopeptidase;protein_id=WHI80013.1;transl_table=11 CP118825.1 Genbank gene 867207 867740 . + . ID=gene-PYH62_04280;Name=PYH62_04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04280 CP118825.1 Protein Homology CDS 867207 867740 . + 0 ID=cds-WHI80014.1;Parent=gene-PYH62_04280;Dbxref=NCBI_GP:WHI80014.1;Name=WHI80014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488082.1;locus_tag=PYH62_04280;product=acyl-CoA thioesterase;protein_id=WHI80014.1;transl_table=11 CP118825.1 Genbank gene 868043 869188 . - . ID=gene-PYH62_04285;Name=yfkAB;gbkey=Gene;gene=yfkAB;gene_biotype=protein_coding;locus_tag=PYH62_04285 CP118825.1 Protein Homology CDS 868043 869188 . - 0 ID=cds-WHI80015.1;Parent=gene-PYH62_04285;Dbxref=NCBI_GP:WHI80015.1;Name=WHI80015.1;Ontology_term=GO:0008152,GO:0051539,GO:1904047;gbkey=CDS;gene=yfkAB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488050.1;locus_tag=PYH62_04285;product=radical SAM/CxCxxxxC motif protein YfkAB;protein_id=WHI80015.1;transl_table=11 CP118825.1 Genbank gene 869332 869493 . + . ID=gene-PYH62_04290;Name=PYH62_04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04290 CP118825.1 Protein Homology CDS 869332 869493 . + 0 ID=cds-WHI80016.1;Parent=gene-PYH62_04290;Dbxref=NCBI_GP:WHI80016.1;Name=WHI80016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500511.1;locus_tag=PYH62_04290;product=SE1561 family protein;protein_id=WHI80016.1;transl_table=11 CP118825.1 Genbank gene 869602 870120 . + . ID=gene-PYH62_04295;Name=PYH62_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04295 CP118825.1 Protein Homology CDS 869602 870120 . + 0 ID=cds-WHI80017.1;Parent=gene-PYH62_04295;Dbxref=NCBI_GP:WHI80017.1;Name=WHI80017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450071.1;locus_tag=PYH62_04295;product=type 1 glutamine amidotransferase;protein_id=WHI80017.1;transl_table=11 CP118825.1 Genbank gene 870572 871384 . + . ID=gene-PYH62_04300;Name=sgtB;gbkey=Gene;gene=sgtB;gene_biotype=protein_coding;locus_tag=PYH62_04300 CP118825.1 Protein Homology CDS 870572 871384 . + 0 ID=cds-WHI80018.1;Parent=gene-PYH62_04300;Dbxref=NCBI_GP:WHI80018.1;Name=WHI80018.1;gbkey=CDS;gene=sgtB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835722.1;locus_tag=PYH62_04300;product=monofunctional peptidoglycan glycosyltransferase SgtB;protein_id=WHI80018.1;transl_table=11 CP118825.1 Genbank gene 871553 872356 . + . ID=gene-PYH62_04305;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=PYH62_04305 CP118825.1 Protein Homology CDS 871553 872356 . + 0 ID=cds-WHI80019.1;Parent=gene-PYH62_04305;Dbxref=NCBI_GP:WHI80019.1;Name=WHI80019.1;Ontology_term=GO:0006282;gbkey=CDS;gene=recX;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002477604.1;locus_tag=PYH62_04305;product=recombination regulator RecX;protein_id=WHI80019.1;transl_table=11 CP118825.1 Genbank gene 872349 872663 . + . ID=gene-PYH62_04310;Name=PYH62_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04310 CP118825.1 Protein Homology CDS 872349 872663 . + 0 ID=cds-WHI80020.1;Parent=gene-PYH62_04310;Dbxref=NCBI_GP:WHI80020.1;Name=WHI80020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000435810.1;locus_tag=PYH62_04310;product=YfhH family protein;protein_id=WHI80020.1;transl_table=11 CP118825.1 Genbank gene 872679 874196 . + . ID=gene-PYH62_04315;Name=PYH62_04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04315 CP118825.1 Protein Homology CDS 872679 874196 . + 0 ID=cds-WHI80021.1;Parent=gene-PYH62_04315;Dbxref=NCBI_GP:WHI80021.1;Name=WHI80021.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804867.1;locus_tag=PYH62_04315;product=ATP-binding cassette domain-containing protein;protein_id=WHI80021.1;transl_table=11 CP118825.1 Genbank gene 874205 874969 . + . ID=gene-PYH62_04320;Name=PYH62_04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04320 CP118825.1 Protein Homology CDS 874205 874969 . + 0 ID=cds-WHI80022.1;Parent=gene-PYH62_04320;Dbxref=NCBI_GP:WHI80022.1;Name=WHI80022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488069.1;locus_tag=PYH62_04320;product=teichoic acid transporter;protein_id=WHI80022.1;transl_table=11 CP118825.1 Genbank gene 875087 876064 . - . ID=gene-PYH62_04325;Name=PYH62_04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04325 CP118825.1 Protein Homology CDS 875087 876064 . - 0 ID=cds-WHI80023.1;Parent=gene-PYH62_04325;Dbxref=NCBI_GP:WHI80023.1;Name=WHI80023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455135.1;locus_tag=PYH62_04325;product=metal-dependent hydrolase;protein_id=WHI80023.1;transl_table=11 CP118825.1 Genbank gene 876200 877246 . + . ID=gene-PYH62_04330;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=PYH62_04330 CP118825.1 Protein Homology CDS 876200 877246 . + 0 ID=cds-WHI80024.1;Parent=gene-PYH62_04330;Dbxref=NCBI_GP:WHI80024.1;Name=WHI80024.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0004844;gbkey=CDS;gene=mutY;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835725.1;locus_tag=PYH62_04330;product=A/G-specific adenine glycosylase;protein_id=WHI80024.1;transl_table=11 CP118825.1 Genbank gene 877339 877881 . + . ID=gene-PYH62_04335;Name=PYH62_04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04335 CP118825.1 Protein Homology CDS 877339 877881 . + 0 ID=cds-WHI80025.1;Parent=gene-PYH62_04335;Dbxref=NCBI_GP:WHI80025.1;Name=WHI80025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500501.1;locus_tag=PYH62_04335;product=DUF402 domain-containing protein;protein_id=WHI80025.1;transl_table=11 CP118825.1 Genbank gene 878036 879772 . + . ID=gene-PYH62_04340;Name=PYH62_04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04340 CP118825.1 Protein Homology CDS 878036 879772 . + 0 ID=cds-WHI80026.1;Parent=gene-PYH62_04340;Dbxref=NCBI_GP:WHI80026.1;Name=WHI80026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500500.1;locus_tag=PYH62_04340;product=ABC transporter ATP-binding protein;protein_id=WHI80026.1;transl_table=11 CP118825.1 Genbank gene 879850 880944 . - . ID=gene-PYH62_04345;Name=PYH62_04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04345 CP118825.1 Protein Homology CDS 879850 880944 . - 0 ID=cds-WHI80027.1;Parent=gene-PYH62_04345;Dbxref=NCBI_GP:WHI80027.1;Name=WHI80027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014667727.1;locus_tag=PYH62_04345;product=aromatic acid exporter family protein;protein_id=WHI80027.1;transl_table=11 CP118825.1 Genbank gene 881099 882388 . - . ID=gene-PYH62_04350;Name=PYH62_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04350 CP118825.1 Protein Homology CDS 881099 882388 . - 0 ID=cds-WHI80028.1;Parent=gene-PYH62_04350;Dbxref=NCBI_GP:WHI80028.1;Name=WHI80028.1;Ontology_term=GO:0033014,GO:0030170,GO:0042286;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500497.2;locus_tag=PYH62_04350;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WHI80028.1;transl_table=11 CP118825.1 Genbank gene 882469 882924 . + . ID=gene-PYH62_04355;Name=PYH62_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04355 CP118825.1 Protein Homology CDS 882469 882924 . + 0 ID=cds-WHI80029.1;Parent=gene-PYH62_04355;Dbxref=NCBI_GP:WHI80029.1;Name=WHI80029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488387.1;locus_tag=PYH62_04355;product=peroxiredoxin;protein_id=WHI80029.1;transl_table=11 CP118825.1 Genbank gene 882930 883880 . + . ID=gene-PYH62_04360;Name=PYH62_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04360 CP118825.1 Protein Homology CDS 882930 883880 . + 0 ID=cds-WHI80030.1;Parent=gene-PYH62_04360;Dbxref=NCBI_GP:WHI80030.1;Name=WHI80030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020365541.1;locus_tag=PYH62_04360;product=phosphoglycerate dehydrogenase;protein_id=WHI80030.1;transl_table=11 CP118825.1 Genbank pseudogene 883976 884426 . + . ID=gene-PYH62_04365;Name=perR;gbkey=Gene;gene=perR;gene_biotype=pseudogene;locus_tag=PYH62_04365;pseudo=true CP118825.1 Protein Homology CDS 883976 884426 . + 0 ID=cds-PYH62_04365;Parent=gene-PYH62_04365;Note=frameshifted;gbkey=CDS;gene=perR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175209.1;locus_tag=PYH62_04365;product=peroxide-responsive transcriptional repressor PerR;pseudo=true;transl_table=11 CP118825.1 Genbank gene 884954 886504 . + . ID=gene-PYH62_04370;Name=PYH62_04370;gbkey=Gene;gene_biotype=rRNA;locus_tag=PYH62_04370 CP118825.1 cmsearch rRNA 884954 886504 . + . ID=rna-PYH62_04370;Parent=gene-PYH62_04370;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_04370;product=16S ribosomal RNA CP118825.1 cmsearch exon 884954 886504 . + . ID=exon-PYH62_04370-1;Parent=rna-PYH62_04370;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_04370;product=16S ribosomal RNA CP118825.1 Genbank gene 886604 886680 . + . ID=gene-PYH62_04375;Name=PYH62_04375;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04375 CP118825.1 tRNAscan-SE tRNA 886604 886680 . + . ID=rna-PYH62_04375;Parent=gene-PYH62_04375;anticodon=(pos:886638..886640);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04375;product=tRNA-Ile CP118825.1 tRNAscan-SE exon 886604 886680 . + . ID=exon-PYH62_04375-1;Parent=rna-PYH62_04375;anticodon=(pos:886638..886640);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04375;product=tRNA-Ile CP118825.1 Genbank gene 886699 886774 . + . ID=gene-PYH62_04380;Name=PYH62_04380;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04380 CP118825.1 tRNAscan-SE tRNA 886699 886774 . + . ID=rna-PYH62_04380;Parent=gene-PYH62_04380;anticodon=(pos:886732..886734);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04380;product=tRNA-Ala CP118825.1 tRNAscan-SE exon 886699 886774 . + . ID=exon-PYH62_04380-1;Parent=rna-PYH62_04380;anticodon=(pos:886732..886734);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04380;product=tRNA-Ala CP118825.1 Genbank gene 886920 889841 . + . ID=gene-PYH62_04385;Name=PYH62_04385;gbkey=Gene;gene_biotype=rRNA;locus_tag=PYH62_04385 CP118825.1 cmsearch rRNA 886920 889841 . + . ID=rna-PYH62_04385;Parent=gene-PYH62_04385;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_04385;product=23S ribosomal RNA CP118825.1 cmsearch exon 886920 889841 . + . ID=exon-PYH62_04385-1;Parent=rna-PYH62_04385;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_04385;product=23S ribosomal RNA CP118825.1 Genbank gene 889909 890023 . + . ID=gene-PYH62_04390;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PYH62_04390 CP118825.1 cmsearch rRNA 889909 890023 . + . ID=rna-PYH62_04390;Parent=gene-PYH62_04390;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_04390;product=5S ribosomal RNA CP118825.1 cmsearch exon 889909 890023 . + . ID=exon-PYH62_04390-1;Parent=rna-PYH62_04390;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_04390;product=5S ribosomal RNA CP118825.1 Genbank gene 890033 890108 . + . ID=gene-PYH62_04395;Name=PYH62_04395;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04395 CP118825.1 tRNAscan-SE tRNA 890033 890108 . + . ID=rna-PYH62_04395;Parent=gene-PYH62_04395;anticodon=(pos:890066..890068);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04395;product=tRNA-Val CP118825.1 tRNAscan-SE exon 890033 890108 . + . ID=exon-PYH62_04395-1;Parent=rna-PYH62_04395;anticodon=(pos:890066..890068);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04395;product=tRNA-Val CP118825.1 Genbank gene 890121 890196 . + . ID=gene-PYH62_04400;Name=PYH62_04400;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04400 CP118825.1 tRNAscan-SE tRNA 890121 890196 . + . ID=rna-PYH62_04400;Parent=gene-PYH62_04400;anticodon=(pos:890154..890156);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04400;product=tRNA-Thr CP118825.1 tRNAscan-SE exon 890121 890196 . + . ID=exon-PYH62_04400-1;Parent=rna-PYH62_04400;anticodon=(pos:890154..890156);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04400;product=tRNA-Thr CP118825.1 Genbank gene 890202 890274 . + . ID=gene-PYH62_04405;Name=PYH62_04405;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04405 CP118825.1 tRNAscan-SE tRNA 890202 890274 . + . ID=rna-PYH62_04405;Parent=gene-PYH62_04405;anticodon=(pos:890235..890237);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04405;product=tRNA-Lys CP118825.1 tRNAscan-SE exon 890202 890274 . + . ID=exon-PYH62_04405-1;Parent=rna-PYH62_04405;anticodon=(pos:890235..890237);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04405;product=tRNA-Lys CP118825.1 Genbank gene 890284 890365 . + . ID=gene-PYH62_04410;Name=PYH62_04410;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04410 CP118825.1 tRNAscan-SE tRNA 890284 890365 . + . ID=rna-PYH62_04410;Parent=gene-PYH62_04410;anticodon=(pos:890318..890320);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04410;product=tRNA-Leu CP118825.1 tRNAscan-SE exon 890284 890365 . + . ID=exon-PYH62_04410-1;Parent=rna-PYH62_04410;anticodon=(pos:890318..890320);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04410;product=tRNA-Leu CP118825.1 Genbank gene 890369 890443 . + . ID=gene-PYH62_04415;Name=PYH62_04415;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04415 CP118825.1 tRNAscan-SE tRNA 890369 890443 . + . ID=rna-PYH62_04415;Parent=gene-PYH62_04415;anticodon=(pos:890401..890403);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04415;product=tRNA-Gly CP118825.1 tRNAscan-SE exon 890369 890443 . + . ID=exon-PYH62_04415-1;Parent=rna-PYH62_04415;anticodon=(pos:890401..890403);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04415;product=tRNA-Gly CP118825.1 Genbank gene 890451 890536 . + . ID=gene-PYH62_04420;Name=PYH62_04420;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04420 CP118825.1 tRNAscan-SE tRNA 890451 890536 . + . ID=rna-PYH62_04420;Parent=gene-PYH62_04420;anticodon=(pos:890485..890487);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04420;product=tRNA-Leu CP118825.1 tRNAscan-SE exon 890451 890536 . + . ID=exon-PYH62_04420-1;Parent=rna-PYH62_04420;anticodon=(pos:890485..890487);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04420;product=tRNA-Leu CP118825.1 Genbank gene 890547 890620 . + . ID=gene-PYH62_04425;Name=PYH62_04425;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04425 CP118825.1 tRNAscan-SE tRNA 890547 890620 . + . ID=rna-PYH62_04425;Parent=gene-PYH62_04425;anticodon=(pos:890581..890583);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04425;product=tRNA-Arg CP118825.1 tRNAscan-SE exon 890547 890620 . + . ID=exon-PYH62_04425-1;Parent=rna-PYH62_04425;anticodon=(pos:890581..890583);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04425;product=tRNA-Arg CP118825.1 Genbank gene 890629 890702 . + . ID=gene-PYH62_04430;Name=PYH62_04430;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04430 CP118825.1 tRNAscan-SE tRNA 890629 890702 . + . ID=rna-PYH62_04430;Parent=gene-PYH62_04430;anticodon=(pos:890663..890665);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04430;product=tRNA-Pro CP118825.1 tRNAscan-SE exon 890629 890702 . + . ID=exon-PYH62_04430-1;Parent=rna-PYH62_04430;anticodon=(pos:890663..890665);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04430;product=tRNA-Pro CP118825.1 Genbank gene 890725 890801 . + . ID=gene-PYH62_04435;Name=PYH62_04435;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04435 CP118825.1 tRNAscan-SE tRNA 890725 890801 . + . ID=rna-PYH62_04435;Parent=gene-PYH62_04435;anticodon=(pos:890759..890761);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04435;product=tRNA-Ala CP118825.1 tRNAscan-SE exon 890725 890801 . + . ID=exon-PYH62_04435-1;Parent=rna-PYH62_04435;anticodon=(pos:890759..890761);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04435;product=tRNA-Ala CP118825.1 Genbank gene 890828 890901 . + . ID=gene-PYH62_04440;Name=PYH62_04440;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04440 CP118825.1 tRNAscan-SE tRNA 890828 890901 . + . ID=rna-PYH62_04440;Parent=gene-PYH62_04440;anticodon=(pos:890862..890864);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04440;product=tRNA-Met CP118825.1 tRNAscan-SE exon 890828 890901 . + . ID=exon-PYH62_04440-1;Parent=rna-PYH62_04440;anticodon=(pos:890862..890864);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04440;product=tRNA-Met CP118825.1 Genbank gene 890930 891003 . + . ID=gene-PYH62_04445;Name=PYH62_04445;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04445 CP118825.1 tRNAscan-SE tRNA 890930 891003 . + . ID=rna-PYH62_04445;Parent=gene-PYH62_04445;anticodon=(pos:890964..890966);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04445;product=tRNA-Ile CP118825.1 tRNAscan-SE exon 890930 891003 . + . ID=exon-PYH62_04445-1;Parent=rna-PYH62_04445;anticodon=(pos:890964..890966);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04445;product=tRNA-Ile CP118825.1 Genbank gene 891013 891102 . + . ID=gene-PYH62_04450;Name=PYH62_04450;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04450 CP118825.1 tRNAscan-SE tRNA 891013 891102 . + . ID=rna-PYH62_04450;Parent=gene-PYH62_04450;anticodon=(pos:891049..891051);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04450;product=tRNA-Ser CP118825.1 tRNAscan-SE exon 891013 891102 . + . ID=exon-PYH62_04450-1;Parent=rna-PYH62_04450;anticodon=(pos:891049..891051);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04450;product=tRNA-Ser CP118825.1 Genbank gene 891108 891183 . + . ID=gene-PYH62_04455;Name=PYH62_04455;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04455 CP118825.1 tRNAscan-SE tRNA 891108 891183 . + . ID=rna-PYH62_04455;Parent=gene-PYH62_04455;anticodon=(pos:891141..891143);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04455;product=tRNA-Asp CP118825.1 tRNAscan-SE exon 891108 891183 . + . ID=exon-PYH62_04455-1;Parent=rna-PYH62_04455;anticodon=(pos:891141..891143);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04455;product=tRNA-Asp CP118825.1 Genbank gene 891219 891311 . + . ID=gene-PYH62_04460;Name=PYH62_04460;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04460 CP118825.1 tRNAscan-SE tRNA 891219 891311 . + . ID=rna-PYH62_04460;Parent=gene-PYH62_04460;anticodon=(pos:891255..891257);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04460;product=tRNA-Ser CP118825.1 tRNAscan-SE exon 891219 891311 . + . ID=exon-PYH62_04460-1;Parent=rna-PYH62_04460;anticodon=(pos:891255..891257);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04460;product=tRNA-Ser CP118825.1 Genbank gene 891322 891395 . + . ID=gene-PYH62_04465;Name=PYH62_04465;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04465 CP118825.1 tRNAscan-SE tRNA 891322 891395 . + . ID=rna-PYH62_04465;Parent=gene-PYH62_04465;anticodon=(pos:891356..891358);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04465;product=tRNA-Met CP118825.1 tRNAscan-SE exon 891322 891395 . + . ID=exon-PYH62_04465-1;Parent=rna-PYH62_04465;anticodon=(pos:891356..891358);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04465;product=tRNA-Met CP118825.1 Genbank gene 891404 891479 . + . ID=gene-PYH62_04470;Name=PYH62_04470;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04470 CP118825.1 tRNAscan-SE tRNA 891404 891479 . + . ID=rna-PYH62_04470;Parent=gene-PYH62_04470;anticodon=(pos:891437..891439);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04470;product=tRNA-Asp CP118825.1 tRNAscan-SE exon 891404 891479 . + . ID=exon-PYH62_04470-1;Parent=rna-PYH62_04470;anticodon=(pos:891437..891439);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04470;product=tRNA-Asp CP118825.1 Genbank gene 891501 891573 . + . ID=gene-PYH62_04475;Name=PYH62_04475;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04475 CP118825.1 tRNAscan-SE tRNA 891501 891573 . + . ID=rna-PYH62_04475;Parent=gene-PYH62_04475;anticodon=(pos:891534..891536);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04475;product=tRNA-Phe CP118825.1 tRNAscan-SE exon 891501 891573 . + . ID=exon-PYH62_04475-1;Parent=rna-PYH62_04475;anticodon=(pos:891534..891536);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04475;product=tRNA-Phe CP118825.1 Genbank gene 891580 891655 . + . ID=gene-PYH62_04480;Name=PYH62_04480;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04480 CP118825.1 tRNAscan-SE tRNA 891580 891655 . + . ID=rna-PYH62_04480;Parent=gene-PYH62_04480;anticodon=(pos:891613..891615);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04480;product=tRNA-Thr CP118825.1 tRNAscan-SE exon 891580 891655 . + . ID=exon-PYH62_04480-1;Parent=rna-PYH62_04480;anticodon=(pos:891613..891615);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04480;product=tRNA-Thr CP118825.1 Genbank gene 891663 891746 . + . ID=gene-PYH62_04485;Name=PYH62_04485;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04485 CP118825.1 tRNAscan-SE tRNA 891663 891746 . + . ID=rna-PYH62_04485;Parent=gene-PYH62_04485;anticodon=(pos:891697..891699);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04485;product=tRNA-Tyr CP118825.1 tRNAscan-SE exon 891663 891746 . + . ID=exon-PYH62_04485-1;Parent=rna-PYH62_04485;anticodon=(pos:891697..891699);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04485;product=tRNA-Tyr CP118825.1 Genbank gene 891755 891828 . + . ID=gene-PYH62_04490;Name=PYH62_04490;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04490 CP118825.1 tRNAscan-SE tRNA 891755 891828 . + . ID=rna-PYH62_04490;Parent=gene-PYH62_04490;anticodon=(pos:891787..891789);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04490;product=tRNA-Trp CP118825.1 tRNAscan-SE exon 891755 891828 . + . ID=exon-PYH62_04490-1;Parent=rna-PYH62_04490;anticodon=(pos:891787..891789);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04490;product=tRNA-Trp CP118825.1 Genbank gene 891831 891903 . + . ID=gene-PYH62_04495;Name=PYH62_04495;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04495 CP118825.1 tRNAscan-SE tRNA 891831 891903 . + . ID=rna-PYH62_04495;Parent=gene-PYH62_04495;anticodon=(pos:891864..891866);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04495;product=tRNA-His CP118825.1 tRNAscan-SE exon 891831 891903 . + . ID=exon-PYH62_04495-1;Parent=rna-PYH62_04495;anticodon=(pos:891864..891866);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04495;product=tRNA-His CP118825.1 Genbank gene 891916 891987 . + . ID=gene-PYH62_04500;Name=PYH62_04500;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04500 CP118825.1 tRNAscan-SE tRNA 891916 891987 . + . ID=rna-PYH62_04500;Parent=gene-PYH62_04500;anticodon=(pos:891948..891950);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04500;product=tRNA-Gln CP118825.1 tRNAscan-SE exon 891916 891987 . + . ID=exon-PYH62_04500-1;Parent=rna-PYH62_04500;anticodon=(pos:891948..891950);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04500;product=tRNA-Gln CP118825.1 Genbank gene 891995 892068 . + . ID=gene-PYH62_04505;Name=PYH62_04505;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04505 CP118825.1 tRNAscan-SE tRNA 891995 892068 . + . ID=rna-PYH62_04505;Parent=gene-PYH62_04505;anticodon=(pos:892027..892029);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04505;product=tRNA-Cys CP118825.1 tRNAscan-SE exon 891995 892068 . + . ID=exon-PYH62_04505-1;Parent=rna-PYH62_04505;anticodon=(pos:892027..892029);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04505;product=tRNA-Cys CP118825.1 Genbank gene 892077 892150 . + . ID=gene-PYH62_04510;Name=PYH62_04510;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04510 CP118825.1 tRNAscan-SE tRNA 892077 892150 . + . ID=rna-PYH62_04510;Parent=gene-PYH62_04510;anticodon=(pos:892109..892111);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04510;product=tRNA-Gly CP118825.1 tRNAscan-SE exon 892077 892150 . + . ID=exon-PYH62_04510-1;Parent=rna-PYH62_04510;anticodon=(pos:892109..892111);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04510;product=tRNA-Gly CP118825.1 Genbank gene 892165 892239 . + . ID=gene-PYH62_04515;Name=PYH62_04515;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04515 CP118825.1 tRNAscan-SE tRNA 892165 892239 . + . ID=rna-PYH62_04515;Parent=gene-PYH62_04515;anticodon=(pos:892198..892200);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04515;product=tRNA-Gly CP118825.1 tRNAscan-SE exon 892165 892239 . + . ID=exon-PYH62_04515-1;Parent=rna-PYH62_04515;anticodon=(pos:892198..892200);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04515;product=tRNA-Gly CP118825.1 Genbank gene 892370 892453 . + . ID=gene-PYH62_04520;Name=PYH62_04520;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04520 CP118825.1 tRNAscan-SE tRNA 892370 892453 . + . ID=rna-PYH62_04520;Parent=gene-PYH62_04520;anticodon=(pos:892404..892406);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04520;product=tRNA-Leu CP118825.1 tRNAscan-SE exon 892370 892453 . + . ID=exon-PYH62_04520-1;Parent=rna-PYH62_04520;anticodon=(pos:892404..892406);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04520;product=tRNA-Leu CP118825.1 Genbank gene 892593 893651 . + . ID=gene-PYH62_04525;Name=PYH62_04525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04525 CP118825.1 Protein Homology CDS 892593 893651 . + 0 ID=cds-WHI80031.1;Parent=gene-PYH62_04525;Dbxref=NCBI_GP:WHI80031.1;Name=WHI80031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449624.1;locus_tag=PYH62_04525;product=PTS transporter subunit IIC;protein_id=WHI80031.1;transl_table=11 CP118825.1 Genbank gene 893772 895226 . + . ID=gene-PYH62_04530;Name=PYH62_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04530 CP118825.1 Protein Homology CDS 893772 895226 . + 0 ID=cds-WHI80032.1;Parent=gene-PYH62_04530;Dbxref=NCBI_GP:WHI80032.1;Name=WHI80032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000649900.1;locus_tag=PYH62_04530;product=ABC transporter substrate-binding protein/permease;protein_id=WHI80032.1;transl_table=11 CP118825.1 Genbank gene 895219 895941 . + . ID=gene-PYH62_04535;Name=PYH62_04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04535 CP118825.1 Protein Homology CDS 895219 895941 . + 0 ID=cds-WHI80033.1;Parent=gene-PYH62_04535;Dbxref=NCBI_GP:WHI80033.1;Name=WHI80033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638026.1;locus_tag=PYH62_04535;product=amino acid ABC transporter ATP-binding protein;protein_id=WHI80033.1;transl_table=11 CP118825.1 Genbank gene 896203 897324 . + . ID=gene-PYH62_04540;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=PYH62_04540 CP118825.1 Protein Homology CDS 896203 897324 . + 0 ID=cds-WHI80034.1;Parent=gene-PYH62_04540;Dbxref=NCBI_GP:WHI80034.1;Name=WHI80034.1;Ontology_term=GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835688.1;locus_tag=PYH62_04540;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WHI80034.1;transl_table=11 CP118825.1 Genbank gene 897327 897797 . + . ID=gene-PYH62_04545;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=PYH62_04545 CP118825.1 Protein Homology CDS 897327 897797 . + 0 ID=cds-WHI80035.1;Parent=gene-PYH62_04545;Dbxref=NCBI_GP:WHI80035.1;Name=WHI80035.1;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455146.1;locus_tag=PYH62_04545;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WHI80035.1;transl_table=11 CP118825.1 Genbank gene 897957 898556 . + . ID=gene-PYH62_04550;Name=PYH62_04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04550 CP118825.1 Protein Homology CDS 897957 898556 . + 0 ID=cds-WHI80036.1;Parent=gene-PYH62_04550;Dbxref=NCBI_GP:WHI80036.1;Name=WHI80036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020808097.1;locus_tag=PYH62_04550;product=glucosamine-6-phosphate isomerase;protein_id=WHI80036.1;transl_table=11 CP118825.1 Genbank gene 898579 898752 . + . ID=gene-PYH62_04555;Name=PYH62_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04555 CP118825.1 Protein Homology CDS 898579 898752 . + 0 ID=cds-WHI80239.1;Parent=gene-PYH62_04555;Dbxref=NCBI_GP:WHI80239.1;Name=WHI80239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466824.1;locus_tag=PYH62_04555;product=SAS053 family protein;protein_id=WHI80239.1;transl_table=11 CP118825.1 Genbank gene 898863 899255 . + . ID=gene-PYH62_04560;Name=PYH62_04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04560 CP118825.1 Protein Homology CDS 898863 899255 . + 0 ID=cds-WHI80037.1;Parent=gene-PYH62_04560;Dbxref=NCBI_GP:WHI80037.1;Name=WHI80037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449658.1;locus_tag=PYH62_04560;product=hypothetical protein;protein_id=WHI80037.1;transl_table=11 CP118825.1 Genbank gene 899395 900780 . + . ID=gene-PYH62_04565;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=PYH62_04565 CP118825.1 Protein Homology CDS 899395 900780 . + 0 ID=cds-WHI80038.1;Parent=gene-PYH62_04565;Dbxref=NCBI_GP:WHI80038.1;Name=WHI80038.1;Ontology_term=GO:0006099,GO:0004333;gbkey=CDS;gene=fumC;go_function=fumarate hydratase activity|0004333||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000116229.1;locus_tag=PYH62_04565;product=class II fumarate hydratase;protein_id=WHI80038.1;transl_table=11 CP118825.1 Genbank gene 900859 901683 . - . ID=gene-PYH62_04570;Name=PYH62_04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04570 CP118825.1 Protein Homology CDS 900859 901683 . - 0 ID=cds-WHI80039.1;Parent=gene-PYH62_04570;Dbxref=NCBI_GP:WHI80039.1;Name=WHI80039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501168.1;locus_tag=PYH62_04570;product=RluA family pseudouridine synthase;protein_id=WHI80039.1;transl_table=11 CP118825.1 Genbank gene 901821 902930 . + . ID=gene-PYH62_04575;Name=PYH62_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04575 CP118825.1 Protein Homology CDS 901821 902930 . + 0 ID=cds-WHI80040.1;Parent=gene-PYH62_04575;Dbxref=NCBI_GP:WHI80040.1;Name=WHI80040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488425.1;locus_tag=PYH62_04575;product=GAF domain-containing sensor histidine kinase;protein_id=WHI80040.1;transl_table=11 CP118825.1 Genbank gene 902945 903568 . + . ID=gene-PYH62_04580;Name=PYH62_04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04580 CP118825.1 Protein Homology CDS 902945 903568 . + 0 ID=cds-WHI80041.1;Parent=gene-PYH62_04580;Dbxref=NCBI_GP:WHI80041.1;Name=WHI80041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002443556.1;locus_tag=PYH62_04580;product=response regulator transcription factor;protein_id=WHI80041.1;transl_table=11 CP118825.1 Genbank gene 903818 904282 . + . ID=gene-PYH62_04585;Name=PYH62_04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04585 CP118825.1 Protein Homology CDS 903818 904282 . + 0 ID=cds-WHI80042.1;Parent=gene-PYH62_04585;Dbxref=NCBI_GP:WHI80042.1;Name=WHI80042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500476.1;locus_tag=PYH62_04585;product=helix-turn-helix transcriptional regulator;protein_id=WHI80042.1;transl_table=11 CP118825.1 Genbank gene 904503 905633 . + . ID=gene-PYH62_04590;Name=PYH62_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04590 CP118825.1 Protein Homology CDS 904503 905633 . + 0 ID=cds-WHI80043.1;Parent=gene-PYH62_04590;Dbxref=NCBI_GP:WHI80043.1;Name=WHI80043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275417.1;locus_tag=PYH62_04590;product=DUF445 family protein;protein_id=WHI80043.1;transl_table=11 CP118825.1 Genbank gene 905705 906049 . + . ID=gene-PYH62_04595;Name=PYH62_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04595 CP118825.1 Protein Homology CDS 905705 906049 . + 0 ID=cds-WHI80044.1;Parent=gene-PYH62_04595;Dbxref=NCBI_GP:WHI80044.1;Name=WHI80044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498160.1;locus_tag=PYH62_04595;product=YlbF/YmcA family competence regulator;protein_id=WHI80044.1;transl_table=11 CP118825.1 Genbank gene 906200 907396 . + . ID=gene-PYH62_04600;Name=PYH62_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04600 CP118825.1 Protein Homology CDS 906200 907396 . + 0 ID=cds-WHI80045.1;Parent=gene-PYH62_04600;Dbxref=NCBI_GP:WHI80045.1;Name=WHI80045.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176391.1;locus_tag=PYH62_04600;product=metallophosphoesterase;protein_id=WHI80045.1;transl_table=11 CP118825.1 Genbank gene 907386 910322 . + . ID=gene-PYH62_04605;Name=PYH62_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04605 CP118825.1 Protein Homology CDS 907386 910322 . + 0 ID=cds-WHI80046.1;Parent=gene-PYH62_04605;Dbxref=NCBI_GP:WHI80046.1;Name=WHI80046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001836286.1;locus_tag=PYH62_04605;product=AAA family ATPase;protein_id=WHI80046.1;transl_table=11 CP118825.1 Genbank gene 910319 911260 . + . ID=gene-PYH62_04610;Name=yhaM;gbkey=Gene;gene=yhaM;gene_biotype=protein_coding;locus_tag=PYH62_04610 CP118825.1 Protein Homology CDS 910319 911260 . + 0 ID=cds-WHI80047.1;Parent=gene-PYH62_04610;Dbxref=NCBI_GP:WHI80047.1;Name=WHI80047.1;gbkey=CDS;gene=yhaM;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500470.1;locus_tag=PYH62_04610;product=3'-5' exoribonuclease YhaM;protein_id=WHI80047.1;transl_table=11 CP118825.1 Genbank gene 911319 912278 . - . ID=gene-PYH62_04615;Name=PYH62_04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04615 CP118825.1 Protein Homology CDS 911319 912278 . - 0 ID=cds-WHI80048.1;Parent=gene-PYH62_04615;Dbxref=NCBI_GP:WHI80048.1;Name=WHI80048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449639.1;locus_tag=PYH62_04615;product=peptidylprolyl isomerase;protein_id=WHI80048.1;transl_table=11 CP118825.1 Genbank gene 912503 913060 . - . ID=gene-PYH62_04620;Name=PYH62_04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04620 CP118825.1 Protein Homology CDS 912503 913060 . - 0 ID=cds-WHI80049.1;Parent=gene-PYH62_04620;Dbxref=NCBI_GP:WHI80049.1;Name=WHI80049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176387.1;locus_tag=PYH62_04620;product=DUF3267 domain-containing protein;protein_id=WHI80049.1;transl_table=11 CP118825.1 Genbank gene 913260 913643 . - . ID=gene-PYH62_04625;Name=PYH62_04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04625 CP118825.1 Protein Homology CDS 913260 913643 . - 0 ID=cds-WHI80050.1;Parent=gene-PYH62_04625;Dbxref=NCBI_GP:WHI80050.1;Name=WHI80050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449632.1;locus_tag=PYH62_04625;product=YtxH domain-containing protein;protein_id=WHI80050.1;transl_table=11 CP118825.1 Genbank gene 913796 914221 . - . ID=gene-PYH62_04630;Name=PYH62_04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04630 CP118825.1 Protein Homology CDS 913796 914221 . - 0 ID=cds-WHI80051.1;Parent=gene-PYH62_04630;Dbxref=NCBI_GP:WHI80051.1;Name=WHI80051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176386.1;locus_tag=PYH62_04630;product=HIT family protein;protein_id=WHI80051.1;transl_table=11 CP118825.1 Genbank gene 914356 915093 . + . ID=gene-PYH62_04635;Name=PYH62_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04635 CP118825.1 Protein Homology CDS 914356 915093 . + 0 ID=cds-WHI80052.1;Parent=gene-PYH62_04635;Dbxref=NCBI_GP:WHI80052.1;Name=WHI80052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455156.1;locus_tag=PYH62_04635;product=ABC transporter ATP-binding protein;protein_id=WHI80052.1;transl_table=11 CP118825.1 Genbank gene 915090 916313 . + . ID=gene-PYH62_04640;Name=PYH62_04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04640 CP118825.1 Protein Homology CDS 915090 916313 . + 0 ID=cds-WHI80053.1;Parent=gene-PYH62_04640;Dbxref=NCBI_GP:WHI80053.1;Name=WHI80053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363845.1;locus_tag=PYH62_04640;product=ABC transporter permease;protein_id=WHI80053.1;transl_table=11 CP118825.1 Genbank gene 916369 916869 . - . ID=gene-PYH62_04645;Name=PYH62_04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04645 CP118825.1 Protein Homology CDS 916369 916869 . - 0 ID=cds-WHI80054.1;Parent=gene-PYH62_04645;Dbxref=NCBI_GP:WHI80054.1;Name=WHI80054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455158.1;locus_tag=PYH62_04645;product=signal transduction protein TRAP;protein_id=WHI80054.1;transl_table=11 CP118825.1 Genbank gene 917117 918154 . + . ID=gene-PYH62_04650;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=PYH62_04650 CP118825.1 Protein Homology CDS 917117 918154 . + 0 ID=cds-WHI80055.1;Parent=gene-PYH62_04650;Dbxref=NCBI_GP:WHI80055.1;Name=WHI80055.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500461.1;locus_tag=PYH62_04650;product=uroporphyrinogen decarboxylase;protein_id=WHI80055.1;transl_table=11 CP118825.1 Genbank gene 918200 919123 . + . ID=gene-PYH62_04655;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=PYH62_04655 CP118825.1 Protein Homology CDS 918200 919123 . + 0 ID=cds-WHI80056.1;Parent=gene-PYH62_04655;Dbxref=NCBI_GP:WHI80056.1;Name=WHI80056.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500460.1;locus_tag=PYH62_04655;product=ferrochelatase;protein_id=WHI80056.1;transl_table=11 CP118825.1 Genbank gene 919141 920535 . + . ID=gene-PYH62_04660;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=PYH62_04660 CP118825.1 Protein Homology CDS 919141 920535 . + 0 ID=cds-WHI80057.1;Parent=gene-PYH62_04660;Dbxref=NCBI_GP:WHI80057.1;Name=WHI80057.1;Ontology_term=GO:0006779,GO:0004729;gbkey=CDS;gene=hemY;go_function=oxygen-dependent protoporphyrinogen oxidase activity|0004729||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500459.1;locus_tag=PYH62_04660;product=protoporphyrinogen oxidase;protein_id=WHI80057.1;transl_table=11 CP118825.1 Genbank gene 920640 921200 . + . ID=gene-PYH62_04665;Name=PYH62_04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04665 CP118825.1 Protein Homology CDS 920640 921200 . + 0 ID=cds-WHI80058.1;Parent=gene-PYH62_04665;Dbxref=NCBI_GP:WHI80058.1;Name=WHI80058.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000132896.1;locus_tag=PYH62_04665;product=alpha/beta hydrolase;protein_id=WHI80058.1;transl_table=11 CP118825.1 Genbank gene 921525 921598 . + . ID=gene-PYH62_04670;Name=PYH62_04670;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04670 CP118825.1 tRNAscan-SE tRNA 921525 921598 . + . ID=rna-PYH62_04670;Parent=gene-PYH62_04670;anticodon=(pos:921559..921561);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04670;product=tRNA-Met CP118825.1 tRNAscan-SE exon 921525 921598 . + . ID=exon-PYH62_04670-1;Parent=rna-PYH62_04670;anticodon=(pos:921559..921561);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04670;product=tRNA-Met CP118825.1 Genbank gene 921613 921688 . + . ID=gene-PYH62_04675;Name=PYH62_04675;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04675 CP118825.1 tRNAscan-SE tRNA 921613 921688 . + . ID=rna-PYH62_04675;Parent=gene-PYH62_04675;anticodon=(pos:921646..921648);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04675;product=tRNA-Asp CP118825.1 tRNAscan-SE exon 921613 921688 . + . ID=exon-PYH62_04675-1;Parent=rna-PYH62_04675;anticodon=(pos:921646..921648);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04675;product=tRNA-Asp CP118825.1 Genbank gene 921710 921782 . + . ID=gene-PYH62_04680;Name=PYH62_04680;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04680 CP118825.1 tRNAscan-SE tRNA 921710 921782 . + . ID=rna-PYH62_04680;Parent=gene-PYH62_04680;anticodon=(pos:921743..921745);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04680;product=tRNA-Phe CP118825.1 tRNAscan-SE exon 921710 921782 . + . ID=exon-PYH62_04680-1;Parent=rna-PYH62_04680;anticodon=(pos:921743..921745);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04680;product=tRNA-Phe CP118825.1 Genbank gene 921794 921869 . + . ID=gene-PYH62_04685;Name=PYH62_04685;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04685 CP118825.1 tRNAscan-SE tRNA 921794 921869 . + . ID=rna-PYH62_04685;Parent=gene-PYH62_04685;anticodon=(pos:921827..921829);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04685;product=tRNA-His CP118825.1 tRNAscan-SE exon 921794 921869 . + . ID=exon-PYH62_04685-1;Parent=rna-PYH62_04685;anticodon=(pos:921827..921829);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04685;product=tRNA-His CP118825.1 Genbank gene 921883 921956 . + . ID=gene-PYH62_04690;Name=PYH62_04690;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04690 CP118825.1 tRNAscan-SE tRNA 921883 921956 . + . ID=rna-PYH62_04690;Parent=gene-PYH62_04690;anticodon=(pos:921915..921917);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04690;product=tRNA-Gly CP118825.1 tRNAscan-SE exon 921883 921956 . + . ID=exon-PYH62_04690-1;Parent=rna-PYH62_04690;anticodon=(pos:921915..921917);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04690;product=tRNA-Gly CP118825.1 Genbank gene 921969 922043 . + . ID=gene-PYH62_04695;Name=PYH62_04695;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04695 CP118825.1 tRNAscan-SE tRNA 921969 922043 . + . ID=rna-PYH62_04695;Parent=gene-PYH62_04695;anticodon=(pos:922001..922003);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04695;product=tRNA-Asn CP118825.1 tRNAscan-SE exon 921969 922043 . + . ID=exon-PYH62_04695-1;Parent=rna-PYH62_04695;anticodon=(pos:922001..922003);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04695;product=tRNA-Asn CP118825.1 Genbank gene 922045 922116 . + . ID=gene-PYH62_04700;Name=PYH62_04700;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04700 CP118825.1 tRNAscan-SE tRNA 922045 922116 . + . ID=rna-PYH62_04700;Parent=gene-PYH62_04700;anticodon=(pos:922078..922080);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04700;product=tRNA-Glu CP118825.1 tRNAscan-SE exon 922045 922116 . + . ID=exon-PYH62_04700-1;Parent=rna-PYH62_04700;anticodon=(pos:922078..922080);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04700;product=tRNA-Glu CP118825.1 Genbank gene 922167 922257 . + . ID=gene-PYH62_04705;Name=PYH62_04705;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_04705 CP118825.1 tRNAscan-SE tRNA 922167 922257 . + . ID=rna-PYH62_04705;Parent=gene-PYH62_04705;anticodon=(pos:922203..922205);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04705;product=tRNA-Ser CP118825.1 tRNAscan-SE exon 922167 922257 . + . ID=exon-PYH62_04705-1;Parent=rna-PYH62_04705;anticodon=(pos:922203..922205);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_04705;product=tRNA-Ser CP118825.1 Genbank gene 922457 923851 . + . ID=gene-PYH62_04710;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=PYH62_04710 CP118825.1 Protein Homology CDS 922457 923851 . + 0 ID=cds-WHI80059.1;Parent=gene-PYH62_04710;Dbxref=NCBI_GP:WHI80059.1;Name=WHI80059.1;Ontology_term=GO:0009234,GO:0008756;gbkey=CDS;gene=menE;go_function=o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488441.1;locus_tag=PYH62_04710;product=o-succinylbenzoate--CoA ligase;protein_id=WHI80059.1;transl_table=11 CP118825.1 Genbank gene 923852 924859 . + . ID=gene-PYH62_04715;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=PYH62_04715 CP118825.1 Protein Homology CDS 923852 924859 . + 0 ID=cds-WHI80060.1;Parent=gene-PYH62_04715;Dbxref=NCBI_GP:WHI80060.1;Name=WHI80060.1;Ontology_term=GO:0009234,GO:0016836;gbkey=CDS;gene=menC;go_function=hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488433.1;locus_tag=PYH62_04715;product=o-succinylbenzoate synthase;protein_id=WHI80060.1;transl_table=11 CP118825.1 Genbank gene 924850 925095 . - . ID=gene-PYH62_04720;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=PYH62_04720 CP118825.1 Protein Homology CDS 924850 925095 . - 0 ID=cds-WHI80061.1;Parent=gene-PYH62_04720;Dbxref=NCBI_GP:WHI80061.1;Name=WHI80061.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449651.1;locus_tag=PYH62_04720;product=membrane protein insertion efficiency factor YidD;protein_id=WHI80061.1;transl_table=11 CP118825.1 Genbank gene 925163 925636 . + . ID=gene-PYH62_04725;Name=ytkD;gbkey=Gene;gene=ytkD;gene_biotype=protein_coding;locus_tag=PYH62_04725 CP118825.1 Protein Homology CDS 925163 925636 . + 0 ID=cds-WHI80062.1;Parent=gene-PYH62_04725;Dbxref=NCBI_GP:WHI80062.1;Name=WHI80062.1;Ontology_term=GO:0006139,GO:0017111;gbkey=CDS;gene=ytkD;go_function=ribonucleoside triphosphate phosphatase activity|0017111||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449666.1;locus_tag=PYH62_04725;product=nucleoside triphosphatase YtkD;protein_id=WHI80062.1;transl_table=11 CP118825.1 Genbank gene 925641 926396 . + . ID=gene-PYH62_04730;Name=PYH62_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04730 CP118825.1 Protein Homology CDS 925641 926396 . + 0 ID=cds-WHI80240.1;Parent=gene-PYH62_04730;Dbxref=NCBI_GP:WHI80240.1;Name=WHI80240.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176374.1;locus_tag=PYH62_04730;product=prolyl oligopeptidase family serine peptidase;protein_id=WHI80240.1;transl_table=11 CP118825.1 Genbank gene 926438 928030 . - . ID=gene-PYH62_04735;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=PYH62_04735 CP118825.1 Protein Homology CDS 926438 928030 . - 0 ID=cds-WHI80063.1;Parent=gene-PYH62_04735;Dbxref=NCBI_GP:WHI80063.1;Name=WHI80063.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176373.1;locus_tag=PYH62_04735;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WHI80063.1;transl_table=11 CP118825.1 cmsearch riboswitch 928188 928300 . + . ID=id-CP118825.1:928188..928300;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch CP118825.1 Genbank gene 928415 929611 . + . ID=gene-PYH62_04740;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=PYH62_04740 CP118825.1 Protein Homology CDS 928415 929611 . + 0 ID=cds-WHI80064.1;Parent=gene-PYH62_04740;Dbxref=NCBI_GP:WHI80064.1;Name=WHI80064.1;Ontology_term=GO:0006556,GO:0004478;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176372.1;locus_tag=PYH62_04740;product=methionine adenosyltransferase;protein_id=WHI80064.1;transl_table=11 CP118825.1 Genbank gene 929710 930621 . + . ID=gene-PYH62_04745;Name=PYH62_04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04745 CP118825.1 Protein Homology CDS 929710 930621 . + 0 ID=cds-WHI80065.1;Parent=gene-PYH62_04745;Dbxref=NCBI_GP:WHI80065.1;Name=WHI80065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468818.1;locus_tag=PYH62_04745;product=NERD domain-containing protein;protein_id=WHI80065.1;transl_table=11 CP118825.1 Genbank gene 930736 931572 . + . ID=gene-PYH62_04750;Name=PYH62_04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04750 CP118825.1 Protein Homology CDS 930736 931572 . + 0 ID=cds-WHI80066.1;Parent=gene-PYH62_04750;Dbxref=NCBI_GP:WHI80066.1;Name=WHI80066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002466227.1;locus_tag=PYH62_04750;product=aldo/keto reductase;protein_id=WHI80066.1;transl_table=11 CP118825.1 Genbank gene 931630 931983 . - . ID=gene-PYH62_04755;Name=PYH62_04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04755 CP118825.1 Protein Homology CDS 931630 931983 . - 0 ID=cds-WHI80067.1;Parent=gene-PYH62_04755;Dbxref=NCBI_GP:WHI80067.1;Name=WHI80067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275443.1;locus_tag=PYH62_04755;product=CrcB family protein;protein_id=WHI80067.1;transl_table=11 CP118825.1 Genbank gene 931980 932345 . - . ID=gene-PYH62_04760;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=PYH62_04760 CP118825.1 Protein Homology CDS 931980 932345 . - 0 ID=cds-WHI80068.1;Parent=gene-PYH62_04760;Dbxref=NCBI_GP:WHI80068.1;Name=WHI80068.1;gbkey=CDS;gene=crcB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500680.1;locus_tag=PYH62_04760;product=fluoride efflux transporter CrcB;protein_id=WHI80068.1;transl_table=11 CP118825.1 Genbank gene 932385 932693 . - . ID=gene-PYH62_04765;Name=PYH62_04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04765 CP118825.1 Protein Homology CDS 932385 932693 . - 0 ID=cds-WHI80069.1;Parent=gene-PYH62_04765;Dbxref=NCBI_GP:WHI80069.1;Name=WHI80069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176367.1;locus_tag=PYH62_04765;product=hypothetical protein;protein_id=WHI80069.1;transl_table=11 CP118825.1 Genbank gene 932940 933653 . + . ID=gene-PYH62_04770;Name=PYH62_04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04770 CP118825.1 Protein Homology CDS 932940 933653 . + 0 ID=cds-WHI80070.1;Parent=gene-PYH62_04770;Dbxref=NCBI_GP:WHI80070.1;Name=WHI80070.1;Ontology_term=GO:0006098,GO:0004801;gbkey=CDS;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500402.1;locus_tag=PYH62_04770;product=transaldolase;protein_id=WHI80070.1;transl_table=11 CP118825.1 Genbank gene 933851 934315 . + . ID=gene-PYH62_04775;Name=PYH62_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04775 CP118825.1 Protein Homology CDS 933851 934315 . + 0 ID=cds-WHI80071.1;Parent=gene-PYH62_04775;Dbxref=NCBI_GP:WHI80071.1;Name=WHI80071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176365.1;locus_tag=PYH62_04775;product=hypothetical protein;protein_id=WHI80071.1;transl_table=11 CP118825.1 Genbank gene 934290 934736 . - . ID=gene-PYH62_04780;Name=PYH62_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04780 CP118825.1 Protein Homology CDS 934290 934736 . - 0 ID=cds-WHI80072.1;Parent=gene-PYH62_04780;Dbxref=NCBI_GP:WHI80072.1;Name=WHI80072.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176364.1;locus_tag=PYH62_04780;product=competence protein ComK;protein_id=WHI80072.1;transl_table=11 CP118825.1 Genbank gene 934723 935169 . - . ID=gene-PYH62_04785;Name=PYH62_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04785 CP118825.1 Protein Homology CDS 934723 935169 . - 0 ID=cds-WHI80073.1;Parent=gene-PYH62_04785;Dbxref=NCBI_GP:WHI80073.1;Name=WHI80073.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275449.1;locus_tag=PYH62_04785;product=sigma factor;protein_id=WHI80073.1;transl_table=11 CP118825.1 Genbank gene 935417 935641 . + . ID=gene-PYH62_04790;Name=PYH62_04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04790 CP118825.1 Protein Homology CDS 935417 935641 . + 0 ID=cds-WHI80074.1;Parent=gene-PYH62_04790;Dbxref=NCBI_GP:WHI80074.1;Name=WHI80074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500397.1;locus_tag=PYH62_04790;product=hypothetical protein;protein_id=WHI80074.1;transl_table=11 CP118825.1 Genbank gene 935888 936736 . + . ID=gene-PYH62_04795;Name=PYH62_04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04795 CP118825.1 Protein Homology CDS 935888 936736 . + 0 ID=cds-WHI80075.1;Parent=gene-PYH62_04795;Dbxref=NCBI_GP:WHI80075.1;Name=WHI80075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176362.1;locus_tag=PYH62_04795;product=N-acetylglucosaminidase;protein_id=WHI80075.1;transl_table=11 CP118825.1 Genbank gene 937032 938519 . + . ID=gene-PYH62_04800;Name=PYH62_04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04800 CP118825.1 Protein Homology CDS 937032 938519 . + 0 ID=cds-WHI80076.1;Parent=gene-PYH62_04800;Dbxref=NCBI_GP:WHI80076.1;Name=WHI80076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176361.1;locus_tag=PYH62_04800;product=FAD/NAD(P)-binding protein;protein_id=WHI80076.1;transl_table=11 CP118825.1 cmsearch riboswitch 938670 938805 . + . ID=id-CP118825.1:938670..938805;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch CP118825.1 Genbank gene 938927 939970 . + . ID=gene-PYH62_04805;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=PYH62_04805 CP118825.1 Protein Homology CDS 938927 939970 . + 0 ID=cds-WHI80077.1;Parent=gene-PYH62_04805;Dbxref=NCBI_GP:WHI80077.1;Name=WHI80077.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474980.1;locus_tag=PYH62_04805;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WHI80077.1;transl_table=11 CP118825.1 Genbank gene 939977 940609 . + . ID=gene-PYH62_04810;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=PYH62_04810 CP118825.1 Protein Homology CDS 939977 940609 . + 0 ID=cds-WHI80078.1;Parent=gene-PYH62_04810;Dbxref=NCBI_GP:WHI80078.1;Name=WHI80078.1;Ontology_term=GO:0004746;gbkey=CDS;gene=ribE;go_function=riboflavin synthase activity|0004746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467848.1;locus_tag=PYH62_04810;product=riboflavin synthase;protein_id=WHI80078.1;transl_table=11 CP118825.1 Genbank gene 940621 941805 . + . ID=gene-PYH62_04815;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=PYH62_04815 CP118825.1 Protein Homology CDS 940621 941805 . + 0 ID=cds-WHI80079.1;Parent=gene-PYH62_04815;Dbxref=NCBI_GP:WHI80079.1;Name=WHI80079.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500389.1;locus_tag=PYH62_04815;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WHI80079.1;transl_table=11 CP118825.1 Genbank gene 941818 942276 . + . ID=gene-PYH62_04820;Name=ribE;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=PYH62_04820 CP118825.1 Protein Homology CDS 941818 942276 . + 0 ID=cds-WHI80080.1;Parent=gene-PYH62_04820;Dbxref=NCBI_GP:WHI80080.1;Name=WHI80080.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribE;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275457.1;locus_tag=PYH62_04820;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WHI80080.1;transl_table=11 CP118825.1 Genbank gene 942328 943329 . - . ID=gene-PYH62_04825;Name=PYH62_04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04825 CP118825.1 Protein Homology CDS 942328 943329 . - 0 ID=cds-WHI80081.1;Parent=gene-PYH62_04825;Dbxref=NCBI_GP:WHI80081.1;Name=WHI80081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020807986.1;locus_tag=PYH62_04825;product=proline dehydrogenase;protein_id=WHI80081.1;transl_table=11 CP118825.1 Genbank gene 943538 944365 . + . ID=gene-PYH62_04830;Name=PYH62_04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04830 CP118825.1 Protein Homology CDS 943538 944365 . + 0 ID=cds-WHI80082.1;Parent=gene-PYH62_04830;Dbxref=NCBI_GP:WHI80082.1;Name=WHI80082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361899.1;locus_tag=PYH62_04830;product=alpha/beta hydrolase;protein_id=WHI80082.1;transl_table=11 CP118825.1 Genbank gene 944655 945062 . + . ID=gene-PYH62_04835;Name=PYH62_04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04835 CP118825.1 Protein Homology CDS 944655 945062 . + 0 ID=cds-WHI80083.1;Parent=gene-PYH62_04835;Dbxref=NCBI_GP:WHI80083.1;Name=WHI80083.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458809.1;locus_tag=PYH62_04835;product=MarR family transcriptional regulator;protein_id=WHI80083.1;transl_table=11 CP118825.1 Genbank gene 945123 945683 . - . ID=gene-PYH62_04840;Name=PYH62_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04840 CP118825.1 Protein Homology CDS 945123 945683 . - 0 ID=cds-WHI80084.1;Parent=gene-PYH62_04840;Dbxref=NCBI_GP:WHI80084.1;Name=WHI80084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176355.1;locus_tag=PYH62_04840;product=class I SAM-dependent methyltransferase;protein_id=WHI80084.1;transl_table=11 CP118825.1 Genbank gene 945680 946639 . - . ID=gene-PYH62_04845;Name=PYH62_04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04845 CP118825.1 Protein Homology CDS 945680 946639 . - 0 ID=cds-WHI80085.1;Parent=gene-PYH62_04845;Dbxref=NCBI_GP:WHI80085.1;Name=WHI80085.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176354.1;locus_tag=PYH62_04845;product=TIGR01212 family radical SAM protein;protein_id=WHI80085.1;transl_table=11 CP118825.1 Genbank gene 946751 947935 . + . ID=gene-PYH62_04850;Name=PYH62_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04850 CP118825.1 Protein Homology CDS 946751 947935 . + 0 ID=cds-WHI80086.1;Parent=gene-PYH62_04850;Dbxref=NCBI_GP:WHI80086.1;Name=WHI80086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449671.1;locus_tag=PYH62_04850;product=MFS transporter;protein_id=WHI80086.1;transl_table=11 CP118825.1 cmsearch binding_site 948002 948192 . + . ID=id-CP118825.1:948002..948192;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.4 CP118825.1 Genbank gene 948240 950654 . + . ID=gene-PYH62_04855;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=PYH62_04855 CP118825.1 Protein Homology CDS 948240 950654 . + 0 ID=cds-WHI80087.1;Parent=gene-PYH62_04855;Dbxref=NCBI_GP:WHI80087.1;Name=WHI80087.1;Ontology_term=GO:0006429,GO:0004823,GO:0005737;gbkey=CDS;gene=leuS;go_component=cytoplasm|0005737||IEA;go_function=leucine-tRNA ligase activity|0004823||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019235960.1;locus_tag=PYH62_04855;product=leucine--tRNA ligase;protein_id=WHI80087.1;transl_table=11 CP118825.1 Genbank gene 950673 950984 . + . ID=gene-PYH62_04860;Name=PYH62_04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04860 CP118825.1 Protein Homology CDS 950673 950984 . + 0 ID=cds-WHI80088.1;Parent=gene-PYH62_04860;Dbxref=NCBI_GP:WHI80088.1;Name=WHI80088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464567.1;locus_tag=PYH62_04860;product=rhodanese-like domain-containing protein;protein_id=WHI80088.1;transl_table=11 CP118825.1 Genbank gene 951230 954478 . + . ID=gene-PYH62_04865;Name=PYH62_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04865 CP118825.1 Protein Homology CDS 951230 954478 . + 0 ID=cds-WHI80089.1;Parent=gene-PYH62_04865;Dbxref=NCBI_GP:WHI80089.1;Name=WHI80089.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR04263.1;locus_tag=PYH62_04865;product=DUF1542 domain-containing protein;protein_id=WHI80089.1;transl_table=11 CP118825.1 Genbank gene 954459 954725 . + . ID=gene-PYH62_04870;Name=PYH62_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04870 CP118825.1 Protein Homology CDS 954459 954725 . + 0 ID=cds-WHI80090.1;Parent=gene-PYH62_04870;Dbxref=NCBI_GP:WHI80090.1;Name=WHI80090.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019202.2;locus_tag=PYH62_04870;product=DUF1542 domain-containing protein;protein_id=WHI80090.1;transl_table=11 CP118825.1 Genbank gene 954691 959025 . + . ID=gene-PYH62_04875;Name=PYH62_04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04875 CP118825.1 Protein Homology CDS 954691 959025 . + 0 ID=cds-WHI80091.1;Parent=gene-PYH62_04875;Dbxref=NCBI_GP:WHI80091.1;Name=WHI80091.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019202.2;locus_tag=PYH62_04875;product=DUF1542 domain-containing protein;protein_id=WHI80091.1;transl_table=11 CP118825.1 Genbank gene 959122 960378 . - . ID=gene-PYH62_04880;Name=PYH62_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04880 CP118825.1 Protein Homology CDS 959122 960378 . - 0 ID=cds-WHI80092.1;Parent=gene-PYH62_04880;Dbxref=NCBI_GP:WHI80092.1;Name=WHI80092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176349.1;locus_tag=PYH62_04880;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WHI80092.1;transl_table=11 CP118825.1 Genbank pseudogene 960655 962293 . + . ID=gene-PYH62_04885;Name=PYH62_04885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_04885;pseudo=true CP118825.1 Protein Homology CDS 960655 962293 . + 0 ID=cds-PYH62_04885;Parent=gene-PYH62_04885;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275469.1;locus_tag=PYH62_04885;product=polysaccharide biosynthesis protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 962290 962976 . + . ID=gene-PYH62_04890;Name=PYH62_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04890 CP118825.1 Protein Homology CDS 962290 962976 . + 0 ID=cds-WHI80093.1;Parent=gene-PYH62_04890;Dbxref=NCBI_GP:WHI80093.1;Name=WHI80093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449689.1;locus_tag=PYH62_04890;product=pseudouridine synthase;protein_id=WHI80093.1;transl_table=11 CP118825.1 Genbank pseudogene 963003 963435 . + . ID=gene-PYH62_04895;Name=PYH62_04895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_04895;pseudo=true CP118825.1 Protein Homology CDS 963003 963435 . + 0 ID=cds-PYH62_04895;Parent=gene-PYH62_04895;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488017.1;locus_tag=PYH62_04895;product=YtxH domain-containing protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 963579 964988 . + . ID=gene-PYH62_04900;Name=pepV;gbkey=Gene;gene=pepV;gene_biotype=protein_coding;locus_tag=PYH62_04900 CP118825.1 Protein Homology CDS 963579 964988 . + 0 ID=cds-WHI80094.1;Parent=gene-PYH62_04900;Dbxref=NCBI_GP:WHI80094.1;Name=WHI80094.1;Ontology_term=GO:0008270,GO:0016805;gbkey=CDS;gene=pepV;go_function=zinc ion binding|0008270||IEA,dipeptidase activity|0016805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488011.1;locus_tag=PYH62_04900;product=dipeptidase PepV;protein_id=WHI80094.1;transl_table=11 CP118825.1 Genbank pseudogene 964992 965844 . + . ID=gene-PYH62_04905;Name=dat;gbkey=Gene;gene=dat;gene_biotype=pseudogene;locus_tag=PYH62_04905;pseudo=true CP118825.1 Protein Homology CDS 964992 965844 . + 0 ID=cds-PYH62_04905;Parent=gene-PYH62_04905;Note=frameshifted;Ontology_term=GO:0019480,GO:0047810;gbkey=CDS;gene=dat;go_function=D-alanine:2-oxoglutarate aminotransferase activity|0047810||IEA;go_process=L-alanine oxidation to pyruvate via D-alanine|0019480||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835469.1;locus_tag=PYH62_04905;product=D-amino-acid transaminase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 966182 966973 . + . ID=gene-PYH62_04910;Name=PYH62_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04910 CP118825.1 Protein Homology CDS 966182 966973 . + 0 ID=cds-WHI80095.1;Parent=gene-PYH62_04910;Dbxref=NCBI_GP:WHI80095.1;Name=WHI80095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001602611.1;locus_tag=PYH62_04910;product=phosphotransferase family protein;protein_id=WHI80095.1;transl_table=11 CP118825.1 Genbank gene 966987 967628 . + . ID=gene-PYH62_04915;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=PYH62_04915 CP118825.1 Protein Homology CDS 966987 967628 . + 0 ID=cds-WHI80096.1;Parent=gene-PYH62_04915;Dbxref=NCBI_GP:WHI80096.1;Name=WHI80096.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine-N7-)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449690.1;locus_tag=PYH62_04915;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WHI80096.1;transl_table=11 CP118825.1 Genbank gene 967954 968127 . - . ID=gene-PYH62_04920;Name=PYH62_04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04920 CP118825.1 Protein Homology CDS 967954 968127 . - 0 ID=cds-WHI80097.1;Parent=gene-PYH62_04920;Dbxref=NCBI_GP:WHI80097.1;Name=WHI80097.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015378.2;locus_tag=PYH62_04920;product=PepSY domain-containing protein;protein_id=WHI80097.1;transl_table=11 CP118825.1 Genbank gene 968364 969446 . + . ID=gene-PYH62_04925;Name=PYH62_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04925 CP118825.1 Protein Homology CDS 968364 969446 . + 0 ID=cds-WHI80098.1;Parent=gene-PYH62_04925;Dbxref=NCBI_GP:WHI80098.1;Name=WHI80098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176345.1;locus_tag=PYH62_04925;product=M42 family metallopeptidase;protein_id=WHI80098.1;transl_table=11 CP118825.1 Genbank gene 969448 969759 . + . ID=gene-PYH62_04930;Name=PYH62_04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04930 CP118825.1 Protein Homology CDS 969448 969759 . + 0 ID=cds-WHI80099.1;Parent=gene-PYH62_04930;Dbxref=NCBI_GP:WHI80099.1;Name=WHI80099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500364.1;locus_tag=PYH62_04930;product=thioredoxin family protein;protein_id=WHI80099.1;transl_table=11 CP118825.1 Genbank gene 969876 970730 . + . ID=gene-PYH62_04935;Name=PYH62_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04935 CP118825.1 Protein Homology CDS 969876 970730 . + 0 ID=cds-WHI80100.1;Parent=gene-PYH62_04935;Dbxref=NCBI_GP:WHI80100.1;Name=WHI80100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176344.1;locus_tag=PYH62_04935;product=DUF1444 domain-containing protein;protein_id=WHI80100.1;transl_table=11 CP118825.1 Genbank gene 970759 971355 . + . ID=gene-PYH62_04940;Name=PYH62_04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04940 CP118825.1 Protein Homology CDS 970759 971355 . + 0 ID=cds-WHI80101.1;Parent=gene-PYH62_04940;Dbxref=NCBI_GP:WHI80101.1;Name=WHI80101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446696.1;locus_tag=PYH62_04940;product=DUF4479 domain-containing protein;protein_id=WHI80101.1;transl_table=11 CP118825.1 Genbank pseudogene 971380 974939 . + . ID=gene-PYH62_04945;Name=PYH62_04945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_04945;pseudo=true CP118825.1 Protein Homology CDS 971380 974939 . + 0 ID=cds-PYH62_04945;Parent=gene-PYH62_04945;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470393.1;locus_tag=PYH62_04945;product=DNA translocase FtsK;pseudo=true;transl_table=11 CP118825.1 Genbank gene 974961 976274 . + . ID=gene-PYH62_04950;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=PYH62_04950 CP118825.1 Protein Homology CDS 974961 976274 . + 0 ID=cds-WHI80102.1;Parent=gene-PYH62_04950;Dbxref=NCBI_GP:WHI80102.1;Name=WHI80102.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500360.1;locus_tag=PYH62_04950;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WHI80102.1;transl_table=11 CP118825.1 Genbank gene 976352 976849 . + . ID=gene-PYH62_04955;Name=PYH62_04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04955 CP118825.1 Protein Homology CDS 976352 976849 . + 0 ID=cds-WHI80103.1;Parent=gene-PYH62_04955;Dbxref=NCBI_GP:WHI80103.1;Name=WHI80103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275484.1;locus_tag=PYH62_04955;product=DUF948 domain-containing protein;protein_id=WHI80103.1;transl_table=11 CP118825.1 Genbank gene 976921 977964 . + . ID=gene-PYH62_04960;Name=PYH62_04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04960 CP118825.1 GeneMarkS-2+ CDS 976921 977964 . + 0 ID=cds-WHI80104.1;Parent=gene-PYH62_04960;Dbxref=NCBI_GP:WHI80104.1;Name=WHI80104.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_04960;product=YtxH domain-containing protein;protein_id=WHI80104.1;transl_table=11 CP118825.1 Genbank gene 977954 978979 . + . ID=gene-PYH62_04965;Name=PYH62_04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04965 CP118825.1 GeneMarkS-2+ CDS 977954 978979 . + 0 ID=cds-WHI80105.1;Parent=gene-PYH62_04965;Dbxref=NCBI_GP:WHI80105.1;Name=WHI80105.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_04965;product=hypothetical protein;protein_id=WHI80105.1;transl_table=11 CP118825.1 Genbank pseudogene 979201 980293 . + . ID=gene-PYH62_04970;Name=PYH62_04970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_04970;pseudo=true CP118825.1 Protein Homology CDS 979201 980293 . + 0 ID=cds-PYH62_04970;Parent=gene-PYH62_04970;Note=frameshifted;Ontology_term=GO:0009073,GO:0046417,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500356.1;locus_tag=PYH62_04970;product=bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 980556 981545 . + . ID=gene-PYH62_04975;Name=ccpA;gbkey=Gene;gene=ccpA;gene_biotype=protein_coding;locus_tag=PYH62_04975 CP118825.1 Protein Homology CDS 980556 981545 . + 0 ID=cds-WHI80106.1;Parent=gene-PYH62_04975;Dbxref=NCBI_GP:WHI80106.1;Name=WHI80106.1;Ontology_term=GO:0005975,GO:0006355,GO:0001228,GO:0003677;gbkey=CDS;gene=ccpA;go_function=DNA-binding transcription activator activity%2C RNA polymerase II-specific|0001228||IEA,DNA binding|0003677||IEA;go_process=carbohydrate metabolic process|0005975||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500354.1;locus_tag=PYH62_04975;product=catabolite control protein A;protein_id=WHI80106.1;transl_table=11 CP118825.1 Genbank gene 981832 983511 . + . ID=gene-PYH62_04980;Name=PYH62_04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04980 CP118825.1 Protein Homology CDS 981832 983511 . + 0 ID=cds-WHI80107.1;Parent=gene-PYH62_04980;Dbxref=NCBI_GP:WHI80107.1;Name=WHI80107.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830915.1;locus_tag=PYH62_04980;product=IS1182 family transposase;protein_id=WHI80107.1;transl_table=11 CP118825.1 Genbank gene 983708 985375 . + . ID=gene-PYH62_04985;Name=PYH62_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04985 CP118825.1 Protein Homology CDS 983708 985375 . + 0 ID=cds-WHI80108.1;Parent=gene-PYH62_04985;Dbxref=NCBI_GP:WHI80108.1;Name=WHI80108.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500350.1;locus_tag=PYH62_04985;product=formate--tetrahydrofolate ligase;protein_id=WHI80108.1;transl_table=11 CP118825.1 Genbank gene 985646 986533 . - . ID=gene-PYH62_04990;Name=PYH62_04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_04990 CP118825.1 Protein Homology CDS 985646 986533 . - 0 ID=cds-WHI80109.1;Parent=gene-PYH62_04990;Dbxref=NCBI_GP:WHI80109.1;Name=WHI80109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835461.1;locus_tag=PYH62_04990;product=transglycosylase domain-containing protein;protein_id=WHI80109.1;transl_table=11 CP118825.1 Genbank gene 986880 988142 . + . ID=gene-PYH62_04995;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=PYH62_04995 CP118825.1 Protein Homology CDS 986880 988142 . + 0 ID=cds-WHI80110.1;Parent=gene-PYH62_04995;Dbxref=NCBI_GP:WHI80110.1;Name=WHI80110.1;Ontology_term=GO:0006437,GO:0004831,GO:0005737;gbkey=CDS;gene=tyrS;go_component=cytoplasm|0005737||IEA;go_function=tyrosine-tRNA ligase activity|0004831||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500345.1;locus_tag=PYH62_04995;product=tyrosine--tRNA ligase;protein_id=WHI80110.1;transl_table=11 CP118825.1 Genbank gene 988209 989465 . - . ID=gene-PYH62_05000;Name=PYH62_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05000 CP118825.1 Protein Homology CDS 988209 989465 . - 0 ID=cds-WHI80111.1;Parent=gene-PYH62_05000;Dbxref=NCBI_GP:WHI80111.1;Name=WHI80111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448294.1;locus_tag=PYH62_05000;product=S1C family serine protease;protein_id=WHI80111.1;transl_table=11 CP118825.1 Genbank gene 989633 990250 . + . ID=gene-PYH62_05005;Name=PYH62_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05005 CP118825.1 Protein Homology CDS 989633 990250 . + 0 ID=cds-WHI80112.1;Parent=gene-PYH62_05005;Dbxref=NCBI_GP:WHI80112.1;Name=WHI80112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500343.1;locus_tag=PYH62_05005;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=WHI80112.1;transl_table=11 CP118825.1 Genbank gene 990719 992179 . + . ID=gene-PYH62_05010;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=PYH62_05010 CP118825.1 Protein Homology CDS 990719 992179 . + 0 ID=cds-WHI80113.1;Parent=gene-PYH62_05010;Dbxref=NCBI_GP:WHI80113.1;Name=WHI80113.1;Ontology_term=GO:0015572;gbkey=CDS;gene=nagE;go_function=N-acetylglucosamine transmembrane transporter activity|0015572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448296.1;locus_tag=PYH62_05010;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;protein_id=WHI80113.1;transl_table=11 CP118825.1 Genbank gene 992375 993502 . + . ID=gene-PYH62_05015;Name=PYH62_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05015 CP118825.1 Protein Homology CDS 992375 993502 . + 0 ID=cds-WHI80114.1;Parent=gene-PYH62_05015;Dbxref=NCBI_GP:WHI80114.1;Name=WHI80114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448292.1;locus_tag=PYH62_05015;product=HAD hydrolase-like protein;protein_id=WHI80114.1;transl_table=11 CP118825.1 Genbank pseudogene 993550 995146 . - . ID=gene-PYH62_05020;Name=serA;gbkey=Gene;gene=serA;gene_biotype=pseudogene;locus_tag=PYH62_05020;pseudo=true CP118825.1 Protein Homology CDS 993550 995146 . - 0 ID=cds-PYH62_05020;Parent=gene-PYH62_05020;Note=frameshifted;Ontology_term=GO:0006564,GO:0004617;gbkey=CDS;gene=serA;go_function=phosphoglycerate dehydrogenase activity|0004617||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505776.1;locus_tag=PYH62_05020;product=phosphoglycerate dehydrogenase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 995136 996299 . - . ID=gene-PYH62_05025;Name=PYH62_05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05025 CP118825.1 Protein Homology CDS 995136 996299 . - 0 ID=cds-WHI80115.1;Parent=gene-PYH62_05025;Dbxref=NCBI_GP:WHI80115.1;Name=WHI80115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502331.1;locus_tag=PYH62_05025;product=alanine--glyoxylate aminotransferase family protein;protein_id=WHI80115.1;transl_table=11 CP118825.1 Genbank gene 996403 996846 . - . ID=gene-PYH62_05030;Name=PYH62_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05030 CP118825.1 Protein Homology CDS 996403 996846 . - 0 ID=cds-WHI80116.1;Parent=gene-PYH62_05030;Dbxref=NCBI_GP:WHI80116.1;Name=WHI80116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176107.1;locus_tag=PYH62_05030;product=OsmC family protein;protein_id=WHI80116.1;transl_table=11 CP118825.1 Genbank gene 996925 997671 . + . ID=gene-PYH62_05035;Name=PYH62_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05035 CP118825.1 Protein Homology CDS 996925 997671 . + 0 ID=cds-WHI80117.1;Parent=gene-PYH62_05035;Dbxref=NCBI_GP:WHI80117.1;Name=WHI80117.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832720.1;locus_tag=PYH62_05035;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WHI80117.1;transl_table=11 CP118825.1 Genbank gene 997723 998325 . - . ID=gene-PYH62_05040;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=PYH62_05040 CP118825.1 Protein Homology CDS 997723 998325 . - 0 ID=cds-WHI80118.1;Parent=gene-PYH62_05040;Dbxref=NCBI_GP:WHI80118.1;Name=WHI80118.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019165370.1;locus_tag=PYH62_05040;product=30S ribosomal protein S4;protein_id=WHI80118.1;transl_table=11 CP118825.1 Genbank gene 998557 999024 . - . ID=gene-PYH62_05045;Name=PYH62_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05045 CP118825.1 Protein Homology CDS 998557 999024 . - 0 ID=cds-WHI80119.1;Parent=gene-PYH62_05045;Dbxref=NCBI_GP:WHI80119.1;Name=WHI80119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448290.1;locus_tag=PYH62_05045;product=GAF domain-containing protein;protein_id=WHI80119.1;transl_table=11 CP118825.1 Genbank gene 999156 1000850 . + . ID=gene-PYH62_05050;Name=ezrA;gbkey=Gene;gene=ezrA;gene_biotype=protein_coding;locus_tag=PYH62_05050 CP118825.1 Protein Homology CDS 999156 1000850 . + 0 ID=cds-WHI80120.1;Parent=gene-PYH62_05050;Dbxref=NCBI_GP:WHI80120.1;Name=WHI80120.1;gbkey=CDS;gene=ezrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455207.1;locus_tag=PYH62_05050;product=septation ring formation regulator EzrA;protein_id=WHI80120.1;transl_table=11 CP118825.1 Genbank gene 1001012 1002148 . + . ID=gene-PYH62_05055;Name=PYH62_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05055 CP118825.1 Protein Homology CDS 1001012 1002148 . + 0 ID=cds-WHI80121.1;Parent=gene-PYH62_05055;Dbxref=NCBI_GP:WHI80121.1;Name=WHI80121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830860.1;locus_tag=PYH62_05055;product=cysteine desulfurase family protein;protein_id=WHI80121.1;transl_table=11 CP118825.1 Genbank gene 1002149 1003372 . + . ID=gene-PYH62_05060;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=PYH62_05060 CP118825.1 Protein Homology CDS 1002149 1003372 . + 0 ID=cds-WHI80122.1;Parent=gene-PYH62_05060;Dbxref=NCBI_GP:WHI80122.1;Name=WHI80122.1;Ontology_term=GO:0006400,GO:0009228,GO:0003824;gbkey=CDS;gene=thiI;go_function=catalytic activity|0003824||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275509.1;locus_tag=PYH62_05060;product=tRNA 4-thiouridine(8) synthase ThiI;protein_id=WHI80122.1;transl_table=11 CP118825.1 Genbank gene 1003403 1004188 . + . ID=gene-PYH62_05065;Name=PYH62_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05065 CP118825.1 Protein Homology CDS 1003403 1004188 . + 0 ID=cds-WHI80123.1;Parent=gene-PYH62_05065;Dbxref=NCBI_GP:WHI80123.1;Name=WHI80123.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835455.1;locus_tag=PYH62_05065;product=TSUP family transporter;protein_id=WHI80123.1;transl_table=11 CP118825.1 Genbank gene 1004282 1004776 . + . ID=gene-PYH62_05070;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=PYH62_05070 CP118825.1 Protein Homology CDS 1004282 1004776 . + 0 ID=cds-WHI80124.1;Parent=gene-PYH62_05070;Dbxref=NCBI_GP:WHI80124.1;Name=WHI80124.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500327.1;locus_tag=PYH62_05070;product=thiol peroxidase;protein_id=WHI80124.1;transl_table=11 CP118825.1 Genbank gene 1004900 1005847 . + . ID=gene-PYH62_05075;Name=PYH62_05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05075 CP118825.1 Protein Homology CDS 1004900 1005847 . + 0 ID=cds-WHI80125.1;Parent=gene-PYH62_05075;Dbxref=NCBI_GP:WHI80125.1;Name=WHI80125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500326.1;locus_tag=PYH62_05075;product=class I SAM-dependent methyltransferase;protein_id=WHI80125.1;transl_table=11 CP118825.1 Genbank gene 1005930 1007126 . + . ID=gene-PYH62_05080;Name=PYH62_05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05080 CP118825.1 Protein Homology CDS 1005930 1007126 . + 0 ID=cds-WHI80126.1;Parent=gene-PYH62_05080;Dbxref=NCBI_GP:WHI80126.1;Name=WHI80126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275513.1;locus_tag=PYH62_05080;product=acetate kinase;protein_id=WHI80126.1;transl_table=11 CP118825.1 Genbank gene 1007308 1007805 . - . ID=gene-PYH62_05085;Name=PYH62_05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05085 CP118825.1 Protein Homology CDS 1007308 1007805 . - 0 ID=cds-WHI80127.1;Parent=gene-PYH62_05085;Dbxref=NCBI_GP:WHI80127.1;Name=WHI80127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275514.1;locus_tag=PYH62_05085;product=universal stress protein;protein_id=WHI80127.1;transl_table=11 CP118825.1 Genbank gene 1007958 1009076 . + . ID=gene-PYH62_05090;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=PYH62_05090 CP118825.1 Protein Homology CDS 1007958 1009076 . + 0 ID=cds-WHI80128.1;Parent=gene-PYH62_05090;Dbxref=NCBI_GP:WHI80128.1;Name=WHI80128.1;Ontology_term=GO:0006522,GO:0000286,GO:0005737;gbkey=CDS;gene=ald;go_component=cytoplasm|0005737||IEA;go_function=alanine dehydrogenase activity|0000286||IEA;go_process=alanine metabolic process|0006522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469674.1;locus_tag=PYH62_05090;product=alanine dehydrogenase;protein_id=WHI80128.1;transl_table=11 CP118825.1 Genbank pseudogene 1009165 1010221 . - . ID=gene-PYH62_05095;Name=PYH62_05095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_05095;pseudo=true CP118825.1 Protein Homology CDS 1009165 1010221 . - 0 ID=cds-PYH62_05095;Parent=gene-PYH62_05095;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500321.1;locus_tag=PYH62_05095;product=Xaa-Pro peptidase family protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1010351 1011040 . + . ID=gene-PYH62_05100;Name=PYH62_05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05100 CP118825.1 Protein Homology CDS 1010351 1011040 . + 0 ID=cds-WHI80129.1;Parent=gene-PYH62_05100;Dbxref=NCBI_GP:WHI80129.1;Name=WHI80129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500320.1;locus_tag=PYH62_05100;product=metal-dependent hydrolase;protein_id=WHI80129.1;transl_table=11 CP118825.1 Genbank gene 1011099 1011512 . - . ID=gene-PYH62_05105;Name=PYH62_05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05105 CP118825.1 Protein Homology CDS 1011099 1011512 . - 0 ID=cds-WHI80130.1;Parent=gene-PYH62_05105;Dbxref=NCBI_GP:WHI80130.1;Name=WHI80130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500319.1;locus_tag=PYH62_05105;product=universal stress protein;protein_id=WHI80130.1;transl_table=11 CP118825.1 Genbank pseudogene 1011729 1013028 . + . ID=gene-PYH62_05110;Name=PYH62_05110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_05110;pseudo=true CP118825.1 Protein Homology CDS 1011729 1013028 . + 0 ID=cds-PYH62_05110;Parent=gene-PYH62_05110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000160432.1;locus_tag=PYH62_05110;product=DRTGG domain-containing protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1013059 1013997 . + . ID=gene-PYH62_05115;Name=PYH62_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05115 CP118825.1 Protein Homology CDS 1013059 1013997 . + 0 ID=cds-WHI80131.1;Parent=gene-PYH62_05115;Dbxref=NCBI_GP:WHI80131.1;Name=WHI80131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835449.1;locus_tag=PYH62_05115;product=bifunctional oligoribonuclease/PAP phosphatase NrnA;protein_id=WHI80131.1;transl_table=11 CP118825.1 Genbank pseudogene 1014018 1017220 . + . ID=gene-PYH62_05120;Name=PYH62_05120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_05120;pseudo=true CP118825.1 Protein Homology CDS 1014018 1017220 . + 0 ID=cds-PYH62_05120;Parent=gene-PYH62_05120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000226919.1;locus_tag=PYH62_05120;product=DNA polymerase III subunit alpha;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1017415 1017576 . + . ID=gene-PYH62_05125;Name=PYH62_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05125 CP118825.1 GeneMarkS-2+ CDS 1017415 1017576 . + 0 ID=cds-WHI80132.1;Parent=gene-PYH62_05125;Dbxref=NCBI_GP:WHI80132.1;Name=WHI80132.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_05125;product=hypothetical protein;protein_id=WHI80132.1;transl_table=11 CP118825.1 Genbank pseudogene 1017884 1018749 . + . ID=gene-PYH62_05130;Name=accD;gbkey=Gene;gene=accD;gene_biotype=pseudogene;locus_tag=PYH62_05130;pseudo=true CP118825.1 Protein Homology CDS 1017884 1018749 . + 0 ID=cds-PYH62_05130;Parent=gene-PYH62_05130;Note=frameshifted;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275523.1;locus_tag=PYH62_05130;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;pseudo=true;transl_table=11 CP118825.1 Genbank pseudogene 1018742 1019685 . + . ID=gene-PYH62_05135;Name=PYH62_05135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_05135;pseudo=true CP118825.1 Protein Homology CDS 1018742 1019685 . + 0 ID=cds-PYH62_05135;Parent=gene-PYH62_05135;Note=frameshifted;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458874.1;locus_tag=PYH62_05135;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1019858 1020826 . + . ID=gene-PYH62_05140;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=PYH62_05140 CP118825.1 Protein Homology CDS 1019858 1020826 . + 0 ID=cds-WHI80133.1;Parent=gene-PYH62_05140;Dbxref=NCBI_GP:WHI80133.1;Name=WHI80133.1;Ontology_term=GO:0006096;gbkey=CDS;gene=pfkA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002462395.1;locus_tag=PYH62_05140;product=6-phosphofructokinase;protein_id=WHI80133.1;transl_table=11 CP118825.1 Genbank gene 1020844 1022604 . + . ID=gene-PYH62_05145;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=PYH62_05145 CP118825.1 Protein Homology CDS 1020844 1022604 . + 0 ID=cds-WHI80134.1;Parent=gene-PYH62_05145;Dbxref=NCBI_GP:WHI80134.1;Name=WHI80134.1;Ontology_term=GO:0006096,GO:0004743,GO:0005737;gbkey=CDS;gene=pyk;go_component=cytoplasm|0005737||IEA;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500311.1;locus_tag=PYH62_05145;product=pyruvate kinase;protein_id=WHI80134.1;transl_table=11 CP118825.1 Genbank gene 1022912 1024264 . - . ID=gene-PYH62_05150;Name=PYH62_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05150 CP118825.1 Protein Homology CDS 1022912 1024264 . - 0 ID=cds-WHI80135.1;Parent=gene-PYH62_05150;Dbxref=NCBI_GP:WHI80135.1;Name=WHI80135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835445.1;locus_tag=PYH62_05150;product=amino acid permease;protein_id=WHI80135.1;transl_table=11 CP118825.1 Genbank gene 1024614 1025732 . + . ID=gene-PYH62_05155;Name=PYH62_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05155 CP118825.1 Protein Homology CDS 1024614 1025732 . + 0 ID=cds-WHI80136.1;Parent=gene-PYH62_05155;Dbxref=NCBI_GP:WHI80136.1;Name=WHI80136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453430.1;locus_tag=PYH62_05155;product=citrate synthase;protein_id=WHI80136.1;transl_table=11 CP118825.1 Genbank pseudogene 1025768 1027040 . + . ID=gene-PYH62_05160;Name=icd;gbkey=Gene;gene=icd;gene_biotype=pseudogene;locus_tag=PYH62_05160;pseudo=true CP118825.1 Protein Homology CDS 1025768 1027040 . + 0 ID=cds-PYH62_05160;Parent=gene-PYH62_05160;Note=frameshifted;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500306.1;locus_tag=PYH62_05160;product=NADP-dependent isocitrate dehydrogenase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1027265 1027975 . + . ID=gene-PYH62_05165;Name=PYH62_05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05165 CP118825.1 Protein Homology CDS 1027265 1027975 . + 0 ID=cds-WHI80137.1;Parent=gene-PYH62_05165;Dbxref=NCBI_GP:WHI80137.1;Name=WHI80137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176131.1;locus_tag=PYH62_05165;product=response regulator transcription factor;protein_id=WHI80137.1;transl_table=11 CP118825.1 Genbank gene 1027975 1029672 . + . ID=gene-PYH62_05170;Name=PYH62_05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05170 CP118825.1 Protein Homology CDS 1027975 1029672 . + 0 ID=cds-WHI80138.1;Parent=gene-PYH62_05170;Dbxref=NCBI_GP:WHI80138.1;Name=WHI80138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448928.1;locus_tag=PYH62_05170;product=ATP-binding protein;protein_id=WHI80138.1;transl_table=11 CP118825.1 Genbank gene 1029853 1032489 . + . ID=gene-PYH62_05175;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=PYH62_05175 CP118825.1 Protein Homology CDS 1029853 1032489 . + 0 ID=cds-WHI80139.1;Parent=gene-PYH62_05175;Dbxref=NCBI_GP:WHI80139.1;Name=WHI80139.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500301.1;locus_tag=PYH62_05175;product=DNA polymerase I;protein_id=WHI80139.1;transl_table=11 CP118825.1 Genbank gene 1032505 1033377 . + . ID=gene-PYH62_05180;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=PYH62_05180 CP118825.1 Protein Homology CDS 1032505 1033377 . + 0 ID=cds-WHI80140.1;Parent=gene-PYH62_05180;Dbxref=NCBI_GP:WHI80140.1;Name=WHI80140.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190490.1;locus_tag=PYH62_05180;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WHI80140.1;transl_table=11 CP118825.1 Genbank gene 1033399 1034001 . + . ID=gene-PYH62_05185;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=PYH62_05185 CP118825.1 Protein Homology CDS 1033399 1034001 . + 0 ID=cds-WHI80141.1;Parent=gene-PYH62_05185;Dbxref=NCBI_GP:WHI80141.1;Name=WHI80141.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449009.1;locus_tag=PYH62_05185;product=dephospho-CoA kinase;protein_id=WHI80141.1;transl_table=11 CP118825.1 Genbank gene 1034195 1035220 . + . ID=gene-PYH62_05190;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=PYH62_05190 CP118825.1 Protein Homology CDS 1034195 1035220 . + 0 ID=cds-WHI80142.1;Parent=gene-PYH62_05190;Dbxref=NCBI_GP:WHI80142.1;Name=WHI80142.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361946.1;locus_tag=PYH62_05190;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WHI80142.1;transl_table=11 CP118825.1 Genbank gene 1035509 1035979 . + . ID=gene-PYH62_05195;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=PYH62_05195 CP118825.1 Protein Homology CDS 1035509 1035979 . + 0 ID=cds-WHI80143.1;Parent=gene-PYH62_05195;Dbxref=NCBI_GP:WHI80143.1;Name=WHI80143.1;Ontology_term=GO:0006355,GO:0140110;gbkey=CDS;gene=nrdR;go_function=transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500297.1;locus_tag=PYH62_05195;product=transcriptional regulator NrdR;protein_id=WHI80143.1;transl_table=11 CP118825.1 Genbank gene 1035980 1037350 . + . ID=gene-PYH62_05200;Name=PYH62_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05200 CP118825.1 Protein Homology CDS 1035980 1037350 . + 0 ID=cds-WHI80144.1;Parent=gene-PYH62_05200;Dbxref=NCBI_GP:WHI80144.1;Name=WHI80144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455224.1;locus_tag=PYH62_05200;product=DnaD domain protein;protein_id=WHI80144.1;transl_table=11 CP118825.1 Genbank gene 1037351 1038271 . + . ID=gene-PYH62_05205;Name=dnaI;gbkey=Gene;gene=dnaI;gene_biotype=protein_coding;locus_tag=PYH62_05205 CP118825.1 Protein Homology CDS 1037351 1038271 . + 0 ID=cds-WHI80145.1;Parent=gene-PYH62_05205;Dbxref=NCBI_GP:WHI80145.1;Name=WHI80145.1;gbkey=CDS;gene=dnaI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464979.1;locus_tag=PYH62_05205;product=primosomal protein DnaI;protein_id=WHI80145.1;transl_table=11 CP118825.1 Genbank gene 1038582 1040519 . + . ID=gene-PYH62_05210;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=PYH62_05210 CP118825.1 Protein Homology CDS 1038582 1040519 . + 0 ID=cds-WHI80146.1;Parent=gene-PYH62_05210;Dbxref=NCBI_GP:WHI80146.1;Name=WHI80146.1;Ontology_term=GO:0006435,GO:0004829,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500293.1;locus_tag=PYH62_05210;product=threonine--tRNA ligase;protein_id=WHI80146.1;transl_table=11 CP118825.1 cmsearch riboswitch 1040568 1040743 . + . ID=id-CP118825.1:1040568..1040743;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch CP118825.1 Genbank gene 1040896 1042389 . + . ID=gene-PYH62_05215;Name=PYH62_05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05215 CP118825.1 Protein Homology CDS 1040896 1042389 . + 0 ID=cds-WHI80147.1;Parent=gene-PYH62_05215;Dbxref=NCBI_GP:WHI80147.1;Name=WHI80147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458892.1;locus_tag=PYH62_05215;product=amino acid permease;protein_id=WHI80147.1;transl_table=11 CP118825.1 cmsearch sequence_feature 1042452 1042579 . + . ID=id-CP118825.1:1042452..1042579;Dbxref=RFAM:RF00558;Note=ribosomal protein L20 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.4 CP118825.1 Genbank gene 1042603 1043130 . + . ID=gene-PYH62_05220;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=PYH62_05220 CP118825.1 Protein Homology CDS 1042603 1043130 . + 0 ID=cds-WHI80148.1;Parent=gene-PYH62_05220;Dbxref=NCBI_GP:WHI80148.1;Name=WHI80148.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500291.1;locus_tag=PYH62_05220;product=translation initiation factor IF-3;protein_id=WHI80148.1;transl_table=11 CP118825.1 Genbank gene 1043158 1043358 . + . ID=gene-PYH62_05225;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=PYH62_05225 CP118825.1 Protein Homology CDS 1043158 1043358 . + 0 ID=cds-WHI80149.1;Parent=gene-PYH62_05225;Dbxref=NCBI_GP:WHI80149.1;Name=WHI80149.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmI;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830767.1;locus_tag=PYH62_05225;product=50S ribosomal protein L35;protein_id=WHI80149.1;transl_table=11 CP118825.1 Genbank gene 1043412 1043768 . + . ID=gene-PYH62_05230;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=PYH62_05230 CP118825.1 Protein Homology CDS 1043412 1043768 . + 0 ID=cds-WHI80150.1;Parent=gene-PYH62_05230;Dbxref=NCBI_GP:WHI80150.1;Name=WHI80150.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplT;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500289.1;locus_tag=PYH62_05230;product=50S ribosomal protein L20;protein_id=WHI80150.1;transl_table=11 CP118825.1 Genbank gene 1043950 1044561 . + . ID=gene-PYH62_05235;Name=PYH62_05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05235 CP118825.1 Protein Homology CDS 1043950 1044561 . + 0 ID=cds-WHI80151.1;Parent=gene-PYH62_05235;Dbxref=NCBI_GP:WHI80151.1;Name=WHI80151.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835437.1;locus_tag=PYH62_05235;product=NUDIX domain-containing protein;protein_id=WHI80151.1;transl_table=11 CP118825.1 Genbank gene 1044574 1045491 . + . ID=gene-PYH62_05240;Name=PYH62_05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05240 CP118825.1 Protein Homology CDS 1044574 1045491 . + 0 ID=cds-WHI80152.1;Parent=gene-PYH62_05240;Dbxref=NCBI_GP:WHI80152.1;Name=WHI80152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176143.1;locus_tag=PYH62_05240;product=hypothetical protein;protein_id=WHI80152.1;transl_table=11 CP118825.1 Genbank pseudogene 1045646 1046961 . + . ID=gene-PYH62_05245;Name=tig;gbkey=Gene;gene=tig;gene_biotype=pseudogene;locus_tag=PYH62_05245;pseudo=true CP118825.1 Protein Homology CDS 1045646 1046961 . + 0 ID=cds-PYH62_05245;Parent=gene-PYH62_05245;Note=frameshifted;Ontology_term=GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process='de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176144.1;locus_tag=PYH62_05245;product=trigger factor;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1047118 1048380 . + . ID=gene-PYH62_05250;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=PYH62_05250 CP118825.1 Protein Homology CDS 1047118 1048380 . + 0 ID=cds-WHI80153.1;Parent=gene-PYH62_05250;Dbxref=NCBI_GP:WHI80153.1;Name=WHI80153.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830765.1;locus_tag=PYH62_05250;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WHI80153.1;transl_table=11 CP118825.1 Genbank gene 1048532 1049122 . + . ID=gene-PYH62_05255;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=PYH62_05255 CP118825.1 Protein Homology CDS 1048532 1049122 . + 0 ID=cds-WHI80154.1;Parent=gene-PYH62_05255;Dbxref=NCBI_GP:WHI80154.1;Name=WHI80154.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500282.1;locus_tag=PYH62_05255;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WHI80154.1;transl_table=11 CP118825.1 Genbank pseudogene 1049259 1050597 . + . ID=gene-PYH62_05260;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=pseudogene;locus_tag=PYH62_05260;pseudo=true CP118825.1 Protein Homology CDS 1049259 1050597 . + 0 ID=cds-PYH62_05260;Parent=gene-PYH62_05260;Note=frameshifted;Ontology_term=GO:0006779,GO:0008883,GO:0005737;gbkey=CDS;gene=hemA;go_component=cytoplasm|0005737||IEA;go_function=glutamyl-tRNA reductase activity|0008883||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500281.1;locus_tag=PYH62_05260;product=glutamyl-tRNA reductase;pseudo=true;transl_table=11 CP118825.1 Genbank pseudogene 1050619 1051430 . + . ID=gene-PYH62_05265;Name=ccsA;gbkey=Gene;gene=ccsA;gene_biotype=pseudogene;locus_tag=PYH62_05265;pseudo=true CP118825.1 Protein Homology CDS 1050619 1051430 . + 0 ID=cds-PYH62_05265;Parent=gene-PYH62_05265;Note=frameshifted;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsA;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014373848.1;locus_tag=PYH62_05265;product=cytochrome c biogenesis protein CcsA;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1051459 1052391 . + . ID=gene-PYH62_05270;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=PYH62_05270 CP118825.1 Protein Homology CDS 1051459 1052391 . + 0 ID=cds-WHI80155.1;Parent=gene-PYH62_05270;Dbxref=NCBI_GP:WHI80155.1;Name=WHI80155.1;Ontology_term=GO:0006779,GO:0004418,GO:0005737;gbkey=CDS;gene=hemC;go_component=cytoplasm|0005737||IEA;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275555.1;locus_tag=PYH62_05270;product=hydroxymethylbilane synthase;protein_id=WHI80155.1;transl_table=11 CP118825.1 Genbank gene 1052423 1053094 . + . ID=gene-PYH62_05275;Name=PYH62_05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05275 CP118825.1 Protein Homology CDS 1052423 1053094 . + 0 ID=cds-WHI80156.1;Parent=gene-PYH62_05275;Dbxref=NCBI_GP:WHI80156.1;Name=WHI80156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176146.1;locus_tag=PYH62_05275;product=uroporphyrinogen-III synthase;protein_id=WHI80156.1;transl_table=11 CP118825.1 Genbank gene 1053094 1054068 . + . ID=gene-PYH62_05280;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=PYH62_05280 CP118825.1 Protein Homology CDS 1053094 1054068 . + 0 ID=cds-WHI80157.1;Parent=gene-PYH62_05280;Dbxref=NCBI_GP:WHI80157.1;Name=WHI80157.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001633925.1;locus_tag=PYH62_05280;product=porphobilinogen synthase;protein_id=WHI80157.1;transl_table=11 CP118825.1 Genbank gene 1054090 1055373 . + . ID=gene-PYH62_05285;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=PYH62_05285 CP118825.1 Protein Homology CDS 1054090 1055373 . + 0 ID=cds-WHI80158.1;Parent=gene-PYH62_05285;Dbxref=NCBI_GP:WHI80158.1;Name=WHI80158.1;Ontology_term=GO:0006779,GO:0042286,GO:0005737;gbkey=CDS;gene=hemL;go_component=cytoplasm|0005737||IEA;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275558.1;locus_tag=PYH62_05285;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WHI80158.1;transl_table=11 CP118825.1 Genbank gene 1055477 1056547 . + . ID=gene-PYH62_05290;Name=PYH62_05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05290 CP118825.1 Protein Homology CDS 1055477 1056547 . + 0 ID=cds-WHI80159.1;Parent=gene-PYH62_05290;Dbxref=NCBI_GP:WHI80159.1;Name=WHI80159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455234.1;locus_tag=PYH62_05290;product=AbrB family transcriptional regulator;protein_id=WHI80159.1;transl_table=11 CP118825.1 Genbank gene 1056596 1057153 . - . ID=gene-PYH62_05295;Name=PYH62_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05295 CP118825.1 Protein Homology CDS 1056596 1057153 . - 0 ID=cds-WHI80160.1;Parent=gene-PYH62_05295;Dbxref=NCBI_GP:WHI80160.1;Name=WHI80160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448956.1;locus_tag=PYH62_05295;product=DNA-3-methyladenine glycosylase I;protein_id=WHI80160.1;transl_table=11 CP118825.1 cmsearch binding_site 1057212 1057438 . + . ID=id-CP118825.1:1057212..1057438;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.4 CP118825.1 Genbank gene 1057478 1060108 . + . ID=gene-PYH62_05300;Name=PYH62_05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05300 CP118825.1 Protein Homology CDS 1057478 1060108 . + 0 ID=cds-WHI80161.1;Parent=gene-PYH62_05300;Dbxref=NCBI_GP:WHI80161.1;Name=WHI80161.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500272.1;locus_tag=PYH62_05300;product=valine--tRNA ligase;protein_id=WHI80161.1;transl_table=11 CP118825.1 Genbank gene 1060120 1061388 . + . ID=gene-PYH62_05305;Name=PYH62_05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05305 CP118825.1 Protein Homology CDS 1060120 1061388 . + 0 ID=cds-WHI80162.1;Parent=gene-PYH62_05305;Dbxref=NCBI_GP:WHI80162.1;Name=WHI80162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176149.1;locus_tag=PYH62_05305;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=WHI80162.1;transl_table=11 CP118825.1 Genbank gene 1061638 1062327 . + . ID=gene-PYH62_05310;Name=PYH62_05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05310 CP118825.1 Protein Homology CDS 1061638 1062327 . + 0 ID=cds-WHI80163.1;Parent=gene-PYH62_05310;Dbxref=NCBI_GP:WHI80163.1;Name=WHI80163.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018460.2;locus_tag=PYH62_05310;product=prepilin peptidase;protein_id=WHI80163.1;transl_table=11 CP118825.1 Genbank gene 1062351 1063028 . + . ID=gene-PYH62_05315;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=PYH62_05315 CP118825.1 Protein Homology CDS 1062351 1063028 . + 0 ID=cds-WHI80164.1;Parent=gene-PYH62_05315;Dbxref=NCBI_GP:WHI80164.1;Name=WHI80164.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176150.1;locus_tag=PYH62_05315;product=DNA repair protein RadC;protein_id=WHI80164.1;transl_table=11 CP118825.1 Genbank gene 1063106 1063387 . + . ID=gene-PYH62_05320;Name=PYH62_05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05320 CP118825.1 Protein Homology CDS 1063106 1063387 . + 0 ID=cds-WHI80165.1;Parent=gene-PYH62_05320;Dbxref=NCBI_GP:WHI80165.1;Name=WHI80165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176151.1;locus_tag=PYH62_05320;product=hypothetical protein;protein_id=WHI80165.1;transl_table=11 CP118825.1 Genbank gene 1063478 1063657 . - . ID=gene-PYH62_05325;Name=PYH62_05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05325 CP118825.1 Protein Homology CDS 1063478 1063657 . - 0 ID=cds-WHI80166.1;Parent=gene-PYH62_05325;Dbxref=NCBI_GP:WHI80166.1;Name=WHI80166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446629.1;locus_tag=PYH62_05325;product=hypothetical protein;protein_id=WHI80166.1;transl_table=11 CP118825.1 Genbank gene 1063825 1064295 . + . ID=gene-PYH62_05330;Name=PYH62_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05330 CP118825.1 Protein Homology CDS 1063825 1064295 . + 0 ID=cds-WHI80167.1;Parent=gene-PYH62_05330;Dbxref=NCBI_GP:WHI80167.1;Name=WHI80167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448941.1;locus_tag=PYH62_05330;product=DUF4930 family protein;protein_id=WHI80167.1;transl_table=11 CP118825.1 Genbank gene 1064376 1064504 . + . ID=gene-PYH62_05335;Name=PYH62_05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05335 CP118825.1 Protein Homology CDS 1064376 1064504 . + 0 ID=cds-WHI80168.1;Parent=gene-PYH62_05335;Dbxref=NCBI_GP:WHI80168.1;Name=WHI80168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176153.1;locus_tag=PYH62_05335;product=hypothetical protein;protein_id=WHI80168.1;transl_table=11 CP118825.1 Genbank pseudogene 1064673 1065507 . + . ID=gene-PYH62_05340;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=pseudogene;locus_tag=PYH62_05340;pseudo=true CP118825.1 Protein Homology CDS 1064673 1065507 . + 0 ID=cds-PYH62_05340;Parent=gene-PYH62_05340;Note=frameshifted;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176154.1;locus_tag=PYH62_05340;product=rod shape-determining protein MreC;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1065507 1066007 . + . ID=gene-PYH62_05345;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=PYH62_05345 CP118825.1 Protein Homology CDS 1065507 1066007 . + 0 ID=cds-WHI80169.1;Parent=gene-PYH62_05345;Dbxref=NCBI_GP:WHI80169.1;Name=WHI80169.1;Ontology_term=GO:0008360,GO:0003674;gbkey=CDS;gene=mreD;go_function=molecular_function|0003674||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176155.1;locus_tag=PYH62_05345;product=rod shape-determining protein MreD;protein_id=WHI80169.1;transl_table=11 CP118825.1 cmsearch sequence_feature 1066062 1066145 . + . ID=id-CP118825.1:1066062..1066145;Dbxref=RFAM:RF00559;Note=ribosomal protein L21 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.4 CP118825.1 Genbank gene 1066159 1066467 . + . ID=gene-PYH62_05350;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=PYH62_05350 CP118825.1 Protein Homology CDS 1066159 1066467 . + 0 ID=cds-WHI80170.1;Parent=gene-PYH62_05350;Dbxref=NCBI_GP:WHI80170.1;Name=WHI80170.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplU;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000457386.1;locus_tag=PYH62_05350;product=50S ribosomal protein L21;protein_id=WHI80170.1;transl_table=11 CP118825.1 Genbank gene 1066470 1066790 . + . ID=gene-PYH62_05355;Name=PYH62_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05355 CP118825.1 Protein Homology CDS 1066470 1066790 . + 0 ID=cds-WHI80171.1;Parent=gene-PYH62_05355;Dbxref=NCBI_GP:WHI80171.1;Name=WHI80171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000633692.1;locus_tag=PYH62_05355;product=ribosomal-processing cysteine protease Prp;protein_id=WHI80171.1;transl_table=11 CP118825.1 Genbank gene 1066802 1067086 . + . ID=gene-PYH62_05360;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=PYH62_05360 CP118825.1 Protein Homology CDS 1066802 1067086 . + 0 ID=cds-WHI80172.1;Parent=gene-PYH62_05360;Dbxref=NCBI_GP:WHI80172.1;Name=WHI80172.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500260.1;locus_tag=PYH62_05360;product=50S ribosomal protein L27;protein_id=WHI80172.1;transl_table=11 CP118825.1 Genbank gene 1067230 1068522 . + . ID=gene-PYH62_05365;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=PYH62_05365 CP118825.1 Protein Homology CDS 1067230 1068522 . + 0 ID=cds-WHI80173.1;Parent=gene-PYH62_05365;Dbxref=NCBI_GP:WHI80173.1;Name=WHI80173.1;Ontology_term=GO:0003924;gbkey=CDS;gene=obgE;go_function=GTPase activity|0003924||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020444729.1;locus_tag=PYH62_05365;product=GTPase ObgE;protein_id=WHI80173.1;transl_table=11 CP118825.1 Genbank gene 1068535 1068990 . + . ID=gene-PYH62_05370;Name=PYH62_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05370 CP118825.1 Protein Homology CDS 1068535 1068990 . + 0 ID=cds-WHI80174.1;Parent=gene-PYH62_05370;Dbxref=NCBI_GP:WHI80174.1;Name=WHI80174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500258.1;locus_tag=PYH62_05370;product=ACT domain-containing protein;protein_id=WHI80174.1;transl_table=11 CP118825.1 Genbank gene 1069002 1069607 . + . ID=gene-PYH62_05375;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=PYH62_05375 CP118825.1 Protein Homology CDS 1069002 1069607 . + 0 ID=cds-WHI80175.1;Parent=gene-PYH62_05375;Dbxref=NCBI_GP:WHI80175.1;Name=WHI80175.1;Ontology_term=GO:0006310,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=four-way junction helicase activity|0009378||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500257.1;locus_tag=PYH62_05375;product=Holliday junction branch migration protein RuvA;protein_id=WHI80175.1;transl_table=11 CP118825.1 Genbank gene 1069637 1070632 . + . ID=gene-PYH62_05380;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=PYH62_05380 CP118825.1 Protein Homology CDS 1069637 1070632 . + 0 ID=cds-WHI80176.1;Parent=gene-PYH62_05380;Dbxref=NCBI_GP:WHI80176.1;Name=WHI80176.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275578.1;locus_tag=PYH62_05380;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WHI80176.1;transl_table=11 CP118825.1 Genbank gene 1070642 1071667 . + . ID=gene-PYH62_05385;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=PYH62_05385 CP118825.1 Protein Homology CDS 1070642 1071667 . + 0 ID=cds-WHI80177.1;Parent=gene-PYH62_05385;Dbxref=NCBI_GP:WHI80177.1;Name=WHI80177.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500255.1;locus_tag=PYH62_05385;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WHI80177.1;transl_table=11 CP118825.1 Genbank gene 1071687 1072826 . + . ID=gene-PYH62_05390;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=PYH62_05390 CP118825.1 Protein Homology CDS 1071687 1072826 . + 0 ID=cds-WHI80178.1;Parent=gene-PYH62_05390;Dbxref=NCBI_GP:WHI80178.1;Name=WHI80178.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=queuine tRNA-ribosyltransferase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016425271.1;locus_tag=PYH62_05390;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WHI80178.1;transl_table=11 CP118825.1 Genbank gene 1072843 1073103 . + . ID=gene-PYH62_05395;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=PYH62_05395 CP118825.1 Protein Homology CDS 1072843 1073103 . + 0 ID=cds-WHI80179.1;Parent=gene-PYH62_05395;Dbxref=NCBI_GP:WHI80179.1;Name=WHI80179.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464991.1;locus_tag=PYH62_05395;product=preprotein translocase subunit YajC;protein_id=WHI80179.1;transl_table=11 CP118825.1 Genbank gene 1073299 1075584 . + . ID=gene-PYH62_05400;Name=secDF;gbkey=Gene;gene=secDF;gene_biotype=protein_coding;locus_tag=PYH62_05400 CP118825.1 Protein Homology CDS 1073299 1075584 . + 0 ID=cds-WHI80180.1;Parent=gene-PYH62_05400;Dbxref=NCBI_GP:WHI80180.1;Name=WHI80180.1;gbkey=CDS;gene=secDF;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500252.2;locus_tag=PYH62_05400;product=protein translocase subunit SecDF;protein_id=WHI80180.1;transl_table=11 CP118825.1 Genbank gene 1075710 1077983 . + . ID=gene-PYH62_05405;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=PYH62_05405 CP118825.1 Protein Homology CDS 1075710 1077983 . + 0 ID=cds-WHI80181.1;Parent=gene-PYH62_05405;Dbxref=NCBI_GP:WHI80181.1;Name=WHI80181.1;Ontology_term=GO:0006310,GO:0008297;gbkey=CDS;gene=recJ;go_function=single-stranded DNA exodeoxyribonuclease activity|0008297||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176164.1;locus_tag=PYH62_05405;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WHI80181.1;transl_table=11 CP118825.1 Genbank gene 1078005 1078523 . + . ID=gene-PYH62_05410;Name=PYH62_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05410 CP118825.1 Protein Homology CDS 1078005 1078523 . + 0 ID=cds-WHI80182.1;Parent=gene-PYH62_05410;Dbxref=NCBI_GP:WHI80182.1;Name=WHI80182.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009559512.1;locus_tag=PYH62_05410;product=adenine phosphoribosyltransferase;protein_id=WHI80182.1;transl_table=11 CP118825.1 Genbank gene 1078857 1081046 . + . ID=gene-PYH62_05415;Name=PYH62_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05415 CP118825.1 Protein Homology CDS 1078857 1081046 . + 0 ID=cds-WHI80183.1;Parent=gene-PYH62_05415;Dbxref=NCBI_GP:WHI80183.1;Name=WHI80183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500249.1;locus_tag=PYH62_05415;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=WHI80183.1;transl_table=11 CP118825.1 Genbank gene 1081062 1081514 . + . ID=gene-PYH62_05420;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=PYH62_05420 CP118825.1 Protein Homology CDS 1081062 1081514 . + 0 ID=cds-WHI80184.1;Parent=gene-PYH62_05420;Dbxref=NCBI_GP:WHI80184.1;Name=WHI80184.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275586.1;locus_tag=PYH62_05420;product=D-aminoacyl-tRNA deacylase;protein_id=WHI80184.1;transl_table=11 CP118825.1 Genbank gene 1081511 1082386 . + . ID=gene-PYH62_05425;Name=PYH62_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05425 CP118825.1 Protein Homology CDS 1081511 1082386 . + 0 ID=cds-WHI80185.1;Parent=gene-PYH62_05425;Dbxref=NCBI_GP:WHI80185.1;Name=WHI80185.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457780.1;locus_tag=PYH62_05425;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WHI80185.1;transl_table=11 CP118825.1 Genbank gene 1082738 1084015 . + . ID=gene-PYH62_05430;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=PYH62_05430 CP118825.1 Protein Homology CDS 1082738 1084015 . + 0 ID=cds-WHI80186.1;Parent=gene-PYH62_05430;Dbxref=NCBI_GP:WHI80186.1;Name=WHI80186.1;Ontology_term=GO:0006427,GO:0004821,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835425.1;locus_tag=PYH62_05430;product=histidine--tRNA ligase;protein_id=WHI80186.1;transl_table=11 CP118825.1 Genbank gene 1084015 1085781 . + . ID=gene-PYH62_05435;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=PYH62_05435 CP118825.1 Protein Homology CDS 1084015 1085781 . + 0 ID=cds-WHI80187.1;Parent=gene-PYH62_05435;Dbxref=NCBI_GP:WHI80187.1;Name=WHI80187.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500245.1;locus_tag=PYH62_05435;product=aspartate--tRNA ligase;protein_id=WHI80187.1;transl_table=11 CP118825.1 Genbank gene 1085994 1086184 . + . ID=gene-PYH62_05440;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=PYH62_05440 CP118825.1 cmsearch ncRNA 1085994 1086184 . + . ID=rna-PYH62_05440;Parent=gene-PYH62_05440;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_05440;product=6S RNA CP118825.1 cmsearch exon 1085994 1086184 . + . ID=exon-PYH62_05440-1;Parent=rna-PYH62_05440;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_05440;product=6S RNA CP118825.1 Genbank gene 1086273 1087049 . + . ID=gene-PYH62_05445;Name=PYH62_05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05445 CP118825.1 Protein Homology CDS 1086273 1087049 . + 0 ID=cds-WHI80188.1;Parent=gene-PYH62_05445;Dbxref=NCBI_GP:WHI80188.1;Name=WHI80188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493905.1;locus_tag=PYH62_05445;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=WHI80188.1;transl_table=11 CP118825.1 Genbank gene 1087104 1088372 . - . ID=gene-PYH62_05450;Name=PYH62_05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05450 CP118825.1 Protein Homology CDS 1087104 1088372 . - 0 ID=cds-WHI80189.1;Parent=gene-PYH62_05450;Dbxref=NCBI_GP:WHI80189.1;Name=WHI80189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176171.1;locus_tag=PYH62_05450;product=replication-associated recombination protein A;protein_id=WHI80189.1;transl_table=11 CP118825.1 Genbank gene 1088456 1088878 . + . ID=gene-PYH62_05455;Name=PYH62_05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05455 CP118825.1 Protein Homology CDS 1088456 1088878 . + 0 ID=cds-WHI80190.1;Parent=gene-PYH62_05455;Dbxref=NCBI_GP:WHI80190.1;Name=WHI80190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458938.1;locus_tag=PYH62_05455;product=Rrf2 family transcriptional regulator;protein_id=WHI80190.1;transl_table=11 CP118825.1 Genbank gene 1088988 1089131 . + . ID=gene-PYH62_05460;Name=PYH62_05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05460 CP118825.1 Protein Homology CDS 1088988 1089131 . + 0 ID=cds-WHI80191.1;Parent=gene-PYH62_05460;Dbxref=NCBI_GP:WHI80191.1;Name=WHI80191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000011355.1;locus_tag=PYH62_05460;product=SAS049 family protein;protein_id=WHI80191.1;transl_table=11 CP118825.1 Genbank gene 1089230 1090234 . - . ID=gene-PYH62_05465;Name=PYH62_05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05465 CP118825.1 Protein Homology CDS 1089230 1090234 . - 0 ID=cds-WHI80192.1;Parent=gene-PYH62_05465;Dbxref=NCBI_GP:WHI80192.1;Name=WHI80192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835424.1;locus_tag=PYH62_05465;product=LLM class flavin-dependent oxidoreductase;protein_id=WHI80192.1;transl_table=11 CP118825.1 Genbank gene 1090434 1091573 . + . ID=gene-PYH62_05470;Name=PYH62_05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05470 CP118825.1 Protein Homology CDS 1090434 1091573 . + 0 ID=cds-WHI80193.1;Parent=gene-PYH62_05470;Dbxref=NCBI_GP:WHI80193.1;Name=WHI80193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488002.1;locus_tag=PYH62_05470;product=cysteine desulfurase family protein;protein_id=WHI80193.1;transl_table=11 CP118825.1 Genbank gene 1091577 1092689 . + . ID=gene-PYH62_05475;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=PYH62_05475 CP118825.1 Protein Homology CDS 1091577 1092689 . + 0 ID=cds-WHI80194.1;Parent=gene-PYH62_05475;Dbxref=NCBI_GP:WHI80194.1;Name=WHI80194.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830892.1;locus_tag=PYH62_05475;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WHI80194.1;transl_table=11 CP118825.1 Genbank gene 1092776 1093447 . + . ID=gene-PYH62_05480;Name=PYH62_05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05480 CP118825.1 Protein Homology CDS 1092776 1093447 . + 0 ID=cds-WHI80195.1;Parent=gene-PYH62_05480;Dbxref=NCBI_GP:WHI80195.1;Name=WHI80195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176176.1;locus_tag=PYH62_05480;product=tetratricopeptide repeat protein;protein_id=WHI80195.1;transl_table=11 CP118825.1 Genbank gene 1093449 1095872 . + . ID=gene-PYH62_05485;Name=PYH62_05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05485 CP118825.1 Protein Homology CDS 1093449 1095872 . + 0 ID=cds-WHI80196.1;Parent=gene-PYH62_05485;Dbxref=NCBI_GP:WHI80196.1;Name=WHI80196.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446603.1;locus_tag=PYH62_05485;product=ATP-dependent RecD-like DNA helicase;protein_id=WHI80196.1;transl_table=11 CP118825.1 Genbank gene 1096152 1098782 . + . ID=gene-PYH62_05490;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=PYH62_05490 CP118825.1 Protein Homology CDS 1096152 1098782 . + 0 ID=cds-WHI80197.1;Parent=gene-PYH62_05490;Dbxref=NCBI_GP:WHI80197.1;Name=WHI80197.1;Ontology_term=GO:0006419,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500231.1;locus_tag=PYH62_05490;product=alanine--tRNA ligase;protein_id=WHI80197.1;transl_table=11 CP118825.1 Genbank gene 1098847 1099107 . + . ID=gene-PYH62_05495;Name=PYH62_05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05495 CP118825.1 Protein Homology CDS 1098847 1099107 . + 0 ID=cds-WHI80198.1;Parent=gene-PYH62_05495;Dbxref=NCBI_GP:WHI80198.1;Name=WHI80198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500230.1;locus_tag=PYH62_05495;product=IreB family regulatory phosphoprotein;protein_id=WHI80198.1;transl_table=11 CP118825.1 Genbank pseudogene 1099108 1099535 . + . ID=gene-PYH62_05500;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=pseudogene;locus_tag=PYH62_05500;pseudo=true CP118825.1 Protein Homology CDS 1099108 1099535 . + 0 ID=cds-PYH62_05500;Parent=gene-PYH62_05500;Note=frameshifted;Ontology_term=GO:0008150,GO:0003674,GO:0005737;gbkey=CDS;gene=ruvX;go_component=cytoplasm|0005737||IEA;go_function=molecular_function|0003674||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830837.1;locus_tag=PYH62_05500;product=Holliday junction resolvase RuvX;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1099550 1099864 . + . ID=gene-PYH62_05505;Name=PYH62_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05505 CP118825.1 Protein Homology CDS 1099550 1099864 . + 0 ID=cds-WHI80199.1;Parent=gene-PYH62_05505;Dbxref=NCBI_GP:WHI80199.1;Name=WHI80199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500228.1;locus_tag=PYH62_05505;product=DUF1292 domain-containing protein;protein_id=WHI80199.1;transl_table=11 CP118825.1 Genbank gene 1100125 1100760 . + . ID=gene-PYH62_05510;Name=PYH62_05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05510 CP118825.1 Protein Homology CDS 1100125 1100760 . + 0 ID=cds-WHI80200.1;Parent=gene-PYH62_05510;Dbxref=NCBI_GP:WHI80200.1;Name=WHI80200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457769.1;locus_tag=PYH62_05510;product=O-methyltransferase;protein_id=WHI80200.1;transl_table=11 CP118825.1 Genbank pseudogene 1100763 1101687 . + . ID=gene-PYH62_05515;Name=PYH62_05515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_05515;pseudo=true CP118825.1 Protein Homology CDS 1100763 1101687 . + 0 ID=cds-PYH62_05515;Parent=gene-PYH62_05515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500226.1;locus_tag=PYH62_05515;product=U32 family peptidase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1101701 1102969 . + . ID=gene-PYH62_05520;Name=PYH62_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05520 CP118825.1 Protein Homology CDS 1101701 1102969 . + 0 ID=cds-WHI80201.1;Parent=gene-PYH62_05520;Dbxref=NCBI_GP:WHI80201.1;Name=WHI80201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002512468.1;locus_tag=PYH62_05520;product=U32 family peptidase;protein_id=WHI80201.1;transl_table=11 CP118825.1 Genbank gene 1102969 1103592 . + . ID=gene-PYH62_05525;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=PYH62_05525 CP118825.1 Protein Homology CDS 1102969 1103592 . + 0 ID=cds-WHI80202.1;Parent=gene-PYH62_05525;Dbxref=NCBI_GP:WHI80202.1;Name=WHI80202.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448951.1;locus_tag=PYH62_05525;product=uridine kinase;protein_id=WHI80202.1;transl_table=11 CP118825.1 Genbank gene 1103650 1104126 . + . ID=gene-PYH62_05530;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=PYH62_05530 CP118825.1 Protein Homology CDS 1103650 1104126 . + 0 ID=cds-WHI80203.1;Parent=gene-PYH62_05530;Dbxref=NCBI_GP:WHI80203.1;Name=WHI80203.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500223.1;locus_tag=PYH62_05530;product=transcription elongation factor GreA;protein_id=WHI80203.1;transl_table=11 CP118825.1 Genbank gene 1104463 1105191 . + . ID=gene-PYH62_05535;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=PYH62_05535 CP118825.1 Protein Homology CDS 1104463 1105191 . + 0 ID=cds-WHI80204.1;Parent=gene-PYH62_05535;Dbxref=NCBI_GP:WHI80204.1;Name=WHI80204.1;gbkey=CDS;gene=pxpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449810.1;locus_tag=PYH62_05535;product=5-oxoprolinase subunit PxpB;protein_id=WHI80204.1;transl_table=11 CP118825.1 Genbank gene 1105181 1106185 . + . ID=gene-PYH62_05540;Name=PYH62_05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05540 CP118825.1 Protein Homology CDS 1105181 1106185 . + 0 ID=cds-WHI80205.1;Parent=gene-PYH62_05540;Dbxref=NCBI_GP:WHI80205.1;Name=WHI80205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475152.1;locus_tag=PYH62_05540;product=biotin-dependent carboxyltransferase family protein;protein_id=WHI80205.1;transl_table=11 CP118825.1 Genbank gene 1106188 1106628 . + . ID=gene-PYH62_05545;Name=PYH62_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05545 CP118825.1 Protein Homology CDS 1106188 1106628 . + 0 ID=cds-WHI80206.1;Parent=gene-PYH62_05545;Dbxref=NCBI_GP:WHI80206.1;Name=WHI80206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473639.1;locus_tag=PYH62_05545;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=WHI80206.1;transl_table=11 CP118825.1 Genbank gene 1106645 1108006 . + . ID=gene-PYH62_05550;Name=PYH62_05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05550 CP118825.1 Protein Homology CDS 1106645 1108006 . + 0 ID=cds-WHI80207.1;Parent=gene-PYH62_05550;Dbxref=NCBI_GP:WHI80207.1;Name=WHI80207.1;Ontology_term=GO:0005524,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500219.1;locus_tag=PYH62_05550;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WHI80207.1;transl_table=11 CP118825.1 Genbank gene 1108006 1108758 . + . ID=gene-PYH62_05555;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=PYH62_05555 CP118825.1 Protein Homology CDS 1108006 1108758 . + 0 ID=cds-WHI80241.1;Parent=gene-PYH62_05555;Dbxref=NCBI_GP:WHI80241.1;Name=WHI80241.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500218.1;locus_tag=PYH62_05555;product=5-oxoprolinase subunit PxpA;protein_id=WHI80241.1;transl_table=11 CP118825.1 Genbank pseudogene 1108771 1110011 . + . ID=gene-PYH62_05560;Name=PYH62_05560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_05560;pseudo=true CP118825.1 Protein Homology CDS 1108771 1110011 . + 0 ID=cds-PYH62_05560;Parent=gene-PYH62_05560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176191.1;locus_tag=PYH62_05560;product=divalent metal cation transporter;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1110179 1110865 . + . ID=gene-PYH62_05565;Name=PYH62_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05565 CP118825.1 Protein Homology CDS 1110179 1110865 . + 0 ID=cds-WHI80208.1;Parent=gene-PYH62_05565;Dbxref=NCBI_GP:WHI80208.1;Name=WHI80208.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579266.1;locus_tag=PYH62_05565;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WHI80208.1;transl_table=11 CP118825.1 Genbank gene 1110893 1111420 . + . ID=gene-PYH62_05570;Name=PYH62_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05570 CP118825.1 Protein Homology CDS 1110893 1111420 . + 0 ID=cds-WHI80209.1;Parent=gene-PYH62_05570;Dbxref=NCBI_GP:WHI80209.1;Name=WHI80209.1;Ontology_term=GO:0008962;gbkey=CDS;go_function=phosphatidylglycerophosphatase activity|0008962||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489453.1;locus_tag=PYH62_05570;product=YqeG family HAD IIIA-type phosphatase;protein_id=WHI80209.1;transl_table=11 CP118825.1 Genbank gene 1111421 1112521 . + . ID=gene-PYH62_05575;Name=yqeH;gbkey=Gene;gene=yqeH;gene_biotype=protein_coding;locus_tag=PYH62_05575 CP118825.1 Protein Homology CDS 1111421 1112521 . + 0 ID=cds-WHI80210.1;Parent=gene-PYH62_05575;Dbxref=NCBI_GP:WHI80210.1;Name=WHI80210.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=yqeH;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500210.1;locus_tag=PYH62_05575;product=ribosome biogenesis GTPase YqeH;protein_id=WHI80210.1;transl_table=11 CP118825.1 Genbank gene 1112534 1113340 . + . ID=gene-PYH62_05580;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=PYH62_05580 CP118825.1 Protein Homology CDS 1112534 1113340 . + 0 ID=cds-WHI80211.1;Parent=gene-PYH62_05580;Dbxref=NCBI_GP:WHI80211.1;Name=WHI80211.1;Ontology_term=GO:0009423,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000666757.1;locus_tag=PYH62_05580;product=shikimate dehydrogenase;protein_id=WHI80211.1;transl_table=11 CP118825.1 Genbank gene 1113347 1113637 . + . ID=gene-PYH62_05585;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=PYH62_05585 CP118825.1 Protein Homology CDS 1113347 1113637 . + 0 ID=cds-WHI80212.1;Parent=gene-PYH62_05585;Dbxref=NCBI_GP:WHI80212.1;Name=WHI80212.1;Ontology_term=GO:0008150,GO:0003723,GO:0005737;gbkey=CDS;gene=yhbY;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500208.1;locus_tag=PYH62_05585;product=ribosome assembly RNA-binding protein YhbY;protein_id=WHI80212.1;transl_table=11 CP118825.1 Genbank gene 1113642 1114211 . + . ID=gene-PYH62_05590;Name=PYH62_05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05590 CP118825.1 Protein Homology CDS 1113642 1114211 . + 0 ID=cds-WHI80213.1;Parent=gene-PYH62_05590;Dbxref=NCBI_GP:WHI80213.1;Name=WHI80213.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000725166.1;locus_tag=PYH62_05590;product=nicotinate-nucleotide adenylyltransferase;protein_id=WHI80213.1;transl_table=11 CP118825.1 Genbank gene 1114201 1114785 . + . ID=gene-PYH62_05595;Name=yqeK;gbkey=Gene;gene=yqeK;gene_biotype=protein_coding;locus_tag=PYH62_05595 CP118825.1 Protein Homology CDS 1114201 1114785 . + 0 ID=cds-WHI80214.1;Parent=gene-PYH62_05595;Dbxref=NCBI_GP:WHI80214.1;Name=WHI80214.1;gbkey=CDS;gene=yqeK;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500206.1;locus_tag=PYH62_05595;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK;protein_id=WHI80214.1;transl_table=11 CP118825.1 Genbank pseudogene 1114786 1115140 . + . ID=gene-PYH62_05600;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=pseudogene;locus_tag=PYH62_05600;pseudo=true CP118825.1 Protein Homology CDS 1114786 1115140 . + 0 ID=cds-PYH62_05600;Parent=gene-PYH62_05600;Note=frameshifted;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500205.1;locus_tag=PYH62_05600;product=ribosome silencing factor;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1115142 1115873 . + . ID=gene-PYH62_05605;Name=PYH62_05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05605 CP118825.1 Protein Homology CDS 1115142 1115873 . + 0 ID=cds-WHI78320.1;Parent=gene-PYH62_05605;Dbxref=NCBI_GP:WHI78320.1;Name=WHI78320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176198.1;locus_tag=PYH62_05605;product=class I SAM-dependent methyltransferase;protein_id=WHI78320.1;transl_table=11 CP118825.1 Genbank gene 1115926 1116588 . + . ID=gene-PYH62_05610;Name=PYH62_05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05610 CP118825.1 Protein Homology CDS 1115926 1116588 . + 0 ID=cds-WHI78321.1;Parent=gene-PYH62_05610;Dbxref=NCBI_GP:WHI78321.1;Name=WHI78321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834857.1;locus_tag=PYH62_05610;product=helix-hairpin-helix domain-containing protein;protein_id=WHI78321.1;transl_table=11 CP118825.1 Genbank gene 1116655 1117119 . + . ID=gene-PYH62_05615;Name=PYH62_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05615 CP118825.1 Protein Homology CDS 1116655 1117119 . + 0 ID=cds-WHI78322.1;Parent=gene-PYH62_05615;Dbxref=NCBI_GP:WHI78322.1;Name=WHI78322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176200.1;locus_tag=PYH62_05615;product=ComE operon protein 2;protein_id=WHI78322.1;transl_table=11 CP118825.1 Genbank gene 1117296 1117934 . + . ID=gene-PYH62_05620;Name=PYH62_05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05620 CP118825.1 Protein Homology CDS 1117296 1117934 . + 0 ID=cds-WHI78323.1;Parent=gene-PYH62_05620;Dbxref=NCBI_GP:WHI78323.1;Name=WHI78323.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015714.2;locus_tag=PYH62_05620;product=ComEC/Rec2 family competence protein;protein_id=WHI78323.1;transl_table=11 CP118825.1 Genbank gene 1117876 1119303 . + . ID=gene-PYH62_05625;Name=PYH62_05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05625 CP118825.1 Protein Homology CDS 1117876 1119303 . + 0 ID=cds-WHI78324.1;Parent=gene-PYH62_05625;Dbxref=NCBI_GP:WHI78324.1;Name=WHI78324.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015714.2;locus_tag=PYH62_05625;product=ComEC/Rec2 family competence protein;protein_id=WHI78324.1;transl_table=11 CP118825.1 Genbank gene 1119374 1120348 . + . ID=gene-PYH62_05630;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=PYH62_05630 CP118825.1 Protein Homology CDS 1119374 1120348 . + 0 ID=cds-WHI78325.1;Parent=gene-PYH62_05630;Dbxref=NCBI_GP:WHI78325.1;Name=WHI78325.1;Ontology_term=GO:0006260,GO:0003887,GO:0009360;gbkey=CDS;gene=holA;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500200.1;locus_tag=PYH62_05630;product=DNA polymerase III subunit delta;protein_id=WHI78325.1;transl_table=11 CP118825.1 Genbank gene 1120390 1120641 . - . ID=gene-PYH62_05635;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=PYH62_05635 CP118825.1 Protein Homology CDS 1120390 1120641 . - 0 ID=cds-WHI78326.1;Parent=gene-PYH62_05635;Dbxref=NCBI_GP:WHI78326.1;Name=WHI78326.1;Ontology_term=GO:0006412,GO:0003735,GO:0000312,GO:0022627;gbkey=CDS;gene=rpsT;go_component=plastid small ribosomal subunit|0000312||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500199.1;locus_tag=PYH62_05635;product=30S ribosomal protein S20;protein_id=WHI78326.1;transl_table=11 CP118825.1 Genbank gene 1120972 1122795 . + . ID=gene-PYH62_05640;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=PYH62_05640 CP118825.1 Protein Homology CDS 1120972 1122795 . + 0 ID=cds-WHI78327.1;Parent=gene-PYH62_05640;Dbxref=NCBI_GP:WHI78327.1;Name=WHI78327.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500198.1;locus_tag=PYH62_05640;product=translation elongation factor 4;protein_id=WHI78327.1;transl_table=11 CP118825.1 Genbank gene 1122878 1123999 . + . ID=gene-PYH62_05645;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=PYH62_05645 CP118825.1 Protein Homology CDS 1122878 1123999 . + 0 ID=cds-WHI78328.1;Parent=gene-PYH62_05645;Dbxref=NCBI_GP:WHI78328.1;Name=WHI78328.1;Ontology_term=GO:0006779,GO:0051989;gbkey=CDS;gene=hemW;go_function=coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834859.1;locus_tag=PYH62_05645;product=radical SAM family heme chaperone HemW;protein_id=WHI78328.1;transl_table=11 CP118825.1 Genbank gene 1124103 1125080 . + . ID=gene-PYH62_05650;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=PYH62_05650 CP118825.1 Protein Homology CDS 1124103 1125080 . + 0 ID=cds-WHI78329.1;Parent=gene-PYH62_05650;Dbxref=NCBI_GP:WHI78329.1;Name=WHI78329.1;Ontology_term=GO:0009408,GO:0005737;gbkey=CDS;gene=hrcA;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275631.1;locus_tag=PYH62_05650;product=heat-inducible transcriptional repressor HrcA;protein_id=WHI78329.1;transl_table=11 CP118825.1 Genbank gene 1125112 1125735 . + . ID=gene-PYH62_05655;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=PYH62_05655 CP118825.1 Protein Homology CDS 1125112 1125735 . + 0 ID=cds-WHI78330.1;Parent=gene-PYH62_05655;Dbxref=NCBI_GP:WHI78330.1;Name=WHI78330.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275632.1;locus_tag=PYH62_05655;product=nucleotide exchange factor GrpE;protein_id=WHI78330.1;transl_table=11 CP118825.1 Genbank gene 1125778 1127610 . + . ID=gene-PYH62_05660;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=PYH62_05660 CP118825.1 Protein Homology CDS 1125778 1127610 . + 0 ID=cds-WHI78331.1;Parent=gene-PYH62_05660;Dbxref=NCBI_GP:WHI78331.1;Name=WHI78331.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503178.1;locus_tag=PYH62_05660;product=molecular chaperone DnaK;protein_id=WHI78331.1;transl_table=11 CP118825.1 Genbank gene 1127763 1128893 . + . ID=gene-PYH62_05665;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=PYH62_05665 CP118825.1 Protein Homology CDS 1127763 1128893 . + 0 ID=cds-WHI78332.1;Parent=gene-PYH62_05665;Dbxref=NCBI_GP:WHI78332.1;Name=WHI78332.1;Ontology_term=GO:0006457,GO:0009408,GO:0005524,GO:0031072,GO:0051082;gbkey=CDS;gene=dnaJ;go_function=ATP binding|0005524||IEA,heat shock protein binding|0031072||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500192.1;locus_tag=PYH62_05665;product=molecular chaperone DnaJ;protein_id=WHI78332.1;transl_table=11 CP118825.1 Genbank gene 1128896 1129834 . + . ID=gene-PYH62_05670;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=PYH62_05670 CP118825.1 Protein Homology CDS 1128896 1129834 . + 0 ID=cds-WHI78333.1;Parent=gene-PYH62_05670;Dbxref=NCBI_GP:WHI78333.1;Name=WHI78333.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500191.1;locus_tag=PYH62_05670;product=50S ribosomal protein L11 methyltransferase;protein_id=WHI78333.1;transl_table=11 CP118825.1 Genbank gene 1129836 1130588 . + . ID=gene-PYH62_05675;Name=PYH62_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05675 CP118825.1 Protein Homology CDS 1129836 1130588 . + 0 ID=cds-WHI78334.1;Parent=gene-PYH62_05675;Dbxref=NCBI_GP:WHI78334.1;Name=WHI78334.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190422.1;locus_tag=PYH62_05675;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WHI78334.1;transl_table=11 CP118825.1 Genbank gene 1130594 1131940 . + . ID=gene-PYH62_05680;Name=mtaB;gbkey=Gene;gene=mtaB;gene_biotype=protein_coding;locus_tag=PYH62_05680 CP118825.1 Protein Homology CDS 1130594 1131940 . + 0 ID=cds-WHI78335.1;Parent=gene-PYH62_05680;Dbxref=NCBI_GP:WHI78335.1;Name=WHI78335.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=mtaB;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500189.1;locus_tag=PYH62_05680;product=tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase MtaB;protein_id=WHI78335.1;transl_table=11 CP118825.1 Genbank gene 1132073 1132249 . + . ID=gene-PYH62_05685;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=PYH62_05685 CP118825.1 Protein Homology CDS 1132073 1132249 . + 0 ID=cds-WHI78336.1;Parent=gene-PYH62_05685;Dbxref=NCBI_GP:WHI78336.1;Name=WHI78336.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsU;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016998564.1;locus_tag=PYH62_05685;product=30S ribosomal protein S21;protein_id=WHI78336.1;transl_table=11 CP118825.1 Genbank gene 1132401 1133108 . + . ID=gene-PYH62_05690;Name=PYH62_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05690 CP118825.1 Protein Homology CDS 1132401 1133108 . + 0 ID=cds-WHI78337.1;Parent=gene-PYH62_05690;Dbxref=NCBI_GP:WHI78337.1;Name=WHI78337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449826.1;locus_tag=PYH62_05690;product=NfeD family protein;protein_id=WHI78337.1;transl_table=11 CP118825.1 Genbank gene 1133123 1134109 . + . ID=gene-PYH62_05695;Name=floA;gbkey=Gene;gene=floA;gene_biotype=protein_coding;locus_tag=PYH62_05695 CP118825.1 Protein Homology CDS 1133123 1134109 . + 0 ID=cds-WHI78338.1;Parent=gene-PYH62_05695;Dbxref=NCBI_GP:WHI78338.1;Name=WHI78338.1;Note=flotillin-like protein involved in membrane lipid rafts;gbkey=CDS;gene=floA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449729.1;locus_tag=PYH62_05695;product=flotillin-like protein FloA;protein_id=WHI78338.1;transl_table=11 CP118825.1 Genbank gene 1134126 1134821 . + . ID=gene-PYH62_05700;Name=PYH62_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05700 CP118825.1 Protein Homology CDS 1134126 1134821 . + 0 ID=cds-WHI78339.1;Parent=gene-PYH62_05700;Dbxref=NCBI_GP:WHI78339.1;Name=WHI78339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176215.1;locus_tag=PYH62_05700;product=hypothetical protein;protein_id=WHI78339.1;transl_table=11 CP118825.1 Genbank gene 1135094 1136041 . + . ID=gene-PYH62_05705;Name=PYH62_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05705 CP118825.1 Protein Homology CDS 1135094 1136041 . + 0 ID=cds-WHI78340.1;Parent=gene-PYH62_05705;Dbxref=NCBI_GP:WHI78340.1;Name=WHI78340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500184.1;locus_tag=PYH62_05705;product=PhoH family protein;protein_id=WHI78340.1;transl_table=11 CP118825.1 Genbank gene 1136042 1136503 . + . ID=gene-PYH62_05710;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=PYH62_05710 CP118825.1 Protein Homology CDS 1136042 1136503 . + 0 ID=cds-WHI78341.1;Parent=gene-PYH62_05710;Dbxref=NCBI_GP:WHI78341.1;Name=WHI78341.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=ribonuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500183.1;locus_tag=PYH62_05710;product=rRNA maturation RNase YbeY;protein_id=WHI78341.1;transl_table=11 CP118825.1 Genbank gene 1136499 1136846 . + . ID=gene-PYH62_05715;Name=PYH62_05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05715 CP118825.1 Protein Homology CDS 1136499 1136846 . + 0 ID=cds-WHI80242.1;Parent=gene-PYH62_05715;Dbxref=NCBI_GP:WHI80242.1;Name=WHI80242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303000.1;locus_tag=PYH62_05715;product=diacylglycerol kinase family protein;protein_id=WHI80242.1;transl_table=11 CP118825.1 Genbank gene 1136860 1137264 . + . ID=gene-PYH62_05720;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=PYH62_05720 CP118825.1 Protein Homology CDS 1136860 1137264 . + 0 ID=cds-WHI78342.1;Parent=gene-PYH62_05720;Dbxref=NCBI_GP:WHI78342.1;Name=WHI78342.1;Ontology_term=GO:0008655,GO:0004126,GO:0005737;gbkey=CDS;gene=cdd;go_component=cytoplasm|0005737||IEA;go_function=cytidine deaminase activity|0004126||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500181.1;locus_tag=PYH62_05720;product=cytidine deaminase;protein_id=WHI78342.1;transl_table=11 CP118825.1 Genbank gene 1137265 1138164 . + . ID=gene-PYH62_05725;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=PYH62_05725 CP118825.1 Protein Homology CDS 1137265 1138164 . + 0 ID=cds-WHI78343.1;Parent=gene-PYH62_05725;Dbxref=NCBI_GP:WHI78343.1;Name=WHI78343.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000134760.1;locus_tag=PYH62_05725;product=GTPase Era;protein_id=WHI78343.1;transl_table=11 CP118825.1 Genbank gene 1138198 1138947 . + . ID=gene-PYH62_05730;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=PYH62_05730 CP118825.1 Protein Homology CDS 1138198 1138947 . + 0 ID=cds-WHI78344.1;Parent=gene-PYH62_05730;Dbxref=NCBI_GP:WHI78344.1;Name=WHI78344.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455279.1;locus_tag=PYH62_05730;product=DNA repair protein RecO;protein_id=WHI78344.1;transl_table=11 CP118825.1 Genbank gene 1139020 1140411 . - . ID=gene-PYH62_05735;Name=PYH62_05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05735 CP118825.1 Protein Homology CDS 1139020 1140411 . - 0 ID=cds-WHI78345.1;Parent=gene-PYH62_05735;Dbxref=NCBI_GP:WHI78345.1;Name=WHI78345.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500177.1;locus_tag=PYH62_05735;product=glycine--tRNA ligase;protein_id=WHI78345.1;transl_table=11 CP118825.1 Genbank gene 1140742 1141365 . + . ID=gene-PYH62_05740;Name=PYH62_05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05740 CP118825.1 Protein Homology CDS 1140742 1141365 . + 0 ID=cds-WHI80243.1;Parent=gene-PYH62_05740;Dbxref=NCBI_GP:WHI80243.1;Name=WHI80243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001797828.1;locus_tag=PYH62_05740;product=helix-turn-helix transcriptional regulator;protein_id=WHI80243.1;transl_table=11 CP118825.1 Genbank pseudogene 1141376 1142189 . + . ID=gene-PYH62_05745;Name=PYH62_05745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_05745;pseudo=true CP118825.1 Protein Homology CDS 1141376 1142189 . + 0 ID=cds-PYH62_05745;Parent=gene-PYH62_05745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176221.1;locus_tag=PYH62_05745;product=kinase/pyrophosphorylase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1142253 1144061 . + . ID=gene-PYH62_05750;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=PYH62_05750 CP118825.1 Protein Homology CDS 1142253 1144061 . + 0 ID=cds-WHI78346.1;Parent=gene-PYH62_05750;Dbxref=NCBI_GP:WHI78346.1;Name=WHI78346.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002501017.1;locus_tag=PYH62_05750;product=DNA primase;protein_id=WHI78346.1;transl_table=11 CP118825.1 Genbank gene 1144334 1145440 . + . ID=gene-PYH62_05755;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=PYH62_05755 CP118825.1 Protein Homology CDS 1144334 1145440 . + 0 ID=cds-WHI78347.1;Parent=gene-PYH62_05755;Dbxref=NCBI_GP:WHI78347.1;Name=WHI78347.1;Ontology_term=GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275651.1;locus_tag=PYH62_05755;product=RNA polymerase sigma factor RpoD;protein_id=WHI78347.1;transl_table=11 CP118825.1 Genbank gene 1145544 1146233 . + . ID=gene-PYH62_05760;Name=PYH62_05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05760 CP118825.1 Protein Homology CDS 1145544 1146233 . + 0 ID=cds-WHI78348.1;Parent=gene-PYH62_05760;Dbxref=NCBI_GP:WHI78348.1;Name=WHI78348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446546.1;locus_tag=PYH62_05760;product=tRNA (adenine(22)-N(1))-methyltransferase TrmK;protein_id=WHI78348.1;transl_table=11 CP118825.1 Genbank pseudogene 1146223 1147328 . + . ID=gene-PYH62_05765;Name=PYH62_05765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_05765;pseudo=true CP118825.1 Protein Homology CDS 1146223 1147328 . + 0 ID=cds-PYH62_05765;Parent=gene-PYH62_05765;Note=frameshifted;Ontology_term=GO:0008150,GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455282.1;locus_tag=PYH62_05765;product=Nif3-like dinuclear metal center hexameric protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1147353 1148699 . + . ID=gene-PYH62_05770;Name=PYH62_05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05770 CP118825.1 Protein Homology CDS 1147353 1148699 . + 0 ID=cds-WHI78349.1;Parent=gene-PYH62_05770;Dbxref=NCBI_GP:WHI78349.1;Name=WHI78349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500170.1;locus_tag=PYH62_05770;product=DEAD/DEAH box helicase;protein_id=WHI78349.1;transl_table=11 CP118825.1 Genbank gene 1148709 1149599 . + . ID=gene-PYH62_05775;Name=PYH62_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05775 CP118825.1 Protein Homology CDS 1148709 1149599 . + 0 ID=cds-WHI78350.1;Parent=gene-PYH62_05775;Dbxref=NCBI_GP:WHI78350.1;Name=WHI78350.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500169.1;locus_tag=PYH62_05775;product=deoxyribonuclease IV;protein_id=WHI78350.1;transl_table=11 CP118825.1 Genbank gene 1149720 1150496 . + . ID=gene-PYH62_05780;Name=PYH62_05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05780 CP118825.1 Protein Homology CDS 1149720 1150496 . + 0 ID=cds-WHI78351.1;Parent=gene-PYH62_05780;Dbxref=NCBI_GP:WHI78351.1;Name=WHI78351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455284.1;locus_tag=PYH62_05780;product=metal ABC transporter ATP-binding protein;protein_id=WHI78351.1;transl_table=11 CP118825.1 Genbank gene 1150553 1151398 . + . ID=gene-PYH62_05785;Name=PYH62_05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05785 CP118825.1 Protein Homology CDS 1150553 1151398 . + 0 ID=cds-WHI78352.1;Parent=gene-PYH62_05785;Dbxref=NCBI_GP:WHI78352.1;Name=WHI78352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176228.1;locus_tag=PYH62_05785;product=metal ABC transporter permease;protein_id=WHI78352.1;transl_table=11 CP118825.1 Genbank gene 1151402 1151824 . + . ID=gene-PYH62_05790;Name=PYH62_05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05790 CP118825.1 Protein Homology CDS 1151402 1151824 . + 0 ID=cds-WHI78353.1;Parent=gene-PYH62_05790;Dbxref=NCBI_GP:WHI78353.1;Name=WHI78353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455286.1;locus_tag=PYH62_05790;product=Fur family transcriptional regulator;protein_id=WHI78353.1;transl_table=11 CP118825.1 Genbank gene 1152054 1152656 . + . ID=gene-PYH62_05795;Name=PYH62_05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05795 CP118825.1 Protein Homology CDS 1152054 1152656 . + 0 ID=cds-WHI78354.1;Parent=gene-PYH62_05795;Dbxref=NCBI_GP:WHI78354.1;Name=WHI78354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500165.1;locus_tag=PYH62_05795;product=superoxide dismutase;protein_id=WHI78354.1;transl_table=11 CP118825.1 Genbank gene 1152787 1154832 . + . ID=gene-PYH62_05800;Name=PYH62_05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05800 CP118825.1 Protein Homology CDS 1152787 1154832 . + 0 ID=cds-WHI78355.1;Parent=gene-PYH62_05800;Dbxref=NCBI_GP:WHI78355.1;Name=WHI78355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176230.1;locus_tag=PYH62_05800;product=penicillin-binding protein 2;protein_id=WHI78355.1;transl_table=11 CP118825.1 Genbank gene 1154955 1155104 . + . ID=gene-PYH62_05805;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=PYH62_05805 CP118825.1 Protein Homology CDS 1154955 1155104 . + 0 ID=cds-WHI78356.1;Parent=gene-PYH62_05805;Dbxref=NCBI_GP:WHI78356.1;Name=WHI78356.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=PYH62_05805;product=50S ribosomal protein L33;protein_id=WHI78356.1;transl_table=11 CP118825.1 Genbank gene 1155315 1155866 . + . ID=gene-PYH62_05810;Name=PYH62_05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05810 CP118825.1 Protein Homology CDS 1155315 1155866 . + 0 ID=cds-WHI78357.1;Parent=gene-PYH62_05810;Dbxref=NCBI_GP:WHI78357.1;Name=WHI78357.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176231.1;locus_tag=PYH62_05810;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WHI78357.1;transl_table=11 CP118825.1 Genbank gene 1155866 1157323 . + . ID=gene-PYH62_05815;Name=PYH62_05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05815 CP118825.1 Protein Homology CDS 1155866 1157323 . + 0 ID=cds-WHI78358.1;Parent=gene-PYH62_05815;Dbxref=NCBI_GP:WHI78358.1;Name=WHI78358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832757.1;locus_tag=PYH62_05815;product=rhomboid family intramembrane serine protease;protein_id=WHI78358.1;transl_table=11 CP118825.1 Genbank gene 1157307 1157510 . + . ID=gene-PYH62_05820;Name=PYH62_05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05820 CP118825.1 Protein Homology CDS 1157307 1157510 . + 0 ID=cds-WHI78359.1;Parent=gene-PYH62_05820;Dbxref=NCBI_GP:WHI78359.1;Name=WHI78359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500159.1;locus_tag=PYH62_05820;product=YqgQ family protein;protein_id=WHI78359.1;transl_table=11 CP118825.1 Genbank gene 1157507 1158493 . + . ID=gene-PYH62_05825;Name=PYH62_05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05825 CP118825.1 Protein Homology CDS 1157507 1158493 . + 0 ID=cds-WHI78360.1;Parent=gene-PYH62_05825;Dbxref=NCBI_GP:WHI78360.1;Name=WHI78360.1;Ontology_term=GO:0006096,GO:0004340;gbkey=CDS;go_function=glucokinase activity|0004340||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500158.1;locus_tag=PYH62_05825;product=ROK family glucokinase;protein_id=WHI78360.1;transl_table=11 CP118825.1 Genbank gene 1158493 1158816 . + . ID=gene-PYH62_05830;Name=PYH62_05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05830 CP118825.1 Protein Homology CDS 1158493 1158816 . + 0 ID=cds-WHI78361.1;Parent=gene-PYH62_05830;Dbxref=NCBI_GP:WHI78361.1;Name=WHI78361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449910.1;locus_tag=PYH62_05830;product=MTH1187 family thiamine-binding protein;protein_id=WHI78361.1;transl_table=11 CP118825.1 Genbank gene 1158818 1159444 . + . ID=gene-PYH62_05835;Name=PYH62_05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05835 CP118825.1 Protein Homology CDS 1158818 1159444 . + 0 ID=cds-WHI78362.1;Parent=gene-PYH62_05835;Dbxref=NCBI_GP:WHI78362.1;Name=WHI78362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455290.1;locus_tag=PYH62_05835;product=MBL fold metallo-hydrolase;protein_id=WHI78362.1;transl_table=11 CP118825.1 Genbank pseudogene 1159495 1160470 . + . ID=gene-PYH62_05840;Name=comGA;gbkey=Gene;gene=comGA;gene_biotype=pseudogene;locus_tag=PYH62_05840;pseudo=true CP118825.1 Protein Homology CDS 1159495 1160470 . + 0 ID=cds-PYH62_05840;Parent=gene-PYH62_05840;Note=frameshifted;gbkey=CDS;gene=comGA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464658.1;locus_tag=PYH62_05840;product=competence type IV pilus ATPase ComGA;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1160448 1161506 . + . ID=gene-PYH62_05845;Name=comGB;gbkey=Gene;gene=comGB;gene_biotype=protein_coding;locus_tag=PYH62_05845 CP118825.1 Protein Homology CDS 1160448 1161506 . + 0 ID=cds-WHI80244.1;Parent=gene-PYH62_05845;Dbxref=NCBI_GP:WHI80244.1;Name=WHI80244.1;gbkey=CDS;gene=comGB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449796.1;locus_tag=PYH62_05845;product=competence type IV pilus assembly protein ComGB;protein_id=WHI80244.1;transl_table=11 CP118825.1 Genbank gene 1161526 1161837 . + . ID=gene-PYH62_05850;Name=comGC;gbkey=Gene;gene=comGC;gene_biotype=protein_coding;locus_tag=PYH62_05850 CP118825.1 Protein Homology CDS 1161526 1161837 . + 0 ID=cds-WHI78363.1;Parent=gene-PYH62_05850;Dbxref=NCBI_GP:WHI78363.1;Name=WHI78363.1;gbkey=CDS;gene=comGC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176238.1;locus_tag=PYH62_05850;product=competence type IV pilus major pilin ComGC;protein_id=WHI78363.1;transl_table=11 CP118825.1 Genbank gene 1161827 1162261 . + . ID=gene-PYH62_05855;Name=comGD;gbkey=Gene;gene=comGD;gene_biotype=protein_coding;locus_tag=PYH62_05855 CP118825.1 Protein Homology CDS 1161827 1162261 . + 0 ID=cds-WHI78364.1;Parent=gene-PYH62_05855;Dbxref=NCBI_GP:WHI78364.1;Name=WHI78364.1;gbkey=CDS;gene=comGD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176239.1;locus_tag=PYH62_05855;product=competence type IV pilus minor pilin ComGD;protein_id=WHI78364.1;transl_table=11 CP118825.1 Genbank gene 1162453 1162950 . + . ID=gene-PYH62_05860;Name=PYH62_05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05860 CP118825.1 Protein Homology CDS 1162453 1162950 . + 0 ID=cds-WHI78365.1;Parent=gene-PYH62_05860;Dbxref=NCBI_GP:WHI78365.1;Name=WHI78365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176240.1;locus_tag=PYH62_05860;product=type IV pilus minor pilin ComGF family protein;protein_id=WHI78365.1;transl_table=11 CP118825.1 Genbank gene 1163115 1163624 . + . ID=gene-PYH62_05865;Name=PYH62_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05865 CP118825.1 Protein Homology CDS 1163115 1163624 . + 0 ID=cds-WHI78366.1;Parent=gene-PYH62_05865;Dbxref=NCBI_GP:WHI78366.1;Name=WHI78366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449809.1;locus_tag=PYH62_05865;product=shikimate kinase;protein_id=WHI78366.1;transl_table=11 CP118825.1 cmsearch riboswitch 1163621 1163742 . + . ID=id-CP118825.1:1163621..1163742;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch CP118825.1 Genbank gene 1163819 1164910 . + . ID=gene-PYH62_05870;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=PYH62_05870 CP118825.1 Protein Homology CDS 1163819 1164910 . + 0 ID=cds-WHI78367.1;Parent=gene-PYH62_05870;Dbxref=NCBI_GP:WHI78367.1;Name=WHI78367.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500147.1;locus_tag=PYH62_05870;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WHI78367.1;transl_table=11 CP118825.1 Genbank gene 1164927 1166279 . + . ID=gene-PYH62_05875;Name=gcvPA;gbkey=Gene;gene=gcvPA;gene_biotype=protein_coding;locus_tag=PYH62_05875 CP118825.1 Protein Homology CDS 1164927 1166279 . + 0 ID=cds-WHI78368.1;Parent=gene-PYH62_05875;Dbxref=NCBI_GP:WHI78368.1;Name=WHI78368.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPA;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469339.1;locus_tag=PYH62_05875;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPA;protein_id=WHI78368.1;transl_table=11 CP118825.1 Genbank gene 1166266 1167744 . + . ID=gene-PYH62_05880;Name=gcvPB;gbkey=Gene;gene=gcvPB;gene_biotype=protein_coding;locus_tag=PYH62_05880 CP118825.1 Protein Homology CDS 1166266 1167744 . + 0 ID=cds-WHI78369.1;Parent=gene-PYH62_05880;Dbxref=NCBI_GP:WHI78369.1;Name=WHI78369.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPB;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455299.1;locus_tag=PYH62_05880;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPB;protein_id=WHI78369.1;transl_table=11 CP118825.1 Genbank gene 1167829 1168215 . - . ID=gene-PYH62_05885;Name=PYH62_05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05885 CP118825.1 Protein Homology CDS 1167829 1168215 . - 0 ID=cds-WHI78370.1;Parent=gene-PYH62_05885;Dbxref=NCBI_GP:WHI78370.1;Name=WHI78370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500144.1;locus_tag=PYH62_05885;product=rhodanese-like domain-containing protein;protein_id=WHI78370.1;transl_table=11 CP118825.1 Genbank gene 1168366 1169196 . + . ID=gene-PYH62_05890;Name=PYH62_05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05890 CP118825.1 Protein Homology CDS 1168366 1169196 . + 0 ID=cds-WHI78371.1;Parent=gene-PYH62_05890;Dbxref=NCBI_GP:WHI78371.1;Name=WHI78371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500143.1;locus_tag=PYH62_05890;product=biotin/lipoate A/B protein ligase family protein;protein_id=WHI78371.1;transl_table=11 CP118825.1 Genbank gene 1169248 1169463 . - . ID=gene-PYH62_05895;Name=PYH62_05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05895 CP118825.1 Protein Homology CDS 1169248 1169463 . - 0 ID=cds-WHI78372.1;Parent=gene-PYH62_05895;Dbxref=NCBI_GP:WHI78372.1;Name=WHI78372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459027.1;locus_tag=PYH62_05895;product=SA1362 family protein;protein_id=WHI78372.1;transl_table=11 CP118825.1 Genbank gene 1169480 1170061 . - . ID=gene-PYH62_05900;Name=PYH62_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05900 CP118825.1 Protein Homology CDS 1169480 1170061 . - 0 ID=cds-WHI78373.1;Parent=gene-PYH62_05900;Dbxref=NCBI_GP:WHI78373.1;Name=WHI78373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176248.1;locus_tag=PYH62_05900;product=hypothetical protein;protein_id=WHI78373.1;transl_table=11 CP118825.1 Genbank gene 1170162 1171220 . + . ID=gene-PYH62_05905;Name=PYH62_05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05905 CP118825.1 Protein Homology CDS 1170162 1171220 . + 0 ID=cds-WHI78374.1;Parent=gene-PYH62_05905;Dbxref=NCBI_GP:WHI78374.1;Name=WHI78374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176249.1;locus_tag=PYH62_05905;product=Xaa-Pro peptidase family protein;protein_id=WHI78374.1;transl_table=11 CP118825.1 Genbank gene 1171248 1171805 . + . ID=gene-PYH62_05910;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=PYH62_05910 CP118825.1 Protein Homology CDS 1171248 1171805 . + 0 ID=cds-WHI78375.1;Parent=gene-PYH62_05910;Dbxref=NCBI_GP:WHI78375.1;Name=WHI78375.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275683.1;locus_tag=PYH62_05910;product=elongation factor P;protein_id=WHI78375.1;transl_table=11 CP118825.1 Genbank gene 1172064 1172540 . + . ID=gene-PYH62_05915;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=PYH62_05915 CP118825.1 Protein Homology CDS 1172064 1172540 . + 0 ID=cds-WHI78376.1;Parent=gene-PYH62_05915;Dbxref=NCBI_GP:WHI78376.1;Name=WHI78376.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473583.1;locus_tag=PYH62_05915;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WHI78376.1;transl_table=11 CP118825.1 Genbank gene 1172540 1173895 . + . ID=gene-PYH62_05920;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=PYH62_05920 CP118825.1 Protein Homology CDS 1172540 1173895 . + 0 ID=cds-WHI78377.1;Parent=gene-PYH62_05920;Dbxref=NCBI_GP:WHI78377.1;Name=WHI78377.1;Ontology_term=GO:0006633,GO:0003989,GO:0004075,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,biotin carboxylase activity|0004075||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449758.1;locus_tag=PYH62_05920;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WHI78377.1;transl_table=11 CP118825.1 Genbank gene 1173908 1174267 . + . ID=gene-PYH62_05925;Name=PYH62_05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05925 CP118825.1 Protein Homology CDS 1173908 1174267 . + 0 ID=cds-WHI78378.1;Parent=gene-PYH62_05925;Dbxref=NCBI_GP:WHI78378.1;Name=WHI78378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455302.1;locus_tag=PYH62_05925;product=Asp23/Gls24 family envelope stress response protein;protein_id=WHI78378.1;transl_table=11 CP118825.1 Genbank gene 1174300 1174686 . + . ID=gene-PYH62_05930;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=PYH62_05930 CP118825.1 Protein Homology CDS 1174300 1174686 . + 0 ID=cds-WHI78379.1;Parent=gene-PYH62_05930;Dbxref=NCBI_GP:WHI78379.1;Name=WHI78379.1;Ontology_term=GO:0006355;gbkey=CDS;gene=nusB;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303036.1;locus_tag=PYH62_05930;product=transcription antitermination factor NusB;protein_id=WHI78379.1;transl_table=11 CP118825.1 Genbank gene 1174707 1176044 . + . ID=gene-PYH62_05935;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=PYH62_05935 CP118825.1 Protein Homology CDS 1174707 1176044 . + 0 ID=cds-WHI78380.1;Parent=gene-PYH62_05935;Dbxref=NCBI_GP:WHI78380.1;Name=WHI78380.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275688.1;locus_tag=PYH62_05935;product=exodeoxyribonuclease VII large subunit;protein_id=WHI78380.1;transl_table=11 CP118825.1 Genbank gene 1176037 1176267 . + . ID=gene-PYH62_05940;Name=PYH62_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05940 CP118825.1 Protein Homology CDS 1176037 1176267 . + 0 ID=cds-WHI78381.1;Parent=gene-PYH62_05940;Dbxref=NCBI_GP:WHI78381.1;Name=WHI78381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275689.1;locus_tag=PYH62_05940;product=exodeoxyribonuclease VII small subunit;protein_id=WHI78381.1;transl_table=11 CP118825.1 Genbank gene 1176245 1177126 . + . ID=gene-PYH62_05945;Name=PYH62_05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05945 CP118825.1 Protein Homology CDS 1176245 1177126 . + 0 ID=cds-WHI78382.1;Parent=gene-PYH62_05945;Dbxref=NCBI_GP:WHI78382.1;Name=WHI78382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503987.1;locus_tag=PYH62_05945;product=polyprenyl synthetase family protein;protein_id=WHI78382.1;transl_table=11 CP118825.1 Genbank gene 1177388 1177840 . + . ID=gene-PYH62_05950;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=PYH62_05950 CP118825.1 Protein Homology CDS 1177388 1177840 . + 0 ID=cds-WHI78383.1;Parent=gene-PYH62_05950;Dbxref=NCBI_GP:WHI78383.1;Name=WHI78383.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500131.1;locus_tag=PYH62_05950;product=transcriptional regulator ArgR;protein_id=WHI78383.1;transl_table=11 CP118825.1 Genbank gene 1177856 1179529 . + . ID=gene-PYH62_05955;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=PYH62_05955 CP118825.1 Protein Homology CDS 1177856 1179529 . + 0 ID=cds-WHI78384.1;Parent=gene-PYH62_05955;Dbxref=NCBI_GP:WHI78384.1;Name=WHI78384.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524,GO:0005737;gbkey=CDS;gene=recN;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488543.1;locus_tag=PYH62_05955;product=DNA repair protein RecN;protein_id=WHI78384.1;transl_table=11 CP118825.1 Genbank gene 1179673 1181097 . + . ID=gene-PYH62_05960;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=PYH62_05960 CP118825.1 Protein Homology CDS 1179673 1181097 . + 0 ID=cds-WHI78385.1;Parent=gene-PYH62_05960;Dbxref=NCBI_GP:WHI78385.1;Name=WHI78385.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662867.1;locus_tag=PYH62_05960;product=dihydrolipoyl dehydrogenase;protein_id=WHI78385.1;transl_table=11 CP118825.1 Genbank gene 1181111 1182112 . + . ID=gene-PYH62_05965;Name=PYH62_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05965 CP118825.1 Protein Homology CDS 1181111 1182112 . + 0 ID=cds-WHI78386.1;Parent=gene-PYH62_05965;Dbxref=NCBI_GP:WHI78386.1;Name=WHI78386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012083651.1;locus_tag=PYH62_05965;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WHI78386.1;transl_table=11 CP118825.1 Genbank gene 1182105 1183088 . + . ID=gene-PYH62_05970;Name=PYH62_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05970 CP118825.1 Protein Homology CDS 1182105 1183088 . + 0 ID=cds-WHI78387.1;Parent=gene-PYH62_05970;Dbxref=NCBI_GP:WHI78387.1;Name=WHI78387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500127.1;locus_tag=PYH62_05970;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WHI78387.1;transl_table=11 CP118825.1 Genbank gene 1183101 1184387 . + . ID=gene-PYH62_05975;Name=PYH62_05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05975 CP118825.1 Protein Homology CDS 1183101 1184387 . + 0 ID=cds-WHI78388.1;Parent=gene-PYH62_05975;Dbxref=NCBI_GP:WHI78388.1;Name=WHI78388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002496868.1;locus_tag=PYH62_05975;product=dihydrolipoamide acetyltransferase family protein;protein_id=WHI78388.1;transl_table=11 CP118825.1 Genbank pseudogene 1184480 1184918 . + . ID=gene-PYH62_05980;Name=PYH62_05980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_05980;pseudo=true CP118825.1 Protein Homology CDS 1184480 1184918 . + 0 ID=cds-PYH62_05980;Parent=gene-PYH62_05980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500125.1;locus_tag=PYH62_05980;product=BrxA/BrxB family bacilliredoxin;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1184931 1185908 . + . ID=gene-PYH62_05985;Name=PYH62_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05985 CP118825.1 Protein Homology CDS 1184931 1185908 . + 0 ID=cds-WHI78389.1;Parent=gene-PYH62_05985;Dbxref=NCBI_GP:WHI78389.1;Name=WHI78389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476807.1;locus_tag=PYH62_05985;product=aromatic acid exporter family protein;protein_id=WHI78389.1;transl_table=11 CP118825.1 Genbank gene 1186060 1186155 . - . ID=gene-PYH62_05990;Name=prli42;gbkey=Gene;gene=prli42;gene_biotype=protein_coding;locus_tag=PYH62_05990 CP118825.1 Protein Homology CDS 1186060 1186155 . - 0 ID=cds-WHI78390.1;Parent=gene-PYH62_05990;Dbxref=NCBI_GP:WHI78390.1;Name=WHI78390.1;gbkey=CDS;gene=prli42;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493579.1;locus_tag=PYH62_05990;product=stressosome-associated protein Prli42;protein_id=WHI78390.1;transl_table=11 CP118825.1 Genbank gene 1186324 1187448 . + . ID=gene-PYH62_05995;Name=PYH62_05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_05995 CP118825.1 Protein Homology CDS 1186324 1187448 . + 0 ID=cds-WHI78391.1;Parent=gene-PYH62_05995;Dbxref=NCBI_GP:WHI78391.1;Name=WHI78391.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835222.1;locus_tag=PYH62_05995;product=M20/M25/M40 family metallo-hydrolase;protein_id=WHI78391.1;transl_table=11 CP118825.1 Genbank gene 1187526 1188932 . + . ID=gene-PYH62_06000;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=PYH62_06000 CP118825.1 Protein Homology CDS 1187526 1188932 . + 0 ID=cds-WHI78392.1;Parent=gene-PYH62_06000;Dbxref=NCBI_GP:WHI78392.1;Name=WHI78392.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500120.1;locus_tag=PYH62_06000;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WHI78392.1;transl_table=11 CP118825.1 Genbank gene 1189293 1190939 . + . ID=gene-PYH62_06005;Name=PYH62_06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06005 CP118825.1 Protein Homology CDS 1189293 1190939 . + 0 ID=cds-WHI78393.1;Parent=gene-PYH62_06005;Dbxref=NCBI_GP:WHI78393.1;Name=WHI78393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835223.1;locus_tag=PYH62_06005;product=alpha-glucosidase;protein_id=WHI78393.1;transl_table=11 CP118825.1 Genbank gene 1190993 1191859 . - . ID=gene-PYH62_06010;Name=PYH62_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06010 CP118825.1 Protein Homology CDS 1190993 1191859 . - 0 ID=cds-WHI78394.1;Parent=gene-PYH62_06010;Dbxref=NCBI_GP:WHI78394.1;Name=WHI78394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014373838.1;locus_tag=PYH62_06010;product=AraC family transcriptional regulator;protein_id=WHI78394.1;transl_table=11 CP118825.1 Genbank gene 1192071 1193555 . - . ID=gene-PYH62_06015;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=PYH62_06015 CP118825.1 Protein Homology CDS 1192071 1193555 . - 0 ID=cds-WHI78395.1;Parent=gene-PYH62_06015;Dbxref=NCBI_GP:WHI78395.1;Name=WHI78395.1;Ontology_term=GO:0006098,GO:0004345;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500114.1;locus_tag=PYH62_06015;product=glucose-6-phosphate dehydrogenase;protein_id=WHI78395.1;transl_table=11 CP118825.1 Genbank gene 1193798 1194718 . + . ID=gene-PYH62_06020;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=PYH62_06020 CP118825.1 Protein Homology CDS 1193798 1194718 . + 0 ID=cds-WHI78396.1;Parent=gene-PYH62_06020;Dbxref=NCBI_GP:WHI78396.1;Name=WHI78396.1;Ontology_term=GO:0042779,GO:0016891;gbkey=CDS;gene=rnz;go_function=endoribonuclease activity%2C producing 5'-phosphomonoesters|0016891||IEA;go_process=tRNA 3'-trailer cleavage|0042779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176268.1;locus_tag=PYH62_06020;product=ribonuclease Z;protein_id=WHI78396.1;transl_table=11 CP118825.1 Genbank gene 1194813 1195628 . - . ID=gene-PYH62_06025;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=PYH62_06025 CP118825.1 Protein Homology CDS 1194813 1195628 . - 0 ID=cds-WHI78397.1;Parent=gene-PYH62_06025;Dbxref=NCBI_GP:WHI78397.1;Name=WHI78397.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002485765.1;locus_tag=PYH62_06025;product=pyrroline-5-carboxylate reductase;protein_id=WHI78397.1;transl_table=11 CP118825.1 Genbank gene 1195736 1196491 . + . ID=gene-PYH62_06030;Name=PYH62_06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06030 CP118825.1 Protein Homology CDS 1195736 1196491 . + 0 ID=cds-WHI80245.1;Parent=gene-PYH62_06030;Dbxref=NCBI_GP:WHI80245.1;Name=WHI80245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002475195.1;locus_tag=PYH62_06030;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WHI80245.1;transl_table=11 CP118825.1 Genbank gene 1196588 1197496 . - . ID=gene-PYH62_06035;Name=PYH62_06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06035 CP118825.1 Protein Homology CDS 1196588 1197496 . - 0 ID=cds-WHI78398.1;Parent=gene-PYH62_06035;Dbxref=NCBI_GP:WHI78398.1;Name=WHI78398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464198.1;locus_tag=PYH62_06035;product=aldo/keto reductase;protein_id=WHI78398.1;transl_table=11 CP118825.1 Genbank gene 1197578 1198120 . + . ID=gene-PYH62_06040;Name=PYH62_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06040 CP118825.1 Protein Homology CDS 1197578 1198120 . + 0 ID=cds-WHI78399.1;Parent=gene-PYH62_06040;Dbxref=NCBI_GP:WHI78399.1;Name=WHI78399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468381.1;locus_tag=PYH62_06040;product=NUDIX hydrolase;protein_id=WHI78399.1;transl_table=11 CP118825.1 Genbank gene 1198221 1198667 . + . ID=gene-PYH62_06045;Name=PYH62_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06045 CP118825.1 Protein Homology CDS 1198221 1198667 . + 0 ID=cds-WHI78400.1;Parent=gene-PYH62_06045;Dbxref=NCBI_GP:WHI78400.1;Name=WHI78400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176273.1;locus_tag=PYH62_06045;product=Fur family transcriptional regulator;protein_id=WHI78400.1;transl_table=11 CP118825.1 Genbank gene 1198832 1199719 . + . ID=gene-PYH62_06050;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=PYH62_06050 CP118825.1 Protein Homology CDS 1198832 1199719 . + 0 ID=cds-WHI78401.1;Parent=gene-PYH62_06050;Dbxref=NCBI_GP:WHI78401.1;Name=WHI78401.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500106.1;locus_tag=PYH62_06050;product=site-specific tyrosine recombinase XerD;protein_id=WHI78401.1;transl_table=11 CP118825.1 Genbank gene 1199745 1200248 . - . ID=gene-PYH62_06055;Name=PYH62_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06055 CP118825.1 Protein Homology CDS 1199745 1200248 . - 0 ID=cds-WHI78402.1;Parent=gene-PYH62_06055;Dbxref=NCBI_GP:WHI78402.1;Name=WHI78402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835225.1;locus_tag=PYH62_06055;product=DUF309 domain-containing protein;protein_id=WHI78402.1;transl_table=11 CP118825.1 Genbank gene 1200347 1201078 . + . ID=gene-PYH62_06060;Name=PYH62_06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06060 CP118825.1 Protein Homology CDS 1200347 1201078 . + 0 ID=cds-WHI78403.1;Parent=gene-PYH62_06060;Dbxref=NCBI_GP:WHI78403.1;Name=WHI78403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500104.1;locus_tag=PYH62_06060;product=segregation/condensation protein A;protein_id=WHI78403.1;transl_table=11 CP118825.1 Genbank gene 1201071 1201604 . + . ID=gene-PYH62_06065;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=PYH62_06065 CP118825.1 Protein Homology CDS 1201071 1201604 . + 0 ID=cds-WHI78404.1;Parent=gene-PYH62_06065;Dbxref=NCBI_GP:WHI78404.1;Name=WHI78404.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449749.1;locus_tag=PYH62_06065;product=SMC-Scp complex subunit ScpB;protein_id=WHI78404.1;transl_table=11 CP118825.1 Genbank gene 1201606 1202343 . + . ID=gene-PYH62_06070;Name=PYH62_06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06070 CP118825.1 Protein Homology CDS 1201606 1202343 . + 0 ID=cds-WHI78405.1;Parent=gene-PYH62_06070;Dbxref=NCBI_GP:WHI78405.1;Name=WHI78405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455315.1;locus_tag=PYH62_06070;product=pseudouridine synthase;protein_id=WHI78405.1;transl_table=11 CP118825.1 Genbank gene 1202550 1203275 . + . ID=gene-PYH62_06075;Name=PYH62_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06075 CP118825.1 Protein Homology CDS 1202550 1203275 . + 0 ID=cds-WHI78406.1;Parent=gene-PYH62_06075;Dbxref=NCBI_GP:WHI78406.1;Name=WHI78406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500101.1;locus_tag=PYH62_06075;product=response regulator transcription factor;protein_id=WHI78406.1;transl_table=11 CP118825.1 Genbank gene 1203259 1205025 . + . ID=gene-PYH62_06080;Name=PYH62_06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06080 CP118825.1 Protein Homology CDS 1203259 1205025 . + 0 ID=cds-WHI80246.1;Parent=gene-PYH62_06080;Dbxref=NCBI_GP:WHI80246.1;Name=WHI80246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455316.1;locus_tag=PYH62_06080;product=ATP-binding protein;protein_id=WHI80246.1;transl_table=11 CP118825.1 cmsearch riboswitch 1205271 1205398 . + . ID=id-CP118825.1:1205271..1205398;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch CP118825.1 Genbank gene 1205463 1206008 . + . ID=gene-PYH62_06085;Name=PYH62_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06085 CP118825.1 Protein Homology CDS 1205463 1206008 . + 0 ID=cds-WHI78407.1;Parent=gene-PYH62_06085;Dbxref=NCBI_GP:WHI78407.1;Name=WHI78407.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830988.1;locus_tag=PYH62_06085;product=ECF transporter S component;protein_id=WHI78407.1;transl_table=11 CP118825.1 Genbank gene 1206092 1206340 . - . ID=gene-PYH62_06090;Name=PYH62_06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06090 CP118825.1 Protein Homology CDS 1206092 1206340 . - 0 ID=cds-WHI78408.1;Parent=gene-PYH62_06090;Dbxref=NCBI_GP:WHI78408.1;Name=WHI78408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449743.1;locus_tag=PYH62_06090;product=ferredoxin;protein_id=WHI78408.1;transl_table=11 CP118825.1 Genbank gene 1206437 1207402 . + . ID=gene-PYH62_06095;Name=PYH62_06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06095 CP118825.1 Protein Homology CDS 1206437 1207402 . + 0 ID=cds-WHI78409.1;Parent=gene-PYH62_06095;Dbxref=NCBI_GP:WHI78409.1;Name=WHI78409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449747.1;locus_tag=PYH62_06095;product=helix-turn-helix domain-containing protein;protein_id=WHI78409.1;transl_table=11 CP118825.1 Genbank gene 1207383 1208762 . + . ID=gene-PYH62_06100;Name=PYH62_06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06100 CP118825.1 Protein Homology CDS 1207383 1208762 . + 0 ID=cds-WHI78410.1;Parent=gene-PYH62_06100;Dbxref=NCBI_GP:WHI78410.1;Name=WHI78410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176282.1;locus_tag=PYH62_06100;product=ATP-dependent DNA helicase;protein_id=WHI78410.1;transl_table=11 CP118825.1 Genbank gene 1208910 1209719 . + . ID=gene-PYH62_06105;Name=PYH62_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06105 CP118825.1 GeneMarkS-2+ CDS 1208910 1209719 . + 0 ID=cds-WHI78411.1;Parent=gene-PYH62_06105;Dbxref=NCBI_GP:WHI78411.1;Name=WHI78411.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_06105;product=hypothetical protein;protein_id=WHI78411.1;transl_table=11 CP118825.1 Genbank gene 1209694 1210440 . + . ID=gene-PYH62_06110;Name=PYH62_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06110 CP118825.1 Protein Homology CDS 1209694 1210440 . + 0 ID=cds-WHI78412.1;Parent=gene-PYH62_06110;Dbxref=NCBI_GP:WHI78412.1;Name=WHI78412.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013630.2;locus_tag=PYH62_06110;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WHI78412.1;transl_table=11 CP118825.1 Genbank gene 1210591 1211577 . + . ID=gene-PYH62_06115;Name=PYH62_06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06115 CP118825.1 Protein Homology CDS 1210591 1211577 . + 0 ID=cds-WHI78413.1;Parent=gene-PYH62_06115;Dbxref=NCBI_GP:WHI78413.1;Name=WHI78413.1;Ontology_term=GO:0006790,GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500017.1;locus_tag=PYH62_06115;product=YpdA family putative bacillithiol disulfide reductase;protein_id=WHI78413.1;transl_table=11 CP118825.1 Genbank gene 1211640 1212608 . - . ID=gene-PYH62_06120;Name=PYH62_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06120 CP118825.1 Protein Homology CDS 1211640 1212608 . - 0 ID=cds-WHI78414.1;Parent=gene-PYH62_06120;Dbxref=NCBI_GP:WHI78414.1;Name=WHI78414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835231.1;locus_tag=PYH62_06120;product=asparaginase;protein_id=WHI78414.1;transl_table=11 CP118825.1 Genbank gene 1212684 1213340 . + . ID=gene-PYH62_06125;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=PYH62_06125 CP118825.1 Protein Homology CDS 1212684 1213340 . + 0 ID=cds-WHI78415.1;Parent=gene-PYH62_06125;Dbxref=NCBI_GP:WHI78415.1;Name=WHI78415.1;Ontology_term=GO:0015949,GO:0004127;gbkey=CDS;gene=cmk;go_function=cytidylate kinase activity|0004127||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275729.1;locus_tag=PYH62_06125;product=(d)CMP kinase;protein_id=WHI78415.1;transl_table=11 CP118825.1 Genbank gene 1213651 1214829 . + . ID=gene-PYH62_06130;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=PYH62_06130 CP118825.1 Protein Homology CDS 1213651 1214829 . + 0 ID=cds-WHI78416.1;Parent=gene-PYH62_06130;Dbxref=NCBI_GP:WHI78416.1;Name=WHI78416.1;Ontology_term=GO:0003676;gbkey=CDS;gene=rpsA;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831057.1;locus_tag=PYH62_06130;product=30S ribosomal protein S1;protein_id=WHI78416.1;transl_table=11 CP118825.1 Genbank gene 1215014 1216324 . + . ID=gene-PYH62_06135;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=PYH62_06135 CP118825.1 Protein Homology CDS 1215014 1216324 . + 0 ID=cds-WHI78417.1;Parent=gene-PYH62_06135;Dbxref=NCBI_GP:WHI78417.1;Name=WHI78417.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167598.1;locus_tag=PYH62_06135;product=ribosome biogenesis GTPase Der;protein_id=WHI78417.1;transl_table=11 CP118825.1 Genbank gene 1216339 1217337 . + . ID=gene-PYH62_06140;Name=PYH62_06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06140 CP118825.1 Protein Homology CDS 1216339 1217337 . + 0 ID=cds-WHI78418.1;Parent=gene-PYH62_06140;Dbxref=NCBI_GP:WHI78418.1;Name=WHI78418.1;Ontology_term=GO:0046168,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate catabolic process|0046168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500009.1;locus_tag=PYH62_06140;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WHI78418.1;transl_table=11 CP118825.1 Genbank pseudogene 1217506 1217779 . + . ID=gene-PYH62_06145;Name=PYH62_06145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_06145;pseudo=true CP118825.1 Protein Homology CDS 1217506 1217779 . + 0 ID=cds-PYH62_06145;Parent=gene-PYH62_06145;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900354.1;locus_tag=PYH62_06145;product=HU family DNA-binding protein;pseudo=true;transl_table=11 CP118825.1 Genbank pseudogene 1217968 1218550 . + . ID=gene-PYH62_06150;Name=PYH62_06150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_06150;pseudo=true CP118825.1 Protein Homology CDS 1217968 1218550 . + 0 ID=cds-PYH62_06150;Parent=gene-PYH62_06150;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176290.1;locus_tag=PYH62_06150;product=heptaprenyl pyrophosphate synthase subunit A;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1218550 1219251 . + . ID=gene-PYH62_06155;Name=PYH62_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06155 CP118825.1 Protein Homology CDS 1218550 1219251 . + 0 ID=cds-WHI78419.1;Parent=gene-PYH62_06155;Dbxref=NCBI_GP:WHI78419.1;Name=WHI78419.1;Ontology_term=GO:0009234,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176291.1;locus_tag=PYH62_06155;product=demethylmenaquinone methyltransferase;protein_id=WHI78419.1;transl_table=11 CP118825.1 Genbank gene 1219281 1220237 . + . ID=gene-PYH62_06160;Name=PYH62_06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06160 CP118825.1 Protein Homology CDS 1219281 1220237 . + 0 ID=cds-WHI78420.1;Parent=gene-PYH62_06160;Dbxref=NCBI_GP:WHI78420.1;Name=WHI78420.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002463052.1;locus_tag=PYH62_06160;product=polyprenyl synthetase family protein;protein_id=WHI78420.1;transl_table=11 CP118825.1 Genbank gene 1220358 1220810 . + . ID=gene-PYH62_06165;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=PYH62_06165 CP118825.1 Protein Homology CDS 1220358 1220810 . + 0 ID=cds-WHI78421.1;Parent=gene-PYH62_06165;Dbxref=NCBI_GP:WHI78421.1;Name=WHI78421.1;Ontology_term=GO:0006165,GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;go_process=nucleoside diphosphate phosphorylation|0006165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176293.1;locus_tag=PYH62_06165;product=nucleoside-diphosphate kinase;protein_id=WHI78421.1;transl_table=11 CP118825.1 Genbank gene 1221040 1222206 . + . ID=gene-PYH62_06170;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=PYH62_06170 CP118825.1 Protein Homology CDS 1221040 1222206 . + 0 ID=cds-WHI78422.1;Parent=gene-PYH62_06170;Dbxref=NCBI_GP:WHI78422.1;Name=WHI78422.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_500001.1;locus_tag=PYH62_06170;product=chorismate synthase;protein_id=WHI78422.1;transl_table=11 CP118825.1 Genbank gene 1222245 1223309 . + . ID=gene-PYH62_06175;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=PYH62_06175 CP118825.1 Protein Homology CDS 1222245 1223309 . + 0 ID=cds-WHI78423.1;Parent=gene-PYH62_06175;Dbxref=NCBI_GP:WHI78423.1;Name=WHI78423.1;Ontology_term=GO:0009423,GO:0003856;gbkey=CDS;gene=aroB;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835238.1;locus_tag=PYH62_06175;product=3-dehydroquinate synthase;protein_id=WHI78423.1;transl_table=11 CP118825.1 Genbank gene 1223320 1224618 . + . ID=gene-PYH62_06180;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=PYH62_06180 CP118825.1 Protein Homology CDS 1223320 1224618 . + 0 ID=cds-WHI78424.1;Parent=gene-PYH62_06180;Dbxref=NCBI_GP:WHI78424.1;Name=WHI78424.1;Ontology_term=GO:0009423,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499999.1;locus_tag=PYH62_06180;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WHI78424.1;transl_table=11 CP118825.1 Genbank gene 1224625 1225869 . + . ID=gene-PYH62_06185;Name=PYH62_06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06185 CP118825.1 Protein Homology CDS 1224625 1225869 . + 0 ID=cds-WHI78425.1;Parent=gene-PYH62_06185;Dbxref=NCBI_GP:WHI78425.1;Name=WHI78425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449879.1;locus_tag=PYH62_06185;product=tetratricopeptide repeat protein;protein_id=WHI78425.1;transl_table=11 CP118825.1 Genbank gene 1225884 1226423 . + . ID=gene-PYH62_06190;Name=PYH62_06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06190 CP118825.1 Protein Homology CDS 1225884 1226423 . + 0 ID=cds-WHI78426.1;Parent=gene-PYH62_06190;Dbxref=NCBI_GP:WHI78426.1;Name=WHI78426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176298.1;locus_tag=PYH62_06190;product=YpiB family protein;protein_id=WHI78426.1;transl_table=11 CP118825.1 Genbank gene 1226449 1227066 . + . ID=gene-PYH62_06195;Name=PYH62_06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06195 CP118825.1 Protein Homology CDS 1226449 1227066 . + 0 ID=cds-WHI78427.1;Parent=gene-PYH62_06195;Dbxref=NCBI_GP:WHI78427.1;Name=WHI78427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449828.1;locus_tag=PYH62_06195;product=DUF1405 domain-containing protein;protein_id=WHI78427.1;transl_table=11 CP118825.1 Genbank gene 1227094 1227792 . + . ID=gene-PYH62_06200;Name=PYH62_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06200 CP118825.1 Protein Homology CDS 1227094 1227792 . + 0 ID=cds-WHI78428.1;Parent=gene-PYH62_06200;Dbxref=NCBI_GP:WHI78428.1;Name=WHI78428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449792.1;locus_tag=PYH62_06200;product=zinc metallopeptidase;protein_id=WHI78428.1;transl_table=11 CP118825.1 Genbank gene 1227993 1228310 . + . ID=gene-PYH62_06205;Name=PYH62_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06205 CP118825.1 Protein Homology CDS 1227993 1228310 . + 0 ID=cds-WHI80247.1;Parent=gene-PYH62_06205;Dbxref=NCBI_GP:WHI80247.1;Name=WHI80247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499994.1;locus_tag=PYH62_06205;product=nucleotide pyrophosphohydrolase;protein_id=WHI80247.1;transl_table=11 CP118825.1 Genbank gene 1228333 1229451 . + . ID=gene-PYH62_06210;Name=bshA;gbkey=Gene;gene=bshA;gene_biotype=protein_coding;locus_tag=PYH62_06210 CP118825.1 Protein Homology CDS 1228333 1229451 . + 0 ID=cds-WHI78429.1;Parent=gene-PYH62_06210;Dbxref=NCBI_GP:WHI78429.1;Name=WHI78429.1;Ontology_term=GO:0071793;gbkey=CDS;gene=bshA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449845.1;locus_tag=PYH62_06210;product=N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA;protein_id=WHI78429.1;transl_table=11 CP118825.1 Genbank gene 1229467 1230669 . + . ID=gene-PYH62_06215;Name=PYH62_06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06215 CP118825.1 Protein Homology CDS 1229467 1230669 . + 0 ID=cds-WHI78430.1;Parent=gene-PYH62_06215;Dbxref=NCBI_GP:WHI78430.1;Name=WHI78430.1;Ontology_term=GO:0001680,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275750.1;locus_tag=PYH62_06215;product=CCA tRNA nucleotidyltransferase;protein_id=WHI78430.1;transl_table=11 CP118825.1 Genbank pseudogene 1230656 1231628 . + . ID=gene-PYH62_06220;Name=PYH62_06220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_06220;pseudo=true CP118825.1 Protein Homology CDS 1230656 1231628 . + 0 ID=cds-PYH62_06220;Parent=gene-PYH62_06220;Note=frameshifted;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin-[acetyl-CoA-carboxylase] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473603.1;locus_tag=PYH62_06220;product=biotin--[acetyl-CoA-carboxylase] ligase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1231658 1234366 . + . ID=gene-PYH62_06225;Name=PYH62_06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06225 CP118825.1 Protein Homology CDS 1231658 1234366 . + 0 ID=cds-WHI78431.1;Parent=gene-PYH62_06225;Dbxref=NCBI_GP:WHI78431.1;Name=WHI78431.1;Ontology_term=GO:0006139,GO:0003676,GO:0004386,GO:0005524,GO:0016818;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835241.1;locus_tag=PYH62_06225;product=helicase C-terminal domain-containing protein;protein_id=WHI78431.1;transl_table=11 CP118825.1 Genbank gene 1234473 1235765 . + . ID=gene-PYH62_06230;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=PYH62_06230 CP118825.1 Protein Homology CDS 1234473 1235765 . + 0 ID=cds-WHI78432.1;Parent=gene-PYH62_06230;Dbxref=NCBI_GP:WHI78432.1;Name=WHI78432.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499989.1;locus_tag=PYH62_06230;product=asparagine--tRNA ligase;protein_id=WHI78432.1;transl_table=11 CP118825.1 Genbank gene 1235862 1236548 . + . ID=gene-PYH62_06235;Name=PYH62_06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06235 CP118825.1 Protein Homology CDS 1235862 1236548 . + 0 ID=cds-WHI78433.1;Parent=gene-PYH62_06235;Dbxref=NCBI_GP:WHI78433.1;Name=WHI78433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497888.1;locus_tag=PYH62_06235;product=DnaD domain-containing protein;protein_id=WHI78433.1;transl_table=11 CP118825.1 Genbank gene 1236538 1237209 . + . ID=gene-PYH62_06240;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=PYH62_06240 CP118825.1 Protein Homology CDS 1236538 1237209 . + 0 ID=cds-WHI78434.1;Parent=gene-PYH62_06240;Dbxref=NCBI_GP:WHI78434.1;Name=WHI78434.1;Ontology_term=GO:0006281,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488555.1;locus_tag=PYH62_06240;product=endonuclease III;protein_id=WHI78434.1;transl_table=11 CP118825.1 Genbank gene 1237202 1237537 . + . ID=gene-PYH62_06245;Name=PYH62_06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06245 CP118825.1 Protein Homology CDS 1237202 1237537 . + 0 ID=cds-WHI78435.1;Parent=gene-PYH62_06245;Dbxref=NCBI_GP:WHI78435.1;Name=WHI78435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455327.1;locus_tag=PYH62_06245;product=hypothetical protein;protein_id=WHI78435.1;transl_table=11 CP118825.1 Genbank pseudogene 1237631 1239998 . - . ID=gene-PYH62_06250;Name=PYH62_06250;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_06250;pseudo=true CP118825.1 Protein Homology CDS 1237631 1239998 . - 0 ID=cds-PYH62_06250;Parent=gene-PYH62_06250;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488536.1;locus_tag=PYH62_06250;product=transglycosylase domain-containing protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1239995 1240621 . - . ID=gene-PYH62_06255;Name=recU;gbkey=Gene;gene=recU;gene_biotype=protein_coding;locus_tag=PYH62_06255 CP118825.1 Protein Homology CDS 1239995 1240621 . - 0 ID=cds-WHI80248.1;Parent=gene-PYH62_06255;Dbxref=NCBI_GP:WHI80248.1;Name=WHI80248.1;gbkey=CDS;gene=recU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834552.1;locus_tag=PYH62_06255;product=Holliday junction resolvase RecU;protein_id=WHI80248.1;transl_table=11 CP118825.1 Genbank gene 1240883 1241236 . + . ID=gene-PYH62_06260;Name=PYH62_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06260 CP118825.1 Protein Homology CDS 1240883 1241236 . + 0 ID=cds-WHI78436.1;Parent=gene-PYH62_06260;Dbxref=NCBI_GP:WHI78436.1;Name=WHI78436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835244.1;locus_tag=PYH62_06260;product=DUF1798 family protein;protein_id=WHI78436.1;transl_table=11 CP118825.1 Genbank gene 1241233 1241796 . + . ID=gene-PYH62_06265;Name=PYH62_06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06265 CP118825.1 Protein Homology CDS 1241233 1241796 . + 0 ID=cds-WHI78437.1;Parent=gene-PYH62_06265;Dbxref=NCBI_GP:WHI78437.1;Name=WHI78437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275760.1;locus_tag=PYH62_06265;product=DUF1273 domain-containing protein;protein_id=WHI78437.1;transl_table=11 CP118825.1 Genbank gene 1241808 1242146 . + . ID=gene-PYH62_06270;Name=gpsB;gbkey=Gene;gene=gpsB;gene_biotype=protein_coding;locus_tag=PYH62_06270 CP118825.1 Protein Homology CDS 1241808 1242146 . + 0 ID=cds-WHI78438.1;Parent=gene-PYH62_06270;Dbxref=NCBI_GP:WHI78438.1;Name=WHI78438.1;gbkey=CDS;gene=gpsB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499980.1;locus_tag=PYH62_06270;product=cell division regulator GpsB;protein_id=WHI78438.1;transl_table=11 CP118825.1 Genbank gene 1242283 1242669 . + . ID=gene-PYH62_06275;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=PYH62_06275 CP118825.1 cmsearch RNase_P_RNA 1242283 1242669 . + . ID=rna-PYH62_06275;Parent=gene-PYH62_06275;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_06275;product=RNase P RNA component class B CP118825.1 cmsearch exon 1242283 1242669 . + . ID=exon-PYH62_06275-1;Parent=rna-PYH62_06275;Dbxref=RFAM:RF00011;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_06275;product=RNase P RNA component class B CP118825.1 Genbank gene 1242787 1243923 . + . ID=gene-PYH62_06280;Name=PYH62_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06280 CP118825.1 Protein Homology CDS 1242787 1243923 . + 0 ID=cds-WHI78439.1;Parent=gene-PYH62_06280;Dbxref=NCBI_GP:WHI78439.1;Name=WHI78439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449804.1;locus_tag=PYH62_06280;product=class I SAM-dependent RNA methyltransferase;protein_id=WHI78439.1;transl_table=11 CP118825.1 Genbank pseudogene 1244102 1244741 . + . ID=gene-PYH62_06285;Name=PYH62_06285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_06285;pseudo=true CP118825.1 Protein Homology CDS 1244102 1244741 . + 0 ID=cds-PYH62_06285;Parent=gene-PYH62_06285;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831317.1;locus_tag=PYH62_06285;product=SDR family oxidoreductase;pseudo=true;transl_table=11 CP118825.1 Genbank pseudogene 1244905 1248347 . + . ID=gene-PYH62_06290;Name=PYH62_06290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_06290;pseudo=true CP118825.1 Protein Homology CDS 1244905 1248347 . + 0 ID=cds-PYH62_06290;Parent=gene-PYH62_06290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455332.1;locus_tag=PYH62_06290;product=dynamin family protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1248362 1249246 . + . ID=gene-PYH62_06295;Name=PYH62_06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06295 CP118825.1 Protein Homology CDS 1248362 1249246 . + 0 ID=cds-WHI78440.1;Parent=gene-PYH62_06295;Dbxref=NCBI_GP:WHI78440.1;Name=WHI78440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449873.1;locus_tag=PYH62_06295;product=5'-3' exonuclease;protein_id=WHI78440.1;transl_table=11 CP118825.1 Genbank gene 1249310 1249711 . - . ID=gene-PYH62_06300;Name=PYH62_06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06300 CP118825.1 Protein Homology CDS 1249310 1249711 . - 0 ID=cds-WHI78441.1;Parent=gene-PYH62_06300;Dbxref=NCBI_GP:WHI78441.1;Name=WHI78441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449811.1;locus_tag=PYH62_06300;product=ribonuclease HI family protein;protein_id=WHI78441.1;transl_table=11 CP118825.1 Genbank pseudogene 1249811 1250516 . - . ID=gene-PYH62_06305;Name=PYH62_06305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_06305;pseudo=true CP118825.1 Protein Homology CDS 1249811 1250516 . - 0 ID=cds-PYH62_06305;Parent=gene-PYH62_06305;Note=frameshifted;Ontology_term=GO:1990397;gbkey=CDS;go_process=queuosine salvage|1990397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499965.1;locus_tag=PYH62_06305;product=queuosine precursor transporter;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1250716 1250910 . + . ID=gene-PYH62_06310;Name=PYH62_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06310 CP118825.1 Protein Homology CDS 1250716 1250910 . + 0 ID=cds-WHI78442.1;Parent=gene-PYH62_06310;Dbxref=NCBI_GP:WHI78442.1;Name=WHI78442.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439757.1;locus_tag=PYH62_06310;product=zinc-finger domain-containing protein;protein_id=WHI78442.1;transl_table=11 CP118825.1 Genbank gene 1250922 1251170 . + . ID=gene-PYH62_06315;Name=PYH62_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06315 CP118825.1 Protein Homology CDS 1250922 1251170 . + 0 ID=cds-WHI78443.1;Parent=gene-PYH62_06315;Dbxref=NCBI_GP:WHI78443.1;Name=WHI78443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449746.1;locus_tag=PYH62_06315;product=NifU N-terminal domain-containing protein;protein_id=WHI78443.1;transl_table=11 CP118825.1 Genbank gene 1251188 1252303 . + . ID=gene-PYH62_06320;Name=PYH62_06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06320 CP118825.1 Protein Homology CDS 1251188 1252303 . + 0 ID=cds-WHI78444.1;Parent=gene-PYH62_06320;Dbxref=NCBI_GP:WHI78444.1;Name=WHI78444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835247.1;locus_tag=PYH62_06320;product=conserved virulence factor C family protein;protein_id=WHI78444.1;transl_table=11 CP118825.1 Genbank pseudogene 1252317 1252752 . + . ID=gene-PYH62_06325;Name=PYH62_06325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_06325;pseudo=true CP118825.1 Protein Homology CDS 1252317 1252752 . + 0 ID=cds-PYH62_06325;Parent=gene-PYH62_06325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275773.1;locus_tag=PYH62_06325;product=BrxA/BrxB family bacilliredoxin;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1252934 1253890 . + . ID=gene-PYH62_06330;Name=PYH62_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06330 CP118825.1 Protein Homology CDS 1252934 1253890 . + 0 ID=cds-WHI78445.1;Parent=gene-PYH62_06330;Dbxref=NCBI_GP:WHI78445.1;Name=WHI78445.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499960.1;locus_tag=PYH62_06330;product=thymidylate synthase;protein_id=WHI78445.1;transl_table=11 CP118825.1 Genbank gene 1253932 1254408 . + . ID=gene-PYH62_06335;Name=PYH62_06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06335 CP118825.1 Protein Homology CDS 1253932 1254408 . + 0 ID=cds-WHI78446.1;Parent=gene-PYH62_06335;Dbxref=NCBI_GP:WHI78446.1;Name=WHI78446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835248.1;locus_tag=PYH62_06335;product=dihydrofolate reductase;protein_id=WHI78446.1;transl_table=11 CP118825.1 Genbank gene 1254430 1255275 . + . ID=gene-PYH62_06340;Name=PYH62_06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06340 CP118825.1 Protein Homology CDS 1254430 1255275 . + 0 ID=cds-WHI78447.1;Parent=gene-PYH62_06340;Dbxref=NCBI_GP:WHI78447.1;Name=WHI78447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449849.1;locus_tag=PYH62_06340;product=DegV family protein;protein_id=WHI78447.1;transl_table=11 CP118825.1 Genbank gene 1255377 1255904 . + . ID=gene-PYH62_06345;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=PYH62_06345 CP118825.1 Protein Homology CDS 1255377 1255904 . + 0 ID=cds-WHI78448.1;Parent=gene-PYH62_06345;Dbxref=NCBI_GP:WHI78448.1;Name=WHI78448.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453252.1;locus_tag=PYH62_06345;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WHI78448.1;transl_table=11 CP118825.1 Genbank gene 1255897 1256325 . + . ID=gene-PYH62_06350;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=PYH62_06350 CP118825.1 Protein Homology CDS 1255897 1256325 . + 0 ID=cds-WHI78449.1;Parent=gene-PYH62_06350;Dbxref=NCBI_GP:WHI78449.1;Name=WHI78449.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499956.1;locus_tag=PYH62_06350;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WHI78449.1;transl_table=11 CP118825.1 Genbank gene 1256338 1256838 . + . ID=gene-PYH62_06355;Name=PYH62_06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06355 CP118825.1 Protein Homology CDS 1256338 1256838 . + 0 ID=cds-WHI78450.1;Parent=gene-PYH62_06355;Dbxref=NCBI_GP:WHI78450.1;Name=WHI78450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499955.1;locus_tag=PYH62_06355;product=PTS glucose transporter subunit IIA;protein_id=WHI78450.1;transl_table=11 CP118825.1 Genbank gene 1256838 1257059 . + . ID=gene-PYH62_06360;Name=PYH62_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06360 CP118825.1 Protein Homology CDS 1256838 1257059 . + 0 ID=cds-WHI78451.1;Parent=gene-PYH62_06360;Dbxref=NCBI_GP:WHI78451.1;Name=WHI78451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499954.1;locus_tag=PYH62_06360;product=YozE family protein;protein_id=WHI78451.1;transl_table=11 CP118825.1 Genbank gene 1257261 1258730 . + . ID=gene-PYH62_06365;Name=PYH62_06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06365 CP118825.1 Protein Homology CDS 1257261 1258730 . + 0 ID=cds-WHI78452.1;Parent=gene-PYH62_06365;Dbxref=NCBI_GP:WHI78452.1;Name=WHI78452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455339.1;locus_tag=PYH62_06365;product=S41 family peptidase;protein_id=WHI78452.1;transl_table=11 CP118825.1 Genbank gene 1258748 1259251 . + . ID=gene-PYH62_06370;Name=PYH62_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06370 CP118825.1 Protein Homology CDS 1258748 1259251 . + 0 ID=cds-WHI78453.1;Parent=gene-PYH62_06370;Dbxref=NCBI_GP:WHI78453.1;Name=WHI78453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494459.1;locus_tag=PYH62_06370;product=GNAT family N-acetyltransferase;protein_id=WHI78453.1;transl_table=11 CP118825.1 Genbank gene 1259270 1260337 . + . ID=gene-PYH62_06375;Name=PYH62_06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06375 CP118825.1 Protein Homology CDS 1259270 1260337 . + 0 ID=cds-WHI78454.1;Parent=gene-PYH62_06375;Dbxref=NCBI_GP:WHI78454.1;Name=WHI78454.1;Ontology_term=GO:0050511;gbkey=CDS;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176325.1;locus_tag=PYH62_06375;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WHI78454.1;transl_table=11 CP118825.1 Genbank gene 1260355 1260978 . + . ID=gene-PYH62_06380;Name=PYH62_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06380 CP118825.1 Protein Homology CDS 1260355 1260978 . + 0 ID=cds-WHI78455.1;Parent=gene-PYH62_06380;Dbxref=NCBI_GP:WHI78455.1;Name=WHI78455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488540.1;locus_tag=PYH62_06380;product=phosphatase PAP2 family protein;protein_id=WHI78455.1;transl_table=11 CP118825.1 Genbank gene 1261303 1261962 . + . ID=gene-PYH62_06385;Name=PYH62_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06385 CP118825.1 Protein Homology CDS 1261303 1261962 . + 0 ID=cds-WHI78456.1;Parent=gene-PYH62_06385;Dbxref=NCBI_GP:WHI78456.1;Name=WHI78456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499946.1;locus_tag=PYH62_06385;product=response regulator transcription factor;protein_id=WHI78456.1;transl_table=11 CP118825.1 Genbank gene 1261959 1263320 . + . ID=gene-PYH62_06390;Name=PYH62_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06390 CP118825.1 Protein Homology CDS 1261959 1263320 . + 0 ID=cds-WHI80249.1;Parent=gene-PYH62_06390;Dbxref=NCBI_GP:WHI80249.1;Name=WHI80249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275786.1;locus_tag=PYH62_06390;product=ATP-binding protein;protein_id=WHI80249.1;transl_table=11 CP118825.1 Genbank pseudogene 1263491 1266299 . + . ID=gene-PYH62_06395;Name=PYH62_06395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_06395;pseudo=true CP118825.1 Protein Homology CDS 1263491 1266299 . + 0 ID=cds-PYH62_06395;Parent=gene-PYH62_06395;Note=frameshifted;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499944.1;locus_tag=PYH62_06395;product=2-oxoglutarate dehydrogenase E1 component;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1266311 1267618 . + . ID=gene-PYH62_06400;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=PYH62_06400 CP118825.1 Protein Homology CDS 1266311 1267618 . + 0 ID=cds-WHI78457.1;Parent=gene-PYH62_06400;Dbxref=NCBI_GP:WHI78457.1;Name=WHI78457.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499943.1;locus_tag=PYH62_06400;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WHI78457.1;transl_table=11 CP118825.1 Genbank gene 1267816 1267992 . + . ID=gene-PYH62_06405;Name=PYH62_06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06405 CP118825.1 Protein Homology CDS 1267816 1267992 . + 0 ID=cds-WHI78458.1;Parent=gene-PYH62_06405;Dbxref=NCBI_GP:WHI78458.1;Name=WHI78458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835255.1;locus_tag=PYH62_06405;product=hypothetical protein;protein_id=WHI78458.1;transl_table=11 CP118825.1 Genbank pseudogene 1268299 1269102 . + . ID=gene-PYH62_06410;Name=PYH62_06410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_06410;pseudo=true CP118825.1 Protein Homology CDS 1268299 1269102 . + 0 ID=cds-PYH62_06410;Parent=gene-PYH62_06410;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831172.1;locus_tag=PYH62_06410;product=VOC family protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1269142 1269345 . + . ID=gene-PYH62_06415;Name=PYH62_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06415 CP118825.1 Protein Homology CDS 1269142 1269345 . + 0 ID=cds-WHI80250.1;Parent=gene-PYH62_06415;Dbxref=NCBI_GP:WHI80250.1;Name=WHI80250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499941.2;locus_tag=PYH62_06415;product=DUF6501 family protein;protein_id=WHI80250.1;transl_table=11 CP118825.1 Genbank gene 1269463 1270254 . + . ID=gene-PYH62_06420;Name=PYH62_06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06420 CP118825.1 Protein Homology CDS 1269463 1270254 . + 0 ID=cds-WHI78459.1;Parent=gene-PYH62_06420;Dbxref=NCBI_GP:WHI78459.1;Name=WHI78459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499940.1;locus_tag=PYH62_06420;product=MoxR family ATPase;protein_id=WHI78459.1;transl_table=11 CP118825.1 Genbank gene 1270267 1272156 . + . ID=gene-PYH62_06425;Name=PYH62_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06425 CP118825.1 Protein Homology CDS 1270267 1272156 . + 0 ID=cds-WHI78460.1;Parent=gene-PYH62_06425;Dbxref=NCBI_GP:WHI78460.1;Name=WHI78460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275795.1;locus_tag=PYH62_06425;product=nitric oxide reductase activation protein NorD;protein_id=WHI78460.1;transl_table=11 CP118825.1 Genbank gene 1272276 1273619 . + . ID=gene-PYH62_06430;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=PYH62_06430 CP118825.1 Protein Homology CDS 1272276 1273619 . + 0 ID=cds-WHI78461.1;Parent=gene-PYH62_06430;Dbxref=NCBI_GP:WHI78461.1;Name=WHI78461.1;Ontology_term=GO:0015803,GO:0015658;gbkey=CDS;gene=brnQ;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303123.1;locus_tag=PYH62_06430;product=branched-chain amino acid transport system II carrier protein;protein_id=WHI78461.1;transl_table=11 CP118825.1 Genbank pseudogene 1273676 1274816 . - . ID=gene-PYH62_06435;Name=PYH62_06435;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_06435;pseudo=true CP118825.1 Protein Homology CDS 1273676 1274816 . - 0 ID=cds-PYH62_06435;Parent=gene-PYH62_06435;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275798.1;locus_tag=PYH62_06435;product=toxic anion resistance protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1274852 1275478 . - . ID=gene-PYH62_06440;Name=PYH62_06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06440 CP118825.1 Protein Homology CDS 1274852 1275478 . - 0 ID=cds-WHI78462.1;Parent=gene-PYH62_06440;Dbxref=NCBI_GP:WHI78462.1;Name=WHI78462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176338.1;locus_tag=PYH62_06440;product=5-bromo-4-chloroindolyl phosphate hydrolysis family protein;protein_id=WHI78462.1;transl_table=11 CP118825.1 Genbank pseudogene 1275496 1275770 . - . ID=gene-PYH62_06445;Name=PYH62_06445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_06445;pseudo=true CP118825.1 Protein Homology CDS 1275496 1275770 . - 0 ID=cds-PYH62_06445;Parent=gene-PYH62_06445;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176339.1;locus_tag=PYH62_06445;product=acylphosphatase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1275938 1276246 . + . ID=gene-PYH62_06450;Name=msaA;gbkey=Gene;gene=msaA;gene_biotype=protein_coding;locus_tag=PYH62_06450 CP118825.1 Protein Homology CDS 1275938 1276246 . + 0 ID=cds-WHI78463.1;Parent=gene-PYH62_06450;Dbxref=NCBI_GP:WHI78463.1;Name=WHI78463.1;gbkey=CDS;gene=msaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439708.1;locus_tag=PYH62_06450;product=regulatory protein MsaA;protein_id=WHI78463.1;transl_table=11 CP118825.1 Genbank gene 1276452 1276652 . + . ID=gene-PYH62_06455;Name=cspA;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;gene_synonym=msaB;locus_tag=PYH62_06455 CP118825.1 Protein Homology CDS 1276452 1276652 . + 0 ID=cds-WHI78464.1;Parent=gene-PYH62_06455;Dbxref=NCBI_GP:WHI78464.1;Name=WHI78464.1;gbkey=CDS;gene=cspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900294.1;locus_tag=PYH62_06455;product=cold shock protein CspA;protein_id=WHI78464.1;transl_table=11 CP118825.1 Genbank gene 1276838 1278103 . - . ID=gene-PYH62_06460;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=PYH62_06460 CP118825.1 Protein Homology CDS 1276838 1278103 . - 0 ID=cds-WHI78465.1;Parent=gene-PYH62_06460;Dbxref=NCBI_GP:WHI78465.1;Name=WHI78465.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499928.1;locus_tag=PYH62_06460;product=diaminopimelate decarboxylase;protein_id=WHI78465.1;transl_table=11 CP118825.1 Genbank gene 1278105 1279178 . - . ID=gene-PYH62_06465;Name=PYH62_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06465 CP118825.1 Protein Homology CDS 1278105 1279178 . - 0 ID=cds-WHI78466.1;Parent=gene-PYH62_06465;Dbxref=NCBI_GP:WHI78466.1;Name=WHI78466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488525.1;locus_tag=PYH62_06465;product=alanine racemase;protein_id=WHI78466.1;transl_table=11 CP118825.1 Genbank gene 1279185 1280336 . - . ID=gene-PYH62_06470;Name=PYH62_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06470 CP118825.1 Protein Homology CDS 1279185 1280336 . - 0 ID=cds-WHI78467.1;Parent=gene-PYH62_06470;Dbxref=NCBI_GP:WHI78467.1;Name=WHI78467.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275805.1;locus_tag=PYH62_06470;product=amidohydrolase;protein_id=WHI78467.1;transl_table=11 CP118825.1 Genbank pseudogene 1280445 1281165 . - . ID=gene-PYH62_06475;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=pseudogene;locus_tag=PYH62_06475;pseudo=true CP118825.1 Protein Homology CDS 1280445 1281165 . - 0 ID=cds-PYH62_06475;Parent=gene-PYH62_06475;Note=frameshifted;Ontology_term=GO:0009089,GO:0047200;gbkey=CDS;gene=dapD;go_function=tetrahydrodipicolinate N-acetyltransferase activity|0047200||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499925.1;locus_tag=PYH62_06475;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-acetyltransferase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1281190 1281915 . - . ID=gene-PYH62_06480;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=PYH62_06480 CP118825.1 Protein Homology CDS 1281190 1281915 . - 0 ID=cds-WHI78468.1;Parent=gene-PYH62_06480;Dbxref=NCBI_GP:WHI78468.1;Name=WHI78468.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275807.1;locus_tag=PYH62_06480;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WHI78468.1;transl_table=11 CP118825.1 Genbank gene 1281918 1282799 . - . ID=gene-PYH62_06485;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=PYH62_06485 CP118825.1 Protein Homology CDS 1281918 1282799 . - 0 ID=cds-WHI78469.1;Parent=gene-PYH62_06485;Dbxref=NCBI_GP:WHI78469.1;Name=WHI78469.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488541.1;locus_tag=PYH62_06485;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WHI78469.1;transl_table=11 CP118825.1 Genbank gene 1282801 1283790 . - . ID=gene-PYH62_06490;Name=PYH62_06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06490 CP118825.1 Protein Homology CDS 1282801 1283790 . - 0 ID=cds-WHI78470.1;Parent=gene-PYH62_06490;Dbxref=NCBI_GP:WHI78470.1;Name=WHI78470.1;Ontology_term=GO:0008652,GO:0004073,GO:0016620,GO:0051287;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831123.1;locus_tag=PYH62_06490;product=aspartate-semialdehyde dehydrogenase;protein_id=WHI78470.1;transl_table=11 CP118825.1 Genbank gene 1283850 1285055 . - . ID=gene-PYH62_06495;Name=PYH62_06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06495 CP118825.1 Protein Homology CDS 1283850 1285055 . - 0 ID=cds-WHI80251.1;Parent=gene-PYH62_06495;Dbxref=NCBI_GP:WHI80251.1;Name=WHI80251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499921.1;locus_tag=PYH62_06495;product=aspartate kinase;protein_id=WHI80251.1;transl_table=11 CP118825.1 cmsearch riboswitch 1285133 1285308 . - . ID=id-CP118825.1:1285133..1285308;Dbxref=RFAM:RF00168;Note=Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis%2C transport and catabolism;bound_moiety=lysine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch CP118825.1 Genbank gene 1285581 1287185 . - . ID=gene-PYH62_06500;Name=PYH62_06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06500 CP118825.1 Protein Homology CDS 1285581 1287185 . - 0 ID=cds-WHI78471.1;Parent=gene-PYH62_06500;Dbxref=NCBI_GP:WHI78471.1;Name=WHI78471.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493635.1;locus_tag=PYH62_06500;product=ATP-binding cassette domain-containing protein;protein_id=WHI78471.1;transl_table=11 CP118825.1 Genbank gene 1287334 1288230 . + . ID=gene-PYH62_06505;Name=cvfB;gbkey=Gene;gene=cvfB;gene_biotype=protein_coding;locus_tag=PYH62_06505 CP118825.1 Protein Homology CDS 1287334 1288230 . + 0 ID=cds-WHI78472.1;Parent=gene-PYH62_06505;Dbxref=NCBI_GP:WHI78472.1;Name=WHI78472.1;gbkey=CDS;gene=cvfB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499919.1;locus_tag=PYH62_06505;product=RNA-binding virulence regulatory protein CvfB;protein_id=WHI78472.1;transl_table=11 CP118825.1 Genbank gene 1288464 1289414 . + . ID=gene-PYH62_06510;Name=PYH62_06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06510 CP118825.1 Protein Homology CDS 1288464 1289414 . + 0 ID=cds-WHI78473.1;Parent=gene-PYH62_06510;Dbxref=NCBI_GP:WHI78473.1;Name=WHI78473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275814.1;locus_tag=PYH62_06510;product=PstS family phosphate ABC transporter substrate-binding protein;protein_id=WHI78473.1;transl_table=11 CP118825.1 Genbank gene 1289602 1290528 . + . ID=gene-PYH62_06515;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=PYH62_06515 CP118825.1 Protein Homology CDS 1289602 1290528 . + 0 ID=cds-WHI78474.1;Parent=gene-PYH62_06515;Dbxref=NCBI_GP:WHI78474.1;Name=WHI78474.1;Ontology_term=GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499914.1;locus_tag=PYH62_06515;product=phosphate ABC transporter permease subunit PstC;protein_id=WHI78474.1;transl_table=11 CP118825.1 Genbank gene 1290530 1291450 . + . ID=gene-PYH62_06520;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=PYH62_06520 CP118825.1 Protein Homology CDS 1290530 1291450 . + 0 ID=cds-WHI78475.1;Parent=gene-PYH62_06520;Dbxref=NCBI_GP:WHI78475.1;Name=WHI78475.1;Ontology_term=GO:0015415,GO:0005886,GO:0055052;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831209.1;locus_tag=PYH62_06520;product=phosphate ABC transporter permease PstA;protein_id=WHI78475.1;transl_table=11 CP118825.1 Genbank gene 1291528 1292454 . + . ID=gene-PYH62_06525;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=PYH62_06525 CP118825.1 Protein Homology CDS 1291528 1292454 . + 0 ID=cds-WHI78476.1;Parent=gene-PYH62_06525;Dbxref=NCBI_GP:WHI78476.1;Name=WHI78476.1;Ontology_term=GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831097.1;locus_tag=PYH62_06525;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WHI78476.1;transl_table=11 CP118825.1 Genbank gene 1292461 1293111 . + . ID=gene-PYH62_06530;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=PYH62_06530 CP118825.1 Protein Homology CDS 1292461 1293111 . + 0 ID=cds-WHI78477.1;Parent=gene-PYH62_06530;Dbxref=NCBI_GP:WHI78477.1;Name=WHI78477.1;Ontology_term=GO:0051049,GO:0003700;gbkey=CDS;gene=phoU;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of transport|0051049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449706.1;locus_tag=PYH62_06530;product=phosphate signaling complex protein PhoU;protein_id=WHI78477.1;transl_table=11 CP118825.1 Genbank gene 1293211 1295019 . - . ID=gene-PYH62_06535;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=protein_coding;locus_tag=PYH62_06535 CP118825.1 Protein Homology CDS 1293211 1295019 . - 0 ID=cds-WHI78478.1;Parent=gene-PYH62_06535;Dbxref=NCBI_GP:WHI78478.1;Name=WHI78478.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449848.1;locus_tag=PYH62_06535;product=oligoendopeptidase F;protein_id=WHI78478.1;transl_table=11 CP118825.1 Genbank gene 1295187 1295531 . + . ID=gene-PYH62_06540;Name=PYH62_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06540 CP118825.1 Protein Homology CDS 1295187 1295531 . + 0 ID=cds-WHI78479.1;Parent=gene-PYH62_06540;Dbxref=NCBI_GP:WHI78479.1;Name=WHI78479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000171799.1;locus_tag=PYH62_06540;product=hypothetical protein;protein_id=WHI78479.1;transl_table=11 CP118825.1 Genbank gene 1295610 1296623 . - . ID=gene-PYH62_06545;Name=PYH62_06545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06545 CP118825.1 Protein Homology CDS 1295610 1296623 . - 0 ID=cds-WHI78480.1;Parent=gene-PYH62_06545;Dbxref=NCBI_GP:WHI78480.1;Name=WHI78480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174695.1;locus_tag=PYH62_06545;product=ABC transporter substrate-binding protein;protein_id=WHI78480.1;transl_table=11 CP118825.1 Genbank gene 1297856 1299115 . - . ID=gene-PYH62_06550;Name=PYH62_06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06550 CP118825.1 Protein Homology CDS 1297856 1299115 . - 0 ID=cds-WHI78481.1;Parent=gene-PYH62_06550;Dbxref=NCBI_GP:WHI78481.1;Name=WHI78481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499901.1;locus_tag=PYH62_06550;product=aminoacyltransferase;protein_id=WHI78481.1;transl_table=11 CP118825.1 Genbank pseudogene 1299134 1300397 . - . ID=gene-PYH62_06555;Name=PYH62_06555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_06555;pseudo=true CP118825.1 Protein Homology CDS 1299134 1300397 . - 0 ID=cds-PYH62_06555;Parent=gene-PYH62_06555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455361.1;locus_tag=PYH62_06555;product=aminoacyltransferase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1300744 1301478 . - . ID=gene-PYH62_06560;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=PYH62_06560 CP118825.1 Protein Homology CDS 1300744 1301478 . - 0 ID=cds-WHI78482.1;Parent=gene-PYH62_06560;Dbxref=NCBI_GP:WHI78482.1;Name=WHI78482.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835377.1;locus_tag=PYH62_06560;product=tryptophan synthase subunit alpha;protein_id=WHI78482.1;transl_table=11 CP118825.1 Genbank gene 1301471 1302685 . - . ID=gene-PYH62_06565;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=PYH62_06565 CP118825.1 Protein Homology CDS 1301471 1302685 . - 0 ID=cds-WHI78483.1;Parent=gene-PYH62_06565;Dbxref=NCBI_GP:WHI78483.1;Name=WHI78483.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174691.1;locus_tag=PYH62_06565;product=tryptophan synthase subunit beta;protein_id=WHI78483.1;transl_table=11 CP118825.1 Genbank gene 1302657 1303316 . - . ID=gene-PYH62_06570;Name=PYH62_06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06570 CP118825.1 Protein Homology CDS 1302657 1303316 . - 0 ID=cds-WHI78484.1;Parent=gene-PYH62_06570;Dbxref=NCBI_GP:WHI78484.1;Name=WHI78484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174690.1;locus_tag=PYH62_06570;product=phosphoribosylanthranilate isomerase;protein_id=WHI78484.1;transl_table=11 CP118825.1 Genbank gene 1303313 1304092 . - . ID=gene-PYH62_06575;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=PYH62_06575 CP118825.1 Protein Homology CDS 1303313 1304092 . - 0 ID=cds-WHI78485.1;Parent=gene-PYH62_06575;Dbxref=NCBI_GP:WHI78485.1;Name=WHI78485.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488522.1;locus_tag=PYH62_06575;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WHI78485.1;transl_table=11 CP118825.1 Genbank gene 1304095 1305099 . - . ID=gene-PYH62_06580;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=PYH62_06580 CP118825.1 Protein Homology CDS 1304095 1305099 . - 0 ID=cds-WHI78486.1;Parent=gene-PYH62_06580;Dbxref=NCBI_GP:WHI78486.1;Name=WHI78486.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835380.1;locus_tag=PYH62_06580;product=anthranilate phosphoribosyltransferase;protein_id=WHI78486.1;transl_table=11 CP118825.1 Genbank gene 1305044 1305673 . - . ID=gene-PYH62_06585;Name=PYH62_06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06585 CP118825.1 Protein Homology CDS 1305044 1305673 . - 0 ID=cds-WHI78487.1;Parent=gene-PYH62_06585;Dbxref=NCBI_GP:WHI78487.1;Name=WHI78487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449807.1;locus_tag=PYH62_06585;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WHI78487.1;transl_table=11 CP118825.1 Genbank gene 1305670 1307079 . - . ID=gene-PYH62_06590;Name=PYH62_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06590 CP118825.1 Protein Homology CDS 1305670 1307079 . - 0 ID=cds-WHI78488.1;Parent=gene-PYH62_06590;Dbxref=NCBI_GP:WHI78488.1;Name=WHI78488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503308.1;locus_tag=PYH62_06590;product=anthranilate synthase component I;protein_id=WHI78488.1;transl_table=11 CP118825.1 Genbank pseudogene 1307567 1308602 . - . ID=gene-PYH62_06595;Name=PYH62_06595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_06595;pseudo=true CP118825.1 Protein Homology CDS 1307567 1308602 . - 0 ID=cds-PYH62_06595;Parent=gene-PYH62_06595;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174685.1;locus_tag=PYH62_06595;product=M42 family metallopeptidase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1308738 1309829 . + . ID=gene-PYH62_06600;Name=PYH62_06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06600 CP118825.1 Protein Homology CDS 1308738 1309829 . + 0 ID=cds-WHI78489.1;Parent=gene-PYH62_06600;Dbxref=NCBI_GP:WHI78489.1;Name=WHI78489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835383.1;locus_tag=PYH62_06600;product=prephenate dehydrogenase;protein_id=WHI78489.1;transl_table=11 CP118825.1 Genbank gene 1309881 1311143 . - . ID=gene-PYH62_06605;Name=PYH62_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06605 CP118825.1 Protein Homology CDS 1309881 1311143 . - 0 ID=cds-WHI78490.1;Parent=gene-PYH62_06605;Dbxref=NCBI_GP:WHI78490.1;Name=WHI78490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499890.1;locus_tag=PYH62_06605;product=Y-family DNA polymerase;protein_id=WHI78490.1;transl_table=11 CP118825.1 Genbank gene 1311292 1311477 . + . ID=gene-PYH62_06610;Name=PYH62_06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06610 CP118825.1 Protein Homology CDS 1311292 1311477 . + 0 ID=cds-WHI78491.1;Parent=gene-PYH62_06610;Dbxref=NCBI_GP:WHI78491.1;Name=WHI78491.1;Ontology_term=GO:0006725,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=cellular aromatic compound metabolic process|0006725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499889.1;locus_tag=PYH62_06610;product=4-oxalocrotonate tautomerase;protein_id=WHI78491.1;transl_table=11 CP118825.1 Genbank gene 1311563 1312540 . - . ID=gene-PYH62_06615;Name=PYH62_06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06615 CP118825.1 Protein Homology CDS 1311563 1312540 . - 0 ID=cds-WHI78492.1;Parent=gene-PYH62_06615;Dbxref=NCBI_GP:WHI78492.1;Name=WHI78492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453185.1;locus_tag=PYH62_06615;product=LCP family protein;protein_id=WHI78492.1;transl_table=11 CP118825.1 Genbank gene 1312681 1313196 . + . ID=gene-PYH62_06620;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=PYH62_06620 CP118825.1 Protein Homology CDS 1312681 1313196 . + 0 ID=cds-WHI78493.1;Parent=gene-PYH62_06620;Dbxref=NCBI_GP:WHI78493.1;Name=WHI78493.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449832.1;locus_tag=PYH62_06620;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WHI78493.1;transl_table=11 CP118825.1 Genbank gene 1313234 1315756 . - . ID=gene-PYH62_06625;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=PYH62_06625 CP118825.1 Protein Homology CDS 1313234 1315756 . - 0 ID=cds-WHI78494.1;Parent=gene-PYH62_06625;Dbxref=NCBI_GP:WHI78494.1;Name=WHI78494.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275840.1;locus_tag=PYH62_06625;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WHI78494.1;transl_table=11 CP118825.1 Genbank gene 1315971 1317191 . - . ID=gene-PYH62_06630;Name=PYH62_06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06630 CP118825.1 Protein Homology CDS 1315971 1317191 . - 0 ID=cds-WHI78495.1;Parent=gene-PYH62_06630;Dbxref=NCBI_GP:WHI78495.1;Name=WHI78495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174679.1;locus_tag=PYH62_06630;product=AI-2E family transporter;protein_id=WHI78495.1;transl_table=11 CP118825.1 Genbank gene 1317258 1318109 . - . ID=gene-PYH62_06635;Name=PYH62_06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06635 CP118825.1 Protein Homology CDS 1317258 1318109 . - 0 ID=cds-WHI78496.1;Parent=gene-PYH62_06635;Dbxref=NCBI_GP:WHI78496.1;Name=WHI78496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275842.1;locus_tag=PYH62_06635;product=transcription antiterminator;protein_id=WHI78496.1;transl_table=11 CP118825.1 Genbank pseudogene 1318238 1319700 . - . ID=gene-PYH62_06640;Name=PYH62_06640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_06640;pseudo=true CP118825.1 Protein Homology CDS 1318238 1319700 . - 0 ID=cds-PYH62_06640;Parent=gene-PYH62_06640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488512.1;locus_tag=PYH62_06640;product=alanine/glycine:cation symporter family protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1319910 1322309 . - . ID=gene-PYH62_06645;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=PYH62_06645 CP118825.1 Protein Homology CDS 1319910 1322309 . - 0 ID=cds-WHI78497.1;Parent=gene-PYH62_06645;Dbxref=NCBI_GP:WHI78497.1;Name=WHI78497.1;Ontology_term=GO:0006260,GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499880.1;locus_tag=PYH62_06645;product=DNA topoisomerase IV subunit A;protein_id=WHI78497.1;transl_table=11 CP118825.1 Genbank gene 1322306 1324294 . - . ID=gene-PYH62_06650;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=PYH62_06650 CP118825.1 Protein Homology CDS 1322306 1324294 . - 0 ID=cds-WHI80252.1;Parent=gene-PYH62_06650;Dbxref=NCBI_GP:WHI80252.1;Name=WHI80252.1;Ontology_term=GO:0006260,GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parE;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455371.1;locus_tag=PYH62_06650;product=DNA topoisomerase IV subunit B;protein_id=WHI80252.1;transl_table=11 CP118825.1 Genbank gene 1324511 1325119 . + . ID=gene-PYH62_06655;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=PYH62_06655 CP118825.1 Protein Homology CDS 1324511 1325119 . + 0 ID=cds-WHI78498.1;Parent=gene-PYH62_06655;Dbxref=NCBI_GP:WHI78498.1;Name=WHI78498.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275846.1;locus_tag=PYH62_06655;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WHI78498.1;transl_table=11 CP118825.1 Genbank gene 1325262 1325561 . + . ID=gene-PYH62_06660;Name=PYH62_06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06660 CP118825.1 Protein Homology CDS 1325262 1325561 . + 0 ID=cds-WHI78499.1;Parent=gene-PYH62_06660;Dbxref=NCBI_GP:WHI78499.1;Name=WHI78499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449780.1;locus_tag=PYH62_06660;product=HesB/YadR/YfhF family protein;protein_id=WHI78499.1;transl_table=11 CP118825.1 Genbank gene 1325610 1326080 . - . ID=gene-PYH62_06665;Name=PYH62_06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06665 CP118825.1 Protein Homology CDS 1325610 1326080 . - 0 ID=cds-WHI78500.1;Parent=gene-PYH62_06665;Dbxref=NCBI_GP:WHI78500.1;Name=WHI78500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835485.1;locus_tag=PYH62_06665;product=thioesterase family protein;protein_id=WHI78500.1;transl_table=11 CP118825.1 Genbank pseudogene 1326276 1328982 . - . ID=gene-PYH62_06670;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=pseudogene;locus_tag=PYH62_06670;pseudo=true CP118825.1 Protein Homology CDS 1326276 1328982 . - 0 ID=cds-PYH62_06670;Parent=gene-PYH62_06670;Note=frameshifted;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499875.1;locus_tag=PYH62_06670;product=aconitate hydratase AcnA;pseudo=true;transl_table=11 CP118825.1 Genbank pseudogene 1329354 1331001 . - . ID=gene-PYH62_06675;Name=PYH62_06675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_06675;pseudo=true CP118825.1 Protein Homology CDS 1329354 1331001 . - 0 ID=cds-PYH62_06675;Parent=gene-PYH62_06675;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174670.1;locus_tag=PYH62_06675;product=BCCT family transporter;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1331217 1331573 . + . ID=gene-PYH62_06680;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=PYH62_06680 CP118825.1 Protein Homology CDS 1331217 1331573 . + 0 ID=cds-WHI78501.1;Parent=gene-PYH62_06680;Dbxref=NCBI_GP:WHI78501.1;Name=WHI78501.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:YP_008530241.1;locus_tag=PYH62_06680;product=large conductance mechanosensitive channel protein MscL;protein_id=WHI78501.1;transl_table=11 CP118825.1 Genbank gene 1331556 1333247 . - . ID=gene-PYH62_06685;Name=PYH62_06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06685 CP118825.1 Protein Homology CDS 1331556 1333247 . - 0 ID=cds-WHI78502.1;Parent=gene-PYH62_06685;Dbxref=NCBI_GP:WHI78502.1;Name=WHI78502.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274780.1;locus_tag=PYH62_06685;product=IS1182 family transposase;protein_id=WHI78502.1;transl_table=11 CP118825.1 Genbank gene 1333525 1336560 . - . ID=gene-PYH62_06690;Name=PYH62_06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06690 CP118825.1 Protein Homology CDS 1333525 1336560 . - 0 ID=cds-WHI78503.1;Parent=gene-PYH62_06690;Dbxref=NCBI_GP:WHI78503.1;Name=WHI78503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174668.1;locus_tag=PYH62_06690;product=SMC family ATPase;protein_id=WHI78503.1;transl_table=11 CP118825.1 Genbank gene 1336562 1337686 . - . ID=gene-PYH62_06695;Name=PYH62_06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06695 CP118825.1 Protein Homology CDS 1336562 1337686 . - 0 ID=cds-WHI78504.1;Parent=gene-PYH62_06695;Dbxref=NCBI_GP:WHI78504.1;Name=WHI78504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449112.1;locus_tag=PYH62_06695;product=exonuclease SbcCD subunit D;protein_id=WHI78504.1;transl_table=11 CP118825.1 Genbank gene 1337847 1338314 . - . ID=gene-PYH62_06700;Name=PYH62_06700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06700 CP118825.1 Protein Homology CDS 1337847 1338314 . - 0 ID=cds-WHI78505.1;Parent=gene-PYH62_06700;Dbxref=NCBI_GP:WHI78505.1;Name=WHI78505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835490.1;locus_tag=PYH62_06700;product=DUF1453 family protein;protein_id=WHI78505.1;transl_table=11 CP118825.1 Genbank gene 1338447 1338689 . - . ID=gene-PYH62_06705;Name=PYH62_06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06705 CP118825.1 Protein Homology CDS 1338447 1338689 . - 0 ID=cds-WHI78506.1;Parent=gene-PYH62_06705;Dbxref=NCBI_GP:WHI78506.1;Name=WHI78506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275855.1;locus_tag=PYH62_06705;product=YneF family protein;protein_id=WHI78506.1;transl_table=11 CP118825.1 Genbank gene 1338921 1340909 . - . ID=gene-PYH62_06710;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=PYH62_06710 CP118825.1 Protein Homology CDS 1338921 1340909 . - 0 ID=cds-WHI78507.1;Parent=gene-PYH62_06710;Dbxref=NCBI_GP:WHI78507.1;Name=WHI78507.1;Ontology_term=GO:0006098,GO:0004802,GO:0005737;gbkey=CDS;gene=tkt;go_component=cytoplasm|0005737||IEA;go_function=transketolase activity|0004802||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433588.1;locus_tag=PYH62_06710;product=transketolase;protein_id=WHI78507.1;transl_table=11 CP118825.1 Genbank gene 1341011 1341250 . - . ID=gene-PYH62_06715;Name=PYH62_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06715 CP118825.1 Protein Homology CDS 1341011 1341250 . - 0 ID=cds-WHI78508.1;Parent=gene-PYH62_06715;Dbxref=NCBI_GP:WHI78508.1;Name=WHI78508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174665.1;locus_tag=PYH62_06715;product=DUF896 domain-containing protein;protein_id=WHI78508.1;transl_table=11 CP118825.1 Genbank gene 1341813 1342433 . + . ID=gene-PYH62_06720;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=PYH62_06720 CP118825.1 Protein Homology CDS 1341813 1342433 . + 0 ID=cds-WHI78509.1;Parent=gene-PYH62_06720;Dbxref=NCBI_GP:WHI78509.1;Name=WHI78509.1;Ontology_term=GO:0006282,GO:0006355,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499863.1;locus_tag=PYH62_06720;product=transcriptional repressor LexA;protein_id=WHI78509.1;transl_table=11 CP118825.1 Genbank gene 1342639 1343664 . - . ID=gene-PYH62_06725;Name=PYH62_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06725 CP118825.1 Protein Homology CDS 1342639 1343664 . - 0 ID=cds-WHI78510.1;Parent=gene-PYH62_06725;Dbxref=NCBI_GP:WHI78510.1;Name=WHI78510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174663.1;locus_tag=PYH62_06725;product=CAP domain-containing protein;protein_id=WHI78510.1;transl_table=11 CP118825.1 Genbank gene 1343679 1344656 . - . ID=gene-PYH62_06730;Name=guaC;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=PYH62_06730 CP118825.1 Protein Homology CDS 1343679 1344656 . - 0 ID=cds-WHI78511.1;Parent=gene-PYH62_06730;Dbxref=NCBI_GP:WHI78511.1;Name=WHI78511.1;Ontology_term=GO:0015950,GO:0003920;gbkey=CDS;gene=guaC;go_function=GMP reductase activity|0003920||IEA;go_process=purine nucleotide interconversion|0015950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015365036.1;locus_tag=PYH62_06730;product=GMP reductase;protein_id=WHI78511.1;transl_table=11 CP118825.1 Genbank gene 1344851 1345120 . - . ID=gene-PYH62_06735;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=PYH62_06735 CP118825.1 Protein Homology CDS 1344851 1345120 . - 0 ID=cds-WHI78512.1;Parent=gene-PYH62_06735;Dbxref=NCBI_GP:WHI78512.1;Name=WHI78512.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499859.1;locus_tag=PYH62_06735;product=30S ribosomal protein S14;protein_id=WHI78512.1;transl_table=11 CP118825.1 Genbank gene 1345292 1345441 . - . ID=gene-PYH62_06740;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=PYH62_06740 CP118825.1 Protein Homology CDS 1345292 1345441 . - 0 ID=cds-WHI78513.1;Parent=gene-PYH62_06740;Dbxref=NCBI_GP:WHI78513.1;Name=WHI78513.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001265708.1;locus_tag=PYH62_06740;product=50S ribosomal protein L33;protein_id=WHI78513.1;transl_table=11 CP118825.1 Genbank gene 1345691 1347139 . + . ID=gene-PYH62_06745;Name=PYH62_06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06745 CP118825.1 Protein Homology CDS 1345691 1347139 . + 0 ID=cds-WHI78514.1;Parent=gene-PYH62_06745;Dbxref=NCBI_GP:WHI78514.1;Name=WHI78514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361629.1;locus_tag=PYH62_06745;product=amino acid permease;protein_id=WHI78514.1;transl_table=11 CP118825.1 Genbank gene 1347276 1347590 . + . ID=gene-PYH62_06750;Name=PYH62_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06750 CP118825.1 Protein Homology CDS 1347276 1347590 . + 0 ID=cds-WHI78515.1;Parent=gene-PYH62_06750;Dbxref=NCBI_GP:WHI78515.1;Name=WHI78515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499854.1;locus_tag=PYH62_06750;product=hypothetical protein;protein_id=WHI78515.1;transl_table=11 CP118825.1 Genbank gene 1347674 1348477 . - . ID=gene-PYH62_06755;Name=PYH62_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06755 CP118825.1 Protein Homology CDS 1347674 1348477 . - 0 ID=cds-WHI78516.1;Parent=gene-PYH62_06755;Dbxref=NCBI_GP:WHI78516.1;Name=WHI78516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017328449.1;locus_tag=PYH62_06755;product=Cof-type HAD-IIB family hydrolase;protein_id=WHI78516.1;transl_table=11 CP118825.1 Genbank gene 1348528 1349445 . - . ID=gene-PYH62_06760;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=PYH62_06760 CP118825.1 Protein Homology CDS 1348528 1349445 . - 0 ID=cds-WHI78517.1;Parent=gene-PYH62_06760;Dbxref=NCBI_GP:WHI78517.1;Name=WHI78517.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174658.1;locus_tag=PYH62_06760;product=homoserine kinase;protein_id=WHI78517.1;transl_table=11 CP118825.1 Genbank gene 1349447 1350508 . - . ID=gene-PYH62_06765;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=PYH62_06765 CP118825.1 Protein Homology CDS 1349447 1350508 . - 0 ID=cds-WHI78518.1;Parent=gene-PYH62_06765;Dbxref=NCBI_GP:WHI78518.1;Name=WHI78518.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499851.1;locus_tag=PYH62_06765;product=threonine synthase;protein_id=WHI78518.1;transl_table=11 CP118825.1 Genbank gene 1350514 1351791 . - . ID=gene-PYH62_06770;Name=PYH62_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06770 CP118825.1 Protein Homology CDS 1350514 1351791 . - 0 ID=cds-WHI78519.1;Parent=gene-PYH62_06770;Dbxref=NCBI_GP:WHI78519.1;Name=WHI78519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499850.1;locus_tag=PYH62_06770;product=homoserine dehydrogenase;protein_id=WHI78519.1;transl_table=11 CP118825.1 Genbank pseudogene 1351991 1353370 . + . ID=gene-PYH62_06775;Name=PYH62_06775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_06775;pseudo=true CP118825.1 Protein Homology CDS 1351991 1353370 . + 0 ID=cds-PYH62_06775;Parent=gene-PYH62_06775;Note=internal stop;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449120.1;locus_tag=PYH62_06775;product=aspartate kinase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1353421 1354002 . - . ID=gene-PYH62_06780;Name=PYH62_06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06780 CP118825.1 Protein Homology CDS 1353421 1354002 . - 0 ID=cds-WHI78520.1;Parent=gene-PYH62_06780;Dbxref=NCBI_GP:WHI78520.1;Name=WHI78520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448718.1;locus_tag=PYH62_06780;product=hypothetical protein;protein_id=WHI78520.1;transl_table=11 CP118825.1 Genbank gene 1354321 1355178 . + . ID=gene-PYH62_06785;Name=PYH62_06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06785 CP118825.1 Protein Homology CDS 1354321 1355178 . + 0 ID=cds-WHI78521.1;Parent=gene-PYH62_06785;Dbxref=NCBI_GP:WHI78521.1;Name=WHI78521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488690.1;locus_tag=PYH62_06785;product=hypothetical protein;protein_id=WHI78521.1;transl_table=11 CP118825.1 Genbank gene 1355230 1355775 . - . ID=gene-PYH62_06790;Name=PYH62_06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06790 CP118825.1 Protein Homology CDS 1355230 1355775 . - 0 ID=cds-WHI78522.1;Parent=gene-PYH62_06790;Dbxref=NCBI_GP:WHI78522.1;Name=WHI78522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448734.1;locus_tag=PYH62_06790;product=thermonuclease family protein;protein_id=WHI78522.1;transl_table=11 CP118825.1 Genbank gene 1355944 1356135 . + . ID=gene-PYH62_06795;Name=PYH62_06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06795 CP118825.1 Protein Homology CDS 1355944 1356135 . + 0 ID=cds-WHI78523.1;Parent=gene-PYH62_06795;Dbxref=NCBI_GP:WHI78523.1;Name=WHI78523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174651.1;locus_tag=PYH62_06795;product=LapA family protein;protein_id=WHI78523.1;transl_table=11 CP118825.1 Genbank gene 1356241 1356843 . - . ID=gene-PYH62_06800;Name=PYH62_06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06800 CP118825.1 Protein Homology CDS 1356241 1356843 . - 0 ID=cds-WHI78524.1;Parent=gene-PYH62_06800;Dbxref=NCBI_GP:WHI78524.1;Name=WHI78524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439610.1;locus_tag=PYH62_06800;product=response regulator transcription factor;protein_id=WHI78524.1;transl_table=11 CP118825.1 Genbank gene 1356840 1357934 . - . ID=gene-PYH62_06805;Name=PYH62_06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06805 CP118825.1 Protein Homology CDS 1356840 1357934 . - 0 ID=cds-WHI78525.1;Parent=gene-PYH62_06805;Dbxref=NCBI_GP:WHI78525.1;Name=WHI78525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488648.1;locus_tag=PYH62_06805;product=sensor histidine kinase;protein_id=WHI78525.1;transl_table=11 CP118825.1 Genbank gene 1357935 1358669 . - . ID=gene-PYH62_06810;Name=PYH62_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06810 CP118825.1 Protein Homology CDS 1357935 1358669 . - 0 ID=cds-WHI78526.1;Parent=gene-PYH62_06810;Dbxref=NCBI_GP:WHI78526.1;Name=WHI78526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174648.1;locus_tag=PYH62_06810;product=ABC transporter permease;protein_id=WHI78526.1;transl_table=11 CP118825.1 Genbank gene 1358662 1359540 . - . ID=gene-PYH62_06815;Name=PYH62_06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06815 CP118825.1 Protein Homology CDS 1358662 1359540 . - 0 ID=cds-WHI78527.1;Parent=gene-PYH62_06815;Dbxref=NCBI_GP:WHI78527.1;Name=WHI78527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448777.1;locus_tag=PYH62_06815;product=ABC transporter ATP-binding protein;protein_id=WHI78527.1;transl_table=11 CP118825.1 Genbank gene 1359683 1361164 . - . ID=gene-PYH62_06820;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=PYH62_06820 CP118825.1 Protein Homology CDS 1359683 1361164 . - 0 ID=cds-WHI78528.1;Parent=gene-PYH62_06820;Dbxref=NCBI_GP:WHI78528.1;Name=WHI78528.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835596.1;locus_tag=PYH62_06820;product=cardiolipin synthase;protein_id=WHI78528.1;transl_table=11 CP118825.1 Genbank gene 1361197 1361391 . - . ID=gene-PYH62_06825;Name=PYH62_06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06825 CP118825.1 Protein Homology CDS 1361197 1361391 . - 0 ID=cds-WHI78529.1;Parent=gene-PYH62_06825;Dbxref=NCBI_GP:WHI78529.1;Name=WHI78529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455389.1;locus_tag=PYH62_06825;product=hypothetical protein;protein_id=WHI78529.1;transl_table=11 CP118825.1 Genbank gene 1361616 1362641 . + . ID=gene-PYH62_06830;Name=PYH62_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06830 CP118825.1 Protein Homology CDS 1361616 1362641 . + 0 ID=cds-WHI78530.1;Parent=gene-PYH62_06830;Dbxref=NCBI_GP:WHI78530.1;Name=WHI78530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499838.1;locus_tag=PYH62_06830;product=low specificity L-threonine aldolase;protein_id=WHI78530.1;transl_table=11 CP118825.1 Genbank gene 1363019 1364359 . - . ID=gene-PYH62_06835;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=PYH62_06835 CP118825.1 Protein Homology CDS 1363019 1364359 . - 0 ID=cds-WHI78531.1;Parent=gene-PYH62_06835;Dbxref=NCBI_GP:WHI78531.1;Name=WHI78531.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamate-ammonia ligase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499818.1;locus_tag=PYH62_06835;product=type I glutamate--ammonia ligase;protein_id=WHI78531.1;transl_table=11 CP118825.1 Genbank gene 1364380 1364748 . - . ID=gene-PYH62_06840;Name=PYH62_06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06840 CP118825.1 Protein Homology CDS 1364380 1364748 . - 0 ID=cds-WHI80253.1;Parent=gene-PYH62_06840;Dbxref=NCBI_GP:WHI80253.1;Name=WHI80253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499817.1;locus_tag=PYH62_06840;product=MerR family transcriptional regulator;protein_id=WHI80253.1;transl_table=11 CP118825.1 Genbank gene 1364973 1365947 . - . ID=gene-PYH62_06845;Name=PYH62_06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06845 CP118825.1 Protein Homology CDS 1364973 1365947 . - 0 ID=cds-WHI78532.1;Parent=gene-PYH62_06845;Dbxref=NCBI_GP:WHI78532.1;Name=WHI78532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448744.1;locus_tag=PYH62_06845;product=tRNA-dihydrouridine synthase;protein_id=WHI78532.1;transl_table=11 CP118825.1 Genbank gene 1366088 1367326 . - . ID=gene-PYH62_06850;Name=PYH62_06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06850 CP118825.1 Protein Homology CDS 1366088 1367326 . - 0 ID=cds-WHI78533.1;Parent=gene-PYH62_06850;Dbxref=NCBI_GP:WHI78533.1;Name=WHI78533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499816.1;locus_tag=PYH62_06850;product=methionine gamma-lyase family protein;protein_id=WHI78533.1;transl_table=11 CP118825.1 Genbank gene 1367352 1368590 . - . ID=gene-PYH62_06855;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=PYH62_06855 CP118825.1 Protein Homology CDS 1367352 1368590 . - 0 ID=cds-WHI78534.1;Parent=gene-PYH62_06855;Dbxref=NCBI_GP:WHI78534.1;Name=WHI78534.1;Ontology_term=GO:0008150,GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499815.1;locus_tag=PYH62_06855;product=GTPase HflX;protein_id=WHI78534.1;transl_table=11 CP118825.1 Genbank gene 1368700 1369176 . + . ID=gene-PYH62_06860;Name=PYH62_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06860 CP118825.1 Protein Homology CDS 1368700 1369176 . + 0 ID=cds-WHI78535.1;Parent=gene-PYH62_06860;Dbxref=NCBI_GP:WHI78535.1;Name=WHI78535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499814.1;locus_tag=PYH62_06860;product=glutathione peroxidase;protein_id=WHI78535.1;transl_table=11 CP118825.1 Genbank gene 1369367 1369609 . - . ID=gene-PYH62_06865;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=PYH62_06865 CP118825.1 Protein Homology CDS 1369367 1369609 . - 0 ID=cds-WHI78536.1;Parent=gene-PYH62_06865;Dbxref=NCBI_GP:WHI78536.1;Name=WHI78536.1;Ontology_term=GO:0006378,GO:0016070,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=mRNA polyadenylation|0006378||IEA,RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499813.1;locus_tag=PYH62_06865;product=RNA chaperone Hfq;protein_id=WHI78536.1;transl_table=11 CP118825.1 Genbank gene 1369563 1370561 . - . ID=gene-PYH62_06870;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=PYH62_06870 CP118825.1 Protein Homology CDS 1369563 1370561 . - 0 ID=cds-WHI78537.1;Parent=gene-PYH62_06870;Dbxref=NCBI_GP:WHI78537.1;Name=WHI78537.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448817.1;locus_tag=PYH62_06870;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WHI78537.1;transl_table=11 CP118825.1 Genbank gene 1370565 1371500 . - . ID=gene-PYH62_06875;Name=PYH62_06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06875 CP118825.1 Protein Homology CDS 1370565 1371500 . - 0 ID=cds-WHI78538.1;Parent=gene-PYH62_06875;Dbxref=NCBI_GP:WHI78538.1;Name=WHI78538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448832.1;locus_tag=PYH62_06875;product=alpha/beta hydrolase;protein_id=WHI78538.1;transl_table=11 CP118825.1 Genbank gene 1371706 1373376 . - . ID=gene-PYH62_06880;Name=PYH62_06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06880 CP118825.1 Protein Homology CDS 1371706 1373376 . - 0 ID=cds-WHI78539.1;Parent=gene-PYH62_06880;Dbxref=NCBI_GP:WHI78539.1;Name=WHI78539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488651.1;locus_tag=PYH62_06880;product=glycerol-3-phosphate dehydrogenase/oxidase;protein_id=WHI78539.1;transl_table=11 CP118825.1 Genbank pseudogene 1373524 1375025 . - . ID=gene-PYH62_06885;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=pseudogene;locus_tag=PYH62_06885;pseudo=true CP118825.1 Protein Homology CDS 1373524 1375025 . - 0 ID=cds-PYH62_06885;Parent=gene-PYH62_06885;Note=frameshifted;Ontology_term=GO:0006071,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017638335.1;locus_tag=PYH62_06885;product=glycerol kinase GlpK;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1375121 1375939 . - . ID=gene-PYH62_06890;Name=PYH62_06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06890 CP118825.1 Protein Homology CDS 1375121 1375939 . - 0 ID=cds-WHI78540.1;Parent=gene-PYH62_06890;Dbxref=NCBI_GP:WHI78540.1;Name=WHI78540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499808.1;locus_tag=PYH62_06890;product=aquaporin family protein;protein_id=WHI78540.1;transl_table=11 CP118825.1 Genbank gene 1376190 1376723 . - . ID=gene-PYH62_06895;Name=PYH62_06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06895 CP118825.1 Protein Homology CDS 1376190 1376723 . - 0 ID=cds-WHI78541.1;Parent=gene-PYH62_06895;Dbxref=NCBI_GP:WHI78541.1;Name=WHI78541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473712.1;locus_tag=PYH62_06895;product=glycerol-3-phosphate responsive antiterminator;protein_id=WHI78541.1;transl_table=11 CP118825.1 Genbank gene 1376739 1378763 . - . ID=gene-PYH62_06900;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=PYH62_06900 CP118825.1 Protein Homology CDS 1376739 1378763 . - 0 ID=cds-WHI78542.1;Parent=gene-PYH62_06900;Dbxref=NCBI_GP:WHI78542.1;Name=WHI78542.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499806.1;locus_tag=PYH62_06900;product=DNA mismatch repair endonuclease MutL;protein_id=WHI78542.1;transl_table=11 CP118825.1 Genbank gene 1378776 1381397 . - . ID=gene-PYH62_06905;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=PYH62_06905 CP118825.1 Protein Homology CDS 1378776 1381397 . - 0 ID=cds-WHI78543.1;Parent=gene-PYH62_06905;Dbxref=NCBI_GP:WHI78543.1;Name=WHI78543.1;Ontology_term=GO:0006298,GO:0005524;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275903.1;locus_tag=PYH62_06905;product=DNA mismatch repair protein MutS;protein_id=WHI78543.1;transl_table=11 CP118825.1 Genbank gene 1381599 1382087 . - . ID=gene-PYH62_06910;Name=thiW;gbkey=Gene;gene=thiW;gene_biotype=protein_coding;locus_tag=PYH62_06910 CP118825.1 Protein Homology CDS 1381599 1382087 . - 0 ID=cds-WHI78544.1;Parent=gene-PYH62_06910;Dbxref=NCBI_GP:WHI78544.1;Name=WHI78544.1;Ontology_term=GO:0006810,GO:0009228,GO:0005215;gbkey=CDS;gene=thiW;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499804.1;locus_tag=PYH62_06910;product=energy coupling factor transporter S component ThiW;protein_id=WHI78544.1;transl_table=11 CP118825.1 Genbank gene 1382108 1382476 . - . ID=gene-PYH62_06915;Name=PYH62_06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06915 CP118825.1 Protein Homology CDS 1382108 1382476 . - 0 ID=cds-WHI78545.1;Parent=gene-PYH62_06915;Dbxref=NCBI_GP:WHI78545.1;Name=WHI78545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174630.1;locus_tag=PYH62_06915;product=YlbF family regulator;protein_id=WHI78545.1;transl_table=11 CP118825.1 Genbank gene 1382478 1384022 . - . ID=gene-PYH62_06920;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=PYH62_06920 CP118825.1 Protein Homology CDS 1382478 1384022 . - 0 ID=cds-WHI78546.1;Parent=gene-PYH62_06920;Dbxref=NCBI_GP:WHI78546.1;Name=WHI78546.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275906.1;locus_tag=PYH62_06920;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WHI78546.1;transl_table=11 CP118825.1 Genbank gene 1384207 1384503 . - . ID=gene-PYH62_06925;Name=PYH62_06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06925 CP118825.1 Protein Homology CDS 1384207 1384503 . - 0 ID=cds-WHI78547.1;Parent=gene-PYH62_06925;Dbxref=NCBI_GP:WHI78547.1;Name=WHI78547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455399.1;locus_tag=PYH62_06925;product=MTH1187 family thiamine-binding protein;protein_id=WHI78547.1;transl_table=11 CP118825.1 Genbank gene 1384567 1385187 . - . ID=gene-PYH62_06930;Name=PYH62_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06930 CP118825.1 Protein Homology CDS 1384567 1385187 . - 0 ID=cds-WHI78548.1;Parent=gene-PYH62_06930;Dbxref=NCBI_GP:WHI78548.1;Name=WHI78548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455400.1;locus_tag=PYH62_06930;product=poly-gamma-glutamate hydrolase family protein;protein_id=WHI78548.1;transl_table=11 CP118825.1 Genbank gene 1385334 1386200 . - . ID=gene-PYH62_06935;Name=PYH62_06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06935 CP118825.1 Protein Homology CDS 1385334 1386200 . - 0 ID=cds-WHI78549.1;Parent=gene-PYH62_06935;Dbxref=NCBI_GP:WHI78549.1;Name=WHI78549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499800.1;locus_tag=PYH62_06935;product=2-oxoacid:ferredoxin oxidoreductase subunit beta;protein_id=WHI78549.1;transl_table=11 CP118825.1 Genbank gene 1386201 1387961 . - . ID=gene-PYH62_06940;Name=PYH62_06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06940 CP118825.1 Protein Homology CDS 1386201 1387961 . - 0 ID=cds-WHI78550.1;Parent=gene-PYH62_06940;Dbxref=NCBI_GP:WHI78550.1;Name=WHI78550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499799.1;locus_tag=PYH62_06940;product=2-oxoacid:acceptor oxidoreductase subunit alpha;protein_id=WHI78550.1;transl_table=11 CP118825.1 Genbank gene 1388071 1388865 . - . ID=gene-PYH62_06945;Name=PYH62_06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06945 CP118825.1 Protein Homology CDS 1388071 1388865 . - 0 ID=cds-WHI78551.1;Parent=gene-PYH62_06945;Dbxref=NCBI_GP:WHI78551.1;Name=WHI78551.1;Ontology_term=GO:0008152,GO:0042578;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174625.1;locus_tag=PYH62_06945;product=TIGR00282 family metallophosphoesterase;protein_id=WHI78551.1;transl_table=11 CP118825.1 Genbank gene 1389019 1389234 . + . ID=gene-PYH62_06950;Name=PYH62_06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06950 CP118825.1 Protein Homology CDS 1389019 1389234 . + 0 ID=cds-WHI78552.1;Parent=gene-PYH62_06950;Dbxref=NCBI_GP:WHI78552.1;Name=WHI78552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499797.1;locus_tag=PYH62_06950;product=hypothetical protein;protein_id=WHI78552.1;transl_table=11 CP118825.1 Genbank pseudogene 1389308 1390866 . - . ID=gene-PYH62_06955;Name=rny;gbkey=Gene;gene=rny;gene_biotype=pseudogene;locus_tag=PYH62_06955;pseudo=true CP118825.1 Protein Homology CDS 1389308 1390866 . - 0 ID=cds-PYH62_06955;Parent=gene-PYH62_06955;Note=frameshifted;Ontology_term=GO:0006402,GO:0004521;gbkey=CDS;gene=rny;go_function=endoribonuclease activity|0004521||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459258.1;locus_tag=PYH62_06955;product=ribonuclease Y;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1391130 1392176 . - . ID=gene-PYH62_06960;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=PYH62_06960 CP118825.1 Protein Homology CDS 1391130 1392176 . - 0 ID=cds-WHI78553.1;Parent=gene-PYH62_06960;Dbxref=NCBI_GP:WHI78553.1;Name=WHI78553.1;Ontology_term=GO:0006281,GO:0006310,GO:0009432,GO:0003677,GO:0008094,GO:0005737;gbkey=CDS;gene=recA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499795.2;locus_tag=PYH62_06960;product=recombinase RecA;protein_id=WHI78553.1;transl_table=11 CP118825.1 Genbank pseudogene 1392354 1393494 . - . ID=gene-PYH62_06965;Name=PYH62_06965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_06965;pseudo=true CP118825.1 Protein Homology CDS 1392354 1393494 . - 0 ID=cds-PYH62_06965;Parent=gene-PYH62_06965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455402.1;locus_tag=PYH62_06965;product=CinA family nicotinamide mononucleotide deamidase-related protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1393628 1394203 . - . ID=gene-PYH62_06970;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=PYH62_06970 CP118825.1 Protein Homology CDS 1393628 1394203 . - 0 ID=cds-WHI78554.1;Parent=gene-PYH62_06970;Dbxref=NCBI_GP:WHI78554.1;Name=WHI78554.1;Ontology_term=GO:0008654,GO:0008444;gbkey=CDS;gene=pgsA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448865.1;locus_tag=PYH62_06970;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WHI78554.1;transl_table=11 CP118825.1 Genbank gene 1394236 1394628 . - . ID=gene-PYH62_06975;Name=PYH62_06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06975 CP118825.1 Protein Homology CDS 1394236 1394628 . - 0 ID=cds-WHI78555.1;Parent=gene-PYH62_06975;Dbxref=NCBI_GP:WHI78555.1;Name=WHI78555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448763.1;locus_tag=PYH62_06975;product=helix-turn-helix domain-containing protein;protein_id=WHI78555.1;transl_table=11 CP118825.1 Genbank gene 1394649 1395449 . - . ID=gene-PYH62_06980;Name=PYH62_06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06980 CP118825.1 Protein Homology CDS 1394649 1395449 . - 0 ID=cds-WHI80254.1;Parent=gene-PYH62_06980;Dbxref=NCBI_GP:WHI80254.1;Name=WHI80254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499791.1;locus_tag=PYH62_06980;product=DUF3388 domain-containing protein;protein_id=WHI80254.1;transl_table=11 CP118825.1 Genbank gene 1395609 1396313 . - . ID=gene-PYH62_06985;Name=PYH62_06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06985 CP118825.1 Protein Homology CDS 1395609 1396313 . - 0 ID=cds-WHI78556.1;Parent=gene-PYH62_06985;Dbxref=NCBI_GP:WHI78556.1;Name=WHI78556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001662935.1;locus_tag=PYH62_06985;product=SDR family oxidoreductase;protein_id=WHI78556.1;transl_table=11 CP118825.1 Genbank gene 1396316 1397602 . - . ID=gene-PYH62_06990;Name=PYH62_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06990 CP118825.1 Protein Homology CDS 1396316 1397602 . - 0 ID=cds-WHI78557.1;Parent=gene-PYH62_06990;Dbxref=NCBI_GP:WHI78557.1;Name=WHI78557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174620.1;locus_tag=PYH62_06990;product=pitrilysin family protein;protein_id=WHI78557.1;transl_table=11 CP118825.1 Genbank gene 1397602 1398867 . - . ID=gene-PYH62_06995;Name=PYH62_06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_06995 CP118825.1 Protein Homology CDS 1397602 1398867 . - 0 ID=cds-WHI78558.1;Parent=gene-PYH62_06995;Dbxref=NCBI_GP:WHI78558.1;Name=WHI78558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448757.1;locus_tag=PYH62_06995;product=pitrilysin family protein;protein_id=WHI78558.1;transl_table=11 CP118825.1 Genbank gene 1398895 1399611 . - . ID=gene-PYH62_07000;Name=PYH62_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07000 CP118825.1 Protein Homology CDS 1398895 1399611 . - 0 ID=cds-WHI78559.1;Parent=gene-PYH62_07000;Dbxref=NCBI_GP:WHI78559.1;Name=WHI78559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448813.1;locus_tag=PYH62_07000;product=GntR family transcriptional regulator;protein_id=WHI78559.1;transl_table=11 CP118825.1 Genbank gene 1399614 1402037 . - . ID=gene-PYH62_07005;Name=PYH62_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07005 CP118825.1 Protein Homology CDS 1399614 1402037 . - 0 ID=cds-WHI78560.1;Parent=gene-PYH62_07005;Dbxref=NCBI_GP:WHI78560.1;Name=WHI78560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498353.1;locus_tag=PYH62_07005;product=DNA translocase FtsK;protein_id=WHI78560.1;transl_table=11 CP118825.1 Genbank gene 1402374 1404047 . - . ID=gene-PYH62_07010;Name=PYH62_07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07010 CP118825.1 Protein Homology CDS 1402374 1404047 . - 0 ID=cds-WHI78561.1;Parent=gene-PYH62_07010;Dbxref=NCBI_GP:WHI78561.1;Name=WHI78561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455407.1;locus_tag=PYH62_07010;product=ribonuclease J;protein_id=WHI78561.1;transl_table=11 CP118825.1 Genbank pseudogene 1404253 1406350 . - . ID=gene-PYH62_07015;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=pseudogene;locus_tag=PYH62_07015;pseudo=true CP118825.1 Protein Homology CDS 1404253 1406350 . - 0 ID=cds-PYH62_07015;Parent=gene-PYH62_07015;Note=frameshifted;Ontology_term=GO:0006402,GO:0004654;gbkey=CDS;gene=pnp;go_function=polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499784.1;locus_tag=PYH62_07015;product=polyribonucleotide nucleotidyltransferase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1406487 1406756 . - . ID=gene-PYH62_07020;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=PYH62_07020 CP118825.1 Protein Homology CDS 1406487 1406756 . - 0 ID=cds-WHI78562.1;Parent=gene-PYH62_07020;Dbxref=NCBI_GP:WHI78562.1;Name=WHI78562.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsO;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275926.1;locus_tag=PYH62_07020;product=30S ribosomal protein S15;protein_id=WHI78562.1;transl_table=11 CP118825.1 Genbank gene 1406867 1407838 . - . ID=gene-PYH62_07025;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=PYH62_07025 CP118825.1 Protein Homology CDS 1406867 1407838 . - 0 ID=cds-WHI78563.1;Parent=gene-PYH62_07025;Dbxref=NCBI_GP:WHI78563.1;Name=WHI78563.1;Ontology_term=GO:0006747,GO:0009398,GO:0003919,GO:0005737;gbkey=CDS;gene=ribF;go_component=cytoplasm|0005737||IEA;go_function=FMN adenylyltransferase activity|0003919||IEA;go_process=FAD biosynthetic process|0006747||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499782.1;locus_tag=PYH62_07025;product=riboflavin biosynthesis protein RibF;protein_id=WHI78563.1;transl_table=11 CP118825.1 Genbank gene 1407856 1408773 . - . ID=gene-PYH62_07030;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=PYH62_07030 CP118825.1 Protein Homology CDS 1407856 1408773 . - 0 ID=cds-WHI78564.1;Parent=gene-PYH62_07030;Dbxref=NCBI_GP:WHI78564.1;Name=WHI78564.1;Ontology_term=GO:0006400,GO:0004730;gbkey=CDS;gene=truB;go_function=pseudouridylate synthase activity|0004730||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275928.1;locus_tag=PYH62_07030;product=tRNA pseudouridine(55) synthase TruB;protein_id=WHI78564.1;transl_table=11 CP118825.1 Genbank gene 1408985 1409335 . - . ID=gene-PYH62_07035;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=PYH62_07035 CP118825.1 Protein Homology CDS 1408985 1409335 . - 0 ID=cds-WHI78565.1;Parent=gene-PYH62_07035;Dbxref=NCBI_GP:WHI78565.1;Name=WHI78565.1;Ontology_term=GO:0006396,GO:0019843;gbkey=CDS;gene=rbfA;go_function=rRNA binding|0019843||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499780.1;locus_tag=PYH62_07035;product=30S ribosome-binding factor RbfA;protein_id=WHI78565.1;transl_table=11 CP118825.1 Genbank gene 1409430 1411535 . - . ID=gene-PYH62_07040;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=PYH62_07040 CP118825.1 Protein Homology CDS 1409430 1411535 . - 0 ID=cds-WHI78566.1;Parent=gene-PYH62_07040;Dbxref=NCBI_GP:WHI78566.1;Name=WHI78566.1;Ontology_term=GO:0006413,GO:0003743,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499779.1;locus_tag=PYH62_07040;product=translation initiation factor IF-2;protein_id=WHI78566.1;transl_table=11 CP118825.1 Genbank gene 1411540 1411857 . - . ID=gene-PYH62_07045;Name=PYH62_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07045 CP118825.1 Protein Homology CDS 1411540 1411857 . - 0 ID=cds-WHI78567.1;Parent=gene-PYH62_07045;Dbxref=NCBI_GP:WHI78567.1;Name=WHI78567.1;Ontology_term=GO:0003723,GO:0003735;gbkey=CDS;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002512315.1;locus_tag=PYH62_07045;product=YlxQ family RNA-binding protein;protein_id=WHI78567.1;transl_table=11 CP118825.1 Genbank gene 1411854 1412138 . - . ID=gene-PYH62_07050;Name=PYH62_07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07050 CP118825.1 Protein Homology CDS 1411854 1412138 . - 0 ID=cds-WHI78568.1;Parent=gene-PYH62_07050;Dbxref=NCBI_GP:WHI78568.1;Name=WHI78568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499777.1;locus_tag=PYH62_07050;product=YlxR family protein;protein_id=WHI78568.1;transl_table=11 CP118825.1 Genbank gene 1412168 1413394 . - . ID=gene-PYH62_07055;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=PYH62_07055 CP118825.1 Protein Homology CDS 1412168 1413394 . - 0 ID=cds-WHI78569.1;Parent=gene-PYH62_07055;Dbxref=NCBI_GP:WHI78569.1;Name=WHI78569.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835114.1;locus_tag=PYH62_07055;product=transcription termination factor NusA;protein_id=WHI78569.1;transl_table=11 CP118825.1 Genbank gene 1413415 1413882 . - . ID=gene-PYH62_07060;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=PYH62_07060 CP118825.1 Protein Homology CDS 1413415 1413882 . - 0 ID=cds-WHI78570.1;Parent=gene-PYH62_07060;Dbxref=NCBI_GP:WHI78570.1;Name=WHI78570.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499775.1;locus_tag=PYH62_07060;product=ribosome maturation factor RimP;protein_id=WHI78570.1;transl_table=11 CP118825.1 Genbank gene 1414028 1418338 . - . ID=gene-PYH62_07065;Name=PYH62_07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07065 CP118825.1 Protein Homology CDS 1414028 1418338 . - 0 ID=cds-WHI80255.1;Parent=gene-PYH62_07065;Dbxref=NCBI_GP:WHI80255.1;Name=WHI80255.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499774.1;locus_tag=PYH62_07065;product=PolC-type DNA polymerase III;protein_id=WHI80255.1;transl_table=11 CP118825.1 Genbank gene 1418507 1420207 . - . ID=gene-PYH62_07070;Name=PYH62_07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07070 CP118825.1 Protein Homology CDS 1418507 1420207 . - 0 ID=cds-WHI78571.1;Parent=gene-PYH62_07070;Dbxref=NCBI_GP:WHI78571.1;Name=WHI78571.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA editing activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275937.1;locus_tag=PYH62_07070;product=proline--tRNA ligase;protein_id=WHI78571.1;transl_table=11 CP118825.1 Genbank gene 1420224 1421510 . - . ID=gene-PYH62_07075;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=PYH62_07075 CP118825.1 Protein Homology CDS 1420224 1421510 . - 0 ID=cds-WHI78572.1;Parent=gene-PYH62_07075;Dbxref=NCBI_GP:WHI78572.1;Name=WHI78572.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000121122.1;locus_tag=PYH62_07075;product=RIP metalloprotease RseP;protein_id=WHI78572.1;transl_table=11 CP118825.1 Genbank gene 1421722 1422504 . - . ID=gene-PYH62_07080;Name=PYH62_07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07080 CP118825.1 Protein Homology CDS 1421722 1422504 . - 0 ID=cds-WHI78573.1;Parent=gene-PYH62_07080;Dbxref=NCBI_GP:WHI78573.1;Name=WHI78573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459284.1;locus_tag=PYH62_07080;product=phosphatidate cytidylyltransferase;protein_id=WHI78573.1;transl_table=11 CP118825.1 Genbank gene 1422508 1423278 . - . ID=gene-PYH62_07085;Name=PYH62_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07085 CP118825.1 Protein Homology CDS 1422508 1423278 . - 0 ID=cds-WHI78574.1;Parent=gene-PYH62_07085;Dbxref=NCBI_GP:WHI78574.1;Name=WHI78574.1;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499770.1;locus_tag=PYH62_07085;product=isoprenyl transferase;protein_id=WHI78574.1;transl_table=11 CP118825.1 Genbank gene 1423464 1424018 . - . ID=gene-PYH62_07090;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=PYH62_07090 CP118825.1 Protein Homology CDS 1423464 1424018 . - 0 ID=cds-WHI78575.1;Parent=gene-PYH62_07090;Dbxref=NCBI_GP:WHI78575.1;Name=WHI78575.1;Ontology_term=GO:0006412,GO:0008135,GO:0005737;gbkey=CDS;gene=frr;go_component=cytoplasm|0005737||IEA;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275941.1;locus_tag=PYH62_07090;product=ribosome recycling factor;protein_id=WHI78575.1;transl_table=11 CP118825.1 Genbank gene 1424035 1424757 . - . ID=gene-PYH62_07095;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=PYH62_07095 CP118825.1 Protein Homology CDS 1424035 1424757 . - 0 ID=cds-WHI78576.1;Parent=gene-PYH62_07095;Dbxref=NCBI_GP:WHI78576.1;Name=WHI78576.1;Ontology_term=GO:0015949,GO:0033862;gbkey=CDS;gene=pyrH;go_function=UMP kinase activity|0033862||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000057332.1;locus_tag=PYH62_07095;product=UMP kinase;protein_id=WHI78576.1;transl_table=11 CP118825.1 Genbank gene 1424896 1425774 . - . ID=gene-PYH62_07100;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=PYH62_07100 CP118825.1 Protein Homology CDS 1424896 1425774 . - 0 ID=cds-WHI78577.1;Parent=gene-PYH62_07100;Dbxref=NCBI_GP:WHI78577.1;Name=WHI78577.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468450.1;locus_tag=PYH62_07100;product=translation elongation factor Ts;protein_id=WHI78577.1;transl_table=11 CP118825.1 Genbank pseudogene 1426035 1426824 . - . ID=gene-PYH62_07105;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=pseudogene;locus_tag=PYH62_07105;pseudo=true CP118825.1 Protein Homology CDS 1426035 1426824 . - 0 ID=cds-PYH62_07105;Parent=gene-PYH62_07105;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsB;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900141.1;locus_tag=PYH62_07105;product=30S ribosomal protein S2;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1426844 1426975 . - . ID=gene-PYH62_07110;Name=PYH62_07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07110 CP118825.1 GeneMarkS-2+ CDS 1426844 1426975 . - 0 ID=cds-WHI78578.1;Parent=gene-PYH62_07110;Dbxref=NCBI_GP:WHI78578.1;Name=WHI78578.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_07110;product=hypothetical protein;protein_id=WHI78578.1;transl_table=11 CP118825.1 Genbank gene 1427045 1427821 . - . ID=gene-PYH62_07115;Name=codY;gbkey=Gene;gene=codY;gene_biotype=protein_coding;locus_tag=PYH62_07115 CP118825.1 Protein Homology CDS 1427045 1427821 . - 0 ID=cds-WHI78579.1;Parent=gene-PYH62_07115;Dbxref=NCBI_GP:WHI78579.1;Name=WHI78579.1;Ontology_term=GO:0045892,GO:0003700;gbkey=CDS;gene=codY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499763.1;locus_tag=PYH62_07115;product=GTP-sensing pleiotropic transcriptional regulator CodY;protein_id=WHI78579.1;transl_table=11 CP118825.1 Genbank gene 1427843 1429243 . - . ID=gene-PYH62_07120;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=PYH62_07120 CP118825.1 Protein Homology CDS 1427843 1429243 . - 0 ID=cds-WHI78580.1;Parent=gene-PYH62_07120;Dbxref=NCBI_GP:WHI78580.1;Name=WHI78580.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887;gbkey=CDS;gene=hslU;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491368.1;locus_tag=PYH62_07120;product=ATP-dependent protease ATPase subunit HslU;protein_id=WHI78580.1;transl_table=11 CP118825.1 Genbank gene 1429310 1429855 . - . ID=gene-PYH62_07125;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=PYH62_07125 CP118825.1 Protein Homology CDS 1429310 1429855 . - 0 ID=cds-WHI78581.1;Parent=gene-PYH62_07125;Dbxref=NCBI_GP:WHI78581.1;Name=WHI78581.1;Ontology_term=GO:0051603,GO:0004298;gbkey=CDS;gene=hslV;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499761.1;locus_tag=PYH62_07125;product=ATP-dependent protease subunit HslV;protein_id=WHI78581.1;transl_table=11 CP118825.1 Genbank gene 1429856 1430749 . - . ID=gene-PYH62_07130;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=PYH62_07130 CP118825.1 Protein Homology CDS 1429856 1430749 . - 0 ID=cds-WHI78582.1;Parent=gene-PYH62_07130;Dbxref=NCBI_GP:WHI78582.1;Name=WHI78582.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerC;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455419.1;locus_tag=PYH62_07130;product=tyrosine recombinase XerC;protein_id=WHI78582.1;transl_table=11 CP118825.1 Genbank gene 1430887 1432194 . - . ID=gene-PYH62_07135;Name=trmFO;gbkey=Gene;gene=trmFO;gene_biotype=protein_coding;locus_tag=PYH62_07135 CP118825.1 Protein Homology CDS 1430887 1432194 . - 0 ID=cds-WHI78583.1;Parent=gene-PYH62_07135;Dbxref=NCBI_GP:WHI78583.1;Name=WHI78583.1;Ontology_term=GO:0008033,GO:0047151,GO:0050660;gbkey=CDS;gene=trmFO;go_function=methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase (FADH2-oxidizing) activity|0047151||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499759.1;locus_tag=PYH62_07135;product=FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase TrmFO;protein_id=WHI78583.1;transl_table=11 CP118825.1 Genbank gene 1432218 1434287 . - . ID=gene-PYH62_07140;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=PYH62_07140 CP118825.1 Protein Homology CDS 1432218 1434287 . - 0 ID=cds-WHI78584.1;Parent=gene-PYH62_07140;Dbxref=NCBI_GP:WHI78584.1;Name=WHI78584.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002453083.1;locus_tag=PYH62_07140;product=type I DNA topoisomerase;protein_id=WHI78584.1;transl_table=11 CP118825.1 Genbank gene 1434426 1435298 . - . ID=gene-PYH62_07145;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=PYH62_07145 CP118825.1 Protein Homology CDS 1434426 1435298 . - 0 ID=cds-WHI78585.1;Parent=gene-PYH62_07145;Dbxref=NCBI_GP:WHI78585.1;Name=WHI78585.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448769.1;locus_tag=PYH62_07145;product=DNA-processing protein DprA;protein_id=WHI78585.1;transl_table=11 CP118825.1 Genbank gene 1435556 1436461 . - . ID=gene-PYH62_07150;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=PYH62_07150 CP118825.1 Protein Homology CDS 1435556 1436461 . - 0 ID=cds-WHI78586.1;Parent=gene-PYH62_07150;Dbxref=NCBI_GP:WHI78586.1;Name=WHI78586.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835581.1;locus_tag=PYH62_07150;product=succinate--CoA ligase subunit alpha;protein_id=WHI78586.1;transl_table=11 CP118825.1 Genbank pseudogene 1436483 1437650 . - . ID=gene-PYH62_07155;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=pseudogene;locus_tag=PYH62_07155;pseudo=true CP118825.1 Protein Homology CDS 1436483 1437650 . - 0 ID=cds-PYH62_07155;Parent=gene-PYH62_07155;Note=frameshifted;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006190114.1;locus_tag=PYH62_07155;product=ADP-forming succinate--CoA ligase subunit beta;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1437777 1438544 . - . ID=gene-PYH62_07160;Name=PYH62_07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07160 CP118825.1 Protein Homology CDS 1437777 1438544 . - 0 ID=cds-WHI78587.1;Parent=gene-PYH62_07160;Dbxref=NCBI_GP:WHI78587.1;Name=WHI78587.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455424.1;locus_tag=PYH62_07160;product=ribonuclease HII;protein_id=WHI78587.1;transl_table=11 CP118825.1 Genbank gene 1438528 1439412 . - . ID=gene-PYH62_07165;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=PYH62_07165 CP118825.1 Protein Homology CDS 1438528 1439412 . - 0 ID=cds-WHI78588.1;Parent=gene-PYH62_07165;Dbxref=NCBI_GP:WHI78588.1;Name=WHI78588.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499751.1;locus_tag=PYH62_07165;product=ribosome biogenesis GTPase YlqF;protein_id=WHI78588.1;transl_table=11 CP118825.1 Genbank gene 1439668 1442274 . + . ID=gene-PYH62_07170;Name=PYH62_07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07170 CP118825.1 Protein Homology CDS 1439668 1442274 . + 0 ID=cds-WHI78589.1;Parent=gene-PYH62_07170;Dbxref=NCBI_GP:WHI78589.1;Name=WHI78589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455426.1;locus_tag=PYH62_07170;product=YfhO family protein;protein_id=WHI78589.1;transl_table=11 CP118825.1 Genbank gene 1442264 1444888 . + . ID=gene-PYH62_07175;Name=PYH62_07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07175 CP118825.1 Protein Homology CDS 1442264 1444888 . + 0 ID=cds-WHI78590.1;Parent=gene-PYH62_07175;Dbxref=NCBI_GP:WHI78590.1;Name=WHI78590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455427.1;locus_tag=PYH62_07175;product=YfhO family protein;protein_id=WHI78590.1;transl_table=11 CP118825.1 Genbank pseudogene 1445279 1445752 . + . ID=gene-PYH62_07180;Name=PYH62_07180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_07180;pseudo=true CP118825.1 Protein Homology CDS 1445279 1445752 . + 0 ID=cds-PYH62_07180;Parent=gene-PYH62_07180;Note=internal stop%3B incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494449.1;locus_tag=PYH62_07180;product=transposase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1445827 1446177 . - . ID=gene-PYH62_07185;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=PYH62_07185 CP118825.1 Protein Homology CDS 1445827 1446177 . - 0 ID=cds-WHI78591.1;Parent=gene-PYH62_07185;Dbxref=NCBI_GP:WHI78591.1;Name=WHI78591.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303276.1;locus_tag=PYH62_07185;product=50S ribosomal protein L19;protein_id=WHI78591.1;transl_table=11 CP118825.1 Genbank gene 1446282 1447019 . - . ID=gene-PYH62_07190;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=PYH62_07190 CP118825.1 Protein Homology CDS 1446282 1447019 . - 0 ID=cds-WHI78592.1;Parent=gene-PYH62_07190;Dbxref=NCBI_GP:WHI78592.1;Name=WHI78592.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N(1))-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275960.1;locus_tag=PYH62_07190;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WHI78592.1;transl_table=11 CP118825.1 Genbank gene 1447019 1447519 . - . ID=gene-PYH62_07195;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=PYH62_07195 CP118825.1 Protein Homology CDS 1447019 1447519 . - 0 ID=cds-WHI78593.1;Parent=gene-PYH62_07195;Dbxref=NCBI_GP:WHI78593.1;Name=WHI78593.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0003723;gbkey=CDS;gene=rimM;go_function=RNA binding|0003723||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499746.1;locus_tag=PYH62_07195;product=ribosome maturation factor RimM;protein_id=WHI78593.1;transl_table=11 CP118825.1 Genbank gene 1447651 1447926 . - . ID=gene-PYH62_07200;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=PYH62_07200 CP118825.1 Protein Homology CDS 1447651 1447926 . - 0 ID=cds-WHI78594.1;Parent=gene-PYH62_07200;Dbxref=NCBI_GP:WHI78594.1;Name=WHI78594.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499745.1;locus_tag=PYH62_07200;product=30S ribosomal protein S16;protein_id=WHI78594.1;transl_table=11 CP118825.1 Genbank gene 1448188 1449558 . - . ID=gene-PYH62_07205;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=PYH62_07205 CP118825.1 Protein Homology CDS 1448188 1449558 . - 0 ID=cds-WHI78595.1;Parent=gene-PYH62_07205;Dbxref=NCBI_GP:WHI78595.1;Name=WHI78595.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457378.1;locus_tag=PYH62_07205;product=signal recognition particle protein;protein_id=WHI78595.1;transl_table=11 CP118825.1 Genbank gene 1449579 1449911 . - . ID=gene-PYH62_07210;Name=PYH62_07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07210 CP118825.1 Protein Homology CDS 1449579 1449911 . - 0 ID=cds-WHI78596.1;Parent=gene-PYH62_07210;Dbxref=NCBI_GP:WHI78596.1;Name=WHI78596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499743.1;locus_tag=PYH62_07210;product=putative DNA-binding protein;protein_id=WHI78596.1;transl_table=11 CP118825.1 Genbank gene 1449898 1451127 . - . ID=gene-PYH62_07215;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=PYH62_07215 CP118825.1 Protein Homology CDS 1449898 1451127 . - 0 ID=cds-WHI78597.1;Parent=gene-PYH62_07215;Dbxref=NCBI_GP:WHI78597.1;Name=WHI78597.1;Ontology_term=GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448765.1;locus_tag=PYH62_07215;product=signal recognition particle-docking protein FtsY;protein_id=WHI78597.1;transl_table=11 CP118825.1 Genbank gene 1451124 1454693 . - . ID=gene-PYH62_07220;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=PYH62_07220 CP118825.1 Protein Homology CDS 1451124 1454693 . - 0 ID=cds-WHI78598.1;Parent=gene-PYH62_07220;Dbxref=NCBI_GP:WHI78598.1;Name=WHI78598.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505738.1;locus_tag=PYH62_07220;product=chromosome segregation protein SMC;protein_id=WHI78598.1;transl_table=11 CP118825.1 Genbank gene 1454763 1455497 . - . ID=gene-PYH62_07225;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=PYH62_07225 CP118825.1 Protein Homology CDS 1454763 1455497 . - 0 ID=cds-WHI80256.1;Parent=gene-PYH62_07225;Dbxref=NCBI_GP:WHI80256.1;Name=WHI80256.1;Ontology_term=GO:0006396,GO:0004525;gbkey=CDS;gene=rnc;go_function=ribonuclease III activity|0004525||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455433.1;locus_tag=PYH62_07225;product=ribonuclease III;protein_id=WHI80256.1;transl_table=11 CP118825.1 Genbank gene 1455576 1455809 . - . ID=gene-PYH62_07230;Name=PYH62_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07230 CP118825.1 Protein Homology CDS 1455576 1455809 . - 0 ID=cds-WHI78599.1;Parent=gene-PYH62_07230;Dbxref=NCBI_GP:WHI78599.1;Name=WHI78599.1;Ontology_term=GO:0006633;gbkey=CDS;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002510960.1;locus_tag=PYH62_07230;product=acyl carrier protein;protein_id=WHI78599.1;transl_table=11 CP118825.1 Genbank pseudogene 1455936 1456671 . - . ID=gene-PYH62_07235;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=pseudogene;locus_tag=PYH62_07235;pseudo=true CP118825.1 Protein Homology CDS 1455936 1456671 . - 0 ID=cds-PYH62_07235;Parent=gene-PYH62_07235;Note=frameshifted;Ontology_term=GO:0006633,GO:0004316;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499737.1;locus_tag=PYH62_07235;product=3-oxoacyl-[acyl-carrier-protein] reductase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1456664 1457590 . - . ID=gene-PYH62_07240;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=PYH62_07240 CP118825.1 Protein Homology CDS 1456664 1457590 . - 0 ID=cds-WHI78600.1;Parent=gene-PYH62_07240;Dbxref=NCBI_GP:WHI78600.1;Name=WHI78600.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499736.1;locus_tag=PYH62_07240;product=ACP S-malonyltransferase;protein_id=WHI78600.1;transl_table=11 CP118825.1 Genbank pseudogene 1457583 1458570 . - . ID=gene-PYH62_07245;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=pseudogene;locus_tag=PYH62_07245;pseudo=true CP118825.1 Protein Homology CDS 1457583 1458570 . - 0 ID=cds-PYH62_07245;Parent=gene-PYH62_07245;Note=frameshifted;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499735.1;locus_tag=PYH62_07245;product=phosphate acyltransferase PlsX;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1458563 1459132 . - . ID=gene-PYH62_07250;Name=fapR;gbkey=Gene;gene=fapR;gene_biotype=protein_coding;locus_tag=PYH62_07250 CP118825.1 Protein Homology CDS 1458563 1459132 . - 0 ID=cds-WHI78601.1;Parent=gene-PYH62_07250;Dbxref=NCBI_GP:WHI78601.1;Name=WHI78601.1;Ontology_term=GO:0045717,GO:0045892,GO:0003700;gbkey=CDS;gene=fapR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of fatty acid biosynthetic process|0045717||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174579.1;locus_tag=PYH62_07250;product=transcription factor FapR;protein_id=WHI78601.1;transl_table=11 CP118825.1 Genbank pseudogene 1459271 1461321 . - . ID=gene-PYH62_07255;Name=recG;gbkey=Gene;gene=recG;gene_biotype=pseudogene;locus_tag=PYH62_07255;pseudo=true CP118825.1 Protein Homology CDS 1459271 1461321 . - 0 ID=cds-PYH62_07255;Parent=gene-PYH62_07255;Note=frameshifted;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499733.1;locus_tag=PYH62_07255;product=ATP-dependent DNA helicase RecG;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1461905 1463563 . - . ID=gene-PYH62_07260;Name=fakA;gbkey=Gene;gene=fakA;gene_biotype=protein_coding;locus_tag=PYH62_07260 CP118825.1 Protein Homology CDS 1461905 1463563 . - 0 ID=cds-WHI78602.1;Parent=gene-PYH62_07260;Dbxref=NCBI_GP:WHI78602.1;Name=WHI78602.1;gbkey=CDS;gene=fakA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499732.1;locus_tag=PYH62_07260;product=fatty acid kinase catalytic subunit FakA;protein_id=WHI78602.1;transl_table=11 CP118825.1 Genbank gene 1463578 1463952 . - . ID=gene-PYH62_07265;Name=PYH62_07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07265 CP118825.1 Protein Homology CDS 1463578 1463952 . - 0 ID=cds-WHI78603.1;Parent=gene-PYH62_07265;Dbxref=NCBI_GP:WHI78603.1;Name=WHI78603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494961.1;locus_tag=PYH62_07265;product=Asp23/Gls24 family envelope stress response protein;protein_id=WHI78603.1;transl_table=11 CP118825.1 Genbank gene 1464222 1464410 . + . ID=gene-PYH62_07270;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=PYH62_07270 CP118825.1 Protein Homology CDS 1464222 1464410 . + 0 ID=cds-WHI78604.1;Parent=gene-PYH62_07270;Dbxref=NCBI_GP:WHI78604.1;Name=WHI78604.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rpmB;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014614133.1;locus_tag=PYH62_07270;product=50S ribosomal protein L28;protein_id=WHI78604.1;transl_table=11 CP118825.1 Genbank gene 1464462 1465103 . - . ID=gene-PYH62_07275;Name=PYH62_07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07275 CP118825.1 Protein Homology CDS 1464462 1465103 . - 0 ID=cds-WHI78605.1;Parent=gene-PYH62_07275;Dbxref=NCBI_GP:WHI78605.1;Name=WHI78605.1;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448825.1;locus_tag=PYH62_07275;product=thiamine diphosphokinase;protein_id=WHI78605.1;transl_table=11 CP118825.1 Genbank gene 1465108 1465752 . - . ID=gene-PYH62_07280;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=PYH62_07280 CP118825.1 Protein Homology CDS 1465108 1465752 . - 0 ID=cds-WHI78606.1;Parent=gene-PYH62_07280;Dbxref=NCBI_GP:WHI78606.1;Name=WHI78606.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000164336.1;locus_tag=PYH62_07280;product=ribulose-phosphate 3-epimerase;protein_id=WHI78606.1;transl_table=11 CP118825.1 Genbank gene 1465752 1466627 . - . ID=gene-PYH62_07285;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=PYH62_07285 CP118825.1 Protein Homology CDS 1465752 1466627 . - 0 ID=cds-WHI78607.1;Parent=gene-PYH62_07285;Dbxref=NCBI_GP:WHI78607.1;Name=WHI78607.1;Ontology_term=GO:0006412,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275979.1;locus_tag=PYH62_07285;product=ribosome small subunit-dependent GTPase A;protein_id=WHI78607.1;transl_table=11 CP118825.1 Genbank pseudogene 1466926 1468949 . - . ID=gene-PYH62_07290;Name=pknB;gbkey=Gene;gene=pknB;gene_biotype=pseudogene;locus_tag=PYH62_07290;pseudo=true CP118825.1 Protein Homology CDS 1466926 1468949 . - 0 ID=cds-PYH62_07290;Parent=gene-PYH62_07290;Note=frameshifted;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;gene=pknB;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448778.1;locus_tag=PYH62_07290;product=Stk1 family PASTA domain-containing Ser/Thr kinase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1468946 1469689 . - . ID=gene-PYH62_07295;Name=PYH62_07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07295 CP118825.1 Protein Homology CDS 1468946 1469689 . - 0 ID=cds-WHI78608.1;Parent=gene-PYH62_07295;Dbxref=NCBI_GP:WHI78608.1;Name=WHI78608.1;Ontology_term=GO:0006470,GO:0004722;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001574427.1;locus_tag=PYH62_07295;product=Stp1/IreP family PP2C-type Ser/Thr phosphatase;protein_id=WHI78608.1;transl_table=11 CP118825.1 Genbank pseudogene 1469695 1470788 . - . ID=gene-PYH62_07300;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=pseudogene;locus_tag=PYH62_07300;pseudo=true CP118825.1 Protein Homology CDS 1469695 1470788 . - 0 ID=cds-PYH62_07300;Parent=gene-PYH62_07300;Note=frameshifted;Ontology_term=GO:0031167,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435140.1;locus_tag=PYH62_07300;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1470790 1472097 . - . ID=gene-PYH62_07305;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=PYH62_07305 CP118825.1 Protein Homology CDS 1470790 1472097 . - 0 ID=cds-WHI78609.1;Parent=gene-PYH62_07305;Dbxref=NCBI_GP:WHI78609.1;Name=WHI78609.1;Ontology_term=GO:0001510,GO:0006355,GO:0003723,GO:0008168;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,methyltransferase activity|0008168||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439457.1;locus_tag=PYH62_07305;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WHI78609.1;transl_table=11 CP118825.1 Genbank gene 1472094 1473026 . - . ID=gene-PYH62_07310;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=PYH62_07310 CP118825.1 Protein Homology CDS 1472094 1473026 . - 0 ID=cds-WHI78610.1;Parent=gene-PYH62_07310;Dbxref=NCBI_GP:WHI78610.1;Name=WHI78610.1;Ontology_term=GO:0006431,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499722.1;locus_tag=PYH62_07310;product=methionyl-tRNA formyltransferase;protein_id=WHI78610.1;transl_table=11 CP118825.1 Genbank gene 1473019 1473507 . - . ID=gene-PYH62_07315;Name=PYH62_07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07315 CP118825.1 Protein Homology CDS 1473019 1473507 . - 0 ID=cds-WHI78611.1;Parent=gene-PYH62_07315;Dbxref=NCBI_GP:WHI78611.1;Name=WHI78611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001655756.1;locus_tag=PYH62_07315;product=peptide deformylase;protein_id=WHI78611.1;transl_table=11 CP118825.1 Genbank gene 1473684 1473887 . + . ID=gene-PYH62_07320;Name=PYH62_07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07320 CP118825.1 Protein Homology CDS 1473684 1473887 . + 0 ID=cds-WHI78612.1;Parent=gene-PYH62_07320;Dbxref=NCBI_GP:WHI78612.1;Name=WHI78612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830141.1;locus_tag=PYH62_07320;product=TM2 domain-containing protein;protein_id=WHI78612.1;transl_table=11 CP118825.1 Genbank gene 1473947 1476355 . - . ID=gene-PYH62_07325;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=PYH62_07325 CP118825.1 Protein Homology CDS 1473947 1476355 . - 0 ID=cds-WHI78613.1;Parent=gene-PYH62_07325;Dbxref=NCBI_GP:WHI78613.1;Name=WHI78613.1;Ontology_term=GO:0006260,GO:0032508,GO:0003678;gbkey=CDS;gene=priA;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA duplex unwinding|0032508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499718.1;locus_tag=PYH62_07325;product=primosomal protein N';protein_id=WHI78613.1;transl_table=11 CP118825.1 Genbank gene 1476355 1477563 . - . ID=gene-PYH62_07330;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=PYH62_07330 CP118825.1 Protein Homology CDS 1476355 1477563 . - 0 ID=cds-WHI78614.1;Parent=gene-PYH62_07330;Dbxref=NCBI_GP:WHI78614.1;Name=WHI78614.1;Ontology_term=GO:0015937,GO:0015939,GO:0004632,GO:0004633;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate metabolic process|0015939||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499717.1;locus_tag=PYH62_07330;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WHI78614.1;transl_table=11 CP118825.1 Genbank gene 1477821 1478033 . - . ID=gene-PYH62_07335;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=PYH62_07335 CP118825.1 Protein Homology CDS 1477821 1478033 . - 0 ID=cds-WHI78615.1;Parent=gene-PYH62_07335;Dbxref=NCBI_GP:WHI78615.1;Name=WHI78615.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoZ;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448867.1;locus_tag=PYH62_07335;product=DNA-directed RNA polymerase subunit omega;protein_id=WHI78615.1;transl_table=11 CP118825.1 Genbank gene 1478033 1478656 . - . ID=gene-PYH62_07340;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=PYH62_07340 CP118825.1 Protein Homology CDS 1478033 1478656 . - 0 ID=cds-WHI78616.1;Parent=gene-PYH62_07340;Dbxref=NCBI_GP:WHI78616.1;Name=WHI78616.1;Ontology_term=GO:0015949,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499715.1;locus_tag=PYH62_07340;product=guanylate kinase;protein_id=WHI78616.1;transl_table=11 CP118825.1 Genbank gene 1478815 1480518 . + . ID=gene-PYH62_07345;Name=PYH62_07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07345 CP118825.1 Protein Homology CDS 1478815 1480518 . + 0 ID=cds-WHI78617.1;Parent=gene-PYH62_07345;Dbxref=NCBI_GP:WHI78617.1;Name=WHI78617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174565.1;locus_tag=PYH62_07345;product=NFACT family protein;protein_id=WHI78617.1;transl_table=11 CP118825.1 Genbank gene 1480588 1480992 . - . ID=gene-PYH62_07350;Name=PYH62_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07350 CP118825.1 Protein Homology CDS 1480588 1480992 . - 0 ID=cds-WHI78618.1;Parent=gene-PYH62_07350;Dbxref=NCBI_GP:WHI78618.1;Name=WHI78618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174564.1;locus_tag=PYH62_07350;product=VOC family protein;protein_id=WHI78618.1;transl_table=11 CP118825.1 Genbank gene 1481312 1481536 . - . ID=gene-PYH62_07355;Name=PYH62_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07355 CP118825.1 Protein Homology CDS 1481312 1481536 . - 0 ID=cds-WHI78619.1;Parent=gene-PYH62_07355;Dbxref=NCBI_GP:WHI78619.1;Name=WHI78619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455445.1;locus_tag=PYH62_07355;product=hypothetical protein;protein_id=WHI78619.1;transl_table=11 CP118825.1 Genbank gene 1481551 1482159 . - . ID=gene-PYH62_07360;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=PYH62_07360 CP118825.1 Protein Homology CDS 1481551 1482159 . - 0 ID=cds-WHI78620.1;Parent=gene-PYH62_07360;Dbxref=NCBI_GP:WHI78620.1;Name=WHI78620.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011275994.1;locus_tag=PYH62_07360;product=orotate phosphoribosyltransferase;protein_id=WHI78620.1;transl_table=11 CP118825.1 Genbank gene 1482161 1482853 . - . ID=gene-PYH62_07365;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=PYH62_07365 CP118825.1 Protein Homology CDS 1482161 1482853 . - 0 ID=cds-WHI78621.1;Parent=gene-PYH62_07365;Dbxref=NCBI_GP:WHI78621.1;Name=WHI78621.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457397.1;locus_tag=PYH62_07365;product=orotidine-5'-phosphate decarboxylase;protein_id=WHI78621.1;transl_table=11 CP118825.1 Genbank gene 1482954 1486127 . - . ID=gene-PYH62_07370;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=PYH62_07370 CP118825.1 Protein Homology CDS 1482954 1486127 . - 0 ID=cds-WHI78622.1;Parent=gene-PYH62_07370;Dbxref=NCBI_GP:WHI78622.1;Name=WHI78622.1;Ontology_term=GO:0006807,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499709.1;locus_tag=PYH62_07370;product=carbamoyl-phosphate synthase large subunit;protein_id=WHI78622.1;transl_table=11 CP118825.1 Genbank gene 1486120 1487226 . - . ID=gene-PYH62_07375;Name=PYH62_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07375 CP118825.1 Protein Homology CDS 1486120 1487226 . - 0 ID=cds-WHI78623.1;Parent=gene-PYH62_07375;Dbxref=NCBI_GP:WHI78623.1;Name=WHI78623.1;Ontology_term=GO:0006541,GO:0004088;gbkey=CDS;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363437.1;locus_tag=PYH62_07375;product=carbamoyl phosphate synthase small subunit;protein_id=WHI78623.1;transl_table=11 CP118825.1 Genbank gene 1487228 1488502 . - . ID=gene-PYH62_07380;Name=PYH62_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07380 CP118825.1 Protein Homology CDS 1487228 1488502 . - 0 ID=cds-WHI78624.1;Parent=gene-PYH62_07380;Dbxref=NCBI_GP:WHI78624.1;Name=WHI78624.1;Ontology_term=GO:0006221,GO:0004151,GO:0046872;gbkey=CDS;go_function=dihydroorotase activity|0004151||IEA,metal ion binding|0046872||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499707.1;locus_tag=PYH62_07380;product=dihydroorotase;protein_id=WHI78624.1;transl_table=11 CP118825.1 Genbank gene 1488505 1489398 . - . ID=gene-PYH62_07385;Name=PYH62_07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07385 CP118825.1 Protein Homology CDS 1488505 1489398 . - 0 ID=cds-WHI78625.1;Parent=gene-PYH62_07385;Dbxref=NCBI_GP:WHI78625.1;Name=WHI78625.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174557.1;locus_tag=PYH62_07385;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WHI78625.1;transl_table=11 CP118825.1 Genbank pseudogene 1489424 1490738 . - . ID=gene-PYH62_07390;Name=PYH62_07390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_07390;pseudo=true CP118825.1 Protein Homology CDS 1489424 1490738 . - 0 ID=cds-PYH62_07390;Parent=gene-PYH62_07390;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835566.1;locus_tag=PYH62_07390;product=solute carrier family 23 protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1490963 1491490 . - . ID=gene-PYH62_07395;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=PYH62_07395 CP118825.1 Protein Homology CDS 1490963 1491490 . - 0 ID=cds-WHI78626.1;Parent=gene-PYH62_07395;Dbxref=NCBI_GP:WHI78626.1;Name=WHI78626.1;gbkey=CDS;gene=pyrR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499704.1;locus_tag=PYH62_07395;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WHI78626.1;transl_table=11 CP118825.1 Genbank gene 1491758 1492675 . - . ID=gene-PYH62_07400;Name=PYH62_07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07400 CP118825.1 Protein Homology CDS 1491758 1492675 . - 0 ID=cds-WHI78627.1;Parent=gene-PYH62_07400;Dbxref=NCBI_GP:WHI78627.1;Name=WHI78627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499703.1;locus_tag=PYH62_07400;product=RluA family pseudouridine synthase;protein_id=WHI78627.1;transl_table=11 CP118825.1 Genbank gene 1492687 1493163 . - . ID=gene-PYH62_07405;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=PYH62_07405 CP118825.1 Protein Homology CDS 1492687 1493163 . - 0 ID=cds-WHI78628.1;Parent=gene-PYH62_07405;Dbxref=NCBI_GP:WHI78628.1;Name=WHI78628.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276003.1;locus_tag=PYH62_07405;product=signal peptidase II;protein_id=WHI78628.1;transl_table=11 CP118825.1 Genbank gene 1493248 1493724 . - . ID=gene-PYH62_07410;Name=PYH62_07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07410 CP118825.1 Protein Homology CDS 1493248 1493724 . - 0 ID=cds-WHI78629.1;Parent=gene-PYH62_07410;Dbxref=NCBI_GP:WHI78629.1;Name=WHI78629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455452.1;locus_tag=PYH62_07410;product=CHAP domain-containing protein;protein_id=WHI78629.1;transl_table=11 CP118825.1 Genbank gene 1493729 1494523 . - . ID=gene-PYH62_07415;Name=PYH62_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07415 CP118825.1 Protein Homology CDS 1493729 1494523 . - 0 ID=cds-WHI78630.1;Parent=gene-PYH62_07415;Dbxref=NCBI_GP:WHI78630.1;Name=WHI78630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448857.1;locus_tag=PYH62_07415;product=VOC family protein;protein_id=WHI78630.1;transl_table=11 CP118825.1 Genbank gene 1494716 1496125 . - . ID=gene-PYH62_07420;Name=PYH62_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07420 CP118825.1 Protein Homology CDS 1494716 1496125 . - 0 ID=cds-WHI80257.1;Parent=gene-PYH62_07420;Dbxref=NCBI_GP:WHI80257.1;Name=WHI80257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488683.1;locus_tag=PYH62_07420;product=NAD(P)H-binding protein;protein_id=WHI80257.1;transl_table=11 CP118825.1 Genbank gene 1496322 1499072 . - . ID=gene-PYH62_07425;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=PYH62_07425 CP118825.1 Protein Homology CDS 1496322 1499072 . - 0 ID=cds-WHI78631.1;Parent=gene-PYH62_07425;Dbxref=NCBI_GP:WHI78631.1;Name=WHI78631.1;Ontology_term=GO:0006428,GO:0004822,GO:0005737;gbkey=CDS;gene=ileS;go_component=cytoplasm|0005737||IEA;go_function=isoleucine-tRNA ligase activity|0004822||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499699.1;locus_tag=PYH62_07425;product=isoleucine--tRNA ligase;protein_id=WHI78631.1;transl_table=11 CP118825.1 Genbank gene 1499292 1499972 . - . ID=gene-PYH62_07430;Name=PYH62_07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07430 CP118825.1 Protein Homology CDS 1499292 1499972 . - 0 ID=cds-WHI78632.1;Parent=gene-PYH62_07430;Dbxref=NCBI_GP:WHI78632.1;Name=WHI78632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174549.1;locus_tag=PYH62_07430;product=DivIVA domain-containing protein;protein_id=WHI78632.1;transl_table=11 CP118825.1 Genbank gene 1500036 1500809 . - . ID=gene-PYH62_07435;Name=PYH62_07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07435 CP118825.1 Protein Homology CDS 1500036 1500809 . - 0 ID=cds-WHI80258.1;Parent=gene-PYH62_07435;Dbxref=NCBI_GP:WHI80258.1;Name=WHI80258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442434.1;locus_tag=PYH62_07435;product=RNA-binding protein;protein_id=WHI80258.1;transl_table=11 CP118825.1 Genbank gene 1500885 1501181 . - . ID=gene-PYH62_07440;Name=PYH62_07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07440 CP118825.1 Protein Homology CDS 1500885 1501181 . - 0 ID=cds-WHI78633.1;Parent=gene-PYH62_07440;Dbxref=NCBI_GP:WHI78633.1;Name=WHI78633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455457.1;locus_tag=PYH62_07440;product=YggT family protein;protein_id=WHI78633.1;transl_table=11 CP118825.1 Genbank gene 1501204 1501794 . - . ID=gene-PYH62_07445;Name=PYH62_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07445 CP118825.1 Protein Homology CDS 1501204 1501794 . - 0 ID=cds-WHI78634.1;Parent=gene-PYH62_07445;Dbxref=NCBI_GP:WHI78634.1;Name=WHI78634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276011.1;locus_tag=PYH62_07445;product=cell division protein SepF;protein_id=WHI78634.1;transl_table=11 CP118825.1 Genbank gene 1501800 1502474 . - . ID=gene-PYH62_07450;Name=PYH62_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07450 CP118825.1 Protein Homology CDS 1501800 1502474 . - 0 ID=cds-WHI78635.1;Parent=gene-PYH62_07450;Dbxref=NCBI_GP:WHI78635.1;Name=WHI78635.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001263997.1;locus_tag=PYH62_07450;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WHI78635.1;transl_table=11 CP118825.1 Genbank gene 1502537 1503331 . - . ID=gene-PYH62_07455;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=PYH62_07455 CP118825.1 Protein Homology CDS 1502537 1503331 . - 0 ID=cds-WHI78636.1;Parent=gene-PYH62_07455;Dbxref=NCBI_GP:WHI78636.1;Name=WHI78636.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455460.1;locus_tag=PYH62_07455;product=peptidoglycan editing factor PgeF;protein_id=WHI78636.1;transl_table=11 CP118825.1 Genbank gene 1503522 1504703 . - . ID=gene-PYH62_07460;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=PYH62_07460 CP118825.1 Protein Homology CDS 1503522 1504703 . - 0 ID=cds-WHI78637.1;Parent=gene-PYH62_07460;Dbxref=NCBI_GP:WHI78637.1;Name=WHI78637.1;Ontology_term=GO:0000910,GO:0003924;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499692.1;locus_tag=PYH62_07460;product=cell division protein FtsZ;protein_id=WHI78637.1;transl_table=11 CP118825.1 Genbank gene 1504733 1506166 . - . ID=gene-PYH62_07465;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=PYH62_07465 CP118825.1 Protein Homology CDS 1504733 1506166 . - 0 ID=cds-WHI78638.1;Parent=gene-PYH62_07465;Dbxref=NCBI_GP:WHI78638.1;Name=WHI78638.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499691.1;locus_tag=PYH62_07465;product=cell division protein FtsA;protein_id=WHI78638.1;transl_table=11 CP118825.1 Genbank gene 1506270 1507415 . - . ID=gene-PYH62_07470;Name=PYH62_07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07470 CP118825.1 Protein Homology CDS 1506270 1507415 . - 0 ID=cds-WHI78639.1;Parent=gene-PYH62_07470;Dbxref=NCBI_GP:WHI78639.1;Name=WHI78639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455461.1;locus_tag=PYH62_07470;product=FtsQ-type POTRA domain-containing protein;protein_id=WHI78639.1;transl_table=11 CP118825.1 Genbank gene 1507434 1508780 . - . ID=gene-PYH62_07475;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=PYH62_07475 CP118825.1 Protein Homology CDS 1507434 1508780 . - 0 ID=cds-WHI78640.1;Parent=gene-PYH62_07475;Dbxref=NCBI_GP:WHI78640.1;Name=WHI78640.1;Ontology_term=GO:0009252,GO:0008764;gbkey=CDS;gene=murD;go_function=UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017174541.1;locus_tag=PYH62_07475;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WHI78640.1;transl_table=11 CP118825.1 Genbank gene 1508782 1509747 . - . ID=gene-PYH62_07480;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=PYH62_07480 CP118825.1 Protein Homology CDS 1508782 1509747 . - 0 ID=cds-WHI78641.1;Parent=gene-PYH62_07480;Dbxref=NCBI_GP:WHI78641.1;Name=WHI78641.1;Ontology_term=GO:0009252,GO:0008963;gbkey=CDS;gene=mraY;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499688.1;locus_tag=PYH62_07480;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WHI78641.1;transl_table=11 CP118825.1 Genbank gene 1509922 1512168 . - . ID=gene-PYH62_07485;Name=PYH62_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07485 CP118825.1 Protein Homology CDS 1509922 1512168 . - 0 ID=cds-WHI78642.1;Parent=gene-PYH62_07485;Dbxref=NCBI_GP:WHI78642.1;Name=WHI78642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020368615.1;locus_tag=PYH62_07485;product=penicillin-binding protein;protein_id=WHI78642.1;transl_table=11 CP118825.1 Genbank gene 1512149 1512550 . - . ID=gene-PYH62_07490;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=PYH62_07490 CP118825.1 Protein Homology CDS 1512149 1512550 . - 0 ID=cds-WHI78643.1;Parent=gene-PYH62_07490;Dbxref=NCBI_GP:WHI78643.1;Name=WHI78643.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446224.1;locus_tag=PYH62_07490;product=cell division protein FtsL;protein_id=WHI78643.1;transl_table=11 CP118825.1 Genbank gene 1512564 1513499 . - . ID=gene-PYH62_07495;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=PYH62_07495 CP118825.1 Protein Homology CDS 1512564 1513499 . - 0 ID=cds-WHI78644.1;Parent=gene-PYH62_07495;Dbxref=NCBI_GP:WHI78644.1;Name=WHI78644.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017724209.1;locus_tag=PYH62_07495;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WHI78644.1;transl_table=11 CP118825.1 Genbank gene 1513514 1513945 . - . ID=gene-PYH62_07500;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=PYH62_07500 CP118825.1 Protein Homology CDS 1513514 1513945 . - 0 ID=cds-WHI78645.1;Parent=gene-PYH62_07500;Dbxref=NCBI_GP:WHI78645.1;Name=WHI78645.1;Ontology_term=GO:0051302,GO:0043565;gbkey=CDS;gene=mraZ;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of cell division|0051302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015900043.1;locus_tag=PYH62_07500;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WHI78645.1;transl_table=11 CP118825.1 Genbank gene 1514088 1515701 . - . ID=gene-PYH62_07505;Name=bshC;gbkey=Gene;gene=bshC;gene_biotype=protein_coding;locus_tag=PYH62_07505 CP118825.1 Protein Homology CDS 1514088 1515701 . - 0 ID=cds-WHI78646.1;Parent=gene-PYH62_07505;Dbxref=NCBI_GP:WHI78646.1;Name=WHI78646.1;Ontology_term=GO:0071793,GO:0003824;gbkey=CDS;gene=bshC;go_function=catalytic activity|0003824||IEA;go_process=bacillithiol biosynthetic process|0071793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276023.1;locus_tag=PYH62_07505;product=bacillithiol biosynthesis cysteine-adding enzyme BshC;protein_id=WHI78646.1;transl_table=11 CP118825.1 Genbank gene 1516082 1516771 . - . ID=gene-PYH62_07510;Name=PYH62_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07510 CP118825.1 Protein Homology CDS 1516082 1516771 . - 0 ID=cds-WHI78647.1;Parent=gene-PYH62_07510;Dbxref=NCBI_GP:WHI78647.1;Name=WHI78647.1;Ontology_term=GO:0008253;gbkey=CDS;go_function=5'-nucleotidase activity|0008253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448764.1;locus_tag=PYH62_07510;product=YjjG family noncanonical pyrimidine nucleotidase;protein_id=WHI78647.1;transl_table=11 CP118825.1 Genbank gene 1516897 1517031 . - . ID=gene-PYH62_07515;Name=PYH62_07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07515 CP118825.1 Protein Homology CDS 1516897 1517031 . - 0 ID=cds-WHI78648.1;Parent=gene-PYH62_07515;Dbxref=NCBI_GP:WHI78648.1;Name=WHI78648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830095.1;locus_tag=PYH62_07515;product=beta-class phenol-soluble modulin;protein_id=WHI78648.1;transl_table=11 CP118825.1 Genbank gene 1517074 1517208 . - . ID=gene-PYH62_07520;Name=PYH62_07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07520 CP118825.1 Protein Homology CDS 1517074 1517208 . - 0 ID=cds-WHI78649.1;Parent=gene-PYH62_07520;Dbxref=NCBI_GP:WHI78649.1;Name=WHI78649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830095.1;locus_tag=PYH62_07520;product=beta-class phenol-soluble modulin;protein_id=WHI78649.1;transl_table=11 CP118825.1 Genbank gene 1517243 1517377 . - . ID=gene-PYH62_07525;Name=PYH62_07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07525 CP118825.1 Protein Homology CDS 1517243 1517377 . - 0 ID=cds-WHI78650.1;Parent=gene-PYH62_07525;Dbxref=NCBI_GP:WHI78650.1;Name=WHI78650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830095.1;locus_tag=PYH62_07525;product=beta-class phenol-soluble modulin;protein_id=WHI78650.1;transl_table=11 CP118825.1 Genbank gene 1517420 1517554 . - . ID=gene-PYH62_07530;Name=PYH62_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07530 CP118825.1 Protein Homology CDS 1517420 1517554 . - 0 ID=cds-WHI78651.1;Parent=gene-PYH62_07530;Dbxref=NCBI_GP:WHI78651.1;Name=WHI78651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488705.1;locus_tag=PYH62_07530;product=beta-class phenol-soluble modulin;protein_id=WHI78651.1;transl_table=11 CP118825.1 Genbank gene 1517595 1517729 . - . ID=gene-PYH62_07535;Name=PYH62_07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07535 CP118825.1 Protein Homology CDS 1517595 1517729 . - 0 ID=cds-WHI78652.1;Parent=gene-PYH62_07535;Dbxref=NCBI_GP:WHI78652.1;Name=WHI78652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499677.1;locus_tag=PYH62_07535;product=beta-class phenol-soluble modulin;protein_id=WHI78652.1;transl_table=11 CP118825.1 Genbank gene 1518162 1518917 . + . ID=gene-PYH62_07540;Name=PYH62_07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07540 CP118825.1 Protein Homology CDS 1518162 1518917 . + 0 ID=cds-WHI78653.1;Parent=gene-PYH62_07540;Dbxref=NCBI_GP:WHI78653.1;Name=WHI78653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835727.1;locus_tag=PYH62_07540;product=hypothetical protein;protein_id=WHI78653.1;transl_table=11 CP118825.1 Genbank gene 1519000 1519073 . - . ID=gene-PYH62_07545;Name=PYH62_07545;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_07545 CP118825.1 tRNAscan-SE tRNA 1519000 1519073 . - . ID=rna-PYH62_07545;Parent=gene-PYH62_07545;anticodon=(pos:complement(1519037..1519039));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_07545;product=tRNA-Arg CP118825.1 tRNAscan-SE exon 1519000 1519073 . - . ID=exon-PYH62_07545-1;Parent=rna-PYH62_07545;anticodon=(pos:complement(1519037..1519039));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_07545;product=tRNA-Arg CP118825.1 Genbank gene 1519297 1519809 . - . ID=gene-PYH62_07550;Name=PYH62_07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07550 CP118825.1 Protein Homology CDS 1519297 1519809 . - 0 ID=cds-WHI78654.1;Parent=gene-PYH62_07550;Dbxref=NCBI_GP:WHI78654.1;Name=WHI78654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455469.1;locus_tag=PYH62_07550;product=metallophosphoesterase;protein_id=WHI78654.1;transl_table=11 CP118825.1 Genbank gene 1519809 1520390 . - . ID=gene-PYH62_07555;Name=PYH62_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07555 CP118825.1 Protein Homology CDS 1519809 1520390 . - 0 ID=cds-WHI78655.1;Parent=gene-PYH62_07555;Dbxref=NCBI_GP:WHI78655.1;Name=WHI78655.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835740.1;locus_tag=PYH62_07555;product=XTP/dITP diphosphatase;protein_id=WHI78655.1;transl_table=11 CP118825.1 Genbank pseudogene 1520421 1521219 . - . ID=gene-PYH62_07560;Name=racE;gbkey=Gene;gene=racE;gene_biotype=pseudogene;locus_tag=PYH62_07560;pseudo=true CP118825.1 Protein Homology CDS 1520421 1521219 . - 0 ID=cds-PYH62_07560;Parent=gene-PYH62_07560;Note=frameshifted;Ontology_term=GO:0006807,GO:0008881;gbkey=CDS;gene=racE;go_function=glutamate racemase activity|0008881||IEA;go_process=nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450014.1;locus_tag=PYH62_07560;product=glutamate racemase;pseudo=true;transl_table=11 CP118825.1 Genbank pseudogene 1521395 1522254 . - . ID=gene-PYH62_07565;Name=sdhB;gbkey=Gene;gene=sdhB;gene_biotype=pseudogene;locus_tag=PYH62_07565;pseudo=true CP118825.1 Protein Homology CDS 1521395 1522254 . - 0 ID=cds-PYH62_07565;Parent=gene-PYH62_07565;Note=frameshifted;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;gene=sdhB;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830165.1;locus_tag=PYH62_07565;product=succinate dehydrogenase iron-sulfur subunit;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1522254 1524020 . - . ID=gene-PYH62_07570;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=PYH62_07570 CP118825.1 Protein Homology CDS 1522254 1524020 . - 0 ID=cds-WHI78656.1;Parent=gene-PYH62_07570;Dbxref=NCBI_GP:WHI78656.1;Name=WHI78656.1;gbkey=CDS;gene=sdhA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835741.1;locus_tag=PYH62_07570;product=succinate dehydrogenase flavoprotein subunit;protein_id=WHI78656.1;transl_table=11 CP118825.1 Genbank gene 1524101 1524715 . - . ID=gene-PYH62_07575;Name=PYH62_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07575 CP118825.1 Protein Homology CDS 1524101 1524715 . - 0 ID=cds-WHI78657.1;Parent=gene-PYH62_07575;Dbxref=NCBI_GP:WHI78657.1;Name=WHI78657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449979.1;locus_tag=PYH62_07575;product=succinate dehydrogenase cytochrome b558 subunit;protein_id=WHI78657.1;transl_table=11 CP118825.1 Genbank gene 1525137 1526921 . - . ID=gene-PYH62_07580;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=PYH62_07580 CP118825.1 Protein Homology CDS 1525137 1526921 . - 0 ID=cds-WHI78658.1;Parent=gene-PYH62_07580;Dbxref=NCBI_GP:WHI78658.1;Name=WHI78658.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455471.1;locus_tag=PYH62_07580;product=excinuclease ABC subunit UvrC;protein_id=WHI78658.1;transl_table=11 CP118825.1 Genbank gene 1527018 1527332 . - . ID=gene-PYH62_07585;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=PYH62_07585 CP118825.1 Protein Homology CDS 1527018 1527332 . - 0 ID=cds-WHI78659.1;Parent=gene-PYH62_07585;Dbxref=NCBI_GP:WHI78659.1;Name=WHI78659.1;Ontology_term=GO:0015036,GO:0005737;gbkey=CDS;gene=trxA;go_component=cytoplasm|0005737||IEA;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499644.1;locus_tag=PYH62_07585;product=thioredoxin;protein_id=WHI78659.1;transl_table=11 CP118825.1 Genbank gene 1527513 1529864 . - . ID=gene-PYH62_07590;Name=PYH62_07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07590 CP118825.1 Protein Homology CDS 1527513 1529864 . - 0 ID=cds-WHI78660.1;Parent=gene-PYH62_07590;Dbxref=NCBI_GP:WHI78660.1;Name=WHI78660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499643.1;locus_tag=PYH62_07590;product=endonuclease MutS2;protein_id=WHI78660.1;transl_table=11 CP118825.1 Genbank pseudogene 1529874 1531587 . - . ID=gene-PYH62_07595;Name=polX;gbkey=Gene;gene=polX;gene_biotype=pseudogene;locus_tag=PYH62_07595;pseudo=true CP118825.1 Protein Homology CDS 1529874 1531587 . - 0 ID=cds-PYH62_07595;Parent=gene-PYH62_07595;Note=frameshifted;Ontology_term=GO:0006281,GO:0003677,GO:0003887;gbkey=CDS;gene=polX;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499642.1;locus_tag=PYH62_07595;product=DNA polymerase/3'-5' exonuclease PolX;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1531661 1532182 . - . ID=gene-PYH62_07600;Name=PYH62_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07600 CP118825.1 Protein Homology CDS 1531661 1532182 . - 0 ID=cds-WHI78661.1;Parent=gene-PYH62_07600;Dbxref=NCBI_GP:WHI78661.1;Name=WHI78661.1;Ontology_term=GO:0009403,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=toxin biosynthetic process|0009403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450012.1;locus_tag=PYH62_07600;product=CvpA family protein;protein_id=WHI78661.1;transl_table=11 CP118825.1 Genbank gene 1532183 1532449 . - . ID=gene-PYH62_07605;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=PYH62_07605 CP118825.1 Protein Homology CDS 1532183 1532449 . - 0 ID=cds-WHI78662.1;Parent=gene-PYH62_07605;Dbxref=NCBI_GP:WHI78662.1;Name=WHI78662.1;Ontology_term=GO:0051301;gbkey=CDS;gene=zapA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449984.1;locus_tag=PYH62_07605;product=cell division protein ZapA;protein_id=WHI78662.1;transl_table=11 CP118825.1 Genbank gene 1532663 1533589 . + . ID=gene-PYH62_07610;Name=rnhC;gbkey=Gene;gene=rnhC;gene_biotype=protein_coding;locus_tag=PYH62_07610 CP118825.1 Protein Homology CDS 1532663 1533589 . + 0 ID=cds-WHI78663.1;Parent=gene-PYH62_07610;Dbxref=NCBI_GP:WHI78663.1;Name=WHI78663.1;Ontology_term=GO:0006401,GO:0004523,GO:0005737;gbkey=CDS;gene=rnhC;go_component=cytoplasm|0005737||IEA;go_function=RNA-DNA hybrid ribonuclease activity|0004523||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488686.1;locus_tag=PYH62_07610;product=ribonuclease HIII;protein_id=WHI78663.1;transl_table=11 CP118825.1 Genbank pseudogene 1534028 1536431 . - . ID=gene-PYH62_07615;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=pseudogene;locus_tag=PYH62_07615;pseudo=true CP118825.1 Protein Homology CDS 1534028 1536431 . - 0 ID=cds-PYH62_07615;Parent=gene-PYH62_07615;Note=frameshifted;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheT;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276099.1;locus_tag=PYH62_07615;product=phenylalanine--tRNA ligase subunit beta;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1536431 1537489 . - . ID=gene-PYH62_07620;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=PYH62_07620 CP118825.1 Protein Homology CDS 1536431 1537489 . - 0 ID=cds-WHI78664.1;Parent=gene-PYH62_07620;Dbxref=NCBI_GP:WHI78664.1;Name=WHI78664.1;Ontology_term=GO:0006432,GO:0004826,GO:0009328;gbkey=CDS;gene=pheS;go_component=phenylalanine-tRNA ligase complex|0009328||IEA;go_function=phenylalanine-tRNA ligase activity|0004826||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450654.1;locus_tag=PYH62_07620;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WHI78664.1;transl_table=11 CP118825.1 Genbank gene 1537841 1538581 . - . ID=gene-PYH62_07625;Name=PYH62_07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07625 CP118825.1 Protein Homology CDS 1537841 1538581 . - 0 ID=cds-WHI78665.1;Parent=gene-PYH62_07625;Dbxref=NCBI_GP:WHI78665.1;Name=WHI78665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499636.1;locus_tag=PYH62_07625;product=RNA methyltransferase;protein_id=WHI78665.1;transl_table=11 CP118825.1 Genbank gene 1538697 1538870 . - . ID=gene-PYH62_07630;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=PYH62_07630 CP118825.1 Protein Homology CDS 1538697 1538870 . - 0 ID=cds-WHI78666.1;Parent=gene-PYH62_07630;Dbxref=NCBI_GP:WHI78666.1;Name=WHI78666.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmF;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469283.1;locus_tag=PYH62_07630;product=50S ribosomal protein L32;protein_id=WHI78666.1;transl_table=11 CP118825.1 Genbank gene 1538955 1539509 . - . ID=gene-PYH62_07635;Name=PYH62_07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07635 CP118825.1 Protein Homology CDS 1538955 1539509 . - 0 ID=cds-WHI78667.1;Parent=gene-PYH62_07635;Dbxref=NCBI_GP:WHI78667.1;Name=WHI78667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455478.1;locus_tag=PYH62_07635;product=DUF177 domain-containing protein;protein_id=WHI78667.1;transl_table=11 CP118825.1 Genbank gene 1539636 1540775 . + . ID=gene-PYH62_07640;Name=PYH62_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07640 CP118825.1 Protein Homology CDS 1539636 1540775 . + 0 ID=cds-WHI78668.1;Parent=gene-PYH62_07640;Dbxref=NCBI_GP:WHI78668.1;Name=WHI78668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450013.1;locus_tag=PYH62_07640;product=nucleotidyltransferase;protein_id=WHI78668.1;transl_table=11 CP118825.1 Genbank gene 1540822 1541307 . - . ID=gene-PYH62_07645;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=PYH62_07645 CP118825.1 Protein Homology CDS 1540822 1541307 . - 0 ID=cds-WHI78669.1;Parent=gene-PYH62_07645;Dbxref=NCBI_GP:WHI78669.1;Name=WHI78669.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450001.1;locus_tag=PYH62_07645;product=pantetheine-phosphate adenylyltransferase;protein_id=WHI78669.1;transl_table=11 CP118825.1 Genbank gene 1541300 1541851 . - . ID=gene-PYH62_07650;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=PYH62_07650 CP118825.1 Protein Homology CDS 1541300 1541851 . - 0 ID=cds-WHI78670.1;Parent=gene-PYH62_07650;Dbxref=NCBI_GP:WHI78670.1;Name=WHI78670.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450015.1;locus_tag=PYH62_07650;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WHI78670.1;transl_table=11 CP118825.1 Genbank gene 1541922 1542311 . + . ID=gene-PYH62_07655;Name=PYH62_07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07655 CP118825.1 Protein Homology CDS 1541922 1542311 . + 0 ID=cds-WHI78671.1;Parent=gene-PYH62_07655;Dbxref=NCBI_GP:WHI78671.1;Name=WHI78671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457429.1;locus_tag=PYH62_07655;product=hypothetical protein;protein_id=WHI78671.1;transl_table=11 CP118825.1 Genbank gene 1542329 1542580 . - . ID=gene-PYH62_07660;Name=PYH62_07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07660 CP118825.1 Protein Homology CDS 1542329 1542580 . - 0 ID=cds-WHI78672.1;Parent=gene-PYH62_07660;Dbxref=NCBI_GP:WHI78672.1;Name=WHI78672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002435298.1;locus_tag=PYH62_07660;product=DUF2129 domain-containing protein;protein_id=WHI78672.1;transl_table=11 CP118825.1 Genbank gene 1542725 1543660 . + . ID=gene-PYH62_07665;Name=PYH62_07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07665 CP118825.1 Protein Homology CDS 1542725 1543660 . + 0 ID=cds-WHI78673.1;Parent=gene-PYH62_07665;Dbxref=NCBI_GP:WHI78673.1;Name=WHI78673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455482.1;locus_tag=PYH62_07665;product=glycerophosphodiester phosphodiesterase;protein_id=WHI78673.1;transl_table=11 CP118825.1 Genbank gene 1543828 1544262 . - . ID=gene-PYH62_07670;Name=PYH62_07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07670 CP118825.1 Protein Homology CDS 1543828 1544262 . - 0 ID=cds-WHI78674.1;Parent=gene-PYH62_07670;Dbxref=NCBI_GP:WHI78674.1;Name=WHI78674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830091.1;locus_tag=PYH62_07670;product=YlbF family regulator;protein_id=WHI78674.1;transl_table=11 CP118825.1 Genbank gene 1544281 1545342 . - . ID=gene-PYH62_07675;Name=PYH62_07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07675 CP118825.1 Protein Homology CDS 1544281 1545342 . - 0 ID=cds-WHI78675.1;Parent=gene-PYH62_07675;Dbxref=NCBI_GP:WHI78675.1;Name=WHI78675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001564845.1;locus_tag=PYH62_07675;product=CAP-associated domain-containing protein;protein_id=WHI78675.1;transl_table=11 CP118825.1 Genbank gene 1545588 1546049 . - . ID=gene-PYH62_07680;Name=PYH62_07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07680 CP118825.1 Protein Homology CDS 1545588 1546049 . - 0 ID=cds-WHI78676.1;Parent=gene-PYH62_07680;Dbxref=NCBI_GP:WHI78676.1;Name=WHI78676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457433.1;locus_tag=PYH62_07680;product=DUF420 domain-containing protein;protein_id=WHI78676.1;transl_table=11 CP118825.1 Genbank gene 1546079 1546990 . - . ID=gene-PYH62_07685;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=PYH62_07685 CP118825.1 Protein Homology CDS 1546079 1546990 . - 0 ID=cds-WHI78677.1;Parent=gene-PYH62_07685;Dbxref=NCBI_GP:WHI78677.1;Name=WHI78677.1;Ontology_term=GO:0006783,GO:0008495;gbkey=CDS;gene=cyoE;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499612.1;locus_tag=PYH62_07685;product=heme o synthase;protein_id=WHI78677.1;transl_table=11 CP118825.1 Genbank gene 1547229 1548149 . + . ID=gene-PYH62_07690;Name=PYH62_07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07690 CP118825.1 Protein Homology CDS 1547229 1548149 . + 0 ID=cds-WHI78678.1;Parent=gene-PYH62_07690;Dbxref=NCBI_GP:WHI78678.1;Name=WHI78678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488704.1;locus_tag=PYH62_07690;product=heme A synthase;protein_id=WHI78678.1;transl_table=11 CP118825.1 Genbank gene 1548273 1551722 . - . ID=gene-PYH62_07695;Name=PYH62_07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07695 CP118825.1 Protein Homology CDS 1548273 1551722 . - 0 ID=cds-WHI78679.1;Parent=gene-PYH62_07695;Dbxref=NCBI_GP:WHI78679.1;Name=WHI78679.1;Ontology_term=GO:0006090,GO:0006094,GO:0004736,GO:0005524,GO:0009374,GO:0046872;gbkey=CDS;go_function=pyruvate carboxylase activity|0004736||IEA,ATP binding|0005524||IEA,biotin binding|0009374||IEA,metal ion binding|0046872||IEA;go_process=pyruvate metabolic process|0006090||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450003.1;locus_tag=PYH62_07695;product=pyruvate carboxylase;protein_id=WHI78679.1;transl_table=11 CP118825.1 Genbank gene 1552058 1553290 . - . ID=gene-PYH62_07700;Name=PYH62_07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07700 CP118825.1 Protein Homology CDS 1552058 1553290 . - 0 ID=cds-WHI78680.1;Parent=gene-PYH62_07700;Dbxref=NCBI_GP:WHI78680.1;Name=WHI78680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835753.1;locus_tag=PYH62_07700;product=FtsW/RodA/SpoVE family cell cycle protein;protein_id=WHI78680.1;transl_table=11 CP118825.1 Genbank gene 1553535 1553810 . - . ID=gene-PYH62_07705;Name=PYH62_07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07705 CP118825.1 Protein Homology CDS 1553535 1553810 . - 0 ID=cds-WHI78681.1;Parent=gene-PYH62_07705;Dbxref=NCBI_GP:WHI78681.1;Name=WHI78681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499608.1;locus_tag=PYH62_07705;product=YlaN family protein;protein_id=WHI78681.1;transl_table=11 CP118825.1 Genbank gene 1553948 1554433 . + . ID=gene-PYH62_07710;Name=PYH62_07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07710 CP118825.1 Protein Homology CDS 1553948 1554433 . + 0 ID=cds-WHI78682.1;Parent=gene-PYH62_07710;Dbxref=NCBI_GP:WHI78682.1;Name=WHI78682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499607.1;locus_tag=PYH62_07710;product=hypothetical protein;protein_id=WHI78682.1;transl_table=11 CP118825.1 Genbank gene 1554435 1554629 . + . ID=gene-PYH62_07715;Name=PYH62_07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07715 CP118825.1 Protein Homology CDS 1554435 1554629 . + 0 ID=cds-WHI78683.1;Parent=gene-PYH62_07715;Dbxref=NCBI_GP:WHI78683.1;Name=WHI78683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439348.1;locus_tag=PYH62_07715;product=DUF2197 domain-containing protein;protein_id=WHI78683.1;transl_table=11 CP118825.1 Genbank gene 1554691 1556535 . - . ID=gene-PYH62_07720;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=PYH62_07720 CP118825.1 Protein Homology CDS 1554691 1556535 . - 0 ID=cds-WHI78684.1;Parent=gene-PYH62_07720;Dbxref=NCBI_GP:WHI78684.1;Name=WHI78684.1;Ontology_term=GO:0006412,GO:0006950,GO:0005525;gbkey=CDS;gene=typA;go_function=GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448035.1;locus_tag=PYH62_07720;product=translational GTPase TypA;protein_id=WHI78684.1;transl_table=11 CP118825.1 Genbank gene 1556634 1556825 . + . ID=gene-PYH62_07725;Name=PYH62_07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07725 CP118825.1 Protein Homology CDS 1556634 1556825 . + 0 ID=cds-WHI78685.1;Parent=gene-PYH62_07725;Dbxref=NCBI_GP:WHI78685.1;Name=WHI78685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446184.1;locus_tag=PYH62_07725;product=DUF5325 family protein;protein_id=WHI78685.1;transl_table=11 CP118825.1 Genbank gene 1556894 1557709 . - . ID=gene-PYH62_07730;Name=PYH62_07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07730 CP118825.1 Protein Homology CDS 1556894 1557709 . - 0 ID=cds-WHI78686.1;Parent=gene-PYH62_07730;Dbxref=NCBI_GP:WHI78686.1;Name=WHI78686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448077.1;locus_tag=PYH62_07730;product=inositol monophosphatase family protein;protein_id=WHI78686.1;transl_table=11 CP118825.1 Genbank gene 1557949 1558164 . - . ID=gene-PYH62_07735;Name=PYH62_07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07735 CP118825.1 Protein Homology CDS 1557949 1558164 . - 0 ID=cds-WHI78687.1;Parent=gene-PYH62_07735;Dbxref=NCBI_GP:WHI78687.1;Name=WHI78687.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448140.1;locus_tag=PYH62_07735;product=GNAT family N-acetyltransferase;protein_id=WHI78687.1;transl_table=11 CP118825.1 Genbank gene 1558558 1559169 . + . ID=gene-PYH62_07740;Name=PYH62_07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07740 CP118825.1 Protein Homology CDS 1558558 1559169 . + 0 ID=cds-WHI78688.1;Parent=gene-PYH62_07740;Dbxref=NCBI_GP:WHI78688.1;Name=WHI78688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831689.1;locus_tag=PYH62_07740;product=DUF1054 domain-containing protein;protein_id=WHI78688.1;transl_table=11 CP118825.1 Genbank pseudogene 1559358 1560696 . + . ID=gene-PYH62_07745;Name=PYH62_07745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_07745;pseudo=true CP118825.1 Protein Homology CDS 1559358 1560696 . + 0 ID=cds-PYH62_07745;Parent=gene-PYH62_07745;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499601.1;locus_tag=PYH62_07745;product=Nramp family divalent metal transporter;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1561057 1562178 . - . ID=gene-PYH62_07750;Name=PYH62_07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07750 CP118825.1 Protein Homology CDS 1561057 1562178 . - 0 ID=cds-WHI78689.1;Parent=gene-PYH62_07750;Dbxref=NCBI_GP:WHI78689.1;Name=WHI78689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455491.1;locus_tag=PYH62_07750;product=DUF4064 domain-containing protein;protein_id=WHI78689.1;transl_table=11 CP118825.1 Genbank gene 1562251 1563324 . - . ID=gene-PYH62_07755;Name=PYH62_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07755 CP118825.1 Protein Homology CDS 1562251 1563324 . - 0 ID=cds-WHI78690.1;Parent=gene-PYH62_07755;Dbxref=NCBI_GP:WHI78690.1;Name=WHI78690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499598.1;locus_tag=PYH62_07755;product=ABC transporter substrate-binding protein;protein_id=WHI78690.1;transl_table=11 CP118825.1 Genbank gene 1563321 1564130 . - . ID=gene-PYH62_07760;Name=PYH62_07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07760 CP118825.1 Protein Homology CDS 1563321 1564130 . - 0 ID=cds-WHI78691.1;Parent=gene-PYH62_07760;Dbxref=NCBI_GP:WHI78691.1;Name=WHI78691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455493.1;locus_tag=PYH62_07760;product=ABC transporter permease;protein_id=WHI78691.1;transl_table=11 CP118825.1 Genbank gene 1564136 1564939 . - . ID=gene-PYH62_07765;Name=PYH62_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07765 CP118825.1 Protein Homology CDS 1564136 1564939 . - 0 ID=cds-WHI78692.1;Parent=gene-PYH62_07765;Dbxref=NCBI_GP:WHI78692.1;Name=WHI78692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499596.1;locus_tag=PYH62_07765;product=ABC transporter permease;protein_id=WHI78692.1;transl_table=11 CP118825.1 Genbank gene 1564932 1566026 . - . ID=gene-PYH62_07770;Name=PYH62_07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07770 CP118825.1 Protein Homology CDS 1564932 1566026 . - 0 ID=cds-WHI78693.1;Parent=gene-PYH62_07770;Dbxref=NCBI_GP:WHI78693.1;Name=WHI78693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499595.1;locus_tag=PYH62_07770;product=ABC transporter ATP-binding protein;protein_id=WHI78693.1;transl_table=11 CP118825.1 Genbank gene 1566040 1566579 . - . ID=gene-PYH62_07775;Name=PYH62_07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07775 CP118825.1 Protein Homology CDS 1566040 1566579 . - 0 ID=cds-WHI78694.1;Parent=gene-PYH62_07775;Dbxref=NCBI_GP:WHI78694.1;Name=WHI78694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499594.1;locus_tag=PYH62_07775;product=XRE family transcriptional regulator;protein_id=WHI78694.1;transl_table=11 CP118825.1 Genbank gene 1566710 1566982 . - . ID=gene-PYH62_07780;Name=PYH62_07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07780 CP118825.1 Protein Homology CDS 1566710 1566982 . - 0 ID=cds-WHI78695.1;Parent=gene-PYH62_07780;Dbxref=NCBI_GP:WHI78695.1;Name=WHI78695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455495.1;locus_tag=PYH62_07780;product=UPF0223 family protein;protein_id=WHI78695.1;transl_table=11 CP118825.1 Genbank gene 1567127 1568533 . - . ID=gene-PYH62_07785;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=PYH62_07785 CP118825.1 Protein Homology CDS 1567127 1568533 . - 0 ID=cds-WHI78696.1;Parent=gene-PYH62_07785;Dbxref=NCBI_GP:WHI78696.1;Name=WHI78696.1;Ontology_term=GO:0006096,GO:0045454,GO:0051068,GO:0004148;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA;go_process=glycolytic process|0006096||IEA,cell redox homeostasis|0045454||IEA,dihydrolipoamide metabolic process|0051068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383646.1;locus_tag=PYH62_07785;product=dihydrolipoyl dehydrogenase;protein_id=WHI78696.1;transl_table=11 CP118825.1 Genbank gene 1568537 1569841 . - . ID=gene-PYH62_07790;Name=PYH62_07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07790 CP118825.1 Protein Homology CDS 1568537 1569841 . - 0 ID=cds-WHI78697.1;Parent=gene-PYH62_07790;Dbxref=NCBI_GP:WHI78697.1;Name=WHI78697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499591.1;locus_tag=PYH62_07790;product=dihydrolipoamide acetyltransferase family protein;protein_id=WHI78697.1;transl_table=11 CP118825.1 Genbank pseudogene 1570063 1571041 . - . ID=gene-PYH62_07795;Name=PYH62_07795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_07795;pseudo=true CP118825.1 Protein Homology CDS 1570063 1571041 . - 0 ID=cds-PYH62_07795;Parent=gene-PYH62_07795;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637695.1;locus_tag=PYH62_07795;product=alpha-ketoacid dehydrogenase subunit beta;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1571045 1572157 . - . ID=gene-PYH62_07800;Name=pdhA;gbkey=Gene;gene=pdhA;gene_biotype=protein_coding;locus_tag=PYH62_07800 CP118825.1 Protein Homology CDS 1571045 1572157 . - 0 ID=cds-WHI78698.1;Parent=gene-PYH62_07800;Dbxref=NCBI_GP:WHI78698.1;Name=WHI78698.1;Ontology_term=GO:0006086,GO:0004739,GO:0045250;gbkey=CDS;gene=pdhA;go_component=cytosolic pyruvate dehydrogenase complex|0045250||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002467471.1;locus_tag=PYH62_07800;product=pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha;protein_id=WHI78698.1;transl_table=11 CP118825.1 Genbank gene 1572324 1572953 . - . ID=gene-PYH62_07805;Name=PYH62_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07805 CP118825.1 Protein Homology CDS 1572324 1572953 . - 0 ID=cds-WHI78699.1;Parent=gene-PYH62_07805;Dbxref=NCBI_GP:WHI78699.1;Name=WHI78699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448147.1;locus_tag=PYH62_07805;product=YkyA family protein;protein_id=WHI78699.1;transl_table=11 CP118825.1 Genbank gene 1573088 1573639 . + . ID=gene-PYH62_07810;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=PYH62_07810 CP118825.1 Protein Homology CDS 1573088 1573639 . + 0 ID=cds-WHI78700.1;Parent=gene-PYH62_07810;Dbxref=NCBI_GP:WHI78700.1;Name=WHI78700.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499587.1;locus_tag=PYH62_07810;product=peptide deformylase;protein_id=WHI78700.1;transl_table=11 CP118825.1 Genbank gene 1573995 1574213 . + . ID=gene-PYH62_07815;Name=PYH62_07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07815 CP118825.1 Protein Homology CDS 1573995 1574213 . + 0 ID=cds-WHI78701.1;Parent=gene-PYH62_07815;Dbxref=NCBI_GP:WHI78701.1;Name=WHI78701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499585.1;locus_tag=PYH62_07815;product=DNA-dependent RNA polymerase subunit epsilon;protein_id=WHI78701.1;transl_table=11 CP118825.1 Genbank gene 1574213 1575892 . + . ID=gene-PYH62_07820;Name=PYH62_07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07820 CP118825.1 Protein Homology CDS 1574213 1575892 . + 0 ID=cds-WHI78702.1;Parent=gene-PYH62_07820;Dbxref=NCBI_GP:WHI78702.1;Name=WHI78702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276138.1;locus_tag=PYH62_07820;product=ribonuclease J;protein_id=WHI78702.1;transl_table=11 CP118825.1 Genbank pseudogene 1575931 1576591 . - . ID=gene-PYH62_07825;Name=PYH62_07825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_07825;pseudo=true CP118825.1 Protein Homology CDS 1575931 1576591 . - 0 ID=cds-PYH62_07825;Parent=gene-PYH62_07825;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500455.1;locus_tag=PYH62_07825;product=TrkA family potassium uptake protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1576715 1577731 . - . ID=gene-PYH62_07830;Name=PYH62_07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07830 CP118825.1 Protein Homology CDS 1576715 1577731 . - 0 ID=cds-WHI78703.1;Parent=gene-PYH62_07830;Dbxref=NCBI_GP:WHI78703.1;Name=WHI78703.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442138.1;locus_tag=PYH62_07830;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WHI78703.1;transl_table=11 CP118825.1 Genbank gene 1577783 1579078 . - . ID=gene-PYH62_07835;Name=PYH62_07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07835 CP118825.1 Protein Homology CDS 1577783 1579078 . - 0 ID=cds-WHI78704.1;Parent=gene-PYH62_07835;Dbxref=NCBI_GP:WHI78704.1;Name=WHI78704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499872.1;locus_tag=PYH62_07835;product=cytochrome ubiquinol oxidase subunit I;protein_id=WHI78704.1;transl_table=11 CP118825.1 Genbank gene 1579274 1579507 . + . ID=gene-PYH62_07840;Name=PYH62_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07840 CP118825.1 Protein Homology CDS 1579274 1579507 . + 0 ID=cds-WHI78705.1;Parent=gene-PYH62_07840;Dbxref=NCBI_GP:WHI78705.1;Name=WHI78705.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448107.1;locus_tag=PYH62_07840;product=glutaredoxin domain-containing protein;protein_id=WHI78705.1;transl_table=11 CP118825.1 Genbank gene 1579559 1581274 . - . ID=gene-PYH62_07845;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=PYH62_07845 CP118825.1 Protein Homology CDS 1579559 1581274 . - 0 ID=cds-WHI78706.1;Parent=gene-PYH62_07845;Dbxref=NCBI_GP:WHI78706.1;Name=WHI78706.1;Ontology_term=GO:0006808,GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=regulation of nitrogen utilization|0006808||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499578.1;locus_tag=PYH62_07845;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WHI78706.1;transl_table=11 CP118825.1 Genbank gene 1581277 1581543 . - . ID=gene-PYH62_07850;Name=PYH62_07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07850 CP118825.1 Protein Homology CDS 1581277 1581543 . - 0 ID=cds-WHI78707.1;Parent=gene-PYH62_07850;Dbxref=NCBI_GP:WHI78707.1;Name=WHI78707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499577.1;locus_tag=PYH62_07850;product=phosphocarrier protein HPr;protein_id=WHI78707.1;transl_table=11 CP118825.1 Genbank gene 1581816 1582358 . - . ID=gene-PYH62_07855;Name=PYH62_07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07855 CP118825.1 Protein Homology CDS 1581816 1582358 . - 0 ID=cds-WHI78708.1;Parent=gene-PYH62_07855;Dbxref=NCBI_GP:WHI78708.1;Name=WHI78708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000505962.1;locus_tag=PYH62_07855;product=DUF697 domain-containing protein;protein_id=WHI78708.1;transl_table=11 CP118825.1 Genbank gene 1582424 1583596 . - . ID=gene-PYH62_07860;Name=PYH62_07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07860 CP118825.1 Protein Homology CDS 1582424 1583596 . - 0 ID=cds-WHI78709.1;Parent=gene-PYH62_07860;Dbxref=NCBI_GP:WHI78709.1;Name=WHI78709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499575.1;locus_tag=PYH62_07860;product=class I SAM-dependent rRNA methyltransferase;protein_id=WHI78709.1;transl_table=11 CP118825.1 Genbank gene 1583750 1585045 . - . ID=gene-PYH62_07865;Name=PYH62_07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07865 CP118825.1 Protein Homology CDS 1583750 1585045 . - 0 ID=cds-WHI78710.1;Parent=gene-PYH62_07865;Dbxref=NCBI_GP:WHI78710.1;Name=WHI78710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499574.1;locus_tag=PYH62_07865;product=hypothetical protein;protein_id=WHI78710.1;transl_table=11 CP118825.1 Genbank gene 1585198 1585317 . + . ID=gene-PYH62_07870;Name=graF;gbkey=Gene;gene=graF;gene_biotype=protein_coding;locus_tag=PYH62_07870 CP118825.1 Protein Homology CDS 1585198 1585317 . + 0 ID=cds-WHI78711.1;Parent=gene-PYH62_07870;Dbxref=NCBI_GP:WHI78711.1;Name=WHI78711.1;gbkey=CDS;gene=graF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464804.1;locus_tag=PYH62_07870;product=glycopeptide resistance-associated protein GraF;protein_id=WHI78711.1;transl_table=11 CP118825.1 cmsearch riboswitch 1585605 1585706 . + . ID=id-CP118825.1:1585605..1585706;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch CP118825.1 Genbank pseudogene 1585799 1586375 . + . ID=gene-PYH62_07875;Name=PYH62_07875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_07875;pseudo=true CP118825.1 Protein Homology CDS 1585799 1586375 . + 0 ID=cds-PYH62_07875;Parent=gene-PYH62_07875;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499571.1;locus_tag=PYH62_07875;product=ECF transporter S component;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1586388 1587791 . + . ID=gene-PYH62_07880;Name=PYH62_07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07880 CP118825.1 Protein Homology CDS 1586388 1587791 . + 0 ID=cds-WHI78712.1;Parent=gene-PYH62_07880;Dbxref=NCBI_GP:WHI78712.1;Name=WHI78712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831678.1;locus_tag=PYH62_07880;product=ABC transporter ATP-binding protein;protein_id=WHI78712.1;transl_table=11 CP118825.1 Genbank gene 1587784 1588593 . + . ID=gene-PYH62_07885;Name=PYH62_07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07885 CP118825.1 Protein Homology CDS 1587784 1588593 . + 0 ID=cds-WHI78713.1;Parent=gene-PYH62_07885;Dbxref=NCBI_GP:WHI78713.1;Name=WHI78713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175761.1;locus_tag=PYH62_07885;product=energy-coupling factor transporter transmembrane component T;protein_id=WHI78713.1;transl_table=11 CP118825.1 Genbank pseudogene 1588807 1589928 . + . ID=gene-PYH62_07890;Name=PYH62_07890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_07890;pseudo=true CP118825.1 Protein Homology CDS 1588807 1589928 . + 0 ID=cds-PYH62_07890;Parent=gene-PYH62_07890;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558285.1;locus_tag=PYH62_07890;product=IS3 family transposase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1590000 1591238 . - . ID=gene-PYH62_07895;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=PYH62_07895 CP118825.1 Protein Homology CDS 1590000 1591238 . - 0 ID=cds-WHI78714.1;Parent=gene-PYH62_07895;Dbxref=NCBI_GP:WHI78714.1;Name=WHI78714.1;Ontology_term=GO:0006189,GO:0009152,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448142.1;locus_tag=PYH62_07895;product=phosphoribosylamine--glycine ligase;protein_id=WHI78714.1;transl_table=11 CP118825.1 Genbank gene 1591274 1592752 . - . ID=gene-PYH62_07900;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=PYH62_07900 CP118825.1 Protein Homology CDS 1591274 1592752 . - 0 ID=cds-WHI78715.1;Parent=gene-PYH62_07900;Dbxref=NCBI_GP:WHI78715.1;Name=WHI78715.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499567.1;locus_tag=PYH62_07900;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WHI78715.1;transl_table=11 CP118825.1 Genbank gene 1592768 1593334 . - . ID=gene-PYH62_07905;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=PYH62_07905 CP118825.1 Protein Homology CDS 1592768 1593334 . - 0 ID=cds-WHI78716.1;Parent=gene-PYH62_07905;Dbxref=NCBI_GP:WHI78716.1;Name=WHI78716.1;Ontology_term=GO:0009152,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499566.1;locus_tag=PYH62_07905;product=phosphoribosylglycinamide formyltransferase;protein_id=WHI78716.1;transl_table=11 CP118825.1 Genbank gene 1593337 1594365 . - . ID=gene-PYH62_07910;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=PYH62_07910 CP118825.1 Protein Homology CDS 1593337 1594365 . - 0 ID=cds-WHI78717.1;Parent=gene-PYH62_07910;Dbxref=NCBI_GP:WHI78717.1;Name=WHI78717.1;Ontology_term=GO:0006189,GO:0009152,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175767.1;locus_tag=PYH62_07910;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WHI78717.1;transl_table=11 CP118825.1 Genbank gene 1594358 1595842 . - . ID=gene-PYH62_07915;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=PYH62_07915 CP118825.1 Protein Homology CDS 1594358 1595842 . - 0 ID=cds-WHI78718.1;Parent=gene-PYH62_07915;Dbxref=NCBI_GP:WHI78718.1;Name=WHI78718.1;Ontology_term=GO:0009152,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499564.1;locus_tag=PYH62_07915;product=amidophosphoribosyltransferase;protein_id=WHI78718.1;transl_table=11 CP118825.1 Genbank gene 1595821 1598010 . - . ID=gene-PYH62_07920;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=PYH62_07920 CP118825.1 Protein Homology CDS 1595821 1598010 . - 0 ID=cds-WHI78719.1;Parent=gene-PYH62_07920;Dbxref=NCBI_GP:WHI78719.1;Name=WHI78719.1;Ontology_term=GO:0009152,GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499563.1;locus_tag=PYH62_07920;product=phosphoribosylformylglycinamidine synthase subunit PurL;protein_id=WHI78719.1;transl_table=11 CP118825.1 Genbank gene 1598003 1598674 . - . ID=gene-PYH62_07925;Name=purQ;gbkey=Gene;gene=purQ;gene_biotype=protein_coding;locus_tag=PYH62_07925 CP118825.1 Protein Homology CDS 1598003 1598674 . - 0 ID=cds-WHI78720.1;Parent=gene-PYH62_07925;Dbxref=NCBI_GP:WHI78720.1;Name=WHI78720.1;Ontology_term=GO:0006189,GO:0004642;gbkey=CDS;gene=purQ;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499562.1;locus_tag=PYH62_07925;product=phosphoribosylformylglycinamidine synthase subunit PurQ;protein_id=WHI78720.1;transl_table=11 CP118825.1 Genbank gene 1598676 1598936 . - . ID=gene-PYH62_07930;Name=purS;gbkey=Gene;gene=purS;gene_biotype=protein_coding;locus_tag=PYH62_07930 CP118825.1 Protein Homology CDS 1598676 1598936 . - 0 ID=cds-WHI78721.1;Parent=gene-PYH62_07930;Dbxref=NCBI_GP:WHI78721.1;Name=WHI78721.1;gbkey=CDS;gene=purS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499561.1;locus_tag=PYH62_07930;product=phosphoribosylformylglycinamidine synthase subunit PurS;protein_id=WHI78721.1;transl_table=11 CP118825.1 Genbank gene 1598936 1599640 . - . ID=gene-PYH62_07935;Name=PYH62_07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07935 CP118825.1 Protein Homology CDS 1598936 1599640 . - 0 ID=cds-WHI78722.1;Parent=gene-PYH62_07935;Dbxref=NCBI_GP:WHI78722.1;Name=WHI78722.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499560.1;locus_tag=PYH62_07935;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WHI78722.1;transl_table=11 CP118825.1 Genbank gene 1599644 1600768 . - . ID=gene-PYH62_07940;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=PYH62_07940 CP118825.1 Protein Homology CDS 1599644 1600768 . - 0 ID=cds-WHI78723.1;Parent=gene-PYH62_07940;Dbxref=NCBI_GP:WHI78723.1;Name=WHI78723.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835350.1;locus_tag=PYH62_07940;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WHI78723.1;transl_table=11 CP118825.1 Genbank gene 1600755 1601237 . - . ID=gene-PYH62_07945;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=PYH62_07945 CP118825.1 Protein Homology CDS 1600755 1601237 . - 0 ID=cds-WHI78724.1;Parent=gene-PYH62_07945;Dbxref=NCBI_GP:WHI78724.1;Name=WHI78724.1;Ontology_term=GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465404.1;locus_tag=PYH62_07945;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WHI78724.1;transl_table=11 CP118825.1 Genbank gene 1601448 1602305 . + . ID=gene-PYH62_07950;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=PYH62_07950 CP118825.1 Protein Homology CDS 1601448 1602305 . + 0 ID=cds-WHI78725.1;Parent=gene-PYH62_07950;Dbxref=NCBI_GP:WHI78725.1;Name=WHI78725.1;gbkey=CDS;gene=folD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012990888.1;locus_tag=PYH62_07950;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WHI78725.1;transl_table=11 CP118825.1 Genbank gene 1602394 1603539 . - . ID=gene-PYH62_07955;Name=PYH62_07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07955 CP118825.1 Protein Homology CDS 1602394 1603539 . - 0 ID=cds-WHI78726.1;Parent=gene-PYH62_07955;Dbxref=NCBI_GP:WHI78726.1;Name=WHI78726.1;Ontology_term=GO:0020037;gbkey=CDS;go_function=heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448258.1;locus_tag=PYH62_07955;product=globin domain-containing protein;protein_id=WHI78726.1;transl_table=11 CP118825.1 Genbank gene 1603808 1604125 . + . ID=gene-PYH62_07960;Name=PYH62_07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07960 CP118825.1 Protein Homology CDS 1603808 1604125 . + 0 ID=cds-WHI78727.1;Parent=gene-PYH62_07960;Dbxref=NCBI_GP:WHI78727.1;Name=WHI78727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499556.1;locus_tag=PYH62_07960;product=DUF5011 domain-containing protein;protein_id=WHI78727.1;transl_table=11 CP118825.1 Genbank gene 1604423 1605535 . + . ID=gene-PYH62_07965;Name=qoxA;gbkey=Gene;gene=qoxA;gene_biotype=protein_coding;locus_tag=PYH62_07965 CP118825.1 Protein Homology CDS 1604423 1605535 . + 0 ID=cds-WHI78728.1;Parent=gene-PYH62_07965;Dbxref=NCBI_GP:WHI78728.1;Name=WHI78728.1;Ontology_term=GO:0015990,GO:0009055,GO:0015078,GO:0016682,GO:0016020;gbkey=CDS;gene=qoxA;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499554.1;locus_tag=PYH62_07965;product=cytochrome aa3 quinol oxidase subunit II;protein_id=WHI78728.1;transl_table=11 CP118825.1 Genbank gene 1605535 1607523 . + . ID=gene-PYH62_07970;Name=qoxB;gbkey=Gene;gene=qoxB;gene_biotype=protein_coding;locus_tag=PYH62_07970 CP118825.1 Protein Homology CDS 1605535 1607523 . + 0 ID=cds-WHI78729.1;Parent=gene-PYH62_07970;Dbxref=NCBI_GP:WHI78729.1;Name=WHI78729.1;Ontology_term=GO:0015990,GO:0004129;gbkey=CDS;gene=qoxB;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001010769.1;locus_tag=PYH62_07970;product=cytochrome aa3 quinol oxidase subunit I;protein_id=WHI78729.1;transl_table=11 CP118825.1 Genbank gene 1607513 1608118 . + . ID=gene-PYH62_07975;Name=qoxC;gbkey=Gene;gene=qoxC;gene_biotype=protein_coding;locus_tag=PYH62_07975 CP118825.1 Protein Homology CDS 1607513 1608118 . + 0 ID=cds-WHI78730.1;Parent=gene-PYH62_07975;Dbxref=NCBI_GP:WHI78730.1;Name=WHI78730.1;Ontology_term=GO:0015990,GO:0015078,GO:0016682;gbkey=CDS;gene=qoxC;go_function=proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499552.1;locus_tag=PYH62_07975;product=cytochrome aa3 quinol oxidase subunit III;protein_id=WHI78730.1;transl_table=11 CP118825.1 Genbank gene 1608115 1608405 . + . ID=gene-PYH62_07980;Name=qoxD;gbkey=Gene;gene=qoxD;gene_biotype=protein_coding;locus_tag=PYH62_07980 CP118825.1 Protein Homology CDS 1608115 1608405 . + 0 ID=cds-WHI78731.1;Parent=gene-PYH62_07980;Dbxref=NCBI_GP:WHI78731.1;Name=WHI78731.1;Ontology_term=GO:0015990,GO:0015078,GO:0016682;gbkey=CDS;gene=qoxD;go_function=proton transmembrane transporter activity|0015078||IEA,oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474577.1;locus_tag=PYH62_07980;product=cytochrome aa3 quinol oxidase subunit IV;protein_id=WHI78731.1;transl_table=11 CP118825.1 Genbank gene 1608538 1609440 . + . ID=gene-PYH62_07985;Name=rihC;gbkey=Gene;gene=rihC;gene_biotype=protein_coding;locus_tag=PYH62_07985 CP118825.1 Protein Homology CDS 1608538 1609440 . + 0 ID=cds-WHI78732.1;Parent=gene-PYH62_07985;Dbxref=NCBI_GP:WHI78732.1;Name=WHI78732.1;Ontology_term=GO:0016799;gbkey=CDS;gene=rihC;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175779.1;locus_tag=PYH62_07985;product=ribonucleoside hydrolase RihC;protein_id=WHI78732.1;transl_table=11 CP118825.1 Genbank gene 1609488 1610657 . - . ID=gene-PYH62_07990;Name=PYH62_07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07990 CP118825.1 Protein Homology CDS 1609488 1610657 . - 0 ID=cds-WHI78733.1;Parent=gene-PYH62_07990;Dbxref=NCBI_GP:WHI78733.1;Name=WHI78733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175780.1;locus_tag=PYH62_07990;product=serine hydrolase;protein_id=WHI78733.1;transl_table=11 CP118825.1 Genbank gene 1611020 1612258 . + . ID=gene-PYH62_07995;Name=PYH62_07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_07995 CP118825.1 Protein Homology CDS 1611020 1612258 . + 0 ID=cds-WHI78734.1;Parent=gene-PYH62_07995;Dbxref=NCBI_GP:WHI78734.1;Name=WHI78734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455512.1;locus_tag=PYH62_07995;product=LCP family protein;protein_id=WHI78734.1;transl_table=11 CP118825.1 Genbank gene 1612278 1612748 . + . ID=gene-PYH62_08000;Name=PYH62_08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08000 CP118825.1 Protein Homology CDS 1612278 1612748 . + 0 ID=cds-WHI78735.1;Parent=gene-PYH62_08000;Dbxref=NCBI_GP:WHI78735.1;Name=WHI78735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499548.1;locus_tag=PYH62_08000;product=DUF2538 family protein;protein_id=WHI78735.1;transl_table=11 CP118825.1 Genbank gene 1612866 1613285 . + . ID=gene-PYH62_08005;Name=PYH62_08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08005 CP118825.1 Protein Homology CDS 1612866 1613285 . + 0 ID=cds-WHI78736.1;Parent=gene-PYH62_08005;Dbxref=NCBI_GP:WHI78736.1;Name=WHI78736.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488376.1;locus_tag=PYH62_08005;product=GNAT family N-acetyltransferase;protein_id=WHI78736.1;transl_table=11 CP118825.1 Genbank gene 1613437 1617477 . + . ID=gene-PYH62_08010;Name=PYH62_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08010 CP118825.1 Protein Homology CDS 1613437 1617477 . + 0 ID=cds-WHI78737.1;Parent=gene-PYH62_08010;Dbxref=NCBI_GP:WHI78737.1;Name=WHI78737.1;Ontology_term=GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448086.1;locus_tag=PYH62_08010;product=glucosaminidase domain-containing protein;protein_id=WHI78737.1;transl_table=11 CP118825.1 Genbank gene 1617654 1618073 . - . ID=gene-PYH62_08015;Name=PYH62_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08015 CP118825.1 Protein Homology CDS 1617654 1618073 . - 0 ID=cds-WHI78738.1;Parent=gene-PYH62_08015;Dbxref=NCBI_GP:WHI78738.1;Name=WHI78738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499544.1;locus_tag=PYH62_08015;product=MarR family transcriptional regulator;protein_id=WHI78738.1;transl_table=11 CP118825.1 Genbank gene 1618342 1619517 . + . ID=gene-PYH62_08020;Name=PYH62_08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08020 CP118825.1 Protein Homology CDS 1618342 1619517 . + 0 ID=cds-WHI78739.1;Parent=gene-PYH62_08020;Dbxref=NCBI_GP:WHI78739.1;Name=WHI78739.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835348.1;locus_tag=PYH62_08020;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WHI78739.1;transl_table=11 CP118825.1 Genbank gene 1619569 1620387 . - . ID=gene-PYH62_08025;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=PYH62_08025 CP118825.1 Protein Homology CDS 1619569 1620387 . - 0 ID=cds-WHI78740.1;Parent=gene-PYH62_08025;Dbxref=NCBI_GP:WHI78740.1;Name=WHI78740.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499538.1;locus_tag=PYH62_08025;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WHI78740.1;transl_table=11 CP118825.1 Genbank gene 1620380 1621183 . - . ID=gene-PYH62_08030;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=PYH62_08030 CP118825.1 Protein Homology CDS 1620380 1621183 . - 0 ID=cds-WHI78741.1;Parent=gene-PYH62_08030;Dbxref=NCBI_GP:WHI78741.1;Name=WHI78741.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002495593.1;locus_tag=PYH62_08030;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WHI78741.1;transl_table=11 CP118825.1 Genbank gene 1621170 1622840 . - . ID=gene-PYH62_08035;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=PYH62_08035 CP118825.1 Protein Homology CDS 1621170 1622840 . - 0 ID=cds-WHI78742.1;Parent=gene-PYH62_08035;Dbxref=NCBI_GP:WHI78742.1;Name=WHI78742.1;Ontology_term=GO:0009234,GO:0070204;gbkey=CDS;gene=menD;go_function=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276189.1;locus_tag=PYH62_08035;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WHI78742.1;transl_table=11 CP118825.1 Genbank gene 1622830 1624197 . - . ID=gene-PYH62_08040;Name=PYH62_08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08040 CP118825.1 Protein Homology CDS 1622830 1624197 . - 0 ID=cds-WHI78743.1;Parent=gene-PYH62_08040;Dbxref=NCBI_GP:WHI78743.1;Name=WHI78743.1;Ontology_term=GO:0009234,GO:0008909,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isochorismate synthase activity|0008909||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002439285.1;locus_tag=PYH62_08040;product=isochorismate synthase;protein_id=WHI78743.1;transl_table=11 CP118825.1 Genbank gene 1624378 1625316 . + . ID=gene-PYH62_08045;Name=PYH62_08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08045 CP118825.1 Protein Homology CDS 1624378 1625316 . + 0 ID=cds-WHI78744.1;Parent=gene-PYH62_08045;Dbxref=NCBI_GP:WHI78744.1;Name=WHI78744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499533.1;locus_tag=PYH62_08045;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WHI78744.1;transl_table=11 CP118825.1 Genbank gene 1625367 1625918 . - . ID=gene-PYH62_08050;Name=PYH62_08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08050 CP118825.1 Protein Homology CDS 1625367 1625918 . - 0 ID=cds-WHI78745.1;Parent=gene-PYH62_08050;Dbxref=NCBI_GP:WHI78745.1;Name=WHI78745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835345.1;locus_tag=PYH62_08050;product=GNAT family N-acetyltransferase;protein_id=WHI78745.1;transl_table=11 CP118825.1 Genbank gene 1626062 1626274 . + . ID=gene-PYH62_08055;Name=PYH62_08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08055 CP118825.1 Protein Homology CDS 1626062 1626274 . + 0 ID=cds-WHI78746.1;Parent=gene-PYH62_08055;Dbxref=NCBI_GP:WHI78746.1;Name=WHI78746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448068.1;locus_tag=PYH62_08055;product=TM2 domain-containing protein;protein_id=WHI78746.1;transl_table=11 CP118825.1 Genbank gene 1626363 1626461 . + . ID=gene-PYH62_08060;Name=PYH62_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08060 CP118825.1 Protein Homology CDS 1626363 1626461 . + 0 ID=cds-WHI78747.1;Parent=gene-PYH62_08060;Dbxref=NCBI_GP:WHI78747.1;Name=WHI78747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001248714.1;locus_tag=PYH62_08060;product=SAR1012 family small protein;protein_id=WHI78747.1;transl_table=11 CP118825.1 Genbank gene 1626529 1626747 . - . ID=gene-PYH62_08065;Name=PYH62_08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08065 CP118825.1 Protein Homology CDS 1626529 1626747 . - 0 ID=cds-WHI78748.1;Parent=gene-PYH62_08065;Dbxref=NCBI_GP:WHI78748.1;Name=WHI78748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000876824.1;locus_tag=PYH62_08065;product=IDEAL domain-containing protein;protein_id=WHI78748.1;transl_table=11 CP118825.1 Genbank gene 1626955 1627539 . + . ID=gene-PYH62_08070;Name=PYH62_08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08070 CP118825.1 Protein Homology CDS 1626955 1627539 . + 0 ID=cds-WHI78749.1;Parent=gene-PYH62_08070;Dbxref=NCBI_GP:WHI78749.1;Name=WHI78749.1;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448199.1;locus_tag=PYH62_08070;product=competence protein ComK;protein_id=WHI78749.1;transl_table=11 CP118825.1 Genbank gene 1627684 1627758 . + . ID=gene-PYH62_08075;Name=PYH62_08075;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_08075 CP118825.1 tRNAscan-SE tRNA 1627684 1627758 . + . ID=rna-PYH62_08075;Parent=gene-PYH62_08075;anticodon=(pos:1627716..1627718);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_08075;product=tRNA-Asn CP118825.1 tRNAscan-SE exon 1627684 1627758 . + . ID=exon-PYH62_08075-1;Parent=rna-PYH62_08075;anticodon=(pos:1627716..1627718);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_08075;product=tRNA-Asn CP118825.1 Genbank gene 1627762 1627850 . + . ID=gene-PYH62_08080;Name=PYH62_08080;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_08080 CP118825.1 tRNAscan-SE tRNA 1627762 1627850 . + . ID=rna-PYH62_08080;Parent=gene-PYH62_08080;anticodon=(pos:1627797..1627799);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_08080;product=tRNA-Ser CP118825.1 tRNAscan-SE exon 1627762 1627850 . + . ID=exon-PYH62_08080-1;Parent=rna-PYH62_08080;anticodon=(pos:1627797..1627799);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_08080;product=tRNA-Ser CP118825.1 Genbank gene 1627941 1628930 . - . ID=gene-PYH62_08085;Name=PYH62_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08085 CP118825.1 Protein Homology CDS 1627941 1628930 . - 0 ID=cds-WHI78750.1;Parent=gene-PYH62_08085;Dbxref=NCBI_GP:WHI78750.1;Name=WHI78750.1;Ontology_term=GO:0036211,GO:0017118;gbkey=CDS;go_function=lipoyltransferase activity|0017118||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455519.1;locus_tag=PYH62_08085;product=lipoate--protein ligase;protein_id=WHI78750.1;transl_table=11 CP118825.1 Genbank gene 1629119 1629295 . + . ID=gene-PYH62_08090;Name=PYH62_08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08090 CP118825.1 Protein Homology CDS 1629119 1629295 . + 0 ID=cds-WHI78751.1;Parent=gene-PYH62_08090;Dbxref=NCBI_GP:WHI78751.1;Name=WHI78751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499517.1;locus_tag=PYH62_08090;product=DUF2187 family protein;protein_id=WHI78751.1;transl_table=11 CP118825.1 Genbank gene 1629311 1629913 . + . ID=gene-PYH62_08095;Name=PYH62_08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08095 CP118825.1 Protein Homology CDS 1629311 1629913 . + 0 ID=cds-WHI78752.1;Parent=gene-PYH62_08095;Dbxref=NCBI_GP:WHI78752.1;Name=WHI78752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002458039.1;locus_tag=PYH62_08095;product=CPBP family intramembrane metalloprotease;protein_id=WHI78752.1;transl_table=11 CP118825.1 Genbank gene 1630077 1631435 . - . ID=gene-PYH62_08100;Name=PYH62_08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08100 CP118825.1 Protein Homology CDS 1630077 1631435 . - 0 ID=cds-WHI78753.1;Parent=gene-PYH62_08100;Dbxref=NCBI_GP:WHI78753.1;Name=WHI78753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499512.1;locus_tag=PYH62_08100;product=TrkH family potassium uptake protein;protein_id=WHI78753.1;transl_table=11 CP118825.1 Genbank gene 1631454 1633313 . - . ID=gene-PYH62_08105;Name=PYH62_08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08105 CP118825.1 Protein Homology CDS 1631454 1633313 . - 0 ID=cds-WHI78754.1;Parent=gene-PYH62_08105;Dbxref=NCBI_GP:WHI78754.1;Name=WHI78754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455521.1;locus_tag=PYH62_08105;product=trypsin-like peptidase domain-containing protein;protein_id=WHI78754.1;transl_table=11 CP118825.1 Genbank gene 1633547 1634344 . - . ID=gene-PYH62_08110;Name=PYH62_08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08110 CP118825.1 Protein Homology CDS 1633547 1634344 . - 0 ID=cds-WHI78755.1;Parent=gene-PYH62_08110;Dbxref=NCBI_GP:WHI78755.1;Name=WHI78755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455522.1;locus_tag=PYH62_08110;product=TerC family protein;protein_id=WHI78755.1;transl_table=11 CP118825.1 cmsearch riboswitch 1634401 1634533 . - . ID=id-CP118825.1:1634401..1634533;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch CP118825.1 Genbank gene 1634654 1636216 . - . ID=gene-PYH62_08115;Name=PYH62_08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08115 CP118825.1 Protein Homology CDS 1634654 1636216 . - 0 ID=cds-WHI78756.1;Parent=gene-PYH62_08115;Dbxref=NCBI_GP:WHI78756.1;Name=WHI78756.1;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499509.1;locus_tag=PYH62_08115;product=peptide chain release factor 3;protein_id=WHI78756.1;transl_table=11 CP118825.1 Genbank gene 1636213 1636470 . - . ID=gene-PYH62_08120;Name=PYH62_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08120 CP118825.1 Protein Homology CDS 1636213 1636470 . - 0 ID=cds-WHI78757.1;Parent=gene-PYH62_08120;Dbxref=NCBI_GP:WHI78757.1;Name=WHI78757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175800.1;locus_tag=PYH62_08120;product=YueH family protein;protein_id=WHI78757.1;transl_table=11 CP118825.1 Genbank gene 1636460 1637944 . - . ID=gene-PYH62_08125;Name=PYH62_08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08125 CP118825.1 Protein Homology CDS 1636460 1637944 . - 0 ID=cds-WHI78758.1;Parent=gene-PYH62_08125;Dbxref=NCBI_GP:WHI78758.1;Name=WHI78758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835803.1;locus_tag=PYH62_08125;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase;protein_id=WHI78758.1;transl_table=11 CP118825.1 Genbank gene 1638325 1639503 . + . ID=gene-PYH62_08130;Name=PYH62_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08130 CP118825.1 Protein Homology CDS 1638325 1639503 . + 0 ID=cds-WHI78759.1;Parent=gene-PYH62_08130;Dbxref=NCBI_GP:WHI78759.1;Name=WHI78759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835804.1;locus_tag=PYH62_08130;product=diglucosyl diacylglycerol synthase;protein_id=WHI78759.1;transl_table=11 CP118825.1 Genbank gene 1639478 1640674 . + . ID=gene-PYH62_08135;Name=PYH62_08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08135 CP118825.1 Protein Homology CDS 1639478 1640674 . + 0 ID=cds-WHI78760.1;Parent=gene-PYH62_08135;Dbxref=NCBI_GP:WHI78760.1;Name=WHI78760.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455525.1;locus_tag=PYH62_08135;product=MFS transporter;protein_id=WHI78760.1;transl_table=11 CP118825.1 Genbank gene 1640724 1641233 . - . ID=gene-PYH62_08140;Name=PYH62_08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08140 CP118825.1 Protein Homology CDS 1640724 1641233 . - 0 ID=cds-WHI78761.1;Parent=gene-PYH62_08140;Dbxref=NCBI_GP:WHI78761.1;Name=WHI78761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276214.1;locus_tag=PYH62_08140;product=2'-5' RNA ligase family protein;protein_id=WHI78761.1;transl_table=11 CP118825.1 Genbank gene 1641356 1642099 . - . ID=gene-PYH62_08145;Name=PYH62_08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08145 CP118825.1 Protein Homology CDS 1641356 1642099 . - 0 ID=cds-WHI78762.1;Parent=gene-PYH62_08145;Dbxref=NCBI_GP:WHI78762.1;Name=WHI78762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455526.1;locus_tag=PYH62_08145;product=alpha/beta hydrolase-fold protein;protein_id=WHI78762.1;transl_table=11 CP118825.1 Genbank gene 1642370 1643455 . + . ID=gene-PYH62_08150;Name=PYH62_08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08150 CP118825.1 Protein Homology CDS 1642370 1643455 . + 0 ID=cds-WHI78763.1;Parent=gene-PYH62_08150;Dbxref=NCBI_GP:WHI78763.1;Name=WHI78763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499501.1;locus_tag=PYH62_08150;product=AI-2E family transporter;protein_id=WHI78763.1;transl_table=11 CP118825.1 Genbank gene 1643807 1644577 . - . ID=gene-PYH62_08155;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=PYH62_08155 CP118825.1 Protein Homology CDS 1643807 1644577 . - 0 ID=cds-WHI78764.1;Parent=gene-PYH62_08155;Dbxref=NCBI_GP:WHI78764.1;Name=WHI78764.1;Ontology_term=GO:0006633,GO:0004318;gbkey=CDS;gene=fabI;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499500.1;locus_tag=PYH62_08155;product=enoyl-ACP reductase FabI;protein_id=WHI78764.1;transl_table=11 CP118825.1 Genbank gene 1644783 1646627 . - . ID=gene-PYH62_08160;Name=PYH62_08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08160 CP118825.1 Protein Homology CDS 1644783 1646627 . - 0 ID=cds-WHI78765.1;Parent=gene-PYH62_08160;Dbxref=NCBI_GP:WHI78765.1;Name=WHI78765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499499.1;locus_tag=PYH62_08160;product=monovalent cation:proton antiporter family protein;protein_id=WHI78765.1;transl_table=11 CP118825.1 Genbank gene 1646637 1648022 . - . ID=gene-PYH62_08165;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=PYH62_08165 CP118825.1 Protein Homology CDS 1646637 1648022 . - 0 ID=cds-WHI78766.1;Parent=gene-PYH62_08165;Dbxref=NCBI_GP:WHI78766.1;Name=WHI78766.1;Ontology_term=GO:0015693,GO:0015095;gbkey=CDS;gene=mgtE;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448189.1;locus_tag=PYH62_08165;product=magnesium transporter;protein_id=WHI78766.1;transl_table=11 CP118825.1 Genbank gene 1648041 1648907 . - . ID=gene-PYH62_08170;Name=PYH62_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08170 CP118825.1 Protein Homology CDS 1648041 1648907 . - 0 ID=cds-WHI78767.1;Parent=gene-PYH62_08170;Dbxref=NCBI_GP:WHI78767.1;Name=WHI78767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448192.1;locus_tag=PYH62_08170;product=RluA family pseudouridine synthase;protein_id=WHI78767.1;transl_table=11 CP118825.1 Genbank pseudogene 1648907 1649714 . - . ID=gene-PYH62_08175;Name=PYH62_08175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_08175;pseudo=true CP118825.1 Protein Homology CDS 1648907 1649714 . - 0 ID=cds-PYH62_08175;Parent=gene-PYH62_08175;Note=frameshifted;Ontology_term=GO:0006741,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NADP biosynthetic process|0006741||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488363.1;locus_tag=PYH62_08175;product=NAD kinase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1649729 1650358 . - . ID=gene-PYH62_08180;Name=PYH62_08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08180 CP118825.1 Protein Homology CDS 1649729 1650358 . - 0 ID=cds-WHI78768.1;Parent=gene-PYH62_08180;Dbxref=NCBI_GP:WHI78768.1;Name=WHI78768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175811.1;locus_tag=PYH62_08180;product=GTP pyrophosphokinase family protein;protein_id=WHI78768.1;transl_table=11 CP118825.1 Genbank gene 1650375 1650722 . - . ID=gene-PYH62_08185;Name=PYH62_08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08185 CP118825.1 Protein Homology CDS 1650375 1650722 . - 0 ID=cds-WHI78769.1;Parent=gene-PYH62_08185;Dbxref=NCBI_GP:WHI78769.1;Name=WHI78769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276223.1;locus_tag=PYH62_08185;product=hypothetical protein;protein_id=WHI78769.1;transl_table=11 CP118825.1 Genbank gene 1650932 1651507 . + . ID=gene-PYH62_08190;Name=PYH62_08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08190 CP118825.1 Protein Homology CDS 1650932 1651507 . + 0 ID=cds-WHI78770.1;Parent=gene-PYH62_08190;Dbxref=NCBI_GP:WHI78770.1;Name=WHI78770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448184.1;locus_tag=PYH62_08190;product=CYTH domain-containing protein;protein_id=WHI78770.1;transl_table=11 CP118825.1 Genbank gene 1651601 1651966 . + . ID=gene-PYH62_08195;Name=PYH62_08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08195 CP118825.1 Protein Homology CDS 1651601 1651966 . + 0 ID=cds-WHI80259.1;Parent=gene-PYH62_08195;Dbxref=NCBI_GP:WHI80259.1;Name=WHI80259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012087548.1;locus_tag=PYH62_08195;product=truncated hemoglobin YjbI;protein_id=WHI80259.1;transl_table=11 CP118825.1 Genbank gene 1651990 1652787 . + . ID=gene-PYH62_08200;Name=yjbH;gbkey=Gene;gene=yjbH;gene_biotype=protein_coding;locus_tag=PYH62_08200 CP118825.1 Protein Homology CDS 1651990 1652787 . + 0 ID=cds-WHI78771.1;Parent=gene-PYH62_08200;Dbxref=NCBI_GP:WHI78771.1;Name=WHI78771.1;gbkey=CDS;gene=yjbH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175814.1;locus_tag=PYH62_08200;product=protease adaptor protein YjbH;protein_id=WHI78771.1;transl_table=11 CP118825.1 Genbank pseudogene 1653055 1654864 . - . ID=gene-PYH62_08205;Name=pepF;gbkey=Gene;gene=pepF;gene_biotype=pseudogene;locus_tag=PYH62_08205;pseudo=true CP118825.1 Protein Homology CDS 1653055 1654864 . - 0 ID=cds-PYH62_08205;Parent=gene-PYH62_08205;Note=frameshifted;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=pepF;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448233.1;locus_tag=PYH62_08205;product=oligoendopeptidase F;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1654910 1655887 . - . ID=gene-PYH62_08210;Name=PYH62_08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08210 CP118825.1 Protein Homology CDS 1654910 1655887 . - 0 ID=cds-WHI78772.1;Parent=gene-PYH62_08210;Dbxref=NCBI_GP:WHI78772.1;Name=WHI78772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448231.1;locus_tag=PYH62_08210;product=competence protein CoiA family protein;protein_id=WHI78772.1;transl_table=11 CP118825.1 Genbank gene 1656000 1656719 . - . ID=gene-PYH62_08215;Name=mecA;gbkey=Gene;gene=mecA;gene_biotype=protein_coding;locus_tag=PYH62_08215 CP118825.1 Protein Homology CDS 1656000 1656719 . - 0 ID=cds-WHI78773.1;Parent=gene-PYH62_08215;Dbxref=NCBI_GP:WHI78773.1;Name=WHI78773.1;gbkey=CDS;gene=mecA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499488.1;locus_tag=PYH62_08215;product=adaptor protein MecA;protein_id=WHI78773.1;transl_table=11 CP118825.1 Genbank gene 1656918 1657313 . - . ID=gene-PYH62_08220;Name=spxA;gbkey=Gene;gene=spxA;gene_biotype=protein_coding;locus_tag=PYH62_08220 CP118825.1 Protein Homology CDS 1656918 1657313 . - 0 ID=cds-WHI78774.1;Parent=gene-PYH62_08220;Dbxref=NCBI_GP:WHI78774.1;Name=WHI78774.1;Ontology_term=GO:0045892;gbkey=CDS;gene=spxA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499487.1;locus_tag=PYH62_08220;product=transcriptional regulator SpxA;protein_id=WHI78774.1;transl_table=11 CP118825.1 Genbank gene 1657582 1658571 . + . ID=gene-PYH62_08225;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=PYH62_08225 CP118825.1 Protein Homology CDS 1657582 1658571 . + 0 ID=cds-WHI78775.1;Parent=gene-PYH62_08225;Dbxref=NCBI_GP:WHI78775.1;Name=WHI78775.1;Ontology_term=GO:0006436,GO:0004830,GO:0005737;gbkey=CDS;gene=trpS;go_component=cytoplasm|0005737||IEA;go_function=tryptophan-tRNA ligase activity|0004830||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276231.1;locus_tag=PYH62_08225;product=tryptophan--tRNA ligase;protein_id=WHI78775.1;transl_table=11 CP118825.1 Genbank gene 1658615 1659526 . - . ID=gene-PYH62_08230;Name=PYH62_08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08230 CP118825.1 Protein Homology CDS 1658615 1659526 . - 0 ID=cds-WHI78776.1;Parent=gene-PYH62_08230;Dbxref=NCBI_GP:WHI78776.1;Name=WHI78776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175818.1;locus_tag=PYH62_08230;product=ABC transporter permease;protein_id=WHI78776.1;transl_table=11 CP118825.1 Genbank gene 1659547 1660509 . - . ID=gene-PYH62_08235;Name=PYH62_08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08235 CP118825.1 Protein Homology CDS 1659547 1660509 . - 0 ID=cds-WHI78777.1;Parent=gene-PYH62_08235;Dbxref=NCBI_GP:WHI78777.1;Name=WHI78777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499484.1;locus_tag=PYH62_08235;product=ABC transporter permease;protein_id=WHI78777.1;transl_table=11 CP118825.1 Genbank gene 1660511 1661479 . - . ID=gene-PYH62_08240;Name=PYH62_08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08240 CP118825.1 Protein Homology CDS 1660511 1661479 . - 0 ID=cds-WHI78778.1;Parent=gene-PYH62_08240;Dbxref=NCBI_GP:WHI78778.1;Name=WHI78778.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175820.1;locus_tag=PYH62_08240;product=ATP-binding cassette domain-containing protein;protein_id=WHI78778.1;transl_table=11 CP118825.1 Genbank gene 1661494 1662465 . - . ID=gene-PYH62_08245;Name=PYH62_08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08245 CP118825.1 Protein Homology CDS 1661494 1662465 . - 0 ID=cds-WHI78779.1;Parent=gene-PYH62_08245;Dbxref=NCBI_GP:WHI78779.1;Name=WHI78779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175821.1;locus_tag=PYH62_08245;product=ABC transporter ATP-binding protein;protein_id=WHI78779.1;transl_table=11 CP118825.1 Genbank gene 1662514 1664226 . - . ID=gene-PYH62_08250;Name=PYH62_08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08250 CP118825.1 Protein Homology CDS 1662514 1664226 . - 0 ID=cds-WHI78780.1;Parent=gene-PYH62_08250;Dbxref=NCBI_GP:WHI78780.1;Name=WHI78780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175822.1;locus_tag=PYH62_08250;product=ABC transporter substrate-binding protein;protein_id=WHI78780.1;transl_table=11 CP118825.1 Genbank gene 1664392 1666059 . - . ID=gene-PYH62_08255;Name=PYH62_08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08255 CP118825.1 Protein Homology CDS 1664392 1666059 . - 0 ID=cds-WHI78781.1;Parent=gene-PYH62_08255;Dbxref=NCBI_GP:WHI78781.1;Name=WHI78781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448256.1;locus_tag=PYH62_08255;product=peptide ABC transporter substrate-binding protein;protein_id=WHI78781.1;transl_table=11 CP118825.1 Genbank gene 1666087 1667037 . - . ID=gene-PYH62_08260;Name=PYH62_08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08260 CP118825.1 Protein Homology CDS 1666087 1667037 . - 0 ID=cds-WHI78782.1;Parent=gene-PYH62_08260;Dbxref=NCBI_GP:WHI78782.1;Name=WHI78782.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488384.1;locus_tag=PYH62_08260;product=ATP-binding cassette domain-containing protein;protein_id=WHI78782.1;transl_table=11 CP118825.1 Genbank gene 1667024 1668109 . - . ID=gene-PYH62_08265;Name=PYH62_08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08265 CP118825.1 Protein Homology CDS 1667024 1668109 . - 0 ID=cds-WHI78783.1;Parent=gene-PYH62_08265;Dbxref=NCBI_GP:WHI78783.1;Name=WHI78783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448182.1;locus_tag=PYH62_08265;product=ABC transporter ATP-binding protein;protein_id=WHI78783.1;transl_table=11 CP118825.1 Genbank gene 1668127 1669191 . - . ID=gene-PYH62_08270;Name=PYH62_08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08270 CP118825.1 Protein Homology CDS 1668127 1669191 . - 0 ID=cds-WHI78784.1;Parent=gene-PYH62_08270;Dbxref=NCBI_GP:WHI78784.1;Name=WHI78784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459521.1;locus_tag=PYH62_08270;product=ABC transporter permease;protein_id=WHI78784.1;transl_table=11 CP118825.1 Genbank gene 1669191 1670117 . - . ID=gene-PYH62_08275;Name=PYH62_08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08275 CP118825.1 Protein Homology CDS 1669191 1670117 . - 0 ID=cds-WHI78785.1;Parent=gene-PYH62_08275;Dbxref=NCBI_GP:WHI78785.1;Name=WHI78785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499476.1;locus_tag=PYH62_08275;product=ABC transporter permease;protein_id=WHI78785.1;transl_table=11 CP118825.1 Genbank gene 1670349 1670726 . + . ID=gene-PYH62_08280;Name=PYH62_08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08280 CP118825.1 Protein Homology CDS 1670349 1670726 . + 0 ID=cds-WHI78786.1;Parent=gene-PYH62_08280;Dbxref=NCBI_GP:WHI78786.1;Name=WHI78786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455532.1;locus_tag=PYH62_08280;product=DUF3899 domain-containing protein;protein_id=WHI78786.1;transl_table=11 CP118825.1 Genbank pseudogene 1670779 1672024 . - . ID=gene-PYH62_08285;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=pseudogene;locus_tag=PYH62_08285;pseudo=true CP118825.1 Protein Homology CDS 1670779 1672024 . - 0 ID=cds-PYH62_08285;Parent=gene-PYH62_08285;Note=frameshifted;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464399.1;locus_tag=PYH62_08285;product=beta-ketoacyl-ACP synthase II;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1672038 1672979 . - . ID=gene-PYH62_08290;Name=PYH62_08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08290 CP118825.1 Protein Homology CDS 1672038 1672979 . - 0 ID=cds-WHI78787.1;Parent=gene-PYH62_08290;Dbxref=NCBI_GP:WHI78787.1;Name=WHI78787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020369794.1;locus_tag=PYH62_08290;product=ketoacyl-ACP synthase III;protein_id=WHI78787.1;transl_table=11 CP118825.1 Genbank gene 1673205 1673405 . + . ID=gene-PYH62_08295;Name=PYH62_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08295 CP118825.1 Protein Homology CDS 1673205 1673405 . + 0 ID=cds-WHI78788.1;Parent=gene-PYH62_08295;Dbxref=NCBI_GP:WHI78788.1;Name=WHI78788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448243.1;locus_tag=PYH62_08295;product=DUF2929 family protein;protein_id=WHI78788.1;transl_table=11 CP118825.1 Genbank gene 1673507 1676116 . - . ID=gene-PYH62_08300;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=PYH62_08300 CP118825.1 Protein Homology CDS 1673507 1676116 . - 0 ID=cds-WHI78789.1;Parent=gene-PYH62_08300;Dbxref=NCBI_GP:WHI78789.1;Name=WHI78789.1;Ontology_term=GO:0006457,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016931173.1;locus_tag=PYH62_08300;product=ATP-dependent chaperone ClpB;protein_id=WHI78789.1;transl_table=11 CP118825.1 Genbank gene 1676408 1678222 . - . ID=gene-PYH62_08305;Name=PYH62_08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08305 CP118825.1 Protein Homology CDS 1676408 1678222 . - 0 ID=cds-WHI78790.1;Parent=gene-PYH62_08305;Dbxref=NCBI_GP:WHI78790.1;Name=WHI78790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455534.1;locus_tag=PYH62_08305;product=acyltransferase family protein;protein_id=WHI78790.1;transl_table=11 CP118825.1 Genbank gene 1678708 1679016 . - . ID=gene-PYH62_08310;Name=PYH62_08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08310 CP118825.1 Protein Homology CDS 1678708 1679016 . - 0 ID=cds-WHI78791.1;Parent=gene-PYH62_08310;Dbxref=NCBI_GP:WHI78791.1;Name=WHI78791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486294.1;locus_tag=PYH62_08310;product=metal-sulfur cluster assembly factor;protein_id=WHI78791.1;transl_table=11 CP118825.1 Genbank gene 1679136 1679957 . + . ID=gene-PYH62_08315;Name=PYH62_08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08315 CP118825.1 Protein Homology CDS 1679136 1679957 . + 0 ID=cds-WHI78792.1;Parent=gene-PYH62_08315;Dbxref=NCBI_GP:WHI78792.1;Name=WHI78792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448124.1;locus_tag=PYH62_08315;product=Cof-type HAD-IIB family hydrolase;protein_id=WHI78792.1;transl_table=11 CP118825.1 Genbank gene 1680040 1681362 . + . ID=gene-PYH62_08320;Name=PYH62_08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08320 CP118825.1 Protein Homology CDS 1680040 1681362 . + 0 ID=cds-WHI78793.1;Parent=gene-PYH62_08320;Dbxref=NCBI_GP:WHI78793.1;Name=WHI78793.1;Ontology_term=GO:0045454,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488331.1;locus_tag=PYH62_08320;product=CoA-disulfide reductase;protein_id=WHI78793.1;transl_table=11 CP118825.1 Genbank gene 1681403 1681804 . - . ID=gene-PYH62_08325;Name=PYH62_08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08325 CP118825.1 Protein Homology CDS 1681403 1681804 . - 0 ID=cds-WHI78794.1;Parent=gene-PYH62_08325;Dbxref=NCBI_GP:WHI78794.1;Name=WHI78794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276247.1;locus_tag=PYH62_08325;product=YisL family protein;protein_id=WHI78794.1;transl_table=11 CP118825.1 Genbank gene 1681934 1682836 . - . ID=gene-PYH62_08330;Name=PYH62_08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08330 CP118825.1 Protein Homology CDS 1681934 1682836 . - 0 ID=cds-WHI78795.1;Parent=gene-PYH62_08330;Dbxref=NCBI_GP:WHI78795.1;Name=WHI78795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499459.1;locus_tag=PYH62_08330;product=fumarylacetoacetate hydrolase family protein;protein_id=WHI78795.1;transl_table=11 CP118825.1 Genbank gene 1682963 1686628 . - . ID=gene-PYH62_08335;Name=addA;gbkey=Gene;gene=addA;gene_biotype=protein_coding;locus_tag=PYH62_08335 CP118825.1 Protein Homology CDS 1682963 1686628 . - 0 ID=cds-WHI78796.1;Parent=gene-PYH62_08335;Dbxref=NCBI_GP:WHI78796.1;Name=WHI78796.1;Ontology_term=GO:0000724,GO:0003678,GO:0016818;gbkey=CDS;gene=addA;go_function=DNA helicase activity|0003678||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276250.1;locus_tag=PYH62_08335;product=helicase-exonuclease AddAB subunit AddA;protein_id=WHI78796.1;transl_table=11 CP118825.1 Genbank gene 1686621 1690109 . - . ID=gene-PYH62_08340;Name=addB;gbkey=Gene;gene=addB;gene_biotype=protein_coding;locus_tag=PYH62_08340 CP118825.1 Protein Homology CDS 1686621 1690109 . - 0 ID=cds-WHI78797.1;Parent=gene-PYH62_08340;Dbxref=NCBI_GP:WHI78797.1;Name=WHI78797.1;Ontology_term=GO:0000724,GO:0003678;gbkey=CDS;gene=addB;go_function=DNA helicase activity|0003678||IEA;go_process=double-strand break repair via homologous recombination|0000724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175838.1;locus_tag=PYH62_08340;product=helicase-exonuclease AddAB subunit AddB;protein_id=WHI78797.1;transl_table=11 CP118825.1 Genbank gene 1690238 1690804 . - . ID=gene-PYH62_08345;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=PYH62_08345 CP118825.1 Protein Homology CDS 1690238 1690804 . - 0 ID=cds-WHI78798.1;Parent=gene-PYH62_08345;Dbxref=NCBI_GP:WHI78798.1;Name=WHI78798.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465318.1;locus_tag=PYH62_08345;product=signal peptidase I;protein_id=WHI78798.1;transl_table=11 CP118825.1 Genbank gene 1690819 1691343 . - . ID=gene-PYH62_08350;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=PYH62_08350 CP118825.1 Protein Homology CDS 1690819 1691343 . - 0 ID=cds-WHI78799.1;Parent=gene-PYH62_08350;Dbxref=NCBI_GP:WHI78799.1;Name=WHI78799.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175840.1;locus_tag=PYH62_08350;product=signal peptidase I;protein_id=WHI78799.1;transl_table=11 CP118825.1 Genbank gene 1691348 1691923 . - . ID=gene-PYH62_08355;Name=PYH62_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08355 CP118825.1 Protein Homology CDS 1691348 1691923 . - 0 ID=cds-WHI80260.1;Parent=gene-PYH62_08355;Dbxref=NCBI_GP:WHI80260.1;Name=WHI80260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498264.1;locus_tag=PYH62_08355;product=TVP38/TMEM64 family protein;protein_id=WHI80260.1;transl_table=11 CP118825.1 Genbank gene 1692292 1693623 . - . ID=gene-PYH62_08360;Name=PYH62_08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08360 CP118825.1 Protein Homology CDS 1692292 1693623 . - 0 ID=cds-WHI78800.1;Parent=gene-PYH62_08360;Dbxref=NCBI_GP:WHI78800.1;Name=WHI78800.1;Ontology_term=GO:0006096,GO:0004347;gbkey=CDS;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499453.1;locus_tag=PYH62_08360;product=glucose-6-phosphate isomerase;protein_id=WHI78800.1;transl_table=11 CP118825.1 Genbank gene 1693948 1695150 . + . ID=gene-PYH62_08365;Name=PYH62_08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08365 CP118825.1 Protein Homology CDS 1693948 1695150 . + 0 ID=cds-WHI78801.1;Parent=gene-PYH62_08365;Dbxref=NCBI_GP:WHI78801.1;Name=WHI78801.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017637420.1;locus_tag=PYH62_08365;product=argininosuccinate synthase;protein_id=WHI78801.1;transl_table=11 CP118825.1 Genbank gene 1695143 1696522 . + . ID=gene-PYH62_08370;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=PYH62_08370 CP118825.1 Protein Homology CDS 1695143 1696522 . + 0 ID=cds-WHI78802.1;Parent=gene-PYH62_08370;Dbxref=NCBI_GP:WHI78802.1;Name=WHI78802.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499451.1;locus_tag=PYH62_08370;product=argininosuccinate lyase;protein_id=WHI78802.1;transl_table=11 CP118825.1 Genbank gene 1696994 1698007 . + . ID=gene-PYH62_08375;Name=PYH62_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08375 CP118825.1 Protein Homology CDS 1696994 1698007 . + 0 ID=cds-WHI78803.1;Parent=gene-PYH62_08375;Dbxref=NCBI_GP:WHI78803.1;Name=WHI78803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175845.1;locus_tag=PYH62_08375;product=glycerophosphodiester phosphodiesterase;protein_id=WHI78803.1;transl_table=11 CP118825.1 Genbank gene 1698096 1699340 . - . ID=gene-PYH62_08380;Name=PYH62_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08380 CP118825.1 Protein Homology CDS 1698096 1699340 . - 0 ID=cds-WHI78804.1;Parent=gene-PYH62_08380;Dbxref=NCBI_GP:WHI78804.1;Name=WHI78804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503494.1;locus_tag=PYH62_08380;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=WHI78804.1;transl_table=11 CP118825.1 Genbank gene 1699448 1700638 . - . ID=gene-PYH62_08385;Name=PYH62_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08385 CP118825.1 Protein Homology CDS 1699448 1700638 . - 0 ID=cds-WHI78805.1;Parent=gene-PYH62_08385;Dbxref=NCBI_GP:WHI78805.1;Name=WHI78805.1;Ontology_term=GO:0004587,GO:0030170;gbkey=CDS;go_function=ornithine-oxo-acid transaminase activity|0004587||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499447.1;locus_tag=PYH62_08385;product=ornithine--oxo-acid transaminase;protein_id=WHI78805.1;transl_table=11 CP118825.1 Genbank gene 1700907 1702034 . - . ID=gene-PYH62_08390;Name=PYH62_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08390 CP118825.1 Protein Homology CDS 1700907 1702034 . - 0 ID=cds-WHI78806.1;Parent=gene-PYH62_08390;Dbxref=NCBI_GP:WHI78806.1;Name=WHI78806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499446.1;locus_tag=PYH62_08390;product=NADH-dependent flavin oxidoreductase;protein_id=WHI78806.1;transl_table=11 CP118825.1 Genbank gene 1702209 1702592 . - . ID=gene-PYH62_08395;Name=ygs;gbkey=Gene;gene=ygs;gene_biotype=protein_coding;locus_tag=PYH62_08395 CP118825.1 Protein Homology CDS 1702209 1702592 . - 0 ID=cds-WHI78807.1;Parent=gene-PYH62_08395;Dbxref=NCBI_GP:WHI78807.1;Name=WHI78807.1;gbkey=CDS;gene=ygs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455545.1;locus_tag=PYH62_08395;product=S1 domain-containing post-transcriptional regulator Ygs;protein_id=WHI78807.1;transl_table=11 CP118825.1 Genbank gene 1702820 1703422 . - . ID=gene-PYH62_08400;Name=PYH62_08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08400 CP118825.1 Protein Homology CDS 1702820 1703422 . - 0 ID=cds-WHI78808.1;Parent=gene-PYH62_08400;Dbxref=NCBI_GP:WHI78808.1;Name=WHI78808.1;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455546.1;locus_tag=PYH62_08400;product=peptidylprolyl isomerase;protein_id=WHI78808.1;transl_table=11 CP118825.1 Genbank gene 1703491 1703871 . + . ID=gene-PYH62_08405;Name=kapB;gbkey=Gene;gene=kapB;gene_biotype=protein_coding;locus_tag=PYH62_08405 CP118825.1 Protein Homology CDS 1703491 1703871 . + 0 ID=cds-WHI78809.1;Parent=gene-PYH62_08405;Dbxref=NCBI_GP:WHI78809.1;Name=WHI78809.1;gbkey=CDS;gene=kapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455547.1;locus_tag=PYH62_08405;product=sporulation phosphorelay system protein KapB;protein_id=WHI78809.1;transl_table=11 CP118825.1 Genbank gene 1704004 1706406 . + . ID=gene-PYH62_08410;Name=PYH62_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08410 CP118825.1 Protein Homology CDS 1704004 1706406 . + 0 ID=cds-WHI78810.1;Parent=gene-PYH62_08410;Dbxref=NCBI_GP:WHI78810.1;Name=WHI78810.1;Ontology_term=GO:0098662,GO:0051139;gbkey=CDS;go_function=metal cation:proton antiporter activity|0051139||IEA;go_process=inorganic cation transmembrane transport|0098662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499442.1;locus_tag=PYH62_08410;product=Na+/H+ antiporter subunit A;protein_id=WHI78810.1;transl_table=11 CP118825.1 Genbank gene 1706399 1706827 . + . ID=gene-PYH62_08415;Name=PYH62_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08415 CP118825.1 Protein Homology CDS 1706399 1706827 . + 0 ID=cds-WHI78811.1;Parent=gene-PYH62_08415;Dbxref=NCBI_GP:WHI78811.1;Name=WHI78811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276267.1;locus_tag=PYH62_08415;product=Na(+)/H(+) antiporter subunit B;protein_id=WHI78811.1;transl_table=11 CP118825.1 Genbank gene 1706827 1707174 . + . ID=gene-PYH62_08420;Name=mnhC1;gbkey=Gene;gene=mnhC1;gene_biotype=protein_coding;locus_tag=PYH62_08420 CP118825.1 Protein Homology CDS 1706827 1707174 . + 0 ID=cds-WHI78812.1;Parent=gene-PYH62_08420;Dbxref=NCBI_GP:WHI78812.1;Name=WHI78812.1;gbkey=CDS;gene=mnhC1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448250.1;locus_tag=PYH62_08420;product=Na+/H+ antiporter Mnh1 subunit C;protein_id=WHI78812.1;transl_table=11 CP118825.1 Genbank gene 1707161 1708660 . + . ID=gene-PYH62_08425;Name=PYH62_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08425 CP118825.1 Protein Homology CDS 1707161 1708660 . + 0 ID=cds-WHI78813.1;Parent=gene-PYH62_08425;Dbxref=NCBI_GP:WHI78813.1;Name=WHI78813.1;Ontology_term=GO:0042773,GO:0008137,GO:0015297;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,antiporter activity|0015297||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175852.1;locus_tag=PYH62_08425;product=Na+/H+ antiporter subunit D;protein_id=WHI78813.1;transl_table=11 CP118825.1 Genbank gene 1708660 1709139 . + . ID=gene-PYH62_08430;Name=PYH62_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08430 CP118825.1 Protein Homology CDS 1708660 1709139 . + 0 ID=cds-WHI78814.1;Parent=gene-PYH62_08430;Dbxref=NCBI_GP:WHI78814.1;Name=WHI78814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175853.1;locus_tag=PYH62_08430;product=Na+/H+ antiporter subunit E;protein_id=WHI78814.1;transl_table=11 CP118825.1 Genbank gene 1709139 1709429 . + . ID=gene-PYH62_08435;Name=PYH62_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08435 CP118825.1 Protein Homology CDS 1709139 1709429 . + 0 ID=cds-WHI78815.1;Parent=gene-PYH62_08435;Dbxref=NCBI_GP:WHI78815.1;Name=WHI78815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276271.1;locus_tag=PYH62_08435;product=Na(+)/H(+) antiporter subunit F1;protein_id=WHI78815.1;transl_table=11 CP118825.1 Genbank gene 1709407 1709763 . + . ID=gene-PYH62_08440;Name=PYH62_08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08440 CP118825.1 Protein Homology CDS 1709407 1709763 . + 0 ID=cds-WHI78816.1;Parent=gene-PYH62_08440;Dbxref=NCBI_GP:WHI78816.1;Name=WHI78816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276272.1;locus_tag=PYH62_08440;product=Na+/H+ antiporter subunit G1;protein_id=WHI78816.1;transl_table=11 CP118825.1 Genbank pseudogene 1709873 1711033 . + . ID=gene-PYH62_08445;Name=PYH62_08445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_08445;pseudo=true CP118825.1 Protein Homology CDS 1709873 1711033 . + 0 ID=cds-PYH62_08445;Parent=gene-PYH62_08445;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464942.1;locus_tag=PYH62_08445;product=NAD(P)-binding domain-containing protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1711091 1711465 . - . ID=gene-PYH62_08450;Name=PYH62_08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08450 CP118825.1 Protein Homology CDS 1711091 1711465 . - 0 ID=cds-WHI78817.1;Parent=gene-PYH62_08450;Dbxref=NCBI_GP:WHI78817.1;Name=WHI78817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831899.1;locus_tag=PYH62_08450;product=PaaI family thioesterase;protein_id=WHI78817.1;transl_table=11 CP118825.1 Genbank gene 1711484 1712803 . - . ID=gene-PYH62_08455;Name=PYH62_08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08455 CP118825.1 Protein Homology CDS 1711484 1712803 . - 0 ID=cds-WHI78818.1;Parent=gene-PYH62_08455;Dbxref=NCBI_GP:WHI78818.1;Name=WHI78818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499433.1;locus_tag=PYH62_08455;product=Na+/H+ antiporter family protein;protein_id=WHI78818.1;transl_table=11 CP118825.1 Genbank gene 1712997 1714475 . - . ID=gene-PYH62_08460;Name=PYH62_08460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08460 CP118825.1 Protein Homology CDS 1712997 1714475 . - 0 ID=cds-WHI78819.1;Parent=gene-PYH62_08460;Dbxref=NCBI_GP:WHI78819.1;Name=WHI78819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835069.1;locus_tag=PYH62_08460;product=leucyl aminopeptidase family protein;protein_id=WHI78819.1;transl_table=11 CP118825.1 Genbank gene 1714575 1715783 . - . ID=gene-PYH62_08465;Name=PYH62_08465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08465 CP118825.1 Protein Homology CDS 1714575 1715783 . - 0 ID=cds-WHI78820.1;Parent=gene-PYH62_08465;Dbxref=NCBI_GP:WHI78820.1;Name=WHI78820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499431.1;locus_tag=PYH62_08465;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WHI78820.1;transl_table=11 CP118825.1 Genbank gene 1716112 1716471 . - . ID=gene-PYH62_08470;Name=PYH62_08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08470 CP118825.1 Protein Homology CDS 1716112 1716471 . - 0 ID=cds-WHI78821.1;Parent=gene-PYH62_08470;Dbxref=NCBI_GP:WHI78821.1;Name=WHI78821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499430.1;locus_tag=PYH62_08470;product=iron-sulfur cluster assembly accessory protein;protein_id=WHI78821.1;transl_table=11 CP118825.1 Genbank gene 1716484 1716729 . - . ID=gene-PYH62_08475;Name=PYH62_08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08475 CP118825.1 Protein Homology CDS 1716484 1716729 . - 0 ID=cds-WHI78822.1;Parent=gene-PYH62_08475;Dbxref=NCBI_GP:WHI78822.1;Name=WHI78822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831896.1;locus_tag=PYH62_08475;product=YuzB family protein;protein_id=WHI78822.1;transl_table=11 CP118825.1 Genbank pseudogene 1717045 1718110 . + . ID=gene-PYH62_08480;Name=PYH62_08480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_08480;pseudo=true CP118825.1 Protein Homology CDS 1717045 1718110 . + 0 ID=cds-PYH62_08480;Parent=gene-PYH62_08480;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499428.1;locus_tag=PYH62_08480;product=NAD(P)/FAD-dependent oxidoreductase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1718202 1718525 . - . ID=gene-PYH62_08485;Name=PYH62_08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08485 CP118825.1 Protein Homology CDS 1718202 1718525 . - 0 ID=cds-WHI78823.1;Parent=gene-PYH62_08485;Dbxref=NCBI_GP:WHI78823.1;Name=WHI78823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448149.1;locus_tag=PYH62_08485;product=YuzD family protein;protein_id=WHI78823.1;transl_table=11 CP118825.1 Genbank gene 1718629 1718871 . + . ID=gene-PYH62_08490;Name=PYH62_08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08490 CP118825.1 Protein Homology CDS 1718629 1718871 . + 0 ID=cds-WHI78824.1;Parent=gene-PYH62_08490;Dbxref=NCBI_GP:WHI78824.1;Name=WHI78824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499426.1;locus_tag=PYH62_08490;product=NifU family protein;protein_id=WHI78824.1;transl_table=11 CP118825.1 Genbank gene 1718937 1720094 . - . ID=gene-PYH62_08495;Name=dltD;gbkey=Gene;gene=dltD;gene_biotype=protein_coding;locus_tag=PYH62_08495 CP118825.1 Protein Homology CDS 1718937 1720094 . - 0 ID=cds-WHI78825.1;Parent=gene-PYH62_08495;Dbxref=NCBI_GP:WHI78825.1;Name=WHI78825.1;Ontology_term=GO:0070394;gbkey=CDS;gene=dltD;go_process=lipoteichoic acid metabolic process|0070394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175864.1;locus_tag=PYH62_08495;product=D-alanyl-lipoteichoic acid biosynthesis protein DltD;protein_id=WHI78825.1;transl_table=11 CP118825.1 Genbank gene 1720091 1720327 . - . ID=gene-PYH62_08500;Name=dltC;gbkey=Gene;gene=dltC;gene_biotype=protein_coding;locus_tag=PYH62_08500 CP118825.1 Protein Homology CDS 1720091 1720327 . - 0 ID=cds-WHI80261.1;Parent=gene-PYH62_08500;Dbxref=NCBI_GP:WHI80261.1;Name=WHI80261.1;Ontology_term=GO:0019350,GO:0047473;gbkey=CDS;gene=dltC;go_function=D-alanine [D-alanyl carrier protein] ligase activity|0047473||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433359.1;locus_tag=PYH62_08500;product=D-alanine--poly(phosphoribitol) ligase subunit 2;protein_id=WHI80261.1;transl_table=11 CP118825.1 Genbank gene 1720343 1721557 . - . ID=gene-PYH62_08505;Name=dltB;gbkey=Gene;gene=dltB;gene_biotype=protein_coding;locus_tag=PYH62_08505 CP118825.1 Protein Homology CDS 1720343 1721557 . - 0 ID=cds-WHI78826.1;Parent=gene-PYH62_08505;Dbxref=NCBI_GP:WHI78826.1;Name=WHI78826.1;Ontology_term=GO:0070395,GO:0016746;gbkey=CDS;gene=dltB;go_function=acyltransferase activity|0016746||IEA;go_process=lipoteichoic acid biosynthetic process|0070395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499423.1;locus_tag=PYH62_08505;product=D-alanyl-lipoteichoic acid biosynthesis protein DltB;protein_id=WHI78826.1;transl_table=11 CP118825.1 Genbank gene 1721554 1723008 . - . ID=gene-PYH62_08510;Name=dltA;gbkey=Gene;gene=dltA;gene_biotype=protein_coding;locus_tag=PYH62_08510 CP118825.1 Protein Homology CDS 1721554 1723008 . - 0 ID=cds-WHI78827.1;Parent=gene-PYH62_08510;Dbxref=NCBI_GP:WHI78827.1;Name=WHI78827.1;Ontology_term=GO:0019350,GO:0047473;gbkey=CDS;gene=dltA;go_function=D-alanine [D-alanyl carrier protein] ligase activity|0047473||IEA;go_process=teichoic acid biosynthetic process|0019350||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276287.1;locus_tag=PYH62_08510;product=D-alanine--poly(phosphoribitol) ligase subunit DltA;protein_id=WHI78827.1;transl_table=11 CP118825.1 Genbank gene 1723023 1723169 . - . ID=gene-PYH62_08515;Name=PYH62_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08515 CP118825.1 Protein Homology CDS 1723023 1723169 . - 0 ID=cds-WHI78828.1;Parent=gene-PYH62_08515;Dbxref=NCBI_GP:WHI78828.1;Name=WHI78828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175867.1;locus_tag=PYH62_08515;product=teichoic acid D-Ala incorporation-associated protein DltX;protein_id=WHI78828.1;transl_table=11 CP118825.1 Genbank gene 1723529 1724317 . - . ID=gene-PYH62_08520;Name=PYH62_08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08520 CP118825.1 Protein Homology CDS 1723529 1724317 . - 0 ID=cds-WHI78829.1;Parent=gene-PYH62_08520;Dbxref=NCBI_GP:WHI78829.1;Name=WHI78829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448132.1;locus_tag=PYH62_08520;product=TIGR01457 family HAD-type hydrolase;protein_id=WHI78829.1;transl_table=11 CP118825.1 Genbank gene 1724317 1724751 . - . ID=gene-PYH62_08525;Name=PYH62_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08525 CP118825.1 Protein Homology CDS 1724317 1724751 . - 0 ID=cds-WHI78830.1;Parent=gene-PYH62_08525;Dbxref=NCBI_GP:WHI78830.1;Name=WHI78830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831932.1;locus_tag=PYH62_08525;product=DUF86 domain-containing protein;protein_id=WHI78830.1;transl_table=11 CP118825.1 Genbank gene 1724854 1725120 . + . ID=gene-PYH62_08530;Name=PYH62_08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08530 CP118825.1 Protein Homology CDS 1724854 1725120 . + 0 ID=cds-WHI78831.1;Parent=gene-PYH62_08530;Dbxref=NCBI_GP:WHI78831.1;Name=WHI78831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831957.1;locus_tag=PYH62_08530;product=DUF3055 domain-containing protein;protein_id=WHI78831.1;transl_table=11 CP118825.1 Genbank gene 1725174 1725560 . - . ID=gene-PYH62_08535;Name=PYH62_08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08535 CP118825.1 Protein Homology CDS 1725174 1725560 . - 0 ID=cds-WHI78832.1;Parent=gene-PYH62_08535;Dbxref=NCBI_GP:WHI78832.1;Name=WHI78832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448096.1;locus_tag=PYH62_08535;product=YutD family protein;protein_id=WHI78832.1;transl_table=11 CP118825.1 Genbank gene 1725764 1726684 . - . ID=gene-PYH62_08540;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=PYH62_08540 CP118825.1 Protein Homology CDS 1725764 1726684 . - 0 ID=cds-WHI78833.1;Parent=gene-PYH62_08540;Dbxref=NCBI_GP:WHI78833.1;Name=WHI78833.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448197.1;locus_tag=PYH62_08540;product=lipoyl synthase;protein_id=WHI78833.1;transl_table=11 CP118825.1 Genbank gene 1726796 1728127 . - . ID=gene-PYH62_08545;Name=PYH62_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08545 CP118825.1 Protein Homology CDS 1726796 1728127 . - 0 ID=cds-WHI78834.1;Parent=gene-PYH62_08545;Dbxref=NCBI_GP:WHI78834.1;Name=WHI78834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455561.1;locus_tag=PYH62_08545;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase;protein_id=WHI78834.1;transl_table=11 CP118825.1 Genbank gene 1728147 1728974 . - . ID=gene-PYH62_08550;Name=PYH62_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08550 CP118825.1 Protein Homology CDS 1728147 1728974 . - 0 ID=cds-WHI78835.1;Parent=gene-PYH62_08550;Dbxref=NCBI_GP:WHI78835.1;Name=WHI78835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499412.1;locus_tag=PYH62_08550;product=sulfite exporter TauE/SafE family protein;protein_id=WHI78835.1;transl_table=11 CP118825.1 Genbank gene 1728988 1729836 . - . ID=gene-PYH62_08555;Name=PYH62_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08555 CP118825.1 Protein Homology CDS 1728988 1729836 . - 0 ID=cds-WHI78836.1;Parent=gene-PYH62_08555;Dbxref=NCBI_GP:WHI78836.1;Name=WHI78836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499411.1;locus_tag=PYH62_08555;product=DUF72 domain-containing protein;protein_id=WHI78836.1;transl_table=11 CP118825.1 Genbank gene 1730173 1731570 . - . ID=gene-PYH62_08560;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=PYH62_08560 CP118825.1 Protein Homology CDS 1730173 1731570 . - 0 ID=cds-WHI78837.1;Parent=gene-PYH62_08560;Dbxref=NCBI_GP:WHI78837.1;Name=WHI78837.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufB;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469760.1;locus_tag=PYH62_08560;product=Fe-S cluster assembly protein SufB;protein_id=WHI78837.1;transl_table=11 CP118825.1 Genbank gene 1731732 1732193 . - . ID=gene-PYH62_08565;Name=PYH62_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08565 CP118825.1 Protein Homology CDS 1731732 1732193 . - 0 ID=cds-WHI78838.1;Parent=gene-PYH62_08565;Dbxref=NCBI_GP:WHI78838.1;Name=WHI78838.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276301.1;locus_tag=PYH62_08565;product=SUF system NifU family Fe-S cluster assembly protein;protein_id=WHI78838.1;transl_table=11 CP118825.1 Genbank gene 1732183 1733433 . - . ID=gene-PYH62_08570;Name=PYH62_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08570 CP118825.1 Protein Homology CDS 1732183 1733433 . - 0 ID=cds-WHI78839.1;Parent=gene-PYH62_08570;Dbxref=NCBI_GP:WHI78839.1;Name=WHI78839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499403.1;locus_tag=PYH62_08570;product=cysteine desulfurase;protein_id=WHI78839.1;transl_table=11 CP118825.1 Genbank gene 1733464 1734771 . - . ID=gene-PYH62_08575;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=PYH62_08575 CP118825.1 Protein Homology CDS 1733464 1734771 . - 0 ID=cds-WHI78840.1;Parent=gene-PYH62_08575;Dbxref=NCBI_GP:WHI78840.1;Name=WHI78840.1;Ontology_term=GO:0016226,GO:0005198;gbkey=CDS;gene=sufD;go_function=structural molecule activity|0005198||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499402.1;locus_tag=PYH62_08575;product=Fe-S cluster assembly protein SufD;protein_id=WHI78840.1;transl_table=11 CP118825.1 Genbank gene 1734894 1735655 . - . ID=gene-PYH62_08580;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=PYH62_08580 CP118825.1 Protein Homology CDS 1734894 1735655 . - 0 ID=cds-WHI78841.1;Parent=gene-PYH62_08580;Dbxref=NCBI_GP:WHI78841.1;Name=WHI78841.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499401.1;locus_tag=PYH62_08580;product=Fe-S cluster assembly ATPase SufC;protein_id=WHI78841.1;transl_table=11 CP118825.1 Genbank gene 1735979 1736836 . + . ID=gene-PYH62_08585;Name=PYH62_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08585 CP118825.1 Protein Homology CDS 1735979 1736836 . + 0 ID=cds-WHI78842.1;Parent=gene-PYH62_08585;Dbxref=NCBI_GP:WHI78842.1;Name=WHI78842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175875.1;locus_tag=PYH62_08585;product=DUF368 domain-containing protein;protein_id=WHI78842.1;transl_table=11 CP118825.1 Genbank gene 1736900 1737085 . - . ID=gene-PYH62_08590;Name=PYH62_08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08590 CP118825.1 Protein Homology CDS 1736900 1737085 . - 0 ID=cds-WHI78843.1;Parent=gene-PYH62_08590;Dbxref=NCBI_GP:WHI78843.1;Name=WHI78843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448111.1;locus_tag=PYH62_08590;product=CsbD family protein;protein_id=WHI78843.1;transl_table=11 CP118825.1 Genbank gene 1737261 1737425 . + . ID=gene-PYH62_08595;Name=PYH62_08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08595 CP118825.1 Protein Homology CDS 1737261 1737425 . + 0 ID=cds-WHI78844.1;Parent=gene-PYH62_08595;Dbxref=NCBI_GP:WHI78844.1;Name=WHI78844.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448129.1;locus_tag=PYH62_08595;product=hypothetical protein;protein_id=WHI78844.1;transl_table=11 CP118825.1 Genbank gene 1737516 1738331 . - . ID=gene-PYH62_08600;Name=PYH62_08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08600 CP118825.1 Protein Homology CDS 1737516 1738331 . - 0 ID=cds-WHI78845.1;Parent=gene-PYH62_08600;Dbxref=NCBI_GP:WHI78845.1;Name=WHI78845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499398.1;locus_tag=PYH62_08600;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WHI78845.1;transl_table=11 CP118825.1 Genbank gene 1738352 1739047 . - . ID=gene-PYH62_08605;Name=PYH62_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08605 CP118825.1 Protein Homology CDS 1738352 1739047 . - 0 ID=cds-WHI78846.1;Parent=gene-PYH62_08605;Dbxref=NCBI_GP:WHI78846.1;Name=WHI78846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499397.1;locus_tag=PYH62_08605;product=ABC transporter permease;protein_id=WHI78846.1;transl_table=11 CP118825.1 Genbank gene 1739040 1740065 . - . ID=gene-PYH62_08610;Name=PYH62_08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08610 CP118825.1 Protein Homology CDS 1739040 1740065 . - 0 ID=cds-WHI78847.1;Parent=gene-PYH62_08610;Dbxref=NCBI_GP:WHI78847.1;Name=WHI78847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499396.1;locus_tag=PYH62_08610;product=methionine ABC transporter ATP-binding protein;protein_id=WHI78847.1;transl_table=11 CP118825.1 cmsearch riboswitch 1740150 1740254 . - . ID=id-CP118825.1:1740150..1740254;Dbxref=RFAM:RF00162;Note=SAM riboswitch class I;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch CP118825.1 Genbank gene 1740309 1740608 . - . ID=gene-PYH62_08615;Name=PYH62_08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08615 CP118825.1 Protein Homology CDS 1740309 1740608 . - 0 ID=cds-WHI78848.1;Parent=gene-PYH62_08615;Dbxref=NCBI_GP:WHI78848.1;Name=WHI78848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448091.1;locus_tag=PYH62_08615;product=thioredoxin family protein;protein_id=WHI78848.1;transl_table=11 CP118825.1 Genbank gene 1740601 1740987 . - . ID=gene-PYH62_08620;Name=PYH62_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08620 CP118825.1 Protein Homology CDS 1740601 1740987 . - 0 ID=cds-WHI78849.1;Parent=gene-PYH62_08620;Dbxref=NCBI_GP:WHI78849.1;Name=WHI78849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499394.1;locus_tag=PYH62_08620;product=toprim domain-containing protein;protein_id=WHI78849.1;transl_table=11 CP118825.1 Genbank gene 1741124 1741504 . - . ID=gene-PYH62_08625;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=PYH62_08625 CP118825.1 Protein Homology CDS 1741124 1741504 . - 0 ID=cds-WHI78850.1;Parent=gene-PYH62_08625;Dbxref=NCBI_GP:WHI78850.1;Name=WHI78850.1;Ontology_term=GO:0019464,GO:0003824;gbkey=CDS;gene=gcvH;go_function=catalytic activity|0003824||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831963.1;locus_tag=PYH62_08625;product=glycine cleavage system protein GcvH;protein_id=WHI78850.1;transl_table=11 CP118825.1 Genbank gene 1741597 1741950 . - . ID=gene-PYH62_08630;Name=PYH62_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08630 CP118825.1 Protein Homology CDS 1741597 1741950 . - 0 ID=cds-WHI78851.1;Parent=gene-PYH62_08630;Dbxref=NCBI_GP:WHI78851.1;Name=WHI78851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002446009.1;locus_tag=PYH62_08630;product=arsenate reductase family protein;protein_id=WHI78851.1;transl_table=11 CP118825.1 Genbank gene 1742090 1742413 . + . ID=gene-PYH62_08635;Name=PYH62_08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08635 CP118825.1 Protein Homology CDS 1742090 1742413 . + 0 ID=cds-WHI78852.1;Parent=gene-PYH62_08635;Dbxref=NCBI_GP:WHI78852.1;Name=WHI78852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448188.1;locus_tag=PYH62_08635;product=thioredoxin family protein;protein_id=WHI78852.1;transl_table=11 CP118825.1 Genbank gene 1742451 1742990 . - . ID=gene-PYH62_08640;Name=PYH62_08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08640 CP118825.1 Protein Homology CDS 1742451 1742990 . - 0 ID=cds-WHI78853.1;Parent=gene-PYH62_08640;Dbxref=NCBI_GP:WHI78853.1;Name=WHI78853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000422918.1;locus_tag=PYH62_08640;product=nitroreductase;protein_id=WHI78853.1;transl_table=11 CP118825.1 Genbank pseudogene 1743060 1743786 . - . ID=gene-PYH62_08645;Name=aroD;gbkey=Gene;gene=aroD;gene_biotype=pseudogene;locus_tag=PYH62_08645;pseudo=true CP118825.1 Protein Homology CDS 1743060 1743786 . - 0 ID=cds-PYH62_08645;Parent=gene-PYH62_08645;Note=frameshifted;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroD;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455566.1;locus_tag=PYH62_08645;product=type I 3-dehydroquinate dehydratase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1743948 1744370 . + . ID=gene-PYH62_08650;Name=PYH62_08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08650 CP118825.1 Protein Homology CDS 1743948 1744370 . + 0 ID=cds-WHI78854.1;Parent=gene-PYH62_08650;Dbxref=NCBI_GP:WHI78854.1;Name=WHI78854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499385.1;locus_tag=PYH62_08650;product=organic hydroperoxide resistance protein;protein_id=WHI78854.1;transl_table=11 CP118825.1 Genbank gene 1744822 1745313 . + . ID=gene-PYH62_08655;Name=PYH62_08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08655 CP118825.1 Protein Homology CDS 1744822 1745313 . + 0 ID=cds-WHI78855.1;Parent=gene-PYH62_08655;Dbxref=NCBI_GP:WHI78855.1;Name=WHI78855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835710.1;locus_tag=PYH62_08655;product=GNAT family N-acetyltransferase;protein_id=WHI78855.1;transl_table=11 CP118825.1 Genbank gene 1745327 1745716 . - . ID=gene-PYH62_08660;Name=PYH62_08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08660 CP118825.1 Protein Homology CDS 1745327 1745716 . - 0 ID=cds-WHI78856.1;Parent=gene-PYH62_08660;Dbxref=NCBI_GP:WHI78856.1;Name=WHI78856.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012521.2;locus_tag=PYH62_08660;product=histidine phosphatase family protein;protein_id=WHI78856.1;transl_table=11 CP118825.1 Genbank gene 1745738 1745986 . + . ID=gene-PYH62_08665;Name=PYH62_08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08665 CP118825.1 Protein Homology CDS 1745738 1745986 . + 0 ID=cds-WHI78857.1;Parent=gene-PYH62_08665;Dbxref=NCBI_GP:WHI78857.1;Name=WHI78857.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024812.2;locus_tag=PYH62_08665;product=GNAT family N-acetyltransferase;protein_id=WHI78857.1;transl_table=11 CP118825.1 Genbank gene 1746001 1746600 . - . ID=gene-PYH62_08670;Name=PYH62_08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08670 CP118825.1 Protein Homology CDS 1746001 1746600 . - 0 ID=cds-WHI78858.1;Parent=gene-PYH62_08670;Dbxref=NCBI_GP:WHI78858.1;Name=WHI78858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175883.1;locus_tag=PYH62_08670;product=histidine phosphatase family protein;protein_id=WHI78858.1;transl_table=11 CP118825.1 Genbank gene 1746795 1747037 . + . ID=gene-PYH62_08675;Name=PYH62_08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08675 CP118825.1 Protein Homology CDS 1746795 1747037 . + 0 ID=cds-WHI78859.1;Parent=gene-PYH62_08675;Dbxref=NCBI_GP:WHI78859.1;Name=WHI78859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448133.1;locus_tag=PYH62_08675;product=hypothetical protein;protein_id=WHI78859.1;transl_table=11 CP118825.1 Genbank gene 1747029 1747232 . - . ID=gene-PYH62_08680;Name=PYH62_08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08680 CP118825.1 Protein Homology CDS 1747029 1747232 . - 0 ID=cds-WHI78860.1;Parent=gene-PYH62_08680;Dbxref=NCBI_GP:WHI78860.1;Name=WHI78860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474247.1;locus_tag=PYH62_08680;product=sterile alpha motif-like domain-containing protein;protein_id=WHI78860.1;transl_table=11 CP118825.1 Genbank gene 1747684 1747941 . + . ID=gene-PYH62_08685;Name=PYH62_08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08685 CP118825.1 Protein Homology CDS 1747684 1747941 . + 0 ID=cds-WHI78861.1;Parent=gene-PYH62_08685;Dbxref=NCBI_GP:WHI78861.1;Name=WHI78861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175886.1;locus_tag=PYH62_08685;product=hypothetical protein;protein_id=WHI78861.1;transl_table=11 CP118825.1 Genbank gene 1747964 1748152 . + . ID=gene-PYH62_08690;Name=PYH62_08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08690 CP118825.1 Protein Homology CDS 1747964 1748152 . + 0 ID=cds-WHI78862.1;Parent=gene-PYH62_08690;Dbxref=NCBI_GP:WHI78862.1;Name=WHI78862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445998.1;locus_tag=PYH62_08690;product=hypothetical protein;protein_id=WHI78862.1;transl_table=11 CP118825.1 Genbank gene 1748321 1748815 . + . ID=gene-PYH62_08695;Name=PYH62_08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08695 CP118825.1 Protein Homology CDS 1748321 1748815 . + 0 ID=cds-WHI80262.1;Parent=gene-PYH62_08695;Dbxref=NCBI_GP:WHI80262.1;Name=WHI80262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276327.1;locus_tag=PYH62_08695;product=hypothetical protein;protein_id=WHI80262.1;transl_table=11 CP118825.1 Genbank gene 1748889 1749635 . + . ID=gene-PYH62_08700;Name=PYH62_08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08700 CP118825.1 Protein Homology CDS 1748889 1749635 . + 0 ID=cds-WHI78863.1;Parent=gene-PYH62_08700;Dbxref=NCBI_GP:WHI78863.1;Name=WHI78863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448118.1;locus_tag=PYH62_08700;product=poly-gamma-glutamate hydrolase family protein;protein_id=WHI78863.1;transl_table=11 CP118825.1 Genbank gene 1749712 1749996 . + . ID=gene-PYH62_08705;Name=PYH62_08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08705 CP118825.1 Protein Homology CDS 1749712 1749996 . + 0 ID=cds-WHI78864.1;Parent=gene-PYH62_08705;Dbxref=NCBI_GP:WHI78864.1;Name=WHI78864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175890.1;locus_tag=PYH62_08705;product=hypothetical protein;protein_id=WHI78864.1;transl_table=11 CP118825.1 Genbank gene 1750152 1750379 . + . ID=gene-PYH62_08710;Name=PYH62_08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08710 CP118825.1 Protein Homology CDS 1750152 1750379 . + 0 ID=cds-WHI78865.1;Parent=gene-PYH62_08710;Dbxref=NCBI_GP:WHI78865.1;Name=WHI78865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455571.1;locus_tag=PYH62_08710;product=hypothetical protein;protein_id=WHI78865.1;transl_table=11 CP118825.1 Genbank gene 1750512 1751216 . + . ID=gene-PYH62_08715;Name=PYH62_08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08715 CP118825.1 Protein Homology CDS 1750512 1751216 . + 0 ID=cds-WHI78866.1;Parent=gene-PYH62_08715;Dbxref=NCBI_GP:WHI78866.1;Name=WHI78866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448164.1;locus_tag=PYH62_08715;product=hypothetical protein;protein_id=WHI78866.1;transl_table=11 CP118825.1 Genbank gene 1751352 1751528 . + . ID=gene-PYH62_08720;Name=PYH62_08720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08720 CP118825.1 Protein Homology CDS 1751352 1751528 . + 0 ID=cds-WHI78867.1;Parent=gene-PYH62_08720;Dbxref=NCBI_GP:WHI78867.1;Name=WHI78867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835718.1;locus_tag=PYH62_08720;product=hypothetical protein;protein_id=WHI78867.1;transl_table=11 CP118825.1 Genbank pseudogene 1751583 1752523 . - . ID=gene-PYH62_08725;Name=PYH62_08725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_08725;pseudo=true CP118825.1 Protein Homology CDS 1751583 1752523 . - 0 ID=cds-PYH62_08725;Parent=gene-PYH62_08725;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445993.1;locus_tag=PYH62_08725;product=cation diffusion facilitator family transporter;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1752958 1753266 . + . ID=gene-PYH62_08730;Name=PYH62_08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08730 CP118825.1 Protein Homology CDS 1752958 1753266 . + 0 ID=cds-WHI80263.1;Parent=gene-PYH62_08730;Dbxref=NCBI_GP:WHI80263.1;Name=WHI80263.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025015.2;locus_tag=PYH62_08730;product=SdpI family protein;protein_id=WHI80263.1;transl_table=11 CP118825.1 Genbank pseudogene 1753860 1754035 . + . ID=gene-PYH62_08735;Name=PYH62_08735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_08735;pseudo=true CP118825.1 Protein Homology CDS 1753860 1754035 . + 0 ID=cds-PYH62_08735;Parent=gene-PYH62_08735;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015728767.1;locus_tag=PYH62_08735;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1754045 1754275 . + . ID=gene-PYH62_08740;Name=PYH62_08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08740 CP118825.1 Protein Homology CDS 1754045 1754275 . + 0 ID=cds-WHI78868.1;Parent=gene-PYH62_08740;Dbxref=NCBI_GP:WHI78868.1;Name=WHI78868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500547.1;locus_tag=PYH62_08740;product=hypothetical protein;protein_id=WHI78868.1;transl_table=11 CP118825.1 Genbank gene 1754365 1754727 . - . ID=gene-PYH62_08745;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=PYH62_08745 CP118825.1 cmsearch tmRNA 1754365 1754727 . - . ID=rna-PYH62_08745;Parent=gene-PYH62_08745;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_08745;product=transfer-messenger RNA CP118825.1 cmsearch exon 1754365 1754727 . - . ID=exon-PYH62_08745-1;Parent=rna-PYH62_08745;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_08745;product=transfer-messenger RNA CP118825.1 Genbank gene 1754814 1755284 . - . ID=gene-PYH62_08750;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=PYH62_08750 CP118825.1 Protein Homology CDS 1754814 1755284 . - 0 ID=cds-WHI78869.1;Parent=gene-PYH62_08750;Dbxref=NCBI_GP:WHI78869.1;Name=WHI78869.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499360.1;locus_tag=PYH62_08750;product=SsrA-binding protein SmpB;protein_id=WHI78869.1;transl_table=11 CP118825.1 Genbank gene 1755309 1757687 . - . ID=gene-PYH62_08755;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=PYH62_08755 CP118825.1 Protein Homology CDS 1755309 1757687 . - 0 ID=cds-WHI78870.1;Parent=gene-PYH62_08755;Dbxref=NCBI_GP:WHI78870.1;Name=WHI78870.1;Ontology_term=GO:0006401,GO:0008997;gbkey=CDS;gene=rnr;go_function=ribonuclease R activity|0008997||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499359.1;locus_tag=PYH62_08755;product=ribonuclease R;protein_id=WHI78870.1;transl_table=11 CP118825.1 Genbank pseudogene 1757725 1758464 . - . ID=gene-PYH62_08760;Name=PYH62_08760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_08760;pseudo=true CP118825.1 Protein Homology CDS 1757725 1758464 . - 0 ID=cds-PYH62_08760;Parent=gene-PYH62_08760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499358.1;locus_tag=PYH62_08760;product=carboxylesterase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1758670 1758903 . - . ID=gene-PYH62_08765;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=PYH62_08765 CP118825.1 Protein Homology CDS 1758670 1758903 . - 0 ID=cds-WHI78871.1;Parent=gene-PYH62_08765;Dbxref=NCBI_GP:WHI78871.1;Name=WHI78871.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secG;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499357.2;locus_tag=PYH62_08765;product=preprotein translocase subunit SecG;protein_id=WHI78871.1;transl_table=11 CP118825.1 Genbank pseudogene 1758971 1759443 . - . ID=gene-PYH62_08770;Name=PYH62_08770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_08770;pseudo=true CP118825.1 Protein Homology CDS 1758971 1759443 . - 0 ID=cds-PYH62_08770;Parent=gene-PYH62_08770;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448043.1;locus_tag=PYH62_08770;product=hypothetical protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1759617 1760921 . - . ID=gene-PYH62_08775;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=PYH62_08775 CP118825.1 Protein Homology CDS 1759617 1760921 . - 0 ID=cds-WHI78872.1;Parent=gene-PYH62_08775;Dbxref=NCBI_GP:WHI78872.1;Name=WHI78872.1;Ontology_term=GO:0006096,GO:0004634;gbkey=CDS;gene=eno;go_function=phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002985288.1;locus_tag=PYH62_08775;product=phosphopyruvate hydratase;protein_id=WHI78872.1;transl_table=11 CP118825.1 Genbank gene 1761053 1762570 . - . ID=gene-PYH62_08780;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;locus_tag=PYH62_08780 CP118825.1 Protein Homology CDS 1761053 1762570 . - 0 ID=cds-WHI78873.1;Parent=gene-PYH62_08780;Dbxref=NCBI_GP:WHI78873.1;Name=WHI78873.1;Ontology_term=GO:0006096,GO:0046537;gbkey=CDS;gene=gpmI;go_function=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase activity|0046537||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002956091.1;locus_tag=PYH62_08780;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=WHI78873.1;transl_table=11 CP118825.1 Genbank gene 1762573 1763334 . - . ID=gene-PYH62_08785;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=PYH62_08785 CP118825.1 Protein Homology CDS 1762573 1763334 . - 0 ID=cds-WHI78874.1;Parent=gene-PYH62_08785;Dbxref=NCBI_GP:WHI78874.1;Name=WHI78874.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499353.1;locus_tag=PYH62_08785;product=triose-phosphate isomerase;protein_id=WHI78874.1;transl_table=11 CP118825.1 Genbank gene 1763446 1764636 . - . ID=gene-PYH62_08790;Name=PYH62_08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08790 CP118825.1 Protein Homology CDS 1763446 1764636 . - 0 ID=cds-WHI78875.1;Parent=gene-PYH62_08790;Dbxref=NCBI_GP:WHI78875.1;Name=WHI78875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499352.1;locus_tag=PYH62_08790;product=phosphoglycerate kinase;protein_id=WHI78875.1;transl_table=11 CP118825.1 Genbank gene 1764782 1765789 . - . ID=gene-PYH62_08795;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=PYH62_08795 CP118825.1 Protein Homology CDS 1764782 1765789 . - 0 ID=cds-WHI78876.1;Parent=gene-PYH62_08795;Dbxref=NCBI_GP:WHI78876.1;Name=WHI78876.1;Ontology_term=GO:0006094,GO:0006096,GO:0019682;gbkey=CDS;gene=gap;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA,glyceraldehyde-3-phosphate metabolic process|0019682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499351.1;locus_tag=PYH62_08795;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WHI78876.1;transl_table=11 CP118825.1 Genbank gene 1765836 1766855 . - . ID=gene-PYH62_08800;Name=PYH62_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08800 CP118825.1 Protein Homology CDS 1765836 1766855 . - 0 ID=cds-WHI78877.1;Parent=gene-PYH62_08800;Dbxref=NCBI_GP:WHI78877.1;Name=WHI78877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455605.1;locus_tag=PYH62_08800;product=sugar-binding domain-containing protein;protein_id=WHI78877.1;transl_table=11 CP118825.1 Genbank gene 1767123 1767350 . + . ID=gene-PYH62_08805;Name=PYH62_08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08805 CP118825.1 Protein Homology CDS 1767123 1767350 . + 0 ID=cds-WHI78878.1;Parent=gene-PYH62_08805;Dbxref=NCBI_GP:WHI78878.1;Name=WHI78878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448224.1;locus_tag=PYH62_08805;product=hypothetical protein;protein_id=WHI78878.1;transl_table=11 CP118825.1 Genbank gene 1767403 1768191 . - . ID=gene-PYH62_08810;Name=PYH62_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08810 CP118825.1 Protein Homology CDS 1767403 1768191 . - 0 ID=cds-WHI78879.1;Parent=gene-PYH62_08810;Dbxref=NCBI_GP:WHI78879.1;Name=WHI78879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175909.1;locus_tag=PYH62_08810;product=hypothetical protein;protein_id=WHI78879.1;transl_table=11 CP118825.1 Genbank gene 1768379 1768549 . + . ID=gene-PYH62_08815;Name=PYH62_08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08815 CP118825.1 Protein Homology CDS 1768379 1768549 . + 0 ID=cds-WHI78880.1;Parent=gene-PYH62_08815;Dbxref=NCBI_GP:WHI78880.1;Name=WHI78880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448117.1;locus_tag=PYH62_08815;product=hypothetical protein;protein_id=WHI78880.1;transl_table=11 CP118825.1 Genbank gene 1768823 1769722 . + . ID=gene-PYH62_08820;Name=PYH62_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08820 CP118825.1 Protein Homology CDS 1768823 1769722 . + 0 ID=cds-WHI78881.1;Parent=gene-PYH62_08820;Dbxref=NCBI_GP:WHI78881.1;Name=WHI78881.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455607.1;locus_tag=PYH62_08820;product=TIGR01777 family oxidoreductase;protein_id=WHI78881.1;transl_table=11 CP118825.1 Genbank gene 1769740 1769922 . + . ID=gene-PYH62_08825;Name=PYH62_08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08825 CP118825.1 Protein Homology CDS 1769740 1769922 . + 0 ID=cds-WHI78882.1;Parent=gene-PYH62_08825;Dbxref=NCBI_GP:WHI78882.1;Name=WHI78882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448125.1;locus_tag=PYH62_08825;product=hypothetical protein;protein_id=WHI78882.1;transl_table=11 CP118825.1 Genbank gene 1769975 1770562 . - . ID=gene-PYH62_08830;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=PYH62_08830 CP118825.1 Protein Homology CDS 1769975 1770562 . - 0 ID=cds-WHI78883.1;Parent=gene-PYH62_08830;Dbxref=NCBI_GP:WHI78883.1;Name=WHI78883.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175911.1;locus_tag=PYH62_08830;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WHI78883.1;transl_table=11 CP118825.1 Genbank gene 1770740 1770811 . + . ID=gene-PYH62_08835;Name=PYH62_08835;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_08835 CP118825.1 tRNAscan-SE tRNA 1770740 1770811 . + . ID=rna-PYH62_08835;Parent=gene-PYH62_08835;anticodon=(pos:1770773..1770775);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_08835;product=tRNA-Arg CP118825.1 tRNAscan-SE exon 1770740 1770811 . + . ID=exon-PYH62_08835-1;Parent=rna-PYH62_08835;anticodon=(pos:1770773..1770775);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_08835;product=tRNA-Arg CP118825.1 Genbank gene 1770884 1771828 . - . ID=gene-PYH62_08840;Name=whiA;gbkey=Gene;gene=whiA;gene_biotype=protein_coding;locus_tag=PYH62_08840 CP118825.1 Protein Homology CDS 1770884 1771828 . - 0 ID=cds-WHI78884.1;Parent=gene-PYH62_08840;Dbxref=NCBI_GP:WHI78884.1;Name=WHI78884.1;Ontology_term=GO:0043937,GO:0003677;gbkey=CDS;gene=whiA;go_function=DNA binding|0003677||IEA;go_process=regulation of sporulation|0043937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499346.1;locus_tag=PYH62_08840;product=DNA-binding protein WhiA;protein_id=WHI78884.1;transl_table=11 CP118825.1 Genbank gene 1771926 1772912 . - . ID=gene-PYH62_08845;Name=PYH62_08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08845 CP118825.1 Protein Homology CDS 1771926 1772912 . - 0 ID=cds-WHI78885.1;Parent=gene-PYH62_08845;Dbxref=NCBI_GP:WHI78885.1;Name=WHI78885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834951.1;locus_tag=PYH62_08845;product=YvcK family protein;protein_id=WHI78885.1;transl_table=11 CP118825.1 Genbank gene 1772909 1773823 . - . ID=gene-PYH62_08850;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=PYH62_08850 CP118825.1 Protein Homology CDS 1772909 1773823 . - 0 ID=cds-WHI78886.1;Parent=gene-PYH62_08850;Dbxref=NCBI_GP:WHI78886.1;Name=WHI78886.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448066.1;locus_tag=PYH62_08850;product=RNase adapter RapZ;protein_id=WHI78886.1;transl_table=11 CP118825.1 Genbank pseudogene 1773977 1774917 . - . ID=gene-PYH62_08855;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=pseudogene;locus_tag=PYH62_08855;pseudo=true CP118825.1 Protein Homology CDS 1773977 1774917 . - 0 ID=cds-PYH62_08855;Parent=gene-PYH62_08855;Note=frameshifted;Ontology_term=GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase activity|0004791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441551.1;locus_tag=PYH62_08855;product=thioredoxin-disulfide reductase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1774981 1776420 . - . ID=gene-PYH62_08860;Name=PYH62_08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08860 CP118825.1 Protein Homology CDS 1774981 1776420 . - 0 ID=cds-WHI78887.1;Parent=gene-PYH62_08860;Dbxref=NCBI_GP:WHI78887.1;Name=WHI78887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445953.1;locus_tag=PYH62_08860;product=tetratricopeptide repeat protein;protein_id=WHI78887.1;transl_table=11 CP118825.1 Genbank gene 1776438 1776917 . - . ID=gene-PYH62_08865;Name=PYH62_08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08865 CP118825.1 Protein Homology CDS 1776438 1776917 . - 0 ID=cds-WHI78888.1;Parent=gene-PYH62_08865;Dbxref=NCBI_GP:WHI78888.1;Name=WHI78888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175917.1;locus_tag=PYH62_08865;product=acyltransferase;protein_id=WHI78888.1;transl_table=11 CP118825.1 Genbank gene 1776917 1777759 . - . ID=gene-PYH62_08870;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=PYH62_08870 CP118825.1 Protein Homology CDS 1776917 1777759 . - 0 ID=cds-WHI78889.1;Parent=gene-PYH62_08870;Dbxref=NCBI_GP:WHI78889.1;Name=WHI78889.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455612.1;locus_tag=PYH62_08870;product=prolipoprotein diacylglyceryl transferase;protein_id=WHI78889.1;transl_table=11 CP118825.1 Genbank gene 1777763 1778698 . - . ID=gene-PYH62_08875;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=PYH62_08875 CP118825.1 Protein Homology CDS 1777763 1778698 . - 0 ID=cds-WHI78890.1;Parent=gene-PYH62_08875;Dbxref=NCBI_GP:WHI78890.1;Name=WHI78890.1;Ontology_term=GO:0009401,GO:0004674,GO:0016791;gbkey=CDS;gene=hprK;go_function=protein serine/threonine kinase activity|0004674||IEA,phosphatase activity|0016791||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175919.1;locus_tag=PYH62_08875;product=HPr(Ser) kinase/phosphatase;protein_id=WHI78890.1;transl_table=11 CP118825.1 Genbank pseudogene 1778877 1781718 . - . ID=gene-PYH62_08880;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=pseudogene;locus_tag=PYH62_08880;pseudo=true CP118825.1 Protein Homology CDS 1778877 1781718 . - 0 ID=cds-PYH62_08880;Parent=gene-PYH62_08880;Note=frameshifted;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448112.1;locus_tag=PYH62_08880;product=excinuclease ABC subunit UvrA;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1781726 1783711 . - . ID=gene-PYH62_08885;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=PYH62_08885 CP118825.1 Protein Homology CDS 1781726 1783711 . - 0 ID=cds-WHI78891.1;Parent=gene-PYH62_08885;Dbxref=NCBI_GP:WHI78891.1;Name=WHI78891.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002473941.1;locus_tag=PYH62_08885;product=excinuclease ABC subunit UvrB;protein_id=WHI78891.1;transl_table=11 CP118825.1 Genbank gene 1783979 1784206 . - . ID=gene-PYH62_08890;Name=PYH62_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08890 CP118825.1 Protein Homology CDS 1783979 1784206 . - 0 ID=cds-WHI78892.1;Parent=gene-PYH62_08890;Dbxref=NCBI_GP:WHI78892.1;Name=WHI78892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448072.1;locus_tag=PYH62_08890;product=CsbA family protein;protein_id=WHI78892.1;transl_table=11 CP118825.1 Genbank gene 1784212 1784859 . - . ID=gene-PYH62_08895;Name=PYH62_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08895 CP118825.1 Protein Homology CDS 1784212 1784859 . - 0 ID=cds-WHI78893.1;Parent=gene-PYH62_08895;Dbxref=NCBI_GP:WHI78893.1;Name=WHI78893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499331.1;locus_tag=PYH62_08895;product=HD domain-containing protein;protein_id=WHI78893.1;transl_table=11 CP118825.1 Genbank gene 1785068 1785952 . - . ID=gene-PYH62_08900;Name=PYH62_08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08900 CP118825.1 Protein Homology CDS 1785068 1785952 . - 0 ID=cds-WHI78894.1;Parent=gene-PYH62_08900;Dbxref=NCBI_GP:WHI78894.1;Name=WHI78894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455615.1;locus_tag=PYH62_08900;product=CHAP domain-containing protein;protein_id=WHI78894.1;transl_table=11 CP118825.1 Genbank gene 1786173 1787286 . - . ID=gene-PYH62_08905;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=PYH62_08905 CP118825.1 Protein Homology CDS 1787215 1787286 . - 0 ID=cds-WHI78895.1;Parent=gene-PYH62_08905;Dbxref=NCBI_GP:WHI78895.1;Name=WHI78895.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014667688.1;locus_tag=PYH62_08905;product=peptide chain release factor 2;protein_id=WHI78895.1;transl_table=11 CP118825.1 Protein Homology CDS 1786173 1787213 . - 0 ID=cds-WHI78895.1;Parent=gene-PYH62_08905;Dbxref=NCBI_GP:WHI78895.1;Name=WHI78895.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0003747;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014667688.1;locus_tag=PYH62_08905;product=peptide chain release factor 2;protein_id=WHI78895.1;transl_table=11 CP118825.1 Genbank gene 1787401 1789938 . - . ID=gene-PYH62_08910;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=PYH62_08910 CP118825.1 Protein Homology CDS 1787401 1789938 . - 0 ID=cds-WHI78896.1;Parent=gene-PYH62_08910;Dbxref=NCBI_GP:WHI78896.1;Name=WHI78896.1;Ontology_term=GO:0043952,GO:0015450,GO:0016887,GO:0009898;gbkey=CDS;gene=secA;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=protein-transporting ATPase activity|0015450||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276400.1;locus_tag=PYH62_08910;product=preprotein translocase subunit SecA;protein_id=WHI78896.1;transl_table=11 CP118825.1 Genbank gene 1790371 1790976 . - . ID=gene-PYH62_08915;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=PYH62_08915 CP118825.1 Protein Homology CDS 1790371 1790976 . - 0 ID=cds-WHI78897.1;Parent=gene-PYH62_08915;Dbxref=NCBI_GP:WHI78897.1;Name=WHI78897.1;Ontology_term=GO:0009386,GO:0045182,GO:0005840,GO:0022626;gbkey=CDS;gene=raiA;go_component=ribosome|0005840||IEA,cytosolic ribosome|0022626||IEA;go_function=translation regulator activity|0045182||IEA;go_process=translational attenuation|0009386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499325.1;locus_tag=PYH62_08915;product=ribosome-associated translation inhibitor RaiA;protein_id=WHI78897.1;transl_table=11 CP118825.1 Genbank gene 1791038 1791715 . - . ID=gene-PYH62_08920;Name=PYH62_08920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08920 CP118825.1 Protein Homology CDS 1791038 1791715 . - 0 ID=cds-WHI78898.1;Parent=gene-PYH62_08920;Dbxref=NCBI_GP:WHI78898.1;Name=WHI78898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002476228.1;locus_tag=PYH62_08920;product=ComF family protein;protein_id=WHI78898.1;transl_table=11 CP118825.1 Genbank gene 1791708 1792790 . - . ID=gene-PYH62_08925;Name=PYH62_08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08925 CP118825.1 Protein Homology CDS 1791708 1792790 . - 0 ID=cds-WHI78899.1;Parent=gene-PYH62_08925;Dbxref=NCBI_GP:WHI78899.1;Name=WHI78899.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479344.1;locus_tag=PYH62_08925;product=DEAD/DEAH box helicase family protein;protein_id=WHI78899.1;transl_table=11 CP118825.1 Genbank gene 1793097 1793963 . - . ID=gene-PYH62_08930;Name=fakB1;gbkey=Gene;gene=fakB1;gene_biotype=protein_coding;locus_tag=PYH62_08930 CP118825.1 Protein Homology CDS 1793097 1793963 . - 0 ID=cds-WHI78900.1;Parent=gene-PYH62_08930;Dbxref=NCBI_GP:WHI78900.1;Name=WHI78900.1;gbkey=CDS;gene=fakB1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448078.1;locus_tag=PYH62_08930;product=fatty acid kinase binding subunit FakB1;protein_id=WHI78900.1;transl_table=11 CP118825.1 Genbank gene 1794104 1794745 . + . ID=gene-PYH62_08935;Name=PYH62_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08935 CP118825.1 Protein Homology CDS 1794104 1794745 . + 0 ID=cds-WHI78901.1;Parent=gene-PYH62_08935;Dbxref=NCBI_GP:WHI78901.1;Name=WHI78901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175931.1;locus_tag=PYH62_08935;product=YigZ family protein;protein_id=WHI78901.1;transl_table=11 CP118825.1 Genbank gene 1794810 1795883 . - . ID=gene-PYH62_08940;Name=PYH62_08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08940 CP118825.1 Protein Homology CDS 1794810 1795883 . - 0 ID=cds-WHI78902.1;Parent=gene-PYH62_08940;Dbxref=NCBI_GP:WHI78902.1;Name=WHI78902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448031.1;locus_tag=PYH62_08940;product=MraY family glycosyltransferase;protein_id=WHI78902.1;transl_table=11 CP118825.1 Genbank gene 1796292 1797362 . + . ID=gene-PYH62_08945;Name=PYH62_08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08945 CP118825.1 Protein Homology CDS 1796292 1797362 . + 0 ID=cds-WHI78903.1;Parent=gene-PYH62_08945;Dbxref=NCBI_GP:WHI78903.1;Name=WHI78903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494710.1;locus_tag=PYH62_08945;product=GGDEF domain-containing protein;protein_id=WHI78903.1;transl_table=11 CP118825.1 Genbank pseudogene 1797570 1798332 . + . ID=gene-PYH62_08950;Name=PYH62_08950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_08950;pseudo=true CP118825.1 Protein Homology CDS 1797570 1798332 . + 0 ID=cds-PYH62_08950;Parent=gene-PYH62_08950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499318.1;locus_tag=PYH62_08950;product=threonine/serine exporter ThrE family protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1798349 1798843 . + . ID=gene-PYH62_08955;Name=PYH62_08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08955 CP118825.1 Protein Homology CDS 1798349 1798843 . + 0 ID=cds-WHI78904.1;Parent=gene-PYH62_08955;Dbxref=NCBI_GP:WHI78904.1;Name=WHI78904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499317.1;locus_tag=PYH62_08955;product=threonine/serine exporter family protein;protein_id=WHI78904.1;transl_table=11 CP118825.1 Genbank gene 1798858 1800087 . + . ID=gene-PYH62_08960;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=PYH62_08960 CP118825.1 Protein Homology CDS 1798858 1800087 . + 0 ID=cds-WHI78905.1;Parent=gene-PYH62_08960;Dbxref=NCBI_GP:WHI78905.1;Name=WHI78905.1;Ontology_term=GO:0006508,GO:0045148;gbkey=CDS;gene=pepT;go_function=tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276410.1;locus_tag=PYH62_08960;product=peptidase T;protein_id=WHI78905.1;transl_table=11 CP118825.1 Genbank pseudogene 1800133 1801258 . - . ID=gene-PYH62_08965;Name=PYH62_08965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_08965;pseudo=true CP118825.1 Protein Homology CDS 1800133 1801258 . - 0 ID=cds-PYH62_08965;Parent=gene-PYH62_08965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175935.1;locus_tag=PYH62_08965;product=glycerate kinase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1801462 1801782 . - . ID=gene-PYH62_08970;Name=ytxJ;gbkey=Gene;gene=ytxJ;gene_biotype=protein_coding;locus_tag=PYH62_08970 CP118825.1 Protein Homology CDS 1801462 1801782 . - 0 ID=cds-WHI78906.1;Parent=gene-PYH62_08970;Dbxref=NCBI_GP:WHI78906.1;Name=WHI78906.1;Ontology_term=GO:0006790;gbkey=CDS;gene=ytxJ;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499314.1;locus_tag=PYH62_08970;product=bacillithiol system redox-active protein YtxJ;protein_id=WHI78906.1;transl_table=11 CP118825.1 Genbank gene 1801897 1802775 . - . ID=gene-PYH62_08975;Name=PYH62_08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08975 CP118825.1 Protein Homology CDS 1801897 1802775 . - 0 ID=cds-WHI78907.1;Parent=gene-PYH62_08975;Dbxref=NCBI_GP:WHI78907.1;Name=WHI78907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175936.1;locus_tag=PYH62_08975;product=EMYY motif lipoprotein;protein_id=WHI78907.1;transl_table=11 CP118825.1 Genbank gene 1802883 1803398 . + . ID=gene-PYH62_08980;Name=PYH62_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08980 CP118825.1 Protein Homology CDS 1802883 1803398 . + 0 ID=cds-WHI78908.1;Parent=gene-PYH62_08980;Dbxref=NCBI_GP:WHI78908.1;Name=WHI78908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488024.1;locus_tag=PYH62_08980;product=GrpB family protein;protein_id=WHI78908.1;transl_table=11 CP118825.1 Genbank gene 1803492 1804418 . + . ID=gene-PYH62_08985;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=PYH62_08985 CP118825.1 Protein Homology CDS 1803492 1804418 . + 0 ID=cds-WHI78909.1;Parent=gene-PYH62_08985;Dbxref=NCBI_GP:WHI78909.1;Name=WHI78909.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455623.1;locus_tag=PYH62_08985;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WHI78909.1;transl_table=11 CP118825.1 Genbank gene 1804446 1804760 . + . ID=gene-PYH62_08990;Name=PYH62_08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08990 CP118825.1 Protein Homology CDS 1804446 1804760 . + 0 ID=cds-WHI78910.1;Parent=gene-PYH62_08990;Dbxref=NCBI_GP:WHI78910.1;Name=WHI78910.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455624.1;locus_tag=PYH62_08990;product=CHY zinc finger protein;protein_id=WHI78910.1;transl_table=11 CP118825.1 Genbank gene 1805003 1806037 . - . ID=gene-PYH62_08995;Name=PYH62_08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_08995 CP118825.1 Protein Homology CDS 1805003 1806037 . - 0 ID=cds-WHI78911.1;Parent=gene-PYH62_08995;Dbxref=NCBI_GP:WHI78911.1;Name=WHI78911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468875.1;locus_tag=PYH62_08995;product=ABC transporter substrate-binding protein;protein_id=WHI78911.1;transl_table=11 CP118825.1 Genbank gene 1806144 1806914 . - . ID=gene-PYH62_09000;Name=PYH62_09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09000 CP118825.1 Protein Homology CDS 1806144 1806914 . - 0 ID=cds-WHI78912.1;Parent=gene-PYH62_09000;Dbxref=NCBI_GP:WHI78912.1;Name=WHI78912.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449075.1;locus_tag=PYH62_09000;product=ATP-binding cassette domain-containing protein;protein_id=WHI78912.1;transl_table=11 CP118825.1 Genbank pseudogene 1806911 1807871 . - . ID=gene-PYH62_09005;Name=PYH62_09005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_09005;pseudo=true CP118825.1 Protein Homology CDS 1806911 1807871 . - 0 ID=cds-PYH62_09005;Parent=gene-PYH62_09005;Note=frameshifted;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491218.1;locus_tag=PYH62_09005;product=iron chelate uptake ABC transporter family permease subunit;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1807861 1808829 . - . ID=gene-PYH62_09010;Name=PYH62_09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09010 CP118825.1 Protein Homology CDS 1807861 1808829 . - 0 ID=cds-WHI78913.1;Parent=gene-PYH62_09010;Dbxref=NCBI_GP:WHI78913.1;Name=WHI78913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002450938.1;locus_tag=PYH62_09010;product=ABC transporter permease;protein_id=WHI78913.1;transl_table=11 CP118825.1 Genbank gene 1809014 1809982 . - . ID=gene-PYH62_09015;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=PYH62_09015 CP118825.1 Protein Homology CDS 1809014 1809982 . - 0 ID=cds-WHI78914.1;Parent=gene-PYH62_09015;Dbxref=NCBI_GP:WHI78914.1;Name=WHI78914.1;Ontology_term=GO:0009265,GO:0004748,GO:0030145,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,manganese ion binding|0030145||IEA;go_process=2'-deoxyribonucleotide biosynthetic process|0009265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491229.1;locus_tag=PYH62_09015;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WHI78914.1;transl_table=11 CP118825.1 Genbank gene 1810096 1812201 . - . ID=gene-PYH62_09020;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=PYH62_09020 CP118825.1 Protein Homology CDS 1810096 1812201 . - 0 ID=cds-WHI78915.1;Parent=gene-PYH62_09020;Dbxref=NCBI_GP:WHI78915.1;Name=WHI78915.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000855513.1;locus_tag=PYH62_09020;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WHI78915.1;transl_table=11 CP118825.1 Genbank gene 1812164 1812562 . - . ID=gene-PYH62_09025;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=PYH62_09025 CP118825.1 Protein Homology CDS 1812164 1812562 . - 0 ID=cds-WHI78916.1;Parent=gene-PYH62_09025;Dbxref=NCBI_GP:WHI78916.1;Name=WHI78916.1;Ontology_term=GO:0009263;gbkey=CDS;gene=nrdI;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499301.1;locus_tag=PYH62_09025;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WHI78916.1;transl_table=11 CP118825.1 Genbank gene 1813300 1814166 . + . ID=gene-PYH62_09030;Name=PYH62_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09030 CP118825.1 Protein Homology CDS 1813300 1814166 . + 0 ID=cds-WHI78917.1;Parent=gene-PYH62_09030;Dbxref=NCBI_GP:WHI78917.1;Name=WHI78917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175946.1;locus_tag=PYH62_09030;product=DMT family transporter;protein_id=WHI78917.1;transl_table=11 CP118825.1 Genbank gene 1814177 1814677 . + . ID=gene-PYH62_09035;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=PYH62_09035 CP118825.1 Protein Homology CDS 1814177 1814677 . + 0 ID=cds-WHI78918.1;Parent=gene-PYH62_09035;Dbxref=NCBI_GP:WHI78918.1;Name=WHI78918.1;Ontology_term=GO:0033739;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499299.1;locus_tag=PYH62_09035;product=preQ(1) synthase;protein_id=WHI78918.1;transl_table=11 CP118825.1 Genbank gene 1814978 1816483 . + . ID=gene-PYH62_09040;Name=PYH62_09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09040 CP118825.1 Protein Homology CDS 1814978 1816483 . + 0 ID=cds-WHI78919.1;Parent=gene-PYH62_09040;Dbxref=NCBI_GP:WHI78919.1;Name=WHI78919.1;Note=This POT (proton-coupled oligopeptide transporter) family MFS transporter imports the odorless precursor of methyl-3-sulfanylhexan-1-ol (3M3SH)%2C a major component of human body odor.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_048682169.1;locus_tag=PYH62_09040;product=S-Cys-Gly-3M3SH uptake peptide MFS transporter;protein_id=WHI78919.1;transl_table=11 CP118825.1 Genbank gene 1816613 1817536 . + . ID=gene-PYH62_09045;Name=PYH62_09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09045 CP118825.1 Protein Homology CDS 1816613 1817536 . + 0 ID=cds-WHI78920.1;Parent=gene-PYH62_09045;Dbxref=NCBI_GP:WHI78920.1;Name=WHI78920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276429.1;locus_tag=PYH62_09045;product=diacylglycerol kinase family lipid kinase;protein_id=WHI78920.1;transl_table=11 CP118825.1 Genbank gene 1817599 1818135 . - . ID=gene-PYH62_09050;Name=PYH62_09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09050 CP118825.1 Protein Homology CDS 1817599 1818135 . - 0 ID=cds-WHI78921.1;Parent=gene-PYH62_09050;Dbxref=NCBI_GP:WHI78921.1;Name=WHI78921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175949.1;locus_tag=PYH62_09050;product=5'(3')-deoxyribonucleotidase;protein_id=WHI78921.1;transl_table=11 CP118825.1 Genbank gene 1818230 1819285 . - . ID=gene-PYH62_09055;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=PYH62_09055 CP118825.1 Protein Homology CDS 1818230 1819285 . - 0 ID=cds-WHI78922.1;Parent=gene-PYH62_09055;Dbxref=NCBI_GP:WHI78922.1;Name=WHI78922.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276431.1;locus_tag=PYH62_09055;product=histidinol-phosphate transaminase;protein_id=WHI78922.1;transl_table=11 CP118825.1 Genbank gene 1819421 1820935 . - . ID=gene-PYH62_09060;Name=PYH62_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09060 CP118825.1 Protein Homology CDS 1819421 1820935 . - 0 ID=cds-WHI78923.1;Parent=gene-PYH62_09060;Dbxref=NCBI_GP:WHI78923.1;Name=WHI78923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455632.1;locus_tag=PYH62_09060;product=ABC transporter permease/substrate-binding protein;protein_id=WHI78923.1;transl_table=11 CP118825.1 Genbank gene 1820939 1821895 . - . ID=gene-PYH62_09065;Name=PYH62_09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09065 CP118825.1 Protein Homology CDS 1820939 1821895 . - 0 ID=cds-WHI78924.1;Parent=gene-PYH62_09065;Dbxref=NCBI_GP:WHI78924.1;Name=WHI78924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834934.1;locus_tag=PYH62_09065;product=ABC transporter ATP-binding protein;protein_id=WHI78924.1;transl_table=11 CP118825.1 Genbank gene 1822085 1823863 . - . ID=gene-PYH62_09070;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=PYH62_09070 CP118825.1 Protein Homology CDS 1822085 1823863 . - 0 ID=cds-WHI78925.1;Parent=gene-PYH62_09070;Dbxref=NCBI_GP:WHI78925.1;Name=WHI78925.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494713.1;locus_tag=PYH62_09070;product=DNA helicase RecQ;protein_id=WHI78925.1;transl_table=11 CP118825.1 Genbank gene 1823877 1825757 . - . ID=gene-PYH62_09075;Name=PYH62_09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09075 CP118825.1 Protein Homology CDS 1823877 1825757 . - 0 ID=cds-WHI78926.1;Parent=gene-PYH62_09075;Dbxref=NCBI_GP:WHI78926.1;Name=WHI78926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002433466.1;locus_tag=PYH62_09075;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WHI78926.1;transl_table=11 CP118825.1 Genbank gene 1825869 1826687 . + . ID=gene-PYH62_09080;Name=PYH62_09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09080 CP118825.1 Protein Homology CDS 1825869 1826687 . + 0 ID=cds-WHI78927.1;Parent=gene-PYH62_09080;Dbxref=NCBI_GP:WHI78927.1;Name=WHI78927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505461.1;locus_tag=PYH62_09080;product=ZIP family metal transporter;protein_id=WHI78927.1;transl_table=11 CP118825.1 Genbank gene 1826979 1828916 . - . ID=gene-PYH62_09085;Name=ltaS;gbkey=Gene;gene=ltaS;gene_biotype=protein_coding;locus_tag=PYH62_09085 CP118825.1 Protein Homology CDS 1826979 1828916 . - 0 ID=cds-WHI78928.1;Parent=gene-PYH62_09085;Dbxref=NCBI_GP:WHI78928.1;Name=WHI78928.1;gbkey=CDS;gene=ltaS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834931.1;locus_tag=PYH62_09085;product=polyglycerol-phosphate lipoteichoic acid synthase LtaS;protein_id=WHI78928.1;transl_table=11 CP118825.1 Genbank gene 1829324 1830328 . - . ID=gene-PYH62_09090;Name=PYH62_09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09090 CP118825.1 Protein Homology CDS 1829324 1830328 . - 0 ID=cds-WHI78929.1;Parent=gene-PYH62_09090;Dbxref=NCBI_GP:WHI78929.1;Name=WHI78929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499286.1;locus_tag=PYH62_09090;product=biotin-dependent carboxyltransferase family protein;protein_id=WHI78929.1;transl_table=11 CP118825.1 Genbank gene 1830328 1831032 . - . ID=gene-PYH62_09095;Name=PYH62_09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09095 CP118825.1 Protein Homology CDS 1830328 1831032 . - 0 ID=cds-WHI78930.1;Parent=gene-PYH62_09095;Dbxref=NCBI_GP:WHI78930.1;Name=WHI78930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455636.1;locus_tag=PYH62_09095;product=allophanate hydrolase subunit 1;protein_id=WHI78930.1;transl_table=11 CP118825.1 Genbank gene 1831074 1831280 . - . ID=gene-PYH62_09100;Name=PYH62_09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09100 CP118825.1 Protein Homology CDS 1831074 1831280 . - 0 ID=cds-WHI78931.1;Parent=gene-PYH62_09100;Dbxref=NCBI_GP:WHI78931.1;Name=WHI78931.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449078.1;locus_tag=PYH62_09100;product=hypothetical protein;protein_id=WHI78931.1;transl_table=11 CP118825.1 Genbank gene 1831334 1831942 . - . ID=gene-PYH62_09105;Name=PYH62_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09105 CP118825.1 Protein Homology CDS 1831334 1831942 . - 0 ID=cds-WHI78932.1;Parent=gene-PYH62_09105;Dbxref=NCBI_GP:WHI78932.1;Name=WHI78932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449082.1;locus_tag=PYH62_09105;product=aminotransferase class IV;protein_id=WHI78932.1;transl_table=11 CP118825.1 Genbank gene 1831943 1833085 . - . ID=gene-PYH62_09110;Name=PYH62_09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09110 CP118825.1 Protein Homology CDS 1831943 1833085 . - 0 ID=cds-WHI78933.1;Parent=gene-PYH62_09110;Dbxref=NCBI_GP:WHI78933.1;Name=WHI78933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449090.1;locus_tag=PYH62_09110;product=anthranilate synthase component I family protein;protein_id=WHI78933.1;transl_table=11 CP118825.1 Genbank gene 1833069 1833662 . - . ID=gene-PYH62_09115;Name=PYH62_09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09115 CP118825.1 Protein Homology CDS 1833069 1833662 . - 0 ID=cds-WHI78934.1;Parent=gene-PYH62_09115;Dbxref=NCBI_GP:WHI78934.1;Name=WHI78934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455637.1;locus_tag=PYH62_09115;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WHI78934.1;transl_table=11 CP118825.1 Genbank gene 1833993 1834670 . + . ID=gene-PYH62_09120;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=PYH62_09120 CP118825.1 Protein Homology CDS 1833993 1834670 . + 0 ID=cds-WHI78935.1;Parent=gene-PYH62_09120;Dbxref=NCBI_GP:WHI78935.1;Name=WHI78935.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449071.1;locus_tag=PYH62_09120;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WHI78935.1;transl_table=11 CP118825.1 Genbank gene 1834667 1835086 . + . ID=gene-PYH62_09125;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=PYH62_09125 CP118825.1 Protein Homology CDS 1834667 1835086 . + 0 ID=cds-WHI78936.1;Parent=gene-PYH62_09125;Dbxref=NCBI_GP:WHI78936.1;Name=WHI78936.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449084.1;locus_tag=PYH62_09125;product=6-carboxytetrahydropterin synthase QueD;protein_id=WHI78936.1;transl_table=11 CP118825.1 Genbank gene 1835086 1835802 . + . ID=gene-PYH62_09130;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=PYH62_09130 CP118825.1 Protein Homology CDS 1835086 1835802 . + 0 ID=cds-WHI78937.1;Parent=gene-PYH62_09130;Dbxref=NCBI_GP:WHI78937.1;Name=WHI78937.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834926.1;locus_tag=PYH62_09130;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WHI78937.1;transl_table=11 CP118825.1 Genbank gene 1835911 1836519 . + . ID=gene-PYH62_09135;Name=PYH62_09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09135 CP118825.1 Protein Homology CDS 1835911 1836519 . + 0 ID=cds-WHI78938.1;Parent=gene-PYH62_09135;Dbxref=NCBI_GP:WHI78938.1;Name=WHI78938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449079.1;locus_tag=PYH62_09135;product=hypothetical protein;protein_id=WHI78938.1;transl_table=11 CP118825.1 Genbank gene 1836564 1837547 . - . ID=gene-PYH62_09140;Name=PYH62_09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09140 CP118825.1 Protein Homology CDS 1836564 1837547 . - 0 ID=cds-WHI78939.1;Parent=gene-PYH62_09140;Dbxref=NCBI_GP:WHI78939.1;Name=WHI78939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834925.1;locus_tag=PYH62_09140;product=glycosyltransferase family 2 protein;protein_id=WHI78939.1;transl_table=11 CP118825.1 Genbank gene 1837675 1838514 . - . ID=gene-PYH62_09145;Name=PYH62_09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09145 CP118825.1 Protein Homology CDS 1837675 1838514 . - 0 ID=cds-WHI78940.1;Parent=gene-PYH62_09145;Dbxref=NCBI_GP:WHI78940.1;Name=WHI78940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445895.1;locus_tag=PYH62_09145;product=aldo/keto reductase;protein_id=WHI78940.1;transl_table=11 CP118825.1 Genbank gene 1838627 1839997 . - . ID=gene-PYH62_09150;Name=PYH62_09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09150 CP118825.1 Protein Homology CDS 1838627 1839997 . - 0 ID=cds-WHI78941.1;Parent=gene-PYH62_09150;Dbxref=NCBI_GP:WHI78941.1;Name=WHI78941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455640.1;locus_tag=PYH62_09150;product=hemolysin family protein;protein_id=WHI78941.1;transl_table=11 CP118825.1 Genbank gene 1840832 1842802 . - . ID=gene-PYH62_09155;Name=PYH62_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09155 CP118825.1 Protein Homology CDS 1840832 1842802 . - 0 ID=cds-WHI78942.1;Parent=gene-PYH62_09155;Dbxref=NCBI_GP:WHI78942.1;Name=WHI78942.1;Ontology_term=GO:0009401,GO:0022877,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity|0022877||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499267.1;locus_tag=PYH62_09155;product=fructose-specific PTS transporter subunit EIIC;protein_id=WHI78942.1;transl_table=11 CP118825.1 Genbank gene 1842808 1843728 . - . ID=gene-PYH62_09160;Name=pfkB;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=PYH62_09160 CP118825.1 Protein Homology CDS 1842808 1843728 . - 0 ID=cds-WHI78943.1;Parent=gene-PYH62_09160;Dbxref=NCBI_GP:WHI78943.1;Name=WHI78943.1;Ontology_term=GO:0008662;gbkey=CDS;gene=pfkB;go_function=1-phosphofructokinase activity|0008662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499266.1;locus_tag=PYH62_09160;product=1-phosphofructokinase;protein_id=WHI78943.1;transl_table=11 CP118825.1 Genbank gene 1843731 1844486 . - . ID=gene-PYH62_09165;Name=PYH62_09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09165 CP118825.1 Protein Homology CDS 1843731 1844486 . - 0 ID=cds-WHI78944.1;Parent=gene-PYH62_09165;Dbxref=NCBI_GP:WHI78944.1;Name=WHI78944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449563.1;locus_tag=PYH62_09165;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WHI78944.1;transl_table=11 CP118825.1 Genbank gene 1844635 1845090 . - . ID=gene-PYH62_09170;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=PYH62_09170 CP118825.1 Protein Homology CDS 1844635 1845090 . - 0 ID=cds-WHI80264.1;Parent=gene-PYH62_09170;Dbxref=NCBI_GP:WHI80264.1;Name=WHI80264.1;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002459774.1;locus_tag=PYH62_09170;product=Cys-tRNA(Pro) deacylase;protein_id=WHI80264.1;transl_table=11 CP118825.1 Genbank gene 1845245 1845721 . - . ID=gene-PYH62_09175;Name=PYH62_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09175 CP118825.1 Protein Homology CDS 1845245 1845721 . - 0 ID=cds-WHI78945.1;Parent=gene-PYH62_09175;Dbxref=NCBI_GP:WHI78945.1;Name=WHI78945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449552.1;locus_tag=PYH62_09175;product=hypothetical protein;protein_id=WHI78945.1;transl_table=11 CP118825.1 Genbank gene 1845880 1847043 . - . ID=gene-PYH62_09180;Name=norA;gbkey=Gene;gene=norA;gene_biotype=protein_coding;locus_tag=PYH62_09180 CP118825.1 Protein Homology CDS 1845880 1847043 . - 0 ID=cds-WHI78946.1;Parent=gene-PYH62_09180;Dbxref=NCBI_GP:WHI78946.1;Name=WHI78946.1;gbkey=CDS;gene=norA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449564.1;locus_tag=PYH62_09180;product=multidrug efflux MFS transporter NorA;protein_id=WHI78946.1;transl_table=11 CP118825.1 Genbank gene 1847432 1848049 . + . ID=gene-PYH62_09185;Name=PYH62_09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09185 CP118825.1 Protein Homology CDS 1847432 1848049 . + 0 ID=cds-WHI78947.1;Parent=gene-PYH62_09185;Dbxref=NCBI_GP:WHI78947.1;Name=WHI78947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834919.1;locus_tag=PYH62_09185;product=DUF1361 domain-containing protein;protein_id=WHI78947.1;transl_table=11 CP118825.1 Genbank gene 1848179 1849552 . - . ID=gene-PYH62_09190;Name=PYH62_09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09190 CP118825.1 Protein Homology CDS 1848179 1849552 . - 0 ID=cds-WHI78948.1;Parent=gene-PYH62_09190;Dbxref=NCBI_GP:WHI78948.1;Name=WHI78948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488569.1;locus_tag=PYH62_09190;product=deoxyribodipyrimidine photo-lyase;protein_id=WHI78948.1;transl_table=11 CP118825.1 Genbank gene 1849693 1849992 . - . ID=gene-PYH62_09195;Name=PYH62_09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09195 CP118825.1 Protein Homology CDS 1849693 1849992 . - 0 ID=cds-WHI78949.1;Parent=gene-PYH62_09195;Dbxref=NCBI_GP:WHI78949.1;Name=WHI78949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834917.1;locus_tag=PYH62_09195;product=hypothetical protein;protein_id=WHI78949.1;transl_table=11 CP118825.1 Genbank gene 1850115 1851038 . - . ID=gene-PYH62_09200;Name=PYH62_09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09200 CP118825.1 Protein Homology CDS 1850115 1851038 . - 0 ID=cds-WHI78950.1;Parent=gene-PYH62_09200;Dbxref=NCBI_GP:WHI78950.1;Name=WHI78950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804910.1;locus_tag=PYH62_09200;product=GTP-binding protein;protein_id=WHI78950.1;transl_table=11 CP118825.1 Genbank gene 1851261 1851638 . + . ID=gene-PYH62_09205;Name=PYH62_09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09205 CP118825.1 Protein Homology CDS 1851261 1851638 . + 0 ID=cds-WHI78951.1;Parent=gene-PYH62_09205;Dbxref=NCBI_GP:WHI78951.1;Name=WHI78951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499253.1;locus_tag=PYH62_09205;product=MarR family transcriptional regulator;protein_id=WHI78951.1;transl_table=11 CP118825.1 Genbank gene 1851814 1853481 . - . ID=gene-PYH62_09210;Name=PYH62_09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09210 CP118825.1 Protein Homology CDS 1851814 1853481 . - 0 ID=cds-WHI78952.1;Parent=gene-PYH62_09210;Dbxref=NCBI_GP:WHI78952.1;Name=WHI78952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488562.1;locus_tag=PYH62_09210;product=amino acid ABC transporter ATP-binding/permease protein;protein_id=WHI78952.1;transl_table=11 CP118825.1 Genbank gene 1853465 1855108 . - . ID=gene-PYH62_09215;Name=PYH62_09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09215 CP118825.1 Protein Homology CDS 1853465 1855108 . - 0 ID=cds-WHI78953.1;Parent=gene-PYH62_09215;Dbxref=NCBI_GP:WHI78953.1;Name=WHI78953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834914.1;locus_tag=PYH62_09215;product=ABC transporter ATP-binding protein/permease;protein_id=WHI78953.1;transl_table=11 CP118825.1 Genbank gene 1855396 1856265 . + . ID=gene-PYH62_09220;Name=PYH62_09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09220 CP118825.1 Protein Homology CDS 1855396 1856265 . + 0 ID=cds-WHI78954.1;Parent=gene-PYH62_09220;Dbxref=NCBI_GP:WHI78954.1;Name=WHI78954.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499250.1;locus_tag=PYH62_09220;product=undecaprenyl-diphosphate phosphatase;protein_id=WHI78954.1;transl_table=11 CP118825.1 Genbank pseudogene 1856407 1856808 . + . ID=gene-PYH62_09225;Name=PYH62_09225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_09225;pseudo=true CP118825.1 Protein Homology CDS 1856407 1856808 . + 0 ID=cds-PYH62_09225;Parent=gene-PYH62_09225;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489208.1;locus_tag=PYH62_09225;product=hypothetical protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1856883 1857344 . + . ID=gene-PYH62_09230;Name=PYH62_09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09230 CP118825.1 Protein Homology CDS 1856883 1857344 . + 0 ID=cds-WHI78955.1;Parent=gene-PYH62_09230;Dbxref=NCBI_GP:WHI78955.1;Name=WHI78955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449579.1;locus_tag=PYH62_09230;product=YaiI/YqxD family protein;protein_id=WHI78955.1;transl_table=11 CP118825.1 Genbank gene 1857341 1857907 . + . ID=gene-PYH62_09235;Name=PYH62_09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09235 CP118825.1 Protein Homology CDS 1857341 1857907 . + 0 ID=cds-WHI78956.1;Parent=gene-PYH62_09235;Dbxref=NCBI_GP:WHI78956.1;Name=WHI78956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499247.1;locus_tag=PYH62_09235;product=TIGR00730 family Rossman fold protein;protein_id=WHI78956.1;transl_table=11 CP118825.1 Genbank gene 1858135 1858680 . - . ID=gene-PYH62_09240;Name=PYH62_09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09240 CP118825.1 Protein Homology CDS 1858135 1858680 . - 0 ID=cds-WHI78957.1;Parent=gene-PYH62_09240;Dbxref=NCBI_GP:WHI78957.1;Name=WHI78957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175981.1;locus_tag=PYH62_09240;product=GNAT family N-acetyltransferase;protein_id=WHI78957.1;transl_table=11 CP118825.1 Genbank gene 1858781 1859077 . - . ID=gene-PYH62_09245;Name=PYH62_09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09245 CP118825.1 Protein Homology CDS 1858781 1859077 . - 0 ID=cds-WHI78958.1;Parent=gene-PYH62_09245;Dbxref=NCBI_GP:WHI78958.1;Name=WHI78958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445863.1;locus_tag=PYH62_09245;product=hypothetical protein;protein_id=WHI78958.1;transl_table=11 CP118825.1 Genbank gene 1859232 1859609 . - . ID=gene-PYH62_09250;Name=PYH62_09250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09250 CP118825.1 Protein Homology CDS 1859232 1859609 . - 0 ID=cds-WHI78959.1;Parent=gene-PYH62_09250;Dbxref=NCBI_GP:WHI78959.1;Name=WHI78959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175983.1;locus_tag=PYH62_09250;product=hypothetical protein;protein_id=WHI78959.1;transl_table=11 CP118825.1 Genbank gene 1859677 1860129 . - . ID=gene-PYH62_09255;Name=PYH62_09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09255 CP118825.1 Protein Homology CDS 1859677 1860129 . - 0 ID=cds-WHI78960.1;Parent=gene-PYH62_09255;Dbxref=NCBI_GP:WHI78960.1;Name=WHI78960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175984.1;locus_tag=PYH62_09255;product=GNAT family N-acetyltransferase;protein_id=WHI78960.1;transl_table=11 CP118825.1 Genbank gene 1860252 1860941 . + . ID=gene-PYH62_09260;Name=PYH62_09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09260 CP118825.1 Protein Homology CDS 1860252 1860941 . + 0 ID=cds-WHI78961.1;Parent=gene-PYH62_09260;Dbxref=NCBI_GP:WHI78961.1;Name=WHI78961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002457522.1;locus_tag=PYH62_09260;product=DUF1129 family protein;protein_id=WHI78961.1;transl_table=11 CP118825.1 Genbank gene 1861127 1862347 . - . ID=gene-PYH62_09265;Name=PYH62_09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09265 CP118825.1 Protein Homology CDS 1861127 1862347 . - 0 ID=cds-WHI78962.1;Parent=gene-PYH62_09265;Dbxref=NCBI_GP:WHI78962.1;Name=WHI78962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455653.1;locus_tag=PYH62_09265;product=sugar efflux transporter;protein_id=WHI78962.1;transl_table=11 CP118825.1 Genbank gene 1862394 1863248 . - . ID=gene-PYH62_09270;Name=PYH62_09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09270 CP118825.1 Protein Homology CDS 1862394 1863248 . - 0 ID=cds-WHI78963.1;Parent=gene-PYH62_09270;Dbxref=NCBI_GP:WHI78963.1;Name=WHI78963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930914.1;locus_tag=PYH62_09270;product=LysR family transcriptional regulator;protein_id=WHI78963.1;transl_table=11 CP118825.1 Genbank gene 1863341 1863898 . - . ID=gene-PYH62_09275;Name=PYH62_09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09275 CP118825.1 Protein Homology CDS 1863341 1863898 . - 0 ID=cds-WHI78964.1;Parent=gene-PYH62_09275;Dbxref=NCBI_GP:WHI78964.1;Name=WHI78964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449585.1;locus_tag=PYH62_09275;product=DUF402 domain-containing protein;protein_id=WHI78964.1;transl_table=11 CP118825.1 Genbank pseudogene 1864113 1865216 . + . ID=gene-PYH62_09280;Name=PYH62_09280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_09280;pseudo=true CP118825.1 Protein Homology CDS 1864113 1865216 . + 0 ID=cds-PYH62_09280;Parent=gene-PYH62_09280;Note=internal stop;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449566.1;locus_tag=PYH62_09280;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1865310 1865801 . - . ID=gene-PYH62_09285;Name=PYH62_09285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09285 CP118825.1 Protein Homology CDS 1865310 1865801 . - 0 ID=cds-WHI78965.1;Parent=gene-PYH62_09285;Dbxref=NCBI_GP:WHI78965.1;Name=WHI78965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455656.1;locus_tag=PYH62_09285;product=cupin domain-containing protein;protein_id=WHI78965.1;transl_table=11 CP118825.1 Genbank gene 1865801 1866517 . - . ID=gene-PYH62_09290;Name=PYH62_09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09290 CP118825.1 Protein Homology CDS 1865801 1866517 . - 0 ID=cds-WHI78966.1;Parent=gene-PYH62_09290;Dbxref=NCBI_GP:WHI78966.1;Name=WHI78966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499234.1;locus_tag=PYH62_09290;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WHI78966.1;transl_table=11 CP118825.1 Genbank gene 1866661 1867020 . - . ID=gene-PYH62_09295;Name=PYH62_09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09295 CP118825.1 Protein Homology CDS 1866661 1867020 . - 0 ID=cds-WHI78967.1;Parent=gene-PYH62_09295;Dbxref=NCBI_GP:WHI78967.1;Name=WHI78967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449574.1;locus_tag=PYH62_09295;product=MarR family transcriptional regulator;protein_id=WHI78967.1;transl_table=11 CP118825.1 Genbank gene 1867170 1869308 . - . ID=gene-PYH62_09300;Name=PYH62_09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09300 CP118825.1 Protein Homology CDS 1867170 1869308 . - 0 ID=cds-WHI78968.1;Parent=gene-PYH62_09300;Dbxref=NCBI_GP:WHI78968.1;Name=WHI78968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175994.1;locus_tag=PYH62_09300;product=helix-turn-helix transcriptional regulator;protein_id=WHI78968.1;transl_table=11 CP118825.1 Genbank gene 1869611 1870279 . - . ID=gene-PYH62_09305;Name=PYH62_09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09305 CP118825.1 Protein Homology CDS 1869611 1870279 . - 0 ID=cds-WHI78969.1;Parent=gene-PYH62_09305;Dbxref=NCBI_GP:WHI78969.1;Name=WHI78969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449555.1;locus_tag=PYH62_09305;product=Bax inhibitor-1 family protein;protein_id=WHI78969.1;transl_table=11 CP118825.1 Genbank gene 1870725 1871507 . + . ID=gene-PYH62_09310;Name=PYH62_09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09310 CP118825.1 Protein Homology CDS 1870725 1871507 . + 0 ID=cds-WHI78970.1;Parent=gene-PYH62_09310;Dbxref=NCBI_GP:WHI78970.1;Name=WHI78970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000731642.1;locus_tag=PYH62_09310;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WHI78970.1;transl_table=11 CP118825.1 Genbank pseudogene 1871577 1872581 . - . ID=gene-PYH62_09315;Name=PYH62_09315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_09315;pseudo=true CP118825.1 Protein Homology CDS 1871577 1872581 . - 0 ID=cds-PYH62_09315;Parent=gene-PYH62_09315;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449135.1;locus_tag=PYH62_09315;product=inorganic phosphate transporter;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1872596 1873213 . - . ID=gene-PYH62_09320;Name=PYH62_09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09320 CP118825.1 Protein Homology CDS 1872596 1873213 . - 0 ID=cds-WHI78971.1;Parent=gene-PYH62_09320;Dbxref=NCBI_GP:WHI78971.1;Name=WHI78971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499228.1;locus_tag=PYH62_09320;product=DUF47 domain-containing protein;protein_id=WHI78971.1;transl_table=11 CP118825.1 Genbank gene 1873475 1875364 . - . ID=gene-PYH62_09325;Name=PYH62_09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09325 CP118825.1 Protein Homology CDS 1873475 1875364 . - 0 ID=cds-WHI78972.1;Parent=gene-PYH62_09325;Dbxref=NCBI_GP:WHI78972.1;Name=WHI78972.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455661.1;locus_tag=PYH62_09325;product=FtsX-like permease family protein;protein_id=WHI78972.1;transl_table=11 CP118825.1 Genbank gene 1875354 1876115 . - . ID=gene-PYH62_09330;Name=PYH62_09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09330 CP118825.1 Protein Homology CDS 1875354 1876115 . - 0 ID=cds-WHI80265.1;Parent=gene-PYH62_09330;Dbxref=NCBI_GP:WHI80265.1;Name=WHI80265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000153733.1;locus_tag=PYH62_09330;product=ABC transporter ATP-binding protein;protein_id=WHI80265.1;transl_table=11 CP118825.1 Genbank gene 1876369 1877409 . - . ID=gene-PYH62_09335;Name=PYH62_09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09335 CP118825.1 Protein Homology CDS 1876369 1877409 . - 0 ID=cds-WHI78973.1;Parent=gene-PYH62_09335;Dbxref=NCBI_GP:WHI78973.1;Name=WHI78973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449136.1;locus_tag=PYH62_09335;product=sensor histidine kinase;protein_id=WHI78973.1;transl_table=11 CP118825.1 Genbank gene 1877402 1878076 . - . ID=gene-PYH62_09340;Name=graR;gbkey=Gene;gene=graR;gene_biotype=protein_coding;gene_synonym=apsR;locus_tag=PYH62_09340 CP118825.1 Protein Homology CDS 1877402 1878076 . - 0 ID=cds-WHI78974.1;Parent=gene-PYH62_09340;Dbxref=NCBI_GP:WHI78974.1;Name=WHI78974.1;gbkey=CDS;gene=graR;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499224.1;locus_tag=PYH62_09340;product=response regulator transcription factor GraR/ApsR;protein_id=WHI78974.1;transl_table=11 CP118825.1 Genbank gene 1878091 1879014 . - . ID=gene-PYH62_09345;Name=PYH62_09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09345 CP118825.1 Protein Homology CDS 1878091 1879014 . - 0 ID=cds-WHI78975.1;Parent=gene-PYH62_09345;Dbxref=NCBI_GP:WHI78975.1;Name=WHI78975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464485.1;locus_tag=PYH62_09345;product=NAD(P)H-binding protein;protein_id=WHI78975.1;transl_table=11 CP118825.1 Genbank gene 1879108 1879614 . + . ID=gene-PYH62_09350;Name=PYH62_09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09350 CP118825.1 Protein Homology CDS 1879108 1879614 . + 0 ID=cds-WHI78976.1;Parent=gene-PYH62_09350;Dbxref=NCBI_GP:WHI78976.1;Name=WHI78976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455665.1;locus_tag=PYH62_09350;product=GNAT family N-acetyltransferase;protein_id=WHI78976.1;transl_table=11 CP118825.1 Genbank gene 1879749 1880816 . - . ID=gene-PYH62_09355;Name=PYH62_09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09355 CP118825.1 Protein Homology CDS 1879749 1880816 . - 0 ID=cds-WHI78977.1;Parent=gene-PYH62_09355;Dbxref=NCBI_GP:WHI78977.1;Name=WHI78977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499218.1;locus_tag=PYH62_09355;product=hypothetical protein;protein_id=WHI78977.1;transl_table=11 CP118825.1 Genbank gene 1881085 1881588 . - . ID=gene-PYH62_09360;Name=PYH62_09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09360 CP118825.1 Protein Homology CDS 1881085 1881588 . - 0 ID=cds-WHI78978.1;Parent=gene-PYH62_09360;Dbxref=NCBI_GP:WHI78978.1;Name=WHI78978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176005.1;locus_tag=PYH62_09360;product=hypothetical protein;protein_id=WHI78978.1;transl_table=11 CP118825.1 Genbank gene 1881703 1882083 . - . ID=gene-PYH62_09365;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=PYH62_09365 CP118825.1 Protein Homology CDS 1881703 1882083 . - 0 ID=cds-WHI78979.1;Parent=gene-PYH62_09365;Dbxref=NCBI_GP:WHI78979.1;Name=WHI78979.1;Ontology_term=GO:0047324;gbkey=CDS;gene=dhaM;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176006.1;locus_tag=PYH62_09365;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WHI78979.1;transl_table=11 CP118825.1 Genbank gene 1882305 1883096 . - . ID=gene-PYH62_09370;Name=PYH62_09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09370 CP118825.1 Protein Homology CDS 1882305 1883096 . - 0 ID=cds-WHI78980.1;Parent=gene-PYH62_09370;Dbxref=NCBI_GP:WHI78980.1;Name=WHI78980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176007.1;locus_tag=PYH62_09370;product=ABC transporter ATP-binding protein;protein_id=WHI78980.1;transl_table=11 CP118825.1 Genbank gene 1883282 1884115 . - . ID=gene-PYH62_09375;Name=PYH62_09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09375 CP118825.1 Protein Homology CDS 1883282 1884115 . - 0 ID=cds-WHI78981.1;Parent=gene-PYH62_09375;Dbxref=NCBI_GP:WHI78981.1;Name=WHI78981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499210.1;locus_tag=PYH62_09375;product=YitT family protein;protein_id=WHI78981.1;transl_table=11 CP118825.1 Genbank gene 1884630 1885862 . - . ID=gene-PYH62_09380;Name=PYH62_09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09380 CP118825.1 Protein Homology CDS 1884630 1885862 . - 0 ID=cds-WHI78982.1;Parent=gene-PYH62_09380;Dbxref=NCBI_GP:WHI78982.1;Name=WHI78982.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002441322.1;locus_tag=PYH62_09380;product=nucleoside transporter C-terminal domain-containing protein;protein_id=WHI78982.1;transl_table=11 CP118825.1 Genbank gene 1886145 1888316 . - . ID=gene-PYH62_09385;Name=PYH62_09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09385 CP118825.1 Protein Homology CDS 1886145 1888316 . - 0 ID=cds-WHI78983.1;Parent=gene-PYH62_09385;Dbxref=NCBI_GP:WHI78983.1;Name=WHI78983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455669.1;locus_tag=PYH62_09385;product=bifunctional glycosyltransferase family 2 protein/CDP-glycerol:glycerophosphate glycerophosphotransferase;protein_id=WHI78983.1;transl_table=11 CP118825.1 Genbank pseudogene 1888471 1890199 . - . ID=gene-PYH62_09390;Name=PYH62_09390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_09390;pseudo=true CP118825.1 Protein Homology CDS 1888471 1890199 . - 0 ID=cds-PYH62_09390;Parent=gene-PYH62_09390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449126.1;locus_tag=PYH62_09390;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1890506 1890904 . - . ID=gene-PYH62_09395;Name=tagD;gbkey=Gene;gene=tagD;gene_biotype=protein_coding;locus_tag=PYH62_09395 CP118825.1 Protein Homology CDS 1890506 1890904 . - 0 ID=cds-WHI78984.1;Parent=gene-PYH62_09395;Dbxref=NCBI_GP:WHI78984.1;Name=WHI78984.1;Ontology_term=GO:0047348;gbkey=CDS;gene=tagD;go_function=glycerol-3-phosphate cytidylyltransferase activity|0047348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499205.1;locus_tag=PYH62_09395;product=glycerol-3-phosphate cytidylyltransferase;protein_id=WHI78984.1;transl_table=11 CP118825.1 Genbank gene 1891010 1892074 . - . ID=gene-PYH62_09400;Name=PYH62_09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09400 CP118825.1 Protein Homology CDS 1891010 1892074 . - 0 ID=cds-WHI78985.1;Parent=gene-PYH62_09400;Dbxref=NCBI_GP:WHI78985.1;Name=WHI78985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491427.1;locus_tag=PYH62_09400;product=glycosyltransferase family 2 protein;protein_id=WHI78985.1;transl_table=11 CP118825.1 Genbank gene 1892071 1893165 . - . ID=gene-PYH62_09405;Name=PYH62_09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09405 CP118825.1 Protein Homology CDS 1892071 1893165 . - 0 ID=cds-WHI78986.1;Parent=gene-PYH62_09405;Dbxref=NCBI_GP:WHI78986.1;Name=WHI78986.1;Ontology_term=GO:0047355,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=CDP-glycerol glycerophosphotransferase activity|0047355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449153.1;locus_tag=PYH62_09405;product=CDP-glycerol glycerophosphotransferase family protein;protein_id=WHI78986.1;transl_table=11 CP118825.1 Genbank gene 1893388 1894200 . - . ID=gene-PYH62_09410;Name=PYH62_09410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09410 CP118825.1 Protein Homology CDS 1893388 1894200 . - 0 ID=cds-WHI80266.1;Parent=gene-PYH62_09410;Dbxref=NCBI_GP:WHI80266.1;Name=WHI80266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273058.1;locus_tag=PYH62_09410;product=ABC transporter permease;protein_id=WHI80266.1;transl_table=11 CP118825.1 Genbank gene 1894515 1895309 . + . ID=gene-PYH62_09415;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=PYH62_09415 CP118825.1 Protein Homology CDS 1894515 1895309 . + 0 ID=cds-WHI78987.1;Parent=gene-PYH62_09415;Dbxref=NCBI_GP:WHI78987.1;Name=WHI78987.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=tagH;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499201.1;locus_tag=PYH62_09415;product=teichoic acids export ABC transporter ATP-binding subunit TagH;protein_id=WHI78987.1;transl_table=11 CP118825.1 Genbank gene 1895357 1896046 . - . ID=gene-PYH62_09420;Name=PYH62_09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09420 CP118825.1 Protein Homology CDS 1895357 1896046 . - 0 ID=cds-WHI78988.1;Parent=gene-PYH62_09420;Dbxref=NCBI_GP:WHI78988.1;Name=WHI78988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000215392.1;locus_tag=PYH62_09420;product=WecB/TagA/CpsF family glycosyltransferase;protein_id=WHI78988.1;transl_table=11 CP118825.1 Genbank gene 1896293 1897036 . + . ID=gene-PYH62_09425;Name=PYH62_09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09425 CP118825.1 Protein Homology CDS 1896293 1897036 . + 0 ID=cds-WHI78989.1;Parent=gene-PYH62_09425;Dbxref=NCBI_GP:WHI78989.1;Name=WHI78989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176018.1;locus_tag=PYH62_09425;product=M50 family metallopeptidase;protein_id=WHI78989.1;transl_table=11 CP118825.1 Genbank gene 1897078 1897725 . - . ID=gene-PYH62_09430;Name=PYH62_09430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09430 CP118825.1 Protein Homology CDS 1897078 1897725 . - 0 ID=cds-WHI78990.1;Parent=gene-PYH62_09430;Dbxref=NCBI_GP:WHI78990.1;Name=WHI78990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176019.1;locus_tag=PYH62_09430;product=metal-dependent transcriptional regulator;protein_id=WHI78990.1;transl_table=11 CP118825.1 Genbank gene 1897908 1899947 . - . ID=gene-PYH62_09435;Name=PYH62_09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09435 CP118825.1 Protein Homology CDS 1897908 1899947 . - 0 ID=cds-WHI78991.1;Parent=gene-PYH62_09435;Dbxref=NCBI_GP:WHI78991.1;Name=WHI78991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449154.1;locus_tag=PYH62_09435;product=sodium:proton antiporter;protein_id=WHI78991.1;transl_table=11 CP118825.1 Genbank gene 1900141 1900641 . - . ID=gene-PYH62_09440;Name=PYH62_09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09440 CP118825.1 Protein Homology CDS 1900141 1900641 . - 0 ID=cds-WHI78992.1;Parent=gene-PYH62_09440;Dbxref=NCBI_GP:WHI78992.1;Name=WHI78992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176021.1;locus_tag=PYH62_09440;product=Na+/H+ antiporter subunit G;protein_id=WHI78992.1;transl_table=11 CP118825.1 Genbank gene 1900616 1900918 . - . ID=gene-PYH62_09445;Name=mnhF2;gbkey=Gene;gene=mnhF2;gene_biotype=protein_coding;locus_tag=PYH62_09445 CP118825.1 Protein Homology CDS 1900616 1900918 . - 0 ID=cds-WHI78993.1;Parent=gene-PYH62_09445;Dbxref=NCBI_GP:WHI78993.1;Name=WHI78993.1;gbkey=CDS;gene=mnhF2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276529.1;locus_tag=PYH62_09445;product=Na+/H+ antiporter Mnh2 subunit F;protein_id=WHI78993.1;transl_table=11 CP118825.1 Genbank gene 1900915 1901397 . - . ID=gene-PYH62_09450;Name=mnhE2;gbkey=Gene;gene=mnhE2;gene_biotype=protein_coding;locus_tag=PYH62_09450 CP118825.1 Protein Homology CDS 1900915 1901397 . - 0 ID=cds-WHI78994.1;Parent=gene-PYH62_09450;Dbxref=NCBI_GP:WHI78994.1;Name=WHI78994.1;gbkey=CDS;gene=mnhE2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499191.1;locus_tag=PYH62_09450;product=Na+/H+ antiporter Mnh2 subunit E;protein_id=WHI78994.1;transl_table=11 CP118825.1 Genbank pseudogene 1901394 1902894 . - . ID=gene-PYH62_09455;Name=mnhD2;gbkey=Gene;gene=mnhD2;gene_biotype=pseudogene;locus_tag=PYH62_09455;pseudo=true CP118825.1 Protein Homology CDS 1901394 1902894 . - 0 ID=cds-PYH62_09455;Parent=gene-PYH62_09455;Note=frameshifted;gbkey=CDS;gene=mnhD2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276531.1;locus_tag=PYH62_09455;product=Na+/H+ antiporter Mnh2 subunit D;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1902884 1903231 . - . ID=gene-PYH62_09460;Name=mnhC2;gbkey=Gene;gene=mnhC2;gene_biotype=protein_coding;locus_tag=PYH62_09460 CP118825.1 Protein Homology CDS 1902884 1903231 . - 0 ID=cds-WHI78995.1;Parent=gene-PYH62_09460;Dbxref=NCBI_GP:WHI78995.1;Name=WHI78995.1;gbkey=CDS;gene=mnhC2;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276532.1;locus_tag=PYH62_09460;product=Na+/H+ antiporter Mnh2 subunit C;protein_id=WHI78995.1;transl_table=11 CP118825.1 Genbank gene 1903228 1903653 . - . ID=gene-PYH62_09465;Name=mnhB2;gbkey=Gene;gene=mnhB2;gene_biotype=protein_coding;locus_tag=PYH62_09465 CP118825.1 Protein Homology CDS 1903228 1903653 . - 0 ID=cds-WHI78996.1;Parent=gene-PYH62_09465;Dbxref=NCBI_GP:WHI78996.1;Name=WHI78996.1;gbkey=CDS;gene=mnhB2;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499188.1;locus_tag=PYH62_09465;product=Na+/H+ antiporter Mnh2 subunit B;protein_id=WHI78996.1;transl_table=11 CP118825.1 Genbank gene 1903640 1906042 . - . ID=gene-PYH62_09470;Name=PYH62_09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09470 CP118825.1 Protein Homology CDS 1903640 1906042 . - 0 ID=cds-WHI78997.1;Parent=gene-PYH62_09470;Dbxref=NCBI_GP:WHI78997.1;Name=WHI78997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276534.1;locus_tag=PYH62_09470;product=DUF4040 family protein;protein_id=WHI78997.1;transl_table=11 CP118825.1 Genbank gene 1906057 1906614 . - . ID=gene-PYH62_09475;Name=PYH62_09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09475 CP118825.1 Protein Homology CDS 1906057 1906614 . - 0 ID=cds-WHI78998.1;Parent=gene-PYH62_09475;Dbxref=NCBI_GP:WHI78998.1;Name=WHI78998.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448908.1;locus_tag=PYH62_09475;product=tyrosine-type recombinase/integrase;protein_id=WHI78998.1;transl_table=11 CP118825.1 Genbank gene 1906757 1906963 . + . ID=gene-PYH62_09480;Name=PYH62_09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09480 CP118825.1 Protein Homology CDS 1906757 1906963 . + 0 ID=cds-WHI78999.1;Parent=gene-PYH62_09480;Dbxref=NCBI_GP:WHI78999.1;Name=WHI78999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448893.1;locus_tag=PYH62_09480;product=hypothetical protein;protein_id=WHI78999.1;transl_table=11 CP118825.1 Genbank gene 1906996 1907217 . + . ID=gene-PYH62_09485;Name=PYH62_09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09485 CP118825.1 Protein Homology CDS 1906996 1907217 . + 0 ID=cds-WHI79000.1;Parent=gene-PYH62_09485;Dbxref=NCBI_GP:WHI79000.1;Name=WHI79000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834895.1;locus_tag=PYH62_09485;product=DUF2922 domain-containing protein;protein_id=WHI79000.1;transl_table=11 CP118825.1 Genbank gene 1907398 1908324 . + . ID=gene-PYH62_09490;Name=PYH62_09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09490 CP118825.1 Protein Homology CDS 1907398 1908324 . + 0 ID=cds-WHI79001.1;Parent=gene-PYH62_09490;Dbxref=NCBI_GP:WHI79001.1;Name=WHI79001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474409.1;locus_tag=PYH62_09490;product=DMT family transporter;protein_id=WHI79001.1;transl_table=11 CP118825.1 Genbank gene 1908595 1909410 . + . ID=gene-PYH62_09495;Name=PYH62_09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09495 CP118825.1 Protein Homology CDS 1908595 1909410 . + 0 ID=cds-WHI79002.1;Parent=gene-PYH62_09495;Dbxref=NCBI_GP:WHI79002.1;Name=WHI79002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176029.1;locus_tag=PYH62_09495;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WHI79002.1;transl_table=11 CP118825.1 Genbank gene 1909726 1910100 . + . ID=gene-PYH62_09500;Name=sarA;gbkey=Gene;gene=sarA;gene_biotype=protein_coding;locus_tag=PYH62_09500 CP118825.1 Protein Homology CDS 1909726 1910100 . + 0 ID=cds-WHI79003.1;Parent=gene-PYH62_09500;Dbxref=NCBI_GP:WHI79003.1;Name=WHI79003.1;gbkey=CDS;gene=sarA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499183.1;locus_tag=PYH62_09500;product=global transcriptional regulator SarA;protein_id=WHI79003.1;transl_table=11 CP118825.1 Genbank gene 1910347 1911162 . - . ID=gene-PYH62_09505;Name=PYH62_09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09505 CP118825.1 Protein Homology CDS 1910347 1911162 . - 0 ID=cds-WHI79004.1;Parent=gene-PYH62_09505;Dbxref=NCBI_GP:WHI79004.1;Name=WHI79004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448923.1;locus_tag=PYH62_09505;product=alpha/beta hydrolase;protein_id=WHI79004.1;transl_table=11 CP118825.1 Genbank gene 1911321 1912037 . - . ID=gene-PYH62_09510;Name=PYH62_09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09510 CP118825.1 Protein Homology CDS 1911321 1912037 . - 0 ID=cds-WHI79005.1;Parent=gene-PYH62_09510;Dbxref=NCBI_GP:WHI79005.1;Name=WHI79005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001666742.1;locus_tag=PYH62_09510;product=hypothetical protein;protein_id=WHI79005.1;transl_table=11 CP118825.1 Genbank gene 1912243 1912749 . - . ID=gene-PYH62_09515;Name=PYH62_09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09515 CP118825.1 Protein Homology CDS 1912243 1912749 . - 0 ID=cds-WHI79006.1;Parent=gene-PYH62_09515;Dbxref=NCBI_GP:WHI79006.1;Name=WHI79006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491441.1;locus_tag=PYH62_09515;product=hypothetical protein;protein_id=WHI79006.1;transl_table=11 CP118825.1 Genbank gene 1912882 1913676 . - . ID=gene-PYH62_09520;Name=PYH62_09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09520 CP118825.1 Protein Homology CDS 1912882 1913676 . - 0 ID=cds-WHI79007.1;Parent=gene-PYH62_09520;Dbxref=NCBI_GP:WHI79007.1;Name=WHI79007.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488592.1;locus_tag=PYH62_09520;product=alpha/beta hydrolase;protein_id=WHI79007.1;transl_table=11 CP118825.1 Genbank gene 1913677 1914381 . - . ID=gene-PYH62_09525;Name=PYH62_09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09525 CP118825.1 Protein Homology CDS 1913677 1914381 . - 0 ID=cds-WHI79008.1;Parent=gene-PYH62_09525;Dbxref=NCBI_GP:WHI79008.1;Name=WHI79008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455680.1;locus_tag=PYH62_09525;product=HAD family hydrolase;protein_id=WHI79008.1;transl_table=11 CP118825.1 Genbank gene 1914440 1915396 . - . ID=gene-PYH62_09530;Name=PYH62_09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09530 CP118825.1 Protein Homology CDS 1914440 1915396 . - 0 ID=cds-WHI79009.1;Parent=gene-PYH62_09530;Dbxref=NCBI_GP:WHI79009.1;Name=WHI79009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176035.1;locus_tag=PYH62_09530;product=iron ABC transporter permease;protein_id=WHI79009.1;transl_table=11 CP118825.1 Genbank gene 1915587 1916507 . - . ID=gene-PYH62_09535;Name=PYH62_09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09535 CP118825.1 Protein Homology CDS 1915587 1916507 . - 0 ID=cds-WHI79010.1;Parent=gene-PYH62_09535;Dbxref=NCBI_GP:WHI79010.1;Name=WHI79010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176036.1;locus_tag=PYH62_09535;product=ABC transporter substrate-binding protein;protein_id=WHI79010.1;transl_table=11 CP118825.1 Genbank gene 1916710 1917213 . - . ID=gene-PYH62_09540;Name=PYH62_09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09540 CP118825.1 Protein Homology CDS 1916710 1917213 . - 0 ID=cds-WHI79011.1;Parent=gene-PYH62_09540;Dbxref=NCBI_GP:WHI79011.1;Name=WHI79011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448905.1;locus_tag=PYH62_09540;product=DUF805 domain-containing protein;protein_id=WHI79011.1;transl_table=11 CP118825.1 Genbank gene 1917289 1918050 . - . ID=gene-PYH62_09545;Name=PYH62_09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09545 CP118825.1 Protein Homology CDS 1917289 1918050 . - 0 ID=cds-WHI79012.1;Parent=gene-PYH62_09545;Dbxref=NCBI_GP:WHI79012.1;Name=WHI79012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834888.1;locus_tag=PYH62_09545;product=MerR family transcriptional regulator;protein_id=WHI79012.1;transl_table=11 CP118825.1 Genbank gene 1918141 1918788 . - . ID=gene-PYH62_09550;Name=PYH62_09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09550 CP118825.1 Protein Homology CDS 1918141 1918788 . - 0 ID=cds-WHI79013.1;Parent=gene-PYH62_09550;Dbxref=NCBI_GP:WHI79013.1;Name=WHI79013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176039.1;locus_tag=PYH62_09550;product=endonuclease III domain-containing protein;protein_id=WHI79013.1;transl_table=11 CP118825.1 Genbank gene 1918869 1920530 . - . ID=gene-PYH62_09555;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=PYH62_09555 CP118825.1 Protein Homology CDS 1918869 1920530 . - 0 ID=cds-WHI79014.1;Parent=gene-PYH62_09555;Dbxref=NCBI_GP:WHI79014.1;Name=WHI79014.1;Ontology_term=GO:0006420,GO:0004814,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499174.1;locus_tag=PYH62_09555;product=arginine--tRNA ligase;protein_id=WHI79014.1;transl_table=11 CP118825.1 Genbank gene 1920527 1920943 . - . ID=gene-PYH62_09560;Name=PYH62_09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09560 CP118825.1 Protein Homology CDS 1920527 1920943 . - 0 ID=cds-WHI79015.1;Parent=gene-PYH62_09560;Dbxref=NCBI_GP:WHI79015.1;Name=WHI79015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000359087.1;locus_tag=PYH62_09560;product=DUF1934 family protein;protein_id=WHI79015.1;transl_table=11 CP118825.1 Genbank gene 1921313 1921453 . - . ID=gene-PYH62_09565;Name=PYH62_09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09565 CP118825.1 Protein Homology CDS 1921313 1921453 . - 0 ID=cds-WHI79016.1;Parent=gene-PYH62_09565;Dbxref=NCBI_GP:WHI79016.1;Name=WHI79016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448878.1;locus_tag=PYH62_09565;product=hypothetical protein;protein_id=WHI79016.1;transl_table=11 CP118825.1 Genbank gene 1922000 1922521 . - . ID=gene-PYH62_09570;Name=PYH62_09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09570 CP118825.1 Protein Homology CDS 1922000 1922521 . - 0 ID=cds-WHI80267.1;Parent=gene-PYH62_09570;Dbxref=NCBI_GP:WHI80267.1;Name=WHI80267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499170.1;locus_tag=PYH62_09570;product=YwhD family protein;protein_id=WHI80267.1;transl_table=11 CP118825.1 Genbank gene 1922579 1923883 . - . ID=gene-PYH62_09575;Name=PYH62_09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09575 CP118825.1 Protein Homology CDS 1922579 1923883 . - 0 ID=cds-WHI79017.1;Parent=gene-PYH62_09575;Dbxref=NCBI_GP:WHI79017.1;Name=WHI79017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479424.1;locus_tag=PYH62_09575;product=HD domain-containing protein;protein_id=WHI79017.1;transl_table=11 CP118825.1 Genbank gene 1923941 1924417 . - . ID=gene-PYH62_09580;Name=PYH62_09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09580 CP118825.1 Protein Homology CDS 1923941 1924417 . - 0 ID=cds-WHI79018.1;Parent=gene-PYH62_09580;Dbxref=NCBI_GP:WHI79018.1;Name=WHI79018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488589.1;locus_tag=PYH62_09580;product=GNAT family N-acetyltransferase;protein_id=WHI79018.1;transl_table=11 CP118825.1 Genbank gene 1924512 1925048 . - . ID=gene-PYH62_09585;Name=PYH62_09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09585 CP118825.1 Protein Homology CDS 1924512 1925048 . - 0 ID=cds-WHI79019.1;Parent=gene-PYH62_09585;Dbxref=NCBI_GP:WHI79019.1;Name=WHI79019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176045.1;locus_tag=PYH62_09585;product=flavodoxin family protein;protein_id=WHI79019.1;transl_table=11 CP118825.1 Genbank gene 1925197 1926132 . - . ID=gene-PYH62_09590;Name=PYH62_09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09590 CP118825.1 Protein Homology CDS 1925197 1926132 . - 0 ID=cds-WHI79020.1;Parent=gene-PYH62_09590;Dbxref=NCBI_GP:WHI79020.1;Name=WHI79020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488560.1;locus_tag=PYH62_09590;product=aldo/keto reductase;protein_id=WHI79020.1;transl_table=11 CP118825.1 Genbank gene 1926289 1926729 . + . ID=gene-PYH62_09595;Name=PYH62_09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09595 CP118825.1 Protein Homology CDS 1926289 1926729 . + 0 ID=cds-WHI79021.1;Parent=gene-PYH62_09595;Dbxref=NCBI_GP:WHI79021.1;Name=WHI79021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006189740.1;locus_tag=PYH62_09595;product=Rrf2 family transcriptional regulator;protein_id=WHI79021.1;transl_table=11 CP118825.1 Genbank pseudogene 1926716 1926853 . + . ID=gene-PYH62_09600;Name=PYH62_09600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_09600;pseudo=true CP118825.1 Protein Homology CDS 1926716 1926853 . + 0 ID=cds-PYH62_09600;Parent=gene-PYH62_09600;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000860577.1;locus_tag=PYH62_09600;product=dihydrolipoamide dehydrogenase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1927102 1928583 . - . ID=gene-PYH62_09605;Name=PYH62_09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09605 CP118825.1 Protein Homology CDS 1927102 1928583 . - 0 ID=cds-WHI79022.1;Parent=gene-PYH62_09605;Dbxref=NCBI_GP:WHI79022.1;Name=WHI79022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002468159.1;locus_tag=PYH62_09605;product=SH3 domain-containing protein;protein_id=WHI79022.1;transl_table=11 CP118825.1 Genbank gene 1928561 1929046 . - . ID=gene-PYH62_09610;Name=PYH62_09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09610 CP118825.1 Protein Homology CDS 1928561 1929046 . - 0 ID=cds-WHI79023.1;Parent=gene-PYH62_09610;Dbxref=NCBI_GP:WHI79023.1;Name=WHI79023.1;Ontology_term=GO:0140911;gbkey=CDS;go_function=pore-forming activity|0140911||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835341.1;locus_tag=PYH62_09610;product=phage holin;protein_id=WHI79023.1;transl_table=11 CP118825.1 Genbank gene 1929102 1929245 . - . ID=gene-PYH62_09615;Name=PYH62_09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09615 CP118825.1 Protein Homology CDS 1929102 1929245 . - 0 ID=cds-WHI79024.1;Parent=gene-PYH62_09615;Dbxref=NCBI_GP:WHI79024.1;Name=WHI79024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016064909.1;locus_tag=PYH62_09615;product=XkdX family protein;protein_id=WHI79024.1;transl_table=11 CP118825.1 Genbank gene 1929238 1929582 . - . ID=gene-PYH62_09620;Name=PYH62_09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09620 CP118825.1 Protein Homology CDS 1929238 1929582 . - 0 ID=cds-WHI79025.1;Parent=gene-PYH62_09620;Dbxref=NCBI_GP:WHI79025.1;Name=WHI79025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456912.1;locus_tag=PYH62_09620;product=hypothetical protein;protein_id=WHI79025.1;transl_table=11 CP118825.1 Genbank gene 1929596 1930942 . - . ID=gene-PYH62_09625;Name=PYH62_09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09625 CP118825.1 Protein Homology CDS 1929596 1930942 . - 0 ID=cds-WHI79026.1;Parent=gene-PYH62_09625;Dbxref=NCBI_GP:WHI79026.1;Name=WHI79026.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022117.2;locus_tag=PYH62_09625;product=BppU family phage baseplate upper protein;protein_id=WHI79026.1;transl_table=11 CP118825.1 Genbank gene 1930995 1932920 . - . ID=gene-PYH62_09630;Name=PYH62_09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09630 CP118825.1 Protein Homology CDS 1930995 1932920 . - 0 ID=cds-WHI79027.1;Parent=gene-PYH62_09630;Dbxref=NCBI_GP:WHI79027.1;Name=WHI79027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175541.1;locus_tag=PYH62_09630;product=glucosaminidase domain-containing protein;protein_id=WHI79027.1;transl_table=11 CP118825.1 Genbank gene 1932974 1933360 . - . ID=gene-PYH62_09635;Name=PYH62_09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09635 CP118825.1 GeneMarkS-2+ CDS 1932974 1933360 . - 0 ID=cds-WHI79028.1;Parent=gene-PYH62_09635;Dbxref=NCBI_GP:WHI79028.1;Name=WHI79028.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_09635;product=hypothetical protein;protein_id=WHI79028.1;transl_table=11 CP118825.1 Genbank gene 1933344 1933763 . - . ID=gene-PYH62_09640;Name=PYH62_09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09640 CP118825.1 Protein Homology CDS 1933344 1933763 . - 0 ID=cds-WHI79029.1;Parent=gene-PYH62_09640;Dbxref=NCBI_GP:WHI79029.1;Name=WHI79029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019168066.1;locus_tag=PYH62_09640;product=hypothetical protein;protein_id=WHI79029.1;transl_table=11 CP118825.1 Genbank gene 1933784 1934980 . - . ID=gene-PYH62_09645;Name=PYH62_09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09645 CP118825.1 Protein Homology CDS 1933784 1934980 . - 0 ID=cds-WHI79030.1;Parent=gene-PYH62_09645;Dbxref=NCBI_GP:WHI79030.1;Name=WHI79030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835334.1;locus_tag=PYH62_09645;product=BppU family phage baseplate upper protein;protein_id=WHI79030.1;transl_table=11 CP118825.1 Genbank gene 1934993 1936867 . - . ID=gene-PYH62_09650;Name=PYH62_09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09650 CP118825.1 Protein Homology CDS 1934993 1936867 . - 0 ID=cds-WHI79031.1;Parent=gene-PYH62_09650;Dbxref=NCBI_GP:WHI79031.1;Name=WHI79031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016064904.1;locus_tag=PYH62_09650;product=M14 family metallopeptidase;protein_id=WHI79031.1;transl_table=11 CP118825.1 Genbank gene 1936878 1938128 . - . ID=gene-PYH62_09655;Name=PYH62_09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09655 CP118825.1 Protein Homology CDS 1936878 1938128 . - 0 ID=cds-WHI79032.1;Parent=gene-PYH62_09655;Dbxref=NCBI_GP:WHI79032.1;Name=WHI79032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002500207.1;locus_tag=PYH62_09655;product=phage tail protein;protein_id=WHI79032.1;transl_table=11 CP118825.1 Genbank gene 1938138 1939094 . - . ID=gene-PYH62_09660;Name=PYH62_09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09660 CP118825.1 Protein Homology CDS 1938138 1939094 . - 0 ID=cds-WHI79033.1;Parent=gene-PYH62_09660;Dbxref=NCBI_GP:WHI79033.1;Name=WHI79033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835331.1;locus_tag=PYH62_09660;product=phage tail family protein;protein_id=WHI79033.1;transl_table=11 CP118825.1 Genbank pseudogene 1939107 1942501 . - . ID=gene-PYH62_09665;Name=PYH62_09665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_09665;pseudo=true CP118825.1 Protein Homology CDS 1939107 1942501 . - 0 ID=cds-PYH62_09665;Parent=gene-PYH62_09665;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016064901.1;locus_tag=PYH62_09665;product=hypothetical protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1942501 1942866 . - . ID=gene-PYH62_09670;Name=PYH62_09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09670 CP118825.1 Protein Homology CDS 1942501 1942866 . - 0 ID=cds-WHI79034.1;Parent=gene-PYH62_09670;Dbxref=NCBI_GP:WHI79034.1;Name=WHI79034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016064900.1;locus_tag=PYH62_09670;product=hypothetical protein;protein_id=WHI79034.1;transl_table=11 CP118825.1 Genbank gene 1942896 1943267 . - . ID=gene-PYH62_09675;Name=PYH62_09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09675 CP118825.1 Protein Homology CDS 1942896 1943267 . - 0 ID=cds-WHI79035.1;Parent=gene-PYH62_09675;Dbxref=NCBI_GP:WHI79035.1;Name=WHI79035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016064899.1;locus_tag=PYH62_09675;product=tail assembly chaperone;protein_id=WHI79035.1;transl_table=11 CP118825.1 Genbank gene 1943336 1943932 . - . ID=gene-PYH62_09680;Name=PYH62_09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09680 CP118825.1 Protein Homology CDS 1943336 1943932 . - 0 ID=cds-WHI79036.1;Parent=gene-PYH62_09680;Dbxref=NCBI_GP:WHI79036.1;Name=WHI79036.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835328.1;locus_tag=PYH62_09680;product=phage major tail protein%2C TP901-1 family;protein_id=WHI79036.1;transl_table=11 CP118825.1 Genbank gene 1943944 1944339 . - . ID=gene-PYH62_09685;Name=PYH62_09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09685 CP118825.1 Protein Homology CDS 1943944 1944339 . - 0 ID=cds-WHI79037.1;Parent=gene-PYH62_09685;Dbxref=NCBI_GP:WHI79037.1;Name=WHI79037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835327.1;locus_tag=PYH62_09685;product=hypothetical protein;protein_id=WHI79037.1;transl_table=11 CP118825.1 Genbank gene 1944350 1944700 . - . ID=gene-PYH62_09690;Name=PYH62_09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09690 CP118825.1 Protein Homology CDS 1944350 1944700 . - 0 ID=cds-WHI79038.1;Parent=gene-PYH62_09690;Dbxref=NCBI_GP:WHI79038.1;Name=WHI79038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016064896.1;locus_tag=PYH62_09690;product=HK97 gp10 family phage protein;protein_id=WHI79038.1;transl_table=11 CP118825.1 Genbank gene 1944690 1945004 . - . ID=gene-PYH62_09695;Name=PYH62_09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09695 CP118825.1 Protein Homology CDS 1944690 1945004 . - 0 ID=cds-WHI79039.1;Parent=gene-PYH62_09695;Dbxref=NCBI_GP:WHI79039.1;Name=WHI79039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016064895.1;locus_tag=PYH62_09695;product=hypothetical protein;protein_id=WHI79039.1;transl_table=11 CP118825.1 Genbank gene 1945001 1945336 . - . ID=gene-PYH62_09700;Name=PYH62_09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09700 CP118825.1 Protein Homology CDS 1945001 1945336 . - 0 ID=cds-WHI79040.1;Parent=gene-PYH62_09700;Dbxref=NCBI_GP:WHI79040.1;Name=WHI79040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835325.1;locus_tag=PYH62_09700;product=phage head-tail connector protein;protein_id=WHI79040.1;transl_table=11 CP118825.1 Genbank gene 1945357 1946268 . - . ID=gene-PYH62_09705;Name=PYH62_09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09705 CP118825.1 Protein Homology CDS 1945357 1946268 . - 0 ID=cds-WHI79041.1;Parent=gene-PYH62_09705;Dbxref=NCBI_GP:WHI79041.1;Name=WHI79041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835324.1;locus_tag=PYH62_09705;product=capsid protein;protein_id=WHI79041.1;transl_table=11 CP118825.1 Genbank gene 1946284 1946874 . - . ID=gene-PYH62_09710;Name=PYH62_09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09710 CP118825.1 Protein Homology CDS 1946284 1946874 . - 0 ID=cds-WHI79042.1;Parent=gene-PYH62_09710;Dbxref=NCBI_GP:WHI79042.1;Name=WHI79042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175555.1;locus_tag=PYH62_09710;product=DUF4355 domain-containing protein;protein_id=WHI79042.1;transl_table=11 CP118825.1 Genbank gene 1946983 1947162 . - . ID=gene-PYH62_09715;Name=PYH62_09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09715 CP118825.1 GeneMarkS-2+ CDS 1946983 1947162 . - 0 ID=cds-WHI79043.1;Parent=gene-PYH62_09715;Dbxref=NCBI_GP:WHI79043.1;Name=WHI79043.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_09715;product=hypothetical protein;protein_id=WHI79043.1;transl_table=11 CP118825.1 Genbank gene 1947174 1948214 . - . ID=gene-PYH62_09720;Name=PYH62_09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09720 CP118825.1 Protein Homology CDS 1947174 1948214 . - 0 ID=cds-WHI79044.1;Parent=gene-PYH62_09720;Dbxref=NCBI_GP:WHI79044.1;Name=WHI79044.1;Ontology_term=GO:0016032,GO:0019068,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_process=viral process|0016032||IEA,virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835321.1;locus_tag=PYH62_09720;product=minor capsid protein;protein_id=WHI79044.1;transl_table=11 CP118825.1 Genbank gene 1948198 1949649 . - . ID=gene-PYH62_09725;Name=PYH62_09725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09725 CP118825.1 Protein Homology CDS 1948198 1949649 . - 0 ID=cds-WHI79045.1;Parent=gene-PYH62_09725;Dbxref=NCBI_GP:WHI79045.1;Name=WHI79045.1;Ontology_term=GO:0051027,GO:0005198,GO:0046798;gbkey=CDS;go_component=viral portal complex|0046798||IEA;go_function=structural molecule activity|0005198||IEA;go_process=DNA transport|0051027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016064890.1;locus_tag=PYH62_09725;product=phage portal protein;protein_id=WHI79045.1;transl_table=11 CP118825.1 Genbank gene 1949650 1950939 . - . ID=gene-PYH62_09730;Name=PYH62_09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09730 CP118825.1 Protein Homology CDS 1949650 1950939 . - 0 ID=cds-WHI79046.1;Parent=gene-PYH62_09730;Dbxref=NCBI_GP:WHI79046.1;Name=WHI79046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835319.1;locus_tag=PYH62_09730;product=PBSX family phage terminase large subunit;protein_id=WHI79046.1;transl_table=11 CP118825.1 Genbank gene 1950942 1951367 . - . ID=gene-PYH62_09735;Name=PYH62_09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09735 CP118825.1 Protein Homology CDS 1950942 1951367 . - 0 ID=cds-WHI80268.1;Parent=gene-PYH62_09735;Dbxref=NCBI_GP:WHI80268.1;Name=WHI80268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016064888.1;locus_tag=PYH62_09735;product=terminase small subunit;protein_id=WHI80268.1;transl_table=11 CP118825.1 Genbank gene 1951599 1952006 . - . ID=gene-PYH62_09740;Name=PYH62_09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09740 CP118825.1 Protein Homology CDS 1951599 1952006 . - 0 ID=cds-WHI79047.1;Parent=gene-PYH62_09740;Dbxref=NCBI_GP:WHI79047.1;Name=WHI79047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016064886.1;locus_tag=PYH62_09740;product=sigma-70 family RNA polymerase sigma factor;protein_id=WHI79047.1;transl_table=11 CP118825.1 Genbank gene 1952006 1952503 . - . ID=gene-PYH62_09745;Name=PYH62_09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09745 CP118825.1 Protein Homology CDS 1952006 1952503 . - 0 ID=cds-WHI79048.1;Parent=gene-PYH62_09745;Dbxref=NCBI_GP:WHI79048.1;Name=WHI79048.1;Ontology_term=GO:0006281;gbkey=CDS;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835316.1;locus_tag=PYH62_09745;product=Holliday junction resolvase RecU;protein_id=WHI79048.1;transl_table=11 CP118825.1 Genbank gene 1952574 1953017 . - . ID=gene-PYH62_09750;Name=PYH62_09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09750 CP118825.1 Protein Homology CDS 1952574 1953017 . - 0 ID=cds-WHI79049.1;Parent=gene-PYH62_09750;Dbxref=NCBI_GP:WHI79049.1;Name=WHI79049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017465045.1;locus_tag=PYH62_09750;product=hypothetical protein;protein_id=WHI79049.1;transl_table=11 CP118825.1 Genbank gene 1953017 1953184 . - . ID=gene-PYH62_09755;Name=PYH62_09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09755 CP118825.1 Protein Homology CDS 1953017 1953184 . - 0 ID=cds-WHI79050.1;Parent=gene-PYH62_09755;Dbxref=NCBI_GP:WHI79050.1;Name=WHI79050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015978161.1;locus_tag=PYH62_09755;product=transcriptional regulator;protein_id=WHI79050.1;transl_table=11 CP118825.1 Genbank gene 1953177 1953455 . - . ID=gene-PYH62_09760;Name=PYH62_09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09760 CP118825.1 Protein Homology CDS 1953177 1953455 . - 0 ID=cds-WHI79051.1;Parent=gene-PYH62_09760;Dbxref=NCBI_GP:WHI79051.1;Name=WHI79051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002504778.1;locus_tag=PYH62_09760;product=hypothetical protein;protein_id=WHI79051.1;transl_table=11 CP118825.1 Genbank gene 1953461 1953706 . - . ID=gene-PYH62_09765;Name=PYH62_09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09765 CP118825.1 Protein Homology CDS 1953461 1953706 . - 0 ID=cds-WHI79052.1;Parent=gene-PYH62_09765;Dbxref=NCBI_GP:WHI79052.1;Name=WHI79052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000998180.1;locus_tag=PYH62_09765;product=hypothetical protein;protein_id=WHI79052.1;transl_table=11 CP118825.1 Genbank gene 1953756 1954307 . - . ID=gene-PYH62_09770;Name=PYH62_09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09770 CP118825.1 Protein Homology CDS 1953756 1954307 . - 0 ID=cds-WHI79053.1;Parent=gene-PYH62_09770;Dbxref=NCBI_GP:WHI79053.1;Name=WHI79053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002497096.1;locus_tag=PYH62_09770;product=dUTP pyrophosphatase;protein_id=WHI79053.1;transl_table=11 CP118825.1 Genbank gene 1954308 1954493 . - . ID=gene-PYH62_09775;Name=PYH62_09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09775 CP118825.1 GeneMarkS-2+ CDS 1954308 1954493 . - 0 ID=cds-WHI79054.1;Parent=gene-PYH62_09775;Dbxref=NCBI_GP:WHI79054.1;Name=WHI79054.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_09775;product=hypothetical protein;protein_id=WHI79054.1;transl_table=11 CP118825.1 Genbank gene 1954480 1954791 . - . ID=gene-PYH62_09780;Name=PYH62_09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09780 CP118825.1 GeneMarkS-2+ CDS 1954480 1954791 . - 0 ID=cds-WHI79055.1;Parent=gene-PYH62_09780;Dbxref=NCBI_GP:WHI79055.1;Name=WHI79055.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_09780;product=hypothetical protein;protein_id=WHI79055.1;transl_table=11 CP118825.1 Genbank gene 1954772 1954990 . - . ID=gene-PYH62_09785;Name=PYH62_09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09785 CP118825.1 GeneMarkS-2+ CDS 1954772 1954990 . - 0 ID=cds-WHI79056.1;Parent=gene-PYH62_09785;Dbxref=NCBI_GP:WHI79056.1;Name=WHI79056.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_09785;product=hypothetical protein;protein_id=WHI79056.1;transl_table=11 CP118825.1 Genbank gene 1954983 1955348 . - . ID=gene-PYH62_09790;Name=PYH62_09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09790 CP118825.1 GeneMarkS-2+ CDS 1954983 1955348 . - 0 ID=cds-WHI79057.1;Parent=gene-PYH62_09790;Dbxref=NCBI_GP:WHI79057.1;Name=WHI79057.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_09790;product=hypothetical protein;protein_id=WHI79057.1;transl_table=11 CP118825.1 Genbank gene 1955351 1955575 . - . ID=gene-PYH62_09795;Name=PYH62_09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09795 CP118825.1 Protein Homology CDS 1955351 1955575 . - 0 ID=cds-WHI79058.1;Parent=gene-PYH62_09795;Dbxref=NCBI_GP:WHI79058.1;Name=WHI79058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016064880.1;locus_tag=PYH62_09795;product=hypothetical protein;protein_id=WHI79058.1;transl_table=11 CP118825.1 Genbank gene 1955568 1956464 . - . ID=gene-PYH62_09800;Name=PYH62_09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09800 CP118825.1 Protein Homology CDS 1955568 1956464 . - 0 ID=cds-WHI79059.1;Parent=gene-PYH62_09800;Dbxref=NCBI_GP:WHI79059.1;Name=WHI79059.1;Ontology_term=GO:0006269;gbkey=CDS;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016064879.1;locus_tag=PYH62_09800;product=DnaD domain protein;protein_id=WHI79059.1;transl_table=11 CP118825.1 Genbank gene 1956499 1956696 . - . ID=gene-PYH62_09805;Name=PYH62_09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09805 CP118825.1 Protein Homology CDS 1956499 1956696 . - 0 ID=cds-WHI79060.1;Parent=gene-PYH62_09805;Dbxref=NCBI_GP:WHI79060.1;Name=WHI79060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464436.1;locus_tag=PYH62_09805;product=helix-turn-helix transcriptional regulator;protein_id=WHI79060.1;transl_table=11 CP118825.1 Genbank gene 1956693 1956896 . - . ID=gene-PYH62_09810;Name=PYH62_09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09810 CP118825.1 Protein Homology CDS 1956693 1956896 . - 0 ID=cds-WHI79061.1;Parent=gene-PYH62_09810;Dbxref=NCBI_GP:WHI79061.1;Name=WHI79061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017464435.1;locus_tag=PYH62_09810;product=helix-turn-helix transcriptional regulator;protein_id=WHI79061.1;transl_table=11 CP118825.1 Genbank gene 1956911 1957375 . - . ID=gene-PYH62_09815;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=PYH62_09815 CP118825.1 Protein Homology CDS 1956911 1957375 . - 0 ID=cds-WHI79062.1;Parent=gene-PYH62_09815;Dbxref=NCBI_GP:WHI79062.1;Name=WHI79062.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498938.1;locus_tag=PYH62_09815;product=single-stranded DNA-binding protein;protein_id=WHI79062.1;transl_table=11 CP118825.1 Genbank gene 1957387 1957980 . - . ID=gene-PYH62_09820;Name=PYH62_09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09820 CP118825.1 Protein Homology CDS 1957387 1957980 . - 0 ID=cds-WHI79063.1;Parent=gene-PYH62_09820;Dbxref=NCBI_GP:WHI79063.1;Name=WHI79063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016064875.1;locus_tag=PYH62_09820;product=hypothetical protein;protein_id=WHI79063.1;transl_table=11 CP118825.1 Genbank gene 1957977 1958612 . - . ID=gene-PYH62_09825;Name=PYH62_09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09825 CP118825.1 Protein Homology CDS 1957977 1958612 . - 0 ID=cds-WHI80269.1;Parent=gene-PYH62_09825;Dbxref=NCBI_GP:WHI80269.1;Name=WHI80269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001169067.1;locus_tag=PYH62_09825;product=MBL fold metallo-hydrolase;protein_id=WHI80269.1;transl_table=11 CP118825.1 Genbank gene 1958681 1959616 . - . ID=gene-PYH62_09830;Name=PYH62_09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09830 CP118825.1 Protein Homology CDS 1958681 1959616 . - 0 ID=cds-WHI79064.1;Parent=gene-PYH62_09830;Dbxref=NCBI_GP:WHI79064.1;Name=WHI79064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002493403.1;locus_tag=PYH62_09830;product=recombinase RecT;protein_id=WHI79064.1;transl_table=11 CP118825.1 Genbank gene 1959618 1961567 . - . ID=gene-PYH62_09835;Name=PYH62_09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09835 CP118825.1 Protein Homology CDS 1959618 1961567 . - 0 ID=cds-WHI79065.1;Parent=gene-PYH62_09835;Dbxref=NCBI_GP:WHI79065.1;Name=WHI79065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502043.1;locus_tag=PYH62_09835;product=AAA family ATPase;protein_id=WHI79065.1;transl_table=11 CP118825.1 Genbank gene 1961570 1961833 . - . ID=gene-PYH62_09840;Name=PYH62_09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09840 CP118825.1 Protein Homology CDS 1961570 1961833 . - 0 ID=cds-WHI79066.1;Parent=gene-PYH62_09840;Dbxref=NCBI_GP:WHI79066.1;Name=WHI79066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001638663.1;locus_tag=PYH62_09840;product=hypothetical protein;protein_id=WHI79066.1;transl_table=11 CP118825.1 Genbank gene 1961899 1962195 . - . ID=gene-PYH62_09845;Name=PYH62_09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09845 CP118825.1 GeneMarkS-2+ CDS 1961899 1962195 . - 0 ID=cds-WHI79067.1;Parent=gene-PYH62_09845;Dbxref=NCBI_GP:WHI79067.1;Name=WHI79067.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_09845;product=helix-turn-helix transcriptional regulator;protein_id=WHI79067.1;transl_table=11 CP118825.1 Genbank gene 1962208 1962378 . - . ID=gene-PYH62_09850;Name=PYH62_09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09850 CP118825.1 Protein Homology CDS 1962208 1962378 . - 0 ID=cds-WHI79068.1;Parent=gene-PYH62_09850;Dbxref=NCBI_GP:WHI79068.1;Name=WHI79068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835297.1;locus_tag=PYH62_09850;product=hypothetical protein;protein_id=WHI79068.1;transl_table=11 CP118825.1 Genbank gene 1962391 1962624 . - . ID=gene-PYH62_09855;Name=PYH62_09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09855 CP118825.1 GeneMarkS-2+ CDS 1962391 1962624 . - 0 ID=cds-WHI79069.1;Parent=gene-PYH62_09855;Dbxref=NCBI_GP:WHI79069.1;Name=WHI79069.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_09855;product=hypothetical protein;protein_id=WHI79069.1;transl_table=11 CP118825.1 Genbank gene 1962599 1962730 . - . ID=gene-PYH62_09860;Name=PYH62_09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09860 CP118825.1 GeneMarkS-2+ CDS 1962599 1962730 . - 0 ID=cds-WHI79070.1;Parent=gene-PYH62_09860;Dbxref=NCBI_GP:WHI79070.1;Name=WHI79070.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_09860;product=hypothetical protein;protein_id=WHI79070.1;transl_table=11 CP118825.1 Genbank gene 1962731 1963447 . - . ID=gene-PYH62_09865;Name=PYH62_09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09865 CP118825.1 Protein Homology CDS 1962731 1963447 . - 0 ID=cds-WHI79071.1;Parent=gene-PYH62_09865;Dbxref=NCBI_GP:WHI79071.1;Name=WHI79071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002456866.1;locus_tag=PYH62_09865;product=ORF6C domain-containing protein;protein_id=WHI79071.1;transl_table=11 CP118825.1 Genbank gene 1963499 1963690 . - . ID=gene-PYH62_09870;Name=PYH62_09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09870 CP118825.1 Protein Homology CDS 1963499 1963690 . - 0 ID=cds-WHI79072.1;Parent=gene-PYH62_09870;Dbxref=NCBI_GP:WHI79072.1;Name=WHI79072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001115061.1;locus_tag=PYH62_09870;product=helix-turn-helix transcriptional regulator;protein_id=WHI79072.1;transl_table=11 CP118825.1 Genbank gene 1963852 1964184 . + . ID=gene-PYH62_09875;Name=PYH62_09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09875 CP118825.1 Protein Homology CDS 1963852 1964184 . + 0 ID=cds-WHI79073.1;Parent=gene-PYH62_09875;Dbxref=NCBI_GP:WHI79073.1;Name=WHI79073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488942.1;locus_tag=PYH62_09875;product=helix-turn-helix transcriptional regulator;protein_id=WHI79073.1;transl_table=11 CP118825.1 Genbank gene 1964189 1964647 . + . ID=gene-PYH62_09880;Name=PYH62_09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09880 CP118825.1 Protein Homology CDS 1964189 1964647 . + 0 ID=cds-WHI79074.1;Parent=gene-PYH62_09880;Dbxref=NCBI_GP:WHI79074.1;Name=WHI79074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835292.1;locus_tag=PYH62_09880;product=ImmA/IrrE family metallo-endopeptidase;protein_id=WHI79074.1;transl_table=11 CP118825.1 Genbank gene 1964670 1965752 . + . ID=gene-PYH62_09885;Name=PYH62_09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09885 CP118825.1 Protein Homology CDS 1964670 1965752 . + 0 ID=cds-WHI79075.1;Parent=gene-PYH62_09885;Dbxref=NCBI_GP:WHI79075.1;Name=WHI79075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835291.1;locus_tag=PYH62_09885;product=DUF5067 domain-containing protein;protein_id=WHI79075.1;transl_table=11 CP118825.1 Genbank gene 1965863 1966618 . + . ID=gene-PYH62_09890;Name=PYH62_09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09890 CP118825.1 Protein Homology CDS 1965863 1966618 . + 0 ID=cds-WHI79076.1;Parent=gene-PYH62_09890;Dbxref=NCBI_GP:WHI79076.1;Name=WHI79076.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015973974.1;locus_tag=PYH62_09890;product=type II toxin-antitoxin system PemK/MazF family toxin;protein_id=WHI79076.1;transl_table=11 CP118825.1 Genbank gene 1966814 1968199 . + . ID=gene-PYH62_09895;Name=PYH62_09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09895 CP118825.1 Protein Homology CDS 1966814 1968199 . + 0 ID=cds-WHI79077.1;Parent=gene-PYH62_09895;Dbxref=NCBI_GP:WHI79077.1;Name=WHI79077.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001657254.1;locus_tag=PYH62_09895;product=recombinase family protein;protein_id=WHI79077.1;transl_table=11 CP118825.1 Genbank pseudogene 1968228 1969418 . + . ID=gene-PYH62_09900;Name=PYH62_09900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_09900;pseudo=true CP118825.1 Protein Homology CDS 1968228 1969418 . + 0 ID=cds-PYH62_09900;Parent=gene-PYH62_09900;Note=incomplete%3B partial on complete genome%3B missing N-terminus;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448886.1;locus_tag=PYH62_09900;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1969480 1969821 . - . ID=gene-PYH62_09905;Name=PYH62_09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09905 CP118825.1 Protein Homology CDS 1969480 1969821 . - 0 ID=cds-WHI79078.1;Parent=gene-PYH62_09905;Dbxref=NCBI_GP:WHI79078.1;Name=WHI79078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499147.1;locus_tag=PYH62_09905;product=DUF1450 domain-containing protein;protein_id=WHI79078.1;transl_table=11 CP118825.1 Genbank gene 1969998 1971074 . - . ID=gene-PYH62_09910;Name=PYH62_09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09910 CP118825.1 Protein Homology CDS 1969998 1971074 . - 0 ID=cds-WHI79079.1;Parent=gene-PYH62_09910;Dbxref=NCBI_GP:WHI79079.1;Name=WHI79079.1;Ontology_term=GO:0016126,GO:0019287,GO:0004631;gbkey=CDS;go_function=phosphomevalonate kinase activity|0004631||IEA;go_process=sterol biosynthetic process|0016126||IEA,isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499146.1;locus_tag=PYH62_09910;product=phosphomevalonate kinase;protein_id=WHI79079.1;transl_table=11 CP118825.1 Genbank pseudogene 1971087 1972071 . - . ID=gene-PYH62_09915;Name=mvaD;gbkey=Gene;gene=mvaD;gene_biotype=pseudogene;locus_tag=PYH62_09915;pseudo=true CP118825.1 Protein Homology CDS 1971087 1972071 . - 0 ID=cds-PYH62_09915;Parent=gene-PYH62_09915;Note=frameshifted;Ontology_term=GO:0019287,GO:0004163;gbkey=CDS;gene=mvaD;go_function=diphosphomevalonate decarboxylase activity|0004163||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002469363.1;locus_tag=PYH62_09915;product=diphosphomevalonate decarboxylase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1972076 1972999 . - . ID=gene-PYH62_09920;Name=mvk;gbkey=Gene;gene=mvk;gene_biotype=protein_coding;locus_tag=PYH62_09920 CP118825.1 Protein Homology CDS 1972076 1972999 . - 0 ID=cds-WHI79080.1;Parent=gene-PYH62_09920;Dbxref=NCBI_GP:WHI79080.1;Name=WHI79080.1;Ontology_term=GO:0016126,GO:0019287,GO:0004496;gbkey=CDS;gene=mvk;go_function=mevalonate kinase activity|0004496||IEA;go_process=sterol biosynthetic process|0016126||IEA,isopentenyl diphosphate biosynthetic process%2C mevalonate pathway|0019287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001833097.1;locus_tag=PYH62_09920;product=mevalonate kinase;protein_id=WHI79080.1;transl_table=11 CP118825.1 Genbank gene 1973412 1974248 . - . ID=gene-PYH62_09925;Name=PYH62_09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09925 CP118825.1 Protein Homology CDS 1973412 1974248 . - 0 ID=cds-WHI79081.1;Parent=gene-PYH62_09925;Dbxref=NCBI_GP:WHI79081.1;Name=WHI79081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488587.1;locus_tag=PYH62_09925;product=lipoate--protein ligase family protein;protein_id=WHI79081.1;transl_table=11 CP118825.1 Genbank gene 1974248 1975237 . - . ID=gene-PYH62_09930;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=PYH62_09930 CP118825.1 Protein Homology CDS 1974248 1975237 . - 0 ID=cds-WHI79082.1;Parent=gene-PYH62_09930;Dbxref=NCBI_GP:WHI79082.1;Name=WHI79082.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499142.1;locus_tag=PYH62_09930;product=phosphate acetyltransferase;protein_id=WHI79082.1;transl_table=11 CP118825.1 Genbank gene 1975408 1976157 . + . ID=gene-PYH62_09935;Name=PYH62_09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09935 CP118825.1 Protein Homology CDS 1975408 1976157 . + 0 ID=cds-WHI79083.1;Parent=gene-PYH62_09935;Dbxref=NCBI_GP:WHI79083.1;Name=WHI79083.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503939.1;locus_tag=PYH62_09935;product=heme-dependent peroxidase;protein_id=WHI79083.1;transl_table=11 CP118825.1 Genbank gene 1976595 1977362 . + . ID=gene-PYH62_09940;Name=PYH62_09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09940 CP118825.1 Protein Homology CDS 1976595 1977362 . + 0 ID=cds-WHI80270.1;Parent=gene-PYH62_09940;Dbxref=NCBI_GP:WHI80270.1;Name=WHI80270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276661.1;locus_tag=PYH62_09940;product=threonine/serine exporter ThrE family protein;protein_id=WHI80270.1;transl_table=11 CP118825.1 Genbank gene 1977375 1977827 . + . ID=gene-PYH62_09945;Name=PYH62_09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09945 CP118825.1 Protein Homology CDS 1977375 1977827 . + 0 ID=cds-WHI79084.1;Parent=gene-PYH62_09945;Dbxref=NCBI_GP:WHI79084.1;Name=WHI79084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499139.1;locus_tag=PYH62_09945;product=threonine/serine exporter family protein;protein_id=WHI79084.1;transl_table=11 CP118825.1 Genbank gene 1977884 1979353 . - . ID=gene-PYH62_09950;Name=PYH62_09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09950 CP118825.1 Protein Homology CDS 1977884 1979353 . - 0 ID=cds-WHI79085.1;Parent=gene-PYH62_09950;Dbxref=NCBI_GP:WHI79085.1;Name=WHI79085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488598.1;locus_tag=PYH62_09950;product=APC family permease;protein_id=WHI79085.1;transl_table=11 CP118825.1 Genbank gene 1979424 1979792 . - . ID=gene-PYH62_09955;Name=PYH62_09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09955 CP118825.1 Protein Homology CDS 1979424 1979792 . - 0 ID=cds-WHI80271.1;Parent=gene-PYH62_09955;Dbxref=NCBI_GP:WHI80271.1;Name=WHI80271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499137.1;locus_tag=PYH62_09955;product=DUF423 domain-containing protein;protein_id=WHI80271.1;transl_table=11 CP118825.1 Genbank gene 1979826 1980176 . - . ID=gene-PYH62_09960;Name=PYH62_09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09960 CP118825.1 Protein Homology CDS 1979826 1980176 . - 0 ID=cds-WHI79086.1;Parent=gene-PYH62_09960;Dbxref=NCBI_GP:WHI79086.1;Name=WHI79086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832078.1;locus_tag=PYH62_09960;product=DUF5327 family protein;protein_id=WHI79086.1;transl_table=11 CP118825.1 Genbank gene 1980177 1980836 . - . ID=gene-PYH62_09965;Name=PYH62_09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09965 CP118825.1 Protein Homology CDS 1980177 1980836 . - 0 ID=cds-WHI79087.1;Parent=gene-PYH62_09965;Dbxref=NCBI_GP:WHI79087.1;Name=WHI79087.1;Ontology_term=GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488583.1;locus_tag=PYH62_09965;product=uracil-DNA glycosylase;protein_id=WHI79087.1;transl_table=11 CP118825.1 Genbank pseudogene 1980978 1981809 . + . ID=gene-PYH62_09970;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=pseudogene;locus_tag=PYH62_09970;pseudo=true CP118825.1 Protein Homology CDS 1980978 1981809 . + 0 ID=cds-PYH62_09970;Parent=gene-PYH62_09970;Note=frameshifted;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001185456.1;locus_tag=PYH62_09970;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1982454 1982615 . + . ID=gene-PYH62_09975;Name=vraX;gbkey=Gene;gene=vraX;gene_biotype=protein_coding;locus_tag=PYH62_09975 CP118825.1 Protein Homology CDS 1982454 1982615 . + 0 ID=cds-WHI79088.1;Parent=gene-PYH62_09975;Dbxref=NCBI_GP:WHI79088.1;Name=WHI79088.1;gbkey=CDS;gene=vraX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176053.1;locus_tag=PYH62_09975;product=C1q-binding complement inhibitor VraX;protein_id=WHI79088.1;transl_table=11 CP118825.1 Genbank gene 1982908 1983186 . - . ID=gene-PYH62_09980;Name=PYH62_09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09980 CP118825.1 Protein Homology CDS 1982908 1983186 . - 0 ID=cds-WHI79089.1;Parent=gene-PYH62_09980;Dbxref=NCBI_GP:WHI79089.1;Name=WHI79089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488040.1;locus_tag=PYH62_09980;product=hypothetical protein;protein_id=WHI79089.1;transl_table=11 CP118825.1 Genbank gene 1983176 1983556 . - . ID=gene-PYH62_09985;Name=PYH62_09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09985 CP118825.1 Protein Homology CDS 1983176 1983556 . - 0 ID=cds-WHI79090.1;Parent=gene-PYH62_09985;Dbxref=NCBI_GP:WHI79090.1;Name=WHI79090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016931405.1;locus_tag=PYH62_09985;product=protein VraC;protein_id=WHI79090.1;transl_table=11 CP118825.1 Genbank gene 1983525 1984670 . - . ID=gene-PYH62_09990;Name=PYH62_09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09990 CP118825.1 Protein Homology CDS 1983525 1984670 . - 0 ID=cds-WHI79091.1;Parent=gene-PYH62_09990;Dbxref=NCBI_GP:WHI79091.1;Name=WHI79091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488037.1;locus_tag=PYH62_09990;product=thiolase family protein;protein_id=WHI79091.1;transl_table=11 CP118825.1 Genbank gene 1984667 1986052 . - . ID=gene-PYH62_09995;Name=PYH62_09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_09995 CP118825.1 Protein Homology CDS 1984667 1986052 . - 0 ID=cds-WHI79092.1;Parent=gene-PYH62_09995;Dbxref=NCBI_GP:WHI79092.1;Name=WHI79092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176056.1;locus_tag=PYH62_09995;product=AMP-binding protein;protein_id=WHI79092.1;transl_table=11 CP118825.1 Genbank gene 1986172 1989462 . - . ID=gene-PYH62_10000;Name=PYH62_10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10000 CP118825.1 Protein Homology CDS 1986172 1989462 . - 0 ID=cds-WHI79093.1;Parent=gene-PYH62_10000;Dbxref=NCBI_GP:WHI79093.1;Name=WHI79093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834872.1;locus_tag=PYH62_10000;product=CapA family protein;protein_id=WHI79093.1;transl_table=11 CP118825.1 Genbank gene 1989496 1989975 . - . ID=gene-PYH62_10005;Name=PYH62_10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10005 CP118825.1 Protein Homology CDS 1989496 1989975 . - 0 ID=cds-WHI79094.1;Parent=gene-PYH62_10005;Dbxref=NCBI_GP:WHI79094.1;Name=WHI79094.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021127.2;locus_tag=PYH62_10005;product=CapA family protein;protein_id=WHI79094.1;transl_table=11 CP118825.1 Genbank gene 1990023 1990271 . - . ID=gene-PYH62_10010;Name=PYH62_10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10010 CP118825.1 Protein Homology CDS 1990023 1990271 . - 0 ID=cds-WHI80272.1;Parent=gene-PYH62_10010;Dbxref=NCBI_GP:WHI80272.1;Name=WHI80272.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021127.2;locus_tag=PYH62_10010;product=CapA family protein;protein_id=WHI80272.1;transl_table=11 CP118825.1 Genbank gene 1990501 1991061 . - . ID=gene-PYH62_10015;Name=PYH62_10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10015 CP118825.1 GeneMarkS-2+ CDS 1990501 1991061 . - 0 ID=cds-WHI79095.1;Parent=gene-PYH62_10015;Dbxref=NCBI_GP:WHI79095.1;Name=WHI79095.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_10015;product=hypothetical protein;protein_id=WHI79095.1;transl_table=11 CP118825.1 Genbank gene 1991072 1991521 . - . ID=gene-PYH62_10020;Name=PYH62_10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10020 CP118825.1 Protein Homology CDS 1991072 1991521 . - 0 ID=cds-WHI79096.1;Parent=gene-PYH62_10020;Dbxref=NCBI_GP:WHI79096.1;Name=WHI79096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176061.1;locus_tag=PYH62_10020;product=hypothetical protein;protein_id=WHI79096.1;transl_table=11 CP118825.1 Genbank gene 1991611 1991808 . - . ID=gene-PYH62_10025;Name=PYH62_10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10025 CP118825.1 Protein Homology CDS 1991611 1991808 . - 0 ID=cds-WHI79097.1;Parent=gene-PYH62_10025;Dbxref=NCBI_GP:WHI79097.1;Name=WHI79097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176062.1;locus_tag=PYH62_10025;product=hypothetical protein;protein_id=WHI79097.1;transl_table=11 CP118825.1 Genbank gene 1992299 1992490 . - . ID=gene-PYH62_10030;Name=PYH62_10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10030 CP118825.1 Protein Homology CDS 1992299 1992490 . - 0 ID=cds-WHI79098.1;Parent=gene-PYH62_10030;Dbxref=NCBI_GP:WHI79098.1;Name=WHI79098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176063.1;locus_tag=PYH62_10030;product=hypothetical protein;protein_id=WHI79098.1;transl_table=11 CP118825.1 Genbank gene 1992950 1993498 . - . ID=gene-PYH62_10035;Name=hxlB;gbkey=Gene;gene=hxlB;gene_biotype=protein_coding;locus_tag=PYH62_10035 CP118825.1 Protein Homology CDS 1992950 1993498 . - 0 ID=cds-WHI79099.1;Parent=gene-PYH62_10035;Dbxref=NCBI_GP:WHI79099.1;Name=WHI79099.1;Ontology_term=GO:1901135,GO:0016853;gbkey=CDS;gene=hxlB;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020362353.1;locus_tag=PYH62_10035;product=6-phospho-3-hexuloisomerase;protein_id=WHI79099.1;transl_table=11 CP118825.1 Genbank gene 1993500 1994132 . - . ID=gene-PYH62_10040;Name=hxlA;gbkey=Gene;gene=hxlA;gene_biotype=protein_coding;locus_tag=PYH62_10040 CP118825.1 Protein Homology CDS 1993500 1994132 . - 0 ID=cds-WHI79100.1;Parent=gene-PYH62_10040;Dbxref=NCBI_GP:WHI79100.1;Name=WHI79100.1;Ontology_term=GO:0005975,GO:0043801;gbkey=CDS;gene=hxlA;go_function=hexulose-6-phosphate synthase activity|0043801||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834869.1;locus_tag=PYH62_10040;product=3-hexulose-6-phosphate synthase;protein_id=WHI79100.1;transl_table=11 CP118825.1 Genbank gene 1994319 1994681 . + . ID=gene-PYH62_10045;Name=PYH62_10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10045 CP118825.1 Protein Homology CDS 1994319 1994681 . + 0 ID=cds-WHI79101.1;Parent=gene-PYH62_10045;Dbxref=NCBI_GP:WHI79101.1;Name=WHI79101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499123.1;locus_tag=PYH62_10045;product=YojF family protein;protein_id=WHI79101.1;transl_table=11 CP118825.1 Genbank gene 1994695 1995360 . + . ID=gene-PYH62_10050;Name=bshB2;gbkey=Gene;gene=bshB2;gene_biotype=protein_coding;locus_tag=PYH62_10050 CP118825.1 Protein Homology CDS 1994695 1995360 . + 0 ID=cds-WHI79102.1;Parent=gene-PYH62_10050;Dbxref=NCBI_GP:WHI79102.1;Name=WHI79102.1;Ontology_term=GO:0019213;gbkey=CDS;gene=bshB2;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499122.1;locus_tag=PYH62_10050;product=bacillithiol biosynthesis deacetylase BshB2;protein_id=WHI79102.1;transl_table=11 CP118825.1 Genbank gene 1995388 1996266 . + . ID=gene-PYH62_10055;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=PYH62_10055 CP118825.1 Protein Homology CDS 1995388 1996266 . + 0 ID=cds-WHI79103.1;Parent=gene-PYH62_10055;Dbxref=NCBI_GP:WHI79103.1;Name=WHI79103.1;Ontology_term=GO:0035998,GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;go_process=7%2C8-dihydroneopterin 3'-triphosphate biosynthetic process|0035998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445753.1;locus_tag=PYH62_10055;product=GTP cyclohydrolase FolE2;protein_id=WHI79103.1;transl_table=11 CP118825.1 Genbank pseudogene 1996319 1997934 . - . ID=gene-PYH62_10060;Name=PYH62_10060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_10060;pseudo=true CP118825.1 Protein Homology CDS 1996319 1997934 . - 0 ID=cds-PYH62_10060;Parent=gene-PYH62_10060;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448877.1;locus_tag=PYH62_10060;product=poly(glycerol-phosphate) alpha-glucosyltransferase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 1998059 2005633 . - . ID=gene-PYH62_10065;Name=PYH62_10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10065 CP118825.1 Protein Homology CDS 1998059 2005633 . - 0 ID=cds-WHI79104.1;Parent=gene-PYH62_10065;Dbxref=NCBI_GP:WHI79104.1;Name=WHI79104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501257.1;locus_tag=PYH62_10065;product=E domain-containing protein;protein_id=WHI79104.1;transl_table=11 CP118825.1 Genbank gene 2005948 2006514 . - . ID=gene-PYH62_10070;Name=PYH62_10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10070 CP118825.1 Protein Homology CDS 2005948 2006514 . - 0 ID=cds-WHI79105.1;Parent=gene-PYH62_10070;Dbxref=NCBI_GP:WHI79105.1;Name=WHI79105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499115.1;locus_tag=PYH62_10070;product=NAD(P)H-dependent oxidoreductase;protein_id=WHI79105.1;transl_table=11 CP118825.1 Genbank gene 2006542 2007408 . - . ID=gene-PYH62_10075;Name=PYH62_10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10075 CP118825.1 Protein Homology CDS 2006542 2007408 . - 0 ID=cds-WHI79106.1;Parent=gene-PYH62_10075;Dbxref=NCBI_GP:WHI79106.1;Name=WHI79106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175353.1;locus_tag=PYH62_10075;product=HAD family hydrolase;protein_id=WHI79106.1;transl_table=11 CP118825.1 Genbank gene 2007526 2008014 . - . ID=gene-PYH62_10080;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=PYH62_10080 CP118825.1 Protein Homology CDS 2007526 2008014 . - 0 ID=cds-WHI79107.1;Parent=gene-PYH62_10080;Dbxref=NCBI_GP:WHI79107.1;Name=WHI79107.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175352.1;locus_tag=PYH62_10080;product=tRNA adenosine(34) deaminase TadA;protein_id=WHI79107.1;transl_table=11 CP118825.1 Genbank gene 2008078 2008695 . + . ID=gene-PYH62_10085;Name=PYH62_10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10085 CP118825.1 Protein Homology CDS 2008078 2008695 . + 0 ID=cds-WHI79108.1;Parent=gene-PYH62_10085;Dbxref=NCBI_GP:WHI79108.1;Name=WHI79108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832278.1;locus_tag=PYH62_10085;product=deoxynucleoside kinase;protein_id=WHI79108.1;transl_table=11 CP118825.1 Genbank gene 2008688 2009350 . + . ID=gene-PYH62_10090;Name=PYH62_10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10090 CP118825.1 Protein Homology CDS 2008688 2009350 . + 0 ID=cds-WHI79109.1;Parent=gene-PYH62_10090;Dbxref=NCBI_GP:WHI79109.1;Name=WHI79109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499111.1;locus_tag=PYH62_10090;product=deoxynucleoside kinase;protein_id=WHI79109.1;transl_table=11 CP118825.1 Genbank gene 2009496 2010197 . - . ID=gene-PYH62_10095;Name=PYH62_10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10095 CP118825.1 Protein Homology CDS 2009496 2010197 . - 0 ID=cds-WHI79110.1;Parent=gene-PYH62_10095;Dbxref=NCBI_GP:WHI79110.1;Name=WHI79110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449021.1;locus_tag=PYH62_10095;product=HAD family hydrolase;protein_id=WHI79110.1;transl_table=11 CP118825.1 Genbank gene 2010483 2010710 . - . ID=gene-PYH62_10100;Name=PYH62_10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10100 CP118825.1 Protein Homology CDS 2010483 2010710 . - 0 ID=cds-WHI79111.1;Parent=gene-PYH62_10100;Dbxref=NCBI_GP:WHI79111.1;Name=WHI79111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488402.1;locus_tag=PYH62_10100;product=hypothetical protein;protein_id=WHI79111.1;transl_table=11 CP118825.1 Genbank gene 2011391 2011585 . + . ID=gene-PYH62_10105;Name=PYH62_10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10105 CP118825.1 Protein Homology CDS 2011391 2011585 . + 0 ID=cds-WHI79112.1;Parent=gene-PYH62_10105;Dbxref=NCBI_GP:WHI79112.1;Name=WHI79112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175348.1;locus_tag=PYH62_10105;product=hypothetical protein;protein_id=WHI79112.1;transl_table=11 CP118825.1 Genbank gene 2012566 2013177 . - . ID=gene-PYH62_10110;Name=PYH62_10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10110 CP118825.1 GeneMarkS-2+ CDS 2012566 2013177 . - 0 ID=cds-WHI79113.1;Parent=gene-PYH62_10110;Dbxref=NCBI_GP:WHI79113.1;Name=WHI79113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_10110;product=hypothetical protein;protein_id=WHI79113.1;transl_table=11 CP118825.1 Genbank gene 2013170 2013928 . - . ID=gene-PYH62_10115;Name=PYH62_10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10115 CP118825.1 Protein Homology CDS 2013170 2013928 . - 0 ID=cds-WHI79114.1;Parent=gene-PYH62_10115;Dbxref=NCBI_GP:WHI79114.1;Name=WHI79114.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017885.2;locus_tag=PYH62_10115;product=ImmA/IrrE family metallo-endopeptidase;protein_id=WHI79114.1;transl_table=11 CP118825.1 Genbank gene 2013921 2014235 . - . ID=gene-PYH62_10120;Name=PYH62_10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10120 CP118825.1 GeneMarkS-2+ CDS 2013921 2014235 . - 0 ID=cds-WHI79115.1;Parent=gene-PYH62_10120;Dbxref=NCBI_GP:WHI79115.1;Name=WHI79115.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_10120;product=hypothetical protein;protein_id=WHI79115.1;transl_table=11 CP118825.1 Genbank gene 2015616 2015876 . - . ID=gene-PYH62_10125;Name=PYH62_10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10125 CP118825.1 Protein Homology CDS 2015616 2015876 . - 0 ID=cds-WHI79116.1;Parent=gene-PYH62_10125;Dbxref=NCBI_GP:WHI79116.1;Name=WHI79116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276700.1;locus_tag=PYH62_10125;product=hypothetical protein;protein_id=WHI79116.1;transl_table=11 CP118825.1 Genbank gene 2017170 2017358 . - . ID=gene-PYH62_10130;Name=PYH62_10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10130 CP118825.1 Protein Homology CDS 2017170 2017358 . - 0 ID=cds-WHI79117.1;Parent=gene-PYH62_10130;Dbxref=NCBI_GP:WHI79117.1;Name=WHI79117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455893.1;locus_tag=PYH62_10130;product=hypothetical protein;protein_id=WHI79117.1;transl_table=11 CP118825.1 Genbank gene 2017443 2017607 . - . ID=gene-PYH62_10135;Name=PYH62_10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10135 CP118825.1 Protein Homology CDS 2017443 2017607 . - 0 ID=cds-WHI79118.1;Parent=gene-PYH62_10135;Dbxref=NCBI_GP:WHI79118.1;Name=WHI79118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449599.1;locus_tag=PYH62_10135;product=hypothetical protein;protein_id=WHI79118.1;transl_table=11 CP118825.1 Genbank gene 2018076 2018552 . - . ID=gene-PYH62_10140;Name=PYH62_10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10140 CP118825.1 GeneMarkS-2+ CDS 2018076 2018552 . - 0 ID=cds-WHI79119.1;Parent=gene-PYH62_10140;Dbxref=NCBI_GP:WHI79119.1;Name=WHI79119.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_10140;product=hypothetical protein;protein_id=WHI79119.1;transl_table=11 CP118825.1 Genbank gene 2018665 2019093 . - . ID=gene-PYH62_10145;Name=PYH62_10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10145 CP118825.1 Protein Homology CDS 2018665 2019093 . - 0 ID=cds-WHI79120.1;Parent=gene-PYH62_10145;Dbxref=NCBI_GP:WHI79120.1;Name=WHI79120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488642.1;locus_tag=PYH62_10145;product=terminase small subunit;protein_id=WHI79120.1;transl_table=11 CP118825.1 Genbank gene 2019119 2019358 . - . ID=gene-PYH62_10150;Name=PYH62_10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10150 CP118825.1 Protein Homology CDS 2019119 2019358 . - 0 ID=cds-WHI79121.1;Parent=gene-PYH62_10150;Dbxref=NCBI_GP:WHI79121.1;Name=WHI79121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488613.1;locus_tag=PYH62_10150;product=terminase small subunit;protein_id=WHI79121.1;transl_table=11 CP118825.1 Genbank gene 2019413 2019934 . - . ID=gene-PYH62_10155;Name=PYH62_10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10155 CP118825.1 Protein Homology CDS 2019413 2019934 . - 0 ID=cds-WHI79122.1;Parent=gene-PYH62_10155;Dbxref=NCBI_GP:WHI79122.1;Name=WHI79122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488638.1;locus_tag=PYH62_10155;product=hypothetical protein;protein_id=WHI79122.1;transl_table=11 CP118825.1 Genbank gene 2019946 2020179 . - . ID=gene-PYH62_10160;Name=PYH62_10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10160 CP118825.1 Protein Homology CDS 2019946 2020179 . - 0 ID=cds-WHI79123.1;Parent=gene-PYH62_10160;Dbxref=NCBI_GP:WHI79123.1;Name=WHI79123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175337.1;locus_tag=PYH62_10160;product=hypothetical protein;protein_id=WHI79123.1;transl_table=11 CP118825.1 Genbank gene 2020169 2021011 . - . ID=gene-PYH62_10165;Name=PYH62_10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10165 CP118825.1 Protein Homology CDS 2020169 2021011 . - 0 ID=cds-WHI79124.1;Parent=gene-PYH62_10165;Dbxref=NCBI_GP:WHI79124.1;Name=WHI79124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488618.1;locus_tag=PYH62_10165;product=pathogenicity island protein;protein_id=WHI79124.1;transl_table=11 CP118825.1 Genbank gene 2021065 2021862 . - . ID=gene-PYH62_10170;Name=PYH62_10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10170 CP118825.1 Protein Homology CDS 2021065 2021862 . - 0 ID=cds-WHI79125.1;Parent=gene-PYH62_10170;Dbxref=NCBI_GP:WHI79125.1;Name=WHI79125.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488628.1;locus_tag=PYH62_10170;product=ATP-binding protein;protein_id=WHI79125.1;transl_table=11 CP118825.1 Genbank gene 2021875 2022657 . - . ID=gene-PYH62_10175;Name=PYH62_10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10175 CP118825.1 Protein Homology CDS 2021875 2022657 . - 0 ID=cds-WHI79126.1;Parent=gene-PYH62_10175;Dbxref=NCBI_GP:WHI79126.1;Name=WHI79126.1;Ontology_term=GO:0006269;gbkey=CDS;go_process=DNA replication%2C synthesis of RNA primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488616.1;locus_tag=PYH62_10175;product=DnaD domain protein;protein_id=WHI79126.1;transl_table=11 CP118825.1 Genbank gene 2022935 2023252 . - . ID=gene-PYH62_10180;Name=PYH62_10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10180 CP118825.1 Protein Homology CDS 2022935 2023252 . - 0 ID=cds-WHI79127.1;Parent=gene-PYH62_10180;Dbxref=NCBI_GP:WHI79127.1;Name=WHI79127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175332.1;locus_tag=PYH62_10180;product=DUF1474 family protein;protein_id=WHI79127.1;transl_table=11 CP118825.1 Genbank gene 2023255 2023458 . - . ID=gene-PYH62_10185;Name=PYH62_10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10185 CP118825.1 Protein Homology CDS 2023255 2023458 . - 0 ID=cds-WHI79128.1;Parent=gene-PYH62_10185;Dbxref=NCBI_GP:WHI79128.1;Name=WHI79128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455736.1;locus_tag=PYH62_10185;product=hypothetical protein;protein_id=WHI79128.1;transl_table=11 CP118825.1 Genbank gene 2023516 2023725 . - . ID=gene-PYH62_10190;Name=PYH62_10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10190 CP118825.1 Protein Homology CDS 2023516 2023725 . - 0 ID=cds-WHI79129.1;Parent=gene-PYH62_10190;Dbxref=NCBI_GP:WHI79129.1;Name=WHI79129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455737.1;locus_tag=PYH62_10190;product=hypothetical protein;protein_id=WHI79129.1;transl_table=11 CP118825.1 Genbank gene 2023791 2024060 . - . ID=gene-PYH62_10195;Name=PYH62_10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10195 CP118825.1 Protein Homology CDS 2023791 2024060 . - 0 ID=cds-WHI79130.1;Parent=gene-PYH62_10195;Dbxref=NCBI_GP:WHI79130.1;Name=WHI79130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455738.1;locus_tag=PYH62_10195;product=DNA-binding protein;protein_id=WHI79130.1;transl_table=11 CP118825.1 Genbank gene 2024098 2024301 . - . ID=gene-PYH62_10200;Name=PYH62_10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10200 CP118825.1 Protein Homology CDS 2024098 2024301 . - 0 ID=cds-WHI79131.1;Parent=gene-PYH62_10200;Dbxref=NCBI_GP:WHI79131.1;Name=WHI79131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455739.1;locus_tag=PYH62_10200;product=transcriptional regulator;protein_id=WHI79131.1;transl_table=11 CP118825.1 Genbank gene 2024451 2025311 . + . ID=gene-PYH62_10205;Name=PYH62_10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10205 CP118825.1 Protein Homology CDS 2024451 2025311 . + 0 ID=cds-WHI79132.1;Parent=gene-PYH62_10205;Dbxref=NCBI_GP:WHI79132.1;Name=WHI79132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455740.1;locus_tag=PYH62_10205;product=helix-turn-helix transcriptional regulator;protein_id=WHI79132.1;transl_table=11 CP118825.1 Genbank gene 2025413 2025646 . + . ID=gene-PYH62_10210;Name=PYH62_10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10210 CP118825.1 Protein Homology CDS 2025413 2025646 . + 0 ID=cds-WHI79133.1;Parent=gene-PYH62_10210;Dbxref=NCBI_GP:WHI79133.1;Name=WHI79133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829658.1;locus_tag=PYH62_10210;product=hypothetical protein;protein_id=WHI79133.1;transl_table=11 CP118825.1 Genbank gene 2025983 2027119 . + . ID=gene-PYH62_10215;Name=PYH62_10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10215 CP118825.1 Protein Homology CDS 2025983 2027119 . + 0 ID=cds-WHI79134.1;Parent=gene-PYH62_10215;Dbxref=NCBI_GP:WHI79134.1;Name=WHI79134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175329.1;locus_tag=PYH62_10215;product=site-specific integrase;protein_id=WHI79134.1;transl_table=11 CP118825.1 Genbank gene 2027216 2028295 . - . ID=gene-PYH62_10220;Name=PYH62_10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10220 CP118825.1 Protein Homology CDS 2027216 2028295 . - 0 ID=cds-WHI79135.1;Parent=gene-PYH62_10220;Dbxref=NCBI_GP:WHI79135.1;Name=WHI79135.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835794.1;locus_tag=PYH62_10220;product=branched-chain amino acid aminotransferase;protein_id=WHI79135.1;transl_table=11 CP118825.1 Genbank gene 2028470 2029417 . - . ID=gene-PYH62_10225;Name=PYH62_10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10225 CP118825.1 Protein Homology CDS 2028470 2029417 . - 0 ID=cds-WHI79136.1;Parent=gene-PYH62_10225;Dbxref=NCBI_GP:WHI79136.1;Name=WHI79136.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455743.1;locus_tag=PYH62_10225;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WHI79136.1;transl_table=11 CP118825.1 Genbank gene 2029802 2030755 . - . ID=gene-PYH62_10230;Name=PYH62_10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10230 CP118825.1 Protein Homology CDS 2029802 2030755 . - 0 ID=cds-WHI79137.1;Parent=gene-PYH62_10230;Dbxref=NCBI_GP:WHI79137.1;Name=WHI79137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455745.1;locus_tag=PYH62_10230;product=ornithine cyclodeaminase family protein;protein_id=WHI79137.1;transl_table=11 CP118825.1 Genbank gene 2031068 2031487 . - . ID=gene-PYH62_10235;Name=PYH62_10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10235 CP118825.1 Protein Homology CDS 2031068 2031487 . - 0 ID=cds-WHI79138.1;Parent=gene-PYH62_10235;Dbxref=NCBI_GP:WHI79138.1;Name=WHI79138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835791.1;locus_tag=PYH62_10235;product=NUDIX hydrolase;protein_id=WHI79138.1;transl_table=11 CP118825.1 Genbank gene 2031492 2032004 . - . ID=gene-PYH62_10240;Name=PYH62_10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10240 CP118825.1 Protein Homology CDS 2031492 2032004 . - 0 ID=cds-WHI79139.1;Parent=gene-PYH62_10240;Dbxref=NCBI_GP:WHI79139.1;Name=WHI79139.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835790.1;locus_tag=PYH62_10240;product=GNAT family N-acetyltransferase;protein_id=WHI79139.1;transl_table=11 CP118825.1 Genbank pseudogene 2032160 2032303 . - . ID=gene-PYH62_10245;Name=PYH62_10245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_10245;pseudo=true CP118825.1 Protein Homology CDS 2032160 2032303 . - 0 ID=cds-PYH62_10245;Parent=gene-PYH62_10245;Note=incomplete%3B partial on complete genome%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499104.1;locus_tag=PYH62_10245;product=8-amino-7-oxononanoate synthase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 2032482 2033648 . + . ID=gene-PYH62_10250;Name=PYH62_10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10250 CP118825.1 Protein Homology CDS 2032482 2033648 . + 0 ID=cds-WHI79140.1;Parent=gene-PYH62_10250;Dbxref=NCBI_GP:WHI79140.1;Name=WHI79140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002498065.1;locus_tag=PYH62_10250;product=M20 family metallopeptidase;protein_id=WHI79140.1;transl_table=11 CP118825.1 Genbank pseudogene 2033831 2035016 . - . ID=gene-PYH62_10255;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=PYH62_10255;pseudo=true CP118825.1 Protein Homology CDS 2033831 2035016 . - 0 ID=cds-PYH62_10255;Parent=gene-PYH62_10255;Note=frameshifted;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499102.1;locus_tag=PYH62_10255;product=elongation factor Tu;pseudo=true;transl_table=11 CP118825.1 Genbank gene 2035227 2037308 . - . ID=gene-PYH62_10260;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=PYH62_10260 CP118825.1 Protein Homology CDS 2035227 2037308 . - 0 ID=cds-WHI79141.1;Parent=gene-PYH62_10260;Dbxref=NCBI_GP:WHI79141.1;Name=WHI79141.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017804675.1;locus_tag=PYH62_10260;product=elongation factor G;protein_id=WHI79141.1;transl_table=11 CP118825.1 Genbank gene 2037430 2037900 . - . ID=gene-PYH62_10265;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=PYH62_10265 CP118825.1 Protein Homology CDS 2037430 2037900 . - 0 ID=cds-WHI79142.1;Parent=gene-PYH62_10265;Dbxref=NCBI_GP:WHI79142.1;Name=WHI79142.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsG;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1;locus_tag=PYH62_10265;product=30S ribosomal protein S7;protein_id=WHI79142.1;transl_table=11 CP118825.1 Genbank gene 2037970 2038383 . - . ID=gene-PYH62_10270;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=PYH62_10270 CP118825.1 Protein Homology CDS 2037970 2038383 . - 0 ID=cds-WHI79143.1;Parent=gene-PYH62_10270;Dbxref=NCBI_GP:WHI79143.1;Name=WHI79143.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsL;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001142337.1;locus_tag=PYH62_10270;product=30S ribosomal protein S12;protein_id=WHI79143.1;transl_table=11 CP118825.1 Genbank gene 2038473 2038733 . - . ID=gene-PYH62_10275;Name=PYH62_10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10275 CP118825.1 Protein Homology CDS 2038473 2038733 . - 0 ID=cds-WHI79144.1;Parent=gene-PYH62_10275;Dbxref=NCBI_GP:WHI79144.1;Name=WHI79144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505638.1;locus_tag=PYH62_10275;product=ribosomal L7Ae/L30e/S12e/Gadd45 family protein;protein_id=WHI79144.1;transl_table=11 CP118825.1 Genbank gene 2038881 2042474 . - . ID=gene-PYH62_10280;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=PYH62_10280 CP118825.1 Protein Homology CDS 2038881 2042474 . - 0 ID=cds-WHI80273.1;Parent=gene-PYH62_10280;Dbxref=NCBI_GP:WHI80273.1;Name=WHI80273.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoC;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499097.1;locus_tag=PYH62_10280;product=DNA-directed RNA polymerase subunit beta';protein_id=WHI80273.1;transl_table=11 CP118825.1 Genbank gene 2042664 2046215 . - . ID=gene-PYH62_10285;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=PYH62_10285 CP118825.1 Protein Homology CDS 2042664 2046215 . - 0 ID=cds-WHI79145.1;Parent=gene-PYH62_10285;Dbxref=NCBI_GP:WHI79145.1;Name=WHI79145.1;Ontology_term=GO:0006351,GO:0003899,GO:0000345;gbkey=CDS;gene=rpoB;go_component=cytosolic DNA-directed RNA polymerase complex|0000345||IEA;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499096.2;locus_tag=PYH62_10285;product=DNA-directed RNA polymerase subunit beta;protein_id=WHI79145.1;transl_table=11 CP118825.1 Genbank gene 2046419 2047027 . - . ID=gene-PYH62_10290;Name=PYH62_10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10290 CP118825.1 Protein Homology CDS 2046419 2047027 . - 0 ID=cds-WHI79146.1;Parent=gene-PYH62_10290;Dbxref=NCBI_GP:WHI79146.1;Name=WHI79146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449036.1;locus_tag=PYH62_10290;product=class I SAM-dependent methyltransferase;protein_id=WHI79146.1;transl_table=11 CP118825.1 Genbank pseudogene 2047199 2047568 . - . ID=gene-PYH62_10295;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=pseudogene;locus_tag=PYH62_10295;pseudo=true CP118825.1 Protein Homology CDS 2047199 2047568 . - 0 ID=cds-PYH62_10295;Parent=gene-PYH62_10295;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplL;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001273587.1;locus_tag=PYH62_10295;product=50S ribosomal protein L7/L12;pseudo=true;transl_table=11 CP118825.1 Genbank gene 2047608 2048108 . - . ID=gene-PYH62_10300;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=PYH62_10300 CP118825.1 Protein Homology CDS 2047608 2048108 . - 0 ID=cds-WHI79147.1;Parent=gene-PYH62_10300;Dbxref=NCBI_GP:WHI79147.1;Name=WHI79147.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499093.1;locus_tag=PYH62_10300;product=50S ribosomal protein L10;protein_id=WHI79147.1;transl_table=11 CP118825.1 cmsearch sequence_feature 2048139 2048292 . - . ID=id-CP118825.1:2048139..2048292;Dbxref=RFAM:RF00557;Note=ribosomal protein L10 leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.4 CP118825.1 Genbank pseudogene 2048420 2049116 . - . ID=gene-PYH62_10305;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=pseudogene;locus_tag=PYH62_10305;pseudo=true CP118825.1 Protein Homology CDS 2048420 2049116 . - 0 ID=cds-PYH62_10305;Parent=gene-PYH62_10305;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplA;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019468572.1;locus_tag=PYH62_10305;product=50S ribosomal protein L1;pseudo=true;transl_table=11 CP118825.1 Genbank gene 2049323 2049745 . - . ID=gene-PYH62_10310;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=PYH62_10310 CP118825.1 Protein Homology CDS 2049323 2049745 . - 0 ID=cds-WHI79148.1;Parent=gene-PYH62_10310;Dbxref=NCBI_GP:WHI79148.1;Name=WHI79148.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplK;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012664221.1;locus_tag=PYH62_10310;product=50S ribosomal protein L11;protein_id=WHI79148.1;transl_table=11 CP118825.1 Genbank gene 2049932 2050480 . - . ID=gene-PYH62_10315;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=PYH62_10315 CP118825.1 Protein Homology CDS 2049932 2050480 . - 0 ID=cds-WHI79149.1;Parent=gene-PYH62_10315;Dbxref=NCBI_GP:WHI79149.1;Name=WHI79149.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusG;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832303.1;locus_tag=PYH62_10315;product=transcription termination/antitermination protein NusG;protein_id=WHI79149.1;transl_table=11 CP118825.1 Genbank gene 2050498 2050698 . - . ID=gene-PYH62_10320;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=PYH62_10320 CP118825.1 Protein Homology CDS 2050498 2050698 . - 0 ID=cds-WHI79150.1;Parent=gene-PYH62_10320;Dbxref=NCBI_GP:WHI79150.1;Name=WHI79150.1;Ontology_term=GO:0043952,GO:0015450,GO:0005886;gbkey=CDS;gene=secE;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175313.1;locus_tag=PYH62_10320;product=preprotein translocase subunit SecE;protein_id=WHI79150.1;transl_table=11 CP118825.1 Genbank gene 2050742 2050885 . - . ID=gene-PYH62_10325;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=PYH62_10325 CP118825.1 Protein Homology CDS 2050742 2050885 . - 0 ID=cds-WHI79151.1;Parent=gene-PYH62_10325;Dbxref=NCBI_GP:WHI79151.1;Name=WHI79151.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmG;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451211.1;locus_tag=PYH62_10325;product=50S ribosomal protein L33;protein_id=WHI79151.1;transl_table=11 CP118825.1 Genbank gene 2050966 2051556 . - . ID=gene-PYH62_10330;Name=PYH62_10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10330 CP118825.1 Protein Homology CDS 2050966 2051556 . - 0 ID=cds-WHI79152.1;Parent=gene-PYH62_10330;Dbxref=NCBI_GP:WHI79152.1;Name=WHI79152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175312.1;locus_tag=PYH62_10330;product=sigma-70 family RNA polymerase sigma factor;protein_id=WHI79152.1;transl_table=11 CP118825.1 Genbank gene 2051624 2052154 . - . ID=gene-PYH62_10335;Name=PYH62_10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10335 CP118825.1 Protein Homology CDS 2051624 2052154 . - 0 ID=cds-WHI79153.1;Parent=gene-PYH62_10335;Dbxref=NCBI_GP:WHI79153.1;Name=WHI79153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455753.1;locus_tag=PYH62_10335;product=NYN domain-containing protein;protein_id=WHI79153.1;transl_table=11 CP118825.1 Genbank gene 2052151 2052900 . - . ID=gene-PYH62_10340;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=PYH62_10340 CP118825.1 Protein Homology CDS 2052151 2052900 . - 0 ID=cds-WHI79154.1;Parent=gene-PYH62_10340;Dbxref=NCBI_GP:WHI79154.1;Name=WHI79154.1;Ontology_term=GO:0009451,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175310.1;locus_tag=PYH62_10340;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WHI79154.1;transl_table=11 CP118825.1 Genbank gene 2052909 2053295 . - . ID=gene-PYH62_10345;Name=PYH62_10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10345 CP118825.1 Protein Homology CDS 2052909 2053295 . - 0 ID=cds-WHI79155.1;Parent=gene-PYH62_10345;Dbxref=NCBI_GP:WHI79155.1;Name=WHI79155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491434.1;locus_tag=PYH62_10345;product=Mini-ribonuclease 3;protein_id=WHI79155.1;transl_table=11 CP118825.1 Genbank gene 2053297 2054697 . - . ID=gene-PYH62_10350;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=PYH62_10350 CP118825.1 Protein Homology CDS 2053297 2054697 . - 0 ID=cds-WHI79156.1;Parent=gene-PYH62_10350;Dbxref=NCBI_GP:WHI79156.1;Name=WHI79156.1;Ontology_term=GO:0006423,GO:0004817,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000631968.1;locus_tag=PYH62_10350;product=cysteine--tRNA ligase;protein_id=WHI79156.1;transl_table=11 CP118825.1 Genbank gene 2054681 2055310 . - . ID=gene-PYH62_10355;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=PYH62_10355 CP118825.1 Protein Homology CDS 2054681 2055310 . - 0 ID=cds-WHI80274.1;Parent=gene-PYH62_10355;Dbxref=NCBI_GP:WHI80274.1;Name=WHI80274.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016187697.1;locus_tag=PYH62_10355;product=serine O-acetyltransferase;protein_id=WHI80274.1;transl_table=11 CP118825.1 Genbank gene 2055697 2057151 . - . ID=gene-PYH62_10360;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=PYH62_10360 CP118825.1 Protein Homology CDS 2055697 2057151 . - 0 ID=cds-WHI79157.1;Parent=gene-PYH62_10360;Dbxref=NCBI_GP:WHI79157.1;Name=WHI79157.1;Ontology_term=GO:0006424,GO:0004818,GO:0009332;gbkey=CDS;gene=gltX;go_component=glutamate-tRNA ligase complex|0009332||IEA;go_function=glutamate-tRNA ligase activity|0004818||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511256.1;locus_tag=PYH62_10360;product=glutamate--tRNA ligase;protein_id=WHI79157.1;transl_table=11 CP118825.1 Genbank gene 2057429 2058502 . - . ID=gene-PYH62_10365;Name=PYH62_10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10365 CP118825.1 Protein Homology CDS 2057429 2058502 . - 0 ID=cds-WHI79158.1;Parent=gene-PYH62_10365;Dbxref=NCBI_GP:WHI79158.1;Name=WHI79158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175305.1;locus_tag=PYH62_10365;product=PIN/TRAM domain-containing protein;protein_id=WHI79158.1;transl_table=11 CP118825.1 Genbank gene 2058525 2059898 . - . ID=gene-PYH62_10370;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=PYH62_10370 CP118825.1 Protein Homology CDS 2058525 2059898 . - 0 ID=cds-WHI79159.1;Parent=gene-PYH62_10370;Dbxref=NCBI_GP:WHI79159.1;Name=WHI79159.1;Ontology_term=GO:0006281,GO:0005524;gbkey=CDS;gene=radA;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175304.1;locus_tag=PYH62_10370;product=DNA repair protein RadA;protein_id=WHI79159.1;transl_table=11 CP118825.1 Genbank gene 2060032 2062503 . - . ID=gene-PYH62_10375;Name=PYH62_10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10375 CP118825.1 Protein Homology CDS 2060032 2062503 . - 0 ID=cds-WHI79160.1;Parent=gene-PYH62_10375;Dbxref=NCBI_GP:WHI79160.1;Name=WHI79160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175303.1;locus_tag=PYH62_10375;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WHI79160.1;transl_table=11 CP118825.1 Genbank gene 2062519 2063529 . - . ID=gene-PYH62_10380;Name=PYH62_10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10380 CP118825.1 Protein Homology CDS 2062519 2063529 . - 0 ID=cds-WHI79161.1;Parent=gene-PYH62_10380;Dbxref=NCBI_GP:WHI79161.1;Name=WHI79161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002511350.1;locus_tag=PYH62_10380;product=protein arginine kinase;protein_id=WHI79161.1;transl_table=11 CP118825.1 Genbank gene 2063519 2064082 . - . ID=gene-PYH62_10385;Name=PYH62_10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10385 CP118825.1 Protein Homology CDS 2063519 2064082 . - 0 ID=cds-WHI79162.1;Parent=gene-PYH62_10385;Dbxref=NCBI_GP:WHI79162.1;Name=WHI79162.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832265.1;locus_tag=PYH62_10385;product=UvrB/UvrC motif-containing protein;protein_id=WHI79162.1;transl_table=11 CP118825.1 Genbank gene 2064114 2064575 . - . ID=gene-PYH62_10390;Name=PYH62_10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10390 CP118825.1 Protein Homology CDS 2064114 2064575 . - 0 ID=cds-WHI79163.1;Parent=gene-PYH62_10390;Dbxref=NCBI_GP:WHI79163.1;Name=WHI79163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000551761.1;locus_tag=PYH62_10390;product=CtsR family transcriptional regulator;protein_id=WHI79163.1;transl_table=11 CP118825.1 Genbank gene 2064730 2065944 . + . ID=gene-PYH62_10395;Name=PYH62_10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10395 CP118825.1 Protein Homology CDS 2064730 2065944 . + 0 ID=cds-WHI79164.1;Parent=gene-PYH62_10395;Dbxref=NCBI_GP:WHI79164.1;Name=WHI79164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020363115.1;locus_tag=PYH62_10395;product=NupC/NupG family nucleoside CNT transporter;protein_id=WHI79164.1;transl_table=11 CP118825.1 Genbank gene 2065981 2066535 . - . ID=gene-PYH62_10400;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;locus_tag=PYH62_10400 CP118825.1 Protein Homology CDS 2065981 2066535 . - 0 ID=cds-WHI79165.1;Parent=gene-PYH62_10400;Dbxref=NCBI_GP:WHI79165.1;Name=WHI79165.1;Ontology_term=GO:0042823,GO:0016884;gbkey=CDS;gene=pdxT;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175299.1;locus_tag=PYH62_10400;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=WHI79165.1;transl_table=11 CP118825.1 Genbank pseudogene 2066539 2067427 . - . ID=gene-PYH62_10405;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=pseudogene;locus_tag=PYH62_10405;pseudo=true CP118825.1 Protein Homology CDS 2066539 2067427 . - 0 ID=cds-PYH62_10405;Parent=gene-PYH62_10405;Note=frameshifted;Ontology_term=GO:0042823,GO:0003824;gbkey=CDS;gene=pdxS;go_function=catalytic activity|0003824||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011303857.1;locus_tag=PYH62_10405;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;pseudo=true;transl_table=11 CP118825.1 Genbank gene 2067523 2068893 . + . ID=gene-PYH62_10410;Name=PYH62_10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10410 CP118825.1 Protein Homology CDS 2067523 2068893 . + 0 ID=cds-WHI79166.1;Parent=gene-PYH62_10410;Dbxref=NCBI_GP:WHI79166.1;Name=WHI79166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175297.1;locus_tag=PYH62_10410;product=PLP-dependent aminotransferase family protein;protein_id=WHI79166.1;transl_table=11 CP118825.1 Genbank gene 2069093 2069207 . - . ID=gene-PYH62_10415;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PYH62_10415 CP118825.1 cmsearch rRNA 2069093 2069207 . - . ID=rna-PYH62_10415;Parent=gene-PYH62_10415;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_10415;product=5S ribosomal RNA CP118825.1 cmsearch exon 2069093 2069207 . - . ID=exon-PYH62_10415-1;Parent=rna-PYH62_10415;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_10415;product=5S ribosomal RNA CP118825.1 Genbank gene 2069275 2072196 . - . ID=gene-PYH62_10420;Name=PYH62_10420;gbkey=Gene;gene_biotype=rRNA;locus_tag=PYH62_10420 CP118825.1 cmsearch rRNA 2069275 2072196 . - . ID=rna-PYH62_10420;Parent=gene-PYH62_10420;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_10420;product=23S ribosomal RNA CP118825.1 cmsearch exon 2069275 2072196 . - . ID=exon-PYH62_10420-1;Parent=rna-PYH62_10420;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_10420;product=23S ribosomal RNA CP118825.1 Genbank gene 2072342 2072418 . - . ID=gene-PYH62_10425;Name=PYH62_10425;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_10425 CP118825.1 tRNAscan-SE tRNA 2072342 2072418 . - . ID=rna-PYH62_10425;Parent=gene-PYH62_10425;anticodon=(pos:complement(2072382..2072384));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_10425;product=tRNA-Ile CP118825.1 tRNAscan-SE exon 2072342 2072418 . - . ID=exon-PYH62_10425-1;Parent=rna-PYH62_10425;anticodon=(pos:complement(2072382..2072384));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_10425;product=tRNA-Ile CP118825.1 Genbank gene 2072518 2074069 . - . ID=gene-PYH62_10430;Name=PYH62_10430;gbkey=Gene;gene_biotype=rRNA;locus_tag=PYH62_10430 CP118825.1 cmsearch rRNA 2072518 2074069 . - . ID=rna-PYH62_10430;Parent=gene-PYH62_10430;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_10430;product=16S ribosomal RNA CP118825.1 cmsearch exon 2072518 2074069 . - . ID=exon-PYH62_10430-1;Parent=rna-PYH62_10430;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_10430;product=16S ribosomal RNA CP118825.1 Genbank gene 2074286 2074400 . - . ID=gene-PYH62_10435;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PYH62_10435 CP118825.1 cmsearch rRNA 2074286 2074400 . - . ID=rna-PYH62_10435;Parent=gene-PYH62_10435;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_10435;product=5S ribosomal RNA CP118825.1 cmsearch exon 2074286 2074400 . - . ID=exon-PYH62_10435-1;Parent=rna-PYH62_10435;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_10435;product=5S ribosomal RNA CP118825.1 Genbank gene 2074468 2077389 . - . ID=gene-PYH62_10440;Name=PYH62_10440;gbkey=Gene;gene_biotype=rRNA;locus_tag=PYH62_10440 CP118825.1 cmsearch rRNA 2074468 2077389 . - . ID=rna-PYH62_10440;Parent=gene-PYH62_10440;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_10440;product=23S ribosomal RNA CP118825.1 cmsearch exon 2074468 2077389 . - . ID=exon-PYH62_10440-1;Parent=rna-PYH62_10440;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_10440;product=23S ribosomal RNA CP118825.1 Genbank gene 2077690 2079240 . - . ID=gene-PYH62_10445;Name=PYH62_10445;gbkey=Gene;gene_biotype=rRNA;locus_tag=PYH62_10445 CP118825.1 cmsearch rRNA 2077690 2079240 . - . ID=rna-PYH62_10445;Parent=gene-PYH62_10445;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_10445;product=16S ribosomal RNA CP118825.1 cmsearch exon 2077690 2079240 . - . ID=exon-PYH62_10445-1;Parent=rna-PYH62_10445;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_10445;product=16S ribosomal RNA CP118825.1 Genbank gene 2079363 2079439 . - . ID=gene-PYH62_10450;Name=PYH62_10450;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_10450 CP118825.1 tRNAscan-SE tRNA 2079363 2079439 . - . ID=rna-PYH62_10450;Parent=gene-PYH62_10450;anticodon=(pos:complement(2079403..2079405));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_10450;product=tRNA-Ala CP118825.1 tRNAscan-SE exon 2079363 2079439 . - . ID=exon-PYH62_10450-1;Parent=rna-PYH62_10450;anticodon=(pos:complement(2079403..2079405));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_10450;product=tRNA-Ala CP118825.1 Genbank gene 2079455 2079528 . - . ID=gene-PYH62_10455;Name=PYH62_10455;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_10455 CP118825.1 tRNAscan-SE tRNA 2079455 2079528 . - . ID=rna-PYH62_10455;Parent=gene-PYH62_10455;anticodon=(pos:complement(2079492..2079494));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_10455;product=tRNA-Pro CP118825.1 tRNAscan-SE exon 2079455 2079528 . - . ID=exon-PYH62_10455-1;Parent=rna-PYH62_10455;anticodon=(pos:complement(2079492..2079494));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_10455;product=tRNA-Pro CP118825.1 Genbank gene 2079552 2079628 . - . ID=gene-PYH62_10460;Name=PYH62_10460;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_10460 CP118825.1 tRNAscan-SE tRNA 2079552 2079628 . - . ID=rna-PYH62_10460;Parent=gene-PYH62_10460;anticodon=(pos:complement(2079592..2079594));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_10460;product=tRNA-Arg CP118825.1 tRNAscan-SE exon 2079552 2079628 . - . ID=exon-PYH62_10460-1;Parent=rna-PYH62_10460;anticodon=(pos:complement(2079592..2079594));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_10460;product=tRNA-Arg CP118825.1 Genbank gene 2079640 2079728 . - . ID=gene-PYH62_10465;Name=PYH62_10465;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_10465 CP118825.1 tRNAscan-SE tRNA 2079640 2079728 . - . ID=rna-PYH62_10465;Parent=gene-PYH62_10465;anticodon=(pos:complement(2079692..2079694));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_10465;product=tRNA-Leu CP118825.1 tRNAscan-SE exon 2079640 2079728 . - . ID=exon-PYH62_10465-1;Parent=rna-PYH62_10465;anticodon=(pos:complement(2079692..2079694));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_10465;product=tRNA-Leu CP118825.1 Genbank gene 2079736 2079810 . - . ID=gene-PYH62_10470;Name=PYH62_10470;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_10470 CP118825.1 tRNAscan-SE tRNA 2079736 2079810 . - . ID=rna-PYH62_10470;Parent=gene-PYH62_10470;anticodon=(pos:complement(2079776..2079778));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_10470;product=tRNA-Gly CP118825.1 tRNAscan-SE exon 2079736 2079810 . - . ID=exon-PYH62_10470-1;Parent=rna-PYH62_10470;anticodon=(pos:complement(2079776..2079778));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_10470;product=tRNA-Gly CP118825.1 Genbank gene 2079829 2079901 . - . ID=gene-PYH62_10475;Name=PYH62_10475;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_10475 CP118825.1 tRNAscan-SE tRNA 2079829 2079901 . - . ID=rna-PYH62_10475;Parent=gene-PYH62_10475;anticodon=(pos:complement(2079866..2079868));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_10475;product=tRNA-Lys CP118825.1 tRNAscan-SE exon 2079829 2079901 . - . ID=exon-PYH62_10475-1;Parent=rna-PYH62_10475;anticodon=(pos:complement(2079866..2079868));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_10475;product=tRNA-Lys CP118825.1 Genbank gene 2079907 2079982 . - . ID=gene-PYH62_10480;Name=PYH62_10480;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_10480 CP118825.1 tRNAscan-SE tRNA 2079907 2079982 . - . ID=rna-PYH62_10480;Parent=gene-PYH62_10480;anticodon=(pos:complement(2079947..2079949));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_10480;product=tRNA-Thr CP118825.1 tRNAscan-SE exon 2079907 2079982 . - . ID=exon-PYH62_10480-1;Parent=rna-PYH62_10480;anticodon=(pos:complement(2079947..2079949));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_10480;product=tRNA-Thr CP118825.1 Genbank gene 2079994 2080069 . - . ID=gene-PYH62_10485;Name=PYH62_10485;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_10485 CP118825.1 tRNAscan-SE tRNA 2079994 2080069 . - . ID=rna-PYH62_10485;Parent=gene-PYH62_10485;anticodon=(pos:complement(2080034..2080036));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_10485;product=tRNA-Val CP118825.1 tRNAscan-SE exon 2079994 2080069 . - . ID=exon-PYH62_10485-1;Parent=rna-PYH62_10485;anticodon=(pos:complement(2080034..2080036));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_10485;product=tRNA-Val CP118825.1 Genbank gene 2080080 2080194 . - . ID=gene-PYH62_10490;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PYH62_10490 CP118825.1 cmsearch rRNA 2080080 2080194 . - . ID=rna-PYH62_10490;Parent=gene-PYH62_10490;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_10490;product=5S ribosomal RNA CP118825.1 cmsearch exon 2080080 2080194 . - . ID=exon-PYH62_10490-1;Parent=rna-PYH62_10490;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_10490;product=5S ribosomal RNA CP118825.1 Genbank gene 2080529 2082019 . - . ID=gene-PYH62_10495;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=PYH62_10495 CP118825.1 Protein Homology CDS 2080529 2082019 . - 0 ID=cds-WHI79167.1;Parent=gene-PYH62_10495;Dbxref=NCBI_GP:WHI79167.1;Name=WHI79167.1;Ontology_term=GO:0006430,GO:0004824,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002436798.1;locus_tag=PYH62_10495;product=lysine--tRNA ligase;protein_id=WHI79167.1;transl_table=11 CP118825.1 Genbank gene 2082181 2082660 . - . ID=gene-PYH62_10500;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=PYH62_10500 CP118825.1 Protein Homology CDS 2082181 2082660 . - 0 ID=cds-WHI79168.1;Parent=gene-PYH62_10500;Dbxref=NCBI_GP:WHI79168.1;Name=WHI79168.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002503786.1;locus_tag=PYH62_10500;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WHI79168.1;transl_table=11 CP118825.1 Genbank gene 2082660 2083025 . - . ID=gene-PYH62_10505;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=PYH62_10505 CP118825.1 Protein Homology CDS 2082660 2083025 . - 0 ID=cds-WHI79169.1;Parent=gene-PYH62_10505;Dbxref=NCBI_GP:WHI79169.1;Name=WHI79169.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499067.1;locus_tag=PYH62_10505;product=dihydroneopterin aldolase;protein_id=WHI79169.1;transl_table=11 CP118825.1 Genbank pseudogene 2083003 2083808 . - . ID=gene-PYH62_10510;Name=folP;gbkey=Gene;gene=folP;gene_biotype=pseudogene;locus_tag=PYH62_10510;pseudo=true CP118825.1 Protein Homology CDS 2083003 2083808 . - 0 ID=cds-PYH62_10510;Parent=gene-PYH62_10510;Note=frameshifted;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440771.1;locus_tag=PYH62_10510;product=dihydropteroate synthase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 2083990 2084922 . - . ID=gene-PYH62_10515;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=PYH62_10515 CP118825.1 Protein Homology CDS 2083990 2084922 . - 0 ID=cds-WHI79170.1;Parent=gene-PYH62_10515;Dbxref=NCBI_GP:WHI79170.1;Name=WHI79170.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499065.1;locus_tag=PYH62_10515;product=cysteine synthase A;protein_id=WHI79170.1;transl_table=11 CP118825.1 Genbank gene 2085119 2086003 . - . ID=gene-PYH62_10520;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=PYH62_10520 CP118825.1 Protein Homology CDS 2085119 2086003 . - 0 ID=cds-WHI79171.1;Parent=gene-PYH62_10520;Dbxref=NCBI_GP:WHI79171.1;Name=WHI79171.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488155.1;locus_tag=PYH62_10520;product=Hsp33 family molecular chaperone HslO;protein_id=WHI79171.1;transl_table=11 CP118825.1 Genbank gene 2086215 2088347 . - . ID=gene-PYH62_10525;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=PYH62_10525 CP118825.1 Protein Homology CDS 2086215 2088347 . - 0 ID=cds-WHI79172.1;Parent=gene-PYH62_10525;Dbxref=NCBI_GP:WHI79172.1;Name=WHI79172.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887;gbkey=CDS;gene=ftsH;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835389.1;locus_tag=PYH62_10525;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WHI79172.1;transl_table=11 CP118825.1 Genbank gene 2088631 2089170 . - . ID=gene-PYH62_10530;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=PYH62_10530 CP118825.1 Protein Homology CDS 2088631 2089170 . - 0 ID=cds-WHI79173.1;Parent=gene-PYH62_10530;Dbxref=NCBI_GP:WHI79173.1;Name=WHI79173.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017722022.1;locus_tag=PYH62_10530;product=hypoxanthine phosphoribosyltransferase;protein_id=WHI79173.1;transl_table=11 CP118825.1 Genbank gene 2089171 2090472 . - . ID=gene-PYH62_10535;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=PYH62_10535 CP118825.1 Protein Homology CDS 2089171 2090472 . - 0 ID=cds-WHI79174.1;Parent=gene-PYH62_10535;Dbxref=NCBI_GP:WHI79174.1;Name=WHI79174.1;Ontology_term=GO:0006400,GO:0016879;gbkey=CDS;gene=tilS;go_function=ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449954.1;locus_tag=PYH62_10535;product=tRNA lysidine(34) synthetase TilS;protein_id=WHI79174.1;transl_table=11 CP118825.1 Genbank gene 2090680 2091081 . - . ID=gene-PYH62_10540;Name=PYH62_10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10540 CP118825.1 Protein Homology CDS 2090680 2091081 . - 0 ID=cds-WHI79175.1;Parent=gene-PYH62_10540;Dbxref=NCBI_GP:WHI79175.1;Name=WHI79175.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499060.1;locus_tag=PYH62_10540;product=S1 domain-containing RNA-binding protein;protein_id=WHI79175.1;transl_table=11 CP118825.1 Genbank gene 2091216 2091611 . - . ID=gene-PYH62_10545;Name=PYH62_10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10545 CP118825.1 Protein Homology CDS 2091216 2091611 . - 0 ID=cds-WHI79176.1;Parent=gene-PYH62_10545;Dbxref=NCBI_GP:WHI79176.1;Name=WHI79176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449948.1;locus_tag=PYH62_10545;product=septum formation initiator family protein;protein_id=WHI79176.1;transl_table=11 CP118825.1 Genbank gene 2091647 2091928 . - . ID=gene-PYH62_10550;Name=PYH62_10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10550 CP118825.1 Protein Homology CDS 2091647 2091928 . - 0 ID=cds-WHI79177.1;Parent=gene-PYH62_10550;Dbxref=NCBI_GP:WHI79177.1;Name=WHI79177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449975.1;locus_tag=PYH62_10550;product=RNA-binding S4 domain-containing protein;protein_id=WHI79177.1;transl_table=11 CP118825.1 Genbank gene 2091925 2093115 . - . ID=gene-PYH62_10555;Name=PYH62_10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10555 CP118825.1 Protein Homology CDS 2091925 2093115 . - 0 ID=cds-WHI79178.1;Parent=gene-PYH62_10555;Dbxref=NCBI_GP:WHI79178.1;Name=WHI79178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455838.1;locus_tag=PYH62_10555;product=MazG nucleotide pyrophosphohydrolase domain-containing protein;protein_id=WHI79178.1;transl_table=11 CP118825.1 Genbank pseudogene 2093118 2094612 . - . ID=gene-PYH62_10560;Name=PYH62_10560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_10560;pseudo=true CP118825.1 Protein Homology CDS 2093118 2094612 . - 0 ID=cds-PYH62_10560;Parent=gene-PYH62_10560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000680728.1;locus_tag=PYH62_10560;product=polysaccharide biosynthesis protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 2094677 2098180 . - . ID=gene-PYH62_10565;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=PYH62_10565 CP118825.1 Protein Homology CDS 2094677 2098180 . - 0 ID=cds-WHI80275.1;Parent=gene-PYH62_10565;Dbxref=NCBI_GP:WHI80275.1;Name=WHI80275.1;Ontology_term=GO:0006281,GO:0003690,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=mfd;go_function=double-stranded DNA binding|0003690||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835392.1;locus_tag=PYH62_10565;product=transcription-repair coupling factor;protein_id=WHI80275.1;transl_table=11 CP118825.1 Genbank pseudogene 2098183 2098754 . - . ID=gene-PYH62_10570;Name=pth;gbkey=Gene;gene=pth;gene_biotype=pseudogene;locus_tag=PYH62_10570;pseudo=true CP118825.1 Protein Homology CDS 2098183 2098754 . - 0 ID=cds-PYH62_10570;Parent=gene-PYH62_10570;Note=frameshifted;Ontology_term=GO:0006412,GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002451736.1;locus_tag=PYH62_10570;product=aminoacyl-tRNA hydrolase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 2099060 2099725 . - . ID=gene-PYH62_10575;Name=PYH62_10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10575 CP118825.1 Protein Homology CDS 2099060 2099725 . - 0 ID=cds-WHI79179.1;Parent=gene-PYH62_10575;Dbxref=NCBI_GP:WHI79179.1;Name=WHI79179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276760.1;locus_tag=PYH62_10575;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WHI79179.1;transl_table=11 CP118825.1 Genbank gene 2099898 2100863 . - . ID=gene-PYH62_10580;Name=PYH62_10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10580 CP118825.1 Protein Homology CDS 2099898 2100863 . - 0 ID=cds-WHI79180.1;Parent=gene-PYH62_10580;Dbxref=NCBI_GP:WHI79180.1;Name=WHI79180.1;Ontology_term=GO:0009156,GO:0004749;gbkey=CDS;go_function=ribose phosphate diphosphokinase activity|0004749||IEA;go_process=ribonucleoside monophosphate biosynthetic process|0009156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016426512.1;locus_tag=PYH62_10580;product=ribose-phosphate diphosphokinase;protein_id=WHI79180.1;transl_table=11 CP118825.1 Genbank gene 2101075 2102430 . - . ID=gene-PYH62_10585;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=PYH62_10585 CP118825.1 Protein Homology CDS 2101075 2102430 . - 0 ID=cds-WHI79181.1;Parent=gene-PYH62_10585;Dbxref=NCBI_GP:WHI79181.1;Name=WHI79181.1;Ontology_term=GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276762.1;locus_tag=PYH62_10585;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WHI79181.1;transl_table=11 CP118825.1 Genbank gene 2102693 2103004 . - . ID=gene-PYH62_10590;Name=spoVG;gbkey=Gene;gene=spoVG;gene_biotype=protein_coding;locus_tag=PYH62_10590 CP118825.1 Protein Homology CDS 2102693 2103004 . - 0 ID=cds-WHI79182.1;Parent=gene-PYH62_10590;Dbxref=NCBI_GP:WHI79182.1;Name=WHI79182.1;Ontology_term=GO:0030435;gbkey=CDS;gene=spoVG;go_process=sporulation resulting in formation of a cellular spore|0030435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001832195.1;locus_tag=PYH62_10590;product=septation regulator SpoVG;protein_id=WHI79182.1;transl_table=11 CP118825.1 Genbank gene 2103073 2103453 . - . ID=gene-PYH62_10595;Name=PYH62_10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10595 CP118825.1 Protein Homology CDS 2103073 2103453 . - 0 ID=cds-WHI79183.1;Parent=gene-PYH62_10595;Dbxref=NCBI_GP:WHI79183.1;Name=WHI79183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499047.1;locus_tag=PYH62_10595;product=RidA family protein;protein_id=WHI79183.1;transl_table=11 CP118825.1 Genbank gene 2103469 2104293 . - . ID=gene-PYH62_10600;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=PYH62_10600 CP118825.1 Protein Homology CDS 2103469 2104293 . - 0 ID=cds-WHI79184.1;Parent=gene-PYH62_10600;Dbxref=NCBI_GP:WHI79184.1;Name=WHI79184.1;Ontology_term=GO:0006355,GO:0009116,GO:0045892,GO:0045982,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,nucleoside metabolic process|0009116||IEA,negative regulation of DNA-templated transcription|0045892||IEA,negative regulation of purine nucleobase metabolic process|0045982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276765.1;locus_tag=PYH62_10600;product=pur operon repressor;protein_id=WHI79184.1;transl_table=11 CP118825.1 Genbank pseudogene 2104308 2105157 . - . ID=gene-PYH62_10605;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=pseudogene;locus_tag=PYH62_10605;pseudo=true CP118825.1 Protein Homology CDS 2104308 2105157 . - 0 ID=cds-PYH62_10605;Parent=gene-PYH62_10605;Note=frameshifted;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499045.1;locus_tag=PYH62_10605;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 2105434 2105697 . - . ID=gene-PYH62_10610;Name=PYH62_10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10610 CP118825.1 Protein Homology CDS 2105434 2105697 . - 0 ID=cds-WHI79185.1;Parent=gene-PYH62_10610;Dbxref=NCBI_GP:WHI79185.1;Name=WHI79185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499044.1;locus_tag=PYH62_10610;product=Veg family protein;protein_id=WHI79185.1;transl_table=11 CP118825.1 Genbank gene 2105797 2106687 . - . ID=gene-PYH62_10615;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=PYH62_10615 CP118825.1 Protein Homology CDS 2105797 2106687 . - 0 ID=cds-WHI79186.1;Parent=gene-PYH62_10615;Dbxref=NCBI_GP:WHI79186.1;Name=WHI79186.1;Ontology_term=GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276768.1;locus_tag=PYH62_10615;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WHI79186.1;transl_table=11 CP118825.1 Genbank gene 2106690 2107238 . - . ID=gene-PYH62_10620;Name=rnmV;gbkey=Gene;gene=rnmV;gene_biotype=protein_coding;locus_tag=PYH62_10620 CP118825.1 Protein Homology CDS 2106690 2107238 . - 0 ID=cds-WHI80276.1;Parent=gene-PYH62_10620;Dbxref=NCBI_GP:WHI80276.1;Name=WHI80276.1;Ontology_term=GO:0006364,GO:0043822;gbkey=CDS;gene=rnmV;go_function=ribonuclease M5 activity|0043822||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002465712.1;locus_tag=PYH62_10620;product=ribonuclease M5;protein_id=WHI80276.1;transl_table=11 CP118825.1 Genbank gene 2107387 2108157 . - . ID=gene-PYH62_10625;Name=PYH62_10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10625 CP118825.1 Protein Homology CDS 2107387 2108157 . - 0 ID=cds-WHI79187.1;Parent=gene-PYH62_10625;Dbxref=NCBI_GP:WHI79187.1;Name=WHI79187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176425.1;locus_tag=PYH62_10625;product=TatD family hydrolase;protein_id=WHI79187.1;transl_table=11 CP118825.1 Genbank gene 2108181 2110157 . - . ID=gene-PYH62_10630;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=PYH62_10630 CP118825.1 Protein Homology CDS 2108181 2110157 . - 0 ID=cds-WHI79188.1;Parent=gene-PYH62_10630;Dbxref=NCBI_GP:WHI79188.1;Name=WHI79188.1;Ontology_term=GO:0006431,GO:0000049,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=tRNA binding|0000049||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499040.1;locus_tag=PYH62_10630;product=methionine--tRNA ligase;protein_id=WHI79188.1;transl_table=11 CP118825.1 Genbank gene 2110396 2111238 . - . ID=gene-PYH62_10635;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=PYH62_10635 CP118825.1 Protein Homology CDS 2110396 2111238 . - 0 ID=cds-WHI79189.1;Parent=gene-PYH62_10635;Dbxref=NCBI_GP:WHI79189.1;Name=WHI79189.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002455848.1;locus_tag=PYH62_10635;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WHI79189.1;transl_table=11 CP118825.1 Genbank gene 2111240 2111488 . - . ID=gene-PYH62_10640;Name=PYH62_10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10640 CP118825.1 Protein Homology CDS 2111240 2111488 . - 0 ID=cds-WHI79190.1;Parent=gene-PYH62_10640;Dbxref=NCBI_GP:WHI79190.1;Name=WHI79190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449964.1;locus_tag=PYH62_10640;product=GIY-YIG nuclease family protein;protein_id=WHI79190.1;transl_table=11 CP118825.1 Genbank gene 2111481 2112206 . - . ID=gene-PYH62_10645;Name=PYH62_10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10645 CP118825.1 Protein Homology CDS 2111481 2112206 . - 0 ID=cds-WHI79191.1;Parent=gene-PYH62_10645;Dbxref=NCBI_GP:WHI79191.1;Name=WHI79191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499036.1;locus_tag=PYH62_10645;product=tRNA1(Val) (adenine(37)-N6)-methyltransferase;protein_id=WHI79191.1;transl_table=11 CP118825.1 Genbank gene 2112328 2112720 . - . ID=gene-PYH62_10650;Name=yabA;gbkey=Gene;gene=yabA;gene_biotype=protein_coding;locus_tag=PYH62_10650 CP118825.1 Protein Homology CDS 2112328 2112720 . - 0 ID=cds-WHI79192.1;Parent=gene-PYH62_10650;Dbxref=NCBI_GP:WHI79192.1;Name=WHI79192.1;gbkey=CDS;gene=yabA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017176430.1;locus_tag=PYH62_10650;product=DNA replication initiation control protein YabA;protein_id=WHI79192.1;transl_table=11 CP118825.1 Genbank gene 2112737 2113540 . - . ID=gene-PYH62_10655;Name=PYH62_10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10655 CP118825.1 Protein Homology CDS 2112737 2113540 . - 0 ID=cds-WHI79193.1;Parent=gene-PYH62_10655;Dbxref=NCBI_GP:WHI79193.1;Name=WHI79193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499034.1;locus_tag=PYH62_10655;product=stage 0 sporulation family protein;protein_id=WHI79193.1;transl_table=11 CP118825.1 Genbank gene 2113541 2114467 . - . ID=gene-PYH62_10660;Name=PYH62_10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10660 CP118825.1 Protein Homology CDS 2113541 2114467 . - 0 ID=cds-WHI79194.1;Parent=gene-PYH62_10660;Dbxref=NCBI_GP:WHI79194.1;Name=WHI79194.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019835402.1;locus_tag=PYH62_10660;product=DNA polymerase III subunit delta' C-terminal domain-containing protein;protein_id=WHI79194.1;transl_table=11 CP118825.1 Genbank gene 2114645 2114974 . - . ID=gene-PYH62_10665;Name=PYH62_10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10665 CP118825.1 Protein Homology CDS 2114645 2114974 . - 0 ID=cds-WHI79195.1;Parent=gene-PYH62_10665;Dbxref=NCBI_GP:WHI79195.1;Name=WHI79195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019467733.1;locus_tag=PYH62_10665;product=cyclic-di-AMP receptor;protein_id=WHI79195.1;transl_table=11 CP118825.1 Genbank gene 2115002 2115619 . - . ID=gene-PYH62_10670;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=PYH62_10670 CP118825.1 Protein Homology CDS 2115002 2115619 . - 0 ID=cds-WHI79196.1;Parent=gene-PYH62_10670;Dbxref=NCBI_GP:WHI79196.1;Name=WHI79196.1;Ontology_term=GO:0015949,GO:0004798;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002449965.1;locus_tag=PYH62_10670;product=dTMP kinase;protein_id=WHI79196.1;transl_table=11 CP118825.1 Genbank gene 2115621 2116958 . - . ID=gene-PYH62_10675;Name=PYH62_10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10675 CP118825.1 Protein Homology CDS 2115621 2116958 . - 0 ID=cds-WHI79197.1;Parent=gene-PYH62_10675;Dbxref=NCBI_GP:WHI79197.1;Name=WHI79197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002494266.1;locus_tag=PYH62_10675;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WHI79197.1;transl_table=11 CP118825.1 Genbank gene 2117153 2117267 . - . ID=gene-PYH62_10680;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=PYH62_10680 CP118825.1 cmsearch rRNA 2117153 2117267 . - . ID=rna-PYH62_10680;Parent=gene-PYH62_10680;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_10680;product=5S ribosomal RNA CP118825.1 cmsearch exon 2117153 2117267 . - . ID=exon-PYH62_10680-1;Parent=rna-PYH62_10680;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_10680;product=5S ribosomal RNA CP118825.1 Genbank gene 2117335 2120256 . - . ID=gene-PYH62_10685;Name=PYH62_10685;gbkey=Gene;gene_biotype=rRNA;locus_tag=PYH62_10685 CP118825.1 cmsearch rRNA 2117335 2120256 . - . ID=rna-PYH62_10685;Parent=gene-PYH62_10685;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_10685;product=23S ribosomal RNA CP118825.1 cmsearch exon 2117335 2120256 . - . ID=exon-PYH62_10685-1;Parent=rna-PYH62_10685;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_10685;product=23S ribosomal RNA CP118825.1 Genbank gene 2120557 2122107 . - . ID=gene-PYH62_10690;Name=PYH62_10690;gbkey=Gene;gene_biotype=rRNA;locus_tag=PYH62_10690 CP118825.1 cmsearch rRNA 2120557 2122107 . - . ID=rna-PYH62_10690;Parent=gene-PYH62_10690;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_10690;product=16S ribosomal RNA CP118825.1 cmsearch exon 2120557 2122107 . - . ID=exon-PYH62_10690-1;Parent=rna-PYH62_10690;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_10690;product=16S ribosomal RNA CP118825.1 Genbank gene 2122633 2123229 . - . ID=gene-PYH62_10695;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=PYH62_10695 CP118825.1 Protein Homology CDS 2122633 2123229 . - 0 ID=cds-WHI79198.1;Parent=gene-PYH62_10695;Dbxref=NCBI_GP:WHI79198.1;Name=WHI79198.1;Ontology_term=GO:0006281,GO:0006310;gbkey=CDS;gene=recR;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009383386.1;locus_tag=PYH62_10695;product=recombination mediator RecR;protein_id=WHI79198.1;transl_table=11 CP118825.1 Genbank gene 2123237 2123554 . - . ID=gene-PYH62_10700;Name=PYH62_10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10700 CP118825.1 Protein Homology CDS 2123237 2123554 . - 0 ID=cds-WHI80277.1;Parent=gene-PYH62_10700;Dbxref=NCBI_GP:WHI80277.1;Name=WHI80277.1;Ontology_term=GO:0008150,GO:0003677,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=biological_process|0008150||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002479279.1;locus_tag=PYH62_10700;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WHI80277.1;transl_table=11 CP118825.1 Genbank gene 2123681 2125390 . - . ID=gene-PYH62_10705;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=PYH62_10705 CP118825.1 Protein Homology CDS 2123681 2125390 . - 0 ID=cds-WHI79199.1;Parent=gene-PYH62_10705;Dbxref=NCBI_GP:WHI79199.1;Name=WHI79199.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175207.1;locus_tag=PYH62_10705;product=DNA polymerase III subunit gamma/tau;protein_id=WHI79199.1;transl_table=11 CP118825.1 Genbank gene 2125463 2125981 . - . ID=gene-PYH62_10710;Name=PYH62_10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10710 CP118825.1 Protein Homology CDS 2125463 2125981 . - 0 ID=cds-WHI79200.1;Parent=gene-PYH62_10710;Dbxref=NCBI_GP:WHI79200.1;Name=WHI79200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834724.1;locus_tag=PYH62_10710;product=N-acetyltransferase;protein_id=WHI79200.1;transl_table=11 CP118825.1 Genbank gene 2126298 2126567 . - . ID=gene-PYH62_10715;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=PYH62_10715 CP118825.1 cmsearch SRP_RNA 2126298 2126567 . - . ID=rna-PYH62_10715;Parent=gene-PYH62_10715;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_10715;product=signal recognition particle sRNA large type CP118825.1 cmsearch exon 2126298 2126567 . - . ID=exon-PYH62_10715-1;Parent=rna-PYH62_10715;Dbxref=RFAM:RF01854;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.4;locus_tag=PYH62_10715;product=signal recognition particle sRNA large type CP118825.1 Genbank gene 2126664 2127389 . - . ID=gene-PYH62_10720;Name=treR;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=PYH62_10720 CP118825.1 Protein Homology CDS 2126664 2127389 . - 0 ID=cds-WHI79201.1;Parent=gene-PYH62_10720;Dbxref=NCBI_GP:WHI79201.1;Name=WHI79201.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=treR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447948.1;locus_tag=PYH62_10720;product=trehalose operon repressor;protein_id=WHI79201.1;transl_table=11 CP118825.1 Genbank gene 2127412 2129049 . - . ID=gene-PYH62_10725;Name=treC;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=PYH62_10725 CP118825.1 Protein Homology CDS 2127412 2129049 . - 0 ID=cds-WHI79202.1;Parent=gene-PYH62_10725;Dbxref=NCBI_GP:WHI79202.1;Name=WHI79202.1;Ontology_term=GO:0005991,GO:0008788;gbkey=CDS;gene=treC;go_function=alpha%2Calpha-phosphotrehalase activity|0008788||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454507.1;locus_tag=PYH62_10725;product=alpha%2Calpha-phosphotrehalase;protein_id=WHI79202.1;transl_table=11 CP118825.1 Genbank gene 2129128 2130570 . - . ID=gene-PYH62_10730;Name=treP;gbkey=Gene;gene=treP;gene_biotype=protein_coding;locus_tag=PYH62_10730 CP118825.1 Protein Homology CDS 2129128 2130570 . - 0 ID=cds-WHI79203.1;Parent=gene-PYH62_10730;Dbxref=NCBI_GP:WHI79203.1;Name=WHI79203.1;Ontology_term=GO:0009401,GO:0015771,GO:0008982,GO:0015574,GO:0016020;gbkey=CDS;gene=treP;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,trehalose transmembrane transporter activity|0015574||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,trehalose transport|0015771||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830717.1;locus_tag=PYH62_10730;product=PTS system trehalose-specific EIIBC component;protein_id=WHI79203.1;transl_table=11 CP118825.1 Genbank gene 2130747 2130839 . - . ID=gene-PYH62_10735;Name=PYH62_10735;gbkey=Gene;gene_biotype=tRNA;locus_tag=PYH62_10735 CP118825.1 tRNAscan-SE tRNA 2130747 2130839 . - . ID=rna-PYH62_10735;Parent=gene-PYH62_10735;anticodon=(pos:complement(2130801..2130803));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_10735;product=tRNA-Ser CP118825.1 tRNAscan-SE exon 2130747 2130839 . - . ID=exon-PYH62_10735-1;Parent=rna-PYH62_10735;anticodon=(pos:complement(2130801..2130803));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=PYH62_10735;product=tRNA-Ser CP118825.1 Genbank gene 2130898 2132361 . - . ID=gene-PYH62_10740;Name=PYH62_10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10740 CP118825.1 Protein Homology CDS 2130898 2132361 . - 0 ID=cds-WHI79204.1;Parent=gene-PYH62_10740;Dbxref=NCBI_GP:WHI79204.1;Name=WHI79204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488119.1;locus_tag=PYH62_10740;product=glutamate synthase subunit beta;protein_id=WHI79204.1;transl_table=11 CP118825.1 Genbank gene 2132380 2136888 . - . ID=gene-PYH62_10745;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=PYH62_10745 CP118825.1 Protein Homology CDS 2132380 2136888 . - 0 ID=cds-WHI79205.1;Parent=gene-PYH62_10745;Dbxref=NCBI_GP:WHI79205.1;Name=WHI79205.1;Ontology_term=GO:0006537,GO:0006807,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,nitrogen compound metabolic process|0006807||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499018.1;locus_tag=PYH62_10745;product=glutamate synthase large subunit;protein_id=WHI79205.1;transl_table=11 CP118825.1 Genbank gene 2137039 2137935 . + . ID=gene-PYH62_10750;Name=PYH62_10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10750 CP118825.1 Protein Homology CDS 2137039 2137935 . + 0 ID=cds-WHI79206.1;Parent=gene-PYH62_10750;Dbxref=NCBI_GP:WHI79206.1;Name=WHI79206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000403919.1;locus_tag=PYH62_10750;product=LysR family transcriptional regulator;protein_id=WHI79206.1;transl_table=11 CP118825.1 Genbank gene 2138058 2139173 . + . ID=gene-PYH62_10755;Name=PYH62_10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10755 CP118825.1 Protein Homology CDS 2138058 2139173 . + 0 ID=cds-WHI80278.1;Parent=gene-PYH62_10755;Dbxref=NCBI_GP:WHI80278.1;Name=WHI80278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491705.1;locus_tag=PYH62_10755;product=YibE/F family protein;protein_id=WHI80278.1;transl_table=11 CP118825.1 Genbank gene 2139170 2139976 . + . ID=gene-PYH62_10760;Name=PYH62_10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10760 CP118825.1 Protein Homology CDS 2139170 2139976 . + 0 ID=cds-WHI79207.1;Parent=gene-PYH62_10760;Dbxref=NCBI_GP:WHI79207.1;Name=WHI79207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488096.1;locus_tag=PYH62_10760;product=YibE/F family protein;protein_id=WHI79207.1;transl_table=11 CP118825.1 Genbank gene 2140043 2140426 . - . ID=gene-PYH62_10765;Name=PYH62_10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10765 CP118825.1 Protein Homology CDS 2140043 2140426 . - 0 ID=cds-WHI79208.1;Parent=gene-PYH62_10765;Dbxref=NCBI_GP:WHI79208.1;Name=WHI79208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448000.1;locus_tag=PYH62_10765;product=NUDIX domain-containing protein;protein_id=WHI79208.1;transl_table=11 CP118825.1 Genbank gene 2140577 2140846 . + . ID=gene-PYH62_10770;Name=PYH62_10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10770 CP118825.1 Protein Homology CDS 2140577 2140846 . + 0 ID=cds-WHI79209.1;Parent=gene-PYH62_10770;Dbxref=NCBI_GP:WHI79209.1;Name=WHI79209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276795.1;locus_tag=PYH62_10770;product=hypothetical protein;protein_id=WHI79209.1;transl_table=11 CP118825.1 Genbank gene 2141076 2142065 . - . ID=gene-PYH62_10775;Name=PYH62_10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10775 CP118825.1 Protein Homology CDS 2141076 2142065 . - 0 ID=cds-WHI79210.1;Parent=gene-PYH62_10775;Dbxref=NCBI_GP:WHI79210.1;Name=WHI79210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276796.1;locus_tag=PYH62_10775;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WHI79210.1;transl_table=11 CP118825.1 Genbank gene 2142542 2143384 . - . ID=gene-PYH62_10780;Name=gmpC;gbkey=Gene;gene=gmpC;gene_biotype=protein_coding;locus_tag=PYH62_10780 CP118825.1 Protein Homology CDS 2142542 2143384 . - 0 ID=cds-WHI79211.1;Parent=gene-PYH62_10780;Dbxref=NCBI_GP:WHI79211.1;Name=WHI79211.1;gbkey=CDS;gene=gmpC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002492176.1;locus_tag=PYH62_10780;product=dipeptide ABC transporter glycylmethionine-binding lipoprotein;protein_id=WHI79211.1;transl_table=11 CP118825.1 Genbank pseudogene 2143426 2144086 . - . ID=gene-PYH62_10785;Name=PYH62_10785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_10785;pseudo=true CP118825.1 Protein Homology CDS 2143426 2144086 . - 0 ID=cds-PYH62_10785;Parent=gene-PYH62_10785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499009.1;locus_tag=PYH62_10785;product=ABC transporter permease;pseudo=true;transl_table=11 CP118825.1 Genbank gene 2144087 2145109 . - . ID=gene-PYH62_10790;Name=PYH62_10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10790 CP118825.1 Protein Homology CDS 2144087 2145109 . - 0 ID=cds-WHI79212.1;Parent=gene-PYH62_10790;Dbxref=NCBI_GP:WHI79212.1;Name=WHI79212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447973.1;locus_tag=PYH62_10790;product=methionine ABC transporter ATP-binding protein;protein_id=WHI79212.1;transl_table=11 CP118825.1 Genbank gene 2145329 2146477 . - . ID=gene-PYH62_10795;Name=PYH62_10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10795 CP118825.1 Protein Homology CDS 2145329 2146477 . - 0 ID=cds-WHI79213.1;Parent=gene-PYH62_10795;Dbxref=NCBI_GP:WHI79213.1;Name=WHI79213.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447960.1;locus_tag=PYH62_10795;product=bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase;protein_id=WHI79213.1;transl_table=11 CP118825.1 Genbank gene 2146480 2147376 . - . ID=gene-PYH62_10800;Name=PYH62_10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10800 CP118825.1 Protein Homology CDS 2146480 2147376 . - 0 ID=cds-WHI79214.1;Parent=gene-PYH62_10800;Dbxref=NCBI_GP:WHI79214.1;Name=WHI79214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447971.1;locus_tag=PYH62_10800;product=cysteine synthase family protein;protein_id=WHI79214.1;transl_table=11 CP118825.1 Genbank gene 2147632 2148162 . + . ID=gene-PYH62_10805;Name=PYH62_10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10805 CP118825.1 Protein Homology CDS 2147632 2148162 . + 0 ID=cds-WHI80279.1;Parent=gene-PYH62_10805;Dbxref=NCBI_GP:WHI80279.1;Name=WHI80279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175191.1;locus_tag=PYH62_10805;product=pentapeptide repeat-containing protein;protein_id=WHI80279.1;transl_table=11 CP118825.1 Genbank gene 2148237 2149565 . - . ID=gene-PYH62_10810;Name=PYH62_10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10810 CP118825.1 Protein Homology CDS 2148237 2149565 . - 0 ID=cds-WHI79215.1;Parent=gene-PYH62_10810;Dbxref=NCBI_GP:WHI79215.1;Name=WHI79215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502697.1;locus_tag=PYH62_10810;product=sodium-dependent transporter;protein_id=WHI79215.1;transl_table=11 CP118825.1 Genbank gene 2149729 2149977 . - . ID=gene-PYH62_10815;Name=PYH62_10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10815 CP118825.1 Protein Homology CDS 2149729 2149977 . - 0 ID=cds-WHI79216.1;Parent=gene-PYH62_10815;Dbxref=NCBI_GP:WHI79216.1;Name=WHI79216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175189.1;locus_tag=PYH62_10815;product=hypothetical protein;protein_id=WHI79216.1;transl_table=11 CP118825.1 Genbank gene 2149990 2150721 . - . ID=gene-PYH62_10820;Name=PYH62_10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10820 CP118825.1 Protein Homology CDS 2149990 2150721 . - 0 ID=cds-WHI79217.1;Parent=gene-PYH62_10820;Dbxref=NCBI_GP:WHI79217.1;Name=WHI79217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454520.1;locus_tag=PYH62_10820;product=alpha/beta hydrolase;protein_id=WHI79217.1;transl_table=11 CP118825.1 Genbank gene 2150766 2151437 . - . ID=gene-PYH62_10825;Name=PYH62_10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10825 CP118825.1 Protein Homology CDS 2150766 2151437 . - 0 ID=cds-WHI79218.1;Parent=gene-PYH62_10825;Dbxref=NCBI_GP:WHI79218.1;Name=WHI79218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454521.1;locus_tag=PYH62_10825;product=phosphatase PAP2 family protein;protein_id=WHI79218.1;transl_table=11 CP118825.1 Genbank gene 2151801 2152163 . - . ID=gene-PYH62_10830;Name=PYH62_10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10830 CP118825.1 Protein Homology CDS 2151801 2152163 . - 0 ID=cds-WHI79219.1;Parent=gene-PYH62_10830;Dbxref=NCBI_GP:WHI79219.1;Name=WHI79219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_499000.1;locus_tag=PYH62_10830;product=DUF2294 domain-containing protein;protein_id=WHI79219.1;transl_table=11 CP118825.1 Genbank gene 2152232 2154793 . - . ID=gene-PYH62_10835;Name=PYH62_10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10835 CP118825.1 Protein Homology CDS 2152232 2154793 . - 0 ID=cds-WHI79220.1;Parent=gene-PYH62_10835;Dbxref=NCBI_GP:WHI79220.1;Name=WHI79220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175186.1;locus_tag=PYH62_10835;product=Na-translocating system protein MpsB;protein_id=WHI79220.1;transl_table=11 CP118825.1 Genbank gene 2154809 2156308 . - . ID=gene-PYH62_10840;Name=PYH62_10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10840 CP118825.1 Protein Homology CDS 2154809 2156308 . - 0 ID=cds-WHI79221.1;Parent=gene-PYH62_10840;Dbxref=NCBI_GP:WHI79221.1;Name=WHI79221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175185.1;locus_tag=PYH62_10840;product=NADH dehydrogenase subunit 5;protein_id=WHI79221.1;transl_table=11 CP118825.1 Genbank gene 2156941 2157624 . + . ID=gene-PYH62_10845;Name=PYH62_10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10845 CP118825.1 Protein Homology CDS 2156941 2157624 . + 0 ID=cds-WHI79222.1;Parent=gene-PYH62_10845;Dbxref=NCBI_GP:WHI79222.1;Name=WHI79222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175184.1;locus_tag=PYH62_10845;product=phosphatase PAP2 family protein;protein_id=WHI79222.1;transl_table=11 CP118825.1 Genbank gene 2157725 2159266 . - . ID=gene-PYH62_10850;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=PYH62_10850 CP118825.1 Protein Homology CDS 2157725 2159266 . - 0 ID=cds-WHI79223.1;Parent=gene-PYH62_10850;Dbxref=NCBI_GP:WHI79223.1;Name=WHI79223.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019166941.1;locus_tag=PYH62_10850;product=glutamine-hydrolyzing GMP synthase;protein_id=WHI79223.1;transl_table=11 CP118825.1 Genbank gene 2159413 2160879 . - . ID=gene-PYH62_10855;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=PYH62_10855 CP118825.1 Protein Homology CDS 2159413 2160879 . - 0 ID=cds-WHI79224.1;Parent=gene-PYH62_10855;Dbxref=NCBI_GP:WHI79224.1;Name=WHI79224.1;Ontology_term=GO:0009152,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002955225.1;locus_tag=PYH62_10855;product=IMP dehydrogenase;protein_id=WHI79224.1;transl_table=11 CP118825.1 Genbank gene 2160918 2162186 . - . ID=gene-PYH62_10860;Name=PYH62_10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10860 CP118825.1 Protein Homology CDS 2160918 2162186 . - 0 ID=cds-WHI79225.1;Parent=gene-PYH62_10860;Dbxref=NCBI_GP:WHI79225.1;Name=WHI79225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000793018.1;locus_tag=PYH62_10860;product=nucleobase:cation symporter-2 family protein;protein_id=WHI79225.1;transl_table=11 CP118825.1 Genbank pseudogene 2162183 2162763 . - . ID=gene-PYH62_10865;Name=xpt;gbkey=Gene;gene=xpt;gene_biotype=pseudogene;locus_tag=PYH62_10865;pseudo=true CP118825.1 Protein Homology CDS 2162183 2162763 . - 0 ID=cds-PYH62_10865;Parent=gene-PYH62_10865;Note=frameshifted;Ontology_term=GO:0046110,GO:0000310;gbkey=CDS;gene=xpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=xanthine metabolic process|0046110||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175180.1;locus_tag=PYH62_10865;product=xanthine phosphoribosyltransferase;pseudo=true;transl_table=11 CP118825.1 cmsearch riboswitch 2162971 2163073 . - . ID=id-CP118825.1:2162971..2163073;Dbxref=RFAM:RF00167;Note=purine riboswitch;bound_moiety=guanine and/or adenine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.4;regulatory_class=riboswitch CP118825.1 Genbank gene 2163287 2163694 . + . ID=gene-PYH62_10870;Name=PYH62_10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10870 CP118825.1 Protein Homology CDS 2163287 2163694 . + 0 ID=cds-WHI79226.1;Parent=gene-PYH62_10870;Dbxref=NCBI_GP:WHI79226.1;Name=WHI79226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276832.1;locus_tag=PYH62_10870;product=general stress protein;protein_id=WHI79226.1;transl_table=11 CP118825.1 Genbank gene 2163910 2164569 . + . ID=gene-PYH62_10875;Name=PYH62_10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10875 CP118825.1 Protein Homology CDS 2163910 2164569 . + 0 ID=cds-WHI79227.1;Parent=gene-PYH62_10875;Dbxref=NCBI_GP:WHI79227.1;Name=WHI79227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834714.1;locus_tag=PYH62_10875;product=hypothetical protein;protein_id=WHI79227.1;transl_table=11 CP118825.1 Genbank gene 2164698 2165336 . + . ID=gene-PYH62_10880;Name=PYH62_10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10880 CP118825.1 Protein Homology CDS 2164698 2165336 . + 0 ID=cds-WHI79228.1;Parent=gene-PYH62_10880;Dbxref=NCBI_GP:WHI79228.1;Name=WHI79228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447978.1;locus_tag=PYH62_10880;product=DNA-binding protein;protein_id=WHI79228.1;transl_table=11 CP118825.1 Genbank gene 2165553 2166944 . + . ID=gene-PYH62_10885;Name=PYH62_10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10885 CP118825.1 Protein Homology CDS 2165553 2166944 . + 0 ID=cds-WHI79229.1;Parent=gene-PYH62_10885;Dbxref=NCBI_GP:WHI79229.1;Name=WHI79229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448009.1;locus_tag=PYH62_10885;product=L-cystine transporter;protein_id=WHI79229.1;transl_table=11 CP118825.1 Genbank gene 2167001 2167756 . - . ID=gene-PYH62_10890;Name=PYH62_10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10890 CP118825.1 Protein Homology CDS 2167001 2167756 . - 0 ID=cds-WHI79230.1;Parent=gene-PYH62_10890;Dbxref=NCBI_GP:WHI79230.1;Name=WHI79230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276836.1;locus_tag=PYH62_10890;product=NADPH-dependent oxidoreductase;protein_id=WHI79230.1;transl_table=11 CP118825.1 Genbank gene 2167912 2168691 . + . ID=gene-PYH62_10895;Name=PYH62_10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10895 CP118825.1 Protein Homology CDS 2167912 2168691 . + 0 ID=cds-WHI79231.1;Parent=gene-PYH62_10895;Dbxref=NCBI_GP:WHI79231.1;Name=WHI79231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448003.1;locus_tag=PYH62_10895;product=2-keto-4-pentenoate hydratase;protein_id=WHI79231.1;transl_table=11 CP118825.1 Genbank gene 2169094 2169663 . + . ID=gene-PYH62_10900;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=PYH62_10900 CP118825.1 Protein Homology CDS 2169094 2169663 . + 0 ID=cds-WHI79232.1;Parent=gene-PYH62_10900;Dbxref=NCBI_GP:WHI79232.1;Name=WHI79232.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445177.1;locus_tag=PYH62_10900;product=alkyl hydroperoxide reductase subunit C;protein_id=WHI79232.1;transl_table=11 CP118825.1 Genbank pseudogene 2169678 2171202 . + . ID=gene-PYH62_10905;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=pseudogene;locus_tag=PYH62_10905;pseudo=true CP118825.1 Protein Homology CDS 2169678 2171202 . + 0 ID=cds-PYH62_10905;Parent=gene-PYH62_10905;Note=frameshifted;Ontology_term=GO:0006805,GO:0009398,GO:0016668;gbkey=CDS;gene=ahpF;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C NAD(P) as acceptor|0016668||IEA;go_process=xenobiotic metabolic process|0006805||IEA,FMN biosynthetic process|0009398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498953.1;locus_tag=PYH62_10905;product=alkyl hydroperoxide reductase subunit F;pseudo=true;transl_table=11 CP118825.1 Genbank gene 2171451 2172080 . + . ID=gene-PYH62_10910;Name=PYH62_10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10910 CP118825.1 Protein Homology CDS 2171451 2172080 . + 0 ID=cds-WHI79233.1;Parent=gene-PYH62_10910;Dbxref=NCBI_GP:WHI79233.1;Name=WHI79233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000746683.1;locus_tag=PYH62_10910;product=NDxxF motif lipoprotein;protein_id=WHI79233.1;transl_table=11 CP118825.1 Genbank gene 2172177 2172755 . - . ID=gene-PYH62_10915;Name=PYH62_10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10915 CP118825.1 Protein Homology CDS 2172177 2172755 . - 0 ID=cds-WHI79234.1;Parent=gene-PYH62_10915;Dbxref=NCBI_GP:WHI79234.1;Name=WHI79234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488113.1;locus_tag=PYH62_10915;product=phosphoglycerate mutase family protein;protein_id=WHI79234.1;transl_table=11 CP118825.1 Genbank gene 2173033 2173281 . - . ID=gene-PYH62_10920;Name=PYH62_10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10920 CP118825.1 Protein Homology CDS 2173033 2173281 . - 0 ID=cds-WHI79235.1;Parent=gene-PYH62_10920;Dbxref=NCBI_GP:WHI79235.1;Name=WHI79235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447983.1;locus_tag=PYH62_10920;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WHI79235.1;transl_table=11 CP118825.1 Genbank gene 2173602 2173859 . + . ID=gene-PYH62_10925;Name=PYH62_10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10925 CP118825.1 Protein Homology CDS 2173602 2173859 . + 0 ID=cds-WHI79236.1;Parent=gene-PYH62_10925;Dbxref=NCBI_GP:WHI79236.1;Name=WHI79236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461107.1;locus_tag=PYH62_10925;product=helix-turn-helix transcriptional regulator;protein_id=WHI79236.1;transl_table=11 CP118825.1 Genbank gene 2173918 2174862 . - . ID=gene-PYH62_10930;Name=PYH62_10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10930 CP118825.1 Protein Homology CDS 2173918 2174862 . - 0 ID=cds-WHI79237.1;Parent=gene-PYH62_10930;Dbxref=NCBI_GP:WHI79237.1;Name=WHI79237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175675.1;locus_tag=PYH62_10930;product=hypothetical protein;protein_id=WHI79237.1;transl_table=11 CP118825.1 Genbank gene 2175045 2175287 . - . ID=gene-PYH62_10935;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=PYH62_10935 CP118825.1 Protein Homology CDS 2175045 2175287 . - 0 ID=cds-WHI79238.1;Parent=gene-PYH62_10935;Dbxref=NCBI_GP:WHI79238.1;Name=WHI79238.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447994.1;locus_tag=PYH62_10935;product=30S ribosomal protein S18;protein_id=WHI79238.1;transl_table=11 CP118825.1 Genbank gene 2175329 2175841 . - . ID=gene-PYH62_10940;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=PYH62_10940 CP118825.1 Protein Homology CDS 2175329 2175841 . - 0 ID=cds-WHI79239.1;Parent=gene-PYH62_10940;Dbxref=NCBI_GP:WHI79239.1;Name=WHI79239.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498938.1;locus_tag=PYH62_10940;product=single-stranded DNA-binding protein;protein_id=WHI79239.1;transl_table=11 CP118825.1 Genbank pseudogene 2175863 2176160 . - . ID=gene-PYH62_10945;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=pseudogene;locus_tag=PYH62_10945;pseudo=true CP118825.1 Protein Homology CDS 2175863 2176160 . - 0 ID=cds-PYH62_10945;Parent=gene-PYH62_10945;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831345.1;locus_tag=PYH62_10945;product=30S ribosomal protein S6;pseudo=true;transl_table=11 CP118825.1 Genbank gene 2176408 2176599 . + . ID=gene-PYH62_10950;Name=PYH62_10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10950 CP118825.1 Protein Homology CDS 2176408 2176599 . + 0 ID=cds-WHI79240.1;Parent=gene-PYH62_10950;Dbxref=NCBI_GP:WHI79240.1;Name=WHI79240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_498936.1;locus_tag=PYH62_10950;product=hypothetical protein;protein_id=WHI79240.1;transl_table=11 CP118825.1 Genbank gene 2176669 2177766 . - . ID=gene-PYH62_10955;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=PYH62_10955 CP118825.1 Protein Homology CDS 2176669 2177766 . - 0 ID=cds-WHI79241.1;Parent=gene-PYH62_10955;Dbxref=NCBI_GP:WHI79241.1;Name=WHI79241.1;Ontology_term=GO:0005525;gbkey=CDS;gene=ychF;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019469841.1;locus_tag=PYH62_10955;product=redox-regulated ATPase YchF;protein_id=WHI79241.1;transl_table=11 CP118825.1 Genbank gene 2177778 2177981 . - . ID=gene-PYH62_10960;Name=PYH62_10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10960 CP118825.1 Protein Homology CDS 2177778 2177981 . - 0 ID=cds-WHI79242.1;Parent=gene-PYH62_10960;Dbxref=NCBI_GP:WHI79242.1;Name=WHI79242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831361.1;locus_tag=PYH62_10960;product=DUF951 domain-containing protein;protein_id=WHI79242.1;transl_table=11 CP118825.1 Genbank gene 2178002 2178880 . - . ID=gene-PYH62_10965;Name=PYH62_10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10965 CP118825.1 Protein Homology CDS 2178002 2178880 . - 0 ID=cds-WHI79243.1;Parent=gene-PYH62_10965;Dbxref=NCBI_GP:WHI79243.1;Name=WHI79243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002448012.1;locus_tag=PYH62_10965;product=mechanosensitive ion channel family protein;protein_id=WHI79243.1;transl_table=11 CP118825.1 Genbank gene 2179010 2179834 . - . ID=gene-PYH62_10970;Name=PYH62_10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10970 CP118825.1 Protein Homology CDS 2179010 2179834 . - 0 ID=cds-WHI79244.1;Parent=gene-PYH62_10970;Dbxref=NCBI_GP:WHI79244.1;Name=WHI79244.1;Ontology_term=GO:0000910,GO:0007059,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=cytokinesis|0000910||IEA,chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002488097.1;locus_tag=PYH62_10970;product=ParB/RepB/Spo0J family partition protein;protein_id=WHI79244.1;transl_table=11 CP118825.1 cmsearch binding_site 2180060 2180450 . + . ID=id-CP118825.1:2180060..2180450;Dbxref=RFAM:RF00230;Note=T-box leader;bound_moiety=tRNA;gbkey=misc_binding;inference=COORDINATES: profile:INFERNAL:1.1.4 CP118825.1 Genbank gene 2180518 2181621 . + . ID=gene-PYH62_10975;Name=PYH62_10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10975 CP118825.1 Protein Homology CDS 2180518 2181621 . + 0 ID=cds-WHI79245.1;Parent=gene-PYH62_10975;Dbxref=NCBI_GP:WHI79245.1;Name=WHI79245.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002486191.1;locus_tag=PYH62_10975;product=PLP-dependent transferase;protein_id=WHI79245.1;transl_table=11 CP118825.1 Genbank gene 2181618 2182793 . + . ID=gene-PYH62_10980;Name=PYH62_10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10980 CP118825.1 Protein Homology CDS 2181618 2182793 . + 0 ID=cds-WHI79246.1;Parent=gene-PYH62_10980;Dbxref=NCBI_GP:WHI79246.1;Name=WHI79246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002499194.1;locus_tag=PYH62_10980;product=PLP-dependent aspartate aminotransferase family protein;protein_id=WHI79246.1;transl_table=11 CP118825.1 Genbank gene 2182747 2184585 . + . ID=gene-PYH62_10985;Name=PYH62_10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10985 CP118825.1 Protein Homology CDS 2182747 2184585 . + 0 ID=cds-WHI79247.1;Parent=gene-PYH62_10985;Dbxref=NCBI_GP:WHI79247.1;Name=WHI79247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447975.1;locus_tag=PYH62_10985;product=bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase;protein_id=WHI79247.1;transl_table=11 CP118825.1 Genbank gene 2184582 2186828 . + . ID=gene-PYH62_10990;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=PYH62_10990 CP118825.1 Protein Homology CDS 2184582 2186828 . + 0 ID=cds-WHI79248.1;Parent=gene-PYH62_10990;Dbxref=NCBI_GP:WHI79248.1;Name=WHI79248.1;Ontology_term=GO:0009086,GO:0003871;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447984.1;locus_tag=PYH62_10990;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WHI79248.1;transl_table=11 CP118825.1 Genbank gene 2186907 2187653 . + . ID=gene-PYH62_10995;Name=PYH62_10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_10995 CP118825.1 Protein Homology CDS 2186907 2187653 . + 0 ID=cds-WHI79249.1;Parent=gene-PYH62_10995;Dbxref=NCBI_GP:WHI79249.1;Name=WHI79249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175665.1;locus_tag=PYH62_10995;product=cyclase family protein;protein_id=WHI79249.1;transl_table=11 CP118825.1 Genbank pseudogene 2187763 2187879 . - . ID=gene-PYH62_11000;Name=PYH62_11000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_11000;pseudo=true CP118825.1 Protein Homology CDS 2187763 2187879 . - 0 ID=cds-PYH62_11000;Parent=gene-PYH62_11000;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454541.1;locus_tag=PYH62_11000;product=RimJ/RimL family protein N-acetyltransferase;pseudo=true;transl_table=11 CP118825.1 Genbank pseudogene 2187907 2188229 . - . ID=gene-PYH62_11005;Name=PYH62_11005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_11005;pseudo=true CP118825.1 Protein Homology CDS 2187907 2188229 . - 0 ID=cds-PYH62_11005;Parent=gene-PYH62_11005;Note=frameshifted%3B incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011274538.1;locus_tag=PYH62_11005;product=MFS transporter;pseudo=true;transl_table=11 CP118825.1 Genbank pseudogene 2188269 2189865 . - . ID=gene-PYH62_11010;Name=PYH62_11010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_11010;pseudo=true CP118825.1 Protein Homology CDS 2188269 2189865 . - 0 ID=cds-PYH62_11010;Parent=gene-PYH62_11010;Note=frameshifted;Ontology_term=GO:0005975,GO:0016773;gbkey=CDS;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175662.1;locus_tag=PYH62_11010;product=FGGY-family carbohydrate kinase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 2190172 2190531 . + . ID=gene-PYH62_11015;Name=PYH62_11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11015 CP118825.1 Protein Homology CDS 2190172 2190531 . + 0 ID=cds-WHI80280.1;Parent=gene-PYH62_11015;Dbxref=NCBI_GP:WHI80280.1;Name=WHI80280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002434158.1;locus_tag=PYH62_11015;product=DUF4870 domain-containing protein;protein_id=WHI80280.1;transl_table=11 CP118825.1 Genbank gene 2190607 2190936 . - . ID=gene-PYH62_11020;Name=PYH62_11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11020 CP118825.1 Protein Homology CDS 2190607 2190936 . - 0 ID=cds-WHI79250.1;Parent=gene-PYH62_11020;Dbxref=NCBI_GP:WHI79250.1;Name=WHI79250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002470711.1;locus_tag=PYH62_11020;product=hypothetical protein;protein_id=WHI79250.1;transl_table=11 CP118825.1 Genbank gene 2191137 2191511 . - . ID=gene-PYH62_11025;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=PYH62_11025 CP118825.1 Protein Homology CDS 2191137 2191511 . - 0 ID=cds-WHI79251.1;Parent=gene-PYH62_11025;Dbxref=NCBI_GP:WHI79251.1;Name=WHI79251.1;Ontology_term=GO:0047324;gbkey=CDS;gene=dhaM;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001830585.1;locus_tag=PYH62_11025;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WHI79251.1;transl_table=11 CP118825.1 Genbank gene 2191508 2192089 . - . ID=gene-PYH62_11030;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=PYH62_11030 CP118825.1 Protein Homology CDS 2191508 2192089 . - 0 ID=cds-WHI79252.1;Parent=gene-PYH62_11030;Dbxref=NCBI_GP:WHI79252.1;Name=WHI79252.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaL;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834704.1;locus_tag=PYH62_11030;product=dihydroxyacetone kinase subunit DhaL;protein_id=WHI79252.1;transl_table=11 CP118825.1 Genbank pseudogene 2192121 2193082 . - . ID=gene-PYH62_11035;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=pseudogene;locus_tag=PYH62_11035;pseudo=true CP118825.1 Protein Homology CDS 2192121 2193082 . - 0 ID=cds-PYH62_11035;Parent=gene-PYH62_11035;Note=frameshifted;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020361079.1;locus_tag=PYH62_11035;product=dihydroxyacetone kinase subunit DhaK;pseudo=true;transl_table=11 CP118825.1 Genbank gene 2193277 2194389 . - . ID=gene-PYH62_11040;Name=PYH62_11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11040 CP118825.1 Protein Homology CDS 2193277 2194389 . - 0 ID=cds-WHI79253.1;Parent=gene-PYH62_11040;Dbxref=NCBI_GP:WHI79253.1;Name=WHI79253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019834702.1;locus_tag=PYH62_11040;product=glycerol dehydrogenase;protein_id=WHI79253.1;transl_table=11 CP118825.1 Genbank gene 2194967 2195509 . - . ID=gene-PYH62_11045;Name=PYH62_11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11045 CP118825.1 Protein Homology CDS 2194967 2195509 . - 0 ID=cds-WHI80281.1;Parent=gene-PYH62_11045;Dbxref=NCBI_GP:WHI80281.1;Name=WHI80281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175655.1;locus_tag=PYH62_11045;product=GNAT family protein;protein_id=WHI80281.1;transl_table=11 CP118825.1 Genbank gene 2195691 2196533 . - . ID=gene-PYH62_11050;Name=PYH62_11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11050 CP118825.1 Protein Homology CDS 2195691 2196533 . - 0 ID=cds-WHI79254.1;Parent=gene-PYH62_11050;Dbxref=NCBI_GP:WHI79254.1;Name=WHI79254.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025612.2;locus_tag=PYH62_11050;product=AbiH family protein;protein_id=WHI79254.1;transl_table=11 CP118825.1 Genbank gene 2196558 2197097 . - . ID=gene-PYH62_11055;Name=PYH62_11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11055 CP118825.1 GeneMarkS-2+ CDS 2196558 2197097 . - 0 ID=cds-WHI79255.1;Parent=gene-PYH62_11055;Dbxref=NCBI_GP:WHI79255.1;Name=WHI79255.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_11055;product=hypothetical protein;protein_id=WHI79255.1;transl_table=11 CP118825.1 Genbank gene 2197100 2198704 . - . ID=gene-PYH62_11060;Name=PYH62_11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11060 CP118825.1 Protein Homology CDS 2197100 2198704 . - 0 ID=cds-WHI79256.1;Parent=gene-PYH62_11060;Dbxref=NCBI_GP:WHI79256.1;Name=WHI79256.1;Ontology_term=GO:0006306,GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;go_process=DNA methylation|0006306||IEA;inference=COORDINATES: protein motif:HMM:NF014442.2;locus_tag=PYH62_11060;product=N-6 DNA methylase;protein_id=WHI79256.1;transl_table=11 CP118825.1 Genbank gene 2198844 2200283 . - . ID=gene-PYH62_11065;Name=PYH62_11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11065 CP118825.1 Protein Homology CDS 2198844 2200283 . - 0 ID=cds-WHI79257.1;Parent=gene-PYH62_11065;Dbxref=NCBI_GP:WHI79257.1;Name=WHI79257.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037095.2;locus_tag=PYH62_11065;product=LA2681 family HEPN domain-containing protein;protein_id=WHI79257.1;transl_table=11 CP118825.1 Genbank gene 2200480 2201127 . + . ID=gene-PYH62_11070;Name=PYH62_11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11070 CP118825.1 Protein Homology CDS 2200480 2201127 . + 0 ID=cds-WHI79258.1;Parent=gene-PYH62_11070;Dbxref=NCBI_GP:WHI79258.1;Name=WHI79258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019167443.1;locus_tag=PYH62_11070;product=Cthe_2314 family HEPN domain-containing protein;protein_id=WHI79258.1;transl_table=11 CP118825.1 Genbank gene 2201712 2202476 . - . ID=gene-PYH62_11075;Name=PYH62_11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11075 CP118825.1 Protein Homology CDS 2201712 2202476 . - 0 ID=cds-WHI79259.1;Parent=gene-PYH62_11075;Dbxref=NCBI_GP:WHI79259.1;Name=WHI79259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175649.1;locus_tag=PYH62_11075;product=alpha/beta hydrolase family protein;protein_id=WHI79259.1;transl_table=11 CP118825.1 Genbank gene 2202501 2203160 . - . ID=gene-PYH62_11080;Name=PYH62_11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11080 CP118825.1 Protein Homology CDS 2202501 2203160 . - 0 ID=cds-WHI79260.1;Parent=gene-PYH62_11080;Dbxref=NCBI_GP:WHI79260.1;Name=WHI79260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930948.1;locus_tag=PYH62_11080;product=ABC transporter permease;protein_id=WHI79260.1;transl_table=11 CP118825.1 Genbank gene 2203160 2204110 . - . ID=gene-PYH62_11085;Name=PYH62_11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11085 CP118825.1 Protein Homology CDS 2203160 2204110 . - 0 ID=cds-WHI79261.1;Parent=gene-PYH62_11085;Dbxref=NCBI_GP:WHI79261.1;Name=WHI79261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930947.1;locus_tag=PYH62_11085;product=osmoprotectant ABC transporter substrate-binding protein;protein_id=WHI79261.1;transl_table=11 CP118825.1 Genbank gene 2204129 2204761 . - . ID=gene-PYH62_11090;Name=PYH62_11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11090 CP118825.1 Protein Homology CDS 2204129 2204761 . - 0 ID=cds-WHI79262.1;Parent=gene-PYH62_11090;Dbxref=NCBI_GP:WHI79262.1;Name=WHI79262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502247.1;locus_tag=PYH62_11090;product=ABC transporter permease;protein_id=WHI79262.1;transl_table=11 CP118825.1 Genbank gene 2204758 2205933 . - . ID=gene-PYH62_11095;Name=PYH62_11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11095 CP118825.1 Protein Homology CDS 2204758 2205933 . - 0 ID=cds-WHI79263.1;Parent=gene-PYH62_11095;Dbxref=NCBI_GP:WHI79263.1;Name=WHI79263.1;Note=Members of the family are the ATP-binding subunit of ABC transporters for substrates such as betaine%2C L-proline or other amino acids%2C choline%2C carnitine%2C etc. The substrate specificity is best determined from the substrate-binding subunit%2C rather than this subunit%2C as it interacts with the permease subunit and not with substrate directly.;Ontology_term=GO:0015837,GO:0005524,GO:0009898,GO:0043190;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502248.1;locus_tag=PYH62_11095;product=betaine/proline/choline family ABC transporter ATP-binding protein;protein_id=WHI79263.1;transl_table=11 CP118825.1 Genbank gene 2206066 2206539 . - . ID=gene-PYH62_11100;Name=PYH62_11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11100 CP118825.1 Protein Homology CDS 2206066 2206539 . - 0 ID=cds-WHI79264.1;Parent=gene-PYH62_11100;Dbxref=NCBI_GP:WHI79264.1;Name=WHI79264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930945.1;locus_tag=PYH62_11100;product=thioesterase family protein;protein_id=WHI79264.1;transl_table=11 CP118825.1 Genbank gene 2206544 2207509 . - . ID=gene-PYH62_11105;Name=PYH62_11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11105 CP118825.1 Protein Homology CDS 2206544 2207509 . - 0 ID=cds-WHI79265.1;Parent=gene-PYH62_11105;Dbxref=NCBI_GP:WHI79265.1;Name=WHI79265.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002480199.1;locus_tag=PYH62_11105;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;protein_id=WHI79265.1;transl_table=11 CP118825.1 Genbank pseudogene 2207509 2208394 . - . ID=gene-PYH62_11110;Name=PYH62_11110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_11110;pseudo=true CP118825.1 Protein Homology CDS 2207509 2208394 . - 0 ID=cds-PYH62_11110;Parent=gene-PYH62_11110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502631.1;locus_tag=PYH62_11110;product=3-keto-5-aminohexanoate cleavage protein;pseudo=true;transl_table=11 CP118825.1 Genbank pseudogene 2208547 2209077 . - . ID=gene-PYH62_11115;Name=PYH62_11115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_11115;pseudo=true CP118825.1 Protein Homology CDS 2208547 2209077 . - 0 ID=cds-PYH62_11115;Parent=gene-PYH62_11115;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002491275.1;locus_tag=PYH62_11115;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11 CP118825.1 Genbank pseudogene 2209549 2209698 . - . ID=gene-PYH62_11120;Name=PYH62_11120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_11120;pseudo=true CP118825.1 Protein Homology CDS 2209549 2209698 . - 0 ID=cds-PYH62_11120;Parent=gene-PYH62_11120;Note=incomplete%3B partial on complete genome%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447966.1;locus_tag=PYH62_11120;product=GNAT family protein;pseudo=true;transl_table=11 CP118825.1 Genbank pseudogene 2209722 2211043 . - . ID=gene-PYH62_11125;Name=PYH62_11125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_11125;pseudo=true CP118825.1 Protein Homology CDS 2209722 2211043 . - 0 ID=cds-PYH62_11125;Parent=gene-PYH62_11125;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002328409.1;locus_tag=PYH62_11125;product=ISL3 family transposase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 2211203 2212843 . - . ID=gene-PYH62_11130;Name=merA;gbkey=Gene;gene=merA;gene_biotype=protein_coding;locus_tag=PYH62_11130 CP118825.1 Protein Homology CDS 2211203 2212843 . - 0 ID=cds-WHI79266.1;Parent=gene-PYH62_11130;Dbxref=NCBI_GP:WHI79266.1;Name=WHI79266.1;Ontology_term=GO:0016152;gbkey=CDS;gene=merA;go_function=mercury (II) reductase activity|0016152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001031939.1;locus_tag=PYH62_11130;product=mercury(II) reductase;protein_id=WHI79266.1;transl_table=11 CP118825.1 Genbank gene 2212872 2213264 . - . ID=gene-PYH62_11135;Name=merR;gbkey=Gene;gene=merR;gene_biotype=protein_coding;locus_tag=PYH62_11135 CP118825.1 Protein Homology CDS 2212872 2213264 . - 0 ID=cds-WHI79267.1;Parent=gene-PYH62_11135;Dbxref=NCBI_GP:WHI79267.1;Name=WHI79267.1;Ontology_term=GO:0001228;gbkey=CDS;gene=merR;go_function=DNA-binding transcription activator activity%2C RNA polymerase II-specific|0001228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020220203.1;locus_tag=PYH62_11135;product=Hg(II)-responsive transcriptional regulator;protein_id=WHI79267.1;transl_table=11 CP118825.1 Genbank pseudogene 2213481 2213894 . - . ID=gene-PYH62_11140;Name=PYH62_11140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_11140;pseudo=true CP118825.1 Protein Homology CDS 2213481 2213894 . - 0 ID=cds-PYH62_11140;Parent=gene-PYH62_11140;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505005.1;locus_tag=PYH62_11140;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 CP118825.1 Genbank pseudogene 2213968 2214168 . - . ID=gene-PYH62_11145;Name=PYH62_11145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_11145;pseudo=true CP118825.1 Protein Homology CDS 2213968 2214168 . - 0 ID=cds-PYH62_11145;Parent=gene-PYH62_11145;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505005.1;locus_tag=PYH62_11145;product=RimJ/RimL family protein N-acetyltransferase;pseudo=true;transl_table=11 CP118825.1 Genbank gene 2214352 2215926 . + . ID=gene-PYH62_11150;Name=PYH62_11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11150 CP118825.1 Protein Homology CDS 2214352 2215926 . + 0 ID=cds-WHI79268.1;Parent=gene-PYH62_11150;Dbxref=NCBI_GP:WHI79268.1;Name=WHI79268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454542.1;locus_tag=PYH62_11150;product=BCCT family transporter;protein_id=WHI79268.1;transl_table=11 CP118825.1 Genbank gene 2216154 2216726 . - . ID=gene-PYH62_11155;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=PYH62_11155 CP118825.1 Protein Homology CDS 2216154 2216726 . - 0 ID=cds-WHI79269.1;Parent=gene-PYH62_11155;Dbxref=NCBI_GP:WHI79269.1;Name=WHI79269.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175636.1;locus_tag=PYH62_11155;product=signal peptidase I;protein_id=WHI79269.1;transl_table=11 CP118825.1 Genbank gene 2216933 2217340 . + . ID=gene-PYH62_11160;Name=PYH62_11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11160 CP118825.1 Protein Homology CDS 2216933 2217340 . + 0 ID=cds-WHI79270.1;Parent=gene-PYH62_11160;Dbxref=NCBI_GP:WHI79270.1;Name=WHI79270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276902.1;locus_tag=PYH62_11160;product=YxeA family protein;protein_id=WHI79270.1;transl_table=11 CP118825.1 Genbank gene 2217364 2218122 . + . ID=gene-PYH62_11165;Name=PYH62_11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11165 CP118825.1 Protein Homology CDS 2217364 2218122 . + 0 ID=cds-WHI79271.1;Parent=gene-PYH62_11165;Dbxref=NCBI_GP:WHI79271.1;Name=WHI79271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831790.1;locus_tag=PYH62_11165;product=ABC transporter ATP-binding protein;protein_id=WHI79271.1;transl_table=11 CP118825.1 Genbank gene 2218112 2219992 . + . ID=gene-PYH62_11170;Name=PYH62_11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11170 CP118825.1 Protein Homology CDS 2218112 2219992 . + 0 ID=cds-WHI79272.1;Parent=gene-PYH62_11170;Dbxref=NCBI_GP:WHI79272.1;Name=WHI79272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002490219.1;locus_tag=PYH62_11170;product=FtsX-like permease family protein;protein_id=WHI79272.1;transl_table=11 CP118825.1 Genbank gene 2220019 2220210 . + . ID=gene-PYH62_11175;Name=PYH62_11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11175 CP118825.1 Protein Homology CDS 2220019 2220210 . + 0 ID=cds-WHI79273.1;Parent=gene-PYH62_11175;Dbxref=NCBI_GP:WHI79273.1;Name=WHI79273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002447970.1;locus_tag=PYH62_11175;product=VraH family protein;protein_id=WHI79273.1;transl_table=11 CP118825.1 Genbank gene 2220253 2220828 . - . ID=gene-PYH62_11180;Name=PYH62_11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11180 CP118825.1 Protein Homology CDS 2220253 2220828 . - 0 ID=cds-WHI79274.1;Parent=gene-PYH62_11180;Dbxref=NCBI_GP:WHI79274.1;Name=WHI79274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002454546.1;locus_tag=PYH62_11180;product=helix-turn-helix transcriptional regulator;protein_id=WHI79274.1;transl_table=11 CP118825.1 Genbank gene 2221244 2221786 . - . ID=gene-PYH62_11185;Name=PYH62_11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11185 CP118825.1 Protein Homology CDS 2221244 2221786 . - 0 ID=cds-WHI79275.1;Parent=gene-PYH62_11185;Dbxref=NCBI_GP:WHI79275.1;Name=WHI79275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017175630.1;locus_tag=PYH62_11185;product=TetR/AcrR family transcriptional regulator;protein_id=WHI79275.1;transl_table=11 CP118825.1 Genbank gene 2221752 2222147 . - . ID=gene-PYH62_11190;Name=PYH62_11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11190 CP118825.1 Protein Homology CDS 2221752 2222147 . - 0 ID=cds-WHI79276.1;Parent=gene-PYH62_11190;Dbxref=NCBI_GP:WHI79276.1;Name=WHI79276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002502257.1;locus_tag=PYH62_11190;product=DUF3147 family protein;protein_id=WHI79276.1;transl_table=11 CP118825.1 Genbank pseudogene 2222188 2222529 . - . ID=gene-PYH62_11195;Name=PYH62_11195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=PYH62_11195;pseudo=true CP118825.1 Protein Homology CDS 2222188 2222529 . - 0 ID=cds-PYH62_11195;Parent=gene-PYH62_11195;Note=incomplete%3B partial on complete genome%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001831810.1;locus_tag=PYH62_11195;product=DUF3147 family protein;pseudo=true;transl_table=11 CP118825.1 Genbank gene 2222700 2223539 . - . ID=gene-PYH62_11200;Name=noc;gbkey=Gene;gene=noc;gene_biotype=protein_coding;locus_tag=PYH62_11200 CP118825.1 Protein Homology CDS 2222700 2223539 . - 0 ID=cds-WHI79277.1;Parent=gene-PYH62_11200;Dbxref=NCBI_GP:WHI79277.1;Name=WHI79277.1;Ontology_term=GO:0032466,GO:0043565;gbkey=CDS;gene=noc;go_function=sequence-specific DNA binding|0043565||IEA;go_process=negative regulation of cytokinesis|0032466||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501495.1;locus_tag=PYH62_11200;product=nucleoid occlusion protein;protein_id=WHI79277.1;transl_table=11 CP118825.1 Genbank gene 2223593 2224315 . - . ID=gene-PYH62_11205;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=PYH62_11205 CP118825.1 Protein Homology CDS 2223593 2224315 . - 0 ID=cds-WHI79278.1;Parent=gene-PYH62_11205;Dbxref=NCBI_GP:WHI79278.1;Name=WHI79278.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168,GO:0005575;gbkey=CDS;gene=rsmG;go_component=cellular_component|0005575||IEA;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011276913.1;locus_tag=PYH62_11205;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WHI79278.1;transl_table=11 CP118825.1 Genbank gene 2224315 2226192 . - . ID=gene-PYH62_11210;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=PYH62_11210 CP118825.1 Protein Homology CDS 2224315 2226192 . - 0 ID=cds-WHI79279.1;Parent=gene-PYH62_11210;Dbxref=NCBI_GP:WHI79279.1;Name=WHI79279.1;Ontology_term=GO:0002098,GO:0008033,GO:0050660;gbkey=CDS;gene=mnmG;go_function=flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501497.2;locus_tag=PYH62_11210;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WHI79279.1;transl_table=11 CP118825.1 Genbank gene 2226263 2227642 . - . ID=gene-PYH62_11215;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=PYH62_11215 CP118825.1 Protein Homology CDS 2226263 2227642 . - 0 ID=cds-WHI79280.1;Parent=gene-PYH62_11215;Dbxref=NCBI_GP:WHI79280.1;Name=WHI79280.1;Ontology_term=GO:0006400,GO:0003924,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_501498.1;locus_tag=PYH62_11215;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WHI79280.1;transl_table=11 CP118825.1 Genbank gene 2227783 2228127 . - . ID=gene-PYH62_11220;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=PYH62_11220 CP118825.1 Protein Homology CDS 2227783 2228127 . - 0 ID=cds-WHI79281.1;Parent=gene-PYH62_11220;Dbxref=NCBI_GP:WHI79281.1;Name=WHI79281.1;Ontology_term=GO:0006396,GO:0004526;gbkey=CDS;gene=rnpA;go_function=ribonuclease P activity|0004526||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017636722.1;locus_tag=PYH62_11220;product=ribonuclease P protein component;protein_id=WHI79281.1;transl_table=11 CP118825.1 Genbank gene 2228226 2228363 . - . ID=gene-PYH62_11225;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=PYH62_11225 CP118825.1 Protein Homology CDS 2228226 2228363 . - 0 ID=cds-WHI79282.1;Parent=gene-PYH62_11225;Dbxref=NCBI_GP:WHI79282.1;Name=WHI79282.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000240855.1;locus_tag=PYH62_11225;product=50S ribosomal protein L34;protein_id=WHI79282.1;transl_table=11 ##sequence-region CP118826.1 1 13607 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1290 CP118826.1 Genbank region 1 13607 . + . ID=CP118826.1:1..13607;Dbxref=taxon:1290;Is_circular=true;Name=pML7056-1;collection-date=2022-06-06;country=Algeria: Ouargla;gbkey=Src;genome=plasmid;isolation-source=Nose;mol_type=genomic DNA;nat-host=Camelus dromedarius;plasmid-name=pML7056-1;strain=7056 CP118826.1 Genbank gene 1904 2512 . + . ID=gene-PYH62_11235;Name=PYH62_11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11235 CP118826.1 Protein Homology CDS 1904 2512 . + 0 ID=cds-WHI80291.1;Parent=gene-PYH62_11235;Dbxref=NCBI_GP:WHI80291.1;Name=WHI80291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002474535.1;locus_tag=PYH62_11235;product=recombinase family protein;protein_id=WHI80291.1;transl_table=11 CP118826.1 Genbank gene 2695 2922 . + . ID=gene-PYH62_11240;Name=PYH62_11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11240 CP118826.1 GeneMarkS-2+ CDS 2695 2922 . + 0 ID=cds-WHI80292.1;Parent=gene-PYH62_11240;Dbxref=NCBI_GP:WHI80292.1;Name=WHI80292.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_11240;product=hypothetical protein;protein_id=WHI80292.1;transl_table=11 CP118826.1 Genbank gene 3006 3569 . - . ID=gene-PYH62_11245;Name=PYH62_11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11245 CP118826.1 Protein Homology CDS 3006 3569 . - 0 ID=cds-WHI80293.1;Parent=gene-PYH62_11245;Dbxref=NCBI_GP:WHI80293.1;Name=WHI80293.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017437.2;locus_tag=PYH62_11245;product=Mu transposase C-terminal domain-containing protein;protein_id=WHI80293.1;transl_table=11 CP118826.1 Genbank gene 3581 4888 . - . ID=gene-PYH62_11250;Name=PYH62_11250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11250 CP118826.1 Protein Homology CDS 3581 4888 . - 0 ID=cds-WHI80294.1;Parent=gene-PYH62_11250;Dbxref=NCBI_GP:WHI80294.1;Name=WHI80294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008881866.1;locus_tag=PYH62_11250;product=translation elongation factor;protein_id=WHI80294.1;transl_table=11 CP118826.1 Genbank gene 5034 5870 . + . ID=gene-PYH62_11255;Name=PYH62_11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11255 CP118826.1 Protein Homology CDS 5034 5870 . + 0 ID=cds-WHI80295.1;Parent=gene-PYH62_11255;Dbxref=NCBI_GP:WHI80295.1;Name=WHI80295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008881867.1;locus_tag=PYH62_11255;product=DNA adenine methylase;protein_id=WHI80295.1;transl_table=11 CP118826.1 Genbank gene 5990 6751 . - . ID=gene-PYH62_11260;Name=PYH62_11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11260 CP118826.1 Protein Homology CDS 5990 6751 . - 0 ID=cds-WHI80296.1;Parent=gene-PYH62_11260;Dbxref=NCBI_GP:WHI80296.1;Name=WHI80296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489261.1;locus_tag=PYH62_11260;product=DUF536 domain-containing protein;protein_id=WHI80296.1;transl_table=11 CP118826.1 Genbank gene 7193 8128 . + . ID=gene-PYH62_11265;Name=PYH62_11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11265 CP118826.1 Protein Homology CDS 7193 8128 . + 0 ID=cds-WHI80283.1;Parent=gene-PYH62_11265;Dbxref=NCBI_GP:WHI80283.1;Name=WHI80283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001829877.1;locus_tag=PYH62_11265;product=replication initiator protein A;protein_id=WHI80283.1;transl_table=11 CP118826.1 Genbank gene 8354 8593 . - . ID=gene-PYH62_11270;Name=PYH62_11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11270 CP118826.1 Protein Homology CDS 8354 8593 . - 0 ID=cds-WHI80284.1;Parent=gene-PYH62_11270;Dbxref=NCBI_GP:WHI80284.1;Name=WHI80284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002505615.1;locus_tag=PYH62_11270;product=hypothetical protein;protein_id=WHI80284.1;transl_table=11 CP118826.1 Genbank gene 8598 8879 . - . ID=gene-PYH62_11275;Name=PYH62_11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11275 CP118826.1 Protein Homology CDS 8598 8879 . - 0 ID=cds-WHI80285.1;Parent=gene-PYH62_11275;Dbxref=NCBI_GP:WHI80285.1;Name=WHI80285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002489259.1;locus_tag=PYH62_11275;product=hypothetical protein;protein_id=WHI80285.1;transl_table=11 CP118826.1 Genbank gene 9083 11005 . + . ID=gene-PYH62_11280;Name=PYH62_11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11280 CP118826.1 Protein Homology CDS 9083 11005 . + 0 ID=cds-WHI80286.1;Parent=gene-PYH62_11280;Dbxref=NCBI_GP:WHI80286.1;Name=WHI80286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002387629.1;locus_tag=PYH62_11280;product=MobA/MobL family protein;protein_id=WHI80286.1;transl_table=11 CP118826.1 Genbank gene 11313 11771 . + . ID=gene-PYH62_11285;Name=PYH62_11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11285 CP118826.1 GeneMarkS-2+ CDS 11313 11771 . + 0 ID=cds-WHI80287.1;Parent=gene-PYH62_11285;Dbxref=NCBI_GP:WHI80287.1;Name=WHI80287.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_11285;product=hypothetical protein;protein_id=WHI80287.1;transl_table=11 CP118826.1 Genbank gene 11786 12400 . + . ID=gene-PYH62_11290;Name=PYH62_11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11290 CP118826.1 Protein Homology CDS 11786 12400 . + 0 ID=cds-WHI80288.1;Parent=gene-PYH62_11290;Dbxref=NCBI_GP:WHI80288.1;Name=WHI80288.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024986.2;locus_tag=PYH62_11290;product=pentapeptide repeat-containing protein;protein_id=WHI80288.1;transl_table=11 CP118826.1 Genbank gene 12747 13295 . - . ID=gene-PYH62_11295;Name=PYH62_11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11295 CP118826.1 Protein Homology CDS 12747 13295 . - 0 ID=cds-WHI80289.1;Parent=gene-PYH62_11295;Dbxref=NCBI_GP:WHI80289.1;Name=WHI80289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011117525.1;locus_tag=PYH62_11295;product=recombinase family protein;protein_id=WHI80289.1;transl_table=11 CP118826.1 Genbank gene 13587 15332 . + . ID=gene-PYH62_11230;Name=PYH62_11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11230 CP118826.1 GeneMarkS-2+ CDS 13587 15332 . + 0 ID=cds-WHI80290.1;Parent=gene-PYH62_11230;Dbxref=NCBI_GP:WHI80290.1;Name=WHI80290.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=PYH62_11230;product=AIPR family protein;protein_id=WHI80290.1;transl_table=11 ##sequence-region CP118827.1 1 4439 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1290 CP118827.1 Genbank region 1 4439 . + . ID=CP118827.1:1..4439;Dbxref=taxon:1290;Name=pML7056-2;collection-date=2022-06-06;country=Algeria: Ouargla;gbkey=Src;genome=plasmid;isolation-source=Nose;mol_type=genomic DNA;nat-host=Camelus dromedarius;plasmid-name=pML7056-2;strain=7056 CP118827.1 Genbank gene 1 1380 . + . ID=gene-PYH62_11300;Name=tet(K);gbkey=Gene;gene=tet(K);gene_biotype=protein_coding;locus_tag=PYH62_11300;partial=true;start_range=.,1 CP118827.1 Protein Homology CDS 1 1380 . + 0 ID=cds-WHI80297.1;Parent=gene-PYH62_11300;Dbxref=NCBI_GP:WHI80297.1;Name=WHI80297.1;gbkey=CDS;gene=tet(K);inference=COORDINATES: similar to AA sequence:RefSeq:WP_000492283.1;locus_tag=PYH62_11300;partial=true;product=tetracycline efflux MFS transporter Tet(K);protein_id=WHI80297.1;start_range=.,1;transl_table=11 CP118827.1 Genbank gene 1566 2807 . + . ID=gene-PYH62_11305;Name=mobV;gbkey=Gene;gene=mobV;gene_biotype=protein_coding;locus_tag=PYH62_11305 CP118827.1 Protein Homology CDS 1566 2807 . + 0 ID=cds-WHI80298.1;Parent=gene-PYH62_11305;Dbxref=NCBI_GP:WHI80298.1;Name=WHI80298.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;gene=mobV;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010889940.1;locus_tag=PYH62_11305;product=MobV family relaxase;protein_id=WHI80298.1;transl_table=11 CP118827.1 Genbank gene 3334 4278 . + . ID=gene-PYH62_11310;Name=PYH62_11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11310 CP118827.1 Protein Homology CDS 3334 4278 . + 0 ID=cds-WHI80299.1;Parent=gene-PYH62_11310;Dbxref=NCBI_GP:WHI80299.1;Name=WHI80299.1;Ontology_term=GO:0006270,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000277654.1;locus_tag=PYH62_11310;product=replication initiation factor domain-containing protein;protein_id=WHI80299.1;transl_table=11 ##sequence-region CP118828.1 1 4706 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1290 CP118828.1 Genbank region 1 4706 . + . ID=CP118828.1:1..4706;Dbxref=taxon:1290;Name=pML7056-3;collection-date=2022-06-06;country=Algeria: Ouargla;gbkey=Src;genome=plasmid;isolation-source=Nose;mol_type=genomic DNA;nat-host=Camelus dromedarius;plasmid-name=pML7056-3;strain=7056 CP118828.1 Genbank gene 1 936 . + . ID=gene-PYH62_11315;Name=PYH62_11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11315;partial=true;start_range=.,1 CP118828.1 Protein Homology CDS 1 936 . + 0 ID=cds-WHI80300.1;Parent=gene-PYH62_11315;Dbxref=NCBI_GP:WHI80300.1;Name=WHI80300.1;Ontology_term=GO:0006270,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440612.1;locus_tag=PYH62_11315;partial=true;product=replication initiation factor domain-containing protein;protein_id=WHI80300.1;start_range=.,1;transl_table=11 CP118828.1 Genbank gene 2353 3288 . + . ID=gene-PYH62_11320;Name=PYH62_11320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=PYH62_11320 CP118828.1 Protein Homology CDS 2353 3288 . + 0 ID=cds-WHI80301.1;Parent=gene-PYH62_11320;Dbxref=NCBI_GP:WHI80301.1;Name=WHI80301.1;Ontology_term=GO:0006270,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002440612.1;locus_tag=PYH62_11320;product=replication initiation factor domain-containing protein;protein_id=WHI80301.1;transl_table=11 ###