##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM91449271v1 #!genome-build-accession NCBI_Assembly:GCF_914492715.1 #!annotation-date 08/30/2025 10:52:18 #!annotation-source NCBI RefSeq GCF_914492715.1-RS_2025_08_30 ##sequence-region NZ_CAJZAV010000001.1 1 27370 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000001.1 RefSeq region 1 27370 . + . ID=NZ_CAJZAV010000001.1:1..27370;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_1 NZ_CAJZAV010000001.1 RefSeq gene 1 1129 . + . ID=gene-LDO49_RS00005;Name=LDO49_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00005;old_locus_tag=BCEP4_10001;partial=true;start_range=.,1 NZ_CAJZAV010000001.1 Protein Homology CDS 1 1129 . + 1 ID=cds-WP_224051280.1;Parent=gene-LDO49_RS00005;Dbxref=GenBank:WP_224051280.1;Name=WP_224051280.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329424.1;locus_tag=LDO49_RS00005;partial=true;product=sensor histidine kinase;protein_id=WP_224051280.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 1143 1685 . + . ID=gene-LDO49_RS00010;Name=LDO49_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00010;old_locus_tag=BCEP4_10002 NZ_CAJZAV010000001.1 Protein Homology CDS 1143 1685 . + 0 ID=cds-WP_021156278.1;Parent=gene-LDO49_RS00010;Dbxref=GenBank:WP_021156278.1;Name=WP_021156278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334600.1;locus_tag=LDO49_RS00010;product=response regulator transcription factor;protein_id=WP_021156278.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 1708 2037 . - . ID=gene-LDO49_RS00015;Name=LDO49_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00015;old_locus_tag=BCEP4_10003 NZ_CAJZAV010000001.1 Protein Homology CDS 1708 2037 . - 0 ID=cds-WP_224051286.1;Parent=gene-LDO49_RS00015;Dbxref=GenBank:WP_224051286.1;Name=WP_224051286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895728.1;locus_tag=LDO49_RS00015;product=hypothetical protein;protein_id=WP_224051286.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 2250 3593 . - . ID=gene-LDO49_RS00020;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=LDO49_RS00020;old_locus_tag=BCEP4_10004 NZ_CAJZAV010000001.1 Protein Homology CDS 2250 3593 . - 0 ID=cds-WP_042972634.1;Parent=gene-LDO49_RS00020;Dbxref=GenBank:WP_042972634.1;Name=WP_042972634.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895729.1;locus_tag=LDO49_RS00020;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_042972634.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 3604 4140 . - . ID=gene-LDO49_RS00025;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=LDO49_RS00025;old_locus_tag=BCEP4_10005 NZ_CAJZAV010000001.1 Protein Homology CDS 3604 4140 . - 0 ID=cds-WP_021156275.1;Parent=gene-LDO49_RS00025;Dbxref=GenBank:WP_021156275.1;Name=WP_021156275.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760749.1;locus_tag=LDO49_RS00025;product=ATP-dependent protease subunit HslV;protein_id=WP_021156275.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 4383 4799 . - . ID=gene-LDO49_RS00030;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=LDO49_RS00030;old_locus_tag=BCEP4_10006 NZ_CAJZAV010000001.1 Protein Homology CDS 4383 4799 . - 0 ID=cds-WP_006477498.1;Parent=gene-LDO49_RS00030;Dbxref=GenBank:WP_006477498.1;Name=WP_006477498.1;Ontology_term=GO:0006355,GO:0008270,GO:0019899;gbkey=CDS;gene=dksA;go_function=zinc ion binding|0008270||IEA,enzyme binding|0019899||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100883.1;locus_tag=LDO49_RS00030;product=RNA polymerase-binding protein DksA;protein_id=WP_006477498.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 5296 6375 . - . ID=gene-LDO49_RS00035;Name=LDO49_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00035;old_locus_tag=BCEP4_10007 NZ_CAJZAV010000001.1 Protein Homology CDS 5296 6375 . - 0 ID=cds-WP_021156274.1;Parent=gene-LDO49_RS00035;Dbxref=GenBank:WP_021156274.1;Name=WP_021156274.1;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409693.1;locus_tag=LDO49_RS00035;product=CobW family GTP-binding protein;protein_id=WP_021156274.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 6577 7791 . - . ID=gene-LDO49_RS00040;Name=LDO49_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00040;old_locus_tag=BCEP4_10008 NZ_CAJZAV010000001.1 Protein Homology CDS 6577 7791 . - 0 ID=cds-WP_042972632.1;Parent=gene-LDO49_RS00040;Dbxref=GenBank:WP_042972632.1;Name=WP_042972632.1;Ontology_term=GO:0006364,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011204773.1;locus_tag=LDO49_RS00040;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_042972632.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 7868 8788 . - . ID=gene-LDO49_RS00045;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=LDO49_RS00045;old_locus_tag=BCEP4_10009 NZ_CAJZAV010000001.1 Protein Homology CDS 7868 8788 . - 0 ID=cds-WP_042972630.1;Parent=gene-LDO49_RS00045;Dbxref=GenBank:WP_042972630.1;Name=WP_042972630.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895732.1;locus_tag=LDO49_RS00045;product=tyrosine recombinase XerC;protein_id=WP_042972630.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 8803 9531 . - . ID=gene-LDO49_RS00050;Name=LDO49_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00050;old_locus_tag=BCEP4_10010 NZ_CAJZAV010000001.1 Protein Homology CDS 8803 9531 . - 0 ID=cds-WP_059554751.1;Parent=gene-LDO49_RS00050;Dbxref=GenBank:WP_059554751.1;Name=WP_059554751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895733.1;locus_tag=LDO49_RS00050;product=DUF484 family protein;protein_id=WP_059554751.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 9569 10438 . - . ID=gene-LDO49_RS00055;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=LDO49_RS00055;old_locus_tag=BCEP4_10011 NZ_CAJZAV010000001.1 Protein Homology CDS 9569 10438 . - 0 ID=cds-WP_027788876.1;Parent=gene-LDO49_RS00055;Dbxref=GenBank:WP_027788876.1;Name=WP_027788876.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353535.1;locus_tag=LDO49_RS00055;product=diaminopimelate epimerase;protein_id=WP_027788876.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 10687 10995 . + . ID=gene-LDO49_RS00060;Name=LDO49_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00060;old_locus_tag=BCEP4_10012 NZ_CAJZAV010000001.1 Protein Homology CDS 10687 10995 . + 0 ID=cds-WP_224051281.1;Parent=gene-LDO49_RS00060;Dbxref=GenBank:WP_224051281.1;Name=WP_224051281.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018439401.1;locus_tag=LDO49_RS00060;product=HigA family addiction module antitoxin;protein_id=WP_224051281.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 11026 11910 . - . ID=gene-LDO49_RS00065;Name=lpxL;gbkey=Gene;gene=lpxL;gene_biotype=protein_coding;locus_tag=LDO49_RS00065;old_locus_tag=BCEP4_10013 NZ_CAJZAV010000001.1 Protein Homology CDS 11026 11910 . - 0 ID=cds-WP_021163506.1;Parent=gene-LDO49_RS00065;Dbxref=GenBank:WP_021163506.1;Name=WP_021163506.1;gbkey=CDS;gene=lpxL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482982.1;locus_tag=LDO49_RS00065;product=lauroyl acyltransferase LpxL;protein_id=WP_021163506.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 12176 13363 . + . ID=gene-LDO49_RS00070;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=LDO49_RS00070;old_locus_tag=BCEP4_10014 NZ_CAJZAV010000001.1 Protein Homology CDS 12176 13363 . + 0 ID=cds-WP_011353531.1;Parent=gene-LDO49_RS00070;Dbxref=GenBank:WP_011353531.1;Name=WP_011353531.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024140.1;locus_tag=LDO49_RS00070;product=methionine adenosyltransferase;protein_id=WP_011353531.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 13502 13843 . - . ID=gene-LDO49_RS00075;Name=LDO49_RS00075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00075;old_locus_tag=BCEP4_10015 NZ_CAJZAV010000001.1 Protein Homology CDS 13502 13843 . - 0 ID=cds-WP_021163507.1;Parent=gene-LDO49_RS00075;Dbxref=GenBank:WP_021163507.1;Name=WP_021163507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886318.1;locus_tag=LDO49_RS00075;product=hypothetical protein;protein_id=WP_021163507.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 14196 14969 . + . ID=gene-LDO49_RS00080;Name=LDO49_RS00080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00080;old_locus_tag=BCEP4_10016 NZ_CAJZAV010000001.1 Protein Homology CDS 14196 14969 . + 0 ID=cds-WP_224051282.1;Parent=gene-LDO49_RS00080;Dbxref=GenBank:WP_224051282.1;Name=WP_224051282.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364943.1;locus_tag=LDO49_RS00080;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_224051282.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 15119 15325 . - . ID=gene-LDO49_RS00085;Name=LDO49_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00085;old_locus_tag=BCEP4_10017 NZ_CAJZAV010000001.1 Protein Homology CDS 15119 15325 . - 0 ID=cds-WP_021163509.1;Parent=gene-LDO49_RS00085;Dbxref=GenBank:WP_021163509.1;Name=WP_021163509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024143.1;locus_tag=LDO49_RS00085;product=DUF3185 family protein;protein_id=WP_021163509.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 15517 16560 . + . ID=gene-LDO49_RS00090;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=LDO49_RS00090;old_locus_tag=BCEP4_10018 NZ_CAJZAV010000001.1 Protein Homology CDS 15517 16560 . + 0 ID=cds-WP_021163510.1;Parent=gene-LDO49_RS00090;Dbxref=GenBank:WP_021163510.1;Name=WP_021163510.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008923385.1;locus_tag=LDO49_RS00090;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_021163510.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 16670 16855 . - . ID=gene-LDO49_RS00095;Name=LDO49_RS00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00095;old_locus_tag=BCEP4_10019 NZ_CAJZAV010000001.1 Protein Homology CDS 16670 16855 . - 0 ID=cds-WP_011353526.1;Parent=gene-LDO49_RS00095;Dbxref=GenBank:WP_011353526.1;Name=WP_011353526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100910.1;locus_tag=LDO49_RS00095;product=hypothetical protein;protein_id=WP_011353526.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 17159 18040 . - . ID=gene-LDO49_RS00100;Name=LDO49_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00100;old_locus_tag=BCEP4_10020 NZ_CAJZAV010000001.1 Protein Homology CDS 17159 18040 . - 0 ID=cds-WP_224051283.1;Parent=gene-LDO49_RS00100;Dbxref=GenBank:WP_224051283.1;Name=WP_224051283.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214341.1;locus_tag=LDO49_RS00100;product=DMT family transporter;protein_id=WP_224051283.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 18855 19067 . + . ID=gene-LDO49_RS00105;Name=LDO49_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00105;old_locus_tag=BCEP4_10021 NZ_CAJZAV010000001.1 Protein Homology CDS 18855 19067 . + 0 ID=cds-WP_004198969.1;Parent=gene-LDO49_RS00105;Dbxref=GenBank:WP_004198969.1;Name=WP_004198969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198969.1;locus_tag=LDO49_RS00105;product=hypothetical protein;protein_id=WP_004198969.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 19126 20148 . + . ID=gene-LDO49_RS00110;Name=LDO49_RS00110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00110;old_locus_tag=BCEP4_10022 NZ_CAJZAV010000001.1 Protein Homology CDS 19126 20148 . + 0 ID=cds-WP_371748560.1;Parent=gene-LDO49_RS00110;Dbxref=GenBank:WP_371748560.1;Name=WP_371748560.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255177.1;locus_tag=LDO49_RS00110;product=serine/threonine protein kinase;protein_id=WP_371748560.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 20230 21672 . - . ID=gene-LDO49_RS00115;Name=LDO49_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00115;old_locus_tag=BCEP4_10023 NZ_CAJZAV010000001.1 Protein Homology CDS 20230 21672 . - 0 ID=cds-WP_059812420.1;Parent=gene-LDO49_RS00115;Dbxref=GenBank:WP_059812420.1;Name=WP_059812420.1;Ontology_term=GO:0006081,GO:0050269;gbkey=CDS;go_function=coniferyl-aldehyde dehydrogenase [NAD(P)+] activity|0050269||IEA;go_process=aldehyde metabolic process|0006081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100937.1;locus_tag=LDO49_RS00115;product=coniferyl aldehyde dehydrogenase;protein_id=WP_059812420.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 22398 24038 . + . ID=gene-LDO49_RS00120;Name=LDO49_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00120;old_locus_tag=BCEP4_10024 NZ_CAJZAV010000001.1 Protein Homology CDS 22398 24038 . + 0 ID=cds-WP_060073958.1;Parent=gene-LDO49_RS00120;Dbxref=GenBank:WP_060073958.1;Name=WP_060073958.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329413.1;locus_tag=LDO49_RS00120;product=GMC family oxidoreductase;protein_id=WP_060073958.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 24066 25352 . - . ID=gene-LDO49_RS00125;Name=LDO49_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00125;old_locus_tag=BCEP4_10025 NZ_CAJZAV010000001.1 Protein Homology CDS 24066 25352 . - 0 ID=cds-WP_224051284.1;Parent=gene-LDO49_RS00125;Dbxref=GenBank:WP_224051284.1;Name=WP_224051284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658180.1;locus_tag=LDO49_RS00125;product=flagellar hook-length control protein FliK;protein_id=WP_224051284.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 25383 25841 . - . ID=gene-LDO49_RS00130;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=LDO49_RS00130;old_locus_tag=BCEP4_10027 NZ_CAJZAV010000001.1 Protein Homology CDS 25383 25841 . - 0 ID=cds-WP_021163734.1;Parent=gene-LDO49_RS00130;Dbxref=GenBank:WP_021163734.1;Name=WP_021163734.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546447.1;locus_tag=LDO49_RS00130;product=flagellar export protein FliJ;protein_id=WP_021163734.1;transl_table=11 NZ_CAJZAV010000001.1 RefSeq gene 25847 27370 . - . ID=gene-LDO49_RS00135;Name=fliI;end_range=27370,.;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=LDO49_RS00135;old_locus_tag=BCEP4_10028;partial=true NZ_CAJZAV010000001.1 Protein Homology CDS 25847 27370 . - 0 ID=cds-WP_224051285.1;Parent=gene-LDO49_RS00135;Dbxref=GenBank:WP_224051285.1;Name=WP_224051285.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;end_range=27370,.;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658178.1;locus_tag=LDO49_RS00135;partial=true;product=flagellar protein export ATPase FliI;protein_id=WP_224051285.1;transl_table=11 ##sequence-region NZ_CAJZAV010000002.1 1 195795 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000002.1 RefSeq region 1 195795 . + . ID=NZ_CAJZAV010000002.1:1..195795;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_10 NZ_CAJZAV010000002.1 RefSeq gene 1 915 . - . ID=gene-LDO49_RS00140;Name=LDO49_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00140;partial=true;start_range=.,1 NZ_CAJZAV010000002.1 Protein Homology CDS 1 915 . - 0 ID=cds-WP_224051288.1;Parent=gene-LDO49_RS00140;Dbxref=GenBank:WP_224051288.1;Name=WP_224051288.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491243.1;locus_tag=LDO49_RS00140;partial=true;product=NYN domain-containing protein;protein_id=WP_224051288.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 1155 1784 . + . ID=gene-LDO49_RS00145;Name=LDO49_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00145;old_locus_tag=BCEP4_100002 NZ_CAJZAV010000002.1 Protein Homology CDS 1155 1784 . + 0 ID=cds-WP_027787962.1;Parent=gene-LDO49_RS00145;Dbxref=GenBank:WP_027787962.1;Name=WP_027787962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476432.1;locus_tag=LDO49_RS00145;product=NAD(P)H-binding protein;protein_id=WP_027787962.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 1903 2454 . - . ID=gene-LDO49_RS00150;Name=LDO49_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00150;old_locus_tag=BCEP4_100003 NZ_CAJZAV010000002.1 Protein Homology CDS 1903 2454 . - 0 ID=cds-WP_224051289.1;Parent=gene-LDO49_RS00150;Dbxref=GenBank:WP_224051289.1;Name=WP_224051289.1;Ontology_term=GO:0008379,GO:0051920;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA,peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897592.1;locus_tag=LDO49_RS00150;product=peroxiredoxin;protein_id=WP_224051289.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 2734 4476 . + . ID=gene-LDO49_RS00155;Name=cdpA;gbkey=Gene;gene=cdpA;gene_biotype=protein_coding;locus_tag=LDO49_RS00155;old_locus_tag=BCEP4_100004 NZ_CAJZAV010000002.1 Protein Homology CDS 2734 4476 . + 0 ID=cds-WP_194290282.1;Parent=gene-LDO49_RS00155;Dbxref=GenBank:WP_194290282.1;Name=WP_194290282.1;gbkey=CDS;gene=cdpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011204972.1;locus_tag=LDO49_RS00155;product=cyclic di-GMP phosphodiesterase CdpA;protein_id=WP_194290282.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 4502 6001 . + . ID=gene-LDO49_RS00160;Name=LDO49_RS00160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00160;old_locus_tag=BCEP4_100005 NZ_CAJZAV010000002.1 Protein Homology CDS 4502 6001 . + 0 ID=cds-WP_021161766.1;Parent=gene-LDO49_RS00160;Dbxref=GenBank:WP_021161766.1;Name=WP_021161766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351466.1;locus_tag=LDO49_RS00160;product=HDOD domain-containing protein;protein_id=WP_021161766.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 6102 6896 . - . ID=gene-LDO49_RS00165;Name=LDO49_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00165;old_locus_tag=BCEP4_100006 NZ_CAJZAV010000002.1 Protein Homology CDS 6102 6896 . - 0 ID=cds-WP_048024404.1;Parent=gene-LDO49_RS00165;Dbxref=GenBank:WP_048024404.1;Name=WP_048024404.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025859.1;locus_tag=LDO49_RS00165;product=ABC transporter substrate-binding protein;protein_id=WP_048024404.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 7261 8304 . - . ID=gene-LDO49_RS00170;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=LDO49_RS00170;old_locus_tag=BCEP4_100007 NZ_CAJZAV010000002.1 Protein Homology CDS 7261 8304 . - 0 ID=cds-WP_060072851.1;Parent=gene-LDO49_RS00170;Dbxref=GenBank:WP_060072851.1;Name=WP_060072851.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328183.1;locus_tag=LDO49_RS00170;product=succinylglutamate desuccinylase;protein_id=WP_060072851.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 8312 9652 . - . ID=gene-LDO49_RS00175;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=LDO49_RS00175;old_locus_tag=BCEP4_100008 NZ_CAJZAV010000002.1 Protein Homology CDS 8312 9652 . - 0 ID=cds-WP_021163198.1;Parent=gene-LDO49_RS00175;Dbxref=GenBank:WP_021163198.1;Name=WP_021163198.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025855.1;locus_tag=LDO49_RS00175;product=N-succinylarginine dihydrolase;protein_id=WP_021163198.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 9667 11130 . - . ID=gene-LDO49_RS00180;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=LDO49_RS00180;old_locus_tag=BCEP4_100009 NZ_CAJZAV010000002.1 Protein Homology CDS 9667 11130 . - 0 ID=cds-WP_060072849.1;Parent=gene-LDO49_RS00180;Dbxref=GenBank:WP_060072849.1;Name=WP_060072849.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656401.1;locus_tag=LDO49_RS00180;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_060072849.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 11138 12172 . - . ID=gene-LDO49_RS00185;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=LDO49_RS00185;old_locus_tag=BCEP4_100010 NZ_CAJZAV010000002.1 Protein Homology CDS 11138 12172 . - 0 ID=cds-WP_021163196.1;Parent=gene-LDO49_RS00185;Dbxref=GenBank:WP_021163196.1;Name=WP_021163196.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009931289.1;locus_tag=LDO49_RS00185;product=arginine N-succinyltransferase;protein_id=WP_021163196.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 12169 13221 . - . ID=gene-LDO49_RS00190;Name=aruF;gbkey=Gene;gene=aruF;gene_biotype=protein_coding;locus_tag=LDO49_RS00190;old_locus_tag=BCEP4_100011 NZ_CAJZAV010000002.1 Protein Homology CDS 12169 13221 . - 0 ID=cds-WP_021163195.1;Parent=gene-LDO49_RS00190;Dbxref=GenBank:WP_021163195.1;Name=WP_021163195.1;gbkey=CDS;gene=aruF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524646.1;locus_tag=LDO49_RS00190;product=arginine/ornithine succinyltransferase subunit alpha;protein_id=WP_021163195.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 13252 14484 . - . ID=gene-LDO49_RS00195;Name=LDO49_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00195;old_locus_tag=BCEP4_100012 NZ_CAJZAV010000002.1 Protein Homology CDS 13252 14484 . - 0 ID=cds-WP_021163194.1;Parent=gene-LDO49_RS00195;Dbxref=GenBank:WP_021163194.1;Name=WP_021163194.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755011.1;locus_tag=LDO49_RS00195;product=aspartate aminotransferase family protein;protein_id=WP_021163194.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 15561 16601 . - . ID=gene-LDO49_RS00200;Name=LDO49_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00200;old_locus_tag=BCEP4_100015 NZ_CAJZAV010000002.1 Protein Homology CDS 15561 16601 . - 0 ID=cds-WP_027787973.1;Parent=gene-LDO49_RS00200;Dbxref=GenBank:WP_027787973.1;Name=WP_027787973.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408165.1;locus_tag=LDO49_RS00200;product=GlxA family transcriptional regulator;protein_id=WP_027787973.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 16624 17424 . - . ID=gene-LDO49_RS00205;Name=LDO49_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00205;old_locus_tag=BCEP4_100016 NZ_CAJZAV010000002.1 Protein Homology CDS 16624 17424 . - 0 ID=cds-WP_021163192.1;Parent=gene-LDO49_RS00205;Dbxref=GenBank:WP_021163192.1;Name=WP_021163192.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254933.1;locus_tag=LDO49_RS00205;product=ABC transporter ATP-binding protein;protein_id=WP_021163192.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 17445 18158 . - . ID=gene-LDO49_RS00210;Name=LDO49_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00210;old_locus_tag=BCEP4_100017 NZ_CAJZAV010000002.1 Protein Homology CDS 17445 18158 . - 0 ID=cds-WP_048024394.1;Parent=gene-LDO49_RS00210;Dbxref=GenBank:WP_048024394.1;Name=WP_048024394.1;Ontology_term=GO:0022857,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424506.1;locus_tag=LDO49_RS00210;product=ABC transporter permease;protein_id=WP_048024394.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 18155 18844 . - . ID=gene-LDO49_RS00215;Name=LDO49_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00215;old_locus_tag=BCEP4_100018 NZ_CAJZAV010000002.1 Protein Homology CDS 18155 18844 . - 0 ID=cds-WP_021163190.1;Parent=gene-LDO49_RS00215;Dbxref=GenBank:WP_021163190.1;Name=WP_021163190.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527442.1;locus_tag=LDO49_RS00215;product=ABC transporter permease;protein_id=WP_021163190.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 19115 19672 . - . ID=gene-LDO49_RS00220;Name=LDO49_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00220;old_locus_tag=BCEP4_100019 NZ_CAJZAV010000002.1 Protein Homology CDS 19115 19672 . - 0 ID=cds-WP_060072847.1;Parent=gene-LDO49_RS00220;Dbxref=GenBank:WP_060072847.1;Name=WP_060072847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333215.1;locus_tag=LDO49_RS00220;product=hypothetical protein;protein_id=WP_060072847.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 19760 20809 . - . ID=gene-LDO49_RS00225;Name=LDO49_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00225;old_locus_tag=BCEP4_100020 NZ_CAJZAV010000002.1 Protein Homology CDS 19760 20809 . - 0 ID=cds-WP_060072846.1;Parent=gene-LDO49_RS00225;Dbxref=GenBank:WP_060072846.1;Name=WP_060072846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213764.1;locus_tag=LDO49_RS00225;product=lysylphosphatidylglycerol synthase domain-containing protein;protein_id=WP_060072846.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 20806 21690 . - . ID=gene-LDO49_RS00230;Name=hpnK;gbkey=Gene;gene=hpnK;gene_biotype=protein_coding;locus_tag=LDO49_RS00230;old_locus_tag=BCEP4_100021 NZ_CAJZAV010000002.1 Protein Homology CDS 20806 21690 . - 0 ID=cds-WP_060072844.1;Parent=gene-LDO49_RS00230;Dbxref=GenBank:WP_060072844.1;Name=WP_060072844.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=hpnK;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401218.1;locus_tag=LDO49_RS00230;product=hopanoid biosynthesis-associated protein HpnK;protein_id=WP_060072844.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 21694 23136 . - . ID=gene-LDO49_RS00235;Name=hpnJ;gbkey=Gene;gene=hpnJ;gene_biotype=protein_coding;locus_tag=LDO49_RS00235;old_locus_tag=BCEP4_100022 NZ_CAJZAV010000002.1 Protein Homology CDS 21694 23136 . - 0 ID=cds-WP_309301883.1;Parent=gene-LDO49_RS00235;Dbxref=GenBank:WP_309301883.1;Name=WP_309301883.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;gene=hpnJ;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722751.1;locus_tag=LDO49_RS00235;product=hopanoid biosynthesis associated radical SAM protein HpnJ;protein_id=WP_309301883.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 23273 24448 . - . ID=gene-LDO49_RS00240;Name=hpnI;gbkey=Gene;gene=hpnI;gene_biotype=protein_coding;locus_tag=LDO49_RS00240;old_locus_tag=BCEP4_100023 NZ_CAJZAV010000002.1 Protein Homology CDS 23273 24448 . - 0 ID=cds-WP_060072843.1;Parent=gene-LDO49_RS00240;Dbxref=GenBank:WP_060072843.1;Name=WP_060072843.1;Ontology_term=GO:0016757;gbkey=CDS;gene=hpnI;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897610.1;locus_tag=LDO49_RS00240;product=bacteriohopanetetrol glucosamine biosynthesis glycosyltransferase HpnI;protein_id=WP_060072843.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 25088 26086 . + . ID=gene-LDO49_RS00245;Name=LDO49_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00245;old_locus_tag=BCEP4_100025 NZ_CAJZAV010000002.1 Protein Homology CDS 25088 26086 . + 0 ID=cds-WP_048024384.1;Parent=gene-LDO49_RS00245;Dbxref=GenBank:WP_048024384.1;Name=WP_048024384.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401221.1;locus_tag=LDO49_RS00245;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_048024384.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 26123 27184 . - . ID=gene-LDO49_RS00250;Name=LDO49_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00250;old_locus_tag=BCEP4_100026 NZ_CAJZAV010000002.1 Protein Homology CDS 26123 27184 . - 0 ID=cds-WP_042977701.1;Parent=gene-LDO49_RS00250;Dbxref=GenBank:WP_042977701.1;Name=WP_042977701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351448.1;locus_tag=LDO49_RS00250;product=alpha/beta fold hydrolase;protein_id=WP_042977701.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 27358 28218 . + . ID=gene-LDO49_RS00255;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=LDO49_RS00255;old_locus_tag=BCEP4_100027 NZ_CAJZAV010000002.1 Protein Homology CDS 27358 28218 . + 0 ID=cds-WP_042977705.1;Parent=gene-LDO49_RS00255;Dbxref=GenBank:WP_042977705.1;Name=WP_042977705.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884000.1;locus_tag=LDO49_RS00255;product=pyridoxal kinase PdxY;protein_id=WP_042977705.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 28577 30721 . + . ID=gene-LDO49_RS00260;Name=LDO49_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00260;old_locus_tag=BCEP4_100028 NZ_CAJZAV010000002.1 Protein Homology CDS 28577 30721 . + 0 ID=cds-WP_059551916.1;Parent=gene-LDO49_RS00260;Dbxref=GenBank:WP_059551916.1;Name=WP_059551916.1;Ontology_term=GO:0034480;gbkey=CDS;go_function=phosphatidylcholine phospholipase C activity|0034480||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484309.1;locus_tag=LDO49_RS00260;product=phosphocholine-specific phospholipase C;protein_id=WP_059551916.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 31090 32238 . + . ID=gene-LDO49_RS00265;Name=LDO49_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00265;old_locus_tag=BCEP4_100029 NZ_CAJZAV010000002.1 Protein Homology CDS 31090 32238 . + 0 ID=cds-WP_060072840.1;Parent=gene-LDO49_RS00265;Dbxref=GenBank:WP_060072840.1;Name=WP_060072840.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497706.1;locus_tag=LDO49_RS00265;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_060072840.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 32363 33124 . - . ID=gene-LDO49_RS00270;Name=LDO49_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00270;old_locus_tag=BCEP4_100030 NZ_CAJZAV010000002.1 Protein Homology CDS 32363 33124 . - 0 ID=cds-WP_021163105.1;Parent=gene-LDO49_RS00270;Dbxref=GenBank:WP_021163105.1;Name=WP_021163105.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883997.1;locus_tag=LDO49_RS00270;product=FadR/GntR family transcriptional regulator;protein_id=WP_021163105.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 33485 34837 . + . ID=gene-LDO49_RS00275;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=LDO49_RS00275;old_locus_tag=BCEP4_100031 NZ_CAJZAV010000002.1 Protein Homology CDS 33485 34837 . + 0 ID=cds-WP_048022991.1;Parent=gene-LDO49_RS00275;Dbxref=GenBank:WP_048022991.1;Name=WP_048022991.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764752.1;locus_tag=LDO49_RS00275;product=glucarate dehydratase;protein_id=WP_048022991.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 35081 35887 . - . ID=gene-LDO49_RS00280;Name=LDO49_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00280;old_locus_tag=BCEP4_100032 NZ_CAJZAV010000002.1 Protein Homology CDS 35081 35887 . - 0 ID=cds-WP_021163102.1;Parent=gene-LDO49_RS00280;Dbxref=GenBank:WP_021163102.1;Name=WP_021163102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751848.1;locus_tag=LDO49_RS00280;product=hypothetical protein;protein_id=WP_021163102.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 36122 37186 . - . ID=gene-LDO49_RS00285;Name=LDO49_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00285;old_locus_tag=BCEP4_100033 NZ_CAJZAV010000002.1 Protein Homology CDS 36122 37186 . - 0 ID=cds-WP_060072838.1;Parent=gene-LDO49_RS00285;Dbxref=GenBank:WP_060072838.1;Name=WP_060072838.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527452.1;locus_tag=LDO49_RS00285;product=glycosyltransferase family 4 protein;protein_id=WP_060072838.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 37751 39583 . + . ID=gene-LDO49_RS00290;Name=LDO49_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00290;old_locus_tag=BCEP4_100034 NZ_CAJZAV010000002.1 Protein Homology CDS 37751 39583 . + 0 ID=cds-WP_042977612.1;Parent=gene-LDO49_RS00290;Dbxref=GenBank:WP_042977612.1;Name=WP_042977612.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602293.1;locus_tag=LDO49_RS00290;product=ABC transporter ATP-binding protein;protein_id=WP_042977612.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 39662 41041 . - . ID=gene-LDO49_RS00295;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=LDO49_RS00295;old_locus_tag=BCEP4_100035 NZ_CAJZAV010000002.1 Protein Homology CDS 39662 41041 . - 0 ID=cds-WP_060072836.1;Parent=gene-LDO49_RS00295;Dbxref=GenBank:WP_060072836.1;Name=WP_060072836.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476461.1;locus_tag=LDO49_RS00295;product=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming);protein_id=WP_060072836.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 41038 41790 . - . ID=gene-LDO49_RS00300;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=LDO49_RS00300;old_locus_tag=BCEP4_100036 NZ_CAJZAV010000002.1 Protein Homology CDS 41038 41790 . - 0 ID=cds-WP_059498089.1;Parent=gene-LDO49_RS00300;Dbxref=GenBank:WP_059498089.1;Name=WP_059498089.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213775.1;locus_tag=LDO49_RS00300;product=trehalose-phosphatase;protein_id=WP_059498089.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 42073 42708 . + . ID=gene-LDO49_RS00305;Name=LDO49_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00305;old_locus_tag=BCEP4_100037 NZ_CAJZAV010000002.1 Protein Homology CDS 42073 42708 . + 0 ID=cds-WP_021163097.1;Parent=gene-LDO49_RS00305;Dbxref=GenBank:WP_021163097.1;Name=WP_021163097.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544964.1;locus_tag=LDO49_RS00305;product=SCO family protein;protein_id=WP_021163097.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 42723 43169 . + . ID=gene-LDO49_RS00310;Name=LDO49_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00310;old_locus_tag=BCEP4_100038 NZ_CAJZAV010000002.1 Protein Homology CDS 42723 43169 . + 0 ID=cds-WP_060072834.1;Parent=gene-LDO49_RS00310;Dbxref=GenBank:WP_060072834.1;Name=WP_060072834.1;Ontology_term=GO:0016531;gbkey=CDS;go_function=copper chaperone activity|0016531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476464.1;locus_tag=LDO49_RS00310;product=copper chaperone PCu(A)C;protein_id=WP_060072834.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 43180 44049 . + . ID=gene-LDO49_RS00315;Name=LDO49_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00315;old_locus_tag=BCEP4_100039 NZ_CAJZAV010000002.1 Protein Homology CDS 43180 44049 . + 0 ID=cds-WP_059854998.1;Parent=gene-LDO49_RS00315;Dbxref=GenBank:WP_059854998.1;Name=WP_059854998.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009955133.1;locus_tag=LDO49_RS00315;product=cytochrome c oxidase assembly protein;protein_id=WP_059854998.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 44072 44557 . - . ID=gene-LDO49_RS00320;Name=LDO49_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00320;old_locus_tag=BCEP4_100040 NZ_CAJZAV010000002.1 Protein Homology CDS 44072 44557 . - 0 ID=cds-WP_021163094.1;Parent=gene-LDO49_RS00320;Dbxref=GenBank:WP_021163094.1;Name=WP_021163094.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544961.1;locus_tag=LDO49_RS00320;product=GNAT family N-acetyltransferase;protein_id=WP_021163094.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 44685 45557 . - . ID=gene-LDO49_RS00325;Name=LDO49_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00325;old_locus_tag=BCEP4_100041 NZ_CAJZAV010000002.1 Protein Homology CDS 44685 45557 . - 0 ID=cds-WP_027787992.1;Parent=gene-LDO49_RS00325;Dbxref=GenBank:WP_027787992.1;Name=WP_027787992.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532092.1;locus_tag=LDO49_RS00325;product=pirin family protein;protein_id=WP_027787992.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 45667 46584 . + . ID=gene-LDO49_RS00330;Name=LDO49_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00330;old_locus_tag=BCEP4_100042 NZ_CAJZAV010000002.1 Protein Homology CDS 45667 46584 . + 0 ID=cds-WP_224051290.1;Parent=gene-LDO49_RS00330;Dbxref=GenBank:WP_224051290.1;Name=WP_224051290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333193.1;locus_tag=LDO49_RS00330;product=LysR family transcriptional regulator;protein_id=WP_224051290.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 46687 47190 . + . ID=gene-LDO49_RS00335;Name=LDO49_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00335;old_locus_tag=BCEP4_100043 NZ_CAJZAV010000002.1 Protein Homology CDS 46687 47190 . + 0 ID=cds-WP_060072830.1;Parent=gene-LDO49_RS00335;Dbxref=GenBank:WP_060072830.1;Name=WP_060072830.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363421.1;locus_tag=LDO49_RS00335;product=GAF domain-containing protein;protein_id=WP_060072830.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 47338 48144 . - . ID=gene-LDO49_RS00340;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=LDO49_RS00340;old_locus_tag=BCEP4_100044 NZ_CAJZAV010000002.1 Protein Homology CDS 47338 48144 . - 0 ID=cds-WP_021163090.1;Parent=gene-LDO49_RS00340;Dbxref=GenBank:WP_021163090.1;Name=WP_021163090.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751860.1;locus_tag=LDO49_RS00340;product=type I methionyl aminopeptidase;protein_id=WP_021163090.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 48144 48380 . - . ID=gene-LDO49_RS00345;Name=LDO49_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00345;old_locus_tag=BCEP4_100045 NZ_CAJZAV010000002.1 Protein Homology CDS 48144 48380 . - 0 ID=cds-WP_021163089.1;Parent=gene-LDO49_RS00345;Dbxref=GenBank:WP_021163089.1;Name=WP_021163089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722737.1;locus_tag=LDO49_RS00345;product=ParD-like family protein;protein_id=WP_021163089.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 48534 49154 . + . ID=gene-LDO49_RS00350;Name=LDO49_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00350;old_locus_tag=BCEP4_100046 NZ_CAJZAV010000002.1 Protein Homology CDS 48534 49154 . + 0 ID=cds-WP_060072828.1;Parent=gene-LDO49_RS00350;Dbxref=GenBank:WP_060072828.1;Name=WP_060072828.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544955.1;locus_tag=LDO49_RS00350;product=helix-turn-helix domain-containing protein;protein_id=WP_060072828.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 49214 49762 . + . ID=gene-LDO49_RS00355;Name=LDO49_RS00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00355;old_locus_tag=BCEP4_100047 NZ_CAJZAV010000002.1 Protein Homology CDS 49214 49762 . + 0 ID=cds-WP_060072826.1;Parent=gene-LDO49_RS00355;Dbxref=GenBank:WP_060072826.1;Name=WP_060072826.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482197.1;locus_tag=LDO49_RS00355;product=GNAT family N-acetyltransferase;protein_id=WP_060072826.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 49878 50321 . - . ID=gene-LDO49_RS00360;Name=LDO49_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00360;old_locus_tag=BCEP4_100048 NZ_CAJZAV010000002.1 Protein Homology CDS 49878 50321 . - 0 ID=cds-WP_224051291.1;Parent=gene-LDO49_RS00360;Dbxref=GenBank:WP_224051291.1;Name=WP_224051291.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548186.1;locus_tag=LDO49_RS00360;product=GNAT family N-acetyltransferase;protein_id=WP_224051291.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 51074 51466 . + . ID=gene-LDO49_RS00365;Name=LDO49_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00365;old_locus_tag=BCEP4_100051 NZ_CAJZAV010000002.1 Protein Homology CDS 51074 51466 . + 0 ID=cds-WP_060072822.1;Parent=gene-LDO49_RS00365;Dbxref=GenBank:WP_060072822.1;Name=WP_060072822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008648220.1;locus_tag=LDO49_RS00365;product=DUF2513 domain-containing protein;protein_id=WP_060072822.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 51590 52327 . + . ID=gene-LDO49_RS00370;Name=LDO49_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00370;old_locus_tag=BCEP4_100053 NZ_CAJZAV010000002.1 Protein Homology CDS 51590 52327 . + 0 ID=cds-WP_155634206.1;Parent=gene-LDO49_RS00370;Dbxref=GenBank:WP_155634206.1;Name=WP_155634206.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039499.5;locus_tag=LDO49_RS00370;product=DUF5677 domain-containing protein;protein_id=WP_155634206.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 52571 53185 . - . ID=gene-LDO49_RS00375;Name=LDO49_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00375;old_locus_tag=BCEP4_100054 NZ_CAJZAV010000002.1 GeneMarkS-2+ CDS 52571 53185 . - 0 ID=cds-WP_224051292.1;Parent=gene-LDO49_RS00375;Dbxref=GenBank:WP_224051292.1;Name=WP_224051292.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS00375;product=hypothetical protein;protein_id=WP_224051292.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 53253 54065 . - . ID=gene-LDO49_RS00380;Name=LDO49_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00380;old_locus_tag=BCEP4_100055 NZ_CAJZAV010000002.1 GeneMarkS-2+ CDS 53253 54065 . - 0 ID=cds-WP_155634204.1;Parent=gene-LDO49_RS00380;Dbxref=GenBank:WP_155634204.1;Name=WP_155634204.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS00380;product=hypothetical protein;protein_id=WP_155634204.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 54145 54801 . - . ID=gene-LDO49_RS00385;Name=LDO49_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00385;old_locus_tag=BCEP4_100057 NZ_CAJZAV010000002.1 Protein Homology CDS 54145 54801 . - 0 ID=cds-WP_060072970.1;Parent=gene-LDO49_RS00385;Dbxref=GenBank:WP_060072970.1;Name=WP_060072970.1;Ontology_term=GO:0006974,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497080.1;locus_tag=LDO49_RS00385;product=SOS response-associated peptidase family protein;protein_id=WP_060072970.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 55011 55511 . + . ID=gene-LDO49_RS00390;Name=LDO49_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00390;old_locus_tag=BCEP4_100058 NZ_CAJZAV010000002.1 GeneMarkS-2+ CDS 55011 55511 . + 0 ID=cds-WP_155634203.1;Parent=gene-LDO49_RS00390;Dbxref=GenBank:WP_155634203.1;Name=WP_155634203.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS00390;product=hypothetical protein;protein_id=WP_155634203.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 55536 56252 . - . ID=gene-LDO49_RS00395;Name=LDO49_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00395;old_locus_tag=BCEP4_100059 NZ_CAJZAV010000002.1 GeneMarkS-2+ CDS 55536 56252 . - 0 ID=cds-WP_063812092.1;Parent=gene-LDO49_RS00395;Dbxref=GenBank:WP_063812092.1;Name=WP_063812092.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS00395;product=Imm52 family immunity protein;protein_id=WP_063812092.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 56597 56670 . - . ID=gene-LDO49_RS00400;Name=LDO49_RS00400;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS00400;old_locus_tag=BCEP4_TRNA47 NZ_CAJZAV010000002.1 tRNAscan-SE tRNA 56597 56670 . - . ID=rna-LDO49_RS00400;Parent=gene-LDO49_RS00400;anticodon=(pos:complement(56636..56638));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS00400;product=tRNA-Cys NZ_CAJZAV010000002.1 tRNAscan-SE exon 56597 56670 . - . ID=exon-LDO49_RS00400-1;Parent=rna-LDO49_RS00400;anticodon=(pos:complement(56636..56638));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS00400;product=tRNA-Cys NZ_CAJZAV010000002.1 RefSeq gene 56868 56943 . - . ID=gene-LDO49_RS00405;Name=LDO49_RS00405;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS00405;old_locus_tag=BCEP4_TRNA46 NZ_CAJZAV010000002.1 tRNAscan-SE tRNA 56868 56943 . - . ID=rna-LDO49_RS00405;Parent=gene-LDO49_RS00405;anticodon=(pos:complement(56908..56910));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS00405;product=tRNA-Gly NZ_CAJZAV010000002.1 tRNAscan-SE exon 56868 56943 . - . ID=exon-LDO49_RS00405-1;Parent=rna-LDO49_RS00405;anticodon=(pos:complement(56908..56910));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS00405;product=tRNA-Gly NZ_CAJZAV010000002.1 RefSeq gene 56997 57072 . - . ID=gene-LDO49_RS00410;Name=LDO49_RS00410;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS00410;old_locus_tag=BCEP4_TRNA45 NZ_CAJZAV010000002.1 tRNAscan-SE tRNA 56997 57072 . - . ID=rna-LDO49_RS00410;Parent=gene-LDO49_RS00410;anticodon=(pos:complement(57037..57039));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS00410;product=tRNA-Gly NZ_CAJZAV010000002.1 tRNAscan-SE exon 56997 57072 . - . ID=exon-LDO49_RS00410-1;Parent=rna-LDO49_RS00410;anticodon=(pos:complement(57037..57039));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS00410;product=tRNA-Gly NZ_CAJZAV010000002.1 RefSeq gene 57210 57797 . - . ID=gene-LDO49_RS00415;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=LDO49_RS00415;old_locus_tag=BCEP4_100062 NZ_CAJZAV010000002.1 Protein Homology CDS 57210 57797 . - 0 ID=cds-WP_021163085.1;Parent=gene-LDO49_RS00415;Dbxref=GenBank:WP_021163085.1;Name=WP_021163085.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544951.1;locus_tag=LDO49_RS00415;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_021163085.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 57888 59933 . - . ID=gene-LDO49_RS00420;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=LDO49_RS00420;old_locus_tag=BCEP4_100063 NZ_CAJZAV010000002.1 Protein Homology CDS 57888 59933 . - 0 ID=cds-WP_060072814.1;Parent=gene-LDO49_RS00420;Dbxref=GenBank:WP_060072814.1;Name=WP_060072814.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544950.1;locus_tag=LDO49_RS00420;product=excinuclease ABC subunit UvrC;protein_id=WP_060072814.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 60010 60667 . + . ID=gene-LDO49_RS37695;Name=earP;end_range=60667,.;gbkey=Gene;gene=earP;gene_biotype=protein_coding;locus_tag=LDO49_RS37695;old_locus_tag=BCEP4_100064;partial=true NZ_CAJZAV010000002.1 Protein Homology CDS 60010 60667 . + 0 ID=cds-WP_443797887.1;Parent=gene-LDO49_RS37695;Dbxref=GenBank:WP_443797887.1;Name=WP_443797887.1;Ontology_term=GO:0106361;end_range=60667,.;gbkey=CDS;gene=earP;go_function=protein-arginine rhamnosyltransferase activity|0106361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751870.1;locus_tag=LDO49_RS37695;partial=true;product=elongation factor P maturation arginine rhamnosyltransferase EarP;protein_id=WP_443797887.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 60678 61005 . + . ID=gene-LDO49_RS37700;Name=earP;end_range=61005,.;gbkey=Gene;gene=earP;gene_biotype=protein_coding;locus_tag=LDO49_RS37700;old_locus_tag=BCEP4_100065;partial=true;start_range=.,60678 NZ_CAJZAV010000002.1 Protein Homology CDS 60678 61005 . + 1 ID=cds-WP_443797888.1;Parent=gene-LDO49_RS37700;Dbxref=GenBank:WP_443797888.1;Name=WP_443797888.1;Ontology_term=GO:0106361;end_range=61005,.;gbkey=CDS;gene=earP;go_function=protein-arginine rhamnosyltransferase activity|0106361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363413.1;locus_tag=LDO49_RS37700;partial=true;product=elongation factor P maturation arginine rhamnosyltransferase EarP;protein_id=WP_443797888.1;start_range=.,60678;transl_table=11 NZ_CAJZAV010000002.1 RefSeq pseudogene 61016 61133 . + . ID=gene-LDO49_RS37705;Name=LDO49_RS37705;end_range=61133,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37705;partial=true;pseudo=true;start_range=.,61016 NZ_CAJZAV010000002.1 Protein Homology CDS 61016 61133 . + 2 ID=cds-LDO49_RS37705;Parent=gene-LDO49_RS37705;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=61133,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021598.6;locus_tag=LDO49_RS37705;partial=true;product=hypothetical protein;pseudo=true;start_range=.,61016;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 61340 61897 . + . ID=gene-LDO49_RS00430;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=LDO49_RS00430;old_locus_tag=BCEP4_100066 NZ_CAJZAV010000002.1 Protein Homology CDS 61340 61897 . + 0 ID=cds-WP_011351421.1;Parent=gene-LDO49_RS00430;Dbxref=GenBank:WP_011351421.1;Name=WP_011351421.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883975.1;locus_tag=LDO49_RS00430;product=elongation factor P;protein_id=WP_011351421.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 62167 63552 . + . ID=gene-LDO49_RS00435;Name=LDO49_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00435;old_locus_tag=BCEP4_100067 NZ_CAJZAV010000002.1 Protein Homology CDS 62167 63552 . + 0 ID=cds-WP_027788001.1;Parent=gene-LDO49_RS00435;Dbxref=GenBank:WP_027788001.1;Name=WP_027788001.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401253.1;locus_tag=LDO49_RS00435;product=sigma-54-dependent transcriptional regulator;protein_id=WP_027788001.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 63748 64776 . - . ID=gene-LDO49_RS00440;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=LDO49_RS00440;old_locus_tag=BCEP4_100069 NZ_CAJZAV010000002.1 Protein Homology CDS 63748 64776 . - 0 ID=cds-WP_021159684.1;Parent=gene-LDO49_RS00440;Dbxref=GenBank:WP_021159684.1;Name=WP_021159684.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897642.1;locus_tag=LDO49_RS00440;product=beta-N-acetylhexosaminidase;protein_id=WP_021159684.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 64793 65221 . - . ID=gene-LDO49_RS00445;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=LDO49_RS00445;old_locus_tag=BCEP4_100070 NZ_CAJZAV010000002.1 Protein Homology CDS 64793 65221 . - 0 ID=cds-WP_021159685.1;Parent=gene-LDO49_RS00445;Dbxref=GenBank:WP_021159685.1;Name=WP_021159685.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762395.1;locus_tag=LDO49_RS00445;product=holo-ACP synthase;protein_id=WP_021159685.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 65294 66070 . - . ID=gene-LDO49_RS00450;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=LDO49_RS00450;old_locus_tag=BCEP4_100071 NZ_CAJZAV010000002.1 Protein Homology CDS 65294 66070 . - 0 ID=cds-WP_060072810.1;Parent=gene-LDO49_RS00450;Dbxref=GenBank:WP_060072810.1;Name=WP_060072810.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762396.1;locus_tag=LDO49_RS00450;product=pyridoxine 5'-phosphate synthase;protein_id=WP_060072810.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 66067 66903 . - . ID=gene-LDO49_RS00455;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=LDO49_RS00455;old_locus_tag=BCEP4_100072 NZ_CAJZAV010000002.1 Protein Homology CDS 66067 66903 . - 0 ID=cds-WP_021159687.1;Parent=gene-LDO49_RS00455;Dbxref=GenBank:WP_021159687.1;Name=WP_021159687.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351416.1;locus_tag=LDO49_RS00455;product=DNA repair protein RecO;protein_id=WP_021159687.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 66890 67789 . - . ID=gene-LDO49_RS00460;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=LDO49_RS00460;old_locus_tag=BCEP4_100073 NZ_CAJZAV010000002.1 Protein Homology CDS 66890 67789 . - 0 ID=cds-WP_027788003.1;Parent=gene-LDO49_RS00460;Dbxref=GenBank:WP_027788003.1;Name=WP_027788003.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009913163.1;locus_tag=LDO49_RS00460;product=GTPase Era;protein_id=WP_027788003.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 67850 69088 . - . ID=gene-LDO49_RS00465;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=LDO49_RS00465;old_locus_tag=BCEP4_100074 NZ_CAJZAV010000002.1 Protein Homology CDS 67850 69088 . - 0 ID=cds-WP_060072808.1;Parent=gene-LDO49_RS00465;Dbxref=GenBank:WP_060072808.1;Name=WP_060072808.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408140.1;locus_tag=LDO49_RS00465;product=ribonuclease III;protein_id=WP_060072808.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 69242 70135 . - . ID=gene-LDO49_RS00470;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=LDO49_RS00470;old_locus_tag=BCEP4_100075 NZ_CAJZAV010000002.1 Protein Homology CDS 69242 70135 . - 0 ID=cds-WP_060072806.1;Parent=gene-LDO49_RS00470;Dbxref=GenBank:WP_060072806.1;Name=WP_060072806.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890017.1;locus_tag=LDO49_RS00470;product=signal peptidase I;protein_id=WP_060072806.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 70152 71945 . - . ID=gene-LDO49_RS00475;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=LDO49_RS00475;old_locus_tag=BCEP4_100076 NZ_CAJZAV010000002.1 Protein Homology CDS 70152 71945 . - 0 ID=cds-WP_021159691.1;Parent=gene-LDO49_RS00475;Dbxref=GenBank:WP_021159691.1;Name=WP_021159691.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897649.1;locus_tag=LDO49_RS00475;product=translation elongation factor 4;protein_id=WP_021159691.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 72145 72381 . - . ID=gene-LDO49_RS00480;Name=LDO49_RS00480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00480;old_locus_tag=BCEP4_100077 NZ_CAJZAV010000002.1 Protein Homology CDS 72145 72381 . - 0 ID=cds-WP_027788006.1;Parent=gene-LDO49_RS00480;Dbxref=GenBank:WP_027788006.1;Name=WP_027788006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476497.1;locus_tag=LDO49_RS00480;product=glutaredoxin family protein;protein_id=WP_027788006.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 72389 73891 . - . ID=gene-LDO49_RS00485;Name=LDO49_RS00485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00485;old_locus_tag=BCEP4_100078 NZ_CAJZAV010000002.1 Protein Homology CDS 72389 73891 . - 0 ID=cds-WP_021159693.1;Parent=gene-LDO49_RS00485;Dbxref=GenBank:WP_021159693.1;Name=WP_021159693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401265.1;locus_tag=LDO49_RS00485;product=DegQ family serine endoprotease;protein_id=WP_021159693.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 73908 74960 . - . ID=gene-LDO49_RS00490;Name=LDO49_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00490;old_locus_tag=BCEP4_100079 NZ_CAJZAV010000002.1 Protein Homology CDS 73908 74960 . - 0 ID=cds-WP_021159694.1;Parent=gene-LDO49_RS00490;Dbxref=GenBank:WP_021159694.1;Name=WP_021159694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192760.1;locus_tag=LDO49_RS00490;product=MucB/RseB C-terminal domain-containing protein;protein_id=WP_021159694.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 74966 75583 . - . ID=gene-LDO49_RS00495;Name=LDO49_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00495;old_locus_tag=BCEP4_100080 NZ_CAJZAV010000002.1 Protein Homology CDS 74966 75583 . - 0 ID=cds-WP_027788009.1;Parent=gene-LDO49_RS00495;Dbxref=GenBank:WP_027788009.1;Name=WP_027788009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415543.1;locus_tag=LDO49_RS00495;product=sigma-E factor negative regulatory protein;protein_id=WP_027788009.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 75670 76269 . - . ID=gene-LDO49_RS00500;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=LDO49_RS00500;old_locus_tag=BCEP4_100081 NZ_CAJZAV010000002.1 Protein Homology CDS 75670 76269 . - 0 ID=cds-WP_006490873.1;Parent=gene-LDO49_RS00500;Dbxref=GenBank:WP_006490873.1;Name=WP_006490873.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883961.1;locus_tag=LDO49_RS00500;product=RNA polymerase sigma factor RpoE;protein_id=WP_006490873.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 76361 76825 . - . ID=gene-LDO49_RS00505;Name=LDO49_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00505;old_locus_tag=BCEP4_100082 NZ_CAJZAV010000002.1 Protein Homology CDS 76361 76825 . - 0 ID=cds-WP_021159696.1;Parent=gene-LDO49_RS00505;Dbxref=GenBank:WP_021159696.1;Name=WP_021159696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213793.1;locus_tag=LDO49_RS00505;product=hypothetical protein;protein_id=WP_021159696.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 76838 78070 . - . ID=gene-LDO49_RS00510;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=LDO49_RS00510;old_locus_tag=BCEP4_100083 NZ_CAJZAV010000002.1 Protein Homology CDS 76838 78070 . - 0 ID=cds-WP_060072804.1;Parent=gene-LDO49_RS00510;Dbxref=GenBank:WP_060072804.1;Name=WP_060072804.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752488.1;locus_tag=LDO49_RS00510;product=beta-ketoacyl-ACP synthase II;protein_id=WP_060072804.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 78238 78477 . - . ID=gene-LDO49_RS00515;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=LDO49_RS00515;old_locus_tag=BCEP4_100084 NZ_CAJZAV010000002.1 Protein Homology CDS 78238 78477 . - 0 ID=cds-WP_004197638.1;Parent=gene-LDO49_RS00515;Dbxref=GenBank:WP_004197638.1;Name=WP_004197638.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735022.1;locus_tag=LDO49_RS00515;product=acyl carrier protein;protein_id=WP_004197638.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 78622 79371 . - . ID=gene-LDO49_RS00520;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LDO49_RS00520;old_locus_tag=BCEP4_100085 NZ_CAJZAV010000002.1 Protein Homology CDS 78622 79371 . - 0 ID=cds-WP_006476504.1;Parent=gene-LDO49_RS00520;Dbxref=GenBank:WP_006476504.1;Name=WP_006476504.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192016.1;locus_tag=LDO49_RS00520;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_006476504.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 79408 80340 . - . ID=gene-LDO49_RS00525;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=LDO49_RS00525;old_locus_tag=BCEP4_100086 NZ_CAJZAV010000002.1 Protein Homology CDS 79408 80340 . - 0 ID=cds-WP_042975162.1;Parent=gene-LDO49_RS00525;Dbxref=GenBank:WP_042975162.1;Name=WP_042975162.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025800.1;locus_tag=LDO49_RS00525;product=ACP S-malonyltransferase;protein_id=WP_042975162.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 80424 81413 . - . ID=gene-LDO49_RS00530;Name=LDO49_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00530;old_locus_tag=BCEP4_100087 NZ_CAJZAV010000002.1 Protein Homology CDS 80424 81413 . - 0 ID=cds-WP_042975163.1;Parent=gene-LDO49_RS00530;Dbxref=GenBank:WP_042975163.1;Name=WP_042975163.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010105339.1;locus_tag=LDO49_RS00530;product=beta-ketoacyl-ACP synthase III;protein_id=WP_042975163.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 81414 82520 . - . ID=gene-LDO49_RS00535;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=LDO49_RS00535;old_locus_tag=BCEP4_100088 NZ_CAJZAV010000002.1 Protein Homology CDS 81414 82520 . - 0 ID=cds-WP_059486575.1;Parent=gene-LDO49_RS00535;Dbxref=GenBank:WP_059486575.1;Name=WP_059486575.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764798.1;locus_tag=LDO49_RS00535;product=phosphate acyltransferase PlsX;protein_id=WP_059486575.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 82650 82829 . - . ID=gene-LDO49_RS00540;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=LDO49_RS00540;old_locus_tag=BCEP4_100089 NZ_CAJZAV010000002.1 Protein Homology CDS 82650 82829 . - 0 ID=cds-WP_006051932.1;Parent=gene-LDO49_RS00540;Dbxref=GenBank:WP_006051932.1;Name=WP_006051932.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889986.1;locus_tag=LDO49_RS00540;product=50S ribosomal protein L32;protein_id=WP_006051932.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 82928 83566 . - . ID=gene-LDO49_RS00545;Name=LDO49_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00545;old_locus_tag=BCEP4_100090 NZ_CAJZAV010000002.1 Protein Homology CDS 82928 83566 . - 0 ID=cds-WP_059486572.1;Parent=gene-LDO49_RS00545;Dbxref=GenBank:WP_059486572.1;Name=WP_059486572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656341.1;locus_tag=LDO49_RS00545;product=DUF177 domain-containing protein;protein_id=WP_059486572.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 83788 84420 . + . ID=gene-LDO49_RS00550;Name=LDO49_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00550;old_locus_tag=BCEP4_100091 NZ_CAJZAV010000002.1 Protein Homology CDS 83788 84420 . + 0 ID=cds-WP_060072802.1;Parent=gene-LDO49_RS00550;Dbxref=GenBank:WP_060072802.1;Name=WP_060072802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489696.1;locus_tag=LDO49_RS00550;product=Maf-like protein;protein_id=WP_060072802.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 84417 85139 . + . ID=gene-LDO49_RS00555;Name=LDO49_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00555;old_locus_tag=BCEP4_100092 NZ_CAJZAV010000002.1 Protein Homology CDS 84417 85139 . + 0 ID=cds-WP_027788014.1;Parent=gene-LDO49_RS00555;Dbxref=GenBank:WP_027788014.1;Name=WP_027788014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883942.1;locus_tag=LDO49_RS00555;product=SAM-dependent methyltransferase;protein_id=WP_027788014.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 85201 86193 . - . ID=gene-LDO49_RS00560;Name=LDO49_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00560;old_locus_tag=BCEP4_100093 NZ_CAJZAV010000002.1 Protein Homology CDS 85201 86193 . - 0 ID=cds-WP_048022963.1;Parent=gene-LDO49_RS00560;Dbxref=GenBank:WP_048022963.1;Name=WP_048022963.1;Ontology_term=GO:0006465,GO:0006508,GO:0008236,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type peptidase activity|0008236||IEA;go_process=signal peptide processing|0006465||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351398.1;locus_tag=LDO49_RS00560;product=S49 family peptidase;protein_id=WP_048022963.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 86206 86607 . - . ID=gene-LDO49_RS00565;Name=LDO49_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00565;old_locus_tag=BCEP4_100094 NZ_CAJZAV010000002.1 Protein Homology CDS 86206 86607 . - 0 ID=cds-WP_048022961.1;Parent=gene-LDO49_RS00565;Dbxref=GenBank:WP_048022961.1;Name=WP_048022961.1;Ontology_term=GO:0046872,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493745.1;locus_tag=LDO49_RS00565;product=Rieske (2Fe-2S) protein;protein_id=WP_048022961.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 86604 87263 . - . ID=gene-LDO49_RS00570;Name=LDO49_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00570;old_locus_tag=BCEP4_100095 NZ_CAJZAV010000002.1 Protein Homology CDS 86604 87263 . - 0 ID=cds-WP_060072800.1;Parent=gene-LDO49_RS00570;Dbxref=GenBank:WP_060072800.1;Name=WP_060072800.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351396.1;locus_tag=LDO49_RS00570;product=HAD-IA family hydrolase;protein_id=WP_060072800.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 87275 88279 . - . ID=gene-LDO49_RS00575;Name=LDO49_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00575;old_locus_tag=BCEP4_100096 NZ_CAJZAV010000002.1 Protein Homology CDS 87275 88279 . - 0 ID=cds-WP_059589887.1;Parent=gene-LDO49_RS00575;Dbxref=GenBank:WP_059589887.1;Name=WP_059589887.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467543.1;locus_tag=LDO49_RS00575;product=RluA family pseudouridine synthase;protein_id=WP_059589887.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 89001 92129 . + . ID=gene-LDO49_RS00580;Name=LDO49_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00580;old_locus_tag=BCEP4_100097 NZ_CAJZAV010000002.1 Protein Homology CDS 89001 92129 . + 0 ID=cds-WP_060072798.1;Parent=gene-LDO49_RS00580;Dbxref=GenBank:WP_060072798.1;Name=WP_060072798.1;Ontology_term=GO:0006396,GO:0006397,GO:0003723,GO:0004519,GO:0004540,GO:0046872;gbkey=CDS;go_function=RNA binding|0003723||IEA,endonuclease activity|0004519||IEA,RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=RNA processing|0006396||IEA,mRNA processing|0006397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544929.1;locus_tag=LDO49_RS00580;product=Rne/Rng family ribonuclease;protein_id=WP_060072798.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 92261 93373 . + . ID=gene-LDO49_RS00585;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=LDO49_RS00585;old_locus_tag=BCEP4_100098 NZ_CAJZAV010000002.1 Protein Homology CDS 92261 93373 . + 0 ID=cds-WP_224051293.1;Parent=gene-LDO49_RS00585;Dbxref=GenBank:WP_224051293.1;Name=WP_224051293.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213801.1;locus_tag=LDO49_RS00585;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_224051293.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 93401 94018 . + . ID=gene-LDO49_RS00590;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=LDO49_RS00590;old_locus_tag=BCEP4_100099 NZ_CAJZAV010000002.1 Protein Homology CDS 93401 94018 . + 0 ID=cds-WP_048022956.1;Parent=gene-LDO49_RS00590;Dbxref=GenBank:WP_048022956.1;Name=WP_048022956.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488635.1;locus_tag=LDO49_RS00590;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_048022956.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 94124 95422 . + . ID=gene-LDO49_RS00595;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=LDO49_RS00595;old_locus_tag=BCEP4_100100 NZ_CAJZAV010000002.1 Protein Homology CDS 94124 95422 . + 0 ID=cds-WP_060072796.1;Parent=gene-LDO49_RS00595;Dbxref=GenBank:WP_060072796.1;Name=WP_060072796.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883925.1;locus_tag=LDO49_RS00595;product=molybdopterin molybdotransferase MoeA;protein_id=WP_060072796.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 95462 95737 . + . ID=gene-LDO49_RS00600;Name=LDO49_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00600;old_locus_tag=BCEP4_100102 NZ_CAJZAV010000002.1 Protein Homology CDS 95462 95737 . + 0 ID=cds-WP_006401288.1;Parent=gene-LDO49_RS00600;Dbxref=GenBank:WP_006401288.1;Name=WP_006401288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192965.1;locus_tag=LDO49_RS00600;product=hypothetical protein;protein_id=WP_006401288.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 95734 96219 . + . ID=gene-LDO49_RS00605;Name=LDO49_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00605;old_locus_tag=BCEP4_100101 NZ_CAJZAV010000002.1 Protein Homology CDS 95734 96219 . + 0 ID=cds-WP_027788021.1;Parent=gene-LDO49_RS00605;Dbxref=GenBank:WP_027788021.1;Name=WP_027788021.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544925.1;locus_tag=LDO49_RS00605;product=GNAT family N-acetyltransferase;protein_id=WP_027788021.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 96308 97786 . - . ID=gene-LDO49_RS00610;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=LDO49_RS00610;old_locus_tag=BCEP4_100103 NZ_CAJZAV010000002.1 Protein Homology CDS 96308 97786 . - 0 ID=cds-WP_021159713.1;Parent=gene-LDO49_RS00610;Dbxref=GenBank:WP_021159713.1;Name=WP_021159713.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476522.1;locus_tag=LDO49_RS00610;product=DNA recombination protein RmuC;protein_id=WP_021159713.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 97783 98772 . - . ID=gene-LDO49_RS00615;Name=LDO49_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00615;old_locus_tag=BCEP4_100104 NZ_CAJZAV010000002.1 Protein Homology CDS 97783 98772 . - 0 ID=cds-WP_060072966.1;Parent=gene-LDO49_RS00615;Dbxref=GenBank:WP_060072966.1;Name=WP_060072966.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544923.1;locus_tag=LDO49_RS00615;product=2-hydroxyacid dehydrogenase;protein_id=WP_060072966.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 98854 100284 . - . ID=gene-LDO49_RS00620;Name=LDO49_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00620;old_locus_tag=BCEP4_100105 NZ_CAJZAV010000002.1 Protein Homology CDS 98854 100284 . - 0 ID=cds-WP_021159715.1;Parent=gene-LDO49_RS00620;Dbxref=GenBank:WP_021159715.1;Name=WP_021159715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764816.1;locus_tag=LDO49_RS00620;product=sodium:proton antiporter;protein_id=WP_021159715.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 100328 100990 . - . ID=gene-LDO49_RS00625;Name=LDO49_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00625;old_locus_tag=BCEP4_100106 NZ_CAJZAV010000002.1 Protein Homology CDS 100328 100990 . - 0 ID=cds-WP_059649268.1;Parent=gene-LDO49_RS00625;Dbxref=GenBank:WP_059649268.1;Name=WP_059649268.1;Ontology_term=GO:0006089;gbkey=CDS;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363387.1;locus_tag=LDO49_RS00625;product=LutC/YkgG family protein;protein_id=WP_059649268.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 101079 102278 . - . ID=gene-LDO49_RS00630;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=LDO49_RS00630;old_locus_tag=BCEP4_100107 NZ_CAJZAV010000002.1 Protein Homology CDS 101079 102278 . - 0 ID=cds-WP_059498126.1;Parent=gene-LDO49_RS00630;Dbxref=GenBank:WP_059498126.1;Name=WP_059498126.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656325.1;locus_tag=LDO49_RS00630;product=nicotinate phosphoribosyltransferase;protein_id=WP_059498126.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 102579 102902 . + . ID=gene-LDO49_RS00635;Name=fdxA;gbkey=Gene;gene=fdxA;gene_biotype=protein_coding;locus_tag=LDO49_RS00635;old_locus_tag=BCEP4_100108 NZ_CAJZAV010000002.1 Protein Homology CDS 102579 102902 . + 0 ID=cds-WP_011351384.1;Parent=gene-LDO49_RS00635;Dbxref=GenBank:WP_011351384.1;Name=WP_011351384.1;Ontology_term=GO:0009055,GO:0051539;gbkey=CDS;gene=fdxA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697054.1;locus_tag=LDO49_RS00635;product=ferredoxin FdxA;protein_id=WP_011351384.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 103005 103080 . + . ID=gene-LDO49_RS00640;Name=LDO49_RS00640;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS00640;old_locus_tag=BCEP4_TRNA6 NZ_CAJZAV010000002.1 tRNAscan-SE tRNA 103005 103080 . + . ID=rna-LDO49_RS00640;Parent=gene-LDO49_RS00640;anticodon=(pos:103038..103040);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS00640;product=tRNA-Asn NZ_CAJZAV010000002.1 tRNAscan-SE exon 103005 103080 . + . ID=exon-LDO49_RS00640-1;Parent=rna-LDO49_RS00640;anticodon=(pos:103038..103040);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS00640;product=tRNA-Asn NZ_CAJZAV010000002.1 RefSeq gene 103152 103227 . + . ID=gene-LDO49_RS00645;Name=LDO49_RS00645;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS00645;old_locus_tag=BCEP4_TRNA7 NZ_CAJZAV010000002.1 tRNAscan-SE tRNA 103152 103227 . + . ID=rna-LDO49_RS00645;Parent=gene-LDO49_RS00645;anticodon=(pos:103185..103187);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS00645;product=tRNA-Asn NZ_CAJZAV010000002.1 tRNAscan-SE exon 103152 103227 . + . ID=exon-LDO49_RS00645-1;Parent=rna-LDO49_RS00645;anticodon=(pos:103185..103187);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS00645;product=tRNA-Asn NZ_CAJZAV010000002.1 RefSeq gene 103347 103832 . + . ID=gene-LDO49_RS00650;Name=LDO49_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00650;old_locus_tag=BCEP4_100109 NZ_CAJZAV010000002.1 Protein Homology CDS 103347 103832 . + 0 ID=cds-WP_027788025.1;Parent=gene-LDO49_RS00650;Dbxref=GenBank:WP_027788025.1;Name=WP_027788025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656324.1;locus_tag=LDO49_RS00650;product=CreA family protein;protein_id=WP_027788025.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 103894 104793 . + . ID=gene-LDO49_RS00655;Name=LDO49_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00655;old_locus_tag=BCEP4_100110 NZ_CAJZAV010000002.1 Protein Homology CDS 103894 104793 . + 0 ID=cds-WP_060072794.1;Parent=gene-LDO49_RS00655;Dbxref=GenBank:WP_060072794.1;Name=WP_060072794.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486200.1;locus_tag=LDO49_RS00655;product=AraC family transcriptional regulator;protein_id=WP_060072794.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 104917 105684 . + . ID=gene-LDO49_RS00660;Name=LDO49_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00660;old_locus_tag=BCEP4_100111 NZ_CAJZAV010000002.1 Protein Homology CDS 104917 105684 . + 0 ID=cds-WP_059555220.1;Parent=gene-LDO49_RS00660;Dbxref=GenBank:WP_059555220.1;Name=WP_059555220.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694222.1;locus_tag=LDO49_RS00660;product=AzlC family ABC transporter permease;protein_id=WP_059555220.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 105681 106019 . + . ID=gene-LDO49_RS00665;Name=LDO49_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00665;old_locus_tag=BCEP4_100113 NZ_CAJZAV010000002.1 Protein Homology CDS 105681 106019 . + 0 ID=cds-WP_021159722.1;Parent=gene-LDO49_RS00665;Dbxref=GenBank:WP_021159722.1;Name=WP_021159722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897682.1;locus_tag=LDO49_RS00665;product=AzlD domain-containing protein;protein_id=WP_021159722.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 106181 106963 . + . ID=gene-LDO49_RS00670;Name=LDO49_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00670;old_locus_tag=BCEP4_100112 NZ_CAJZAV010000002.1 Protein Homology CDS 106181 106963 . + 0 ID=cds-WP_021159723.1;Parent=gene-LDO49_RS00670;Dbxref=GenBank:WP_021159723.1;Name=WP_021159723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897683.1;locus_tag=LDO49_RS00670;product=DUF4088 family protein;protein_id=WP_021159723.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 107087 107488 . - . ID=gene-LDO49_RS00675;Name=LDO49_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00675;old_locus_tag=BCEP4_100114 NZ_CAJZAV010000002.1 Protein Homology CDS 107087 107488 . - 0 ID=cds-WP_027788030.1;Parent=gene-LDO49_RS00675;Dbxref=GenBank:WP_027788030.1;Name=WP_027788030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328136.1;locus_tag=LDO49_RS00675;product=hypothetical protein;protein_id=WP_027788030.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 107758 107976 . + . ID=gene-LDO49_RS00680;Name=LDO49_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00680;old_locus_tag=BCEP4_100115 NZ_CAJZAV010000002.1 Protein Homology CDS 107758 107976 . + 0 ID=cds-WP_021159725.1;Parent=gene-LDO49_RS00680;Dbxref=GenBank:WP_021159725.1;Name=WP_021159725.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753074.1;locus_tag=LDO49_RS00680;product=RNA-binding S4 domain-containing protein;protein_id=WP_021159725.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 108111 109499 . + . ID=gene-LDO49_RS00685;Name=norM;gbkey=Gene;gene=norM;gene_biotype=protein_coding;locus_tag=LDO49_RS00685;old_locus_tag=BCEP4_100116 NZ_CAJZAV010000002.1 Protein Homology CDS 108111 109499 . + 0 ID=cds-WP_021159726.1;Parent=gene-LDO49_RS00685;Dbxref=GenBank:WP_021159726.1;Name=WP_021159726.1;gbkey=CDS;gene=norM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351377.1;locus_tag=LDO49_RS00685;product=multidrug efflux MATE transporter NorM;protein_id=WP_021159726.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 109655 111049 . + . ID=gene-LDO49_RS00690;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=LDO49_RS00690;old_locus_tag=BCEP4_100117 NZ_CAJZAV010000002.1 Protein Homology CDS 109655 111049 . + 0 ID=cds-WP_060072792.1;Parent=gene-LDO49_RS00690;Dbxref=GenBank:WP_060072792.1;Name=WP_060072792.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532308.1;locus_tag=LDO49_RS00690;product=class II fumarate hydratase;protein_id=WP_060072792.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 111121 111633 . - . ID=gene-LDO49_RS00695;Name=LDO49_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00695;old_locus_tag=BCEP4_100118 NZ_CAJZAV010000002.1 Protein Homology CDS 111121 111633 . - 0 ID=cds-WP_012328135.1;Parent=gene-LDO49_RS00695;Dbxref=GenBank:WP_012328135.1;Name=WP_012328135.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400680.1;locus_tag=LDO49_RS00695;product=acyl-CoA thioesterase;protein_id=WP_012328135.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 111764 111904 . - . ID=gene-LDO49_RS00700;Name=LDO49_RS00700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00700 NZ_CAJZAV010000002.1 Protein Homology CDS 111764 111904 . - 0 ID=cds-WP_165765577.1;Parent=gene-LDO49_RS00700;Dbxref=GenBank:WP_165765577.1;Name=WP_165765577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753078.1;locus_tag=LDO49_RS00700;product=hypothetical protein;protein_id=WP_165765577.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 112100 112807 . + . ID=gene-LDO49_RS00705;Name=LDO49_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00705;old_locus_tag=BCEP4_100119 NZ_CAJZAV010000002.1 Protein Homology CDS 112100 112807 . + 0 ID=cds-WP_027788033.1;Parent=gene-LDO49_RS00705;Dbxref=GenBank:WP_027788033.1;Name=WP_027788033.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757661.1;locus_tag=LDO49_RS00705;product=ArsR/SmtB family transcription factor;protein_id=WP_027788033.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 112970 114449 . + . ID=gene-LDO49_RS37710;Name=LDO49_RS37710;end_range=114449,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37710;old_locus_tag=BCEP4_100120;partial=true NZ_CAJZAV010000002.1 Protein Homology CDS 112970 114449 . + 0 ID=cds-WP_443797889.1;Parent=gene-LDO49_RS37710;Dbxref=GenBank:WP_443797889.1;Name=WP_443797889.1;end_range=114449,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042645.4;locus_tag=LDO49_RS37710;partial=true;product=DUF6600 domain-containing protein;protein_id=WP_443797889.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq pseudogene 114460 114973 . + . ID=gene-LDO49_RS37715;Name=LDO49_RS37715;end_range=114973,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37715;old_locus_tag=BCEP4_100121;partial=true;pseudo=true;start_range=.,114460 NZ_CAJZAV010000002.1 Protein Homology CDS 114460 114973 . + 2 ID=cds-LDO49_RS37715;Parent=gene-LDO49_RS37715;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=114973,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011807761.1;locus_tag=LDO49_RS37715;partial=true;product=DUF6600 domain-containing protein;pseudo=true;start_range=.,114460;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 115447 116418 . - . ID=gene-LDO49_RS00715;Name=LDO49_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00715;old_locus_tag=BCEP4_100122 NZ_CAJZAV010000002.1 Protein Homology CDS 115447 116418 . - 0 ID=cds-WP_021159729.1;Parent=gene-LDO49_RS00715;Dbxref=GenBank:WP_021159729.1;Name=WP_021159729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400684.1;locus_tag=LDO49_RS00715;product=thymidylate synthase;protein_id=WP_021159729.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 116460 117857 . - . ID=gene-LDO49_RS00720;Name=LDO49_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00720;old_locus_tag=BCEP4_100123 NZ_CAJZAV010000002.1 Protein Homology CDS 116460 117857 . - 0 ID=cds-WP_021159730.1;Parent=gene-LDO49_RS00720;Dbxref=GenBank:WP_021159730.1;Name=WP_021159730.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486860.1;locus_tag=LDO49_RS00720;product=sigma-54 dependent transcriptional regulator;protein_id=WP_021159730.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 118467 118685 . + . ID=gene-LDO49_RS00725;Name=LDO49_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00725 NZ_CAJZAV010000002.1 GeneMarkS-2+ CDS 118467 118685 . + 0 ID=cds-WP_224051294.1;Parent=gene-LDO49_RS00725;Dbxref=GenBank:WP_224051294.1;Name=WP_224051294.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS00725;product=hypothetical protein;protein_id=WP_224051294.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 118956 119456 . + . ID=gene-LDO49_RS00730;Name=LDO49_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00730;old_locus_tag=BCEP4_100126 NZ_CAJZAV010000002.1 Protein Homology CDS 118956 119456 . + 0 ID=cds-WP_048022935.1;Parent=gene-LDO49_RS00730;Dbxref=GenBank:WP_048022935.1;Name=WP_048022935.1;Ontology_term=GO:0046654,GO:0004146,GO:0050661;gbkey=CDS;go_function=dihydrofolate reductase activity|0004146||IEA,NADP binding|0050661||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897695.1;locus_tag=LDO49_RS00730;product=dihydrofolate reductase;protein_id=WP_048022935.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 119544 120914 . - . ID=gene-LDO49_RS00735;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=LDO49_RS00735;old_locus_tag=BCEP4_100127 NZ_CAJZAV010000002.1 Protein Homology CDS 119544 120914 . - 0 ID=cds-WP_027788039.1;Parent=gene-LDO49_RS00735;Dbxref=GenBank:WP_027788039.1;Name=WP_027788039.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180925.1;locus_tag=LDO49_RS00735;product=metalloprotease PmbA;protein_id=WP_027788039.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 121042 121644 . + . ID=gene-LDO49_RS00740;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=LDO49_RS00740;old_locus_tag=BCEP4_100128 NZ_CAJZAV010000002.1 Protein Homology CDS 121042 121644 . + 0 ID=cds-WP_272481918.1;Parent=gene-LDO49_RS00740;Dbxref=GenBank:WP_272481918.1;Name=WP_272481918.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363370.1;locus_tag=LDO49_RS00740;product=ribosome biogenesis factor YjgA;protein_id=WP_272481918.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 121628 122242 . + . ID=gene-LDO49_RS00745;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=LDO49_RS00745;old_locus_tag=BCEP4_100129 NZ_CAJZAV010000002.1 Protein Homology CDS 121628 122242 . + 0 ID=cds-WP_048022994.1;Parent=gene-LDO49_RS00745;Dbxref=GenBank:WP_048022994.1;Name=WP_048022994.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753181.1;locus_tag=LDO49_RS00745;product=molybdopterin adenylyltransferase;protein_id=WP_048022994.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 122277 122897 . - . ID=gene-LDO49_RS00750;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=LDO49_RS00750;old_locus_tag=BCEP4_100130 NZ_CAJZAV010000002.1 Protein Homology CDS 122277 122897 . - 0 ID=cds-WP_021159736.1;Parent=gene-LDO49_RS00750;Dbxref=GenBank:WP_021159736.1;Name=WP_021159736.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351365.1;locus_tag=LDO49_RS00750;product=oligoribonuclease;protein_id=WP_021159736.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 123015 124274 . + . ID=gene-LDO49_RS00755;Name=LDO49_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00755;old_locus_tag=BCEP4_100131 NZ_CAJZAV010000002.1 Protein Homology CDS 123015 124274 . + 0 ID=cds-WP_048022930.1;Parent=gene-LDO49_RS00755;Dbxref=GenBank:WP_048022930.1;Name=WP_048022930.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601592.1;locus_tag=LDO49_RS00755;product=M48 family metallopeptidase;protein_id=WP_048022930.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 124271 125212 . + . ID=gene-LDO49_RS00760;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=LDO49_RS00760;old_locus_tag=BCEP4_100132 NZ_CAJZAV010000002.1 Protein Homology CDS 124271 125212 . + 0 ID=cds-WP_021159738.1;Parent=gene-LDO49_RS00760;Dbxref=GenBank:WP_021159738.1;Name=WP_021159738.1;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883868.1;locus_tag=LDO49_RS00760;product=ribosome small subunit-dependent GTPase A;protein_id=WP_021159738.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 125280 125597 . + . ID=gene-LDO49_RS00765;Name=LDO49_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00765;old_locus_tag=BCEP4_100133 NZ_CAJZAV010000002.1 Protein Homology CDS 125280 125597 . + 0 ID=cds-WP_021159739.1;Parent=gene-LDO49_RS00765;Dbxref=GenBank:WP_021159739.1;Name=WP_021159739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656301.1;locus_tag=LDO49_RS00765;product=putative signal transducing protein;protein_id=WP_021159739.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 125665 126603 . - . ID=gene-LDO49_RS00770;Name=LDO49_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00770;old_locus_tag=BCEP4_100134 NZ_CAJZAV010000002.1 Protein Homology CDS 125665 126603 . - 0 ID=cds-WP_021159740.1;Parent=gene-LDO49_RS00770;Dbxref=GenBank:WP_021159740.1;Name=WP_021159740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213825.1;locus_tag=LDO49_RS00770;product=CobD/CbiB family protein;protein_id=WP_021159740.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 126724 127410 . - . ID=gene-LDO49_RS00775;Name=LDO49_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00775;old_locus_tag=BCEP4_100135 NZ_CAJZAV010000002.1 Protein Homology CDS 126724 127410 . - 0 ID=cds-WP_021159741.1;Parent=gene-LDO49_RS00775;Dbxref=GenBank:WP_021159741.1;Name=WP_021159741.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486824.1;locus_tag=LDO49_RS00775;product=CoA pyrophosphatase;protein_id=WP_021159741.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 127498 127890 . - . ID=gene-LDO49_RS00780;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=LDO49_RS00780;old_locus_tag=BCEP4_100136 NZ_CAJZAV010000002.1 Protein Homology CDS 127498 127890 . - 0 ID=cds-WP_006753174.1;Parent=gene-LDO49_RS00780;Dbxref=GenBank:WP_006753174.1;Name=WP_006753174.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486838.1;locus_tag=LDO49_RS00780;product=50S ribosomal protein L19;protein_id=WP_006753174.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 128024 128818 . - . ID=gene-LDO49_RS00785;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=LDO49_RS00785;old_locus_tag=BCEP4_100137 NZ_CAJZAV010000002.1 Protein Homology CDS 128024 128818 . - 0 ID=cds-WP_006476548.1;Parent=gene-LDO49_RS00785;Dbxref=GenBank:WP_006476548.1;Name=WP_006476548.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400700.1;locus_tag=LDO49_RS00785;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_006476548.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 128820 129497 . - . ID=gene-LDO49_RS00790;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=LDO49_RS00790;old_locus_tag=BCEP4_100138 NZ_CAJZAV010000002.1 Protein Homology CDS 128820 129497 . - 0 ID=cds-WP_021159743.1;Parent=gene-LDO49_RS00790;Dbxref=GenBank:WP_021159743.1;Name=WP_021159743.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527496.1;locus_tag=LDO49_RS00790;product=ribosome maturation factor RimM;protein_id=WP_021159743.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 129540 129794 . - . ID=gene-LDO49_RS00795;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=LDO49_RS00795;old_locus_tag=BCEP4_100139 NZ_CAJZAV010000002.1 Protein Homology CDS 129540 129794 . - 0 ID=cds-WP_006476550.1;Parent=gene-LDO49_RS00795;Dbxref=GenBank:WP_006476550.1;Name=WP_006476550.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008342343.1;locus_tag=LDO49_RS00795;product=30S ribosomal protein S16;protein_id=WP_006476550.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq pseudogene 129947 131088 . + . ID=gene-LDO49_RS00800;Name=LDO49_RS00800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS00800;pseudo=true NZ_CAJZAV010000002.1 Protein Homology CDS 129947 131088 . + 0 ID=cds-LDO49_RS00800;Parent=gene-LDO49_RS00800;Note=frameshifted;Ontology_term=GO:0016901,GO:0070968;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA,pyrroloquinoline quinone binding|0070968||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351356.1;locus_tag=LDO49_RS00800;product=PQQ-dependent sugar dehydrogenase;pseudo=true;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 131198 131665 . + . ID=gene-LDO49_RS00805;Name=LDO49_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00805;old_locus_tag=BCEP4_100142 NZ_CAJZAV010000002.1 Protein Homology CDS 131198 131665 . + 0 ID=cds-WP_059486875.1;Parent=gene-LDO49_RS00805;Dbxref=GenBank:WP_059486875.1;Name=WP_059486875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600966.1;locus_tag=LDO49_RS00805;product=NINE protein;protein_id=WP_059486875.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 131715 132890 . - . ID=gene-LDO49_RS00810;Name=LDO49_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00810;old_locus_tag=BCEP4_100143 NZ_CAJZAV010000002.1 Protein Homology CDS 131715 132890 . - 0 ID=cds-WP_021159746.1;Parent=gene-LDO49_RS00810;Dbxref=GenBank:WP_021159746.1;Name=WP_021159746.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496530.1;locus_tag=LDO49_RS00810;product=PA0069 family radical SAM protein;protein_id=WP_021159746.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 132992 133480 . - . ID=gene-LDO49_RS00815;Name=LDO49_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00815;old_locus_tag=BCEP4_100144 NZ_CAJZAV010000002.1 Protein Homology CDS 132992 133480 . - 0 ID=cds-WP_042975180.1;Parent=gene-LDO49_RS00815;Dbxref=GenBank:WP_042975180.1;Name=WP_042975180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351353.1;locus_tag=LDO49_RS00815;product=Lrp/AsnC ligand binding domain-containing protein;protein_id=WP_042975180.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 133626 134912 . + . ID=gene-LDO49_RS00820;Name=LDO49_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00820;old_locus_tag=BCEP4_100145 NZ_CAJZAV010000002.1 Protein Homology CDS 133626 134912 . + 0 ID=cds-WP_027788049.1;Parent=gene-LDO49_RS00820;Dbxref=GenBank:WP_027788049.1;Name=WP_027788049.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018433359.1;locus_tag=LDO49_RS00820;product=D-amino acid dehydrogenase;protein_id=WP_027788049.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 135010 136800 . - . ID=gene-LDO49_RS00825;Name=LDO49_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00825;old_locus_tag=BCEP4_100146 NZ_CAJZAV010000002.1 Protein Homology CDS 135010 136800 . - 0 ID=cds-WP_224051295.1;Parent=gene-LDO49_RS00825;Dbxref=GenBank:WP_224051295.1;Name=WP_224051295.1;Ontology_term=GO:0006631,GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904408.1;locus_tag=LDO49_RS00825;product=acyl-CoA dehydrogenase;protein_id=WP_224051295.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 136900 137835 . - . ID=gene-LDO49_RS00830;Name=LDO49_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00830;old_locus_tag=BCEP4_100147 NZ_CAJZAV010000002.1 Protein Homology CDS 136900 137835 . - 0 ID=cds-WP_048026736.1;Parent=gene-LDO49_RS00830;Dbxref=GenBank:WP_048026736.1;Name=WP_048026736.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189890.1;locus_tag=LDO49_RS00830;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_048026736.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 137852 138601 . - . ID=gene-LDO49_RS00835;Name=LDO49_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00835;old_locus_tag=BCEP4_100148 NZ_CAJZAV010000002.1 Protein Homology CDS 137852 138601 . - 0 ID=cds-WP_021157446.1;Parent=gene-LDO49_RS00835;Dbxref=GenBank:WP_021157446.1;Name=WP_021157446.1;Ontology_term=GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189750.1;locus_tag=LDO49_RS00835;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_021157446.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 138830 139624 . - . ID=gene-LDO49_RS00840;Name=LDO49_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00840;old_locus_tag=BCEP4_100149 NZ_CAJZAV010000002.1 Protein Homology CDS 138830 139624 . - 0 ID=cds-WP_059678009.1;Parent=gene-LDO49_RS00840;Dbxref=GenBank:WP_059678009.1;Name=WP_059678009.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544895.1;locus_tag=LDO49_RS00840;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_059678009.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 139656 140309 . - . ID=gene-LDO49_RS00845;Name=LDO49_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00845;old_locus_tag=BCEP4_100150 NZ_CAJZAV010000002.1 Protein Homology CDS 139656 140309 . - 0 ID=cds-WP_006486982.1;Parent=gene-LDO49_RS00845;Dbxref=GenBank:WP_006486982.1;Name=WP_006486982.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016345956.1;locus_tag=LDO49_RS00845;product=methionine ABC transporter permease;protein_id=WP_006486982.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 140299 141333 . - . ID=gene-LDO49_RS00850;Name=LDO49_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00850;old_locus_tag=BCEP4_100151 NZ_CAJZAV010000002.1 Protein Homology CDS 140299 141333 . - 0 ID=cds-WP_027788053.1;Parent=gene-LDO49_RS00850;Dbxref=GenBank:WP_027788053.1;Name=WP_027788053.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889868.1;locus_tag=LDO49_RS00850;product=methionine ABC transporter ATP-binding protein;protein_id=WP_027788053.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 141550 142470 . + . ID=gene-LDO49_RS00855;Name=LDO49_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00855;old_locus_tag=BCEP4_100152 NZ_CAJZAV010000002.1 Protein Homology CDS 141550 142470 . + 0 ID=cds-WP_021157449.1;Parent=gene-LDO49_RS00855;Dbxref=GenBank:WP_021157449.1;Name=WP_021157449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476561.1;locus_tag=LDO49_RS00855;product=alpha/beta hydrolase;protein_id=WP_021157449.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 142501 143424 . - . ID=gene-LDO49_RS00860;Name=LDO49_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00860;old_locus_tag=BCEP4_100153 NZ_CAJZAV010000002.1 Protein Homology CDS 142501 143424 . - 0 ID=cds-WP_021157450.1;Parent=gene-LDO49_RS00860;Dbxref=GenBank:WP_021157450.1;Name=WP_021157450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889864.1;locus_tag=LDO49_RS00860;product=histone deacetylase family protein;protein_id=WP_021157450.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 143468 144811 . + . ID=gene-LDO49_RS00865;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=LDO49_RS00865;old_locus_tag=BCEP4_100154 NZ_CAJZAV010000002.1 Protein Homology CDS 143468 144811 . + 0 ID=cds-WP_081058119.1;Parent=gene-LDO49_RS00865;Dbxref=GenBank:WP_081058119.1;Name=WP_081058119.1;Ontology_term=GO:0009253,GO:0016757;gbkey=CDS;gene=mltB;go_function=glycosyltransferase activity|0016757||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476563.1;locus_tag=LDO49_RS00865;product=lytic murein transglycosylase B;protein_id=WP_081058119.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 144890 145792 . - . ID=gene-LDO49_RS00870;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=LDO49_RS00870;old_locus_tag=BCEP4_100155 NZ_CAJZAV010000002.1 Protein Homology CDS 144890 145792 . - 0 ID=cds-WP_042973431.1;Parent=gene-LDO49_RS00870;Dbxref=GenBank:WP_042973431.1;Name=WP_042973431.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476564.1;locus_tag=LDO49_RS00870;product=cysteine synthase CysM;protein_id=WP_042973431.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 146007 146354 . - . ID=gene-LDO49_RS00875;Name=LDO49_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00875;old_locus_tag=BCEP4_100156 NZ_CAJZAV010000002.1 Protein Homology CDS 146007 146354 . - 0 ID=cds-WP_021157453.1;Parent=gene-LDO49_RS00875;Dbxref=GenBank:WP_021157453.1;Name=WP_021157453.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476565.1;locus_tag=LDO49_RS00875;product=ComEA family DNA-binding protein;protein_id=WP_021157453.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 146428 147420 . - . ID=gene-LDO49_RS00880;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=LDO49_RS00880;old_locus_tag=BCEP4_100157 NZ_CAJZAV010000002.1 Protein Homology CDS 146428 147420 . - 0 ID=cds-WP_048024367.1;Parent=gene-LDO49_RS00880;Dbxref=GenBank:WP_048024367.1;Name=WP_048024367.1;Ontology_term=GO:0005975,GO:0009244,GO:0008712,GO:0050661;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA,NADP binding|0050661||IEA;go_process=carbohydrate metabolic process|0005975||IEA,lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904403.1;locus_tag=LDO49_RS00880;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_048024367.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 147484 148434 . - . ID=gene-LDO49_RS00885;Name=rfaE1;gbkey=Gene;gene=rfaE1;gene_biotype=protein_coding;locus_tag=LDO49_RS00885;old_locus_tag=BCEP4_100158 NZ_CAJZAV010000002.1 Protein Homology CDS 147484 148434 . - 0 ID=cds-WP_059811672.1;Parent=gene-LDO49_RS00885;Dbxref=GenBank:WP_059811672.1;Name=WP_059811672.1;Ontology_term=GO:0005975,GO:0016773,GO:0016779;gbkey=CDS;gene=rfaE1;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363349.1;locus_tag=LDO49_RS00885;product=D-glycero-beta-D-manno-heptose-7-phosphate kinase;protein_id=WP_059811672.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 148442 149842 . - . ID=gene-LDO49_RS00890;Name=LDO49_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00890;old_locus_tag=BCEP4_100159 NZ_CAJZAV010000002.1 Protein Homology CDS 148442 149842 . - 0 ID=cds-WP_060072784.1;Parent=gene-LDO49_RS00890;Dbxref=GenBank:WP_060072784.1;Name=WP_060072784.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010105519.1;locus_tag=LDO49_RS00890;product=UDP-glucose dehydrogenase family protein;protein_id=WP_060072784.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 149933 151105 . - . ID=gene-LDO49_RS00895;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=LDO49_RS00895;old_locus_tag=BCEP4_100160 NZ_CAJZAV010000002.1 Protein Homology CDS 149933 151105 . - 0 ID=cds-WP_059485227.1;Parent=gene-LDO49_RS00895;Dbxref=GenBank:WP_059485227.1;Name=WP_059485227.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897725.1;locus_tag=LDO49_RS00895;product=lipopolysaccharide assembly protein LapB;protein_id=WP_059485227.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 151159 151452 . - . ID=gene-LDO49_RS00900;Name=LDO49_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00900;old_locus_tag=BCEP4_100161 NZ_CAJZAV010000002.1 Protein Homology CDS 151159 151452 . - 0 ID=cds-WP_021157458.1;Parent=gene-LDO49_RS00900;Dbxref=GenBank:WP_021157458.1;Name=WP_021157458.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195986.1;locus_tag=LDO49_RS00900;product=lipopolysaccharide assembly protein LapA domain-containing protein;protein_id=WP_021157458.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 151663 151986 . - . ID=gene-LDO49_RS00905;Name=LDO49_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00905;old_locus_tag=BCEP4_100162 NZ_CAJZAV010000002.1 Protein Homology CDS 151663 151986 . - 0 ID=cds-WP_006486894.1;Parent=gene-LDO49_RS00905;Dbxref=GenBank:WP_006486894.1;Name=WP_006486894.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486894.1;locus_tag=LDO49_RS00905;product=integration host factor subunit beta;protein_id=WP_006486894.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 152009 153721 . - . ID=gene-LDO49_RS00910;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=LDO49_RS00910;old_locus_tag=BCEP4_100163 NZ_CAJZAV010000002.1 Protein Homology CDS 152009 153721 . - 0 ID=cds-WP_011544885.1;Parent=gene-LDO49_RS00910;Dbxref=GenBank:WP_011544885.1;Name=WP_011544885.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025716.1;locus_tag=LDO49_RS00910;product=30S ribosomal protein S1;protein_id=WP_011544885.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 153864 154550 . - . ID=gene-LDO49_RS00915;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=LDO49_RS00915;old_locus_tag=BCEP4_100164 NZ_CAJZAV010000002.1 Protein Homology CDS 153864 154550 . - 0 ID=cds-WP_006476573.1;Parent=gene-LDO49_RS00915;Dbxref=GenBank:WP_006476573.1;Name=WP_006476573.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189396.1;locus_tag=LDO49_RS00915;product=(d)CMP kinase;protein_id=WP_006476573.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 154565 155869 . - . ID=gene-LDO49_RS00920;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=LDO49_RS00920;old_locus_tag=BCEP4_100165 NZ_CAJZAV010000002.1 Protein Homology CDS 154565 155869 . - 0 ID=cds-WP_048024362.1;Parent=gene-LDO49_RS00920;Dbxref=GenBank:WP_048024362.1;Name=WP_048024362.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009921655.1;locus_tag=LDO49_RS00920;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_048024362.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 155883 156809 . - . ID=gene-LDO49_RS00925;Name=LDO49_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00925;old_locus_tag=BCEP4_100166 NZ_CAJZAV010000002.1 Protein Homology CDS 155883 156809 . - 0 ID=cds-WP_059498475.1;Parent=gene-LDO49_RS00925;Dbxref=GenBank:WP_059498475.1;Name=WP_059498475.1;Ontology_term=GO:0006571,GO:0008977,GO:0033730,GO:0070403;gbkey=CDS;go_function=prephenate dehydrogenase (NAD+) activity|0008977||IEA,arogenate dehydrogenase (NADP+) activity|0033730||IEA,NAD+ binding|0070403||IEA;go_process=tyrosine biosynthetic process|0006571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486923.1;locus_tag=LDO49_RS00925;product=prephenate dehydrogenase/arogenate dehydrogenase family protein;protein_id=WP_059498475.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 156996 158078 . - . ID=gene-LDO49_RS00930;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=LDO49_RS00930;old_locus_tag=BCEP4_100167 NZ_CAJZAV010000002.1 Protein Homology CDS 156996 158078 . - 0 ID=cds-WP_060072782.1;Parent=gene-LDO49_RS00930;Dbxref=GenBank:WP_060072782.1;Name=WP_060072782.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328120.1;locus_tag=LDO49_RS00930;product=prephenate dehydratase;protein_id=WP_060072782.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 158112 159194 . - . ID=gene-LDO49_RS00935;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=LDO49_RS00935;old_locus_tag=BCEP4_100168 NZ_CAJZAV010000002.1 Protein Homology CDS 158112 159194 . - 0 ID=cds-WP_021157462.1;Parent=gene-LDO49_RS00935;Dbxref=GenBank:WP_021157462.1;Name=WP_021157462.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476577.1;locus_tag=LDO49_RS00935;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_021157462.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 159350 159949 . - . ID=gene-LDO49_RS00940;Name=LDO49_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00940;old_locus_tag=BCEP4_100169 NZ_CAJZAV010000002.1 Protein Homology CDS 159350 159949 . - 0 ID=cds-WP_021157463.1;Parent=gene-LDO49_RS00940;Dbxref=GenBank:WP_021157463.1;Name=WP_021157463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009916801.1;locus_tag=LDO49_RS00940;product=DUF2059 domain-containing protein;protein_id=WP_021157463.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 160033 162636 . - . ID=gene-LDO49_RS00945;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=LDO49_RS00945;old_locus_tag=BCEP4_100170 NZ_CAJZAV010000002.1 Protein Homology CDS 160033 162636 . - 0 ID=cds-WP_042973437.1;Parent=gene-LDO49_RS00945;Dbxref=GenBank:WP_042973437.1;Name=WP_042973437.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764872.1;locus_tag=LDO49_RS00945;product=DNA gyrase subunit A;protein_id=WP_042973437.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 163164 163832 . + . ID=gene-LDO49_RS00950;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=LDO49_RS00950;old_locus_tag=BCEP4_100172 NZ_CAJZAV010000002.1 Protein Homology CDS 163164 163832 . + 0 ID=cds-WP_021157465.1;Parent=gene-LDO49_RS00950;Dbxref=GenBank:WP_021157465.1;Name=WP_021157465.1;Ontology_term=GO:0006811,GO:0015288;gbkey=CDS;gene=ompA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351327.1;locus_tag=LDO49_RS00950;product=outer membrane protein OmpA;protein_id=WP_021157465.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 163987 164685 . + . ID=gene-LDO49_RS00955;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=LDO49_RS00955;old_locus_tag=BCEP4_100173 NZ_CAJZAV010000002.1 Protein Homology CDS 163987 164685 . + 0 ID=cds-WP_021157466.1;Parent=gene-LDO49_RS00955;Dbxref=GenBank:WP_021157466.1;Name=WP_021157466.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486844.1;locus_tag=LDO49_RS00955;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_021157466.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 164699 165415 . + . ID=gene-LDO49_RS00960;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=LDO49_RS00960;old_locus_tag=BCEP4_100174 NZ_CAJZAV010000002.1 Protein Homology CDS 164699 165415 . + 0 ID=cds-WP_048024353.1;Parent=gene-LDO49_RS00960;Dbxref=GenBank:WP_048024353.1;Name=WP_048024353.1;Note=PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (PF00702).;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351325.1;locus_tag=LDO49_RS00960;product=phosphoglycolate phosphatase;protein_id=WP_048024353.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 165433 165802 . + . ID=gene-LDO49_RS00965;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=LDO49_RS00965 NZ_CAJZAV010000002.1 cmsearch tmRNA 165433 165802 . + . ID=rna-LDO49_RS00965;Parent=gene-LDO49_RS00965;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO49_RS00965;product=transfer-messenger RNA NZ_CAJZAV010000002.1 cmsearch exon 165433 165802 . + . ID=exon-LDO49_RS00965-1;Parent=rna-LDO49_RS00965;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO49_RS00965;product=transfer-messenger RNA NZ_CAJZAV010000002.1 RefSeq gene 166072 166425 . - . ID=gene-LDO49_RS00970;Name=LDO49_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00970;old_locus_tag=BCEP4_100175 NZ_CAJZAV010000002.1 Protein Homology CDS 166072 166425 . - 0 ID=cds-WP_011351324.1;Parent=gene-LDO49_RS00970;Dbxref=GenBank:WP_011351324.1;Name=WP_011351324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897737.1;locus_tag=LDO49_RS00970;product=DUF4148 domain-containing protein;protein_id=WP_011351324.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 166803 167072 . - . ID=gene-LDO49_RS00975;Name=LDO49_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00975;old_locus_tag=BCEP4_100177 NZ_CAJZAV010000002.1 Protein Homology CDS 166803 167072 . - 0 ID=cds-WP_042973441.1;Parent=gene-LDO49_RS00975;Dbxref=GenBank:WP_042973441.1;Name=WP_042973441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756783.1;locus_tag=LDO49_RS00975;product=hypothetical protein;protein_id=WP_042973441.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 167174 168280 . - . ID=gene-LDO49_RS00980;Name=LDO49_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00980;old_locus_tag=BCEP4_100178 NZ_CAJZAV010000002.1 Protein Homology CDS 167174 168280 . - 0 ID=cds-WP_060072777.1;Parent=gene-LDO49_RS00980;Dbxref=GenBank:WP_060072777.1;Name=WP_060072777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656257.1;locus_tag=LDO49_RS00980;product=substrate-binding domain-containing protein;protein_id=WP_060072777.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 168412 168912 . + . ID=gene-LDO49_RS00985;Name=LDO49_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00985;old_locus_tag=BCEP4_100179 NZ_CAJZAV010000002.1 Protein Homology CDS 168412 168912 . + 0 ID=cds-WP_060072775.1;Parent=gene-LDO49_RS00985;Dbxref=GenBank:WP_060072775.1;Name=WP_060072775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904393.1;locus_tag=LDO49_RS00985;product=NAD(P)H-dependent oxidoreductase subunit E;protein_id=WP_060072775.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 168909 170486 . + . ID=gene-LDO49_RS00990;Name=LDO49_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS00990;old_locus_tag=BCEP4_100180 NZ_CAJZAV010000002.1 Protein Homology CDS 168909 170486 . + 0 ID=cds-WP_060051990.1;Parent=gene-LDO49_RS00990;Dbxref=GenBank:WP_060051990.1;Name=WP_060051990.1;Ontology_term=GO:0051539,GO:0009326;gbkey=CDS;go_component=formate dehydrogenase complex|0009326||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544874.1;locus_tag=LDO49_RS00990;product=formate dehydrogenase beta subunit;protein_id=WP_060051990.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 170504 173455 . + . ID=gene-LDO49_RS00995;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=LDO49_RS00995;old_locus_tag=BCEP4_100181 NZ_CAJZAV010000002.1 Protein Homology CDS 170504 173455 . + 0 ID=cds-WP_060072773.1;Parent=gene-LDO49_RS00995;Dbxref=GenBank:WP_060072773.1;Name=WP_060072773.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363333.1;locus_tag=LDO49_RS00995;product=formate dehydrogenase subunit alpha;protein_id=WP_060072773.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 173463 173714 . + . ID=gene-LDO49_RS01000;Name=LDO49_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01000;old_locus_tag=BCEP4_100182 NZ_CAJZAV010000002.1 Protein Homology CDS 173463 173714 . + 0 ID=cds-WP_021157475.1;Parent=gene-LDO49_RS01000;Dbxref=GenBank:WP_021157475.1;Name=WP_021157475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413213.1;locus_tag=LDO49_RS01000;product=formate dehydrogenase subunit delta;protein_id=WP_021157475.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 173723 175366 . - . ID=gene-LDO49_RS01005;Name=LDO49_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01005;old_locus_tag=BCEP4_100183 NZ_CAJZAV010000002.1 Protein Homology CDS 173723 175366 . - 0 ID=cds-WP_060072771.1;Parent=gene-LDO49_RS01005;Dbxref=GenBank:WP_060072771.1;Name=WP_060072771.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328117.1;locus_tag=LDO49_RS01005;product=FAD-dependent monooxygenase;protein_id=WP_060072771.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 175497 177335 . + . ID=gene-LDO49_RS01010;Name=LDO49_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01010;old_locus_tag=BCEP4_100184 NZ_CAJZAV010000002.1 Protein Homology CDS 175497 177335 . + 0 ID=cds-WP_404842347.1;Parent=gene-LDO49_RS01010;Dbxref=GenBank:WP_404842347.1;Name=WP_404842347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722667.1;locus_tag=LDO49_RS01010;product=tetratricopeptide repeat protein;protein_id=WP_404842347.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 177427 178722 . - . ID=gene-LDO49_RS01015;Name=LDO49_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01015;old_locus_tag=BCEP4_100185 NZ_CAJZAV010000002.1 Protein Homology CDS 177427 178722 . - 0 ID=cds-WP_042973445.1;Parent=gene-LDO49_RS01015;Dbxref=GenBank:WP_042973445.1;Name=WP_042973445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694210.1;locus_tag=LDO49_RS01015;product=MFS transporter;protein_id=WP_042973445.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 178721 178975 . + . ID=gene-LDO49_RS01020;Name=LDO49_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01020 NZ_CAJZAV010000002.1 GeneMarkS-2+ CDS 178721 178975 . + 0 ID=cds-WP_059619188.1;Parent=gene-LDO49_RS01020;Dbxref=GenBank:WP_059619188.1;Name=WP_059619188.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS01020;product=hypothetical protein;protein_id=WP_059619188.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 179081 180019 . + . ID=gene-LDO49_RS01025;Name=LDO49_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01025;old_locus_tag=BCEP4_100186 NZ_CAJZAV010000002.1 Protein Homology CDS 179081 180019 . + 0 ID=cds-WP_060072770.1;Parent=gene-LDO49_RS01025;Dbxref=GenBank:WP_060072770.1;Name=WP_060072770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351314.1;locus_tag=LDO49_RS01025;product=hypothetical protein;protein_id=WP_060072770.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 180098 180790 . - . ID=gene-LDO49_RS01030;Name=LDO49_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01030;old_locus_tag=BCEP4_100187 NZ_CAJZAV010000002.1 Protein Homology CDS 180098 180790 . - 0 ID=cds-WP_059498458.1;Parent=gene-LDO49_RS01030;Dbxref=GenBank:WP_059498458.1;Name=WP_059498458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485520.1;locus_tag=LDO49_RS01030;product=DUF2968 domain-containing protein;protein_id=WP_059498458.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 180906 182093 . - . ID=gene-LDO49_RS01035;Name=LDO49_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01035;old_locus_tag=BCEP4_100189 NZ_CAJZAV010000002.1 Protein Homology CDS 180906 182093 . - 0 ID=cds-WP_059678019.1;Parent=gene-LDO49_RS01035;Dbxref=GenBank:WP_059678019.1;Name=WP_059678019.1;Ontology_term=GO:0016787,GO:0016811;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544866.1;locus_tag=LDO49_RS01035;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_059678019.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 182373 183053 . + . ID=gene-LDO49_RS01040;Name=LDO49_RS01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01040;old_locus_tag=BCEP4_100188 NZ_CAJZAV010000002.1 Protein Homology CDS 182373 183053 . + 0 ID=cds-WP_048024337.1;Parent=gene-LDO49_RS01040;Dbxref=GenBank:WP_048024337.1;Name=WP_048024337.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491806.1;locus_tag=LDO49_RS01040;product=GntR family transcriptional regulator;protein_id=WP_048024337.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 183060 184436 . + . ID=gene-LDO49_RS01045;Name=LDO49_RS01045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01045;old_locus_tag=BCEP4_100190 NZ_CAJZAV010000002.1 Protein Homology CDS 183060 184436 . + 0 ID=cds-WP_060072768.1;Parent=gene-LDO49_RS01045;Dbxref=GenBank:WP_060072768.1;Name=WP_060072768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756770.1;locus_tag=LDO49_RS01045;product=amidase;protein_id=WP_060072768.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 184576 185088 . + . ID=gene-LDO49_RS01050;Name=LDO49_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01050;old_locus_tag=BCEP4_100191 NZ_CAJZAV010000002.1 Protein Homology CDS 184576 185088 . + 0 ID=cds-WP_224051297.1;Parent=gene-LDO49_RS01050;Dbxref=GenBank:WP_224051297.1;Name=WP_224051297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756769.1;locus_tag=LDO49_RS01050;product=disulfide bond formation protein B;protein_id=WP_224051297.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 185730 186734 . + . ID=gene-LDO49_RS01055;Name=xdhC;gbkey=Gene;gene=xdhC;gene_biotype=protein_coding;locus_tag=LDO49_RS01055;old_locus_tag=BCEP4_100192 NZ_CAJZAV010000002.1 Protein Homology CDS 185730 186734 . + 0 ID=cds-WP_060072766.1;Parent=gene-LDO49_RS01055;Dbxref=GenBank:WP_060072766.1;Name=WP_060072766.1;Ontology_term=GO:0009115,GO:0065003,GO:0043546;gbkey=CDS;gene=xdhC;go_function=molybdopterin cofactor binding|0043546||IEA;go_process=xanthine catabolic process|0009115||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756768.1;locus_tag=LDO49_RS01055;product=xanthine dehydrogenase accessory protein XdhC;protein_id=WP_060072766.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 186753 187778 . + . ID=gene-LDO49_RS01060;Name=LDO49_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01060;old_locus_tag=BCEP4_100193 NZ_CAJZAV010000002.1 Protein Homology CDS 186753 187778 . + 0 ID=cds-WP_060072764.1;Parent=gene-LDO49_RS01060;Dbxref=GenBank:WP_060072764.1;Name=WP_060072764.1;Ontology_term=GO:0006146,GO:0000034;gbkey=CDS;go_function=adenine deaminase activity|0000034||IEA;go_process=adenine catabolic process|0006146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189005.1;locus_tag=LDO49_RS01060;product=adenosine deaminase;protein_id=WP_060072764.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 187806 188153 . + . ID=gene-LDO49_RS01065;Name=LDO49_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01065 NZ_CAJZAV010000002.1 Protein Homology CDS 187806 188153 . + 0 ID=cds-WP_224051299.1;Parent=gene-LDO49_RS01065;Dbxref=GenBank:WP_224051299.1;Name=WP_224051299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544861.1;locus_tag=LDO49_RS01065;product=hypothetical protein;protein_id=WP_224051299.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 188150 189466 . + . ID=gene-LDO49_RS01070;Name=guaD;gbkey=Gene;gene=guaD;gene_biotype=protein_coding;locus_tag=LDO49_RS01070;old_locus_tag=BCEP4_100194 NZ_CAJZAV010000002.1 Protein Homology CDS 188150 189466 . + 0 ID=cds-WP_059485243.1;Parent=gene-LDO49_RS01070;Dbxref=GenBank:WP_059485243.1;Name=WP_059485243.1;Ontology_term=GO:0006147,GO:0008270,GO:0008892;gbkey=CDS;gene=guaD;go_function=zinc ion binding|0008270||IEA,guanine deaminase activity|0008892||IEA;go_process=guanine catabolic process|0006147||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363320.1;locus_tag=LDO49_RS01070;product=guanine deaminase;protein_id=WP_059485243.1;transl_table=11 NZ_CAJZAV010000002.1 cmsearch riboswitch 189616 189753 . + . ID=id-NZ_CAJZAV010000002.1:189616..189753;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAV010000002.1 RefSeq gene 189832 190404 . + . ID=gene-LDO49_RS01075;Name=LDO49_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01075;old_locus_tag=BCEP4_100195 NZ_CAJZAV010000002.1 Protein Homology CDS 189832 190404 . + 0 ID=cds-WP_048024328.1;Parent=gene-LDO49_RS01075;Dbxref=GenBank:WP_048024328.1;Name=WP_048024328.1;Ontology_term=GO:0030001,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496563.1;locus_tag=LDO49_RS01075;product=TMEM165/GDT1 family protein;protein_id=WP_048024328.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 190459 191160 . - . ID=gene-LDO49_RS01080;Name=LDO49_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01080;old_locus_tag=BCEP4_100196 NZ_CAJZAV010000002.1 Protein Homology CDS 190459 191160 . - 0 ID=cds-WP_048024326.1;Parent=gene-LDO49_RS01080;Dbxref=GenBank:WP_048024326.1;Name=WP_048024326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753214.1;locus_tag=LDO49_RS01080;product=DUF4136 domain-containing protein;protein_id=WP_048024326.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 191348 194041 . + . ID=gene-LDO49_RS01085;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=LDO49_RS01085;old_locus_tag=BCEP4_100197 NZ_CAJZAV010000002.1 Protein Homology CDS 191348 194041 . + 0 ID=cds-WP_060072762.1;Parent=gene-LDO49_RS01085;Dbxref=GenBank:WP_060072762.1;Name=WP_060072762.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532498.1;locus_tag=LDO49_RS01085;product=aminopeptidase N;protein_id=WP_060072762.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 194321 195334 . + . ID=gene-LDO49_RS01090;Name=LDO49_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01090;old_locus_tag=BCEP4_100198 NZ_CAJZAV010000002.1 Protein Homology CDS 194321 195334 . + 0 ID=cds-WP_006485729.1;Parent=gene-LDO49_RS01090;Dbxref=GenBank:WP_006485729.1;Name=WP_006485729.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400763.1;locus_tag=LDO49_RS01090;product=class 1 fructose-bisphosphatase;protein_id=WP_006485729.1;transl_table=11 NZ_CAJZAV010000002.1 RefSeq gene 195540 195615 . + . ID=gene-LDO49_RS01095;Name=LDO49_RS01095;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS01095;old_locus_tag=BCEP4_TRNA8 NZ_CAJZAV010000002.1 tRNAscan-SE tRNA 195540 195615 . + . ID=rna-LDO49_RS01095;Parent=gene-LDO49_RS01095;anticodon=(pos:195573..195575);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS01095;product=tRNA-Thr NZ_CAJZAV010000002.1 tRNAscan-SE exon 195540 195615 . + . ID=exon-LDO49_RS01095-1;Parent=rna-LDO49_RS01095;anticodon=(pos:195573..195575);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS01095;product=tRNA-Thr ##sequence-region NZ_CAJZAV010000003.1 1 25900 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000003.1 RefSeq region 1 25900 . + . ID=NZ_CAJZAV010000003.1:1..25900;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_100 NZ_CAJZAV010000003.1 RefSeq gene 1 3004 . - . ID=gene-LDO49_RS01100;Name=LDO49_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01100;partial=true;start_range=.,1 NZ_CAJZAV010000003.1 Protein Homology CDS 1 3004 . - 0 ID=cds-WP_224051302.1;Parent=gene-LDO49_RS01100;Dbxref=GenBank:WP_224051302.1;Name=WP_224051302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004542275.1;locus_tag=LDO49_RS01100;partial=true;product=multidrug efflux RND transporter permease subunit;protein_id=WP_224051302.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000003.1 RefSeq gene 3025 4224 . - . ID=gene-LDO49_RS01105;Name=LDO49_RS01105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01105;old_locus_tag=BCEP4_1000002 NZ_CAJZAV010000003.1 Protein Homology CDS 3025 4224 . - 0 ID=cds-WP_059623494.1;Parent=gene-LDO49_RS01105;Dbxref=GenBank:WP_059623494.1;Name=WP_059623494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487246.1;locus_tag=LDO49_RS01105;product=MexX/AxyX family multidrug efflux RND transporter periplasmic adaptor subunit;protein_id=WP_059623494.1;transl_table=11 NZ_CAJZAV010000003.1 RefSeq gene 4375 5022 . + . ID=gene-LDO49_RS01110;Name=LDO49_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01110;old_locus_tag=BCEP4_1000003 NZ_CAJZAV010000003.1 Protein Homology CDS 4375 5022 . + 0 ID=cds-WP_021163589.1;Parent=gene-LDO49_RS01110;Dbxref=GenBank:WP_021163589.1;Name=WP_021163589.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694295.1;locus_tag=LDO49_RS01110;product=TetR family transcriptional regulator;protein_id=WP_021163589.1;transl_table=11 NZ_CAJZAV010000003.1 RefSeq gene 5364 6635 . + . ID=gene-LDO49_RS01115;Name=LDO49_RS01115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01115;old_locus_tag=BCEP4_1000005 NZ_CAJZAV010000003.1 Protein Homology CDS 5364 6635 . + 0 ID=cds-WP_059588203.1;Parent=gene-LDO49_RS01115;Dbxref=GenBank:WP_059588203.1;Name=WP_059588203.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006499095.1;locus_tag=LDO49_RS01115;product=M23 family metallopeptidase;protein_id=WP_059588203.1;transl_table=11 NZ_CAJZAV010000003.1 RefSeq gene 6783 7508 . - . ID=gene-LDO49_RS01120;Name=LDO49_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01120;old_locus_tag=BCEP4_1000006 NZ_CAJZAV010000003.1 Protein Homology CDS 6783 7508 . - 0 ID=cds-WP_060069900.1;Parent=gene-LDO49_RS01120;Dbxref=GenBank:WP_060069900.1;Name=WP_060069900.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545358.1;locus_tag=LDO49_RS01120;product=amino acid ABC transporter permease;protein_id=WP_060069900.1;transl_table=11 NZ_CAJZAV010000003.1 RefSeq gene 7511 8233 . - . ID=gene-LDO49_RS01125;Name=LDO49_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01125;old_locus_tag=BCEP4_1000007 NZ_CAJZAV010000003.1 Protein Homology CDS 7511 8233 . - 0 ID=cds-WP_059817131.1;Parent=gene-LDO49_RS01125;Dbxref=GenBank:WP_059817131.1;Name=WP_059817131.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351917.1;locus_tag=LDO49_RS01125;product=amino acid ABC transporter permease;protein_id=WP_059817131.1;transl_table=11 NZ_CAJZAV010000003.1 RefSeq gene 8328 9143 . - . ID=gene-LDO49_RS01130;Name=LDO49_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01130;old_locus_tag=BCEP4_1000008 NZ_CAJZAV010000003.1 Protein Homology CDS 8328 9143 . - 0 ID=cds-WP_042977678.1;Parent=gene-LDO49_RS01130;Dbxref=GenBank:WP_042977678.1;Name=WP_042977678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483955.1;locus_tag=LDO49_RS01130;product=ABC transporter substrate-binding protein;protein_id=WP_042977678.1;transl_table=11 NZ_CAJZAV010000003.1 RefSeq gene 9471 10982 . - . ID=gene-LDO49_RS01135;Name=LDO49_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01135;old_locus_tag=BCEP4_1000009 NZ_CAJZAV010000003.1 Protein Homology CDS 9471 10982 . - 0 ID=cds-WP_224051304.1;Parent=gene-LDO49_RS01135;Dbxref=GenBank:WP_224051304.1;Name=WP_224051304.1;Ontology_term=GO:0009446,GO:0004668;gbkey=CDS;go_function=protein-arginine deiminase activity|0004668||IEA;go_process=putrescine biosynthetic process|0009446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332332.1;locus_tag=LDO49_RS01135;product=agmatine deiminase family protein;protein_id=WP_224051304.1;transl_table=11 NZ_CAJZAV010000003.1 RefSeq gene 11134 12246 . - . ID=gene-LDO49_RS01140;Name=LDO49_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01140;old_locus_tag=BCEP4_1000010 NZ_CAJZAV010000003.1 Protein Homology CDS 11134 12246 . - 0 ID=cds-WP_059588200.1;Parent=gene-LDO49_RS01140;Dbxref=GenBank:WP_059588200.1;Name=WP_059588200.1;Ontology_term=GO:0009446,GO:0004668;gbkey=CDS;go_function=protein-arginine deiminase activity|0004668||IEA;go_process=putrescine biosynthetic process|0009446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897093.1;locus_tag=LDO49_RS01140;product=agmatine deiminase family protein;protein_id=WP_059588200.1;transl_table=11 NZ_CAJZAV010000003.1 RefSeq gene 12297 13409 . - . ID=gene-LDO49_RS01145;Name=LDO49_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01145;old_locus_tag=BCEP4_1000011 NZ_CAJZAV010000003.1 Protein Homology CDS 12297 13409 . - 0 ID=cds-WP_224051305.1;Parent=gene-LDO49_RS01145;Dbxref=GenBank:WP_224051305.1;Name=WP_224051305.1;Ontology_term=GO:0015846,GO:0019808,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897094.1;locus_tag=LDO49_RS01145;product=polyamine ABC transporter substrate-binding protein;protein_id=WP_224051305.1;transl_table=11 NZ_CAJZAV010000003.1 RefSeq gene 13420 14334 . - . ID=gene-LDO49_RS01150;Name=aguB;gbkey=Gene;gene=aguB;gene_biotype=protein_coding;locus_tag=LDO49_RS01150;old_locus_tag=BCEP4_1000012 NZ_CAJZAV010000003.1 Protein Homology CDS 13420 14334 . - 0 ID=cds-WP_021163174.1;Parent=gene-LDO49_RS01150;Dbxref=GenBank:WP_021163174.1;Name=WP_021163174.1;Ontology_term=GO:0009446,GO:0050126,GO:0005737;gbkey=CDS;gene=aguB;go_component=cytoplasm|0005737||IEA;go_function=N-carbamoylputrescine amidase activity|0050126||IEA;go_process=putrescine biosynthetic process|0009446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351911.1;locus_tag=LDO49_RS01150;product=N-carbamoylputrescine amidase;protein_id=WP_021163174.1;transl_table=11 NZ_CAJZAV010000003.1 RefSeq gene 14381 15418 . - . ID=gene-LDO49_RS01155;Name=LDO49_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01155;old_locus_tag=BCEP4_1000013 NZ_CAJZAV010000003.1 Protein Homology CDS 14381 15418 . - 0 ID=cds-WP_224051306.1;Parent=gene-LDO49_RS01155;Dbxref=GenBank:WP_224051306.1;Name=WP_224051306.1;Ontology_term=GO:0009446,GO:0004668;gbkey=CDS;go_function=protein-arginine deiminase activity|0004668||IEA;go_process=putrescine biosynthetic process|0009446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351910.1;locus_tag=LDO49_RS01155;product=agmatine deiminase family protein;protein_id=WP_224051306.1;transl_table=11 NZ_CAJZAV010000003.1 RefSeq gene 15520 16449 . + . ID=gene-LDO49_RS01160;Name=LDO49_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01160;old_locus_tag=BCEP4_1000014 NZ_CAJZAV010000003.1 Protein Homology CDS 15520 16449 . + 0 ID=cds-WP_059710188.1;Parent=gene-LDO49_RS01160;Dbxref=GenBank:WP_059710188.1;Name=WP_059710188.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351909.1;locus_tag=LDO49_RS01160;product=LysR family transcriptional regulator;protein_id=WP_059710188.1;transl_table=11 NZ_CAJZAV010000003.1 RefSeq gene 16526 17830 . - . ID=gene-LDO49_RS01165;Name=LDO49_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01165;old_locus_tag=BCEP4_1000015 NZ_CAJZAV010000003.1 Protein Homology CDS 16526 17830 . - 0 ID=cds-WP_224051307.1;Parent=gene-LDO49_RS01165;Dbxref=GenBank:WP_224051307.1;Name=WP_224051307.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754308.1;locus_tag=LDO49_RS01165;product=MFS family transporter;protein_id=WP_224051307.1;transl_table=11 NZ_CAJZAV010000003.1 RefSeq gene 18062 19741 . - . ID=gene-LDO49_RS01170;Name=LDO49_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01170;old_locus_tag=BCEP4_1000016 NZ_CAJZAV010000003.1 Protein Homology CDS 18062 19741 . - 0 ID=cds-WP_048020644.1;Parent=gene-LDO49_RS01170;Dbxref=GenBank:WP_048020644.1;Name=WP_048020644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694280.1;locus_tag=LDO49_RS01170;product=SpoVR family protein;protein_id=WP_048020644.1;transl_table=11 NZ_CAJZAV010000003.1 RefSeq gene 19738 21006 . - . ID=gene-LDO49_RS01175;Name=LDO49_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01175;old_locus_tag=BCEP4_1000017 NZ_CAJZAV010000003.1 Protein Homology CDS 19738 21006 . - 0 ID=cds-WP_048020646.1;Parent=gene-LDO49_RS01175;Dbxref=GenBank:WP_048020646.1;Name=WP_048020646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332328.1;locus_tag=LDO49_RS01175;product=YeaH/YhbH family protein;protein_id=WP_048020646.1;transl_table=11 NZ_CAJZAV010000003.1 RefSeq gene 21132 23054 . - . ID=gene-LDO49_RS01180;Name=LDO49_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01180;old_locus_tag=BCEP4_1000018 NZ_CAJZAV010000003.1 Protein Homology CDS 21132 23054 . - 0 ID=cds-WP_021163181.1;Parent=gene-LDO49_RS01180;Dbxref=GenBank:WP_021163181.1;Name=WP_021163181.1;Ontology_term=GO:0004672;gbkey=CDS;go_function=protein kinase activity|0004672||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020165153.1;locus_tag=LDO49_RS01180;product=PrkA family serine protein kinase;protein_id=WP_021163181.1;transl_table=11 NZ_CAJZAV010000003.1 RefSeq gene 23617 25392 . - . ID=gene-LDO49_RS01185;Name=LDO49_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01185;old_locus_tag=BCEP4_1000019 NZ_CAJZAV010000003.1 Protein Homology CDS 23617 25392 . - 0 ID=cds-WP_124624300.1;Parent=gene-LDO49_RS01185;Dbxref=GenBank:WP_124624300.1;Name=WP_124624300.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328438.1;locus_tag=LDO49_RS01185;product=methyl-accepting chemotaxis protein;protein_id=WP_124624300.1;transl_table=11 NZ_CAJZAV010000003.1 RefSeq gene 25681 25900 . - . ID=gene-LDO49_RS01190;Name=LDO49_RS01190;end_range=25900,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01190;old_locus_tag=BCEP4_1000020;partial=true NZ_CAJZAV010000003.1 Protein Homology CDS 25681 25900 . - 1 ID=cds-WP_224051308.1;Parent=gene-LDO49_RS01190;Dbxref=GenBank:WP_224051308.1;Name=WP_224051308.1;end_range=25900,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332403.1;locus_tag=LDO49_RS01190;partial=true;product=PfkB family carbohydrate kinase;protein_id=WP_224051308.1;transl_table=11 ##sequence-region NZ_CAJZAV010000004.1 1 3448 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000004.1 RefSeq region 1 3448 . + . ID=NZ_CAJZAV010000004.1:1..3448;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_101 NZ_CAJZAV010000004.1 RefSeq gene 1 1272 . + . ID=gene-LDO49_RS01195;Name=LDO49_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01195;old_locus_tag=BCEP4_1010001;partial=true;start_range=.,1 NZ_CAJZAV010000004.1 Protein Homology CDS 1 1272 . + 0 ID=cds-WP_224051309.1;Parent=gene-LDO49_RS01195;Dbxref=GenBank:WP_224051309.1;Name=WP_224051309.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212512.1;locus_tag=LDO49_RS01195;partial=true;product=chemotaxis protein CheW;protein_id=WP_224051309.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000004.1 RefSeq gene 1324 1839 . + . ID=gene-LDO49_RS01200;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=LDO49_RS01200;old_locus_tag=BCEP4_1010002 NZ_CAJZAV010000004.1 Protein Homology CDS 1324 1839 . + 0 ID=cds-WP_021164320.1;Parent=gene-LDO49_RS01200;Dbxref=GenBank:WP_021164320.1;Name=WP_021164320.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486165.1;locus_tag=LDO49_RS01200;product=chemotaxis protein CheW;protein_id=WP_021164320.1;transl_table=11 NZ_CAJZAV010000004.1 RefSeq gene 1877 3448 . + . ID=gene-LDO49_RS01205;Name=LDO49_RS01205;end_range=3448,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01205;partial=true NZ_CAJZAV010000004.1 Protein Homology CDS 1877 3448 . + 0 ID=cds-WP_224051310.1;Parent=gene-LDO49_RS01205;Dbxref=GenBank:WP_224051310.1;Name=WP_224051310.1;Ontology_term=GO:0007165,GO:0016020;end_range=3448,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212513.1;locus_tag=LDO49_RS01205;partial=true;product=methyl-accepting chemotaxis protein;protein_id=WP_224051310.1;transl_table=11 ##sequence-region NZ_CAJZAV010000005.1 1 50304 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000005.1 RefSeq region 1 50304 . + . ID=NZ_CAJZAV010000005.1:1..50304;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_102 NZ_CAJZAV010000005.1 RefSeq gene 1 184 . - . ID=gene-LDO49_RS37720;Name=LDO49_RS37720;end_range=184,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37720;partial=true;start_range=.,1 NZ_CAJZAV010000005.1 GeneMarkS-2+ CDS 1 184 . - 0 ID=cds-WP_443797890.1;Parent=gene-LDO49_RS37720;Dbxref=GenBank:WP_443797890.1;Name=WP_443797890.1;end_range=184,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37720;partial=true;product=hypothetical protein;protein_id=WP_443797890.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 195 1491 . - . ID=gene-LDO49_RS01210;Name=LDO49_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01210;old_locus_tag=BCEP4_1020001;partial=true;start_range=.,195 NZ_CAJZAV010000005.1 Protein Homology CDS 195 1491 . - 0 ID=cds-WP_443797891.1;Parent=gene-LDO49_RS01210;Dbxref=GenBank:WP_443797891.1;Name=WP_443797891.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898522.1;locus_tag=LDO49_RS01210;partial=true;product=efflux transporter outer membrane subunit;protein_id=WP_443797891.1;start_range=.,195;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 1500 2450 . - . ID=gene-LDO49_RS01215;Name=LDO49_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01215;old_locus_tag=BCEP4_1020002 NZ_CAJZAV010000005.1 Protein Homology CDS 1500 2450 . - 0 ID=cds-WP_224051311.1;Parent=gene-LDO49_RS01215;Dbxref=GenBank:WP_224051311.1;Name=WP_224051311.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733406.1;locus_tag=LDO49_RS01215;product=glycosyltransferase family 2 protein;protein_id=WP_224051311.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 2461 4062 . - . ID=gene-LDO49_RS01220;Name=LDO49_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01220;old_locus_tag=BCEP4_1020003 NZ_CAJZAV010000005.1 Protein Homology CDS 2461 4062 . - 0 ID=cds-WP_059589789.1;Parent=gene-LDO49_RS01220;Dbxref=GenBank:WP_059589789.1;Name=WP_059589789.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898520.1;locus_tag=LDO49_RS01220;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_059589789.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 4059 5342 . - . ID=gene-LDO49_RS01225;Name=LDO49_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01225;old_locus_tag=BCEP4_1020004 NZ_CAJZAV010000005.1 Protein Homology CDS 4059 5342 . - 0 ID=cds-WP_224051312.1;Parent=gene-LDO49_RS01225;Dbxref=GenBank:WP_224051312.1;Name=WP_224051312.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498733.1;locus_tag=LDO49_RS01225;product=glycosyltransferase;protein_id=WP_224051312.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 5360 5929 . - . ID=gene-LDO49_RS01230;Name=LDO49_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01230;old_locus_tag=BCEP4_1020005 NZ_CAJZAV010000005.1 Protein Homology CDS 5360 5929 . - 0 ID=cds-WP_021160336.1;Parent=gene-LDO49_RS01230;Dbxref=GenBank:WP_021160336.1;Name=WP_021160336.1;Ontology_term=GO:0032259,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898518.1;locus_tag=LDO49_RS01230;product=methyltransferase family protein;protein_id=WP_021160336.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 5997 6899 . - . ID=gene-LDO49_RS01235;Name=LDO49_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01235;old_locus_tag=BCEP4_1020006 NZ_CAJZAV010000005.1 Protein Homology CDS 5997 6899 . - 0 ID=cds-WP_042975590.1;Parent=gene-LDO49_RS01235;Dbxref=GenBank:WP_042975590.1;Name=WP_042975590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547083.1;locus_tag=LDO49_RS01235;product=alpha/beta fold hydrolase;protein_id=WP_042975590.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 7619 8203 . + . ID=gene-LDO49_RS01240;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=LDO49_RS01240;old_locus_tag=BCEP4_1020008 NZ_CAJZAV010000005.1 Protein Homology CDS 7619 8203 . + 0 ID=cds-WP_021160333.1;Parent=gene-LDO49_RS01240;Dbxref=GenBank:WP_021160333.1;Name=WP_021160333.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331398.1;locus_tag=LDO49_RS01240;product=transcriptional regulator BetI;protein_id=WP_021160333.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 8236 9705 . + . ID=gene-LDO49_RS01245;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=LDO49_RS01245;old_locus_tag=BCEP4_1020009 NZ_CAJZAV010000005.1 Protein Homology CDS 8236 9705 . + 0 ID=cds-WP_021160332.1;Parent=gene-LDO49_RS01245;Dbxref=GenBank:WP_021160332.1;Name=WP_021160332.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533333.1;locus_tag=LDO49_RS01245;product=betaine-aldehyde dehydrogenase;protein_id=WP_021160332.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 9731 11431 . + . ID=gene-LDO49_RS01250;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=LDO49_RS01250;old_locus_tag=BCEP4_1020010 NZ_CAJZAV010000005.1 Protein Homology CDS 9731 11431 . + 0 ID=cds-WP_060072063.1;Parent=gene-LDO49_RS01250;Dbxref=GenBank:WP_060072063.1;Name=WP_060072063.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406015.1;locus_tag=LDO49_RS01250;product=choline dehydrogenase;protein_id=WP_060072063.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 11650 12729 . - . ID=gene-LDO49_RS01255;Name=LDO49_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01255;old_locus_tag=BCEP4_1020011 NZ_CAJZAV010000005.1 GeneMarkS-2+ CDS 11650 12729 . - 0 ID=cds-WP_060072065.1;Parent=gene-LDO49_RS01255;Dbxref=GenBank:WP_060072065.1;Name=WP_060072065.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS01255;product=hypothetical protein;protein_id=WP_060072065.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 12726 15452 . - . ID=gene-LDO49_RS01260;Name=LDO49_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01260;old_locus_tag=BCEP4_1020012 NZ_CAJZAV010000005.1 Protein Homology CDS 12726 15452 . - 0 ID=cds-WP_124475089.1;Parent=gene-LDO49_RS01260;Dbxref=GenBank:WP_124475089.1;Name=WP_124475089.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042700.4;locus_tag=LDO49_RS01260;product=toxin VasX;protein_id=WP_124475089.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 15463 16389 . - . ID=gene-LDO49_RS01265;Name=LDO49_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01265;old_locus_tag=BCEP4_1020013 NZ_CAJZAV010000005.1 GeneMarkS-2+ CDS 15463 16389 . - 0 ID=cds-WP_124475088.1;Parent=gene-LDO49_RS01265;Dbxref=GenBank:WP_124475088.1;Name=WP_124475088.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS01265;product=hypothetical protein;protein_id=WP_124475088.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 16809 17612 . - . ID=gene-LDO49_RS01270;Name=LDO49_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01270;old_locus_tag=BCEP4_1020015 NZ_CAJZAV010000005.1 Protein Homology CDS 16809 17612 . - 0 ID=cds-WP_224051314.1;Parent=gene-LDO49_RS01270;Dbxref=GenBank:WP_224051314.1;Name=WP_224051314.1;Ontology_term=GO:0016310,GO:0004674,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008119538.1;locus_tag=LDO49_RS01270;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_224051314.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 17573 18034 . - . ID=gene-LDO49_RS01275;Name=LDO49_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01275;old_locus_tag=BCEP4_1020016 NZ_CAJZAV010000005.1 Protein Homology CDS 17573 18034 . - 0 ID=cds-WP_224051313.1;Parent=gene-LDO49_RS01275;Dbxref=GenBank:WP_224051313.1;Name=WP_224051313.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025041.6;locus_tag=LDO49_RS01275;product=HipA N-terminal domain-containing protein;protein_id=WP_224051313.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 18088 18405 . - . ID=gene-LDO49_RS01280;Name=LDO49_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01280;old_locus_tag=BCEP4_1020017 NZ_CAJZAV010000005.1 Protein Homology CDS 18088 18405 . - 0 ID=cds-WP_059589782.1;Parent=gene-LDO49_RS01280;Dbxref=GenBank:WP_059589782.1;Name=WP_059589782.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006465556.1;locus_tag=LDO49_RS01280;product=helix-turn-helix domain-containing protein;protein_id=WP_059589782.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 18820 19410 . - . ID=gene-LDO49_RS01285;Name=LDO49_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01285;old_locus_tag=BCEP4_1020019 NZ_CAJZAV010000005.1 Protein Homology CDS 18820 19410 . - 0 ID=cds-WP_060072071.1;Parent=gene-LDO49_RS01285;Dbxref=GenBank:WP_060072071.1;Name=WP_060072071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354161.1;locus_tag=LDO49_RS01285;product=dual specificity protein phosphatase family protein;protein_id=WP_060072071.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 19424 19918 . - . ID=gene-LDO49_RS01290;Name=LDO49_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01290;old_locus_tag=BCEP4_1020020 NZ_CAJZAV010000005.1 Protein Homology CDS 19424 19918 . - 0 ID=cds-WP_059589780.1;Parent=gene-LDO49_RS01290;Dbxref=GenBank:WP_059589780.1;Name=WP_059589780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354160.1;locus_tag=LDO49_RS01290;product=hypothetical protein;protein_id=WP_059589780.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 19915 21057 . - . ID=gene-LDO49_RS01295;Name=LDO49_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01295;old_locus_tag=BCEP4_1020021 NZ_CAJZAV010000005.1 Protein Homology CDS 19915 21057 . - 0 ID=cds-WP_059494935.1;Parent=gene-LDO49_RS01295;Dbxref=GenBank:WP_059494935.1;Name=WP_059494935.1;Ontology_term=GO:0009247,GO:0016758;gbkey=CDS;go_function=hexosyltransferase activity|0016758||IEA;go_process=glycolipid biosynthetic process|0009247||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089383.1;locus_tag=LDO49_RS01295;product=MGDG synthase family glycosyltransferase;protein_id=WP_059494935.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 21477 22568 . - . ID=gene-LDO49_RS01300;Name=LDO49_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01300;old_locus_tag=BCEP4_1020023 NZ_CAJZAV010000005.1 Protein Homology CDS 21477 22568 . - 0 ID=cds-WP_060072073.1;Parent=gene-LDO49_RS01300;Dbxref=GenBank:WP_060072073.1;Name=WP_060072073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354158.1;locus_tag=LDO49_RS01300;product=hypothetical protein;protein_id=WP_060072073.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 22803 23309 . - . ID=gene-LDO49_RS01305;Name=LDO49_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01305;old_locus_tag=BCEP4_1020025 NZ_CAJZAV010000005.1 Protein Homology CDS 22803 23309 . - 0 ID=cds-WP_060072075.1;Parent=gene-LDO49_RS01305;Dbxref=GenBank:WP_060072075.1;Name=WP_060072075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752709.1;locus_tag=LDO49_RS01305;product=hypothetical protein;protein_id=WP_060072075.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 23490 23993 . - . ID=gene-LDO49_RS01310;Name=LDO49_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01310;old_locus_tag=BCEP4_1020026 NZ_CAJZAV010000005.1 Protein Homology CDS 23490 23993 . - 0 ID=cds-WP_060072077.1;Parent=gene-LDO49_RS01310;Dbxref=GenBank:WP_060072077.1;Name=WP_060072077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904186.1;locus_tag=LDO49_RS01310;product=hypothetical protein;protein_id=WP_060072077.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 24115 24939 . - . ID=gene-LDO49_RS01315;Name=LDO49_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01315;old_locus_tag=BCEP4_1020027 NZ_CAJZAV010000005.1 Protein Homology CDS 24115 24939 . - 0 ID=cds-WP_048026405.1;Parent=gene-LDO49_RS01315;Dbxref=GenBank:WP_048026405.1;Name=WP_048026405.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898511.1;locus_tag=LDO49_RS01315;product=OmpW/AlkL family protein;protein_id=WP_048026405.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 25014 26267 . - . ID=gene-LDO49_RS01320;Name=LDO49_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01320;old_locus_tag=BCEP4_1020028 NZ_CAJZAV010000005.1 Protein Homology CDS 25014 26267 . - 0 ID=cds-WP_059589774.1;Parent=gene-LDO49_RS01320;Dbxref=GenBank:WP_059589774.1;Name=WP_059589774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898510.1;locus_tag=LDO49_RS01320;product=DUF2957 domain-containing protein;protein_id=WP_059589774.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 26339 27934 . - . ID=gene-LDO49_RS01325;Name=LDO49_RS01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01325;old_locus_tag=BCEP4_1020029 NZ_CAJZAV010000005.1 Protein Homology CDS 26339 27934 . - 0 ID=cds-WP_059589851.1;Parent=gene-LDO49_RS01325;Dbxref=GenBank:WP_059589851.1;Name=WP_059589851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498727.1;locus_tag=LDO49_RS01325;product=DUF2957 domain-containing protein;protein_id=WP_059589851.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 28552 28848 . - . ID=gene-LDO49_RS01330;Name=LDO49_RS01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01330;old_locus_tag=BCEP4_1020031 NZ_CAJZAV010000005.1 Protein Homology CDS 28552 28848 . - 0 ID=cds-WP_021160319.1;Parent=gene-LDO49_RS01330;Dbxref=GenBank:WP_021160319.1;Name=WP_021160319.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354152.1;locus_tag=LDO49_RS01330;product=cupin domain-containing protein;protein_id=WP_021160319.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 29284 30231 . + . ID=gene-LDO49_RS01335;Name=LDO49_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01335;old_locus_tag=BCEP4_1020033 NZ_CAJZAV010000005.1 Protein Homology CDS 29284 30231 . + 0 ID=cds-WP_021160317.1;Parent=gene-LDO49_RS01335;Dbxref=GenBank:WP_021160317.1;Name=WP_021160317.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758876.1;locus_tag=LDO49_RS01335;product=ABC transporter ATP-binding protein;protein_id=WP_021160317.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 30235 30996 . + . ID=gene-LDO49_RS01340;Name=LDO49_RS01340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01340;old_locus_tag=BCEP4_1020034 NZ_CAJZAV010000005.1 Protein Homology CDS 30235 30996 . + 0 ID=cds-WP_021160316.1;Parent=gene-LDO49_RS01340;Dbxref=GenBank:WP_021160316.1;Name=WP_021160316.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547075.1;locus_tag=LDO49_RS01340;product=ABC transporter permease;protein_id=WP_021160316.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 31157 32578 . + . ID=gene-LDO49_RS01345;Name=LDO49_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01345;old_locus_tag=BCEP4_1020035 NZ_CAJZAV010000005.1 Protein Homology CDS 31157 32578 . + 0 ID=cds-WP_060072079.1;Parent=gene-LDO49_RS01345;Dbxref=GenBank:WP_060072079.1;Name=WP_060072079.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410876.1;locus_tag=LDO49_RS01345;product=MFS transporter;protein_id=WP_060072079.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 32778 33008 . - . ID=gene-LDO49_RS01350;Name=LDO49_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01350;old_locus_tag=BCEP4_1020036 NZ_CAJZAV010000005.1 Protein Homology CDS 32778 33008 . - 0 ID=cds-WP_021160313.1;Parent=gene-LDO49_RS01350;Dbxref=GenBank:WP_021160313.1;Name=WP_021160313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481962.1;locus_tag=LDO49_RS01350;product=hypothetical protein;protein_id=WP_021160313.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 33217 33648 . + . ID=gene-LDO49_RS01355;Name=LDO49_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01355;old_locus_tag=BCEP4_1020037 NZ_CAJZAV010000005.1 Protein Homology CDS 33217 33648 . + 0 ID=cds-WP_059494943.1;Parent=gene-LDO49_RS01355;Dbxref=GenBank:WP_059494943.1;Name=WP_059494943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354137.1;locus_tag=LDO49_RS01355;product=YciI family protein;protein_id=WP_059494943.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 33715 34311 . - . ID=gene-LDO49_RS01360;Name=LDO49_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01360;old_locus_tag=BCEP4_1020038 NZ_CAJZAV010000005.1 Protein Homology CDS 33715 34311 . - 0 ID=cds-WP_021160310.1;Parent=gene-LDO49_RS01360;Dbxref=GenBank:WP_021160310.1;Name=WP_021160310.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354136.1;locus_tag=LDO49_RS01360;product=TetR/AcrR family transcriptional regulator;protein_id=WP_021160310.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 34494 35264 . + . ID=gene-LDO49_RS01365;Name=LDO49_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01365;old_locus_tag=BCEP4_1020039 NZ_CAJZAV010000005.1 Protein Homology CDS 34494 35264 . + 0 ID=cds-WP_060072081.1;Parent=gene-LDO49_RS01365;Dbxref=GenBank:WP_060072081.1;Name=WP_060072081.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898499.1;locus_tag=LDO49_RS01365;product=alpha/beta hydrolase;protein_id=WP_060072081.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 35352 36158 . + . ID=gene-LDO49_RS01370;Name=LDO49_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01370;old_locus_tag=BCEP4_1020040 NZ_CAJZAV010000005.1 Protein Homology CDS 35352 36158 . + 0 ID=cds-WP_060072082.1;Parent=gene-LDO49_RS01370;Dbxref=GenBank:WP_060072082.1;Name=WP_060072082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354134.1;locus_tag=LDO49_RS01370;product=DinB family protein;protein_id=WP_060072082.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 36155 36949 . + . ID=gene-LDO49_RS01375;Name=LDO49_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01375;old_locus_tag=BCEP4_1020041 NZ_CAJZAV010000005.1 Protein Homology CDS 36155 36949 . + 0 ID=cds-WP_081067240.1;Parent=gene-LDO49_RS01375;Dbxref=GenBank:WP_081067240.1;Name=WP_081067240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029778.1;locus_tag=LDO49_RS01375;product=alpha/beta fold hydrolase;protein_id=WP_081067240.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 37029 37907 . + . ID=gene-LDO49_RS01380;Name=LDO49_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01380;old_locus_tag=BCEP4_1020042 NZ_CAJZAV010000005.1 Protein Homology CDS 37029 37907 . + 0 ID=cds-WP_059552768.1;Parent=gene-LDO49_RS01380;Dbxref=GenBank:WP_059552768.1;Name=WP_059552768.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339503.1;locus_tag=LDO49_RS01380;product=alpha/beta hydrolase;protein_id=WP_059552768.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 37976 38335 . + . ID=gene-LDO49_RS01385;Name=LDO49_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01385;old_locus_tag=BCEP4_1020043 NZ_CAJZAV010000005.1 GeneMarkS-2+ CDS 37976 38335 . + 0 ID=cds-WP_060072084.1;Parent=gene-LDO49_RS01385;Dbxref=GenBank:WP_060072084.1;Name=WP_060072084.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS01385;product=hypothetical protein;protein_id=WP_060072084.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 38383 38616 . - . ID=gene-LDO49_RS01390;Name=LDO49_RS01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01390;old_locus_tag=BCEP4_1020044 NZ_CAJZAV010000005.1 Protein Homology CDS 38383 38616 . - 0 ID=cds-WP_021160304.1;Parent=gene-LDO49_RS01390;Dbxref=GenBank:WP_021160304.1;Name=WP_021160304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485435.1;locus_tag=LDO49_RS01390;product=hypothetical protein;protein_id=WP_021160304.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 38824 39723 . - . ID=gene-LDO49_RS01395;Name=LDO49_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01395;old_locus_tag=BCEP4_1020046 NZ_CAJZAV010000005.1 Protein Homology CDS 38824 39723 . - 0 ID=cds-WP_059620307.1;Parent=gene-LDO49_RS01395;Dbxref=GenBank:WP_059620307.1;Name=WP_059620307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415834.1;locus_tag=LDO49_RS01395;product=hypothetical protein;protein_id=WP_059620307.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 39802 40140 . + . ID=gene-LDO49_RS01400;Name=LDO49_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01400;old_locus_tag=BCEP4_1020045 NZ_CAJZAV010000005.1 Protein Homology CDS 39802 40140 . + 0 ID=cds-WP_059649702.1;Parent=gene-LDO49_RS01400;Dbxref=GenBank:WP_059649702.1;Name=WP_059649702.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547066.1;locus_tag=LDO49_RS01400;product=helix-turn-helix domain-containing protein;protein_id=WP_059649702.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 41199 43127 . + . ID=gene-LDO49_RS01405;Name=LDO49_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01405;old_locus_tag=BCEP4_1020048 NZ_CAJZAV010000005.1 Protein Homology CDS 41199 43127 . + 0 ID=cds-WP_124842066.1;Parent=gene-LDO49_RS01405;Dbxref=GenBank:WP_124842066.1;Name=WP_124842066.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004552117.1;locus_tag=LDO49_RS01405;product=S53 family peptidase;protein_id=WP_124842066.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 43105 43389 . - . ID=gene-LDO49_RS01410;Name=LDO49_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01410;old_locus_tag=BCEP4_1020049 NZ_CAJZAV010000005.1 GeneMarkS-2+ CDS 43105 43389 . - 0 ID=cds-WP_060072088.1;Parent=gene-LDO49_RS01410;Dbxref=GenBank:WP_060072088.1;Name=WP_060072088.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS01410;product=hypothetical protein;protein_id=WP_060072088.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 43449 43832 . - . ID=gene-LDO49_RS01415;Name=LDO49_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01415 NZ_CAJZAV010000005.1 Protein Homology CDS 43449 43832 . - 0 ID=cds-WP_185735117.1;Parent=gene-LDO49_RS01415;Dbxref=GenBank:WP_185735117.1;Name=WP_185735117.1;Ontology_term=GO:0015031,GO:0015891,GO:0055085,GO:0031992,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=energy transducer activity|0031992||IEA;go_process=protein transport|0015031||IEA,siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF015506.6;locus_tag=LDO49_RS01415;product=energy transducer TonB;protein_id=WP_185735117.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 44385 45524 . - . ID=gene-LDO49_RS01420;Name=pqqE;gbkey=Gene;gene=pqqE;gene_biotype=protein_coding;locus_tag=LDO49_RS01420;old_locus_tag=BCEP4_1020051 NZ_CAJZAV010000005.1 Protein Homology CDS 44385 45524 . - 0 ID=cds-WP_060072092.1;Parent=gene-LDO49_RS01420;Dbxref=GenBank:WP_060072092.1;Name=WP_060072092.1;Ontology_term=GO:0018149,GO:0018189,GO:0051539;gbkey=CDS;gene=pqqE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptide cross-linking|0018149||IEA,pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339500.1;locus_tag=LDO49_RS01420;product=pyrroloquinoline quinone biosynthesis protein PqqE;protein_id=WP_060072092.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 45526 45807 . - . ID=gene-LDO49_RS01425;Name=pqqD;gbkey=Gene;gene=pqqD;gene_biotype=protein_coding;locus_tag=LDO49_RS01425;old_locus_tag=BCEP4_1020052 NZ_CAJZAV010000005.1 Protein Homology CDS 45526 45807 . - 0 ID=cds-WP_021160296.1;Parent=gene-LDO49_RS01425;Dbxref=GenBank:WP_021160296.1;Name=WP_021160296.1;Ontology_term=GO:0018189,GO:0048038;gbkey=CDS;gene=pqqD;go_function=quinone binding|0048038||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751646.1;locus_tag=LDO49_RS01425;product=pyrroloquinoline quinone biosynthesis peptide chaperone PqqD;protein_id=WP_021160296.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 45804 46523 . - . ID=gene-LDO49_RS01430;Name=pqqC;gbkey=Gene;gene=pqqC;gene_biotype=protein_coding;locus_tag=LDO49_RS01430;old_locus_tag=BCEP4_1020053 NZ_CAJZAV010000005.1 Protein Homology CDS 45804 46523 . - 0 ID=cds-WP_059494956.1;Parent=gene-LDO49_RS01430;Dbxref=GenBank:WP_059494956.1;Name=WP_059494956.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqC;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547064.1;locus_tag=LDO49_RS01430;product=pyrroloquinoline-quinone synthase PqqC;protein_id=WP_059494956.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 46526 47449 . - . ID=gene-LDO49_RS01435;Name=pqqB;gbkey=Gene;gene=pqqB;gene_biotype=protein_coding;locus_tag=LDO49_RS01435;old_locus_tag=BCEP4_1020054 NZ_CAJZAV010000005.1 Protein Homology CDS 46526 47449 . - 0 ID=cds-WP_021160294.1;Parent=gene-LDO49_RS01435;Dbxref=GenBank:WP_021160294.1;Name=WP_021160294.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqB;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547063.1;locus_tag=LDO49_RS01435;product=pyrroloquinoline quinone biosynthesis protein PqqB;protein_id=WP_021160294.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 47511 47585 . - . ID=gene-LDO49_RS01440;Name=pqqA;gbkey=Gene;gene=pqqA;gene_biotype=protein_coding;locus_tag=LDO49_RS01440 NZ_CAJZAV010000005.1 Protein Homology CDS 47511 47585 . - 0 ID=cds-WP_006485436.1;Parent=gene-LDO49_RS01440;Dbxref=GenBank:WP_006485436.1;Name=WP_006485436.1;Ontology_term=GO:0018189,GO:0003824;gbkey=CDS;gene=pqqA;go_function=catalytic activity|0003824||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007178434.1;locus_tag=LDO49_RS01440;product=pyrroloquinoline quinone precursor peptide PqqA;protein_id=WP_006485436.1;transl_table=11 NZ_CAJZAV010000005.1 RefSeq gene 47898 49916 . - . ID=gene-LDO49_RS01445;Name=LDO49_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01445;old_locus_tag=BCEP4_1020055 NZ_CAJZAV010000005.1 Protein Homology CDS 47898 49916 . - 0 ID=cds-WP_060072094.1;Parent=gene-LDO49_RS01445;Dbxref=GenBank:WP_060072094.1;Name=WP_060072094.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339497.1;locus_tag=LDO49_RS01445;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_060072094.1;transl_table=11 ##sequence-region NZ_CAJZAV010000006.1 1 21583 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000006.1 RefSeq region 1 21583 . + . ID=NZ_CAJZAV010000006.1:1..21583;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_103 NZ_CAJZAV010000006.1 RefSeq gene 1 1287 . - . ID=gene-LDO49_RS01450;Name=LDO49_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01450;partial=true;start_range=.,1 NZ_CAJZAV010000006.1 Protein Homology CDS 1 1287 . - 0 ID=cds-WP_224051315.1;Parent=gene-LDO49_RS01450;Dbxref=GenBank:WP_224051315.1;Name=WP_224051315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548081.1;locus_tag=LDO49_RS01450;partial=true;product=glycosyltransferase family 4 protein;protein_id=WP_224051315.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000006.1 RefSeq gene 1374 2462 . + . ID=gene-LDO49_RS01455;Name=LDO49_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01455;old_locus_tag=BCEP4_1030002 NZ_CAJZAV010000006.1 Protein Homology CDS 1374 2462 . + 0 ID=cds-WP_060071513.1;Parent=gene-LDO49_RS01455;Dbxref=GenBank:WP_060071513.1;Name=WP_060071513.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339952.1;locus_tag=LDO49_RS01455;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_060071513.1;transl_table=11 NZ_CAJZAV010000006.1 RefSeq gene 2440 3906 . - . ID=gene-LDO49_RS01460;Name=LDO49_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01460;old_locus_tag=BCEP4_1030003 NZ_CAJZAV010000006.1 Protein Homology CDS 2440 3906 . - 0 ID=cds-WP_069254352.1;Parent=gene-LDO49_RS01460;Dbxref=GenBank:WP_069254352.1;Name=WP_069254352.1;Ontology_term=GO:0140327,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760660.1;locus_tag=LDO49_RS01460;product=flippase;protein_id=WP_069254352.1;transl_table=11 NZ_CAJZAV010000006.1 RefSeq gene 3926 6118 . - . ID=gene-LDO49_RS01465;Name=LDO49_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01465;old_locus_tag=BCEP4_1030004 NZ_CAJZAV010000006.1 Protein Homology CDS 3926 6118 . - 0 ID=cds-WP_060071462.1;Parent=gene-LDO49_RS01465;Dbxref=GenBank:WP_060071462.1;Name=WP_060071462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467866.1;locus_tag=LDO49_RS01465;product=hypothetical protein;protein_id=WP_060071462.1;transl_table=11 NZ_CAJZAV010000006.1 RefSeq gene 6607 7671 . + . ID=gene-LDO49_RS01470;Name=LDO49_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01470;old_locus_tag=BCEP4_1030006 NZ_CAJZAV010000006.1 Protein Homology CDS 6607 7671 . + 0 ID=cds-WP_021158736.1;Parent=gene-LDO49_RS01470;Dbxref=GenBank:WP_021158736.1;Name=WP_021158736.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658393.1;locus_tag=LDO49_RS01470;product=acyltransferase family protein;protein_id=WP_021158736.1;transl_table=11 NZ_CAJZAV010000006.1 RefSeq gene 7708 8754 . + . ID=gene-LDO49_RS01475;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=LDO49_RS01475;old_locus_tag=BCEP4_1030007 NZ_CAJZAV010000006.1 Protein Homology CDS 7708 8754 . + 0 ID=cds-WP_059493470.1;Parent=gene-LDO49_RS01475;Dbxref=GenBank:WP_059493470.1;Name=WP_059493470.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028634.1;locus_tag=LDO49_RS01475;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_059493470.1;transl_table=11 NZ_CAJZAV010000006.1 RefSeq pseudogene 8741 9688 . + . ID=gene-LDO49_RS01480;Name=LDO49_RS01480;end_range=9688,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS01480;old_locus_tag=BCEP4_1030008;partial=true;pseudo=true NZ_CAJZAV010000006.1 Protein Homology CDS 8741 9688 . + 0 ID=cds-LDO49_RS01480;Parent=gene-LDO49_RS01480;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003824;end_range=9688,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338480.1;locus_tag=LDO49_RS01480;partial=true;product=NAD-dependent epimerase/dehydratase family protein;pseudo=true;transl_table=11 NZ_CAJZAV010000006.1 RefSeq gene 9818 11008 . - . ID=gene-LDO49_RS01485;Name=LDO49_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01485;old_locus_tag=BCEP4_1030009 NZ_CAJZAV010000006.1 Protein Homology CDS 9818 11008 . - 0 ID=cds-WP_048022068.1;Parent=gene-LDO49_RS01485;Dbxref=GenBank:WP_048022068.1;Name=WP_048022068.1;Ontology_term=GO:0019346,GO:0071268,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA,homocysteine biosynthetic process|0071268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020071045.1;locus_tag=LDO49_RS01485;product=O-succinylhomoserine sulfhydrylase;protein_id=WP_048022068.1;transl_table=11 NZ_CAJZAV010000006.1 RefSeq gene 11256 12788 . - . ID=gene-LDO49_RS01490;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=LDO49_RS01490;old_locus_tag=BCEP4_1030010 NZ_CAJZAV010000006.1 Protein Homology CDS 11256 12788 . - 0 ID=cds-WP_021158732.1;Parent=gene-LDO49_RS01490;Dbxref=GenBank:WP_021158732.1;Name=WP_021158732.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544727.1;locus_tag=LDO49_RS01490;product=amidophosphoribosyltransferase;protein_id=WP_021158732.1;transl_table=11 NZ_CAJZAV010000006.1 RefSeq gene 12840 13334 . - . ID=gene-LDO49_RS01495;Name=LDO49_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01495;old_locus_tag=BCEP4_1030011 NZ_CAJZAV010000006.1 Protein Homology CDS 12840 13334 . - 0 ID=cds-WP_006491262.1;Parent=gene-LDO49_RS01495;Dbxref=GenBank:WP_006491262.1;Name=WP_006491262.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188369.1;locus_tag=LDO49_RS01495;product=CvpA family protein;protein_id=WP_006491262.1;transl_table=11 NZ_CAJZAV010000006.1 RefSeq gene 13341 14177 . - . ID=gene-LDO49_RS01500;Name=LDO49_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01500;old_locus_tag=BCEP4_1030012 NZ_CAJZAV010000006.1 Protein Homology CDS 13341 14177 . - 0 ID=cds-WP_060071460.1;Parent=gene-LDO49_RS01500;Dbxref=GenBank:WP_060071460.1;Name=WP_060071460.1;Ontology_term=GO:0042834,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548088.1;locus_tag=LDO49_RS01500;product=SPOR domain-containing protein;protein_id=WP_060071460.1;transl_table=11 NZ_CAJZAV010000006.1 RefSeq gene 14207 15517 . - . ID=gene-LDO49_RS01505;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=LDO49_RS01505;old_locus_tag=BCEP4_1030013 NZ_CAJZAV010000006.1 Protein Homology CDS 14207 15517 . - 0 ID=cds-WP_021158730.1;Parent=gene-LDO49_RS01505;Dbxref=GenBank:WP_021158730.1;Name=WP_021158730.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089192.1;locus_tag=LDO49_RS01505;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_021158730.1;transl_table=11 NZ_CAJZAV010000006.1 RefSeq gene 15618 16490 . - . ID=gene-LDO49_RS01510;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=LDO49_RS01510;old_locus_tag=BCEP4_1030014 NZ_CAJZAV010000006.1 Protein Homology CDS 15618 16490 . - 0 ID=cds-WP_021158729.1;Parent=gene-LDO49_RS01510;Dbxref=GenBank:WP_021158729.1;Name=WP_021158729.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012403665.1;locus_tag=LDO49_RS01510;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_021158729.1;transl_table=11 NZ_CAJZAV010000006.1 RefSeq gene 16555 17370 . - . ID=gene-LDO49_RS01515;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=LDO49_RS01515;old_locus_tag=BCEP4_1030015 NZ_CAJZAV010000006.1 Protein Homology CDS 16555 17370 . - 0 ID=cds-WP_027791147.1;Parent=gene-LDO49_RS01515;Dbxref=GenBank:WP_027791147.1;Name=WP_027791147.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217295.1;locus_tag=LDO49_RS01515;product=tryptophan synthase subunit alpha;protein_id=WP_027791147.1;transl_table=11 NZ_CAJZAV010000006.1 RefSeq gene 17412 18266 . - . ID=gene-LDO49_RS01520;Name=LDO49_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01520;old_locus_tag=BCEP4_1030016 NZ_CAJZAV010000006.1 Protein Homology CDS 17412 18266 . - 0 ID=cds-WP_021158728.1;Parent=gene-LDO49_RS01520;Dbxref=GenBank:WP_021158728.1;Name=WP_021158728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329989.1;locus_tag=LDO49_RS01520;product=DNA-methyltransferase;protein_id=WP_021158728.1;transl_table=11 NZ_CAJZAV010000006.1 RefSeq gene 18276 19469 . - . ID=gene-LDO49_RS01525;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=LDO49_RS01525;old_locus_tag=BCEP4_1030017 NZ_CAJZAV010000006.1 Protein Homology CDS 18276 19469 . - 0 ID=cds-WP_027791145.1;Parent=gene-LDO49_RS01525;Dbxref=GenBank:WP_027791145.1;Name=WP_027791145.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329990.1;locus_tag=LDO49_RS01525;product=tryptophan synthase subunit beta;protein_id=WP_027791145.1;transl_table=11 NZ_CAJZAV010000006.1 RefSeq gene 19525 20226 . - . ID=gene-LDO49_RS01530;Name=LDO49_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01530;old_locus_tag=BCEP4_1030018 NZ_CAJZAV010000006.1 Protein Homology CDS 19525 20226 . - 0 ID=cds-WP_059621923.1;Parent=gene-LDO49_RS01530;Dbxref=GenBank:WP_059621923.1;Name=WP_059621923.1;Ontology_term=GO:0000162,GO:0004640;gbkey=CDS;go_function=phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493214.1;locus_tag=LDO49_RS01530;product=phosphoribosylanthranilate isomerase;protein_id=WP_059621923.1;transl_table=11 NZ_CAJZAV010000006.1 RefSeq gene 20223 21035 . - . ID=gene-LDO49_RS01535;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=LDO49_RS01535;old_locus_tag=BCEP4_1030019 NZ_CAJZAV010000006.1 Protein Homology CDS 20223 21035 . - 0 ID=cds-WP_060071458.1;Parent=gene-LDO49_RS01535;Dbxref=GenBank:WP_060071458.1;Name=WP_060071458.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399585.1;locus_tag=LDO49_RS01535;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_060071458.1;transl_table=11 NZ_CAJZAV010000006.1 RefSeq gene 21035 21306 . - . ID=gene-LDO49_RS37725;Name=LDO49_RS37725;end_range=21306,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37725;old_locus_tag=BCEP4_1030020;partial=true NZ_CAJZAV010000006.1 Protein Homology CDS 21035 21306 . - 2 ID=cds-WP_443797892.1;Parent=gene-LDO49_RS37725;Dbxref=GenBank:WP_443797892.1;Name=WP_443797892.1;end_range=21306,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548094.1;locus_tag=LDO49_RS37725;partial=true;product=FimV/HubP family polar landmark protein;protein_id=WP_443797892.1;transl_table=11 NZ_CAJZAV010000006.1 RefSeq pseudogene 21317 21583 . - . ID=gene-LDO49_RS37730;Name=LDO49_RS37730;end_range=21583,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37730;partial=true;pseudo=true;start_range=.,21317 NZ_CAJZAV010000006.1 Protein Homology CDS 21317 21583 . - 0 ID=cds-LDO49_RS37730;Parent=gene-LDO49_RS37730;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=21583,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355722.1;locus_tag=LDO49_RS37730;partial=true;product=FimV/HubP family polar landmark protein;pseudo=true;start_range=.,21317;transl_table=11 ##sequence-region NZ_CAJZAV010000007.1 1 19760 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000007.1 RefSeq region 1 19760 . + . ID=NZ_CAJZAV010000007.1:1..19760;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_104 NZ_CAJZAV010000007.1 RefSeq gene 230 1636 . + . ID=gene-LDO49_RS01545;Name=LDO49_RS01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01545;old_locus_tag=BCEP4_1040001 NZ_CAJZAV010000007.1 Protein Homology CDS 230 1636 . + 0 ID=cds-WP_048024905.1;Parent=gene-LDO49_RS01545;Dbxref=GenBank:WP_048024905.1;Name=WP_048024905.1;Ontology_term=GO:0006935;gbkey=CDS;go_process=chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339489.1;locus_tag=LDO49_RS01545;product=methyl-accepting chemotaxis protein;protein_id=WP_048024905.1;transl_table=11 NZ_CAJZAV010000007.1 RefSeq gene 1668 4079 . - . ID=gene-LDO49_RS01550;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=LDO49_RS01550;old_locus_tag=BCEP4_1040002 NZ_CAJZAV010000007.1 Protein Homology CDS 1668 4079 . - 0 ID=cds-WP_060074574.1;Parent=gene-LDO49_RS01550;Dbxref=GenBank:WP_060074574.1;Name=WP_060074574.1;Ontology_term=GO:0009252,GO:0003824,GO:0009274;gbkey=CDS;gene=pbpC;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339488.1;locus_tag=LDO49_RS01550;product=penicillin-binding protein 1C;protein_id=WP_060074574.1;transl_table=11 NZ_CAJZAV010000007.1 RefSeq gene 4125 10121 . - . ID=gene-LDO49_RS01555;Name=LDO49_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01555;old_locus_tag=BCEP4_1040003 NZ_CAJZAV010000007.1 Protein Homology CDS 4125 10121 . - 0 ID=cds-WP_060074573.1;Parent=gene-LDO49_RS01555;Dbxref=GenBank:WP_060074573.1;Name=WP_060074573.1;Ontology_term=GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547051.1;locus_tag=LDO49_RS01555;product=MG2 domain-containing protein;protein_id=WP_060074573.1;transl_table=11 NZ_CAJZAV010000007.1 RefSeq gene 10134 10418 . + . ID=gene-LDO49_RS01560;Name=LDO49_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01560 NZ_CAJZAV010000007.1 GeneMarkS-2+ CDS 10134 10418 . + 0 ID=cds-WP_155634263.1;Parent=gene-LDO49_RS01560;Dbxref=GenBank:WP_155634263.1;Name=WP_155634263.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS01560;product=hypothetical protein;protein_id=WP_155634263.1;transl_table=11 NZ_CAJZAV010000007.1 RefSeq gene 10430 11683 . + . ID=gene-LDO49_RS01565;Name=LDO49_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01565;old_locus_tag=BCEP4_1040004 NZ_CAJZAV010000007.1 Protein Homology CDS 10430 11683 . + 0 ID=cds-WP_042978218.1;Parent=gene-LDO49_RS01565;Dbxref=GenBank:WP_042978218.1;Name=WP_042978218.1;Ontology_term=GO:0042953,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018435426.1;locus_tag=LDO49_RS01565;product=lipoprotein-releasing ABC transporter permease subunit;protein_id=WP_042978218.1;transl_table=11 NZ_CAJZAV010000007.1 RefSeq gene 11712 12527 . - . ID=gene-LDO49_RS01570;Name=LDO49_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01570;old_locus_tag=BCEP4_1040005 NZ_CAJZAV010000007.1 Protein Homology CDS 11712 12527 . - 0 ID=cds-WP_048024901.1;Parent=gene-LDO49_RS01570;Dbxref=GenBank:WP_048024901.1;Name=WP_048024901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486126.1;locus_tag=LDO49_RS01570;product=hypothetical protein;protein_id=WP_048024901.1;transl_table=11 NZ_CAJZAV010000007.1 RefSeq gene 13118 15076 . + . ID=gene-LDO49_RS01575;Name=LDO49_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01575;old_locus_tag=BCEP4_1040008 NZ_CAJZAV010000007.1 Protein Homology CDS 13118 15076 . + 0 ID=cds-WP_059622399.1;Parent=gene-LDO49_RS01575;Dbxref=GenBank:WP_059622399.1;Name=WP_059622399.1;Ontology_term=GO:0006508,GO:0004177,GO:0008239;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,dipeptidyl-peptidase activity|0008239||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354114.1;locus_tag=LDO49_RS01575;product=Xaa-Pro dipeptidyl-peptidase;protein_id=WP_059622399.1;transl_table=11 NZ_CAJZAV010000007.1 RefSeq gene 15580 16542 . + . ID=gene-LDO49_RS01580;Name=LDO49_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01580;old_locus_tag=BCEP4_1040009 NZ_CAJZAV010000007.1 Protein Homology CDS 15580 16542 . + 0 ID=cds-WP_059487071.1;Parent=gene-LDO49_RS01580;Dbxref=GenBank:WP_059487071.1;Name=WP_059487071.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218289.1;locus_tag=LDO49_RS01580;product=SAM-dependent methyltransferase;protein_id=WP_059487071.1;transl_table=11 NZ_CAJZAV010000007.1 RefSeq gene 16590 17693 . + . ID=gene-LDO49_RS01585;Name=LDO49_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01585;old_locus_tag=BCEP4_1040010 NZ_CAJZAV010000007.1 Protein Homology CDS 16590 17693 . + 0 ID=cds-WP_059487069.1;Parent=gene-LDO49_RS01585;Dbxref=GenBank:WP_059487069.1;Name=WP_059487069.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040195.5;locus_tag=LDO49_RS01585;product=terpene synthase family protein;protein_id=WP_059487069.1;transl_table=11 NZ_CAJZAV010000007.1 RefSeq gene 17828 18757 . - . ID=gene-LDO49_RS01590;Name=LDO49_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01590;old_locus_tag=BCEP4_1040011 NZ_CAJZAV010000007.1 Protein Homology CDS 17828 18757 . - 0 ID=cds-WP_224051316.1;Parent=gene-LDO49_RS01590;Dbxref=GenBank:WP_224051316.1;Name=WP_224051316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028756.1;locus_tag=LDO49_RS01590;product=2-hydroxyacid dehydrogenase;protein_id=WP_224051316.1;transl_table=11 NZ_CAJZAV010000007.1 RefSeq gene 18922 19628 . + . ID=gene-LDO49_RS01595;Name=LDO49_RS01595;end_range=19628,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01595;old_locus_tag=BCEP4_1040012;partial=true NZ_CAJZAV010000007.1 Protein Homology CDS 18922 19628 . + 0 ID=cds-WP_224051318.1;Parent=gene-LDO49_RS01595;Dbxref=GenBank:WP_224051318.1;Name=WP_224051318.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;end_range=19628,.;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411484.1;locus_tag=LDO49_RS01595;partial=true;product=glycine betaine ABC transporter substrate-binding protein;protein_id=WP_224051318.1;transl_table=11 ##sequence-region NZ_CAJZAV010000008.1 1 25536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000008.1 RefSeq region 1 25536 . + . ID=NZ_CAJZAV010000008.1:1..25536;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_105 NZ_CAJZAV010000008.1 RefSeq gene 1 417 . - . ID=gene-LDO49_RS01600;Name=LDO49_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01600;partial=true;start_range=.,1 NZ_CAJZAV010000008.1 Protein Homology CDS 1 417 . - 0 ID=cds-WP_290369687.1;Parent=gene-LDO49_RS01600;Dbxref=GenBank:WP_290369687.1;Name=WP_290369687.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548203.1;locus_tag=LDO49_RS01600;partial=true;product=sigma factor;protein_id=WP_290369687.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000008.1 RefSeq gene 414 830 . - . ID=gene-LDO49_RS01605;Name=LDO49_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01605;old_locus_tag=BCEP4_1050002 NZ_CAJZAV010000008.1 Protein Homology CDS 414 830 . - 0 ID=cds-WP_021164038.1;Parent=gene-LDO49_RS01605;Dbxref=GenBank:WP_021164038.1;Name=WP_021164038.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497296.1;locus_tag=LDO49_RS01605;product=VOC family protein;protein_id=WP_021164038.1;transl_table=11 NZ_CAJZAV010000008.1 RefSeq gene 866 1285 . - . ID=gene-LDO49_RS01610;Name=LDO49_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01610;old_locus_tag=BCEP4_1050003 NZ_CAJZAV010000008.1 Protein Homology CDS 866 1285 . - 0 ID=cds-WP_021164039.1;Parent=gene-LDO49_RS01610;Dbxref=GenBank:WP_021164039.1;Name=WP_021164039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757945.1;locus_tag=LDO49_RS01610;product=YciI family protein;protein_id=WP_021164039.1;transl_table=11 NZ_CAJZAV010000008.1 RefSeq gene 1411 1764 . - . ID=gene-LDO49_RS01615;Name=LDO49_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01615;old_locus_tag=BCEP4_1050004 NZ_CAJZAV010000008.1 Protein Homology CDS 1411 1764 . - 0 ID=cds-WP_021164040.1;Parent=gene-LDO49_RS01615;Dbxref=GenBank:WP_021164040.1;Name=WP_021164040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365581.1;locus_tag=LDO49_RS01615;product=YciI family protein;protein_id=WP_021164040.1;transl_table=11 NZ_CAJZAV010000008.1 RefSeq pseudogene 1969 3867 . + . ID=gene-LDO49_RS01620;Name=LDO49_RS01620;end_range=3867,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS01620;old_locus_tag=BCEP4_1050005;partial=true;pseudo=true NZ_CAJZAV010000008.1 Protein Homology CDS 1969 3867 . + 0 ID=cds-LDO49_RS01620;Parent=gene-LDO49_RS01620;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3867,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009959949.1;locus_tag=LDO49_RS01620;partial=true;product=ExeM/NucH family extracellular endonuclease;pseudo=true;transl_table=11 NZ_CAJZAV010000008.1 RefSeq gene 4119 4505 . + . ID=gene-LDO49_RS01625;Name=LDO49_RS01625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01625;old_locus_tag=BCEP4_1050006 NZ_CAJZAV010000008.1 Protein Homology CDS 4119 4505 . + 0 ID=cds-WP_021157600.1;Parent=gene-LDO49_RS01625;Dbxref=GenBank:WP_021157600.1;Name=WP_021157600.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355880.1;locus_tag=LDO49_RS01625;product=DUF883 family protein;protein_id=WP_021157600.1;transl_table=11 NZ_CAJZAV010000008.1 RefSeq gene 4570 5154 . + . ID=gene-LDO49_RS01630;Name=LDO49_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01630;old_locus_tag=BCEP4_1050007 NZ_CAJZAV010000008.1 Protein Homology CDS 4570 5154 . + 0 ID=cds-WP_021157601.1;Parent=gene-LDO49_RS01630;Dbxref=GenBank:WP_021157601.1;Name=WP_021157601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365579.1;locus_tag=LDO49_RS01630;product=BPSL1445 family SYLF domain-containing lipoprotein;protein_id=WP_021157601.1;transl_table=11 NZ_CAJZAV010000008.1 RefSeq gene 5405 6457 . + . ID=gene-LDO49_RS01635;Name=LDO49_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01635;old_locus_tag=BCEP4_1050008 NZ_CAJZAV010000008.1 Protein Homology CDS 5405 6457 . + 0 ID=cds-WP_042973615.1;Parent=gene-LDO49_RS01635;Dbxref=GenBank:WP_042973615.1;Name=WP_042973615.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487821.1;locus_tag=LDO49_RS01635;product=AI-2E family transporter;protein_id=WP_042973615.1;transl_table=11 NZ_CAJZAV010000008.1 RefSeq gene 6501 7031 . - . ID=gene-LDO49_RS01640;Name=LDO49_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01640;old_locus_tag=BCEP4_1050009 NZ_CAJZAV010000008.1 Protein Homology CDS 6501 7031 . - 0 ID=cds-WP_372585822.1;Parent=gene-LDO49_RS01640;Dbxref=GenBank:WP_372585822.1;Name=WP_372585822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479501.1;locus_tag=LDO49_RS01640;product=thioesterase;protein_id=WP_372585822.1;transl_table=11 NZ_CAJZAV010000008.1 RefSeq gene 7233 8249 . - . ID=gene-LDO49_RS01645;Name=LDO49_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01645;old_locus_tag=BCEP4_1050010 NZ_CAJZAV010000008.1 Protein Homology CDS 7233 8249 . - 0 ID=cds-WP_060071337.1;Parent=gene-LDO49_RS01645;Dbxref=GenBank:WP_060071337.1;Name=WP_060071337.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255233.1;locus_tag=LDO49_RS01645;product=NADP-dependent oxidoreductase;protein_id=WP_060071337.1;transl_table=11 NZ_CAJZAV010000008.1 RefSeq gene 8287 9075 . - . ID=gene-LDO49_RS01650;Name=LDO49_RS01650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01650;old_locus_tag=BCEP4_1050011 NZ_CAJZAV010000008.1 Protein Homology CDS 8287 9075 . - 0 ID=cds-WP_060071335.1;Parent=gene-LDO49_RS01650;Dbxref=GenBank:WP_060071335.1;Name=WP_060071335.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089074.1;locus_tag=LDO49_RS01650;product=SDR family oxidoreductase;protein_id=WP_060071335.1;transl_table=11 NZ_CAJZAV010000008.1 RefSeq gene 9534 10124 . - . ID=gene-LDO49_RS01655;Name=LDO49_RS01655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01655;old_locus_tag=BCEP4_1050013 NZ_CAJZAV010000008.1 Protein Homology CDS 9534 10124 . - 0 ID=cds-WP_224051319.1;Parent=gene-LDO49_RS01655;Dbxref=GenBank:WP_224051319.1;Name=WP_224051319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479504.1;locus_tag=LDO49_RS01655;product=phosphatase PAP2 family protein;protein_id=WP_224051319.1;transl_table=11 NZ_CAJZAV010000008.1 RefSeq gene 10206 11522 . - . ID=gene-LDO49_RS01660;Name=LDO49_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01660;old_locus_tag=BCEP4_1050014 NZ_CAJZAV010000008.1 Protein Homology CDS 10206 11522 . - 0 ID=cds-WP_027791010.1;Parent=gene-LDO49_RS01660;Dbxref=GenBank:WP_027791010.1;Name=WP_027791010.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493178.1;locus_tag=LDO49_RS01660;product=Nramp family divalent metal transporter;protein_id=WP_027791010.1;transl_table=11 NZ_CAJZAV010000008.1 RefSeq gene 11471 12523 . - . ID=gene-LDO49_RS01665;Name=LDO49_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01665;old_locus_tag=BCEP4_1050015 NZ_CAJZAV010000008.1 Protein Homology CDS 11471 12523 . - 0 ID=cds-WP_060071333.1;Parent=gene-LDO49_RS01665;Dbxref=GenBank:WP_060071333.1;Name=WP_060071333.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487833.1;locus_tag=LDO49_RS01665;product=helix-turn-helix domain-containing protein;protein_id=WP_060071333.1;transl_table=11 NZ_CAJZAV010000008.1 RefSeq gene 13022 13945 . + . ID=gene-LDO49_RS01670;Name=LDO49_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01670;old_locus_tag=BCEP4_1050016 NZ_CAJZAV010000008.1 Protein Homology CDS 13022 13945 . + 0 ID=cds-WP_059591686.1;Parent=gene-LDO49_RS01670;Dbxref=GenBank:WP_059591686.1;Name=WP_059591686.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548216.1;locus_tag=LDO49_RS01670;product=LysR family transcriptional regulator;protein_id=WP_059591686.1;transl_table=11 NZ_CAJZAV010000008.1 RefSeq gene 14102 14503 . + . ID=gene-LDO49_RS01675;Name=LDO49_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01675;old_locus_tag=BCEP4_1050017 NZ_CAJZAV010000008.1 Protein Homology CDS 14102 14503 . + 0 ID=cds-WP_021157610.1;Parent=gene-LDO49_RS01675;Dbxref=GenBank:WP_021157610.1;Name=WP_021157610.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548217.1;locus_tag=LDO49_RS01675;product=OsmC family protein;protein_id=WP_021157610.1;transl_table=11 NZ_CAJZAV010000008.1 RefSeq gene 14609 15490 . - . ID=gene-LDO49_RS01680;Name=LDO49_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01680;old_locus_tag=BCEP4_1050018 NZ_CAJZAV010000008.1 Protein Homology CDS 14609 15490 . - 0 ID=cds-WP_059591683.1;Parent=gene-LDO49_RS01680;Dbxref=GenBank:WP_059591683.1;Name=WP_059591683.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753361.1;locus_tag=LDO49_RS01680;product=Dyp-type peroxidase;protein_id=WP_059591683.1;transl_table=11 NZ_CAJZAV010000008.1 RefSeq gene 15982 17844 . + . ID=gene-LDO49_RS01685;Name=LDO49_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01685;old_locus_tag=BCEP4_1050019 NZ_CAJZAV010000008.1 Protein Homology CDS 15982 17844 . + 0 ID=cds-WP_059815003.1;Parent=gene-LDO49_RS01685;Dbxref=GenBank:WP_059815003.1;Name=WP_059815003.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330243.1;locus_tag=LDO49_RS01685;product=ABC transporter ATP-binding protein;protein_id=WP_059815003.1;transl_table=11 NZ_CAJZAV010000008.1 RefSeq gene 18053 18766 . + . ID=gene-LDO49_RS01690;Name=LDO49_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01690;old_locus_tag=BCEP4_1050020 NZ_CAJZAV010000008.1 Protein Homology CDS 18053 18766 . + 0 ID=cds-WP_048022213.1;Parent=gene-LDO49_RS01690;Dbxref=GenBank:WP_048022213.1;Name=WP_048022213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881512.1;locus_tag=LDO49_RS01690;product=riboflavin synthase;protein_id=WP_048022213.1;transl_table=11 NZ_CAJZAV010000008.1 RefSeq gene 18781 19359 . - . ID=gene-LDO49_RS01695;Name=LDO49_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01695;old_locus_tag=BCEP4_1050021 NZ_CAJZAV010000008.1 Protein Homology CDS 18781 19359 . - 0 ID=cds-WP_060071330.1;Parent=gene-LDO49_RS01695;Dbxref=GenBank:WP_060071330.1;Name=WP_060071330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487829.1;locus_tag=LDO49_RS01695;product=hypothetical protein;protein_id=WP_060071330.1;transl_table=11 NZ_CAJZAV010000008.1 RefSeq gene 19578 20819 . - . ID=gene-LDO49_RS01700;Name=LDO49_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01700;old_locus_tag=BCEP4_1050023 NZ_CAJZAV010000008.1 Protein Homology CDS 19578 20819 . - 0 ID=cds-WP_060071327.1;Parent=gene-LDO49_RS01700;Dbxref=GenBank:WP_060071327.1;Name=WP_060071327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217488.1;locus_tag=LDO49_RS01700;product=voltage-gated chloride channel family protein;protein_id=WP_060071327.1;transl_table=11 NZ_CAJZAV010000008.1 cmsearch riboswitch 20899 21002 . - . ID=id-NZ_CAJZAV010000008.1:20899..21002;Dbxref=RFAM:RF01734;Note=Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride%3B They are found in a wide variety of bacteria and archaea;bound_moiety=fluoride;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAV010000008.1 RefSeq gene 21095 22114 . - . ID=gene-LDO49_RS01705;Name=LDO49_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01705;old_locus_tag=BCEP4_1050024 NZ_CAJZAV010000008.1 Protein Homology CDS 21095 22114 . - 0 ID=cds-WP_048022204.1;Parent=gene-LDO49_RS01705;Dbxref=GenBank:WP_048022204.1;Name=WP_048022204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479514.1;locus_tag=LDO49_RS01705;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=WP_048022204.1;transl_table=11 NZ_CAJZAV010000008.1 RefSeq gene 22111 24420 . - . ID=gene-LDO49_RS01710;Name=LDO49_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01710;old_locus_tag=BCEP4_1050025 NZ_CAJZAV010000008.1 Protein Homology CDS 22111 24420 . - 0 ID=cds-WP_060071325.1;Parent=gene-LDO49_RS01710;Dbxref=GenBank:WP_060071325.1;Name=WP_060071325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355897.1;locus_tag=LDO49_RS01710;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_060071325.1;transl_table=11 NZ_CAJZAV010000008.1 RefSeq gene 24417 25124 . - . ID=gene-LDO49_RS01715;Name=LDO49_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01715;old_locus_tag=BCEP4_1050026 NZ_CAJZAV010000008.1 Protein Homology CDS 24417 25124 . - 0 ID=cds-WP_059484112.1;Parent=gene-LDO49_RS01715;Dbxref=GenBank:WP_059484112.1;Name=WP_059484112.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398022.1;locus_tag=LDO49_RS01715;product=chemotaxis protein CheW;protein_id=WP_059484112.1;transl_table=11 NZ_CAJZAV010000008.1 RefSeq pseudogene 25170 25378 . - . ID=gene-LDO49_RS37735;Name=LDO49_RS37735;end_range=25378,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37735;partial=true;pseudo=true NZ_CAJZAV010000008.1 Protein Homology CDS 25170 25378 . - 2 ID=cds-LDO49_RS37735;Parent=gene-LDO49_RS37735;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=25378,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404208.1;locus_tag=LDO49_RS37735;partial=true;product=CheR family methyltransferase;pseudo=true;transl_table=11 NZ_CAJZAV010000008.1 RefSeq pseudogene 25389 25536 . - . ID=gene-LDO49_RS37740;Name=LDO49_RS37740;end_range=25536,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37740;old_locus_tag=BCEP4_1050027;partial=true;pseudo=true;start_range=.,25389 NZ_CAJZAV010000008.1 Protein Homology CDS 25389 25536 . - 2 ID=cds-LDO49_RS37740;Parent=gene-LDO49_RS37740;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=25536,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012404635.1;locus_tag=LDO49_RS37740;partial=true;product=CheR family methyltransferase;pseudo=true;start_range=.,25389;transl_table=11 ##sequence-region NZ_CAJZAV010000009.1 1 14376 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000009.1 RefSeq region 1 14376 . + . ID=NZ_CAJZAV010000009.1:1..14376;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_106 NZ_CAJZAV010000009.1 RefSeq pseudogene 1 364 . + . ID=gene-LDO49_RS01725;Name=LDO49_RS01725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS01725;old_locus_tag=BCEP4_1060001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000009.1 Protein Homology CDS 1 364 . + 1 ID=cds-LDO49_RS01725;Parent=gene-LDO49_RS01725;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414312.1;locus_tag=LDO49_RS01725;partial=true;product=Na+/H+ antiporter;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000009.1 RefSeq gene 466 4038 . - . ID=gene-LDO49_RS01730;Name=LDO49_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01730;old_locus_tag=BCEP4_1060002 NZ_CAJZAV010000009.1 Protein Homology CDS 466 4038 . - 0 ID=cds-WP_060070177.1;Parent=gene-LDO49_RS01730;Dbxref=GenBank:WP_060070177.1;Name=WP_060070177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353392.1;locus_tag=LDO49_RS01730;product=indolepyruvate ferredoxin oxidoreductase family protein;protein_id=WP_060070177.1;transl_table=11 NZ_CAJZAV010000009.1 RefSeq gene 5266 5520 . + . ID=gene-LDO49_RS37745;Name=LDO49_RS37745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37745;partial=true;start_range=.,5266 NZ_CAJZAV010000009.1 GeneMarkS-2+ CDS 5266 5520 . + 0 ID=cds-WP_443797893.1;Parent=gene-LDO49_RS37745;Dbxref=GenBank:WP_443797893.1;Name=WP_443797893.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37745;partial=true;product=hypothetical protein;protein_id=WP_443797893.1;start_range=.,5266;transl_table=11 NZ_CAJZAV010000009.1 RefSeq gene 5955 6512 . - . ID=gene-LDO49_RS01735;Name=LDO49_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01735;old_locus_tag=BCEP4_1060004 NZ_CAJZAV010000009.1 Protein Homology CDS 5955 6512 . - 0 ID=cds-WP_059554328.1;Parent=gene-LDO49_RS01735;Dbxref=GenBank:WP_059554328.1;Name=WP_059554328.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895873.1;locus_tag=LDO49_RS01735;product=sugar O-acetyltransferase;protein_id=WP_059554328.1;transl_table=11 NZ_CAJZAV010000009.1 RefSeq gene 6889 7503 . + . ID=gene-LDO49_RS01740;Name=LDO49_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01740;old_locus_tag=BCEP4_1060005 NZ_CAJZAV010000009.1 Protein Homology CDS 6889 7503 . + 0 ID=cds-WP_027788983.1;Parent=gene-LDO49_RS01740;Dbxref=GenBank:WP_027788983.1;Name=WP_027788983.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484065.1;locus_tag=LDO49_RS01740;product=glutathione S-transferase family protein;protein_id=WP_027788983.1;transl_table=11 NZ_CAJZAV010000009.1 RefSeq gene 7547 8509 . - . ID=gene-LDO49_RS01745;Name=LDO49_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01745;old_locus_tag=BCEP4_1060006 NZ_CAJZAV010000009.1 Protein Homology CDS 7547 8509 . - 0 ID=cds-WP_059818182.1;Parent=gene-LDO49_RS01745;Dbxref=GenBank:WP_059818182.1;Name=WP_059818182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760584.1;locus_tag=LDO49_RS01745;product=ion channel;protein_id=WP_059818182.1;transl_table=11 NZ_CAJZAV010000009.1 RefSeq gene 8688 9707 . - . ID=gene-LDO49_RS01750;Name=LDO49_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01750;old_locus_tag=BCEP4_1060007 NZ_CAJZAV010000009.1 Protein Homology CDS 8688 9707 . - 0 ID=cds-WP_048026803.1;Parent=gene-LDO49_RS01750;Dbxref=GenBank:WP_048026803.1;Name=WP_048026803.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760583.1;locus_tag=LDO49_RS01750;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_048026803.1;transl_table=11 NZ_CAJZAV010000009.1 RefSeq gene 9869 10018 . + . ID=gene-LDO49_RS01755;Name=LDO49_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01755 NZ_CAJZAV010000009.1 GeneMarkS-2+ CDS 9869 10018 . + 0 ID=cds-WP_196486191.1;Parent=gene-LDO49_RS01755;Dbxref=GenBank:WP_196486191.1;Name=WP_196486191.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS01755;product=hypothetical protein;protein_id=WP_196486191.1;transl_table=11 NZ_CAJZAV010000009.1 RefSeq gene 10158 11051 . + . ID=gene-LDO49_RS01760;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=LDO49_RS01760;old_locus_tag=BCEP4_1060008 NZ_CAJZAV010000009.1 Protein Homology CDS 10158 11051 . + 0 ID=cds-WP_060070181.1;Parent=gene-LDO49_RS01760;Dbxref=GenBank:WP_060070181.1;Name=WP_060070181.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495455.1;locus_tag=LDO49_RS01760;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_060070181.1;transl_table=11 NZ_CAJZAV010000009.1 RefSeq gene 11108 11488 . - . ID=gene-LDO49_RS01765;Name=LDO49_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01765;old_locus_tag=BCEP4_1060009 NZ_CAJZAV010000009.1 Protein Homology CDS 11108 11488 . - 0 ID=cds-WP_042973416.1;Parent=gene-LDO49_RS01765;Dbxref=GenBank:WP_042973416.1;Name=WP_042973416.1;Ontology_term=GO:0004540,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA nuclease activity|0004540||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484069.1;locus_tag=LDO49_RS01765;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_042973416.1;transl_table=11 NZ_CAJZAV010000009.1 RefSeq gene 11488 11697 . - . ID=gene-LDO49_RS01770;Name=LDO49_RS01770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01770;old_locus_tag=BCEP4_1060011 NZ_CAJZAV010000009.1 Protein Homology CDS 11488 11697 . - 0 ID=cds-WP_021157429.1;Parent=gene-LDO49_RS01770;Dbxref=GenBank:WP_021157429.1;Name=WP_021157429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484075.1;locus_tag=LDO49_RS01770;product=hypothetical protein;protein_id=WP_021157429.1;transl_table=11 NZ_CAJZAV010000009.1 RefSeq gene 11813 12877 . - . ID=gene-LDO49_RS01775;Name=LDO49_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01775;old_locus_tag=BCEP4_1060012 NZ_CAJZAV010000009.1 Protein Homology CDS 11813 12877 . - 0 ID=cds-WP_060070184.1;Parent=gene-LDO49_RS01775;Dbxref=GenBank:WP_060070184.1;Name=WP_060070184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658080.1;locus_tag=LDO49_RS01775;product=LysR substrate-binding domain-containing protein;protein_id=WP_060070184.1;transl_table=11 NZ_CAJZAV010000009.1 RefSeq gene 12984 14354 . + . ID=gene-LDO49_RS01780;Name=LDO49_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01780;old_locus_tag=BCEP4_1060013 NZ_CAJZAV010000009.1 Protein Homology CDS 12984 14354 . + 0 ID=cds-WP_224051321.1;Parent=gene-LDO49_RS01780;Dbxref=GenBank:WP_224051321.1;Name=WP_224051321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329342.1;locus_tag=LDO49_RS01780;product=MFS transporter;protein_id=WP_224051321.1;transl_table=11 ##sequence-region NZ_CAJZAV010000010.1 1 3714 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000010.1 RefSeq region 1 3714 . + . ID=NZ_CAJZAV010000010.1:1..3714;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_107 NZ_CAJZAV010000010.1 RefSeq gene 263 667 . + . ID=gene-LDO49_RS01785;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=LDO49_RS01785;old_locus_tag=BCEP4_1070001 NZ_CAJZAV010000010.1 Protein Homology CDS 263 667 . + 0 ID=cds-WP_060071957.1;Parent=gene-LDO49_RS01785;Dbxref=GenBank:WP_060071957.1;Name=WP_060071957.1;Ontology_term=GO:0045893,GO:0046688,GO:0003677,GO:0003700,GO:0005507;gbkey=CDS;gene=cueR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,copper ion binding|0005507||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213024.1;locus_tag=LDO49_RS01785;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_060071957.1;transl_table=11 NZ_CAJZAV010000010.1 RefSeq gene 883 1029 . + . ID=gene-LDO49_RS01790;Name=LDO49_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01790;old_locus_tag=BCEP4_1070002 NZ_CAJZAV010000010.1 Protein Homology CDS 883 1029 . + 0 ID=cds-WP_006478295.1;Parent=gene-LDO49_RS01790;Dbxref=GenBank:WP_006478295.1;Name=WP_006478295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763866.1;locus_tag=LDO49_RS01790;product=DUF3563 family protein;protein_id=WP_006478295.1;transl_table=11 NZ_CAJZAV010000010.1 RefSeq gene 1144 1512 . + . ID=gene-LDO49_RS01795;Name=LDO49_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01795;old_locus_tag=BCEP4_1070003 NZ_CAJZAV010000010.1 Protein Homology CDS 1144 1512 . + 0 ID=cds-WP_175852001.1;Parent=gene-LDO49_RS01795;Dbxref=GenBank:WP_175852001.1;Name=WP_175852001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483871.1;locus_tag=LDO49_RS01795;product=hypothetical protein;protein_id=WP_175852001.1;transl_table=11 NZ_CAJZAV010000010.1 RefSeq gene 1528 2373 . - . ID=gene-LDO49_RS01800;Name=LDO49_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01800;old_locus_tag=BCEP4_1070004 NZ_CAJZAV010000010.1 Protein Homology CDS 1528 2373 . - 0 ID=cds-WP_021164367.1;Parent=gene-LDO49_RS01800;Dbxref=GenBank:WP_021164367.1;Name=WP_021164367.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755756.1;locus_tag=LDO49_RS01800;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_021164367.1;transl_table=11 NZ_CAJZAV010000010.1 RefSeq gene 2500 3471 . - . ID=gene-LDO49_RS01805;Name=LDO49_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01805;old_locus_tag=BCEP4_1070005 NZ_CAJZAV010000010.1 Protein Homology CDS 2500 3471 . - 0 ID=cds-WP_060071955.1;Parent=gene-LDO49_RS01805;Dbxref=GenBank:WP_060071955.1;Name=WP_060071955.1;Ontology_term=GO:0015459,GO:0016491,GO:0008076;gbkey=CDS;go_component=voltage-gated potassium channel complex|0008076||IEA;go_function=potassium channel regulator activity|0015459||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004535190.1;locus_tag=LDO49_RS01805;product=potassium channel beta subunit family protein;protein_id=WP_060071955.1;transl_table=11 NZ_CAJZAV010000010.1 RefSeq gene 3506 3714 . - . ID=gene-LDO49_RS01810;Name=LDO49_RS01810;end_range=3714,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01810;partial=true NZ_CAJZAV010000010.1 GeneMarkS-2+ CDS 3506 3714 . - 2 ID=cds-WP_224051322.1;Parent=gene-LDO49_RS01810;Dbxref=GenBank:WP_224051322.1;Name=WP_224051322.1;end_range=3714,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS01810;partial=true;product=hypothetical protein;protein_id=WP_224051322.1;transl_table=11 ##sequence-region NZ_CAJZAV010000011.1 1 37801 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000011.1 RefSeq region 1 37801 . + . ID=NZ_CAJZAV010000011.1:1..37801;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_108 NZ_CAJZAV010000011.1 RefSeq gene 1 732 . - . ID=gene-LDO49_RS01815;Name=LDO49_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01815;partial=true;start_range=.,1 NZ_CAJZAV010000011.1 Protein Homology CDS 1 732 . - 0 ID=cds-WP_224051323.1;Parent=gene-LDO49_RS01815;Dbxref=GenBank:WP_224051323.1;Name=WP_224051323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328857.1;locus_tag=LDO49_RS01815;partial=true;product=acetyltransferase;protein_id=WP_224051323.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 750 1541 . - . ID=gene-LDO49_RS01820;Name=LDO49_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01820;old_locus_tag=BCEP4_1080002 NZ_CAJZAV010000011.1 Protein Homology CDS 750 1541 . - 0 ID=cds-WP_021162436.1;Parent=gene-LDO49_RS01820;Dbxref=GenBank:WP_021162436.1;Name=WP_021162436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352620.1;locus_tag=LDO49_RS01820;product=SDR family oxidoreductase;protein_id=WP_021162436.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 1583 2776 . - . ID=gene-LDO49_RS01825;Name=LDO49_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01825;old_locus_tag=BCEP4_1080003 NZ_CAJZAV010000011.1 Protein Homology CDS 1583 2776 . - 0 ID=cds-WP_060070604.1;Parent=gene-LDO49_RS01825;Dbxref=GenBank:WP_060070604.1;Name=WP_060070604.1;Ontology_term=GO:0008146,GO:0050656,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sulfotransferase activity|0008146||IEA,3'-phosphoadenosine 5'-phosphosulfate binding|0050656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896567.1;locus_tag=LDO49_RS01825;product=sulfotransferase family protein;protein_id=WP_060070604.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 2773 3882 . - . ID=gene-LDO49_RS01830;Name=LDO49_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01830;old_locus_tag=BCEP4_1080004 NZ_CAJZAV010000011.1 Protein Homology CDS 2773 3882 . - 0 ID=cds-WP_060070606.1;Parent=gene-LDO49_RS01830;Dbxref=GenBank:WP_060070606.1;Name=WP_060070606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896566.1;locus_tag=LDO49_RS01830;product=DUF1214 domain-containing protein;protein_id=WP_060070606.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 3980 4960 . + . ID=gene-LDO49_RS01835;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=LDO49_RS01835;old_locus_tag=BCEP4_1080005 NZ_CAJZAV010000011.1 Protein Homology CDS 3980 4960 . + 0 ID=cds-WP_224051324.1;Parent=gene-LDO49_RS01835;Dbxref=GenBank:WP_224051324.1;Name=WP_224051324.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: protein motif:HMM:NF009214.0;locus_tag=LDO49_RS01835;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_224051324.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 4960 6873 . + . ID=gene-LDO49_RS01840;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=LDO49_RS01840;old_locus_tag=BCEP4_1080006 NZ_CAJZAV010000011.1 Protein Homology CDS 4960 6873 . + 0 ID=cds-WP_224051325.1;Parent=gene-LDO49_RS01840;Dbxref=GenBank:WP_224051325.1;Name=WP_224051325.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497782.1;locus_tag=LDO49_RS01840;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_224051325.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 7011 8198 . + . ID=gene-LDO49_RS01845;Name=LDO49_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01845;old_locus_tag=BCEP4_1080007 NZ_CAJZAV010000011.1 Protein Homology CDS 7011 8198 . + 0 ID=cds-WP_021162441.1;Parent=gene-LDO49_RS01845;Dbxref=GenBank:WP_021162441.1;Name=WP_021162441.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486068.1;locus_tag=LDO49_RS01845;product=helix-turn-helix transcriptional regulator;protein_id=WP_021162441.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 8455 9822 . + . ID=gene-LDO49_RS01850;Name=LDO49_RS01850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01850;old_locus_tag=BCEP4_1080008 NZ_CAJZAV010000011.1 Protein Homology CDS 8455 9822 . + 0 ID=cds-WP_111999086.1;Parent=gene-LDO49_RS01850;Dbxref=GenBank:WP_111999086.1;Name=WP_111999086.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549415.1;locus_tag=LDO49_RS01850;product=MFS transporter;protein_id=WP_111999086.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 9809 10858 . + . ID=gene-LDO49_RS01855;Name=LDO49_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01855;old_locus_tag=BCEP4_1080009 NZ_CAJZAV010000011.1 Protein Homology CDS 9809 10858 . + 0 ID=cds-WP_224051326.1;Parent=gene-LDO49_RS01855;Dbxref=GenBank:WP_224051326.1;Name=WP_224051326.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407949.1;locus_tag=LDO49_RS01855;product=lactonase family protein;protein_id=WP_224051326.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 10920 11957 . - . ID=gene-LDO49_RS01860;Name=LDO49_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01860;old_locus_tag=BCEP4_1080010 NZ_CAJZAV010000011.1 Protein Homology CDS 10920 11957 . - 0 ID=cds-WP_059486450.1;Parent=gene-LDO49_RS01860;Dbxref=GenBank:WP_059486450.1;Name=WP_059486450.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896560.1;locus_tag=LDO49_RS01860;product=AraC family transcriptional regulator;protein_id=WP_059486450.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 12162 13271 . + . ID=gene-LDO49_RS01865;Name=LDO49_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01865;old_locus_tag=BCEP4_1080011 NZ_CAJZAV010000011.1 Protein Homology CDS 12162 13271 . + 0 ID=cds-WP_224051327.1;Parent=gene-LDO49_RS01865;Dbxref=GenBank:WP_224051327.1;Name=WP_224051327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694329.1;locus_tag=LDO49_RS01865;product=fatty acid desaturase;protein_id=WP_224051327.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 13295 13915 . - . ID=gene-LDO49_RS01870;Name=LDO49_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01870;old_locus_tag=BCEP4_1080012 NZ_CAJZAV010000011.1 Protein Homology CDS 13295 13915 . - 0 ID=cds-WP_021162444.1;Parent=gene-LDO49_RS01870;Dbxref=GenBank:WP_021162444.1;Name=WP_021162444.1;Ontology_term=GO:0016311,GO:0016791,GO:0046872;gbkey=CDS;go_function=phosphatase activity|0016791||IEA,metal ion binding|0046872||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876326.1;locus_tag=LDO49_RS01870;product=HAD family hydrolase;protein_id=WP_021162444.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 14062 14931 . - . ID=gene-LDO49_RS01875;Name=LDO49_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01875;old_locus_tag=BCEP4_1080013 NZ_CAJZAV010000011.1 Protein Homology CDS 14062 14931 . - 0 ID=cds-WP_059619892.1;Parent=gene-LDO49_RS01875;Dbxref=GenBank:WP_059619892.1;Name=WP_059619892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497779.1;locus_tag=LDO49_RS01875;product=hypothetical protein;protein_id=WP_059619892.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 14983 15639 . - . ID=gene-LDO49_RS01880;Name=LDO49_RS01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01880;old_locus_tag=BCEP4_1080014 NZ_CAJZAV010000011.1 Protein Homology CDS 14983 15639 . - 0 ID=cds-WP_021163605.1;Parent=gene-LDO49_RS01880;Dbxref=GenBank:WP_021163605.1;Name=WP_021163605.1;Ontology_term=GO:0050896;gbkey=CDS;go_process=response to stimulus|0050896||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482759.1;locus_tag=LDO49_RS01880;product=TerD family protein;protein_id=WP_021163605.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 15734 16750 . - . ID=gene-LDO49_RS01885;Name=LDO49_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01885;old_locus_tag=BCEP4_1080015 NZ_CAJZAV010000011.1 Protein Homology CDS 15734 16750 . - 0 ID=cds-WP_021163606.1;Parent=gene-LDO49_RS01885;Dbxref=GenBank:WP_021163606.1;Name=WP_021163606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497778.1;locus_tag=LDO49_RS01885;product=DUF475 domain-containing protein;protein_id=WP_021163606.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 16797 17543 . - . ID=gene-LDO49_RS01890;Name=LDO49_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01890;old_locus_tag=BCEP4_1080016 NZ_CAJZAV010000011.1 Protein Homology CDS 16797 17543 . - 0 ID=cds-WP_224051328.1;Parent=gene-LDO49_RS01890;Dbxref=GenBank:WP_224051328.1;Name=WP_224051328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497777.1;locus_tag=LDO49_RS01890;product=VWA domain-containing protein;protein_id=WP_224051328.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 17564 18655 . - . ID=gene-LDO49_RS01895;Name=LDO49_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01895;old_locus_tag=BCEP4_1080017 NZ_CAJZAV010000011.1 Protein Homology CDS 17564 18655 . - 0 ID=cds-WP_059486459.1;Parent=gene-LDO49_RS01895;Dbxref=GenBank:WP_059486459.1;Name=WP_059486459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482744.1;locus_tag=LDO49_RS01895;product=toxic anion resistance protein;protein_id=WP_059486459.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 19009 19425 . - . ID=gene-LDO49_RS01900;Name=LDO49_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01900;old_locus_tag=BCEP4_1080018 NZ_CAJZAV010000011.1 Protein Homology CDS 19009 19425 . - 0 ID=cds-WP_224051329.1;Parent=gene-LDO49_RS01900;Dbxref=GenBank:WP_224051329.1;Name=WP_224051329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352641.1;locus_tag=LDO49_RS01900;product=hypothetical protein;protein_id=WP_224051329.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 19471 20100 . - . ID=gene-LDO49_RS01905;Name=LDO49_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01905;old_locus_tag=BCEP4_1080019 NZ_CAJZAV010000011.1 Protein Homology CDS 19471 20100 . - 0 ID=cds-WP_060070629.1;Parent=gene-LDO49_RS01905;Dbxref=GenBank:WP_060070629.1;Name=WP_060070629.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482752.1;locus_tag=LDO49_RS01905;product=LysE family translocator;protein_id=WP_060070629.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq pseudogene 20256 20445 . + . ID=gene-LDO49_RS01910;Name=LDO49_RS01910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS01910;old_locus_tag=BCEP4_1080020;partial=true;pseudo=true;start_range=.,20256 NZ_CAJZAV010000011.1 Protein Homology CDS 20256 20445 . + 0 ID=cds-LDO49_RS01910;Parent=gene-LDO49_RS01910;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402026.1;locus_tag=LDO49_RS01910;partial=true;product=hypothetical protein;pseudo=true;start_range=.,20256;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 20503 20593 . + . ID=gene-LDO49_RS01915;Name=LDO49_RS01915;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS01915;old_locus_tag=BCEP4_TRNA18 NZ_CAJZAV010000011.1 tRNAscan-SE tRNA 20503 20593 . + . ID=rna-LDO49_RS01915;Parent=gene-LDO49_RS01915;anticodon=(pos:20537..20539);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS01915;product=tRNA-Ser NZ_CAJZAV010000011.1 tRNAscan-SE exon 20503 20593 . + . ID=exon-LDO49_RS01915-1;Parent=rna-LDO49_RS01915;anticodon=(pos:20537..20539);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS01915;product=tRNA-Ser NZ_CAJZAV010000011.1 RefSeq gene 20882 21148 . - . ID=gene-LDO49_RS01920;Name=LDO49_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01920;old_locus_tag=BCEP4_1080022 NZ_CAJZAV010000011.1 GeneMarkS-2+ CDS 20882 21148 . - 0 ID=cds-WP_224051330.1;Parent=gene-LDO49_RS01920;Dbxref=GenBank:WP_224051330.1;Name=WP_224051330.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS01920;product=helix-turn-helix transcriptional regulator;protein_id=WP_224051330.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 21179 21385 . - . ID=gene-LDO49_RS01925;Name=LDO49_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01925;old_locus_tag=BCEP4_1080023 NZ_CAJZAV010000011.1 GeneMarkS-2+ CDS 21179 21385 . - 0 ID=cds-WP_224051332.1;Parent=gene-LDO49_RS01925;Dbxref=GenBank:WP_224051332.1;Name=WP_224051332.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS01925;product=hypothetical protein;protein_id=WP_224051332.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 21378 21581 . - . ID=gene-LDO49_RS01930;Name=LDO49_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01930;old_locus_tag=BCEP4_1080024 NZ_CAJZAV010000011.1 GeneMarkS-2+ CDS 21378 21581 . - 0 ID=cds-WP_224051334.1;Parent=gene-LDO49_RS01930;Dbxref=GenBank:WP_224051334.1;Name=WP_224051334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS01930;product=hypothetical protein;protein_id=WP_224051334.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 22023 22547 . + . ID=gene-LDO49_RS01935;Name=LDO49_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01935;old_locus_tag=BCEP4_1080025 NZ_CAJZAV010000011.1 Protein Homology CDS 22023 22547 . + 0 ID=cds-WP_224051336.1;Parent=gene-LDO49_RS01935;Dbxref=GenBank:WP_224051336.1;Name=WP_224051336.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF019442.6;locus_tag=LDO49_RS01935;product=excisionase;protein_id=WP_224051336.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 23071 23640 . + . ID=gene-LDO49_RS01940;Name=LDO49_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01940;old_locus_tag=BCEP4_1080026 NZ_CAJZAV010000011.1 Protein Homology CDS 23071 23640 . + 0 ID=cds-WP_224051337.1;Parent=gene-LDO49_RS01940;Dbxref=GenBank:WP_224051337.1;Name=WP_224051337.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011803290.1;locus_tag=LDO49_RS01940;product=recombinase family protein;protein_id=WP_224051337.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 23857 24060 . + . ID=gene-LDO49_RS01945;Name=LDO49_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01945;old_locus_tag=BCEP4_1080027 NZ_CAJZAV010000011.1 Protein Homology CDS 23857 24060 . + 0 ID=cds-WP_224051338.1;Parent=gene-LDO49_RS01945;Dbxref=GenBank:WP_224051338.1;Name=WP_224051338.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF017717.6;locus_tag=LDO49_RS01945;product=helix-turn-helix transcriptional regulator;protein_id=WP_224051338.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 24064 24351 . + . ID=gene-LDO49_RS01950;Name=LDO49_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01950;old_locus_tag=BCEP4_1080028 NZ_CAJZAV010000011.1 Protein Homology CDS 24064 24351 . + 0 ID=cds-WP_224051339.1;Parent=gene-LDO49_RS01950;Dbxref=GenBank:WP_224051339.1;Name=WP_224051339.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025456.6;locus_tag=LDO49_RS01950;product=helix-turn-helix domain-containing protein;protein_id=WP_224051339.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 24348 24527 . + . ID=gene-LDO49_RS01955;Name=LDO49_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01955;old_locus_tag=BCEP4_1080030 NZ_CAJZAV010000011.1 GeneMarkS-2+ CDS 24348 24527 . + 0 ID=cds-WP_224051340.1;Parent=gene-LDO49_RS01955;Dbxref=GenBank:WP_224051340.1;Name=WP_224051340.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS01955;product=hypothetical protein;protein_id=WP_224051340.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 24576 25358 . + . ID=gene-LDO49_RS01960;Name=LDO49_RS01960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01960;old_locus_tag=BCEP4_1080031 NZ_CAJZAV010000011.1 GeneMarkS-2+ CDS 24576 25358 . + 0 ID=cds-WP_224051341.1;Parent=gene-LDO49_RS01960;Dbxref=GenBank:WP_224051341.1;Name=WP_224051341.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS01960;product=hypothetical protein;protein_id=WP_224051341.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 25501 27402 . + . ID=gene-LDO49_RS01965;Name=LDO49_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01965;old_locus_tag=BCEP4_1080032 NZ_CAJZAV010000011.1 GeneMarkS-2+ CDS 25501 27402 . + 0 ID=cds-WP_224051342.1;Parent=gene-LDO49_RS01965;Dbxref=GenBank:WP_224051342.1;Name=WP_224051342.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS01965;product=hypothetical protein;protein_id=WP_224051342.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 27424 27765 . + . ID=gene-LDO49_RS01970;Name=LDO49_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01970;old_locus_tag=BCEP4_1080033 NZ_CAJZAV010000011.1 GeneMarkS-2+ CDS 27424 27765 . + 0 ID=cds-WP_224051344.1;Parent=gene-LDO49_RS01970;Dbxref=GenBank:WP_224051344.1;Name=WP_224051344.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS01970;product=hypothetical protein;protein_id=WP_224051344.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 27777 28175 . + . ID=gene-LDO49_RS01975;Name=LDO49_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01975;old_locus_tag=BCEP4_1080034 NZ_CAJZAV010000011.1 Protein Homology CDS 27777 28175 . + 0 ID=cds-WP_224051346.1;Parent=gene-LDO49_RS01975;Dbxref=GenBank:WP_224051346.1;Name=WP_224051346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683038.1;locus_tag=LDO49_RS01975;product=phage tail protein;protein_id=WP_224051346.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 28389 28559 . + . ID=gene-LDO49_RS37240;Name=LDO49_RS37240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37240 NZ_CAJZAV010000011.1 Protein Homology CDS 28389 28559 . + 0 ID=cds-WP_290369693.1;Parent=gene-LDO49_RS37240;Dbxref=GenBank:WP_290369693.1;Name=WP_290369693.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF041373.1;locus_tag=LDO49_RS37240;product=HGGxSTG domain-containing protein;protein_id=WP_290369693.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 29192 31225 . - . ID=gene-LDO49_RS01980;Name=LDO49_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01980;old_locus_tag=BCEP4_1080039 NZ_CAJZAV010000011.1 Protein Homology CDS 29192 31225 . - 0 ID=cds-WP_224051348.1;Parent=gene-LDO49_RS01980;Dbxref=GenBank:WP_224051348.1;Name=WP_224051348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015014534.1;locus_tag=LDO49_RS01980;product=AAA family ATPase;protein_id=WP_224051348.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 31235 31729 . - . ID=gene-LDO49_RS01985;Name=LDO49_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01985;old_locus_tag=BCEP4_1080040 NZ_CAJZAV010000011.1 Protein Homology CDS 31235 31729 . - 0 ID=cds-WP_224051350.1;Parent=gene-LDO49_RS01985;Dbxref=GenBank:WP_224051350.1;Name=WP_224051350.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF017717.6;locus_tag=LDO49_RS01985;product=helix-turn-helix transcriptional regulator;protein_id=WP_224051350.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 31814 32995 . - . ID=gene-LDO49_RS01990;Name=LDO49_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS01990;old_locus_tag=BCEP4_1080041 NZ_CAJZAV010000011.1 Protein Homology CDS 31814 32995 . - 0 ID=cds-WP_224051352.1;Parent=gene-LDO49_RS01990;Dbxref=GenBank:WP_224051352.1;Name=WP_224051352.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013123516.1;locus_tag=LDO49_RS01990;product=tyrosine-type recombinase/integrase;protein_id=WP_224051352.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 33862 34245 . - . ID=gene-LDO49_RS02000;Name=LDO49_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02000;old_locus_tag=BCEP4_1080043 NZ_CAJZAV010000011.1 Protein Homology CDS 33862 34245 . - 0 ID=cds-WP_443797894.1;Parent=gene-LDO49_RS02000;Dbxref=GenBank:WP_443797894.1;Name=WP_443797894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013339800.1;locus_tag=LDO49_RS02000;product=lysozyme inhibitor LprI family protein;protein_id=WP_443797894.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 34652 35254 . + . ID=gene-LDO49_RS02005;Name=LDO49_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02005;old_locus_tag=BCEP4_1080044 NZ_CAJZAV010000011.1 Protein Homology CDS 34652 35254 . + 0 ID=cds-WP_059551969.1;Parent=gene-LDO49_RS02005;Dbxref=GenBank:WP_059551969.1;Name=WP_059551969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549408.1;locus_tag=LDO49_RS02005;product=hypothetical protein;protein_id=WP_059551969.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 35318 37333 . - . ID=gene-LDO49_RS02010;Name=LDO49_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02010;old_locus_tag=BCEP4_1080045 NZ_CAJZAV010000011.1 Protein Homology CDS 35318 37333 . - 0 ID=cds-WP_059675864.1;Parent=gene-LDO49_RS02010;Dbxref=GenBank:WP_059675864.1;Name=WP_059675864.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187151.1;locus_tag=LDO49_RS02010;product=sodium:solute symporter family protein;protein_id=WP_059675864.1;transl_table=11 NZ_CAJZAV010000011.1 RefSeq gene 37337 37681 . - . ID=gene-LDO49_RS02015;Name=LDO49_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02015;old_locus_tag=BCEP4_1080046 NZ_CAJZAV010000011.1 Protein Homology CDS 37337 37681 . - 0 ID=cds-WP_060070631.1;Parent=gene-LDO49_RS02015;Dbxref=GenBank:WP_060070631.1;Name=WP_060070631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213036.1;locus_tag=LDO49_RS02015;product=DUF4212 domain-containing protein;protein_id=WP_060070631.1;transl_table=11 ##sequence-region NZ_CAJZAV010000012.1 1 20591 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000012.1 RefSeq region 1 20591 . + . ID=NZ_CAJZAV010000012.1:1..20591;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_109 NZ_CAJZAV010000012.1 RefSeq gene 1 632 . - . ID=gene-LDO49_RS02020;Name=LDO49_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02020;partial=true;start_range=.,1 NZ_CAJZAV010000012.1 Protein Homology CDS 1 632 . - 0 ID=cds-WP_224051356.1;Parent=gene-LDO49_RS02020;Dbxref=GenBank:WP_224051356.1;Name=WP_224051356.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896172.1;locus_tag=LDO49_RS02020;partial=true;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_224051356.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000012.1 RefSeq gene 644 1837 . - . ID=gene-LDO49_RS02025;Name=LDO49_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02025;old_locus_tag=BCEP4_1090002 NZ_CAJZAV010000012.1 Protein Homology CDS 644 1837 . - 0 ID=cds-WP_059485405.1;Parent=gene-LDO49_RS02025;Dbxref=GenBank:WP_059485405.1;Name=WP_059485405.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398412.1;locus_tag=LDO49_RS02025;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_059485405.1;transl_table=11 NZ_CAJZAV010000012.1 RefSeq gene 1928 2449 . - . ID=gene-LDO49_RS02030;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=LDO49_RS02030;old_locus_tag=BCEP4_1090003 NZ_CAJZAV010000012.1 Protein Homology CDS 1928 2449 . - 0 ID=cds-WP_021164114.1;Parent=gene-LDO49_RS02030;Dbxref=GenBank:WP_021164114.1;Name=WP_021164114.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481724.1;locus_tag=LDO49_RS02030;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_021164114.1;transl_table=11 NZ_CAJZAV010000012.1 RefSeq gene 2466 3356 . - . ID=gene-LDO49_RS02035;Name=LDO49_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02035;old_locus_tag=BCEP4_1090004 NZ_CAJZAV010000012.1 Protein Homology CDS 2466 3356 . - 0 ID=cds-WP_021164115.1;Parent=gene-LDO49_RS02035;Dbxref=GenBank:WP_021164115.1;Name=WP_021164115.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723567.1;locus_tag=LDO49_RS02035;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_021164115.1;transl_table=11 NZ_CAJZAV010000012.1 RefSeq gene 3590 4654 . - . ID=gene-LDO49_RS02040;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=LDO49_RS02040;old_locus_tag=BCEP4_1090005 NZ_CAJZAV010000012.1 Protein Homology CDS 3590 4654 . - 0 ID=cds-WP_021164116.1;Parent=gene-LDO49_RS02040;Dbxref=GenBank:WP_021164116.1;Name=WP_021164116.1;Note=catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle%2C glycolysis%2C and/or gluconeogenesis;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;gene=fba;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013589515.1;locus_tag=LDO49_RS02040;product=class II fructose-bisphosphate aldolase;protein_id=WP_021164116.1;transl_table=11 NZ_CAJZAV010000012.1 RefSeq gene 4971 6407 . - . ID=gene-LDO49_RS02045;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=LDO49_RS02045;old_locus_tag=BCEP4_1090006 NZ_CAJZAV010000012.1 Protein Homology CDS 4971 6407 . - 0 ID=cds-WP_021164117.1;Parent=gene-LDO49_RS02045;Dbxref=GenBank:WP_021164117.1;Name=WP_021164117.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188973.1;locus_tag=LDO49_RS02045;product=pyruvate kinase;protein_id=WP_021164117.1;transl_table=11 NZ_CAJZAV010000012.1 RefSeq gene 6406 6534 . + . ID=gene-LDO49_RS37245;Name=LDO49_RS37245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37245;old_locus_tag=BCEP4_1090007 NZ_CAJZAV010000012.1 GeneMarkS-2+ CDS 6406 6534 . + 0 ID=cds-WP_021164118.1;Parent=gene-LDO49_RS37245;Dbxref=GenBank:WP_021164118.1;Name=WP_021164118.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37245;product=hypothetical protein;protein_id=WP_021164118.1;transl_table=11 NZ_CAJZAV010000012.1 RefSeq gene 6692 7888 . - . ID=gene-LDO49_RS02050;Name=LDO49_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02050;old_locus_tag=BCEP4_1090008 NZ_CAJZAV010000012.1 Protein Homology CDS 6692 7888 . - 0 ID=cds-WP_059674716.1;Parent=gene-LDO49_RS02050;Dbxref=GenBank:WP_059674716.1;Name=WP_059674716.1;Ontology_term=GO:0006094,GO:0006096,GO:0000166,GO:0004618;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,phosphoglycerate kinase activity|0004618||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699247.1;locus_tag=LDO49_RS02050;product=phosphoglycerate kinase;protein_id=WP_059674716.1;transl_table=11 NZ_CAJZAV010000012.1 RefSeq gene 8169 8492 . - . ID=gene-LDO49_RS02055;Name=LDO49_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02055;old_locus_tag=BCEP4_1090009 NZ_CAJZAV010000012.1 Protein Homology CDS 8169 8492 . - 0 ID=cds-WP_021163740.1;Parent=gene-LDO49_RS02055;Dbxref=GenBank:WP_021163740.1;Name=WP_021163740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101895.1;locus_tag=LDO49_RS02055;product=AzlD domain-containing protein;protein_id=WP_021163740.1;transl_table=11 NZ_CAJZAV010000012.1 RefSeq gene 8489 9244 . - . ID=gene-LDO49_RS02060;Name=LDO49_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02060;old_locus_tag=BCEP4_1090010 NZ_CAJZAV010000012.1 Protein Homology CDS 8489 9244 . - 0 ID=cds-WP_042978151.1;Parent=gene-LDO49_RS02060;Dbxref=GenBank:WP_042978151.1;Name=WP_042978151.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364614.1;locus_tag=LDO49_RS02060;product=AzlC family ABC transporter permease;protein_id=WP_042978151.1;transl_table=11 NZ_CAJZAV010000012.1 RefSeq gene 9450 10373 . + . ID=gene-LDO49_RS02065;Name=LDO49_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02065;old_locus_tag=BCEP4_1090011 NZ_CAJZAV010000012.1 Protein Homology CDS 9450 10373 . + 0 ID=cds-WP_224051357.1;Parent=gene-LDO49_RS02065;Dbxref=GenBank:WP_224051357.1;Name=WP_224051357.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069237.1;locus_tag=LDO49_RS02065;product=branched-chain amino acid transaminase;protein_id=WP_224051357.1;transl_table=11 NZ_CAJZAV010000012.1 RefSeq gene 10426 10620 . + . ID=gene-LDO49_RS02070;Name=LDO49_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02070;old_locus_tag=BCEP4_1090012 NZ_CAJZAV010000012.1 Protein Homology CDS 10426 10620 . + 0 ID=cds-WP_006749970.1;Parent=gene-LDO49_RS02070;Dbxref=GenBank:WP_006749970.1;Name=WP_006749970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180502.1;locus_tag=LDO49_RS02070;product=zinc-finger domain-containing protein;protein_id=WP_006749970.1;transl_table=11 NZ_CAJZAV010000012.1 RefSeq gene 10767 11804 . + . ID=gene-LDO49_RS02075;Name=waaF;gbkey=Gene;gene=waaF;gene_biotype=protein_coding;locus_tag=LDO49_RS02075;old_locus_tag=BCEP4_1090013 NZ_CAJZAV010000012.1 Protein Homology CDS 10767 11804 . + 0 ID=cds-WP_027785312.1;Parent=gene-LDO49_RS02075;Dbxref=GenBank:WP_027785312.1;Name=WP_027785312.1;Ontology_term=GO:0009103,GO:0008920,GO:0016757;gbkey=CDS;gene=waaF;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA,glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011401829.1;locus_tag=LDO49_RS02075;product=lipopolysaccharide heptosyltransferase II;protein_id=WP_027785312.1;transl_table=11 NZ_CAJZAV010000012.1 RefSeq gene 11920 12366 . + . ID=gene-LDO49_RS02080;Name=LDO49_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02080;old_locus_tag=BCEP4_1090014 NZ_CAJZAV010000012.1 Protein Homology CDS 11920 12366 . + 0 ID=cds-WP_006749968.1;Parent=gene-LDO49_RS02080;Dbxref=GenBank:WP_006749968.1;Name=WP_006749968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090801.1;locus_tag=LDO49_RS02080;product=nuclear transport factor 2 family protein;protein_id=WP_006749968.1;transl_table=11 NZ_CAJZAV010000012.1 RefSeq gene 12400 13437 . + . ID=gene-LDO49_RS02085;Name=LDO49_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02085;old_locus_tag=BCEP4_1090015 NZ_CAJZAV010000012.1 Protein Homology CDS 12400 13437 . + 0 ID=cds-WP_021163738.1;Parent=gene-LDO49_RS02085;Dbxref=GenBank:WP_021163738.1;Name=WP_021163738.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189905.1;locus_tag=LDO49_RS02085;product=hydrolase;protein_id=WP_021163738.1;transl_table=11 NZ_CAJZAV010000012.1 RefSeq gene 13430 14017 . + . ID=gene-LDO49_RS02090;Name=LDO49_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02090;old_locus_tag=BCEP4_1090016 NZ_CAJZAV010000012.1 Protein Homology CDS 13430 14017 . + 0 ID=cds-WP_060069784.1;Parent=gene-LDO49_RS02090;Dbxref=GenBank:WP_060069784.1;Name=WP_060069784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885916.1;locus_tag=LDO49_RS02090;product=DUF2946 family protein;protein_id=WP_060069784.1;transl_table=11 NZ_CAJZAV010000012.1 RefSeq gene 14057 15751 . - . ID=gene-LDO49_RS02095;Name=LDO49_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02095;old_locus_tag=BCEP4_1090017 NZ_CAJZAV010000012.1 Protein Homology CDS 14057 15751 . - 0 ID=cds-WP_124844109.1;Parent=gene-LDO49_RS02095;Dbxref=GenBank:WP_124844109.1;Name=WP_124844109.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723571.1;locus_tag=LDO49_RS02095;product=M48 family metalloprotease;protein_id=WP_124844109.1;transl_table=11 NZ_CAJZAV010000012.1 RefSeq gene 16025 16513 . + . ID=gene-LDO49_RS02100;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=LDO49_RS02100;old_locus_tag=BCEP4_1090018 NZ_CAJZAV010000012.1 Protein Homology CDS 16025 16513 . + 0 ID=cds-WP_021160201.1;Parent=gene-LDO49_RS02100;Dbxref=GenBank:WP_021160201.1;Name=WP_021160201.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885918.1;locus_tag=LDO49_RS02100;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_021160201.1;transl_table=11 NZ_CAJZAV010000012.1 RefSeq gene 16604 17809 . + . ID=gene-LDO49_RS02105;Name=LDO49_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02105;old_locus_tag=BCEP4_1090019 NZ_CAJZAV010000012.1 Protein Homology CDS 16604 17809 . + 0 ID=cds-WP_060069789.1;Parent=gene-LDO49_RS02105;Dbxref=GenBank:WP_060069789.1;Name=WP_060069789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353078.1;locus_tag=LDO49_RS02105;product=hypothetical protein;protein_id=WP_060069789.1;transl_table=11 NZ_CAJZAV010000012.1 RefSeq gene 17931 18281 . - . ID=gene-LDO49_RS02110;Name=LDO49_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02110;old_locus_tag=BCEP4_1090020 NZ_CAJZAV010000012.1 Protein Homology CDS 17931 18281 . - 0 ID=cds-WP_048025009.1;Parent=gene-LDO49_RS02110;Dbxref=GenBank:WP_048025009.1;Name=WP_048025009.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482365.1;locus_tag=LDO49_RS02110;product=TonB family protein;protein_id=WP_048025009.1;transl_table=11 NZ_CAJZAV010000012.1 RefSeq pseudogene 18734 20495 . - . ID=gene-LDO49_RS02115;Name=LDO49_RS02115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS02115;old_locus_tag=BCEP4_1090021;pseudo=true NZ_CAJZAV010000012.1 Protein Homology CDS 18734 20495 . - 0 ID=cds-LDO49_RS02115;Parent=gene-LDO49_RS02115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546120.1;locus_tag=LDO49_RS02115;product=PglL family O-oligosaccharyltransferase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000013.1 1 31563 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000013.1 RefSeq region 1 31563 . + . ID=NZ_CAJZAV010000013.1:1..31563;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_11 NZ_CAJZAV010000013.1 RefSeq gene 1 1878 . - . ID=gene-LDO49_RS02120;Name=LDO49_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02120;partial=true;start_range=.,1 NZ_CAJZAV010000013.1 Protein Homology CDS 1 1878 . - 0 ID=cds-WP_224051358.1;Parent=gene-LDO49_RS02120;Dbxref=GenBank:WP_224051358.1;Name=WP_224051358.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355193.1;locus_tag=LDO49_RS02120;partial=true;product=serine/threonine protein kinase;protein_id=WP_224051358.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 1954 2652 . - . ID=gene-LDO49_RS02125;Name=tagF;gbkey=Gene;gene=tagF;gene_biotype=protein_coding;locus_tag=LDO49_RS02125;old_locus_tag=BCEP4_110002 NZ_CAJZAV010000013.1 Protein Homology CDS 1954 2652 . - 0 ID=cds-WP_104768556.1;Parent=gene-LDO49_RS02125;Dbxref=GenBank:WP_104768556.1;Name=WP_104768556.1;gbkey=CDS;gene=tagF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899371.1;locus_tag=LDO49_RS02125;product=type VI secretion system-associated protein TagF;protein_id=WP_104768556.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 2634 6263 . - . ID=gene-LDO49_RS02130;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=LDO49_RS02130;old_locus_tag=BCEP4_110003 NZ_CAJZAV010000013.1 Protein Homology CDS 2634 6263 . - 0 ID=cds-WP_060071853.1;Parent=gene-LDO49_RS02130;Dbxref=GenBank:WP_060071853.1;Name=WP_060071853.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355195.1;locus_tag=LDO49_RS02130;product=type VI secretion system membrane subunit TssM;protein_id=WP_060071853.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 6265 7587 . - . ID=gene-LDO49_RS02135;Name=LDO49_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02135;old_locus_tag=BCEP4_110004 NZ_CAJZAV010000013.1 Protein Homology CDS 6265 7587 . - 0 ID=cds-WP_059484913.1;Parent=gene-LDO49_RS02135;Dbxref=GenBank:WP_059484913.1;Name=WP_059484913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355196.1;locus_tag=LDO49_RS02135;product=DotU family type VI secretion system protein;protein_id=WP_059484913.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 7603 9009 . - . ID=gene-LDO49_RS02140;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LDO49_RS02140;old_locus_tag=BCEP4_110005 NZ_CAJZAV010000013.1 Protein Homology CDS 7603 9009 . - 0 ID=cds-WP_060071851.1;Parent=gene-LDO49_RS02140;Dbxref=GenBank:WP_060071851.1;Name=WP_060071851.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533421.1;locus_tag=LDO49_RS02140;product=type VI secretion system baseplate subunit TssK;protein_id=WP_060071851.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 9006 9521 . - . ID=gene-LDO49_RS02145;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LDO49_RS02145;old_locus_tag=BCEP4_110006 NZ_CAJZAV010000013.1 Protein Homology CDS 9006 9521 . - 0 ID=cds-WP_042977289.1;Parent=gene-LDO49_RS02145;Dbxref=GenBank:WP_042977289.1;Name=WP_042977289.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010117757.1;locus_tag=LDO49_RS02145;product=type VI secretion system lipoprotein TssJ;protein_id=WP_042977289.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 10153 10539 . + . ID=gene-LDO49_RS02150;Name=LDO49_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02150;old_locus_tag=BCEP4_110009 NZ_CAJZAV010000013.1 Protein Homology CDS 10153 10539 . + 0 ID=cds-WP_021162715.1;Parent=gene-LDO49_RS02150;Dbxref=GenBank:WP_021162715.1;Name=WP_021162715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009907141.1;locus_tag=LDO49_RS02150;product=TssQ family T6SS-associated lipoprotein;protein_id=WP_021162715.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 10584 12023 . + . ID=gene-LDO49_RS02155;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=LDO49_RS02155;old_locus_tag=BCEP4_110010 NZ_CAJZAV010000013.1 Protein Homology CDS 10584 12023 . + 0 ID=cds-WP_060071849.1;Parent=gene-LDO49_RS02155;Dbxref=GenBank:WP_060071849.1;Name=WP_060071849.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tagH;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853858.1;locus_tag=LDO49_RS02155;product=type VI secretion system-associated FHA domain protein TagH;protein_id=WP_060071849.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 12078 13556 . - . ID=gene-LDO49_RS02160;Name=LDO49_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02160;old_locus_tag=BCEP4_110011 NZ_CAJZAV010000013.1 Protein Homology CDS 12078 13556 . - 0 ID=cds-WP_060071847.1;Parent=gene-LDO49_RS02160;Dbxref=GenBank:WP_060071847.1;Name=WP_060071847.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016347509.1;locus_tag=LDO49_RS02160;product=sensor domain-containing diguanylate cyclase;protein_id=WP_060071847.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 13982 15427 . - . ID=gene-LDO49_RS02165;Name=LDO49_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02165;old_locus_tag=BCEP4_110013 NZ_CAJZAV010000013.1 Protein Homology CDS 13982 15427 . - 0 ID=cds-WP_059552233.1;Parent=gene-LDO49_RS02165;Dbxref=GenBank:WP_059552233.1;Name=WP_059552233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397042.1;locus_tag=LDO49_RS02165;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_059552233.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 15580 16878 . - . ID=gene-LDO49_RS02170;Name=LDO49_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02170;old_locus_tag=BCEP4_110014 NZ_CAJZAV010000013.1 Protein Homology CDS 15580 16878 . - 0 ID=cds-WP_059492233.1;Parent=gene-LDO49_RS02170;Dbxref=GenBank:WP_059492233.1;Name=WP_059492233.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494850.1;locus_tag=LDO49_RS02170;product=c-type cytochrome;protein_id=WP_059492233.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 16894 19128 . - . ID=gene-LDO49_RS02175;Name=LDO49_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02175;old_locus_tag=BCEP4_110015 NZ_CAJZAV010000013.1 Protein Homology CDS 16894 19128 . - 0 ID=cds-WP_059552237.1;Parent=gene-LDO49_RS02175;Dbxref=GenBank:WP_059552237.1;Name=WP_059552237.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899380.1;locus_tag=LDO49_RS02175;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=WP_059552237.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 19130 19585 . - . ID=gene-LDO49_RS02180;Name=LDO49_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02180;old_locus_tag=BCEP4_110016 NZ_CAJZAV010000013.1 Protein Homology CDS 19130 19585 . - 0 ID=cds-WP_021162722.1;Parent=gene-LDO49_RS02180;Dbxref=GenBank:WP_021162722.1;Name=WP_021162722.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329294.1;locus_tag=LDO49_RS02180;product=(2Fe-2S)-binding protein;protein_id=WP_021162722.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 19733 20032 . - . ID=gene-LDO49_RS02185;Name=LDO49_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02185;old_locus_tag=BCEP4_110017 NZ_CAJZAV010000013.1 Protein Homology CDS 19733 20032 . - 0 ID=cds-WP_021162723.1;Parent=gene-LDO49_RS02185;Dbxref=GenBank:WP_021162723.1;Name=WP_021162723.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479020.1;locus_tag=LDO49_RS02185;product=putative quinol monooxygenase;protein_id=WP_021162723.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 20126 21184 . - . ID=gene-LDO49_RS02190;Name=LDO49_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02190;old_locus_tag=BCEP4_110018 NZ_CAJZAV010000013.1 Protein Homology CDS 20126 21184 . - 0 ID=cds-WP_021162724.1;Parent=gene-LDO49_RS02190;Dbxref=GenBank:WP_021162724.1;Name=WP_021162724.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479021.1;locus_tag=LDO49_RS02190;product=NADP-dependent oxidoreductase;protein_id=WP_021162724.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 21419 22039 . - . ID=gene-LDO49_RS02195;Name=LDO49_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02195;old_locus_tag=BCEP4_110019 NZ_CAJZAV010000013.1 Protein Homology CDS 21419 22039 . - 0 ID=cds-WP_060071844.1;Parent=gene-LDO49_RS02195;Dbxref=GenBank:WP_060071844.1;Name=WP_060071844.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479022.1;locus_tag=LDO49_RS02195;product=TetR/AcrR family transcriptional regulator;protein_id=WP_060071844.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 22349 23920 . + . ID=gene-LDO49_RS02200;Name=LDO49_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02200;old_locus_tag=BCEP4_110020 NZ_CAJZAV010000013.1 Protein Homology CDS 22349 23920 . + 0 ID=cds-WP_224051360.1;Parent=gene-LDO49_RS02200;Dbxref=GenBank:WP_224051360.1;Name=WP_224051360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493338.1;locus_tag=LDO49_RS02200;product=hypothetical protein;protein_id=WP_224051360.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 24040 25059 . - . ID=gene-LDO49_RS02205;Name=LDO49_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02205;old_locus_tag=BCEP4_110022 NZ_CAJZAV010000013.1 Protein Homology CDS 24040 25059 . - 0 ID=cds-WP_060071842.1;Parent=gene-LDO49_RS02205;Dbxref=GenBank:WP_060071842.1;Name=WP_060071842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547696.1;locus_tag=LDO49_RS02205;product=DNA-binding protein;protein_id=WP_060071842.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 25234 26580 . - . ID=gene-LDO49_RS02210;Name=LDO49_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02210;old_locus_tag=BCEP4_110023 NZ_CAJZAV010000013.1 Protein Homology CDS 25234 26580 . - 0 ID=cds-WP_224051362.1;Parent=gene-LDO49_RS02210;Dbxref=GenBank:WP_224051362.1;Name=WP_224051362.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753230.1;locus_tag=LDO49_RS02210;product=aminotransferase-like domain-containing protein;protein_id=WP_224051362.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 26714 27118 . + . ID=gene-LDO49_RS02215;Name=LDO49_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02215;old_locus_tag=BCEP4_110024 NZ_CAJZAV010000013.1 Protein Homology CDS 26714 27118 . + 0 ID=cds-WP_027791597.1;Parent=gene-LDO49_RS02215;Dbxref=GenBank:WP_027791597.1;Name=WP_027791597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549562.1;locus_tag=LDO49_RS02215;product=VOC family protein;protein_id=WP_027791597.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 27154 27783 . + . ID=gene-LDO49_RS02220;Name=LDO49_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02220;old_locus_tag=BCEP4_110025 NZ_CAJZAV010000013.1 Protein Homology CDS 27154 27783 . + 0 ID=cds-WP_042977299.1;Parent=gene-LDO49_RS02220;Dbxref=GenBank:WP_042977299.1;Name=WP_042977299.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753228.1;locus_tag=LDO49_RS02220;product=LysE family translocator;protein_id=WP_042977299.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 27836 28681 . + . ID=gene-LDO49_RS02225;Name=LDO49_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02225;old_locus_tag=BCEP4_110026 NZ_CAJZAV010000013.1 Protein Homology CDS 27836 28681 . + 0 ID=cds-WP_060071839.1;Parent=gene-LDO49_RS02225;Dbxref=GenBank:WP_060071839.1;Name=WP_060071839.1;Ontology_term=GO:0009058,GO:0016853,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isomerase activity|0016853||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549560.1;locus_tag=LDO49_RS02225;product=PhzF family phenazine biosynthesis protein;protein_id=WP_060071839.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 28883 29548 . + . ID=gene-LDO49_RS02230;Name=LDO49_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02230;old_locus_tag=BCEP4_110027 NZ_CAJZAV010000013.1 Protein Homology CDS 28883 29548 . + 0 ID=cds-WP_059492241.1;Parent=gene-LDO49_RS02230;Dbxref=GenBank:WP_059492241.1;Name=WP_059492241.1;Ontology_term=GO:0006812,GO:0008324,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,efflux transmembrane transporter activity|0015562||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340023.1;locus_tag=LDO49_RS02230;product=cation diffusion facilitator family transporter;protein_id=WP_059492241.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 29742 30932 . - . ID=gene-LDO49_RS02235;Name=LDO49_RS02235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02235;old_locus_tag=BCEP4_110028 NZ_CAJZAV010000013.1 Protein Homology CDS 29742 30932 . - 0 ID=cds-WP_021162732.1;Parent=gene-LDO49_RS02235;Dbxref=GenBank:WP_021162732.1;Name=WP_021162732.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493335.1;locus_tag=LDO49_RS02235;product=helix-turn-helix transcriptional regulator;protein_id=WP_021162732.1;transl_table=11 NZ_CAJZAV010000013.1 RefSeq gene 31214 31563 . + . ID=gene-LDO49_RS02240;Name=LDO49_RS02240;end_range=31563,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02240;partial=true NZ_CAJZAV010000013.1 Protein Homology CDS 31214 31563 . + 0 ID=cds-WP_224051363.1;Parent=gene-LDO49_RS02240;Dbxref=GenBank:WP_224051363.1;Name=WP_224051363.1;Ontology_term=GO:0016787;end_range=31563,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494861.1;locus_tag=LDO49_RS02240;partial=true;product=alpha/beta hydrolase fold domain-containing protein;protein_id=WP_224051363.1;transl_table=11 ##sequence-region NZ_CAJZAV010000014.1 1 11058 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000014.1 RefSeq region 1 11058 . + . ID=NZ_CAJZAV010000014.1:1..11058;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_110 NZ_CAJZAV010000014.1 RefSeq gene 1 565 . + . ID=gene-LDO49_RS02245;Name=LDO49_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02245;old_locus_tag=BCEP4_1100001;partial=true;start_range=.,1 NZ_CAJZAV010000014.1 Protein Homology CDS 1 565 . + 1 ID=cds-WP_224051364.1;Parent=gene-LDO49_RS02245;Dbxref=GenBank:WP_224051364.1;Name=WP_224051364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115024.1;locus_tag=LDO49_RS02245;partial=true;product=lipoyl synthase;protein_id=WP_224051364.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000014.1 RefSeq gene 577 1932 . - . ID=gene-LDO49_RS02250;Name=LDO49_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02250;old_locus_tag=BCEP4_1100002 NZ_CAJZAV010000014.1 Protein Homology CDS 577 1932 . - 0 ID=cds-WP_060073105.1;Parent=gene-LDO49_RS02250;Dbxref=GenBank:WP_060073105.1;Name=WP_060073105.1;Ontology_term=GO:0006855,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485071.1;locus_tag=LDO49_RS02250;product=MATE family efflux transporter;protein_id=WP_060073105.1;transl_table=11 NZ_CAJZAV010000014.1 RefSeq gene 1935 3767 . - . ID=gene-LDO49_RS02255;Name=LDO49_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02255;old_locus_tag=BCEP4_1100003 NZ_CAJZAV010000014.1 Protein Homology CDS 1935 3767 . - 0 ID=cds-WP_124474983.1;Parent=gene-LDO49_RS02255;Dbxref=GenBank:WP_124474983.1;Name=WP_124474983.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485070.1;locus_tag=LDO49_RS02255;product=ArnT family glycosyltransferase;protein_id=WP_124474983.1;transl_table=11 NZ_CAJZAV010000014.1 RefSeq gene 3912 4172 . - . ID=gene-LDO49_RS02260;Name=LDO49_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02260;old_locus_tag=BCEP4_1100005 NZ_CAJZAV010000014.1 Protein Homology CDS 3912 4172 . - 0 ID=cds-WP_021156486.1;Parent=gene-LDO49_RS02260;Dbxref=GenBank:WP_021156486.1;Name=WP_021156486.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485080.1;locus_tag=LDO49_RS02260;product=type B 50S ribosomal protein L31;protein_id=WP_021156486.1;transl_table=11 NZ_CAJZAV010000014.1 RefSeq gene 4330 5163 . - . ID=gene-LDO49_RS02265;Name=LDO49_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02265;old_locus_tag=BCEP4_1100006 NZ_CAJZAV010000014.1 Protein Homology CDS 4330 5163 . - 0 ID=cds-WP_060073107.1;Parent=gene-LDO49_RS02265;Dbxref=GenBank:WP_060073107.1;Name=WP_060073107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496402.1;locus_tag=LDO49_RS02265;product=zinc-dependent peptidase;protein_id=WP_060073107.1;transl_table=11 NZ_CAJZAV010000014.1 RefSeq gene 5202 6758 . - . ID=gene-LDO49_RS02270;Name=LDO49_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02270;old_locus_tag=BCEP4_1100007 NZ_CAJZAV010000014.1 Protein Homology CDS 5202 6758 . - 0 ID=cds-WP_059587882.1;Parent=gene-LDO49_RS02270;Dbxref=GenBank:WP_059587882.1;Name=WP_059587882.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255169.1;locus_tag=LDO49_RS02270;product=MFS transporter;protein_id=WP_059587882.1;transl_table=11 NZ_CAJZAV010000014.1 RefSeq gene 6755 7255 . - . ID=gene-LDO49_RS02275;Name=LDO49_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02275;old_locus_tag=BCEP4_1100008 NZ_CAJZAV010000014.1 Protein Homology CDS 6755 7255 . - 0 ID=cds-WP_060073109.1;Parent=gene-LDO49_RS02275;Dbxref=GenBank:WP_060073109.1;Name=WP_060073109.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328636.1;locus_tag=LDO49_RS02275;product=MerR family transcriptional regulator;protein_id=WP_060073109.1;transl_table=11 NZ_CAJZAV010000014.1 RefSeq gene 7393 8655 . - . ID=gene-LDO49_RS02280;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=LDO49_RS02280;old_locus_tag=BCEP4_1100009 NZ_CAJZAV010000014.1 Protein Homology CDS 7393 8655 . - 0 ID=cds-WP_006478662.1;Parent=gene-LDO49_RS02280;Dbxref=GenBank:WP_006478662.1;Name=WP_006478662.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013435079.1;locus_tag=LDO49_RS02280;product=transcription termination factor Rho;protein_id=WP_006478662.1;transl_table=11 NZ_CAJZAV010000014.1 RefSeq gene 8849 9175 . - . ID=gene-LDO49_RS02285;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LDO49_RS02285;old_locus_tag=BCEP4_1100010 NZ_CAJZAV010000014.1 Protein Homology CDS 8849 9175 . - 0 ID=cds-WP_006402348.1;Parent=gene-LDO49_RS02285;Dbxref=GenBank:WP_006402348.1;Name=WP_006402348.1;Ontology_term=GO:0045454,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026981.1;locus_tag=LDO49_RS02285;product=thioredoxin TrxA;protein_id=WP_006402348.1;transl_table=11 NZ_CAJZAV010000014.1 RefSeq gene 9576 9674 . + . ID=gene-LDO49_RS02290;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=LDO49_RS02290;old_locus_tag=BCEP4_MISCRNA41 NZ_CAJZAV010000014.1 cmsearch SRP_RNA 9576 9674 . + . ID=rna-LDO49_RS02290;Parent=gene-LDO49_RS02290;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO49_RS02290;product=signal recognition particle sRNA small type NZ_CAJZAV010000014.1 cmsearch exon 9576 9674 . + . ID=exon-LDO49_RS02290-1;Parent=rna-LDO49_RS02290;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO49_RS02290;product=signal recognition particle sRNA small type NZ_CAJZAV010000014.1 RefSeq gene 9802 10872 . + . ID=gene-LDO49_RS02295;Name=dnaX;end_range=10872,.;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=LDO49_RS02295;old_locus_tag=BCEP4_1100011;partial=true NZ_CAJZAV010000014.1 Protein Homology CDS 9802 10872 . + 0 ID=cds-WP_443797895.1;Parent=gene-LDO49_RS02295;Dbxref=GenBank:WP_443797895.1;Name=WP_443797895.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;end_range=10872,.;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555884.1;locus_tag=LDO49_RS02295;partial=true;product=DNA polymerase III subunit gamma/tau;protein_id=WP_443797895.1;transl_table=11 ##sequence-region NZ_CAJZAV010000015.1 1 63060 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000015.1 RefSeq region 1 63060 . + . ID=NZ_CAJZAV010000015.1:1..63060;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_111 NZ_CAJZAV010000015.1 RefSeq gene 47 991 . - . ID=gene-LDO49_RS02300;Name=LDO49_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02300;old_locus_tag=BCEP4_1110001 NZ_CAJZAV010000015.1 Protein Homology CDS 47 991 . - 0 ID=cds-WP_059485084.1;Parent=gene-LDO49_RS02300;Dbxref=GenBank:WP_059485084.1;Name=WP_059485084.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338329.1;locus_tag=LDO49_RS02300;product=LysR family transcriptional regulator;protein_id=WP_059485084.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 1155 2198 . + . ID=gene-LDO49_RS02305;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=LDO49_RS02305;old_locus_tag=BCEP4_1110002 NZ_CAJZAV010000015.1 Protein Homology CDS 1155 2198 . + 0 ID=cds-WP_048021763.1;Parent=gene-LDO49_RS02305;Dbxref=GenBank:WP_048021763.1;Name=WP_048021763.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488719.1;locus_tag=LDO49_RS02305;product=gentisate 1%2C2-dioxygenase;protein_id=WP_048021763.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 2275 2973 . + . ID=gene-LDO49_RS02310;Name=LDO49_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02310;old_locus_tag=BCEP4_1110003 NZ_CAJZAV010000015.1 Protein Homology CDS 2275 2973 . + 0 ID=cds-WP_224051365.1;Parent=gene-LDO49_RS02310;Dbxref=GenBank:WP_224051365.1;Name=WP_224051365.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411788.1;locus_tag=LDO49_RS02310;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_224051365.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 2999 3640 . + . ID=gene-LDO49_RS02315;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=LDO49_RS02315;old_locus_tag=BCEP4_1110004 NZ_CAJZAV010000015.1 Protein Homology CDS 2999 3640 . + 0 ID=cds-WP_224051366.1;Parent=gene-LDO49_RS02315;Dbxref=GenBank:WP_224051366.1;Name=WP_224051366.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,L-tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338326.1;locus_tag=LDO49_RS02315;product=maleylacetoacetate isomerase;protein_id=WP_224051366.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 3660 4868 . + . ID=gene-LDO49_RS02320;Name=LDO49_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02320;old_locus_tag=BCEP4_1110005 NZ_CAJZAV010000015.1 Protein Homology CDS 3660 4868 . + 0 ID=cds-WP_224051367.1;Parent=gene-LDO49_RS02320;Dbxref=GenBank:WP_224051367.1;Name=WP_224051367.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488721.1;locus_tag=LDO49_RS02320;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WP_224051367.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 4949 6310 . + . ID=gene-LDO49_RS02325;Name=LDO49_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02325;old_locus_tag=BCEP4_1110006 NZ_CAJZAV010000015.1 Protein Homology CDS 4949 6310 . + 0 ID=cds-WP_175895790.1;Parent=gene-LDO49_RS02325;Dbxref=GenBank:WP_175895790.1;Name=WP_175895790.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338324.1;locus_tag=LDO49_RS02325;product=MFS transporter;protein_id=WP_175895790.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 6407 6757 . + . ID=gene-LDO49_RS02330;Name=LDO49_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02330;old_locus_tag=BCEP4_1110007 NZ_CAJZAV010000015.1 Protein Homology CDS 6407 6757 . + 0 ID=cds-WP_224051368.1;Parent=gene-LDO49_RS02330;Dbxref=GenBank:WP_224051368.1;Name=WP_224051368.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365849.1;locus_tag=LDO49_RS02330;product=ArsR/SmtB family transcription factor;protein_id=WP_224051368.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 6747 7181 . + . ID=gene-LDO49_RS02335;Name=LDO49_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02335;old_locus_tag=BCEP4_1110008 NZ_CAJZAV010000015.1 Protein Homology CDS 6747 7181 . + 0 ID=cds-WP_224051369.1;Parent=gene-LDO49_RS02335;Dbxref=GenBank:WP_224051369.1;Name=WP_224051369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524275.1;locus_tag=LDO49_RS02335;product=YeeE/YedE family protein;protein_id=WP_224051369.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 7183 7605 . + . ID=gene-LDO49_RS02340;Name=LDO49_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02340;old_locus_tag=BCEP4_1110009 NZ_CAJZAV010000015.1 Protein Homology CDS 7183 7605 . + 0 ID=cds-WP_224051370.1;Parent=gene-LDO49_RS02340;Dbxref=GenBank:WP_224051370.1;Name=WP_224051370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488715.1;locus_tag=LDO49_RS02340;product=DUF6691 family protein;protein_id=WP_224051370.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 7767 8117 . - . ID=gene-LDO49_RS02345;Name=LDO49_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02345;old_locus_tag=BCEP4_1110010 NZ_CAJZAV010000015.1 Protein Homology CDS 7767 8117 . - 0 ID=cds-WP_059485079.1;Parent=gene-LDO49_RS02345;Dbxref=GenBank:WP_059485079.1;Name=WP_059485079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355481.1;locus_tag=LDO49_RS02345;product=hypothetical protein;protein_id=WP_059485079.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 8321 9805 . + . ID=gene-LDO49_RS02350;Name=LDO49_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02350;old_locus_tag=BCEP4_1110011 NZ_CAJZAV010000015.1 Protein Homology CDS 8321 9805 . + 0 ID=cds-WP_059552396.1;Parent=gene-LDO49_RS02350;Dbxref=GenBank:WP_059552396.1;Name=WP_059552396.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493273.1;locus_tag=LDO49_RS02350;product=aminotransferase-like domain-containing protein;protein_id=WP_059552396.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 9887 10162 . - . ID=gene-LDO49_RS02355;Name=LDO49_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02355;old_locus_tag=BCEP4_1110012 NZ_CAJZAV010000015.1 Protein Homology CDS 9887 10162 . - 0 ID=cds-WP_027791352.1;Parent=gene-LDO49_RS02355;Dbxref=GenBank:WP_027791352.1;Name=WP_027791352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217152.1;locus_tag=LDO49_RS02355;product=hypothetical protein;protein_id=WP_027791352.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 10260 11672 . - . ID=gene-LDO49_RS02360;Name=LDO49_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02360;old_locus_tag=BCEP4_1110013 NZ_CAJZAV010000015.1 Protein Homology CDS 10260 11672 . - 0 ID=cds-WP_060071621.1;Parent=gene-LDO49_RS02360;Dbxref=GenBank:WP_060071621.1;Name=WP_060071621.1;Ontology_term=GO:0004130,GO:0016491,GO:0020037;gbkey=CDS;go_function=cytochrome-c peroxidase activity|0004130||IEA,oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488714.1;locus_tag=LDO49_RS02360;product=cytochrome-c peroxidase;protein_id=WP_060071621.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 11669 13132 . - . ID=gene-LDO49_RS02365;Name=LDO49_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02365;old_locus_tag=BCEP4_1110014 NZ_CAJZAV010000015.1 Protein Homology CDS 11669 13132 . - 0 ID=cds-WP_059591371.1;Parent=gene-LDO49_RS02365;Dbxref=GenBank:WP_059591371.1;Name=WP_059591371.1;Ontology_term=GO:0016787,GO:0042578,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488720.1;locus_tag=LDO49_RS02365;product=metallophosphoesterase family protein;protein_id=WP_059591371.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 13334 14182 . + . ID=gene-LDO49_RS02370;Name=LDO49_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02370;old_locus_tag=BCEP4_1110015 NZ_CAJZAV010000015.1 Protein Homology CDS 13334 14182 . + 0 ID=cds-WP_060071624.1;Parent=gene-LDO49_RS02370;Dbxref=GenBank:WP_060071624.1;Name=WP_060071624.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547910.1;locus_tag=LDO49_RS02370;product=class I SAM-dependent methyltransferase;protein_id=WP_060071624.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 14282 14593 . - . ID=gene-LDO49_RS02375;Name=LDO49_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02375;old_locus_tag=BCEP4_1110016 NZ_CAJZAV010000015.1 Protein Homology CDS 14282 14593 . - 0 ID=cds-WP_060071626.1;Parent=gene-LDO49_RS02375;Dbxref=GenBank:WP_060071626.1;Name=WP_060071626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479242.1;locus_tag=LDO49_RS02375;product=hypothetical protein;protein_id=WP_060071626.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 14652 16673 . - . ID=gene-LDO49_RS02380;Name=LDO49_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02380;old_locus_tag=BCEP4_1110017 NZ_CAJZAV010000015.1 Protein Homology CDS 14652 16673 . - 0 ID=cds-WP_021156647.1;Parent=gene-LDO49_RS02380;Dbxref=GenBank:WP_021156647.1;Name=WP_021156647.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467890.1;locus_tag=LDO49_RS02380;product=BCCT family transporter;protein_id=WP_021156647.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 16993 18180 . - . ID=gene-LDO49_RS02385;Name=LDO49_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02385;old_locus_tag=BCEP4_1110018 NZ_CAJZAV010000015.1 Protein Homology CDS 16993 18180 . - 0 ID=cds-WP_027791358.1;Parent=gene-LDO49_RS02385;Dbxref=GenBank:WP_027791358.1;Name=WP_027791358.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479241.1;locus_tag=LDO49_RS02385;product=porin;protein_id=WP_027791358.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 18288 20708 . - . ID=gene-LDO49_RS02390;Name=LDO49_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02390;old_locus_tag=BCEP4_1110019 NZ_CAJZAV010000015.1 Protein Homology CDS 18288 20708 . - 0 ID=cds-WP_060071629.1;Parent=gene-LDO49_RS02390;Dbxref=GenBank:WP_060071629.1;Name=WP_060071629.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482636.1;locus_tag=LDO49_RS02390;product=glycoside hydrolase family 31 protein;protein_id=WP_060071629.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 20736 22007 . - . ID=gene-LDO49_RS02395;Name=LDO49_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02395;old_locus_tag=BCEP4_1110020 NZ_CAJZAV010000015.1 Protein Homology CDS 20736 22007 . - 0 ID=cds-WP_048021790.1;Parent=gene-LDO49_RS02395;Dbxref=GenBank:WP_048021790.1;Name=WP_048021790.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365860.1;locus_tag=LDO49_RS02395;product=MFS transporter;protein_id=WP_048021790.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 22480 23424 . + . ID=gene-LDO49_RS02400;Name=LDO49_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02400;old_locus_tag=BCEP4_1110021 NZ_CAJZAV010000015.1 Protein Homology CDS 22480 23424 . + 0 ID=cds-WP_021156643.1;Parent=gene-LDO49_RS02400;Dbxref=GenBank:WP_021156643.1;Name=WP_021156643.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482638.1;locus_tag=LDO49_RS02400;product=MurR/RpiR family transcriptional regulator;protein_id=WP_021156643.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 23421 24422 . + . ID=gene-LDO49_RS02405;Name=LDO49_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02405;old_locus_tag=BCEP4_1110022 NZ_CAJZAV010000015.1 Protein Homology CDS 23421 24422 . + 0 ID=cds-WP_060071631.1;Parent=gene-LDO49_RS02405;Dbxref=GenBank:WP_060071631.1;Name=WP_060071631.1;Ontology_term=GO:0006508,GO:0004067,GO:0008798;gbkey=CDS;go_function=asparaginase activity|0004067||IEA,beta-aspartyl-peptidase activity|0008798||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217146.1;locus_tag=LDO49_RS02405;product=isoaspartyl peptidase/L-asparaginase family protein;protein_id=WP_060071631.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 24452 26377 . + . ID=gene-LDO49_RS02410;Name=LDO49_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02410;old_locus_tag=BCEP4_1110023 NZ_CAJZAV010000015.1 Protein Homology CDS 24452 26377 . + 0 ID=cds-WP_060071633.1;Parent=gene-LDO49_RS02410;Dbxref=GenBank:WP_060071633.1;Name=WP_060071633.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495033.1;locus_tag=LDO49_RS02410;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_060071633.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 26505 28067 . + . ID=gene-LDO49_RS02415;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=LDO49_RS02415;old_locus_tag=BCEP4_1110024 NZ_CAJZAV010000015.1 Protein Homology CDS 26505 28067 . + 0 ID=cds-WP_048021797.1;Parent=gene-LDO49_RS02415;Dbxref=GenBank:WP_048021797.1;Name=WP_048021797.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603960.1;locus_tag=LDO49_RS02415;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_048021797.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 28147 29067 . + . ID=gene-LDO49_RS02420;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=LDO49_RS02420;old_locus_tag=BCEP4_1110025 NZ_CAJZAV010000015.1 Protein Homology CDS 28147 29067 . + 0 ID=cds-WP_042972832.1;Parent=gene-LDO49_RS02420;Dbxref=GenBank:WP_042972832.1;Name=WP_042972832.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765761.1;locus_tag=LDO49_RS02420;product=glutathione ABC transporter permease GsiC;protein_id=WP_042972832.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 29075 29968 . + . ID=gene-LDO49_RS02425;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=LDO49_RS02425;old_locus_tag=BCEP4_1110026 NZ_CAJZAV010000015.1 Protein Homology CDS 29075 29968 . + 0 ID=cds-WP_021156639.1;Parent=gene-LDO49_RS02425;Dbxref=GenBank:WP_021156639.1;Name=WP_021156639.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765762.1;locus_tag=LDO49_RS02425;product=glutathione ABC transporter permease GsiD;protein_id=WP_021156639.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 29968 31050 . + . ID=gene-LDO49_RS02430;Name=LDO49_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02430;old_locus_tag=BCEP4_1110027 NZ_CAJZAV010000015.1 Protein Homology CDS 29968 31050 . + 0 ID=cds-WP_060071635.1;Parent=gene-LDO49_RS02430;Dbxref=GenBank:WP_060071635.1;Name=WP_060071635.1;Ontology_term=GO:0006508,GO:0004177;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493176.1;locus_tag=LDO49_RS02430;product=DmpA family aminopeptidase;protein_id=WP_060071635.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 31047 31874 . + . ID=gene-LDO49_RS02435;Name=LDO49_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02435;old_locus_tag=BCEP4_1110028 NZ_CAJZAV010000015.1 Protein Homology CDS 31047 31874 . + 0 ID=cds-WP_059623221.1;Parent=gene-LDO49_RS02435;Dbxref=GenBank:WP_059623221.1;Name=WP_059623221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495030.1;locus_tag=LDO49_RS02435;product=M55 family metallopeptidase;protein_id=WP_059623221.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 31910 32689 . - . ID=gene-LDO49_RS02440;Name=LDO49_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02440;old_locus_tag=BCEP4_1110029 NZ_CAJZAV010000015.1 Protein Homology CDS 31910 32689 . - 0 ID=cds-WP_224051371.1;Parent=gene-LDO49_RS02440;Dbxref=GenBank:WP_224051371.1;Name=WP_224051371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355462.1;locus_tag=LDO49_RS02440;product=alpha/beta fold hydrolase;protein_id=WP_224051371.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 32833 33612 . + . ID=gene-LDO49_RS02445;Name=LDO49_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02445;old_locus_tag=BCEP4_1110030 NZ_CAJZAV010000015.1 Protein Homology CDS 32833 33612 . + 0 ID=cds-WP_027791368.1;Parent=gene-LDO49_RS02445;Dbxref=GenBank:WP_027791368.1;Name=WP_027791368.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882012.1;locus_tag=LDO49_RS02445;product=AraC family transcriptional regulator;protein_id=WP_027791368.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 34069 34662 . - . ID=gene-LDO49_RS02450;Name=pcaG;gbkey=Gene;gene=pcaG;gene_biotype=protein_coding;locus_tag=LDO49_RS02450;old_locus_tag=BCEP4_1110031 NZ_CAJZAV010000015.1 Protein Homology CDS 34069 34662 . - 0 ID=cds-WP_060071639.1;Parent=gene-LDO49_RS02450;Dbxref=GenBank:WP_060071639.1;Name=WP_060071639.1;Ontology_term=GO:0046278,GO:0005506,GO:0018578;gbkey=CDS;gene=pcaG;go_function=iron ion binding|0005506||IEA,protocatechuate 3%2C4-dioxygenase activity|0018578||IEA;go_process=3%2C4-dihydroxybenzoate metabolic process|0046278||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899603.1;locus_tag=LDO49_RS02450;product=protocatechuate 3%2C4-dioxygenase subunit alpha;protein_id=WP_060071639.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 34666 35373 . - . ID=gene-LDO49_RS02455;Name=pcaH;gbkey=Gene;gene=pcaH;gene_biotype=protein_coding;locus_tag=LDO49_RS02455;old_locus_tag=BCEP4_1110032 NZ_CAJZAV010000015.1 Protein Homology CDS 34666 35373 . - 0 ID=cds-WP_224051372.1;Parent=gene-LDO49_RS02455;Dbxref=GenBank:WP_224051372.1;Name=WP_224051372.1;Ontology_term=GO:0046278,GO:0005506,GO:0018578;gbkey=CDS;gene=pcaH;go_function=iron ion binding|0005506||IEA,protocatechuate 3%2C4-dioxygenase activity|0018578||IEA;go_process=3%2C4-dihydroxybenzoate metabolic process|0046278||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725036.1;locus_tag=LDO49_RS02455;product=protocatechuate 3%2C4-dioxygenase subunit beta;protein_id=WP_224051372.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 35648 36223 . - . ID=gene-LDO49_RS02460;Name=LDO49_RS02460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02460;old_locus_tag=BCEP4_1110033 NZ_CAJZAV010000015.1 Protein Homology CDS 35648 36223 . - 0 ID=cds-WP_060071936.1;Parent=gene-LDO49_RS02460;Dbxref=GenBank:WP_060071936.1;Name=WP_060071936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355458.1;locus_tag=LDO49_RS02460;product=YiiX/YebB-like N1pC/P60 family cysteine hydrolase;protein_id=WP_060071936.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 36344 37081 . + . ID=gene-LDO49_RS02465;Name=LDO49_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02465;old_locus_tag=BCEP4_1110034 NZ_CAJZAV010000015.1 Protein Homology CDS 36344 37081 . + 0 ID=cds-WP_027791371.1;Parent=gene-LDO49_RS02465;Dbxref=GenBank:WP_027791371.1;Name=WP_027791371.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758574.1;locus_tag=LDO49_RS02465;product=helix-turn-helix domain-containing protein;protein_id=WP_027791371.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 37159 38145 . + . ID=gene-LDO49_RS02470;Name=pcaQ;gbkey=Gene;gene=pcaQ;gene_biotype=protein_coding;locus_tag=LDO49_RS02470;old_locus_tag=BCEP4_1110035 NZ_CAJZAV010000015.1 Protein Homology CDS 37159 38145 . + 0 ID=cds-WP_021159506.1;Parent=gene-LDO49_RS02470;Dbxref=GenBank:WP_021159506.1;Name=WP_021159506.1;Ontology_term=GO:0019619,GO:0045893,GO:0003677;gbkey=CDS;gene=pcaQ;go_function=DNA binding|0003677||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA,positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355456.1;locus_tag=LDO49_RS02470;product=pca operon transcription factor PcaQ;protein_id=WP_021159506.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 38273 38632 . + . ID=gene-LDO49_RS02475;Name=LDO49_RS02475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02475;old_locus_tag=BCEP4_1110036 NZ_CAJZAV010000015.1 Protein Homology CDS 38273 38632 . + 0 ID=cds-WP_060071938.1;Parent=gene-LDO49_RS02475;Dbxref=GenBank:WP_060071938.1;Name=WP_060071938.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365873.1;locus_tag=LDO49_RS02475;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_060071938.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 38706 39002 . + . ID=gene-LDO49_RS02480;Name=LDO49_RS02480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02480;old_locus_tag=BCEP4_1110037 NZ_CAJZAV010000015.1 Protein Homology CDS 38706 39002 . + 0 ID=cds-WP_042975052.1;Parent=gene-LDO49_RS02480;Dbxref=GenBank:WP_042975052.1;Name=WP_042975052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089411.1;locus_tag=LDO49_RS02480;product=XRE family transcriptional regulator;protein_id=WP_042975052.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 39145 40419 . - . ID=gene-LDO49_RS02485;Name=LDO49_RS02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02485;old_locus_tag=BCEP4_1110038 NZ_CAJZAV010000015.1 Protein Homology CDS 39145 40419 . - 0 ID=cds-WP_060071640.1;Parent=gene-LDO49_RS02485;Dbxref=GenBank:WP_060071640.1;Name=WP_060071640.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495021.1;locus_tag=LDO49_RS02485;product=APC family permease;protein_id=WP_060071640.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 40555 45090 . - . ID=gene-LDO49_RS02490;Name=LDO49_RS02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02490;old_locus_tag=BCEP4_1110039 NZ_CAJZAV010000015.1 Protein Homology CDS 40555 45090 . - 0 ID=cds-WP_224051373.1;Parent=gene-LDO49_RS02490;Dbxref=GenBank:WP_224051373.1;Name=WP_224051373.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899596.1;locus_tag=LDO49_RS02490;product=DEAD/DEAH box helicase;protein_id=WP_224051373.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 45322 45846 . - . ID=gene-LDO49_RS02495;Name=LDO49_RS02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02495;old_locus_tag=BCEP4_1110040 NZ_CAJZAV010000015.1 Protein Homology CDS 45322 45846 . - 0 ID=cds-WP_021159502.1;Parent=gene-LDO49_RS02495;Dbxref=GenBank:WP_021159502.1;Name=WP_021159502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524227.1;locus_tag=LDO49_RS02495;product=metal-dependent hydrolase;protein_id=WP_021159502.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 46267 47988 . + . ID=gene-LDO49_RS02500;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=LDO49_RS02500;old_locus_tag=BCEP4_1110041 NZ_CAJZAV010000015.1 Protein Homology CDS 46267 47988 . + 0 ID=cds-WP_042975050.1;Parent=gene-LDO49_RS02500;Dbxref=GenBank:WP_042975050.1;Name=WP_042975050.1;Ontology_term=GO:0006750,GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione biosynthetic process|0006750||IEA,glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004547566.1;locus_tag=LDO49_RS02500;product=gamma-glutamyltransferase;protein_id=WP_042975050.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 48075 48998 . - . ID=gene-LDO49_RS02505;Name=LDO49_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02505;old_locus_tag=BCEP4_1110042 NZ_CAJZAV010000015.1 Protein Homology CDS 48075 48998 . - 0 ID=cds-WP_060071646.1;Parent=gene-LDO49_RS02505;Dbxref=GenBank:WP_060071646.1;Name=WP_060071646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547885.1;locus_tag=LDO49_RS02505;product=alpha/beta fold hydrolase;protein_id=WP_060071646.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 49352 49801 . + . ID=gene-LDO49_RS02510;Name=LDO49_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02510;old_locus_tag=BCEP4_1110043 NZ_CAJZAV010000015.1 Protein Homology CDS 49352 49801 . + 0 ID=cds-WP_027791380.1;Parent=gene-LDO49_RS02510;Dbxref=GenBank:WP_027791380.1;Name=WP_027791380.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355448.1;locus_tag=LDO49_RS02510;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_027791380.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 49832 50443 . - . ID=gene-LDO49_RS02515;Name=LDO49_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02515;old_locus_tag=BCEP4_1110044 NZ_CAJZAV010000015.1 Protein Homology CDS 49832 50443 . - 0 ID=cds-WP_027791381.1;Parent=gene-LDO49_RS02515;Dbxref=GenBank:WP_027791381.1;Name=WP_027791381.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355447.1;locus_tag=LDO49_RS02515;product=ANTAR domain-containing response regulator;protein_id=WP_027791381.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 50450 51592 . - . ID=gene-LDO49_RS02520;Name=LDO49_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02520;old_locus_tag=BCEP4_1110045 NZ_CAJZAV010000015.1 Protein Homology CDS 50450 51592 . - 0 ID=cds-WP_021159497.1;Parent=gene-LDO49_RS02520;Dbxref=GenBank:WP_021159497.1;Name=WP_021159497.1;Ontology_term=GO:0006865,GO:0034251,GO:0016301,GO:0033218;gbkey=CDS;go_function=kinase activity|0016301||IEA,amide binding|0033218||IEA;go_process=amino acid transport|0006865||IEA,regulation of amide catabolic process|0034251||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495016.1;locus_tag=LDO49_RS02520;product=transporter substrate-binding domain-containing protein;protein_id=WP_021159497.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 51625 53184 . - . ID=gene-LDO49_RS02525;Name=LDO49_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02525;old_locus_tag=BCEP4_1110046 NZ_CAJZAV010000015.1 Protein Homology CDS 51625 53184 . - 0 ID=cds-WP_224051375.1;Parent=gene-LDO49_RS02525;Dbxref=GenBank:WP_224051375.1;Name=WP_224051375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495015.1;locus_tag=LDO49_RS02525;product=nitric oxide reductase activation protein;protein_id=WP_224051375.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 53181 54020 . - . ID=gene-LDO49_RS02530;Name=LDO49_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02530;old_locus_tag=BCEP4_1110047 NZ_CAJZAV010000015.1 Protein Homology CDS 53181 54020 . - 0 ID=cds-WP_060071650.1;Parent=gene-LDO49_RS02530;Dbxref=GenBank:WP_060071650.1;Name=WP_060071650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495014.1;locus_tag=LDO49_RS02530;product=CbbQ/NirQ/NorQ/GpvN family protein;protein_id=WP_060071650.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 54020 54502 . - . ID=gene-LDO49_RS02535;Name=LDO49_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02535;old_locus_tag=BCEP4_1110048 NZ_CAJZAV010000015.1 Protein Homology CDS 54020 54502 . - 0 ID=cds-WP_021159494.1;Parent=gene-LDO49_RS02535;Dbxref=GenBank:WP_021159494.1;Name=WP_021159494.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355443.1;locus_tag=LDO49_RS02535;product=AmiS/UreI family transporter;protein_id=WP_021159494.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 54571 55608 . - . ID=gene-LDO49_RS02540;Name=LDO49_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02540;old_locus_tag=BCEP4_1110049 NZ_CAJZAV010000015.1 Protein Homology CDS 54571 55608 . - 0 ID=cds-WP_021159493.1;Parent=gene-LDO49_RS02540;Dbxref=GenBank:WP_021159493.1;Name=WP_021159493.1;Ontology_term=GO:0008152,GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012205469.1;locus_tag=LDO49_RS02540;product=aliphatic amidase;protein_id=WP_021159493.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 56086 57501 . - . ID=gene-LDO49_RS02545;Name=LDO49_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02545;old_locus_tag=BCEP4_1110051 NZ_CAJZAV010000015.1 Protein Homology CDS 56086 57501 . - 0 ID=cds-WP_060071652.1;Parent=gene-LDO49_RS02545;Dbxref=GenBank:WP_060071652.1;Name=WP_060071652.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479217.1;locus_tag=LDO49_RS02545;product=TolC family protein;protein_id=WP_060071652.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 57783 57956 . + . ID=gene-LDO49_RS02550;Name=LDO49_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02550;old_locus_tag=BCEP4_1110052 NZ_CAJZAV010000015.1 Protein Homology CDS 57783 57956 . + 0 ID=cds-WP_006495012.1;Parent=gene-LDO49_RS02550;Dbxref=GenBank:WP_006495012.1;Name=WP_006495012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009896656.1;locus_tag=LDO49_RS02550;product=hypothetical protein;protein_id=WP_006495012.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 58182 58367 . + . ID=gene-LDO49_RS02555;Name=LDO49_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02555;old_locus_tag=BCEP4_1110053 NZ_CAJZAV010000015.1 Protein Homology CDS 58182 58367 . + 0 ID=cds-WP_021159490.1;Parent=gene-LDO49_RS02555;Dbxref=GenBank:WP_021159490.1;Name=WP_021159490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479215.1;locus_tag=LDO49_RS02555;product=hypothetical protein;protein_id=WP_021159490.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 58512 60632 . + . ID=gene-LDO49_RS02560;Name=LDO49_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02560;old_locus_tag=BCEP4_1110054 NZ_CAJZAV010000015.1 Protein Homology CDS 58512 60632 . + 0 ID=cds-WP_124474671.1;Parent=gene-LDO49_RS02560;Dbxref=GenBank:WP_124474671.1;Name=WP_124474671.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694712.1;locus_tag=LDO49_RS02560;product=peptidase domain-containing ABC transporter;protein_id=WP_124474671.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 60629 61633 . + . ID=gene-LDO49_RS02565;Name=LDO49_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02565;old_locus_tag=BCEP4_1110055 NZ_CAJZAV010000015.1 Protein Homology CDS 60629 61633 . + 0 ID=cds-WP_059552361.1;Parent=gene-LDO49_RS02565;Dbxref=GenBank:WP_059552361.1;Name=WP_059552361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481683.1;locus_tag=LDO49_RS02565;product=hypothetical protein;protein_id=WP_059552361.1;transl_table=11 NZ_CAJZAV010000015.1 RefSeq gene 61646 62941 . + . ID=gene-LDO49_RS02570;Name=LDO49_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02570;old_locus_tag=BCEP4_1110056 NZ_CAJZAV010000015.1 Protein Homology CDS 61646 62941 . + 0 ID=cds-WP_060071656.1;Parent=gene-LDO49_RS02570;Dbxref=GenBank:WP_060071656.1;Name=WP_060071656.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009896664.1;locus_tag=LDO49_RS02570;product=HlyD family secretion protein;protein_id=WP_060071656.1;transl_table=11 ##sequence-region NZ_CAJZAV010000016.1 1 27489 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000016.1 RefSeq region 1 27489 . + . ID=NZ_CAJZAV010000016.1:1..27489;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_112 NZ_CAJZAV010000016.1 RefSeq gene 1 924 . + . ID=gene-LDO49_RS02575;Name=LDO49_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02575;old_locus_tag=BCEP4_1120001;partial=true;start_range=.,1 NZ_CAJZAV010000016.1 Protein Homology CDS 1 924 . + 0 ID=cds-WP_224051376.1;Parent=gene-LDO49_RS02575;Dbxref=GenBank:WP_224051376.1;Name=WP_224051376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548046.1;locus_tag=LDO49_RS02575;partial=true;product=sulfonate ABC transporter substrate-binding protein;protein_id=WP_224051376.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 971 1555 . - . ID=gene-LDO49_RS02580;Name=LDO49_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02580;old_locus_tag=BCEP4_1120002 NZ_CAJZAV010000016.1 Protein Homology CDS 971 1555 . - 0 ID=cds-WP_060072338.1;Parent=gene-LDO49_RS02580;Dbxref=GenBank:WP_060072338.1;Name=WP_060072338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355667.1;locus_tag=LDO49_RS02580;product=putative glycolipid-binding domain-containing protein;protein_id=WP_060072338.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 1730 2638 . + . ID=gene-LDO49_RS02585;Name=LDO49_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02585;old_locus_tag=BCEP4_1120003 NZ_CAJZAV010000016.1 Protein Homology CDS 1730 2638 . + 0 ID=cds-WP_042977447.1;Parent=gene-LDO49_RS02585;Dbxref=GenBank:WP_042977447.1;Name=WP_042977447.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338446.1;locus_tag=LDO49_RS02585;product=LysR family transcriptional regulator;protein_id=WP_042977447.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 2654 4039 . - . ID=gene-LDO49_RS02590;Name=potE;gbkey=Gene;gene=potE;gene_biotype=protein_coding;locus_tag=LDO49_RS02590;old_locus_tag=BCEP4_1120004 NZ_CAJZAV010000016.1 Protein Homology CDS 2654 4039 . - 0 ID=cds-WP_224051377.1;Parent=gene-LDO49_RS02590;Dbxref=GenBank:WP_224051377.1;Name=WP_224051377.1;Ontology_term=GO:0015822,GO:0015847,GO:0055085,GO:0015496,GO:0016020;gbkey=CDS;gene=potE;go_component=membrane|0016020||IEA;go_function=putrescine:ornithine antiporter activity|0015496||IEA;go_process=ornithine transport|0015822||IEA,putrescine transport|0015847||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488914.1;locus_tag=LDO49_RS02590;product=putrescine-ornithine antiporter;protein_id=WP_224051377.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq pseudogene 4134 6433 . - . ID=gene-LDO49_RS02595;Name=LDO49_RS02595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS02595;old_locus_tag=BCEP4_1120005;pseudo=true NZ_CAJZAV010000016.1 Protein Homology CDS 4134 6433 . - 0 ID=cds-LDO49_RS02595;Parent=gene-LDO49_RS02595;Note=frameshifted;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495918.1;locus_tag=LDO49_RS02595;product=Orn/Lys/Arg decarboxylase N-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 6950 9130 . + . ID=gene-LDO49_RS02600;Name=LDO49_RS02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02600;old_locus_tag=BCEP4_1120006 NZ_CAJZAV010000016.1 Protein Homology CDS 6950 9130 . + 0 ID=cds-WP_224051378.1;Parent=gene-LDO49_RS02600;Dbxref=GenBank:WP_224051378.1;Name=WP_224051378.1;Ontology_term=GO:0006596,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=polyamine biosynthetic process|0006596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355670.1;locus_tag=LDO49_RS02600;product=ornithine decarboxylase;protein_id=WP_224051378.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 9231 10388 . - . ID=gene-LDO49_RS02605;Name=LDO49_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02605;old_locus_tag=BCEP4_1120008 NZ_CAJZAV010000016.1 Protein Homology CDS 9231 10388 . - 0 ID=cds-WP_060072342.1;Parent=gene-LDO49_RS02605;Dbxref=GenBank:WP_060072342.1;Name=WP_060072342.1;Ontology_term=GO:0030554,GO:0046872;gbkey=CDS;go_function=adenyl nucleotide binding|0030554||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725145.1;locus_tag=LDO49_RS02605;product=iron-containing alcohol dehydrogenase;protein_id=WP_060072342.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 10388 10720 . - . ID=gene-LDO49_RS02610;Name=LDO49_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02610;old_locus_tag=BCEP4_1120009 NZ_CAJZAV010000016.1 Protein Homology CDS 10388 10720 . - 0 ID=cds-WP_048026491.1;Parent=gene-LDO49_RS02610;Dbxref=GenBank:WP_048026491.1;Name=WP_048026491.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881897.1;locus_tag=LDO49_RS02610;product=putative quinol monooxygenase;protein_id=WP_048026491.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 10948 11664 . - . ID=gene-LDO49_RS02615;Name=LDO49_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02615;old_locus_tag=BCEP4_1120010 NZ_CAJZAV010000016.1 Protein Homology CDS 10948 11664 . - 0 ID=cds-WP_060072344.1;Parent=gene-LDO49_RS02615;Dbxref=GenBank:WP_060072344.1;Name=WP_060072344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548056.1;locus_tag=LDO49_RS02615;product=SDR family oxidoreductase;protein_id=WP_060072344.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 11798 12793 . + . ID=gene-LDO49_RS02620;Name=LDO49_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02620;old_locus_tag=BCEP4_1120011 NZ_CAJZAV010000016.1 Protein Homology CDS 11798 12793 . + 0 ID=cds-WP_060072346.1;Parent=gene-LDO49_RS02620;Dbxref=GenBank:WP_060072346.1;Name=WP_060072346.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488825.1;locus_tag=LDO49_RS02620;product=LysR family transcriptional regulator;protein_id=WP_060072346.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 12802 13539 . - . ID=gene-LDO49_RS02625;Name=LDO49_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02625;old_locus_tag=BCEP4_1120012 NZ_CAJZAV010000016.1 Protein Homology CDS 12802 13539 . - 0 ID=cds-WP_060072348.1;Parent=gene-LDO49_RS02625;Dbxref=GenBank:WP_060072348.1;Name=WP_060072348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355681.1;locus_tag=LDO49_RS02625;product=SDR family oxidoreductase;protein_id=WP_060072348.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 13643 14599 . + . ID=gene-LDO49_RS02630;Name=LDO49_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02630;old_locus_tag=BCEP4_1120013 NZ_CAJZAV010000016.1 Protein Homology CDS 13643 14599 . + 0 ID=cds-WP_060072351.1;Parent=gene-LDO49_RS02630;Dbxref=GenBank:WP_060072351.1;Name=WP_060072351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355682.1;locus_tag=LDO49_RS02630;product=LysR family transcriptional regulator;protein_id=WP_060072351.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 14752 16140 . + . ID=gene-LDO49_RS02635;Name=LDO49_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02635;old_locus_tag=BCEP4_1120014 NZ_CAJZAV010000016.1 Protein Homology CDS 14752 16140 . + 0 ID=cds-WP_048026500.1;Parent=gene-LDO49_RS02635;Dbxref=GenBank:WP_048026500.1;Name=WP_048026500.1;Ontology_term=GO:0015851,GO:0015205,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554516.1;locus_tag=LDO49_RS02635;product=nucleobase:cation symporter-2 family protein;protein_id=WP_048026500.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 16596 17021 . + . ID=gene-LDO49_RS02640;Name=LDO49_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02640;old_locus_tag=BCEP4_1120015 NZ_CAJZAV010000016.1 Protein Homology CDS 16596 17021 . + 0 ID=cds-WP_060072354.1;Parent=gene-LDO49_RS02640;Dbxref=GenBank:WP_060072354.1;Name=WP_060072354.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488849.1;locus_tag=LDO49_RS02640;product=NUDIX hydrolase;protein_id=WP_060072354.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 17098 17310 . - . ID=gene-LDO49_RS02645;Name=LDO49_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02645;old_locus_tag=BCEP4_1120016 NZ_CAJZAV010000016.1 Protein Homology CDS 17098 17310 . - 0 ID=cds-WP_060072364.1;Parent=gene-LDO49_RS02645;Dbxref=GenBank:WP_060072364.1;Name=WP_060072364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899787.1;locus_tag=LDO49_RS02645;product=hypothetical protein;protein_id=WP_060072364.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 17699 18679 . + . ID=gene-LDO49_RS02650;Name=LDO49_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02650;old_locus_tag=BCEP4_1120018 NZ_CAJZAV010000016.1 Protein Homology CDS 17699 18679 . + 0 ID=cds-WP_224051379.1;Parent=gene-LDO49_RS02650;Dbxref=GenBank:WP_224051379.1;Name=WP_224051379.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108102.1;locus_tag=LDO49_RS02650;product=AraC family transcriptional regulator;protein_id=WP_224051379.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 18771 19337 . + . ID=gene-LDO49_RS02655;Name=LDO49_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02655;old_locus_tag=BCEP4_1120019 NZ_CAJZAV010000016.1 Protein Homology CDS 18771 19337 . + 0 ID=cds-WP_059622076.1;Parent=gene-LDO49_RS02655;Dbxref=GenBank:WP_059622076.1;Name=WP_059622076.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492422.1;locus_tag=LDO49_RS02655;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_059622076.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 19334 20413 . + . ID=gene-LDO49_RS02660;Name=LDO49_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02660;old_locus_tag=BCEP4_1120020 NZ_CAJZAV010000016.1 Protein Homology CDS 19334 20413 . + 0 ID=cds-WP_060072356.1;Parent=gene-LDO49_RS02660;Dbxref=GenBank:WP_060072356.1;Name=WP_060072356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690073.1;locus_tag=LDO49_RS02660;product=acyl-CoA dehydrogenase family protein;protein_id=WP_060072356.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 20410 21174 . + . ID=gene-LDO49_RS02665;Name=LDO49_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02665;old_locus_tag=BCEP4_1120021 NZ_CAJZAV010000016.1 Protein Homology CDS 20410 21174 . + 0 ID=cds-WP_060072358.1;Parent=gene-LDO49_RS02665;Dbxref=GenBank:WP_060072358.1;Name=WP_060072358.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007177150.1;locus_tag=LDO49_RS02665;product=ABC transporter ATP-binding protein;protein_id=WP_060072358.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 21203 22393 . + . ID=gene-LDO49_RS02670;Name=LDO49_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02670;old_locus_tag=BCEP4_1120022 NZ_CAJZAV010000016.1 Protein Homology CDS 21203 22393 . + 0 ID=cds-WP_060072360.1;Parent=gene-LDO49_RS02670;Dbxref=GenBank:WP_060072360.1;Name=WP_060072360.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483324.1;locus_tag=LDO49_RS02670;product=ABC transporter substrate-binding protein;protein_id=WP_060072360.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 22365 23303 . + . ID=gene-LDO49_RS02675;Name=LDO49_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02675;old_locus_tag=BCEP4_1120023 NZ_CAJZAV010000016.1 Protein Homology CDS 22365 23303 . + 0 ID=cds-WP_372585823.1;Parent=gene-LDO49_RS02675;Dbxref=GenBank:WP_372585823.1;Name=WP_372585823.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603277.1;locus_tag=LDO49_RS02675;product=ABC transporter permease;protein_id=WP_372585823.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 23696 24259 . - . ID=gene-LDO49_RS02680;Name=LDO49_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02680;old_locus_tag=BCEP4_1120024 NZ_CAJZAV010000016.1 GeneMarkS-2+ CDS 23696 24259 . - 0 ID=cds-WP_124475767.1;Parent=gene-LDO49_RS02680;Dbxref=GenBank:WP_124475767.1;Name=WP_124475767.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS02680;product=hypothetical protein;protein_id=WP_124475767.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 25008 25084 . + . ID=gene-LDO49_RS02685;Name=LDO49_RS02685;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS02685;old_locus_tag=BCEP4_TRNA19 NZ_CAJZAV010000016.1 tRNAscan-SE tRNA 25008 25084 . + . ID=rna-LDO49_RS02685;Parent=gene-LDO49_RS02685;anticodon=(pos:25042..25044);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS02685;product=tRNA-Pro NZ_CAJZAV010000016.1 tRNAscan-SE exon 25008 25084 . + . ID=exon-LDO49_RS02685-1;Parent=rna-LDO49_RS02685;anticodon=(pos:25042..25044);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS02685;product=tRNA-Pro NZ_CAJZAV010000016.1 RefSeq gene 25087 25160 . + . ID=gene-LDO49_RS02690;Name=LDO49_RS02690;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS02690;old_locus_tag=BCEP4_TRNA20 NZ_CAJZAV010000016.1 tRNAscan-SE tRNA 25087 25160 . + . ID=rna-LDO49_RS02690;Parent=gene-LDO49_RS02690;anticodon=(pos:25119..25121);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS02690;product=tRNA-Gly NZ_CAJZAV010000016.1 tRNAscan-SE exon 25087 25160 . + . ID=exon-LDO49_RS02690-1;Parent=rna-LDO49_RS02690;anticodon=(pos:25119..25121);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS02690;product=tRNA-Gly NZ_CAJZAV010000016.1 RefSeq gene 25165 25240 . + . ID=gene-LDO49_RS02695;Name=LDO49_RS02695;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS02695;old_locus_tag=BCEP4_TRNA21 NZ_CAJZAV010000016.1 tRNAscan-SE tRNA 25165 25240 . + . ID=rna-LDO49_RS02695;Parent=gene-LDO49_RS02695;anticodon=(pos:25198..25200);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS02695;product=tRNA-Ile NZ_CAJZAV010000016.1 tRNAscan-SE exon 25165 25240 . + . ID=exon-LDO49_RS02695-1;Parent=rna-LDO49_RS02695;anticodon=(pos:25198..25200);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS02695;product=tRNA-Ile NZ_CAJZAV010000016.1 RefSeq gene 25244 25334 . + . ID=gene-LDO49_RS02700;Name=LDO49_RS02700;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS02700;old_locus_tag=BCEP4_TRNA22 NZ_CAJZAV010000016.1 tRNAscan-SE tRNA 25244 25334 . + . ID=rna-LDO49_RS02700;Parent=gene-LDO49_RS02700;anticodon=(pos:25278..25280);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS02700;product=tRNA-Leu NZ_CAJZAV010000016.1 tRNAscan-SE exon 25244 25334 . + . ID=exon-LDO49_RS02700-1;Parent=rna-LDO49_RS02700;anticodon=(pos:25278..25280);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS02700;product=tRNA-Leu NZ_CAJZAV010000016.1 RefSeq gene 25345 25758 . - . ID=gene-LDO49_RS02705;Name=LDO49_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02705 NZ_CAJZAV010000016.1 Protein Homology CDS 25345 25758 . - 0 ID=cds-WP_124476014.1;Parent=gene-LDO49_RS02705;Dbxref=GenBank:WP_124476014.1;Name=WP_124476014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405660.1;locus_tag=LDO49_RS02705;product=hypothetical protein;protein_id=WP_124476014.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 26085 26306 . - . ID=gene-LDO49_RS02710;Name=LDO49_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02710 NZ_CAJZAV010000016.1 GeneMarkS-2+ CDS 26085 26306 . - 0 ID=cds-WP_060071490.1;Parent=gene-LDO49_RS02710;Dbxref=GenBank:WP_060071490.1;Name=WP_060071490.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS02710;product=hypothetical protein;protein_id=WP_060071490.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq gene 26362 26457 . - . ID=gene-LDO49_RS02715;Name=LDO49_RS02715;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS02715;old_locus_tag=BCEP4_TRNA33 NZ_CAJZAV010000016.1 tRNAscan-SE tRNA 26362 26457 . - . ID=rna-LDO49_RS02715;Parent=gene-LDO49_RS02715;anticodon=(pos:complement(26421..26423));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS02715;product=tRNA-Sec NZ_CAJZAV010000016.1 tRNAscan-SE exon 26362 26457 . - . ID=exon-LDO49_RS02715-1;Parent=rna-LDO49_RS02715;anticodon=(pos:complement(26421..26423));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS02715;product=tRNA-Sec NZ_CAJZAV010000016.1 RefSeq gene 26491 27263 . - . ID=gene-LDO49_RS02720;Name=LDO49_RS02720;end_range=27263,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02720;old_locus_tag=BCEP4_1120031;partial=true NZ_CAJZAV010000016.1 Protein Homology CDS 26491 27263 . - 2 ID=cds-WP_443797896.1;Parent=gene-LDO49_RS02720;Dbxref=GenBank:WP_443797896.1;Name=WP_443797896.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0005525,GO:0005737;end_range=27263,.;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495930.1;locus_tag=LDO49_RS02720;partial=true;product=SelB domain-containing protein;protein_id=WP_443797896.1;transl_table=11 NZ_CAJZAV010000016.1 RefSeq pseudogene 27274 27489 . - . ID=gene-LDO49_RS37750;Name=LDO49_RS37750;end_range=27489,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37750;old_locus_tag=BCEP4_1120032;partial=true;pseudo=true;start_range=.,27274 NZ_CAJZAV010000016.1 Protein Homology CDS 27274 27489 . - 2 ID=cds-LDO49_RS37750;Parent=gene-LDO49_RS37750;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=27489,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014250284.1;locus_tag=LDO49_RS37750;partial=true;product=selenocysteine-specific translation elongation factor;pseudo=true;start_range=.,27274;transl_table=11 ##sequence-region NZ_CAJZAV010000017.1 1 67557 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000017.1 RefSeq region 1 67557 . + . ID=NZ_CAJZAV010000017.1:1..67557;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_113 NZ_CAJZAV010000017.1 RefSeq gene 1 375 . - . ID=gene-LDO49_RS02725;Name=LDO49_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02725;partial=true;start_range=.,1 NZ_CAJZAV010000017.1 Protein Homology CDS 1 375 . - 0 ID=cds-WP_224051381.1;Parent=gene-LDO49_RS02725;Dbxref=GenBank:WP_224051381.1;Name=WP_224051381.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356129.1;locus_tag=LDO49_RS02725;partial=true;product=LysR family transcriptional regulator;protein_id=WP_224051381.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 674 1867 . + . ID=gene-LDO49_RS02730;Name=LDO49_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02730;old_locus_tag=BCEP4_1130002 NZ_CAJZAV010000017.1 Protein Homology CDS 674 1867 . + 0 ID=cds-WP_021158383.1;Parent=gene-LDO49_RS02730;Dbxref=GenBank:WP_021158383.1;Name=WP_021158383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416569.1;locus_tag=LDO49_RS02730;product=ABC transporter substrate-binding protein;protein_id=WP_021158383.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 1902 3713 . + . ID=gene-LDO49_RS02735;Name=LDO49_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02735;old_locus_tag=BCEP4_1130003 NZ_CAJZAV010000017.1 Protein Homology CDS 1902 3713 . + 0 ID=cds-WP_060070999.1;Parent=gene-LDO49_RS02735;Dbxref=GenBank:WP_060070999.1;Name=WP_060070999.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356127.1;locus_tag=LDO49_RS02735;product=ABC transporter permease;protein_id=WP_060070999.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 3725 4582 . + . ID=gene-LDO49_RS02740;Name=LDO49_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02740;old_locus_tag=BCEP4_1130004 NZ_CAJZAV010000017.1 Protein Homology CDS 3725 4582 . + 0 ID=cds-WP_060071002.1;Parent=gene-LDO49_RS02740;Dbxref=GenBank:WP_060071002.1;Name=WP_060071002.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602895.1;locus_tag=LDO49_RS02740;product=ABC transporter ATP-binding protein;protein_id=WP_060071002.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 4612 5340 . + . ID=gene-LDO49_RS02745;Name=LDO49_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02745;old_locus_tag=BCEP4_1130005 NZ_CAJZAV010000017.1 Protein Homology CDS 4612 5340 . + 0 ID=cds-WP_124474936.1;Parent=gene-LDO49_RS02745;Dbxref=GenBank:WP_124474936.1;Name=WP_124474936.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486118.1;locus_tag=LDO49_RS02745;product=ABC transporter ATP-binding protein;protein_id=WP_124474936.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 5398 6018 . - . ID=gene-LDO49_RS02750;Name=LDO49_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02750;old_locus_tag=BCEP4_1130006 NZ_CAJZAV010000017.1 Protein Homology CDS 5398 6018 . - 0 ID=cds-WP_021158387.1;Parent=gene-LDO49_RS02750;Dbxref=GenBank:WP_021158387.1;Name=WP_021158387.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018314909.1;locus_tag=LDO49_RS02750;product=TetR/AcrR family transcriptional regulator;protein_id=WP_021158387.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 6388 8445 . + . ID=gene-LDO49_RS02755;Name=LDO49_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02755;old_locus_tag=BCEP4_1130008 NZ_CAJZAV010000017.1 Protein Homology CDS 6388 8445 . + 0 ID=cds-WP_060071008.1;Parent=gene-LDO49_RS02755;Dbxref=GenBank:WP_060071008.1;Name=WP_060071008.1;Ontology_term=GO:0015926;gbkey=CDS;go_function=glucosidase activity|0015926||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658309.1;locus_tag=LDO49_RS02755;product=beta-glucosidase family protein;protein_id=WP_060071008.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 8489 9736 . + . ID=gene-LDO49_RS02760;Name=LDO49_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02760;old_locus_tag=BCEP4_1130009 NZ_CAJZAV010000017.1 Protein Homology CDS 8489 9736 . + 0 ID=cds-WP_059512256.1;Parent=gene-LDO49_RS02760;Dbxref=GenBank:WP_059512256.1;Name=WP_059512256.1;Ontology_term=GO:0008643,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.6;locus_tag=LDO49_RS02760;product=MFS transporter;protein_id=WP_059512256.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 9768 11255 . + . ID=gene-LDO49_RS02765;Name=LDO49_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02765;old_locus_tag=BCEP4_1130010 NZ_CAJZAV010000017.1 Protein Homology CDS 9768 11255 . + 0 ID=cds-WP_060071011.1;Parent=gene-LDO49_RS02765;Dbxref=GenBank:WP_060071011.1;Name=WP_060071011.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658311.1;locus_tag=LDO49_RS02765;product=sulfatase-like hydrolase/transferase;protein_id=WP_060071011.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 11416 12453 . + . ID=gene-LDO49_RS02770;Name=LDO49_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02770;old_locus_tag=BCEP4_1130011 NZ_CAJZAV010000017.1 Protein Homology CDS 11416 12453 . + 0 ID=cds-WP_059489044.1;Parent=gene-LDO49_RS02770;Dbxref=GenBank:WP_059489044.1;Name=WP_059489044.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011488835.1;locus_tag=LDO49_RS02770;product=porin;protein_id=WP_059489044.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 12520 12921 . + . ID=gene-LDO49_RS02775;Name=LDO49_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02775;old_locus_tag=BCEP4_1130012 NZ_CAJZAV010000017.1 Protein Homology CDS 12520 12921 . + 0 ID=cds-WP_042974031.1;Parent=gene-LDO49_RS02775;Dbxref=GenBank:WP_042974031.1;Name=WP_042974031.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: protein motif:HMM:NF016836.6;locus_tag=LDO49_RS02775;product=BON domain-containing protein;protein_id=WP_042974031.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 13050 14675 . + . ID=gene-LDO49_RS02780;Name=LDO49_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02780;old_locus_tag=BCEP4_1130013 NZ_CAJZAV010000017.1 Protein Homology CDS 13050 14675 . + 0 ID=cds-WP_060071014.1;Parent=gene-LDO49_RS02780;Dbxref=GenBank:WP_060071014.1;Name=WP_060071014.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658314.1;locus_tag=LDO49_RS02780;product=sulfatase;protein_id=WP_060071014.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 14751 15722 . + . ID=gene-LDO49_RS02785;Name=LDO49_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02785;old_locus_tag=BCEP4_1130014 NZ_CAJZAV010000017.1 Protein Homology CDS 14751 15722 . + 0 ID=cds-WP_175851189.1;Parent=gene-LDO49_RS02785;Dbxref=GenBank:WP_175851189.1;Name=WP_175851189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658307.1;locus_tag=LDO49_RS02785;product=formylglycine-generating enzyme family protein;protein_id=WP_175851189.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 16010 16462 . + . ID=gene-LDO49_RS02790;Name=LDO49_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02790;old_locus_tag=BCEP4_1130016 NZ_CAJZAV010000017.1 Protein Homology CDS 16010 16462 . + 0 ID=cds-WP_060071017.1;Parent=gene-LDO49_RS02790;Dbxref=GenBank:WP_060071017.1;Name=WP_060071017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694624.1;locus_tag=LDO49_RS02790;product=hypothetical protein;protein_id=WP_060071017.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 16514 17935 . - . ID=gene-LDO49_RS02795;Name=LDO49_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02795;old_locus_tag=BCEP4_1130017 NZ_CAJZAV010000017.1 Protein Homology CDS 16514 17935 . - 0 ID=cds-WP_060071020.1;Parent=gene-LDO49_RS02795;Dbxref=GenBank:WP_060071020.1;Name=WP_060071020.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356120.1;locus_tag=LDO49_RS02795;product=sensor histidine kinase;protein_id=WP_060071020.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 17922 18587 . - . ID=gene-LDO49_RS02800;Name=LDO49_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02800;old_locus_tag=BCEP4_1130018 NZ_CAJZAV010000017.1 Protein Homology CDS 17922 18587 . - 0 ID=cds-WP_021158397.1;Parent=gene-LDO49_RS02800;Dbxref=GenBank:WP_021158397.1;Name=WP_021158397.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338672.1;locus_tag=LDO49_RS02800;product=response regulator transcription factor;protein_id=WP_021158397.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 18826 19842 . + . ID=gene-LDO49_RS02805;Name=LDO49_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02805;old_locus_tag=BCEP4_1130019 NZ_CAJZAV010000017.1 Protein Homology CDS 18826 19842 . + 0 ID=cds-WP_027790810.1;Parent=gene-LDO49_RS02805;Dbxref=GenBank:WP_027790810.1;Name=WP_027790810.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755220.1;locus_tag=LDO49_RS02805;product=ABC transporter substrate-binding protein;protein_id=WP_027790810.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 19954 21264 . + . ID=gene-LDO49_RS02810;Name=LDO49_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02810;old_locus_tag=BCEP4_1130020 NZ_CAJZAV010000017.1 Protein Homology CDS 19954 21264 . + 0 ID=cds-WP_060071023.1;Parent=gene-LDO49_RS02810;Dbxref=GenBank:WP_060071023.1;Name=WP_060071023.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338670.1;locus_tag=LDO49_RS02810;product=MFS transporter;protein_id=WP_060071023.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 21382 21657 . + . ID=gene-LDO49_RS02815;Name=LDO49_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02815;old_locus_tag=BCEP4_1130021 NZ_CAJZAV010000017.1 Protein Homology CDS 21382 21657 . + 0 ID=cds-WP_042974040.1;Parent=gene-LDO49_RS02815;Dbxref=GenBank:WP_042974040.1;Name=WP_042974040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900293.1;locus_tag=LDO49_RS02815;product=YlcI/YnfO family protein;protein_id=WP_042974040.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 21654 21953 . + . ID=gene-LDO49_RS02820;Name=LDO49_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02820;old_locus_tag=BCEP4_1130022 NZ_CAJZAV010000017.1 Protein Homology CDS 21654 21953 . + 0 ID=cds-WP_081067215.1;Parent=gene-LDO49_RS02820;Dbxref=GenBank:WP_081067215.1;Name=WP_081067215.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338669.1;locus_tag=LDO49_RS02820;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_081067215.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 22001 23797 . - . ID=gene-LDO49_RS02825;Name=LDO49_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02825;old_locus_tag=BCEP4_1130023 NZ_CAJZAV010000017.1 Protein Homology CDS 22001 23797 . - 0 ID=cds-WP_059484699.1;Parent=gene-LDO49_RS02825;Dbxref=GenBank:WP_059484699.1;Name=WP_059484699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338668.1;locus_tag=LDO49_RS02825;product=sensor histidine kinase;protein_id=WP_059484699.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 23794 24438 . - . ID=gene-LDO49_RS02830;Name=LDO49_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02830;old_locus_tag=BCEP4_1130024 NZ_CAJZAV010000017.1 Protein Homology CDS 23794 24438 . - 0 ID=cds-WP_027790813.1;Parent=gene-LDO49_RS02830;Dbxref=GenBank:WP_027790813.1;Name=WP_027790813.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356113.1;locus_tag=LDO49_RS02830;product=response regulator;protein_id=WP_027790813.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 24770 25222 . + . ID=gene-LDO49_RS02835;Name=LDO49_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02835;old_locus_tag=BCEP4_1130025 NZ_CAJZAV010000017.1 Protein Homology CDS 24770 25222 . + 0 ID=cds-WP_059484700.1;Parent=gene-LDO49_RS02835;Dbxref=GenBank:WP_059484700.1;Name=WP_059484700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755806.1;locus_tag=LDO49_RS02835;product=hypothetical protein;protein_id=WP_059484700.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 25325 27343 . + . ID=gene-LDO49_RS02840;Name=LDO49_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02840;old_locus_tag=BCEP4_1130026 NZ_CAJZAV010000017.1 Protein Homology CDS 25325 27343 . + 0 ID=cds-WP_124841590.1;Parent=gene-LDO49_RS02840;Dbxref=GenBank:WP_124841590.1;Name=WP_124841590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694633.1;locus_tag=LDO49_RS02840;product=VTT domain-containing protein;protein_id=WP_124841590.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 27360 27689 . - . ID=gene-LDO49_RS02845;Name=LDO49_RS02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02845;old_locus_tag=BCEP4_1130027 NZ_CAJZAV010000017.1 Protein Homology CDS 27360 27689 . - 0 ID=cds-WP_011356110.1;Parent=gene-LDO49_RS02845;Dbxref=GenBank:WP_011356110.1;Name=WP_011356110.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479699.1;locus_tag=LDO49_RS02845;product=helix-turn-helix domain-containing transcriptional regulator;protein_id=WP_011356110.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 27686 28018 . - . ID=gene-LDO49_RS02850;Name=LDO49_RS02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02850;old_locus_tag=BCEP4_1130028 NZ_CAJZAV010000017.1 Protein Homology CDS 27686 28018 . - 0 ID=cds-WP_048020341.1;Parent=gene-LDO49_RS02850;Dbxref=GenBank:WP_048020341.1;Name=WP_048020341.1;Ontology_term=GO:0008219,GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479698.1;locus_tag=LDO49_RS02850;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_048020341.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 28359 30809 . - . ID=gene-LDO49_RS02855;Name=LDO49_RS02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02855;old_locus_tag=BCEP4_1130030 NZ_CAJZAV010000017.1 Protein Homology CDS 28359 30809 . - 0 ID=cds-WP_224051382.1;Parent=gene-LDO49_RS02855;Dbxref=GenBank:WP_224051382.1;Name=WP_224051382.1;Ontology_term=GO:0004497,GO:0016709,GO:0016787,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,hydrolase activity|0016787||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699959.1;locus_tag=LDO49_RS02855;product=flavin-containing monooxygenase;protein_id=WP_224051382.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 30796 32505 . - . ID=gene-LDO49_RS02860;Name=LDO49_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02860;old_locus_tag=BCEP4_1130031 NZ_CAJZAV010000017.1 Protein Homology CDS 30796 32505 . - 0 ID=cds-WP_224051383.1;Parent=gene-LDO49_RS02860;Dbxref=GenBank:WP_224051383.1;Name=WP_224051383.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356106.1;locus_tag=LDO49_RS02860;product=GMC family oxidoreductase;protein_id=WP_224051383.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 32804 33835 . + . ID=gene-LDO49_RS02865;Name=LDO49_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02865;old_locus_tag=BCEP4_1130033 NZ_CAJZAV010000017.1 Protein Homology CDS 32804 33835 . + 0 ID=cds-WP_104767374.1;Parent=gene-LDO49_RS02865;Dbxref=GenBank:WP_104767374.1;Name=WP_104767374.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356105.1;locus_tag=LDO49_RS02865;product=AraC family transcriptional regulator;protein_id=WP_104767374.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 33891 34400 . + . ID=gene-LDO49_RS02870;Name=LDO49_RS02870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02870;old_locus_tag=BCEP4_1130034 NZ_CAJZAV010000017.1 Protein Homology CDS 33891 34400 . + 0 ID=cds-WP_104767373.1;Parent=gene-LDO49_RS02870;Dbxref=GenBank:WP_104767373.1;Name=WP_104767373.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660260.1;locus_tag=LDO49_RS02870;product=GNAT family N-acetyltransferase;protein_id=WP_104767373.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 34417 35370 . - . ID=gene-LDO49_RS02875;Name=LDO49_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02875;old_locus_tag=BCEP4_1130035 NZ_CAJZAV010000017.1 Protein Homology CDS 34417 35370 . - 0 ID=cds-WP_059556194.1;Parent=gene-LDO49_RS02875;Dbxref=GenBank:WP_059556194.1;Name=WP_059556194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603841.1;locus_tag=LDO49_RS02875;product=hypothetical protein;protein_id=WP_059556194.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 35429 35551 . - . ID=gene-LDO49_RS37250;Name=LDO49_RS37250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37250;old_locus_tag=BCEP4_1130036 NZ_CAJZAV010000017.1 Protein Homology CDS 35429 35551 . - 0 ID=cds-WP_006766865.1;Parent=gene-LDO49_RS37250;Dbxref=GenBank:WP_006766865.1;Name=WP_006766865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330456.1;locus_tag=LDO49_RS37250;product=hypothetical protein;protein_id=WP_006766865.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 35942 36397 . - . ID=gene-LDO49_RS02880;Name=LDO49_RS02880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02880;old_locus_tag=BCEP4_1130038 NZ_CAJZAV010000017.1 Protein Homology CDS 35942 36397 . - 0 ID=cds-WP_011356102.1;Parent=gene-LDO49_RS02880;Dbxref=GenBank:WP_011356102.1;Name=WP_011356102.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490496.1;locus_tag=LDO49_RS02880;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011356102.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 36521 37066 . + . ID=gene-LDO49_RS02885;Name=LDO49_RS02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02885;old_locus_tag=BCEP4_1130039 NZ_CAJZAV010000017.1 Protein Homology CDS 36521 37066 . + 0 ID=cds-WP_224051384.1;Parent=gene-LDO49_RS02885;Dbxref=GenBank:WP_224051384.1;Name=WP_224051384.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338657.1;locus_tag=LDO49_RS02885;product=RBBP9/YdeN family alpha/beta hydrolase;protein_id=WP_224051384.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 37233 38501 . + . ID=gene-LDO49_RS02890;Name=LDO49_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02890;old_locus_tag=BCEP4_1130040 NZ_CAJZAV010000017.1 Protein Homology CDS 37233 38501 . + 0 ID=cds-WP_224051385.1;Parent=gene-LDO49_RS02890;Dbxref=GenBank:WP_224051385.1;Name=WP_224051385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760142.1;locus_tag=LDO49_RS02890;product=YbfB/YjiJ family MFS transporter;protein_id=WP_224051385.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 38513 39058 . - . ID=gene-LDO49_RS02895;Name=hpaC;gbkey=Gene;gene=hpaC;gene_biotype=protein_coding;locus_tag=LDO49_RS02895;old_locus_tag=BCEP4_1130041 NZ_CAJZAV010000017.1 Protein Homology CDS 38513 39058 . - 0 ID=cds-WP_224051387.1;Parent=gene-LDO49_RS02895;Dbxref=GenBank:WP_224051387.1;Name=WP_224051387.1;Ontology_term=GO:0042537,GO:0016651,GO:0051287;gbkey=CDS;gene=hpaC;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,NAD binding|0051287||IEA;go_process=benzene-containing compound metabolic process|0042537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338655.1;locus_tag=LDO49_RS02895;product=4-hydroxyphenylacetate 3-monooxygenase%2C reductase component;protein_id=WP_224051387.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 39412 40044 . + . ID=gene-LDO49_RS02900;Name=LDO49_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02900;old_locus_tag=BCEP4_1130043 NZ_CAJZAV010000017.1 Protein Homology CDS 39412 40044 . + 0 ID=cds-WP_006479687.1;Parent=gene-LDO49_RS02900;Dbxref=GenBank:WP_006479687.1;Name=WP_006479687.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410569.1;locus_tag=LDO49_RS02900;product=response regulator transcription factor;protein_id=WP_006479687.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 40185 40928 . - . ID=gene-LDO49_RS02905;Name=LDO49_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02905;old_locus_tag=BCEP4_1130044 NZ_CAJZAV010000017.1 Protein Homology CDS 40185 40928 . - 0 ID=cds-WP_021161076.1;Parent=gene-LDO49_RS02905;Dbxref=GenBank:WP_021161076.1;Name=WP_021161076.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660265.1;locus_tag=LDO49_RS02905;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_021161076.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 40988 42112 . - . ID=gene-LDO49_RS02910;Name=LDO49_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02910;old_locus_tag=BCEP4_1130045 NZ_CAJZAV010000017.1 Protein Homology CDS 40988 42112 . - 0 ID=cds-WP_224051388.1;Parent=gene-LDO49_RS02910;Dbxref=GenBank:WP_224051388.1;Name=WP_224051388.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490494.1;locus_tag=LDO49_RS02910;product=amidase;protein_id=WP_224051388.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 42144 42677 . - . ID=gene-LDO49_RS02915;Name=LDO49_RS02915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02915;old_locus_tag=BCEP4_1130046 NZ_CAJZAV010000017.1 Protein Homology CDS 42144 42677 . - 0 ID=cds-WP_224051390.1;Parent=gene-LDO49_RS02915;Dbxref=GenBank:WP_224051390.1;Name=WP_224051390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694645.1;locus_tag=LDO49_RS02915;product=nuclear transport factor 2 family protein;protein_id=WP_224051390.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 42686 43063 . - . ID=gene-LDO49_RS02920;Name=LDO49_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02920;old_locus_tag=BCEP4_1130047 NZ_CAJZAV010000017.1 Protein Homology CDS 42686 43063 . - 0 ID=cds-WP_060319864.1;Parent=gene-LDO49_RS02920;Dbxref=GenBank:WP_060319864.1;Name=WP_060319864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397858.1;locus_tag=LDO49_RS02920;product=hypothetical protein;protein_id=WP_060319864.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 43177 44370 . - . ID=gene-LDO49_RS02925;Name=LDO49_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02925;old_locus_tag=BCEP4_1130048 NZ_CAJZAV010000017.1 Protein Homology CDS 43177 44370 . - 0 ID=cds-WP_021161072.1;Parent=gene-LDO49_RS02925;Dbxref=GenBank:WP_021161072.1;Name=WP_021161072.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415213.1;locus_tag=LDO49_RS02925;product=acyl-CoA dehydrogenase family protein;protein_id=WP_021161072.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 44537 46084 . + . ID=gene-LDO49_RS02930;Name=LDO49_RS02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02930;old_locus_tag=BCEP4_1130049 NZ_CAJZAV010000017.1 Protein Homology CDS 44537 46084 . + 0 ID=cds-WP_224051392.1;Parent=gene-LDO49_RS02930;Dbxref=GenBank:WP_224051392.1;Name=WP_224051392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479681.1;locus_tag=LDO49_RS02930;product=ATP-binding protein;protein_id=WP_224051392.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 46195 46581 . - . ID=gene-LDO49_RS02935;Name=LDO49_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02935;old_locus_tag=BCEP4_1130050 NZ_CAJZAV010000017.1 Protein Homology CDS 46195 46581 . - 0 ID=cds-WP_021161069.1;Parent=gene-LDO49_RS02935;Dbxref=GenBank:WP_021161069.1;Name=WP_021161069.1;Ontology_term=GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694648.1;locus_tag=LDO49_RS02935;product=2-hydroxymuconate tautomerase family protein;protein_id=WP_021161069.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 46761 47264 . - . ID=gene-LDO49_RS02940;Name=LDO49_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02940;old_locus_tag=BCEP4_1130051 NZ_CAJZAV010000017.1 Protein Homology CDS 46761 47264 . - 0 ID=cds-WP_021161068.1;Parent=gene-LDO49_RS02940;Dbxref=GenBank:WP_021161068.1;Name=WP_021161068.1;Ontology_term=GO:0008152,GO:0009056;gbkey=CDS;go_process=metabolic process|0008152||IEA,catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660272.1;locus_tag=LDO49_RS02940;product=aromatic-ring-hydroxylating dioxygenase subunit beta;protein_id=WP_021161068.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 47261 48544 . - . ID=gene-LDO49_RS02945;Name=LDO49_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02945;old_locus_tag=BCEP4_1130052 NZ_CAJZAV010000017.1 Protein Homology CDS 47261 48544 . - 0 ID=cds-WP_048020316.1;Parent=gene-LDO49_RS02945;Dbxref=GenBank:WP_048020316.1;Name=WP_048020316.1;Ontology_term=GO:0005506,GO:0016705,GO:0051537;gbkey=CDS;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483596.1;locus_tag=LDO49_RS02945;product=aromatic ring-hydroxylating oxygenase subunit alpha;protein_id=WP_048020316.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 48867 50201 . + . ID=gene-LDO49_RS02950;Name=LDO49_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02950;old_locus_tag=BCEP4_1130054 NZ_CAJZAV010000017.1 Protein Homology CDS 48867 50201 . + 0 ID=cds-WP_060222100.1;Parent=gene-LDO49_RS02950;Dbxref=GenBank:WP_060222100.1;Name=WP_060222100.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217590.1;locus_tag=LDO49_RS02950;product=MFS transporter;protein_id=WP_060222100.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 50264 51457 . + . ID=gene-LDO49_RS02955;Name=LDO49_RS02955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02955;old_locus_tag=BCEP4_1130053 NZ_CAJZAV010000017.1 Protein Homology CDS 50264 51457 . + 0 ID=cds-WP_059484712.1;Parent=gene-LDO49_RS02955;Dbxref=GenBank:WP_059484712.1;Name=WP_059484712.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404347.1;locus_tag=LDO49_RS02955;product=acyl-CoA dehydrogenase family protein;protein_id=WP_059484712.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 51496 52017 . + . ID=gene-LDO49_RS02960;Name=LDO49_RS02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02960;old_locus_tag=BCEP4_1130055 NZ_CAJZAV010000017.1 Protein Homology CDS 51496 52017 . + 0 ID=cds-WP_059589592.1;Parent=gene-LDO49_RS02960;Dbxref=GenBank:WP_059589592.1;Name=WP_059589592.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217588.1;locus_tag=LDO49_RS02960;product=flavin reductase;protein_id=WP_059589592.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 52021 52734 . + . ID=gene-LDO49_RS02965;Name=LDO49_RS02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02965;old_locus_tag=BCEP4_1130056 NZ_CAJZAV010000017.1 Protein Homology CDS 52021 52734 . + 0 ID=cds-WP_060229105.1;Parent=gene-LDO49_RS02965;Dbxref=GenBank:WP_060229105.1;Name=WP_060229105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217587.1;locus_tag=LDO49_RS02965;product=hypothetical protein;protein_id=WP_060229105.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 52800 53720 . + . ID=gene-LDO49_RS02970;Name=LDO49_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02970;old_locus_tag=BCEP4_1130057 NZ_CAJZAV010000017.1 Protein Homology CDS 52800 53720 . + 0 ID=cds-WP_192388844.1;Parent=gene-LDO49_RS02970;Dbxref=GenBank:WP_192388844.1;Name=WP_192388844.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217586.1;locus_tag=LDO49_RS02970;product=LysR family transcriptional regulator;protein_id=WP_192388844.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 53813 54733 . + . ID=gene-LDO49_RS02975;Name=LDO49_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02975;old_locus_tag=BCEP4_1130058 NZ_CAJZAV010000017.1 Protein Homology CDS 53813 54733 . + 0 ID=cds-WP_059494646.1;Parent=gene-LDO49_RS02975;Dbxref=GenBank:WP_059494646.1;Name=WP_059494646.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660274.1;locus_tag=LDO49_RS02975;product=LysR family transcriptional regulator;protein_id=WP_059494646.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 54905 55894 . - . ID=gene-LDO49_RS02980;Name=LDO49_RS02980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02980;old_locus_tag=BCEP4_1130059 NZ_CAJZAV010000017.1 Protein Homology CDS 54905 55894 . - 0 ID=cds-WP_224051393.1;Parent=gene-LDO49_RS02980;Dbxref=GenBank:WP_224051393.1;Name=WP_224051393.1;Ontology_term=GO:0010181,GO:0016491,GO:0046872,GO:0051537;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365410.1;locus_tag=LDO49_RS02980;product=PDR/VanB family oxidoreductase;protein_id=WP_224051393.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 56065 57462 . - . ID=gene-LDO49_RS02985;Name=LDO49_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02985;old_locus_tag=BCEP4_1130060 NZ_CAJZAV010000017.1 Protein Homology CDS 56065 57462 . - 0 ID=cds-WP_224051394.1;Parent=gene-LDO49_RS02985;Dbxref=GenBank:WP_224051394.1;Name=WP_224051394.1;Ontology_term=GO:0006869,GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=lipid transport|0006869||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356086.1;locus_tag=LDO49_RS02985;product=spinster family MFS transporter;protein_id=WP_224051394.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 57874 58992 . + . ID=gene-LDO49_RS02990;Name=LDO49_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02990;old_locus_tag=BCEP4_1130061 NZ_CAJZAV010000017.1 Protein Homology CDS 57874 58992 . + 0 ID=cds-WP_059484717.1;Parent=gene-LDO49_RS02990;Dbxref=GenBank:WP_059484717.1;Name=WP_059484717.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483607.1;locus_tag=LDO49_RS02990;product=porin;protein_id=WP_059484717.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 59040 60074 . - . ID=gene-LDO49_RS02995;Name=LDO49_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS02995;old_locus_tag=BCEP4_1130062 NZ_CAJZAV010000017.1 Protein Homology CDS 59040 60074 . - 0 ID=cds-WP_224051395.1;Parent=gene-LDO49_RS02995;Dbxref=GenBank:WP_224051395.1;Name=WP_224051395.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495633.1;locus_tag=LDO49_RS02995;product=LysR family transcriptional regulator;protein_id=WP_224051395.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 60071 61045 . - . ID=gene-LDO49_RS03000;Name=LDO49_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03000;old_locus_tag=BCEP4_1130063 NZ_CAJZAV010000017.1 Protein Homology CDS 60071 61045 . - 0 ID=cds-WP_224051396.1;Parent=gene-LDO49_RS03000;Dbxref=GenBank:WP_224051396.1;Name=WP_224051396.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217580.1;locus_tag=LDO49_RS03000;product=AraC family transcriptional regulator;protein_id=WP_224051396.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 61195 62301 . + . ID=gene-LDO49_RS03005;Name=LDO49_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03005;old_locus_tag=BCEP4_1130064 NZ_CAJZAV010000017.1 Protein Homology CDS 61195 62301 . + 0 ID=cds-WP_175894151.1;Parent=gene-LDO49_RS03005;Dbxref=GenBank:WP_175894151.1;Name=WP_175894151.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338640.1;locus_tag=LDO49_RS03005;product=NAD/NADP-dependent octopine/nopaline dehydrogenase family protein;protein_id=WP_175894151.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 62298 63308 . + . ID=gene-LDO49_RS03010;Name=LDO49_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03010;old_locus_tag=BCEP4_1130065 NZ_CAJZAV010000017.1 Protein Homology CDS 62298 63308 . + 0 ID=cds-WP_224051397.1;Parent=gene-LDO49_RS03010;Dbxref=GenBank:WP_224051397.1;Name=WP_224051397.1;Ontology_term=GO:0006631,GO:0016616,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548370.1;locus_tag=LDO49_RS03010;product=3-hydroxybutyryl-CoA dehydrogenase;protein_id=WP_224051397.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 63431 64795 . - . ID=gene-LDO49_RS03015;Name=LDO49_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03015;old_locus_tag=BCEP4_1130066 NZ_CAJZAV010000017.1 Protein Homology CDS 63431 64795 . - 0 ID=cds-WP_059494656.1;Parent=gene-LDO49_RS03015;Dbxref=GenBank:WP_059494656.1;Name=WP_059494656.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548369.1;locus_tag=LDO49_RS03015;product=MFS transporter;protein_id=WP_059494656.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 64962 66008 . - . ID=gene-LDO49_RS03020;Name=LDO49_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03020;old_locus_tag=BCEP4_1130067 NZ_CAJZAV010000017.1 Protein Homology CDS 64962 66008 . - 0 ID=cds-WP_048020295.1;Parent=gene-LDO49_RS03020;Dbxref=GenBank:WP_048020295.1;Name=WP_048020295.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548368.1;locus_tag=LDO49_RS03020;product=ABC transporter substrate-binding protein;protein_id=WP_048020295.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 66005 67156 . - . ID=gene-LDO49_RS03025;Name=LDO49_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03025;old_locus_tag=BCEP4_1130068 NZ_CAJZAV010000017.1 Protein Homology CDS 66005 67156 . - 0 ID=cds-WP_060306145.1;Parent=gene-LDO49_RS03025;Dbxref=GenBank:WP_060306145.1;Name=WP_060306145.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479669.1;locus_tag=LDO49_RS03025;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_060306145.1;transl_table=11 NZ_CAJZAV010000017.1 RefSeq gene 67217 67557 . - . ID=gene-LDO49_RS03030;Name=LDO49_RS03030;end_range=67557,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03030;old_locus_tag=BCEP4_1130069;partial=true;start_range=.,67217 NZ_CAJZAV010000017.1 Protein Homology CDS 67217 67557 . - 0 ID=cds-WP_443797897.1;Parent=gene-LDO49_RS03030;Dbxref=GenBank:WP_443797897.1;Name=WP_443797897.1;end_range=67557,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413190.1;locus_tag=LDO49_RS03030;partial=true;product=(2Fe-2S)-binding protein;protein_id=WP_443797897.1;start_range=.,67217;transl_table=11 ##sequence-region NZ_CAJZAV010000018.1 1 99715 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000018.1 RefSeq region 1 99715 . + . ID=NZ_CAJZAV010000018.1:1..99715;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_114 NZ_CAJZAV010000018.1 RefSeq gene 1 392 . - . ID=gene-LDO49_RS03035;Name=LDO49_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03035;partial=true;start_range=.,1 NZ_CAJZAV010000018.1 Protein Homology CDS 1 392 . - 0 ID=cds-WP_224051398.1;Parent=gene-LDO49_RS03035;Dbxref=GenBank:WP_224051398.1;Name=WP_224051398.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106698.1;locus_tag=LDO49_RS03035;partial=true;product=aminopeptidase P family N-terminal domain-containing protein;protein_id=WP_224051398.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 411 665 . - . ID=gene-LDO49_RS03040;Name=LDO49_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03040;old_locus_tag=BCEP4_1140002 NZ_CAJZAV010000018.1 Protein Homology CDS 411 665 . - 0 ID=cds-WP_021161784.1;Parent=gene-LDO49_RS03040;Dbxref=GenBank:WP_021161784.1;Name=WP_021161784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198580.1;locus_tag=LDO49_RS03040;product=hypothetical protein;protein_id=WP_021161784.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 837 1598 . + . ID=gene-LDO49_RS03045;Name=LDO49_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03045;old_locus_tag=BCEP4_1140003 NZ_CAJZAV010000018.1 Protein Homology CDS 837 1598 . + 0 ID=cds-WP_021161785.1;Parent=gene-LDO49_RS03045;Dbxref=GenBank:WP_021161785.1;Name=WP_021161785.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755624.1;locus_tag=LDO49_RS03045;product=response regulator transcription factor;protein_id=WP_021161785.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 1625 2923 . + . ID=gene-LDO49_RS03050;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=LDO49_RS03050;old_locus_tag=BCEP4_1140004 NZ_CAJZAV010000018.1 Protein Homology CDS 1625 2923 . + 0 ID=cds-WP_021161786.1;Parent=gene-LDO49_RS03050;Dbxref=GenBank:WP_021161786.1;Name=WP_021161786.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214219.1;locus_tag=LDO49_RS03050;product=glutamyl-tRNA reductase;protein_id=WP_021161786.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 3017 4099 . + . ID=gene-LDO49_RS03055;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=LDO49_RS03055;old_locus_tag=BCEP4_1140005 NZ_CAJZAV010000018.1 Protein Homology CDS 3017 4099 . + 0 ID=cds-WP_021161787.1;Parent=gene-LDO49_RS03055;Dbxref=GenBank:WP_021161787.1;Name=WP_021161787.1;Ontology_term=GO:0006415,GO:0016149;gbkey=CDS;gene=prfA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883134.1;locus_tag=LDO49_RS03055;product=peptide chain release factor 1;protein_id=WP_021161787.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 4107 4949 . + . ID=gene-LDO49_RS03060;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=LDO49_RS03060;old_locus_tag=BCEP4_1140006 NZ_CAJZAV010000018.1 Protein Homology CDS 4107 4949 . + 0 ID=cds-WP_224051400.1;Parent=gene-LDO49_RS03060;Dbxref=GenBank:WP_224051400.1;Name=WP_224051400.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350792.1;locus_tag=LDO49_RS03060;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_224051400.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 5017 5328 . + . ID=gene-LDO49_RS03065;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=LDO49_RS03065;old_locus_tag=BCEP4_1140007 NZ_CAJZAV010000018.1 Protein Homology CDS 5017 5328 . + 0 ID=cds-WP_021161789.1;Parent=gene-LDO49_RS03065;Dbxref=GenBank:WP_021161789.1;Name=WP_021161789.1;Ontology_term=GO:0009055;gbkey=CDS;gene=grxD;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018420101.1;locus_tag=LDO49_RS03065;product=Grx4 family monothiol glutaredoxin;protein_id=WP_021161789.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 5349 5945 . + . ID=gene-LDO49_RS03070;Name=LDO49_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03070;old_locus_tag=BCEP4_1140008 NZ_CAJZAV010000018.1 Protein Homology CDS 5349 5945 . + 0 ID=cds-WP_048023612.1;Parent=gene-LDO49_RS03070;Dbxref=GenBank:WP_048023612.1;Name=WP_048023612.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327818.1;locus_tag=LDO49_RS03070;product=UbiX family flavin prenyltransferase;protein_id=WP_048023612.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 6165 6956 . + . ID=gene-LDO49_RS03075;Name=LDO49_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03075;old_locus_tag=BCEP4_1140009 NZ_CAJZAV010000018.1 Protein Homology CDS 6165 6956 . + 0 ID=cds-WP_042976606.1;Parent=gene-LDO49_RS03075;Dbxref=GenBank:WP_042976606.1;Name=WP_042976606.1;Ontology_term=GO:0008270,GO:0016701,GO:0046872,GO:0051213;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen|0016701||IEA,metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362990.1;locus_tag=LDO49_RS03075;product=DODA-type extradiol aromatic ring-opening family dioxygenase;protein_id=WP_042976606.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 7067 8665 . - . ID=gene-LDO49_RS03080;Name=LDO49_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03080;old_locus_tag=BCEP4_1140010 NZ_CAJZAV010000018.1 Protein Homology CDS 7067 8665 . - 0 ID=cds-WP_021161792.1;Parent=gene-LDO49_RS03080;Dbxref=GenBank:WP_021161792.1;Name=WP_021161792.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186824.1;locus_tag=LDO49_RS03080;product=APC family permease;protein_id=WP_021161792.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 9086 9289 . + . ID=gene-LDO49_RS03085;Name=LDO49_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03085;old_locus_tag=BCEP4_1140012 NZ_CAJZAV010000018.1 Protein Homology CDS 9086 9289 . + 0 ID=cds-WP_006477070.1;Parent=gene-LDO49_RS03085;Dbxref=GenBank:WP_006477070.1;Name=WP_006477070.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196837.1;locus_tag=LDO49_RS03085;product=cold-shock protein;protein_id=WP_006477070.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 9390 10640 . - . ID=gene-LDO49_RS03090;Name=LDO49_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03090;old_locus_tag=BCEP4_1140013 NZ_CAJZAV010000018.1 Protein Homology CDS 9390 10640 . - 0 ID=cds-WP_021161794.1;Parent=gene-LDO49_RS03090;Dbxref=GenBank:WP_021161794.1;Name=WP_021161794.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414128.1;locus_tag=LDO49_RS03090;product=Hsp70 family protein;protein_id=WP_021161794.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 10827 11432 . - . ID=gene-LDO49_RS03095;Name=LDO49_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03095;old_locus_tag=BCEP4_1140014 NZ_CAJZAV010000018.1 Protein Homology CDS 10827 11432 . - 0 ID=cds-WP_021161795.1;Parent=gene-LDO49_RS03095;Dbxref=GenBank:WP_021161795.1;Name=WP_021161795.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350786.1;locus_tag=LDO49_RS03095;product=nitroreductase family protein;protein_id=WP_021161795.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 11598 12881 . - . ID=gene-LDO49_RS03100;Name=LDO49_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03100;old_locus_tag=BCEP4_1140015 NZ_CAJZAV010000018.1 Protein Homology CDS 11598 12881 . - 0 ID=cds-WP_224051402.1;Parent=gene-LDO49_RS03100;Dbxref=GenBank:WP_224051402.1;Name=WP_224051402.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909916.1;locus_tag=LDO49_RS03100;product=MFS transporter;protein_id=WP_224051402.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 13102 13722 . + . ID=gene-LDO49_RS03105;Name=LDO49_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03105;old_locus_tag=BCEP4_1140016 NZ_CAJZAV010000018.1 Protein Homology CDS 13102 13722 . + 0 ID=cds-WP_021161797.1;Parent=gene-LDO49_RS03105;Dbxref=GenBank:WP_021161797.1;Name=WP_021161797.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214227.1;locus_tag=LDO49_RS03105;product=TetR/AcrR family transcriptional regulator;protein_id=WP_021161797.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 13799 14371 . + . ID=gene-LDO49_RS03110;Name=LDO49_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03110;old_locus_tag=BCEP4_1140017 NZ_CAJZAV010000018.1 Protein Homology CDS 13799 14371 . + 0 ID=cds-WP_048023616.1;Parent=gene-LDO49_RS03110;Dbxref=GenBank:WP_048023616.1;Name=WP_048023616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333668.1;locus_tag=LDO49_RS03110;product=DUF1415 domain-containing protein;protein_id=WP_048023616.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 14448 15338 . - . ID=gene-LDO49_RS03115;Name=LDO49_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03115;old_locus_tag=BCEP4_1140018 NZ_CAJZAV010000018.1 Protein Homology CDS 14448 15338 . - 0 ID=cds-WP_021161799.1;Parent=gene-LDO49_RS03115;Dbxref=GenBank:WP_021161799.1;Name=WP_021161799.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327810.1;locus_tag=LDO49_RS03115;product=class I SAM-dependent methyltransferase;protein_id=WP_021161799.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 15428 16561 . - . ID=gene-LDO49_RS03120;Name=LDO49_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03120;old_locus_tag=BCEP4_1140019 NZ_CAJZAV010000018.1 Protein Homology CDS 15428 16561 . - 0 ID=cds-WP_060376736.1;Parent=gene-LDO49_RS03120;Dbxref=GenBank:WP_060376736.1;Name=WP_060376736.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898242.1;locus_tag=LDO49_RS03120;product=methyltransferase;protein_id=WP_060376736.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 16717 17049 . - . ID=gene-LDO49_RS03125;Name=LDO49_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03125;old_locus_tag=BCEP4_1140020 NZ_CAJZAV010000018.1 Protein Homology CDS 16717 17049 . - 0 ID=cds-WP_021161801.1;Parent=gene-LDO49_RS03125;Dbxref=GenBank:WP_021161801.1;Name=WP_021161801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008248293.1;locus_tag=LDO49_RS03125;product=YegP family protein;protein_id=WP_021161801.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 17197 17691 . - . ID=gene-LDO49_RS03130;Name=LDO49_RS03130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03130;old_locus_tag=BCEP4_1140021 NZ_CAJZAV010000018.1 Protein Homology CDS 17197 17691 . - 0 ID=cds-WP_042976607.1;Parent=gene-LDO49_RS03130;Dbxref=GenBank:WP_042976607.1;Name=WP_042976607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362981.1;locus_tag=LDO49_RS03130;product=LEA type 2 family protein;protein_id=WP_042976607.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 18332 20500 . + . ID=gene-LDO49_RS03135;Name=LDO49_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03135;old_locus_tag=BCEP4_1140024 NZ_CAJZAV010000018.1 Protein Homology CDS 18332 20500 . + 0 ID=cds-WP_021161803.1;Parent=gene-LDO49_RS03135;Dbxref=GenBank:WP_021161803.1;Name=WP_021161803.1;Ontology_term=GO:0006508,GO:0008233,GO:0008235,GO:0008270,GO:0046872;gbkey=CDS;go_function=peptidase activity|0008233||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350779.1;locus_tag=LDO49_RS03135;product=M1 family metallopeptidase;protein_id=WP_021161803.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 20655 21575 . - . ID=gene-LDO49_RS03140;Name=LDO49_RS03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03140;old_locus_tag=BCEP4_1140025 NZ_CAJZAV010000018.1 Protein Homology CDS 20655 21575 . - 0 ID=cds-WP_060320931.1;Parent=gene-LDO49_RS03140;Dbxref=GenBank:WP_060320931.1;Name=WP_060320931.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481915.1;locus_tag=LDO49_RS03140;product=LysR family transcriptional regulator;protein_id=WP_060320931.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 21737 22714 . + . ID=gene-LDO49_RS03145;Name=LDO49_RS03145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03145;old_locus_tag=BCEP4_1140026 NZ_CAJZAV010000018.1 Protein Homology CDS 21737 22714 . + 0 ID=cds-WP_059486500.1;Parent=gene-LDO49_RS03145;Dbxref=GenBank:WP_059486500.1;Name=WP_059486500.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554,GO:0048038;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350777.1;locus_tag=LDO49_RS03145;product=quinone oxidoreductase family protein;protein_id=WP_059486500.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq pseudogene 22739 22888 . + . ID=gene-LDO49_RS03150;Name=LDO49_RS03150;end_range=22888,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS03150;old_locus_tag=BCEP4_1140027;partial=true;pseudo=true NZ_CAJZAV010000018.1 Protein Homology CDS 22739 22888 . + 0 ID=cds-LDO49_RS03150;Parent=gene-LDO49_RS03150;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=22888,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018907130.1;locus_tag=LDO49_RS03150;partial=true;product=DUF1427 family protein;pseudo=true;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 22905 23930 . - . ID=gene-LDO49_RS03155;Name=LDO49_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03155;old_locus_tag=BCEP4_1140028 NZ_CAJZAV010000018.1 Protein Homology CDS 22905 23930 . - 0 ID=cds-WP_048023647.1;Parent=gene-LDO49_RS03155;Dbxref=GenBank:WP_048023647.1;Name=WP_048023647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753612.1;locus_tag=LDO49_RS03155;product=transporter;protein_id=WP_048023647.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 24137 25102 . - . ID=gene-LDO49_RS03160;Name=LDO49_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03160;old_locus_tag=BCEP4_1140029 NZ_CAJZAV010000018.1 Protein Homology CDS 24137 25102 . - 0 ID=cds-WP_059486502.1;Parent=gene-LDO49_RS03160;Dbxref=GenBank:WP_059486502.1;Name=WP_059486502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494415.1;locus_tag=LDO49_RS03160;product=hypothetical protein;protein_id=WP_059486502.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 25224 26069 . + . ID=gene-LDO49_RS03165;Name=LDO49_RS03165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03165;old_locus_tag=BCEP4_1140030 NZ_CAJZAV010000018.1 Protein Homology CDS 25224 26069 . + 0 ID=cds-WP_021161809.1;Parent=gene-LDO49_RS03165;Dbxref=GenBank:WP_021161809.1;Name=WP_021161809.1;Ontology_term=GO:0071554,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=cell wall organization or biogenesis|0071554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898247.1;locus_tag=LDO49_RS03165;product=M15 family metallopeptidase;protein_id=WP_021161809.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 26371 30315 . + . ID=gene-LDO49_RS03170;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=LDO49_RS03170;old_locus_tag=BCEP4_1140031 NZ_CAJZAV010000018.1 Protein Homology CDS 26371 30315 . + 0 ID=cds-WP_059486504.1;Parent=gene-LDO49_RS03170;Dbxref=GenBank:WP_059486504.1;Name=WP_059486504.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655832.1;locus_tag=LDO49_RS03170;product=type VI secretion system membrane subunit TssM;protein_id=WP_059486504.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 30312 31301 . + . ID=gene-LDO49_RS03175;Name=tagF;gbkey=Gene;gene=tagF;gene_biotype=protein_coding;locus_tag=LDO49_RS03175;old_locus_tag=BCEP4_1140032 NZ_CAJZAV010000018.1 Protein Homology CDS 30312 31301 . + 0 ID=cds-WP_021161811.1;Parent=gene-LDO49_RS03175;Dbxref=GenBank:WP_021161811.1;Name=WP_021161811.1;gbkey=CDS;gene=tagF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483243.1;locus_tag=LDO49_RS03175;product=type VI secretion system-associated protein TagF;protein_id=WP_021161811.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 31306 32235 . + . ID=gene-LDO49_RS03180;Name=LDO49_RS03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03180;old_locus_tag=BCEP4_1140033 NZ_CAJZAV010000018.1 Protein Homology CDS 31306 32235 . + 0 ID=cds-WP_059677142.1;Parent=gene-LDO49_RS03180;Dbxref=GenBank:WP_059677142.1;Name=WP_059677142.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333658.1;locus_tag=LDO49_RS03180;product=OmpA family protein;protein_id=WP_059677142.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 32321 33442 . - . ID=gene-LDO49_RS03185;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=LDO49_RS03185;old_locus_tag=BCEP4_1140034 NZ_CAJZAV010000018.1 Protein Homology CDS 32321 33442 . - 0 ID=cds-WP_021161813.1;Parent=gene-LDO49_RS03185;Dbxref=GenBank:WP_021161813.1;Name=WP_021161813.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350763.1;locus_tag=LDO49_RS03185;product=type VI secretion system protein TssA;protein_id=WP_021161813.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 33482 36151 . - . ID=gene-LDO49_RS03190;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=LDO49_RS03190;old_locus_tag=BCEP4_1140035 NZ_CAJZAV010000018.1 Protein Homology CDS 33482 36151 . - 0 ID=cds-WP_059859924.1;Parent=gene-LDO49_RS03190;Dbxref=GenBank:WP_059859924.1;Name=WP_059859924.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009967199.1;locus_tag=LDO49_RS03190;product=type VI secretion system ATPase TssH;protein_id=WP_059859924.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 36556 37656 . - . ID=gene-LDO49_RS03195;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LDO49_RS03195;old_locus_tag=BCEP4_1140036 NZ_CAJZAV010000018.1 Protein Homology CDS 36556 37656 . - 0 ID=cds-WP_021161816.1;Parent=gene-LDO49_RS03195;Dbxref=GenBank:WP_021161816.1;Name=WP_021161816.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010096521.1;locus_tag=LDO49_RS03195;product=type VI secretion system baseplate subunit TssG;protein_id=WP_021161816.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 37620 39455 . - . ID=gene-LDO49_RS03200;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LDO49_RS03200;old_locus_tag=BCEP4_1140037 NZ_CAJZAV010000018.1 Protein Homology CDS 37620 39455 . - 0 ID=cds-WP_060070294.1;Parent=gene-LDO49_RS03200;Dbxref=GenBank:WP_060070294.1;Name=WP_060070294.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484396.1;locus_tag=LDO49_RS03200;product=type VI secretion system baseplate subunit TssF;protein_id=WP_060070294.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 39533 40018 . - . ID=gene-LDO49_RS03205;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=LDO49_RS03205;old_locus_tag=BCEP4_1140038 NZ_CAJZAV010000018.1 Protein Homology CDS 39533 40018 . - 0 ID=cds-WP_021161818.1;Parent=gene-LDO49_RS03205;Dbxref=GenBank:WP_021161818.1;Name=WP_021161818.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883107.1;locus_tag=LDO49_RS03205;product=type VI secretion system baseplate subunit TssE;protein_id=WP_021161818.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 40081 40584 . - . ID=gene-LDO49_RS03210;Name=LDO49_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03210;old_locus_tag=BCEP4_1140039 NZ_CAJZAV010000018.1 Protein Homology CDS 40081 40584 . - 0 ID=cds-WP_006477093.1;Parent=gene-LDO49_RS03210;Dbxref=GenBank:WP_006477093.1;Name=WP_006477093.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883106.1;locus_tag=LDO49_RS03210;product=Hcp family type VI secretion system effector;protein_id=WP_006477093.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 40655 42145 . - . ID=gene-LDO49_RS03215;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=LDO49_RS03215;old_locus_tag=BCEP4_1140040 NZ_CAJZAV010000018.1 Protein Homology CDS 40655 42145 . - 0 ID=cds-WP_006477094.1;Parent=gene-LDO49_RS03215;Dbxref=GenBank:WP_006477094.1;Name=WP_006477094.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012426790.1;locus_tag=LDO49_RS03215;product=type VI secretion system contractile sheath large subunit;protein_id=WP_006477094.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 42161 42676 . - . ID=gene-LDO49_RS03220;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=LDO49_RS03220;old_locus_tag=BCEP4_1140041 NZ_CAJZAV010000018.1 Protein Homology CDS 42161 42676 . - 0 ID=cds-WP_027788514.1;Parent=gene-LDO49_RS03220;Dbxref=GenBank:WP_027788514.1;Name=WP_027788514.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106779.1;locus_tag=LDO49_RS03220;product=type VI secretion system contractile sheath small subunit;protein_id=WP_027788514.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 42723 43361 . - . ID=gene-LDO49_RS03225;Name=LDO49_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03225;old_locus_tag=BCEP4_1140042 NZ_CAJZAV010000018.1 Protein Homology CDS 42723 43361 . - 0 ID=cds-WP_059586933.1;Parent=gene-LDO49_RS03225;Dbxref=GenBank:WP_059586933.1;Name=WP_059586933.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883103.1;locus_tag=LDO49_RS03225;product=tetratricopeptide repeat protein;protein_id=WP_059586933.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 43735 44346 . + . ID=gene-LDO49_RS03230;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LDO49_RS03230;old_locus_tag=BCEP4_1140043 NZ_CAJZAV010000018.1 Protein Homology CDS 43735 44346 . + 0 ID=cds-WP_042976613.1;Parent=gene-LDO49_RS03230;Dbxref=GenBank:WP_042976613.1;Name=WP_042976613.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214251.1;locus_tag=LDO49_RS03230;product=type VI secretion system lipoprotein TssJ;protein_id=WP_042976613.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 44449 45795 . + . ID=gene-LDO49_RS03235;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LDO49_RS03235;old_locus_tag=BCEP4_1140044 NZ_CAJZAV010000018.1 Protein Homology CDS 44449 45795 . + 0 ID=cds-WP_011350756.1;Parent=gene-LDO49_RS03235;Dbxref=GenBank:WP_011350756.1;Name=WP_011350756.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409507.1;locus_tag=LDO49_RS03235;product=type VI secretion system baseplate subunit TssK;protein_id=WP_011350756.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 45792 46574 . + . ID=gene-LDO49_RS03240;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=LDO49_RS03240;old_locus_tag=BCEP4_1140045 NZ_CAJZAV010000018.1 Protein Homology CDS 45792 46574 . + 0 ID=cds-WP_021161821.1;Parent=gene-LDO49_RS03240;Dbxref=GenBank:WP_021161821.1;Name=WP_021161821.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106837.1;locus_tag=LDO49_RS03240;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_021161821.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 46667 47362 . - . ID=gene-LDO49_RS03245;Name=LDO49_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03245;old_locus_tag=BCEP4_1140046 NZ_CAJZAV010000018.1 Protein Homology CDS 46667 47362 . - 0 ID=cds-WP_060070291.1;Parent=gene-LDO49_RS03245;Dbxref=GenBank:WP_060070291.1;Name=WP_060070291.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049362.1;locus_tag=LDO49_RS03245;product=DUF7716 domain-containing protein;protein_id=WP_060070291.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 47359 47724 . - . ID=gene-LDO49_RS03250;Name=LDO49_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03250;old_locus_tag=BCEP4_1140047 NZ_CAJZAV010000018.1 Protein Homology CDS 47359 47724 . - 0 ID=cds-WP_059710374.1;Parent=gene-LDO49_RS03250;Dbxref=GenBank:WP_059710374.1;Name=WP_059710374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485334.1;locus_tag=LDO49_RS03250;product=immunity protein Imm33 domain-containing protein;protein_id=WP_059710374.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 47721 48161 . - . ID=gene-LDO49_RS03255;Name=LDO49_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03255;old_locus_tag=BCEP4_1140048 NZ_CAJZAV010000018.1 Protein Homology CDS 47721 48161 . - 0 ID=cds-WP_060070288.1;Parent=gene-LDO49_RS03255;Dbxref=GenBank:WP_060070288.1;Name=WP_060070288.1;Ontology_term=GO:0042546;gbkey=CDS;go_process=cell wall biogenesis|0042546||IEA;inference=COORDINATES: protein motif:HMM:NF025918.6;locus_tag=LDO49_RS03255;product=SMI1/KNR4 family protein;protein_id=WP_060070288.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 48214 48702 . - . ID=gene-LDO49_RS03260;Name=LDO49_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03260;old_locus_tag=BCEP4_1140049 NZ_CAJZAV010000018.1 Protein Homology CDS 48214 48702 . - 0 ID=cds-WP_060070285.1;Parent=gene-LDO49_RS03260;Dbxref=GenBank:WP_060070285.1;Name=WP_060070285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010401137.1;locus_tag=LDO49_RS03260;product=DUF4265 domain-containing protein;protein_id=WP_060070285.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 48806 49666 . - . ID=gene-LDO49_RS03265;Name=LDO49_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03265;old_locus_tag=BCEP4_1140050 NZ_CAJZAV010000018.1 GeneMarkS-2+ CDS 48806 49666 . - 0 ID=cds-WP_124475811.1;Parent=gene-LDO49_RS03265;Dbxref=GenBank:WP_124475811.1;Name=WP_124475811.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS03265;product=hypothetical protein;protein_id=WP_124475811.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 49676 49999 . - . ID=gene-LDO49_RS03270;Name=LDO49_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03270;old_locus_tag=BCEP4_1140051 NZ_CAJZAV010000018.1 Protein Homology CDS 49676 49999 . - 0 ID=cds-WP_060070278.1;Parent=gene-LDO49_RS03270;Dbxref=GenBank:WP_060070278.1;Name=WP_060070278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751243.1;locus_tag=LDO49_RS03270;product=DUF7716 domain-containing protein;protein_id=WP_060070278.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 50259 50585 . - . ID=gene-LDO49_RS03275;Name=LDO49_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03275;old_locus_tag=BCEP4_1140052 NZ_CAJZAV010000018.1 GeneMarkS-2+ CDS 50259 50585 . - 0 ID=cds-WP_124537213.1;Parent=gene-LDO49_RS03275;Dbxref=GenBank:WP_124537213.1;Name=WP_124537213.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS03275;product=hypothetical protein;protein_id=WP_124537213.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 51176 51484 . - . ID=gene-LDO49_RS03285;Name=LDO49_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03285;old_locus_tag=BCEP4_1140054 NZ_CAJZAV010000018.1 Protein Homology CDS 51176 51484 . - 0 ID=cds-WP_059486524.1;Parent=gene-LDO49_RS03285;Dbxref=GenBank:WP_059486524.1;Name=WP_059486524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751245.1;locus_tag=LDO49_RS03285;product=hypothetical protein;protein_id=WP_059486524.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq pseudogene 51848 51978 . + . ID=gene-LDO49_RS03290;Name=LDO49_RS03290;end_range=51978,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS03290;partial=true;pseudo=true NZ_CAJZAV010000018.1 Protein Homology CDS 51848 51978 . + 0 ID=cds-LDO49_RS03290;Parent=gene-LDO49_RS03290;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=51978,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217389.1;locus_tag=LDO49_RS03290;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 52327 53127 . + . ID=gene-LDO49_RS03295;Name=LDO49_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03295;old_locus_tag=BCEP4_1140057 NZ_CAJZAV010000018.1 Protein Homology CDS 52327 53127 . + 0 ID=cds-WP_059486527.1;Parent=gene-LDO49_RS03295;Dbxref=GenBank:WP_059486527.1;Name=WP_059486527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765337.1;locus_tag=LDO49_RS03295;product=transporter substrate-binding domain-containing protein;protein_id=WP_059486527.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 53188 53391 . - . ID=gene-LDO49_RS03300;Name=LDO49_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03300;old_locus_tag=BCEP4_1140058 NZ_CAJZAV010000018.1 Protein Homology CDS 53188 53391 . - 0 ID=cds-WP_027788527.1;Parent=gene-LDO49_RS03300;Dbxref=GenBank:WP_027788527.1;Name=WP_027788527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485326.1;locus_tag=LDO49_RS03300;product=hypothetical protein;protein_id=WP_027788527.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 53746 54288 . - . ID=gene-LDO49_RS03305;Name=LDO49_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03305;old_locus_tag=BCEP4_1140059 NZ_CAJZAV010000018.1 Protein Homology CDS 53746 54288 . - 0 ID=cds-WP_060070275.1;Parent=gene-LDO49_RS03305;Dbxref=GenBank:WP_060070275.1;Name=WP_060070275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004551629.1;locus_tag=LDO49_RS03305;product=hypothetical protein;protein_id=WP_060070275.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 54703 55788 . + . ID=gene-LDO49_RS03310;Name=LDO49_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03310;old_locus_tag=BCEP4_1140060 NZ_CAJZAV010000018.1 Protein Homology CDS 54703 55788 . + 0 ID=cds-WP_081065234.1;Parent=gene-LDO49_RS03310;Dbxref=GenBank:WP_081065234.1;Name=WP_081065234.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009976388.1;locus_tag=LDO49_RS03310;product=sensor histidine kinase;protein_id=WP_081065234.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 55790 56524 . + . ID=gene-LDO49_RS03315;Name=LDO49_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03315;old_locus_tag=BCEP4_1140061 NZ_CAJZAV010000018.1 Protein Homology CDS 55790 56524 . + 0 ID=cds-WP_021161836.1;Parent=gene-LDO49_RS03315;Dbxref=GenBank:WP_021161836.1;Name=WP_021161836.1;Ontology_term=GO:0000160,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004528244.1;locus_tag=LDO49_RS03315;product=LytR/AlgR family response regulator transcription factor;protein_id=WP_021161836.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 56689 57303 . + . ID=gene-LDO49_RS03320;Name=LDO49_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03320;old_locus_tag=BCEP4_1140062 NZ_CAJZAV010000018.1 GeneMarkS-2+ CDS 56689 57303 . + 0 ID=cds-WP_124475673.1;Parent=gene-LDO49_RS03320;Dbxref=GenBank:WP_124475673.1;Name=WP_124475673.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS03320;product=hypothetical protein;protein_id=WP_124475673.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 57425 57682 . - . ID=gene-LDO49_RS03325;Name=LDO49_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03325;old_locus_tag=BCEP4_1140063 NZ_CAJZAV010000018.1 Protein Homology CDS 57425 57682 . - 0 ID=cds-WP_080741844.1;Parent=gene-LDO49_RS03325;Dbxref=GenBank:WP_080741844.1;Name=WP_080741844.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894667.1;locus_tag=LDO49_RS03325;product=PAAR domain-containing protein;protein_id=WP_080741844.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 57697 59040 . - . ID=gene-LDO49_RS03330;Name=LDO49_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03330;old_locus_tag=BCEP4_1140064 NZ_CAJZAV010000018.1 Protein Homology CDS 57697 59040 . - 0 ID=cds-WP_372585824.1;Parent=gene-LDO49_RS03330;Dbxref=GenBank:WP_372585824.1;Name=WP_372585824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365269.1;locus_tag=LDO49_RS03330;product=virulence factor;protein_id=WP_372585824.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 59736 59936 . - . ID=gene-LDO49_RS03335;Name=LDO49_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03335;old_locus_tag=BCEP4_1140067 NZ_CAJZAV010000018.1 GeneMarkS-2+ CDS 59736 59936 . - 0 ID=cds-WP_060147557.1;Parent=gene-LDO49_RS03335;Dbxref=GenBank:WP_060147557.1;Name=WP_060147557.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS03335;product=hypothetical protein;protein_id=WP_060147557.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 60276 60896 . + . ID=gene-LDO49_RS03340;Name=LDO49_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03340;old_locus_tag=BCEP4_1140068 NZ_CAJZAV010000018.1 GeneMarkS-2+ CDS 60276 60896 . + 0 ID=cds-WP_224051404.1;Parent=gene-LDO49_RS03340;Dbxref=GenBank:WP_224051404.1;Name=WP_224051404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS03340;product=hypothetical protein;protein_id=WP_224051404.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 61215 61727 . + . ID=gene-LDO49_RS03345;Name=LDO49_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03345;old_locus_tag=BCEP4_1140070 NZ_CAJZAV010000018.1 GeneMarkS-2+ CDS 61215 61727 . + 0 ID=cds-WP_224051405.1;Parent=gene-LDO49_RS03345;Dbxref=GenBank:WP_224051405.1;Name=WP_224051405.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS03345;product=hypothetical protein;protein_id=WP_224051405.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 61747 62322 . - . ID=gene-LDO49_RS03350;Name=LDO49_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03350;old_locus_tag=BCEP4_1140071 NZ_CAJZAV010000018.1 Protein Homology CDS 61747 62322 . - 0 ID=cds-WP_224051407.1;Parent=gene-LDO49_RS03350;Dbxref=GenBank:WP_224051407.1;Name=WP_224051407.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009911645.1;locus_tag=LDO49_RS03350;product=recombinase family protein;protein_id=WP_224051407.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 62458 63219 . + . ID=gene-LDO49_RS03355;Name=LDO49_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03355;old_locus_tag=BCEP4_1140072;partial=true;start_range=.,62458 NZ_CAJZAV010000018.1 Protein Homology CDS 62458 63219 . + 0 ID=cds-WP_224051421.1;Parent=gene-LDO49_RS03355;Dbxref=GenBank:WP_224051421.1;Name=WP_224051421.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_062799617.1;locus_tag=LDO49_RS03355;partial=true;product=IS30 family transposase;protein_id=WP_224051421.1;start_range=.,62458;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 63364 65793 . - . ID=gene-LDO49_RS03360;Name=LDO49_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03360;old_locus_tag=BCEP4_1140073 NZ_CAJZAV010000018.1 Protein Homology CDS 63364 65793 . - 0 ID=cds-WP_224051409.1;Parent=gene-LDO49_RS03360;Dbxref=GenBank:WP_224051409.1;Name=WP_224051409.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024685.6;locus_tag=LDO49_RS03360;product=SIR2 family protein;protein_id=WP_224051409.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 66082 66780 . + . ID=gene-LDO49_RS03365;Name=LDO49_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03365;old_locus_tag=BCEP4_1140075 NZ_CAJZAV010000018.1 GeneMarkS-2+ CDS 66082 66780 . + 0 ID=cds-WP_224051410.1;Parent=gene-LDO49_RS03365;Dbxref=GenBank:WP_224051410.1;Name=WP_224051410.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS03365;product=hypothetical protein;protein_id=WP_224051410.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 66944 67111 . + . ID=gene-LDO49_RS03370;Name=LDO49_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03370;old_locus_tag=BCEP4_1140077 NZ_CAJZAV010000018.1 Protein Homology CDS 66944 67111 . + 0 ID=cds-WP_308043776.1;Parent=gene-LDO49_RS03370;Dbxref=GenBank:WP_308043776.1;Name=WP_308043776.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF017717.6;locus_tag=LDO49_RS03370;product=helix-turn-helix transcriptional regulator;protein_id=WP_308043776.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 67387 67650 . + . ID=gene-LDO49_RS03375;Name=LDO49_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03375 NZ_CAJZAV010000018.1 GeneMarkS-2+ CDS 67387 67650 . + 0 ID=cds-WP_224051414.1;Parent=gene-LDO49_RS03375;Dbxref=GenBank:WP_224051414.1;Name=WP_224051414.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS03375;product=hypothetical protein;protein_id=WP_224051414.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 67979 68155 . + . ID=gene-LDO49_RS03380;Name=LDO49_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03380 NZ_CAJZAV010000018.1 Protein Homology CDS 67979 68155 . + 0 ID=cds-WP_017432173.1;Parent=gene-LDO49_RS03380;Dbxref=GenBank:WP_017432173.1;Name=WP_017432173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906782.1;locus_tag=LDO49_RS03380;product=hypothetical protein;protein_id=WP_017432173.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 68148 68450 . + . ID=gene-LDO49_RS03385;Name=LDO49_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03385;old_locus_tag=BCEP4_1140079 NZ_CAJZAV010000018.1 Protein Homology CDS 68148 68450 . + 0 ID=cds-WP_224051415.1;Parent=gene-LDO49_RS03385;Dbxref=GenBank:WP_224051415.1;Name=WP_224051415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908644.1;locus_tag=LDO49_RS03385;product=hypothetical protein;protein_id=WP_224051415.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 68443 68655 . + . ID=gene-LDO49_RS03390;Name=LDO49_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03390;old_locus_tag=BCEP4_1140080 NZ_CAJZAV010000018.1 Protein Homology CDS 68443 68655 . + 0 ID=cds-WP_004522499.1;Parent=gene-LDO49_RS03390;Dbxref=GenBank:WP_004522499.1;Name=WP_004522499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522499.1;locus_tag=LDO49_RS03390;product=hypothetical protein;protein_id=WP_004522499.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 68648 68995 . + . ID=gene-LDO49_RS03395;Name=LDO49_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03395;old_locus_tag=BCEP4_1140081 NZ_CAJZAV010000018.1 Protein Homology CDS 68648 68995 . + 0 ID=cds-WP_014722320.1;Parent=gene-LDO49_RS03395;Dbxref=GenBank:WP_014722320.1;Name=WP_014722320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522498.1;locus_tag=LDO49_RS03395;product=hypothetical protein;protein_id=WP_014722320.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 69005 69331 . + . ID=gene-LDO49_RS03400;Name=LDO49_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03400;old_locus_tag=BCEP4_1140082 NZ_CAJZAV010000018.1 Protein Homology CDS 69005 69331 . + 0 ID=cds-WP_009908646.1;Parent=gene-LDO49_RS03400;Dbxref=GenBank:WP_009908646.1;Name=WP_009908646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010111962.1;locus_tag=LDO49_RS03400;product=hypothetical protein;protein_id=WP_009908646.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 69459 72320 . + . ID=gene-LDO49_RS03405;Name=LDO49_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03405;old_locus_tag=BCEP4_1140083 NZ_CAJZAV010000018.1 Protein Homology CDS 69459 72320 . + 0 ID=cds-WP_224051416.1;Parent=gene-LDO49_RS03405;Dbxref=GenBank:WP_224051416.1;Name=WP_224051416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758148.1;locus_tag=LDO49_RS03405;product=DUF927 domain-containing protein;protein_id=WP_224051416.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 72937 74154 . - . ID=gene-LDO49_RS03410;Name=LDO49_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03410;old_locus_tag=BCEP4_1140085 NZ_CAJZAV010000018.1 Protein Homology CDS 72937 74154 . - 0 ID=cds-WP_224051417.1;Parent=gene-LDO49_RS03410;Dbxref=GenBank:WP_224051417.1;Name=WP_224051417.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722318.1;locus_tag=LDO49_RS03410;product=tyrosine-type recombinase/integrase;protein_id=WP_224051417.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 74329 74404 . - . ID=gene-LDO49_RS03415;Name=LDO49_RS03415;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS03415;old_locus_tag=BCEP4_TRNA32 NZ_CAJZAV010000018.1 tRNAscan-SE tRNA 74329 74404 . - . ID=rna-LDO49_RS03415;Parent=gene-LDO49_RS03415;anticodon=(pos:complement(74369..74371));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS03415;product=tRNA-Thr NZ_CAJZAV010000018.1 tRNAscan-SE exon 74329 74404 . - . ID=exon-LDO49_RS03415-1;Parent=rna-LDO49_RS03415;anticodon=(pos:complement(74369..74371));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS03415;product=tRNA-Thr NZ_CAJZAV010000018.1 RefSeq gene 74423 74950 . - . ID=gene-LDO49_RS03420;Name=LDO49_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03420;old_locus_tag=BCEP4_1140086 NZ_CAJZAV010000018.1 Protein Homology CDS 74423 74950 . - 0 ID=cds-WP_060070263.1;Parent=gene-LDO49_RS03420;Dbxref=GenBank:WP_060070263.1;Name=WP_060070263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412425.1;locus_tag=LDO49_RS03420;product=ClpXP protease specificity-enhancing factor;protein_id=WP_060070263.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 75022 75633 . - . ID=gene-LDO49_RS03425;Name=LDO49_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03425;old_locus_tag=BCEP4_1140087 NZ_CAJZAV010000018.1 Protein Homology CDS 75022 75633 . - 0 ID=cds-WP_006400565.1;Parent=gene-LDO49_RS03425;Dbxref=GenBank:WP_006400565.1;Name=WP_006400565.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006999756.1;locus_tag=LDO49_RS03425;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_006400565.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 75727 76485 . - . ID=gene-LDO49_RS03430;Name=LDO49_RS03430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03430;old_locus_tag=BCEP4_1140088 NZ_CAJZAV010000018.1 Protein Homology CDS 75727 76485 . - 0 ID=cds-WP_021161843.1;Parent=gene-LDO49_RS03430;Dbxref=GenBank:WP_021161843.1;Name=WP_021161843.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199892.1;locus_tag=LDO49_RS03430;product=cytochrome c1;protein_id=WP_021161843.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 76507 77889 . - . ID=gene-LDO49_RS03435;Name=LDO49_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03435;old_locus_tag=BCEP4_1140089 NZ_CAJZAV010000018.1 Protein Homology CDS 76507 77889 . - 0 ID=cds-WP_124475672.1;Parent=gene-LDO49_RS03435;Dbxref=GenBank:WP_124475672.1;Name=WP_124475672.1;Ontology_term=GO:0022904,GO:0008121,GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=quinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199894.1;locus_tag=LDO49_RS03435;product=cytochrome b;protein_id=WP_124475672.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 77886 78506 . - . ID=gene-LDO49_RS03440;Name=petA;gbkey=Gene;gene=petA;gene_biotype=protein_coding;locus_tag=LDO49_RS03440;old_locus_tag=BCEP4_1140090 NZ_CAJZAV010000018.1 Protein Homology CDS 77886 78506 . - 0 ID=cds-WP_011350741.1;Parent=gene-LDO49_RS03440;Dbxref=GenBank:WP_011350741.1;Name=WP_011350741.1;Ontology_term=GO:0009060,GO:0008121,GO:0009055,GO:0045275;gbkey=CDS;gene=petA;go_component=respiratory chain complex III|0045275||IEA;go_function=quinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA;go_process=aerobic respiration|0009060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491868.1;locus_tag=LDO49_RS03440;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;protein_id=WP_011350741.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 78725 79471 . - . ID=gene-LDO49_RS03445;Name=LDO49_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03445;old_locus_tag=BCEP4_1140091 NZ_CAJZAV010000018.1 Protein Homology CDS 78725 79471 . - 0 ID=cds-WP_048026516.1;Parent=gene-LDO49_RS03445;Dbxref=GenBank:WP_048026516.1;Name=WP_048026516.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906350.1;locus_tag=LDO49_RS03445;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_048026516.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 79493 80698 . + . ID=gene-LDO49_RS03450;Name=LDO49_RS03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03450;old_locus_tag=BCEP4_1140092 NZ_CAJZAV010000018.1 Protein Homology CDS 79493 80698 . + 0 ID=cds-WP_021161847.1;Parent=gene-LDO49_RS03450;Dbxref=GenBank:WP_021161847.1;Name=WP_021161847.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751792.1;locus_tag=LDO49_RS03450;product=Do family serine endopeptidase;protein_id=WP_021161847.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 80904 81692 . - . ID=gene-LDO49_RS03455;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=LDO49_RS03455;old_locus_tag=BCEP4_1140093 NZ_CAJZAV010000018.1 Protein Homology CDS 80904 81692 . - 0 ID=cds-WP_059491977.1;Parent=gene-LDO49_RS03455;Dbxref=GenBank:WP_059491977.1;Name=WP_059491977.1;Ontology_term=GO:0015628,GO:0005886;gbkey=CDS;gene=tatC;go_component=plasma membrane|0005886||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477113.1;locus_tag=LDO49_RS03455;product=twin-arginine translocase subunit TatC;protein_id=WP_059491977.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 81734 82264 . - . ID=gene-LDO49_RS03460;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=LDO49_RS03460;old_locus_tag=BCEP4_1140094 NZ_CAJZAV010000018.1 Protein Homology CDS 81734 82264 . - 0 ID=cds-WP_059491978.1;Parent=gene-LDO49_RS03460;Dbxref=GenBank:WP_059491978.1;Name=WP_059491978.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477114.1;locus_tag=LDO49_RS03460;product=Sec-independent protein translocase protein TatB;protein_id=WP_059491978.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 82291 82521 . - . ID=gene-LDO49_RS03465;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=LDO49_RS03465;old_locus_tag=BCEP4_1140095 NZ_CAJZAV010000018.1 Protein Homology CDS 82291 82521 . - 0 ID=cds-WP_021161850.1;Parent=gene-LDO49_RS03465;Dbxref=GenBank:WP_021161850.1;Name=WP_021161850.1;Ontology_term=GO:0043953,GO:0016020;gbkey=CDS;gene=tatA;go_component=membrane|0016020||IEA;go_process=protein transport by the Tat complex|0043953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477115.1;locus_tag=LDO49_RS03465;product=Sec-independent protein translocase subunit TatA;protein_id=WP_021161850.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 82615 82980 . - . ID=gene-LDO49_RS03470;Name=LDO49_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03470;old_locus_tag=BCEP4_1140096 NZ_CAJZAV010000018.1 Protein Homology CDS 82615 82980 . - 0 ID=cds-WP_021161851.1;Parent=gene-LDO49_RS03470;Dbxref=GenBank:WP_021161851.1;Name=WP_021161851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185206.1;locus_tag=LDO49_RS03470;product=histidine triad nucleotide-binding protein;protein_id=WP_021161851.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 83012 83404 . - . ID=gene-LDO49_RS03475;Name=LDO49_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03475;old_locus_tag=BCEP4_1140097 NZ_CAJZAV010000018.1 Protein Homology CDS 83012 83404 . - 0 ID=cds-WP_224051418.1;Parent=gene-LDO49_RS03475;Dbxref=GenBank:WP_224051418.1;Name=WP_224051418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199903.1;locus_tag=LDO49_RS03475;product=DUF4870 family protein;protein_id=WP_224051418.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 83473 83838 . - . ID=gene-LDO49_RS03480;Name=LDO49_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03480;old_locus_tag=BCEP4_1140098 NZ_CAJZAV010000018.1 Protein Homology CDS 83473 83838 . - 0 ID=cds-WP_006485344.1;Parent=gene-LDO49_RS03480;Dbxref=GenBank:WP_006485344.1;Name=WP_006485344.1;Ontology_term=GO:0000105,GO:0004636;gbkey=CDS;go_function=phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883060.1;locus_tag=LDO49_RS03480;product=phosphoribosyl-ATP diphosphatase;protein_id=WP_006485344.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 83835 84251 . - . ID=gene-LDO49_RS03485;Name=hisI;gbkey=Gene;gene=hisI;gene_biotype=protein_coding;locus_tag=LDO49_RS03485;old_locus_tag=BCEP4_1140099 NZ_CAJZAV010000018.1 Protein Homology CDS 83835 84251 . - 0 ID=cds-WP_021161852.1;Parent=gene-LDO49_RS03485;Dbxref=GenBank:WP_021161852.1;Name=WP_021161852.1;Ontology_term=GO:0000105,GO:0004635;gbkey=CDS;gene=hisI;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494429.1;locus_tag=LDO49_RS03485;product=phosphoribosyl-AMP cyclohydrolase;protein_id=WP_021161852.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 84251 85024 . - . ID=gene-LDO49_RS03490;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=LDO49_RS03490;old_locus_tag=BCEP4_1140100 NZ_CAJZAV010000018.1 Protein Homology CDS 84251 85024 . - 0 ID=cds-WP_011350732.1;Parent=gene-LDO49_RS03490;Dbxref=GenBank:WP_011350732.1;Name=WP_011350732.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362933.1;locus_tag=LDO49_RS03490;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_011350732.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 85131 85886 . - . ID=gene-LDO49_RS03495;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=LDO49_RS03495;old_locus_tag=BCEP4_1140101 NZ_CAJZAV010000018.1 Protein Homology CDS 85131 85886 . - 0 ID=cds-WP_021161854.1;Parent=gene-LDO49_RS03495;Dbxref=GenBank:WP_021161854.1;Name=WP_021161854.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883057.1;locus_tag=LDO49_RS03495;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_021161854.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 86050 86691 . - . ID=gene-LDO49_RS03500;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=LDO49_RS03500;old_locus_tag=BCEP4_1140102 NZ_CAJZAV010000018.1 Protein Homology CDS 86050 86691 . - 0 ID=cds-WP_034189815.1;Parent=gene-LDO49_RS03500;Dbxref=GenBank:WP_034189815.1;Name=WP_034189815.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180210.1;locus_tag=LDO49_RS03500;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_034189815.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 86688 87308 . - . ID=gene-LDO49_RS03505;Name=LDO49_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03505;old_locus_tag=BCEP4_1140103 NZ_CAJZAV010000018.1 Protein Homology CDS 86688 87308 . - 0 ID=cds-WP_021161856.1;Parent=gene-LDO49_RS03505;Dbxref=GenBank:WP_021161856.1;Name=WP_021161856.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092886.1;locus_tag=LDO49_RS03505;product=MarC family protein;protein_id=WP_021161856.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 87375 87962 . - . ID=gene-LDO49_RS03510;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=LDO49_RS03510;old_locus_tag=BCEP4_1140104 NZ_CAJZAV010000018.1 Protein Homology CDS 87375 87962 . - 0 ID=cds-WP_011350728.1;Parent=gene-LDO49_RS03510;Dbxref=GenBank:WP_011350728.1;Name=WP_011350728.1;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400582.1;locus_tag=LDO49_RS03510;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_011350728.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 88028 89101 . - . ID=gene-LDO49_RS03515;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=LDO49_RS03515;old_locus_tag=BCEP4_1140105 NZ_CAJZAV010000018.1 Protein Homology CDS 88028 89101 . - 0 ID=cds-WP_048026519.1;Parent=gene-LDO49_RS03515;Dbxref=GenBank:WP_048026519.1;Name=WP_048026519.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765369.1;locus_tag=LDO49_RS03515;product=histidinol-phosphate transaminase;protein_id=WP_048026519.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 89247 90563 . - . ID=gene-LDO49_RS03520;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=LDO49_RS03520;old_locus_tag=BCEP4_1140106 NZ_CAJZAV010000018.1 Protein Homology CDS 89247 90563 . - 0 ID=cds-WP_021161858.1;Parent=gene-LDO49_RS03520;Dbxref=GenBank:WP_021161858.1;Name=WP_021161858.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350726.1;locus_tag=LDO49_RS03520;product=histidinol dehydrogenase;protein_id=WP_021161858.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 90588 91241 . - . ID=gene-LDO49_RS03525;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=LDO49_RS03525;old_locus_tag=BCEP4_1140107 NZ_CAJZAV010000018.1 Protein Homology CDS 90588 91241 . - 0 ID=cds-WP_027788540.1;Parent=gene-LDO49_RS03525;Dbxref=GenBank:WP_027788540.1;Name=WP_027788540.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327780.1;locus_tag=LDO49_RS03525;product=ATP phosphoribosyltransferase;protein_id=WP_027788540.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 91250 92599 . - . ID=gene-LDO49_RS03530;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=LDO49_RS03530;old_locus_tag=BCEP4_1140108 NZ_CAJZAV010000018.1 Protein Homology CDS 91250 92599 . - 0 ID=cds-WP_224051419.1;Parent=gene-LDO49_RS03530;Dbxref=GenBank:WP_224051419.1;Name=WP_224051419.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041492724.1;locus_tag=LDO49_RS03530;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_224051419.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 92614 92853 . - . ID=gene-LDO49_RS03535;Name=LDO49_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03535;old_locus_tag=BCEP4_1140109 NZ_CAJZAV010000018.1 Protein Homology CDS 92614 92853 . - 0 ID=cds-WP_006477131.1;Parent=gene-LDO49_RS03535;Dbxref=GenBank:WP_006477131.1;Name=WP_006477131.1;Ontology_term=GO:0051604,GO:0051536,GO:1990229;gbkey=CDS;go_component=iron-sulfur cluster assembly complex|1990229||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029348.1;locus_tag=LDO49_RS03535;product=BolA family protein;protein_id=WP_006477131.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 92910 93665 . - . ID=gene-LDO49_RS03540;Name=LDO49_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03540;old_locus_tag=BCEP4_1140110 NZ_CAJZAV010000018.1 Protein Homology CDS 92910 93665 . - 0 ID=cds-WP_048026521.1;Parent=gene-LDO49_RS03540;Dbxref=GenBank:WP_048026521.1;Name=WP_048026521.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696427.1;locus_tag=LDO49_RS03540;product=ABC transporter permease;protein_id=WP_048026521.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 93662 94588 . - . ID=gene-LDO49_RS03545;Name=LDO49_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03545;old_locus_tag=BCEP4_1140111 NZ_CAJZAV010000018.1 Protein Homology CDS 93662 94588 . - 0 ID=cds-WP_021161862.1;Parent=gene-LDO49_RS03545;Dbxref=GenBank:WP_021161862.1;Name=WP_021161862.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440405.1;locus_tag=LDO49_RS03545;product=ABC transporter ATP-binding protein;protein_id=WP_021161862.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 94781 95056 . - . ID=gene-LDO49_RS03550;Name=LDO49_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03550;old_locus_tag=BCEP4_1140113 NZ_CAJZAV010000018.1 Protein Homology CDS 94781 95056 . - 0 ID=cds-WP_027788544.1;Parent=gene-LDO49_RS03550;Dbxref=GenBank:WP_027788544.1;Name=WP_027788544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602125.1;locus_tag=LDO49_RS03550;product=STAS domain-containing protein;protein_id=WP_027788544.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 95053 95682 . - . ID=gene-LDO49_RS03555;Name=LDO49_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03555;old_locus_tag=BCEP4_1140114 NZ_CAJZAV010000018.1 Protein Homology CDS 95053 95682 . - 0 ID=cds-WP_042976633.1;Parent=gene-LDO49_RS03555;Dbxref=GenBank:WP_042976633.1;Name=WP_042976633.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106880.1;locus_tag=LDO49_RS03555;product=MlaC/ttg2D family ABC transporter substrate-binding protein;protein_id=WP_042976633.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 95794 96732 . - . ID=gene-LDO49_RS03560;Name=LDO49_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03560;old_locus_tag=BCEP4_1140115 NZ_CAJZAV010000018.1 Protein Homology CDS 95794 96732 . - 0 ID=cds-WP_059484008.1;Parent=gene-LDO49_RS03560;Dbxref=GenBank:WP_059484008.1;Name=WP_059484008.1;Ontology_term=GO:0120010,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=intermembrane phospholipid transfer|0120010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362925.1;locus_tag=LDO49_RS03560;product=MlaA family lipoprotein;protein_id=WP_059484008.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 96764 97327 . - . ID=gene-LDO49_RS03565;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=LDO49_RS03565;old_locus_tag=BCEP4_1140116 NZ_CAJZAV010000018.1 Protein Homology CDS 96764 97327 . - 0 ID=cds-WP_048026531.1;Parent=gene-LDO49_RS03565;Dbxref=GenBank:WP_048026531.1;Name=WP_048026531.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655797.1;locus_tag=LDO49_RS03565;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_048026531.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 97358 98125 . - . ID=gene-LDO49_RS03570;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=LDO49_RS03570;old_locus_tag=BCEP4_1140117 NZ_CAJZAV010000018.1 Protein Homology CDS 97358 98125 . - 0 ID=cds-WP_021164333.1;Parent=gene-LDO49_RS03570;Dbxref=GenBank:WP_021164333.1;Name=WP_021164333.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734415.1;locus_tag=LDO49_RS03570;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_021164333.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 98122 98943 . - . ID=gene-LDO49_RS03575;Name=LDO49_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03575;old_locus_tag=BCEP4_1140118 NZ_CAJZAV010000018.1 Protein Homology CDS 98122 98943 . - 0 ID=cds-WP_006477138.1;Parent=gene-LDO49_RS03575;Dbxref=GenBank:WP_006477138.1;Name=WP_006477138.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333587.1;locus_tag=LDO49_RS03575;product=ABC transporter ATP-binding protein;protein_id=WP_006477138.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq gene 99028 99515 . - . ID=gene-LDO49_RS03580;Name=LDO49_RS03580;end_range=99515,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03580;old_locus_tag=BCEP4_1140119;partial=true NZ_CAJZAV010000018.1 Protein Homology CDS 99028 99515 . - 2 ID=cds-WP_443797898.1;Parent=gene-LDO49_RS03580;Dbxref=GenBank:WP_443797898.1;Name=WP_443797898.1;end_range=99515,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350715.1;locus_tag=LDO49_RS03580;partial=true;product=thiamine phosphate synthase;protein_id=WP_443797898.1;transl_table=11 NZ_CAJZAV010000018.1 RefSeq pseudogene 99526 99715 . - . ID=gene-LDO49_RS37755;Name=LDO49_RS37755;end_range=99715,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37755;partial=true;pseudo=true;start_range=.,99526 NZ_CAJZAV010000018.1 Protein Homology CDS 99526 99715 . - 1 ID=cds-LDO49_RS37755;Parent=gene-LDO49_RS37755;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=99715,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492304.1;locus_tag=LDO49_RS37755;partial=true;product=thiamine phosphate synthase;pseudo=true;start_range=.,99526;transl_table=11 ##sequence-region NZ_CAJZAV010000019.1 1 33424 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000019.1 RefSeq region 1 33424 . + . ID=NZ_CAJZAV010000019.1:1..33424;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_115 NZ_CAJZAV010000019.1 RefSeq pseudogene 1 229 . + . ID=gene-LDO49_RS03585;Name=LDO49_RS03585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS03585;old_locus_tag=BCEP4_1150001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000019.1 Protein Homology CDS 1 229 . + 1 ID=cds-LDO49_RS03585;Parent=gene-LDO49_RS03585;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725666.1;locus_tag=LDO49_RS03585;partial=true;product=glycosyltransferase family 2 protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq pseudogene 226 343 . + . ID=gene-LDO49_RS37760;Name=LDO49_RS37760;end_range=343,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37760;partial=true;pseudo=true NZ_CAJZAV010000019.1 Protein Homology CDS 226 343 . + 0 ID=cds-LDO49_RS37760;Parent=gene-LDO49_RS37760;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=343,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690754.1;locus_tag=LDO49_RS37760;partial=true;product=glycosyltransferase family 9 protein;pseudo=true;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 354 1299 . + . ID=gene-LDO49_RS03590;Name=LDO49_RS03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03590;old_locus_tag=BCEP4_1150003;partial=true;start_range=.,354 NZ_CAJZAV010000019.1 Protein Homology CDS 354 1299 . + 1 ID=cds-WP_443797899.1;Parent=gene-LDO49_RS03590;Dbxref=GenBank:WP_443797899.1;Name=WP_443797899.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217874.1;locus_tag=LDO49_RS03590;partial=true;product=glycosyltransferase family 9 protein;protein_id=WP_443797899.1;start_range=.,354;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 1289 2239 . + . ID=gene-LDO49_RS03595;Name=LDO49_RS03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03595;old_locus_tag=BCEP4_1150004 NZ_CAJZAV010000019.1 Protein Homology CDS 1289 2239 . + 0 ID=cds-WP_224051422.1;Parent=gene-LDO49_RS03595;Dbxref=GenBank:WP_224051422.1;Name=WP_224051422.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553965.1;locus_tag=LDO49_RS03595;product=glycosyltransferase;protein_id=WP_224051422.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 2288 3334 . - . ID=gene-LDO49_RS03600;Name=LDO49_RS03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03600;old_locus_tag=BCEP4_1150005 NZ_CAJZAV010000019.1 Protein Homology CDS 2288 3334 . - 0 ID=cds-WP_224051423.1;Parent=gene-LDO49_RS03600;Dbxref=GenBank:WP_224051423.1;Name=WP_224051423.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336595.1;locus_tag=LDO49_RS03600;product=sigma-54 interaction domain-containing protein;protein_id=WP_224051423.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 3685 5052 . + . ID=gene-LDO49_RS03605;Name=LDO49_RS03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03605;old_locus_tag=BCEP4_1150006 NZ_CAJZAV010000019.1 Protein Homology CDS 3685 5052 . + 0 ID=cds-WP_021161249.1;Parent=gene-LDO49_RS03605;Dbxref=GenBank:WP_021161249.1;Name=WP_021161249.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660547.1;locus_tag=LDO49_RS03605;product=sigma-54-dependent transcriptional regulator;protein_id=WP_021161249.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 5070 5993 . - . ID=gene-LDO49_RS03610;Name=LDO49_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03610;old_locus_tag=BCEP4_1150007 NZ_CAJZAV010000019.1 Protein Homology CDS 5070 5993 . - 0 ID=cds-WP_111998271.1;Parent=gene-LDO49_RS03610;Dbxref=GenBank:WP_111998271.1;Name=WP_111998271.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217877.1;locus_tag=LDO49_RS03610;product=glycosyltransferase family 2 protein;protein_id=WP_111998271.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 5972 6682 . - . ID=gene-LDO49_RS03615;Name=LDO49_RS03615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03615;old_locus_tag=BCEP4_1150008 NZ_CAJZAV010000019.1 Protein Homology CDS 5972 6682 . - 0 ID=cds-WP_224051424.1;Parent=gene-LDO49_RS03615;Dbxref=GenBank:WP_224051424.1;Name=WP_224051424.1;Ontology_term=GO:0019213;gbkey=CDS;go_function=deacetylase activity|0019213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407421.1;locus_tag=LDO49_RS03615;product=PIG-L deacetylase family protein;protein_id=WP_224051424.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 6784 9096 . + . ID=gene-LDO49_RS03620;Name=LDO49_RS03620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03620;old_locus_tag=BCEP4_1150009 NZ_CAJZAV010000019.1 Protein Homology CDS 6784 9096 . + 0 ID=cds-WP_224051425.1;Parent=gene-LDO49_RS03620;Dbxref=GenBank:WP_224051425.1;Name=WP_224051425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879852.1;locus_tag=LDO49_RS03620;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_224051425.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 9116 10162 . - . ID=gene-LDO49_RS03625;Name=LDO49_RS03625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03625;old_locus_tag=BCEP4_1150010 NZ_CAJZAV010000019.1 Protein Homology CDS 9116 10162 . - 0 ID=cds-WP_021161245.1;Parent=gene-LDO49_RS03625;Dbxref=GenBank:WP_021161245.1;Name=WP_021161245.1;Ontology_term=GO:0042732,GO:0048040,GO:0070403;gbkey=CDS;go_function=UDP-glucuronate decarboxylase activity|0048040||IEA,NAD+ binding|0070403||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498363.1;locus_tag=LDO49_RS03625;product=UDP-glucuronic acid decarboxylase family protein;protein_id=WP_021161245.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 10162 11481 . - . ID=gene-LDO49_RS03630;Name=LDO49_RS03630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03630;old_locus_tag=BCEP4_1150011 NZ_CAJZAV010000019.1 Protein Homology CDS 10162 11481 . - 0 ID=cds-WP_224051426.1;Parent=gene-LDO49_RS03630;Dbxref=GenBank:WP_224051426.1;Name=WP_224051426.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498362.1;locus_tag=LDO49_RS03630;product=glycosyltransferase family 4 protein;protein_id=WP_224051426.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 11724 12143 . + . ID=gene-LDO49_RS03635;Name=LDO49_RS03635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03635;old_locus_tag=BCEP4_1150014 NZ_CAJZAV010000019.1 Protein Homology CDS 11724 12143 . + 0 ID=cds-WP_042976175.1;Parent=gene-LDO49_RS03635;Dbxref=GenBank:WP_042976175.1;Name=WP_042976175.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398914.1;locus_tag=LDO49_RS03635;product=BON domain-containing protein;protein_id=WP_042976175.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 12170 13198 . + . ID=gene-LDO49_RS03640;Name=LDO49_RS03640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03640;old_locus_tag=BCEP4_1150013 NZ_CAJZAV010000019.1 Protein Homology CDS 12170 13198 . + 0 ID=cds-WP_021161241.1;Parent=gene-LDO49_RS03640;Dbxref=GenBank:WP_021161241.1;Name=WP_021161241.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407427.1;locus_tag=LDO49_RS03640;product=SDR family oxidoreductase;protein_id=WP_021161241.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 13233 13532 . + . ID=gene-LDO49_RS03645;Name=LDO49_RS03645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03645;old_locus_tag=BCEP4_1150015 NZ_CAJZAV010000019.1 Protein Homology CDS 13233 13532 . + 0 ID=cds-WP_021161240.1;Parent=gene-LDO49_RS03645;Dbxref=GenBank:WP_021161240.1;Name=WP_021161240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010120910.1;locus_tag=LDO49_RS03645;product=DUF2795 domain-containing protein;protein_id=WP_021161240.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 13594 14160 . + . ID=gene-LDO49_RS03650;Name=LDO49_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03650;old_locus_tag=BCEP4_1150016 NZ_CAJZAV010000019.1 Protein Homology CDS 13594 14160 . + 0 ID=cds-WP_021161239.1;Parent=gene-LDO49_RS03650;Dbxref=GenBank:WP_021161239.1;Name=WP_021161239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398917.1;locus_tag=LDO49_RS03650;product=hypothetical protein;protein_id=WP_021161239.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 14289 15146 . + . ID=gene-LDO49_RS03655;Name=LDO49_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03655;old_locus_tag=BCEP4_1150017 NZ_CAJZAV010000019.1 Protein Homology CDS 14289 15146 . + 0 ID=cds-WP_224051427.1;Parent=gene-LDO49_RS03655;Dbxref=GenBank:WP_224051427.1;Name=WP_224051427.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545572.1;locus_tag=LDO49_RS03655;product=SDR family oxidoreductase;protein_id=WP_224051427.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 15183 15788 . + . ID=gene-LDO49_RS03660;Name=LDO49_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03660;old_locus_tag=BCEP4_1150019 NZ_CAJZAV010000019.1 Protein Homology CDS 15183 15788 . + 0 ID=cds-WP_042976183.1;Parent=gene-LDO49_RS03660;Dbxref=GenBank:WP_042976183.1;Name=WP_042976183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660536.1;locus_tag=LDO49_RS03660;product=DUF4142 domain-containing protein;protein_id=WP_042976183.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 15846 16454 . + . ID=gene-LDO49_RS03665;Name=LDO49_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03665;old_locus_tag=BCEP4_1150020 NZ_CAJZAV010000019.1 Protein Homology CDS 15846 16454 . + 0 ID=cds-WP_059485914.1;Parent=gene-LDO49_RS03665;Dbxref=GenBank:WP_059485914.1;Name=WP_059485914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879861.1;locus_tag=LDO49_RS03665;product=DUF892 family protein;protein_id=WP_059485914.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 16544 17842 . - . ID=gene-LDO49_RS03670;Name=LDO49_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03670;old_locus_tag=BCEP4_1150022 NZ_CAJZAV010000019.1 Protein Homology CDS 16544 17842 . - 0 ID=cds-WP_224051428.1;Parent=gene-LDO49_RS03670;Dbxref=GenBank:WP_224051428.1;Name=WP_224051428.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545569.1;locus_tag=LDO49_RS03670;product=Nramp family divalent metal transporter;protein_id=WP_224051428.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 17839 18510 . - . ID=gene-LDO49_RS03675;Name=LDO49_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03675;old_locus_tag=BCEP4_1150023 NZ_CAJZAV010000019.1 Protein Homology CDS 17839 18510 . - 0 ID=cds-WP_224051429.1;Parent=gene-LDO49_RS03675;Dbxref=GenBank:WP_224051429.1;Name=WP_224051429.1;Note=This protein belongs to the uracil DNA glycosylase superfamily%2C members of which act in excision repair of DNA. However%2C it belongs more specifically to UdgX branch%2C whose founding member was found to bind uracil in DNA (where it does not belong)%2C without cleaving it%2C appears to promote DNA repair by a pathway involving RecA%2C rather than base excision.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336609.1;locus_tag=LDO49_RS03675;product=UdgX family uracil-DNA binding protein;protein_id=WP_224051429.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 18976 19458 . - . ID=gene-LDO49_RS03680;Name=LDO49_RS03680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03680;old_locus_tag=BCEP4_1150024 NZ_CAJZAV010000019.1 Protein Homology CDS 18976 19458 . - 0 ID=cds-WP_048028560.1;Parent=gene-LDO49_RS03680;Dbxref=GenBank:WP_048028560.1;Name=WP_048028560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498342.1;locus_tag=LDO49_RS03680;product=PRC-barrel domain-containing protein;protein_id=WP_048028560.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 19547 19978 . - . ID=gene-LDO49_RS03685;Name=LDO49_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03685;old_locus_tag=BCEP4_1150025 NZ_CAJZAV010000019.1 Protein Homology CDS 19547 19978 . - 0 ID=cds-WP_042976181.1;Parent=gene-LDO49_RS03685;Dbxref=GenBank:WP_042976181.1;Name=WP_042976181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523329.1;locus_tag=LDO49_RS03685;product=CBS domain-containing protein;protein_id=WP_042976181.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 20068 20325 . - . ID=gene-LDO49_RS03690;Name=LDO49_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03690;old_locus_tag=BCEP4_1150026 NZ_CAJZAV010000019.1 Protein Homology CDS 20068 20325 . - 0 ID=cds-WP_021161231.1;Parent=gene-LDO49_RS03690;Dbxref=GenBank:WP_021161231.1;Name=WP_021161231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412871.1;locus_tag=LDO49_RS03690;product=hypothetical protein;protein_id=WP_021161231.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 20475 20780 . + . ID=gene-LDO49_RS03695;Name=LDO49_RS03695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03695;old_locus_tag=BCEP4_1150027 NZ_CAJZAV010000019.1 Protein Homology CDS 20475 20780 . + 0 ID=cds-WP_021161230.1;Parent=gene-LDO49_RS03695;Dbxref=GenBank:WP_021161230.1;Name=WP_021161230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349707.1;locus_tag=LDO49_RS03695;product=hypothetical protein;protein_id=WP_021161230.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 20970 21212 . + . ID=gene-LDO49_RS03700;Name=LDO49_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03700;old_locus_tag=BCEP4_1150028 NZ_CAJZAV010000019.1 Protein Homology CDS 20970 21212 . + 0 ID=cds-WP_059813642.1;Parent=gene-LDO49_RS03700;Dbxref=GenBank:WP_059813642.1;Name=WP_059813642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336613.1;locus_tag=LDO49_RS03700;product=hypothetical protein;protein_id=WP_059813642.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 21209 21520 . + . ID=gene-LDO49_RS03705;Name=LDO49_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03705;old_locus_tag=BCEP4_1150029 NZ_CAJZAV010000019.1 Protein Homology CDS 21209 21520 . + 0 ID=cds-WP_021161228.1;Parent=gene-LDO49_RS03705;Dbxref=GenBank:WP_021161228.1;Name=WP_021161228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498337.1;locus_tag=LDO49_RS03705;product=hypothetical protein;protein_id=WP_021161228.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 21546 21860 . + . ID=gene-LDO49_RS03710;Name=LDO49_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03710;old_locus_tag=BCEP4_1150030 NZ_CAJZAV010000019.1 Protein Homology CDS 21546 21860 . + 0 ID=cds-WP_021161227.1;Parent=gene-LDO49_RS03710;Dbxref=GenBank:WP_021161227.1;Name=WP_021161227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753985.1;locus_tag=LDO49_RS03710;product=hypothetical protein;protein_id=WP_021161227.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 22112 23545 . + . ID=gene-LDO49_RS03715;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=LDO49_RS03715;old_locus_tag=BCEP4_1150031 NZ_CAJZAV010000019.1 Protein Homology CDS 22112 23545 . + 0 ID=cds-WP_059492699.1;Parent=gene-LDO49_RS03715;Dbxref=GenBank:WP_059492699.1;Name=WP_059492699.1;Ontology_term=GO:0006352,GO:0016987;gbkey=CDS;gene=rpoN;go_function=sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217887.1;locus_tag=LDO49_RS03715;product=RNA polymerase factor sigma-54;protein_id=WP_059492699.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 23638 23826 . + . ID=gene-LDO49_RS03720;Name=LDO49_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03720;old_locus_tag=BCEP4_1150032 NZ_CAJZAV010000019.1 Protein Homology CDS 23638 23826 . + 0 ID=cds-WP_021161225.1;Parent=gene-LDO49_RS03720;Dbxref=GenBank:WP_021161225.1;Name=WP_021161225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498333.1;locus_tag=LDO49_RS03720;product=DUF3008 family protein;protein_id=WP_021161225.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 23873 24034 . + . ID=gene-LDO49_RS03725;Name=LDO49_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03725;old_locus_tag=BCEP4_1150033 NZ_CAJZAV010000019.1 Protein Homology CDS 23873 24034 . + 0 ID=cds-WP_021161224.1;Parent=gene-LDO49_RS03725;Dbxref=GenBank:WP_021161224.1;Name=WP_021161224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010120894.1;locus_tag=LDO49_RS03725;product=DUF1328 domain-containing protein;protein_id=WP_021161224.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 24031 24417 . + . ID=gene-LDO49_RS03730;Name=LDO49_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03730;old_locus_tag=BCEP4_1150034 NZ_CAJZAV010000019.1 Protein Homology CDS 24031 24417 . + 0 ID=cds-WP_048028564.1;Parent=gene-LDO49_RS03730;Dbxref=GenBank:WP_048028564.1;Name=WP_048028564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217888.1;locus_tag=LDO49_RS03730;product=DUF3022 domain-containing protein;protein_id=WP_048028564.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 24545 26650 . + . ID=gene-LDO49_RS03735;Name=katE;gbkey=Gene;gene=katE;gene_biotype=protein_coding;locus_tag=LDO49_RS03735;old_locus_tag=BCEP4_1150035 NZ_CAJZAV010000019.1 Protein Homology CDS 24545 26650 . + 0 ID=cds-WP_060147848.1;Parent=gene-LDO49_RS03735;Dbxref=GenBank:WP_060147848.1;Name=WP_060147848.1;Ontology_term=GO:0006979,GO:0004096,GO:0020037;gbkey=CDS;gene=katE;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545554.1;locus_tag=LDO49_RS03735;product=catalase HPII;protein_id=WP_060147848.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 26663 27166 . + . ID=gene-LDO49_RS03740;Name=LDO49_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03740;old_locus_tag=BCEP4_1150036 NZ_CAJZAV010000019.1 Protein Homology CDS 26663 27166 . + 0 ID=cds-WP_059485905.1;Parent=gene-LDO49_RS03740;Dbxref=GenBank:WP_059485905.1;Name=WP_059485905.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012404739.1;locus_tag=LDO49_RS03740;product=DUF421 domain-containing protein;protein_id=WP_059485905.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 27204 28274 . + . ID=gene-LDO49_RS03745;Name=ku;gbkey=Gene;gene=ku;gene_biotype=protein_coding;locus_tag=LDO49_RS03745;old_locus_tag=BCEP4_1150037 NZ_CAJZAV010000019.1 Protein Homology CDS 27204 28274 . + 0 ID=cds-WP_059813536.1;Parent=gene-LDO49_RS03745;Dbxref=GenBank:WP_059813536.1;Name=WP_059813536.1;Ontology_term=GO:0006303,GO:0045027;gbkey=CDS;gene=ku;go_function=DNA end binding|0045027||IEA;go_process=double-strand break repair via nonhomologous end joining|0006303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532581.1;locus_tag=LDO49_RS03745;product=non-homologous end joining protein Ku;protein_id=WP_059813536.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq pseudogene 28297 28727 . + . ID=gene-LDO49_RS37465;Name=LDO49_RS37465;end_range=28727,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37465;partial=true;pseudo=true NZ_CAJZAV010000019.1 Protein Homology CDS 28297 28727 . + 0 ID=cds-LDO49_RS37465;Parent=gene-LDO49_RS37465;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=28727,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011695006.1;locus_tag=LDO49_RS37465;partial=true;product=DNA polymerase ligase N-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 28738 31153 . + . ID=gene-LDO49_RS03750;Name=ligD;gbkey=Gene;gene=ligD;gene_biotype=protein_coding;locus_tag=LDO49_RS03750;old_locus_tag=BCEP4_1150039;partial=true;start_range=.,28738 NZ_CAJZAV010000019.1 Protein Homology CDS 28738 31153 . + 1 ID=cds-WP_443797900.1;Parent=gene-LDO49_RS03750;Dbxref=GenBank:WP_443797900.1;Name=WP_443797900.1;Ontology_term=GO:0006303;gbkey=CDS;gene=ligD;go_process=double-strand break repair via nonhomologous end joining|0006303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735147.1;locus_tag=LDO49_RS03750;partial=true;product=DNA ligase D;protein_id=WP_443797900.1;start_range=.,28738;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 31159 32478 . - . ID=gene-LDO49_RS03755;Name=LDO49_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03755;old_locus_tag=BCEP4_1150040 NZ_CAJZAV010000019.1 Protein Homology CDS 31159 32478 . - 0 ID=cds-WP_021161218.1;Parent=gene-LDO49_RS03755;Dbxref=GenBank:WP_021161218.1;Name=WP_021161218.1;Ontology_term=GO:0006812,GO:0055085,GO:1902600,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529423.1;locus_tag=LDO49_RS03755;product=cation:proton antiporter domain-containing protein;protein_id=WP_021161218.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 32521 32877 . - . ID=gene-LDO49_RS03760;Name=LDO49_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03760;old_locus_tag=BCEP4_1150041 NZ_CAJZAV010000019.1 Protein Homology CDS 32521 32877 . - 0 ID=cds-WP_060147854.1;Parent=gene-LDO49_RS03760;Dbxref=GenBank:WP_060147854.1;Name=WP_060147854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754300.1;locus_tag=LDO49_RS03760;product=DUF3175 domain-containing protein;protein_id=WP_060147854.1;transl_table=11 NZ_CAJZAV010000019.1 RefSeq gene 33051 33424 . + . ID=gene-LDO49_RS03765;Name=LDO49_RS03765;end_range=33424,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03765;partial=true NZ_CAJZAV010000019.1 Protein Homology CDS 33051 33424 . + 0 ID=cds-WP_224051430.1;Parent=gene-LDO49_RS03765;Dbxref=GenBank:WP_224051430.1;Name=WP_224051430.1;end_range=33424,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761774.1;locus_tag=LDO49_RS03765;partial=true;product=hypothetical protein;protein_id=WP_224051430.1;transl_table=11 ##sequence-region NZ_CAJZAV010000020.1 1 17922 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000020.1 RefSeq region 1 17922 . + . ID=NZ_CAJZAV010000020.1:1..17922;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_116 NZ_CAJZAV010000020.1 RefSeq gene 757 1101 . + . ID=gene-LDO49_RS03770;Name=LDO49_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03770;old_locus_tag=BCEP4_1160003 NZ_CAJZAV010000020.1 Protein Homology CDS 757 1101 . + 0 ID=cds-WP_021164050.1;Parent=gene-LDO49_RS03770;Dbxref=GenBank:WP_021164050.1;Name=WP_021164050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882083.1;locus_tag=LDO49_RS03770;product=DUF3564 family protein;protein_id=WP_021164050.1;transl_table=11 NZ_CAJZAV010000020.1 RefSeq gene 1519 3414 . + . ID=gene-LDO49_RS03775;Name=LDO49_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03775;old_locus_tag=BCEP4_1160005 NZ_CAJZAV010000020.1 Protein Homology CDS 1519 3414 . + 0 ID=cds-WP_060071683.1;Parent=gene-LDO49_RS03775;Dbxref=GenBank:WP_060071683.1;Name=WP_060071683.1;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658667.1;locus_tag=LDO49_RS03775;product=peptidoglycan D%2CD-transpeptidase FtsI family protein;protein_id=WP_060071683.1;transl_table=11 NZ_CAJZAV010000020.1 RefSeq gene 3625 4620 . + . ID=gene-LDO49_RS03780;Name=LDO49_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03780;old_locus_tag=BCEP4_1160006 NZ_CAJZAV010000020.1 Protein Homology CDS 3625 4620 . + 0 ID=cds-WP_059492330.1;Parent=gene-LDO49_RS03780;Dbxref=GenBank:WP_059492330.1;Name=WP_059492330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494976.1;locus_tag=LDO49_RS03780;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_059492330.1;transl_table=11 NZ_CAJZAV010000020.1 RefSeq gene 4640 5404 . + . ID=gene-LDO49_RS03785;Name=LDO49_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03785;old_locus_tag=BCEP4_1160007 NZ_CAJZAV010000020.1 Protein Homology CDS 4640 5404 . + 0 ID=cds-WP_059485031.1;Parent=gene-LDO49_RS03785;Dbxref=GenBank:WP_059485031.1;Name=WP_059485031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483553.1;locus_tag=LDO49_RS03785;product=SDR family oxidoreductase;protein_id=WP_059485031.1;transl_table=11 NZ_CAJZAV010000020.1 RefSeq gene 5466 7181 . - . ID=gene-LDO49_RS03790;Name=LDO49_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03790;old_locus_tag=BCEP4_1160008 NZ_CAJZAV010000020.1 Protein Homology CDS 5466 7181 . - 0 ID=cds-WP_021164046.1;Parent=gene-LDO49_RS03790;Dbxref=GenBank:WP_021164046.1;Name=WP_021164046.1;Ontology_term=GO:0006812,GO:0055085,GO:1902600,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365925.1;locus_tag=LDO49_RS03790;product=cation:proton antiporter domain-containing protein;protein_id=WP_021164046.1;transl_table=11 NZ_CAJZAV010000020.1 RefSeq gene 7390 8802 . - . ID=gene-LDO49_RS03795;Name=LDO49_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03795;old_locus_tag=BCEP4_1160009 NZ_CAJZAV010000020.1 Protein Homology CDS 7390 8802 . - 0 ID=cds-WP_048021877.1;Parent=gene-LDO49_RS03795;Dbxref=GenBank:WP_048021877.1;Name=WP_048021877.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547847.1;locus_tag=LDO49_RS03795;product=c-type cytochrome;protein_id=WP_048021877.1;transl_table=11 NZ_CAJZAV010000020.1 RefSeq gene 8799 10577 . - . ID=gene-LDO49_RS03800;Name=LDO49_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03800;old_locus_tag=BCEP4_1160010 NZ_CAJZAV010000020.1 Protein Homology CDS 8799 10577 . - 0 ID=cds-WP_021163240.1;Parent=gene-LDO49_RS03800;Dbxref=GenBank:WP_021163240.1;Name=WP_021163240.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402392.1;locus_tag=LDO49_RS03800;product=GMC family oxidoreductase;protein_id=WP_021163240.1;transl_table=11 NZ_CAJZAV010000020.1 RefSeq gene 10577 11314 . - . ID=gene-LDO49_RS03805;Name=LDO49_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03805;old_locus_tag=BCEP4_1160011 NZ_CAJZAV010000020.1 Protein Homology CDS 10577 11314 . - 0 ID=cds-WP_059591461.1;Parent=gene-LDO49_RS03805;Dbxref=GenBank:WP_059591461.1;Name=WP_059591461.1;Ontology_term=GO:0008873,GO:0008875;gbkey=CDS;go_function=gluconate 2-dehydrogenase activity|0008873||IEA,gluconate dehydrogenase activity|0008875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415138.1;locus_tag=LDO49_RS03805;product=gluconate 2-dehydrogenase subunit 3 family protein;protein_id=WP_059591461.1;transl_table=11 NZ_CAJZAV010000020.1 RefSeq gene 11919 12503 . + . ID=gene-LDO49_RS03810;Name=LDO49_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03810;old_locus_tag=BCEP4_1160013 NZ_CAJZAV010000020.1 Protein Homology CDS 11919 12503 . + 0 ID=cds-WP_059485034.1;Parent=gene-LDO49_RS03810;Dbxref=GenBank:WP_059485034.1;Name=WP_059485034.1;Ontology_term=GO:0003950;gbkey=CDS;go_function=NAD+ poly-ADP-ribosyltransferase activity|0003950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355397.1;locus_tag=LDO49_RS03810;product=RNA 2'-phosphotransferase;protein_id=WP_059485034.1;transl_table=11 NZ_CAJZAV010000020.1 RefSeq gene 12513 12929 . - . ID=gene-LDO49_RS03815;Name=LDO49_RS03815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03815;old_locus_tag=BCEP4_1160014 NZ_CAJZAV010000020.1 Protein Homology CDS 12513 12929 . - 0 ID=cds-WP_042977744.1;Parent=gene-LDO49_RS03815;Dbxref=GenBank:WP_042977744.1;Name=WP_042977744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882077.1;locus_tag=LDO49_RS03815;product=DUF3995 domain-containing protein;protein_id=WP_042977744.1;transl_table=11 NZ_CAJZAV010000020.1 RefSeq gene 13231 14346 . + . ID=gene-LDO49_RS03820;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=LDO49_RS03820;old_locus_tag=BCEP4_1160015 NZ_CAJZAV010000020.1 Protein Homology CDS 13231 14346 . + 0 ID=cds-WP_027791421.1;Parent=gene-LDO49_RS03820;Dbxref=GenBank:WP_027791421.1;Name=WP_027791421.1;Ontology_term=GO:0042853,GO:0000286;gbkey=CDS;gene=ald;go_function=alanine dehydrogenase activity|0000286||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365921.1;locus_tag=LDO49_RS03820;product=alanine dehydrogenase;protein_id=WP_027791421.1;transl_table=11 NZ_CAJZAV010000020.1 RefSeq gene 14392 16158 . - . ID=gene-LDO49_RS03825;Name=polX;gbkey=Gene;gene=polX;gene_biotype=protein_coding;locus_tag=LDO49_RS03825;old_locus_tag=BCEP4_1160016 NZ_CAJZAV010000020.1 Protein Homology CDS 14392 16158 . - 0 ID=cds-WP_060071680.1;Parent=gene-LDO49_RS03825;Dbxref=GenBank:WP_060071680.1;Name=WP_060071680.1;Ontology_term=GO:0006281,GO:0003677,GO:0003887;gbkey=CDS;gene=polX;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753535.1;locus_tag=LDO49_RS03825;product=DNA polymerase/3'-5' exonuclease PolX;protein_id=WP_060071680.1;transl_table=11 NZ_CAJZAV010000020.1 RefSeq gene 16307 16699 . - . ID=gene-LDO49_RS03830;Name=LDO49_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03830;old_locus_tag=BCEP4_1160017 NZ_CAJZAV010000020.1 Protein Homology CDS 16307 16699 . - 0 ID=cds-WP_021160664.1;Parent=gene-LDO49_RS03830;Dbxref=GenBank:WP_021160664.1;Name=WP_021160664.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759722.1;locus_tag=LDO49_RS03830;product=TraR/DksA family transcriptional regulator;protein_id=WP_021160664.1;transl_table=11 NZ_CAJZAV010000020.1 RefSeq gene 17079 17922 . - . ID=gene-LDO49_RS03835;Name=LDO49_RS03835;end_range=17922,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03835;old_locus_tag=BCEP4_1160018;partial=true NZ_CAJZAV010000020.1 Protein Homology CDS 17079 17922 . - 1 ID=cds-WP_224051431.1;Parent=gene-LDO49_RS03835;Dbxref=GenBank:WP_224051431.1;Name=WP_224051431.1;Ontology_term=GO:0016780;end_range=17922,.;gbkey=CDS;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402401.1;locus_tag=LDO49_RS03835;partial=true;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_224051431.1;transl_table=11 ##sequence-region NZ_CAJZAV010000021.1 1 32468 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000021.1 RefSeq region 1 32468 . + . ID=NZ_CAJZAV010000021.1:1..32468;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_117 NZ_CAJZAV010000021.1 RefSeq gene 1 687 . - . ID=gene-LDO49_RS03840;Name=LDO49_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03840;partial=true;start_range=.,1 NZ_CAJZAV010000021.1 Protein Homology CDS 1 687 . - 0 ID=cds-WP_224051432.1;Parent=gene-LDO49_RS03840;Dbxref=GenBank:WP_224051432.1;Name=WP_224051432.1;Ontology_term=GO:0005515,GO:0070064;gbkey=CDS;go_function=protein binding|0005515||IEA,proline-rich region binding|0070064||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547930.1;locus_tag=LDO49_RS03840;partial=true;product=SH3 domain-containing protein;protein_id=WP_224051432.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 721 1161 . - . ID=gene-LDO49_RS03845;Name=LDO49_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03845;old_locus_tag=BCEP4_1170002 NZ_CAJZAV010000021.1 Protein Homology CDS 721 1161 . - 0 ID=cds-WP_021162069.1;Parent=gene-LDO49_RS03845;Dbxref=GenBank:WP_021162069.1;Name=WP_021162069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547931.1;locus_tag=LDO49_RS03845;product=hypothetical protein;protein_id=WP_021162069.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 1460 3001 . + . ID=gene-LDO49_RS03850;Name=LDO49_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03850;old_locus_tag=BCEP4_1170003 NZ_CAJZAV010000021.1 Protein Homology CDS 1460 3001 . + 0 ID=cds-WP_224051433.1;Parent=gene-LDO49_RS03850;Dbxref=GenBank:WP_224051433.1;Name=WP_224051433.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484701.1;locus_tag=LDO49_RS03850;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_224051433.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 3182 4063 . + . ID=gene-LDO49_RS03855;Name=LDO49_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03855;old_locus_tag=BCEP4_1170004 NZ_CAJZAV010000021.1 Protein Homology CDS 3182 4063 . + 0 ID=cds-WP_021162072.1;Parent=gene-LDO49_RS03855;Dbxref=GenBank:WP_021162072.1;Name=WP_021162072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338342.1;locus_tag=LDO49_RS03855;product=helix-hairpin-helix domain-containing protein;protein_id=WP_021162072.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 4069 4896 . - . ID=gene-LDO49_RS03860;Name=LDO49_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03860;old_locus_tag=BCEP4_1170005 NZ_CAJZAV010000021.1 GeneMarkS-2+ CDS 4069 4896 . - 0 ID=cds-WP_224051434.1;Parent=gene-LDO49_RS03860;Dbxref=GenBank:WP_224051434.1;Name=WP_224051434.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS03860;product=hypothetical protein;protein_id=WP_224051434.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 5000 5425 . - . ID=gene-LDO49_RS03865;Name=LDO49_RS03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03865;old_locus_tag=BCEP4_1170006 NZ_CAJZAV010000021.1 Protein Homology CDS 5000 5425 . - 0 ID=cds-WP_224051435.1;Parent=gene-LDO49_RS03865;Dbxref=GenBank:WP_224051435.1;Name=WP_224051435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752798.1;locus_tag=LDO49_RS03865;product=helix-turn-helix domain-containing protein;protein_id=WP_224051435.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 5566 6063 . + . ID=gene-LDO49_RS03870;Name=LDO49_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03870;old_locus_tag=BCEP4_1170007 NZ_CAJZAV010000021.1 Protein Homology CDS 5566 6063 . + 0 ID=cds-WP_021162075.1;Parent=gene-LDO49_RS03870;Dbxref=GenBank:WP_021162075.1;Name=WP_021162075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495066.1;locus_tag=LDO49_RS03870;product=DUF2938 domain-containing protein;protein_id=WP_021162075.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 6334 6774 . - . ID=gene-LDO49_RS03875;Name=LDO49_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03875;old_locus_tag=BCEP4_1170008 NZ_CAJZAV010000021.1 Protein Homology CDS 6334 6774 . - 0 ID=cds-WP_021162076.1;Parent=gene-LDO49_RS03875;Dbxref=GenBank:WP_021162076.1;Name=WP_021162076.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547936.1;locus_tag=LDO49_RS03875;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_021162076.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 6910 8439 . + . ID=gene-LDO49_RS03880;Name=LDO49_RS03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03880;old_locus_tag=BCEP4_1170009 NZ_CAJZAV010000021.1 Protein Homology CDS 6910 8439 . + 0 ID=cds-WP_021162077.1;Parent=gene-LDO49_RS03880;Dbxref=GenBank:WP_021162077.1;Name=WP_021162077.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399840.1;locus_tag=LDO49_RS03880;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_021162077.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 8477 9991 . - . ID=gene-LDO49_RS03885;Name=LDO49_RS03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03885;old_locus_tag=BCEP4_1170010 NZ_CAJZAV010000021.1 Protein Homology CDS 8477 9991 . - 0 ID=cds-WP_027791325.1;Parent=gene-LDO49_RS03885;Dbxref=GenBank:WP_027791325.1;Name=WP_027791325.1;Ontology_term=GO:0006083,GO:0006084,GO:0008775;gbkey=CDS;go_function=acetate CoA-transferase activity|0008775||IEA;go_process=acetate metabolic process|0006083||IEA,acetyl-CoA metabolic process|0006084||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365838.1;locus_tag=LDO49_RS03885;product=acetyl-CoA hydrolase/transferase family protein;protein_id=WP_027791325.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 10224 10382 . + . ID=gene-LDO49_RS03890;Name=LDO49_RS03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03890 NZ_CAJZAV010000021.1 GeneMarkS-2+ CDS 10224 10382 . + 0 ID=cds-WP_224051437.1;Parent=gene-LDO49_RS03890;Dbxref=GenBank:WP_224051437.1;Name=WP_224051437.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS03890;product=hypothetical protein;protein_id=WP_224051437.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 10647 11327 . + . ID=gene-LDO49_RS03895;Name=LDO49_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03895;old_locus_tag=BCEP4_1170011 NZ_CAJZAV010000021.1 Protein Homology CDS 10647 11327 . + 0 ID=cds-WP_021162080.1;Parent=gene-LDO49_RS03895;Dbxref=GenBank:WP_021162080.1;Name=WP_021162080.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658562.1;locus_tag=LDO49_RS03895;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_021162080.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 11324 12133 . + . ID=gene-LDO49_RS03900;Name=LDO49_RS03900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03900;old_locus_tag=BCEP4_1170012 NZ_CAJZAV010000021.1 Protein Homology CDS 11324 12133 . + 0 ID=cds-WP_059485097.1;Parent=gene-LDO49_RS03900;Dbxref=GenBank:WP_059485097.1;Name=WP_059485097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694707.1;locus_tag=LDO49_RS03900;product=HalD/BesD family halogenase;protein_id=WP_059485097.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 12130 13131 . + . ID=gene-LDO49_RS03905;Name=LDO49_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03905;old_locus_tag=BCEP4_1170013 NZ_CAJZAV010000021.1 Protein Homology CDS 12130 13131 . + 0 ID=cds-WP_021162082.1;Parent=gene-LDO49_RS03905;Dbxref=GenBank:WP_021162082.1;Name=WP_021162082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399831.1;locus_tag=LDO49_RS03905;product=HpnL family protein;protein_id=WP_021162082.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 13168 13935 . + . ID=gene-LDO49_RS03910;Name=LDO49_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03910;old_locus_tag=BCEP4_1170014 NZ_CAJZAV010000021.1 Protein Homology CDS 13168 13935 . + 0 ID=cds-WP_021162083.1;Parent=gene-LDO49_RS03910;Dbxref=GenBank:WP_021162083.1;Name=WP_021162083.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603691.1;locus_tag=LDO49_RS03910;product=phosphocholine cytidylyltransferase family protein;protein_id=WP_021162083.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 13932 15617 . + . ID=gene-LDO49_RS03915;Name=aepX;gbkey=Gene;gene=aepX;gene_biotype=protein_coding;locus_tag=LDO49_RS03915;old_locus_tag=BCEP4_1170015 NZ_CAJZAV010000021.1 Protein Homology CDS 13932 15617 . + 0 ID=cds-WP_021162084.1;Parent=gene-LDO49_RS03915;Dbxref=GenBank:WP_021162084.1;Name=WP_021162084.1;Ontology_term=GO:0019634,GO:0050188;gbkey=CDS;gene=aepX;go_function=phosphoenolpyruvate mutase activity|0050188||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004542643.1;locus_tag=LDO49_RS03915;product=phosphoenolpyruvate mutase;protein_id=WP_021162084.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 15614 16795 . + . ID=gene-LDO49_RS03920;Name=aepY;gbkey=Gene;gene=aepY;gene_biotype=protein_coding;locus_tag=LDO49_RS03920;old_locus_tag=BCEP4_1170016 NZ_CAJZAV010000021.1 Protein Homology CDS 15614 16795 . + 0 ID=cds-WP_224051438.1;Parent=gene-LDO49_RS03920;Dbxref=GenBank:WP_224051438.1;Name=WP_224051438.1;Ontology_term=GO:0032923,GO:0033980;gbkey=CDS;gene=aepY;go_function=phosphonopyruvate decarboxylase activity|0033980||IEA;go_process=organic phosphonate biosynthetic process|0032923||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484696.1;locus_tag=LDO49_RS03920;product=phosphonopyruvate decarboxylase;protein_id=WP_224051438.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 16795 17859 . + . ID=gene-LDO49_RS03925;Name=LDO49_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03925;old_locus_tag=BCEP4_1170017 NZ_CAJZAV010000021.1 Protein Homology CDS 16795 17859 . + 0 ID=cds-WP_224051439.1;Parent=gene-LDO49_RS03925;Dbxref=GenBank:WP_224051439.1;Name=WP_224051439.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187270.1;locus_tag=LDO49_RS03925;product=2-aminoethylphosphonate aminotransferase;protein_id=WP_224051439.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 18086 19039 . + . ID=gene-LDO49_RS03930;Name=LDO49_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03930;old_locus_tag=BCEP4_1170018 NZ_CAJZAV010000021.1 Protein Homology CDS 18086 19039 . + 0 ID=cds-WP_059485101.1;Parent=gene-LDO49_RS03930;Dbxref=GenBank:WP_059485101.1;Name=WP_059485101.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405482.1;locus_tag=LDO49_RS03930;product=LysR family transcriptional regulator;protein_id=WP_059485101.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 19103 20512 . + . ID=gene-LDO49_RS03935;Name=tcuA;gbkey=Gene;gene=tcuA;gene_biotype=protein_coding;locus_tag=LDO49_RS03935;old_locus_tag=BCEP4_1170019 NZ_CAJZAV010000021.1 Protein Homology CDS 19103 20512 . + 0 ID=cds-WP_224051440.1;Parent=gene-LDO49_RS03935;Dbxref=GenBank:WP_224051440.1;Name=WP_224051440.1;gbkey=CDS;gene=tcuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012427481.1;locus_tag=LDO49_RS03935;product=FAD-dependent tricarballylate dehydrogenase TcuA;protein_id=WP_224051440.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 20499 21713 . + . ID=gene-LDO49_RS03940;Name=tcuB;gbkey=Gene;gene=tcuB;gene_biotype=protein_coding;locus_tag=LDO49_RS03940;old_locus_tag=BCEP4_1170020 NZ_CAJZAV010000021.1 Protein Homology CDS 20499 21713 . + 0 ID=cds-WP_124465960.1;Parent=gene-LDO49_RS03940;Dbxref=GenBank:WP_124465960.1;Name=WP_124465960.1;gbkey=CDS;gene=tcuB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012464830.1;locus_tag=LDO49_RS03940;product=tricarballylate utilization 4Fe-4S protein TcuB;protein_id=WP_124465960.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 21772 23094 . + . ID=gene-LDO49_RS03945;Name=LDO49_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03945;old_locus_tag=BCEP4_1170021 NZ_CAJZAV010000021.1 Protein Homology CDS 21772 23094 . + 0 ID=cds-WP_224051445.1;Parent=gene-LDO49_RS03945;Dbxref=GenBank:WP_224051445.1;Name=WP_224051445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372226.1;locus_tag=LDO49_RS03945;product=MFS transporter;protein_id=WP_224051445.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 23621 24568 . - . ID=gene-LDO49_RS03950;Name=LDO49_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03950;old_locus_tag=BCEP4_1170023 NZ_CAJZAV010000021.1 GeneMarkS-2+ CDS 23621 24568 . - 0 ID=cds-WP_224051441.1;Parent=gene-LDO49_RS03950;Dbxref=GenBank:WP_224051441.1;Name=WP_224051441.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS03950;product=hypothetical protein;protein_id=WP_224051441.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 25111 25899 . + . ID=gene-LDO49_RS03955;Name=LDO49_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03955;old_locus_tag=BCEP4_1170026 NZ_CAJZAV010000021.1 Protein Homology CDS 25111 25899 . + 0 ID=cds-WP_224051446.1;Parent=gene-LDO49_RS03955;Dbxref=GenBank:WP_224051446.1;Name=WP_224051446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484684.1;locus_tag=LDO49_RS03955;product=multidrug ABC transporter ATPase;protein_id=WP_224051446.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq pseudogene 25909 26016 . - . ID=gene-LDO49_RS03960;Name=LDO49_RS03960;end_range=26016,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS03960;partial=true;pseudo=true NZ_CAJZAV010000021.1 Protein Homology CDS 25909 26016 . - 0 ID=cds-LDO49_RS03960;Parent=gene-LDO49_RS03960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=26016,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899655.1;locus_tag=LDO49_RS03960;partial=true;product=carboxymuconolactone decarboxylase family protein;pseudo=true;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 26128 27282 . - . ID=gene-LDO49_RS03965;Name=LDO49_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03965;old_locus_tag=BCEP4_1170027 NZ_CAJZAV010000021.1 Protein Homology CDS 26128 27282 . - 0 ID=cds-WP_059591406.1;Parent=gene-LDO49_RS03965;Dbxref=GenBank:WP_059591406.1;Name=WP_059591406.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760246.1;locus_tag=LDO49_RS03965;product=acyltransferase family protein;protein_id=WP_059591406.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 27274 27471 . + . ID=gene-LDO49_RS03970;Name=LDO49_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03970 NZ_CAJZAV010000021.1 GeneMarkS-2+ CDS 27274 27471 . + 0 ID=cds-WP_141667409.1;Parent=gene-LDO49_RS03970;Dbxref=GenBank:WP_141667409.1;Name=WP_141667409.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS03970;product=hypothetical protein;protein_id=WP_141667409.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 27614 28546 . + . ID=gene-LDO49_RS03975;Name=pip;gbkey=Gene;gene=pip;gene_biotype=protein_coding;locus_tag=LDO49_RS03975;old_locus_tag=BCEP4_1170028 NZ_CAJZAV010000021.1 Protein Homology CDS 27614 28546 . + 0 ID=cds-WP_224051442.1;Parent=gene-LDO49_RS03975;Dbxref=GenBank:WP_224051442.1;Name=WP_224051442.1;Ontology_term=GO:0030163,GO:0004177,GO:0005737;gbkey=CDS;gene=pip;go_component=cytoplasm|0005737||IEA;go_function=aminopeptidase activity|0004177||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899657.1;locus_tag=LDO49_RS03975;product=prolyl aminopeptidase;protein_id=WP_224051442.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 28621 28893 . - . ID=gene-LDO49_RS03980;Name=LDO49_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03980;old_locus_tag=BCEP4_1170030 NZ_CAJZAV010000021.1 Protein Homology CDS 28621 28893 . - 0 ID=cds-WP_027791308.1;Parent=gene-LDO49_RS03980;Dbxref=GenBank:WP_027791308.1;Name=WP_027791308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365826.1;locus_tag=LDO49_RS03980;product=hypothetical protein;protein_id=WP_027791308.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 29078 30127 . - . ID=gene-LDO49_RS03985;Name=LDO49_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03985;old_locus_tag=BCEP4_1170031 NZ_CAJZAV010000021.1 Protein Homology CDS 29078 30127 . - 0 ID=cds-WP_069254408.1;Parent=gene-LDO49_RS03985;Dbxref=GenBank:WP_069254408.1;Name=WP_069254408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355529.1;locus_tag=LDO49_RS03985;product=transglutaminase family protein;protein_id=WP_069254408.1;transl_table=11 NZ_CAJZAV010000021.1 RefSeq gene 30121 32468 . - . ID=gene-LDO49_RS03990;Name=LDO49_RS03990;end_range=32468,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03990;old_locus_tag=BCEP4_1170032;partial=true NZ_CAJZAV010000021.1 Protein Homology CDS 30121 32468 . - 2 ID=cds-WP_224051443.1;Parent=gene-LDO49_RS03990;Dbxref=GenBank:WP_224051443.1;Name=WP_224051443.1;end_range=32468,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200656.1;locus_tag=LDO49_RS03990;partial=true;product=circularly permuted type 2 ATP-grasp protein;protein_id=WP_224051443.1;transl_table=11 ##sequence-region NZ_CAJZAV010000022.1 1 49074 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000022.1 RefSeq region 1 49074 . + . ID=NZ_CAJZAV010000022.1:1..49074;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_118 NZ_CAJZAV010000022.1 RefSeq gene 491 1729 . + . ID=gene-LDO49_RS03995;Name=LDO49_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS03995;old_locus_tag=BCEP4_1180001 NZ_CAJZAV010000022.1 Protein Homology CDS 491 1729 . + 0 ID=cds-WP_021162356.1;Parent=gene-LDO49_RS03995;Dbxref=GenBank:WP_021162356.1;Name=WP_021162356.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491594.1;locus_tag=LDO49_RS03995;product=MFS transporter;protein_id=WP_021162356.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 1799 2596 . - . ID=gene-LDO49_RS04000;Name=LDO49_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04000;old_locus_tag=BCEP4_1180002 NZ_CAJZAV010000022.1 Protein Homology CDS 1799 2596 . - 0 ID=cds-WP_059555295.1;Parent=gene-LDO49_RS04000;Dbxref=GenBank:WP_059555295.1;Name=WP_059555295.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012433780.1;locus_tag=LDO49_RS04000;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_059555295.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 2593 4956 . - . ID=gene-LDO49_RS04005;Name=LDO49_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04005;old_locus_tag=BCEP4_1180003 NZ_CAJZAV010000022.1 Protein Homology CDS 2593 4956 . - 0 ID=cds-WP_059497793.1;Parent=gene-LDO49_RS04005;Dbxref=GenBank:WP_059497793.1;Name=WP_059497793.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404978.1;locus_tag=LDO49_RS04005;product=UvrD-helicase domain-containing protein;protein_id=WP_059497793.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 5181 8048 . + . ID=gene-LDO49_RS04010;Name=LDO49_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04010;old_locus_tag=BCEP4_1180004 NZ_CAJZAV010000022.1 Protein Homology CDS 5181 8048 . + 0 ID=cds-WP_124475927.1;Parent=gene-LDO49_RS04010;Dbxref=GenBank:WP_124475927.1;Name=WP_124475927.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026481.1;locus_tag=LDO49_RS04010;product=valine--tRNA ligase;protein_id=WP_124475927.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 8136 9020 . + . ID=gene-LDO49_RS04015;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=LDO49_RS04015;old_locus_tag=BCEP4_1180005 NZ_CAJZAV010000022.1 Protein Homology CDS 8136 9020 . + 0 ID=cds-WP_021162362.1;Parent=gene-LDO49_RS04015;Dbxref=GenBank:WP_021162362.1;Name=WP_021162362.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351748.1;locus_tag=LDO49_RS04015;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_021162362.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 9080 9694 . - . ID=gene-LDO49_RS04020;Name=LDO49_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04020;old_locus_tag=BCEP4_1180006 NZ_CAJZAV010000022.1 Protein Homology CDS 9080 9694 . - 0 ID=cds-WP_124475928.1;Parent=gene-LDO49_RS04020;Dbxref=GenBank:WP_124475928.1;Name=WP_124475928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490440.1;locus_tag=LDO49_RS04020;product=DUF4136 domain-containing protein;protein_id=WP_124475928.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 9732 12119 . - . ID=gene-LDO49_RS04025;Name=LDO49_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04025;old_locus_tag=BCEP4_1180007 NZ_CAJZAV010000022.1 Protein Homology CDS 9732 12119 . - 0 ID=cds-WP_060074024.1;Parent=gene-LDO49_RS04025;Dbxref=GenBank:WP_060074024.1;Name=WP_060074024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328350.1;locus_tag=LDO49_RS04025;product=CHASE2 domain-containing protein;protein_id=WP_060074024.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 12130 13491 . - . ID=gene-LDO49_RS04030;Name=LDO49_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04030;old_locus_tag=BCEP4_1180008 NZ_CAJZAV010000022.1 Protein Homology CDS 12130 13491 . - 0 ID=cds-WP_060074022.1;Parent=gene-LDO49_RS04030;Dbxref=GenBank:WP_060074022.1;Name=WP_060074022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351745.1;locus_tag=LDO49_RS04030;product=FecR family protein;protein_id=WP_060074022.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 13488 14192 . - . ID=gene-LDO49_RS04035;Name=LDO49_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04035;old_locus_tag=BCEP4_1180009 NZ_CAJZAV010000022.1 Protein Homology CDS 13488 14192 . - 0 ID=cds-WP_006490421.1;Parent=gene-LDO49_RS04035;Dbxref=GenBank:WP_006490421.1;Name=WP_006490421.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193573.1;locus_tag=LDO49_RS04035;product=response regulator transcription factor;protein_id=WP_006490421.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 14462 14884 . - . ID=gene-LDO49_RS04040;Name=LDO49_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04040;old_locus_tag=BCEP4_1180010 NZ_CAJZAV010000022.1 Protein Homology CDS 14462 14884 . - 0 ID=cds-WP_060074020.1;Parent=gene-LDO49_RS04040;Dbxref=GenBank:WP_060074020.1;Name=WP_060074020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545215.1;locus_tag=LDO49_RS04040;product=hypothetical protein;protein_id=WP_060074020.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 15084 15311 . - . ID=gene-LDO49_RS04045;Name=LDO49_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04045;old_locus_tag=BCEP4_1180011 NZ_CAJZAV010000022.1 Protein Homology CDS 15084 15311 . - 0 ID=cds-WP_006402122.1;Parent=gene-LDO49_RS04045;Dbxref=GenBank:WP_006402122.1;Name=WP_006402122.1;Ontology_term=GO:0097163;gbkey=CDS;go_function=sulfur carrier activity|0097163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026473.1;locus_tag=LDO49_RS04045;product=sulfurtransferase TusA family protein;protein_id=WP_006402122.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 15429 16364 . - . ID=gene-LDO49_RS04050;Name=LDO49_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04050;old_locus_tag=BCEP4_1180012 NZ_CAJZAV010000022.1 Protein Homology CDS 15429 16364 . - 0 ID=cds-WP_059652440.1;Parent=gene-LDO49_RS04050;Dbxref=GenBank:WP_059652440.1;Name=WP_059652440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545214.1;locus_tag=LDO49_RS04050;product=LysR family transcriptional regulator;protein_id=WP_059652440.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 16478 17998 . + . ID=gene-LDO49_RS04055;Name=LDO49_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04055;old_locus_tag=BCEP4_1180013 NZ_CAJZAV010000022.1 Protein Homology CDS 16478 17998 . + 0 ID=cds-WP_027787736.1;Parent=gene-LDO49_RS04055;Dbxref=GenBank:WP_027787736.1;Name=WP_027787736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764544.1;locus_tag=LDO49_RS04055;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_027787736.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 18058 18942 . - . ID=gene-LDO49_RS04060;Name=LDO49_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04060;old_locus_tag=BCEP4_1180014 NZ_CAJZAV010000022.1 Protein Homology CDS 18058 18942 . - 0 ID=cds-WP_021162369.1;Parent=gene-LDO49_RS04060;Dbxref=GenBank:WP_021162369.1;Name=WP_021162369.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497758.1;locus_tag=LDO49_RS04060;product=MurR/RpiR family transcriptional regulator;protein_id=WP_021162369.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 19273 20445 . - . ID=gene-LDO49_RS04065;Name=LDO49_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04065;old_locus_tag=BCEP4_1180015 NZ_CAJZAV010000022.1 Protein Homology CDS 19273 20445 . - 0 ID=cds-WP_021162370.1;Parent=gene-LDO49_RS04065;Dbxref=GenBank:WP_021162370.1;Name=WP_021162370.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897275.1;locus_tag=LDO49_RS04065;product=Gfo/Idh/MocA family protein;protein_id=WP_021162370.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 20502 21428 . - . ID=gene-LDO49_RS04070;Name=LDO49_RS04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04070;old_locus_tag=BCEP4_1180016 NZ_CAJZAV010000022.1 Protein Homology CDS 20502 21428 . - 0 ID=cds-WP_059555289.1;Parent=gene-LDO49_RS04070;Dbxref=GenBank:WP_059555289.1;Name=WP_059555289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351739.1;locus_tag=LDO49_RS04070;product=TIM barrel protein;protein_id=WP_059555289.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 21447 22460 . - . ID=gene-LDO49_RS04075;Name=LDO49_RS04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04075;old_locus_tag=BCEP4_1180017 NZ_CAJZAV010000022.1 Protein Homology CDS 21447 22460 . - 0 ID=cds-WP_060074018.1;Parent=gene-LDO49_RS04075;Dbxref=GenBank:WP_060074018.1;Name=WP_060074018.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656629.1;locus_tag=LDO49_RS04075;product=Gfo/Idh/MocA family protein;protein_id=WP_060074018.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 22520 23431 . - . ID=gene-LDO49_RS04080;Name=LDO49_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04080;old_locus_tag=BCEP4_1180018 NZ_CAJZAV010000022.1 Protein Homology CDS 22520 23431 . - 0 ID=cds-WP_021162373.1;Parent=gene-LDO49_RS04080;Dbxref=GenBank:WP_021162373.1;Name=WP_021162373.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402130.1;locus_tag=LDO49_RS04080;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_021162373.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 23507 24532 . - . ID=gene-LDO49_RS04085;Name=LDO49_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04085;old_locus_tag=BCEP4_1180019 NZ_CAJZAV010000022.1 Protein Homology CDS 23507 24532 . - 0 ID=cds-WP_059484329.1;Parent=gene-LDO49_RS04085;Dbxref=GenBank:WP_059484329.1;Name=WP_059484329.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010098739.1;locus_tag=LDO49_RS04085;product=ABC transporter permease;protein_id=WP_059484329.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 24560 26143 . - . ID=gene-LDO49_RS04090;Name=LDO49_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04090;old_locus_tag=BCEP4_1180020 NZ_CAJZAV010000022.1 Protein Homology CDS 24560 26143 . - 0 ID=cds-WP_060074016.1;Parent=gene-LDO49_RS04090;Dbxref=GenBank:WP_060074016.1;Name=WP_060074016.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363686.1;locus_tag=LDO49_RS04090;product=sugar ABC transporter ATP-binding protein;protein_id=WP_060074016.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 26212 27138 . - . ID=gene-LDO49_RS04095;Name=LDO49_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04095;old_locus_tag=BCEP4_1180021 NZ_CAJZAV010000022.1 Protein Homology CDS 26212 27138 . - 0 ID=cds-WP_027787741.1;Parent=gene-LDO49_RS04095;Dbxref=GenBank:WP_027787741.1;Name=WP_027787741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213578.1;locus_tag=LDO49_RS04095;product=sugar ABC transporter substrate-binding protein;protein_id=WP_027787741.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 27455 29413 . + . ID=gene-LDO49_RS04100;Name=LDO49_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04100;old_locus_tag=BCEP4_1180023 NZ_CAJZAV010000022.1 Protein Homology CDS 27455 29413 . + 0 ID=cds-WP_060074014.1;Parent=gene-LDO49_RS04100;Dbxref=GenBank:WP_060074014.1;Name=WP_060074014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351733.1;locus_tag=LDO49_RS04100;product=bifunctional 5-dehydro-2-deoxygluconokinase/5-dehydro-2-deoxyphosphogluconate aldolase;protein_id=WP_060074014.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 29474 31357 . + . ID=gene-LDO49_RS04105;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=LDO49_RS04105;old_locus_tag=BCEP4_1180024 NZ_CAJZAV010000022.1 Protein Homology CDS 29474 31357 . + 0 ID=cds-WP_059590116.1;Parent=gene-LDO49_RS04105;Dbxref=GenBank:WP_059590116.1;Name=WP_059590116.1;Ontology_term=GO:0019310,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=hydrolase activity%2C acting on acid carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363683.1;locus_tag=LDO49_RS04105;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_059590116.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 31420 32349 . + . ID=gene-LDO49_RS04110;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=LDO49_RS04110;old_locus_tag=BCEP4_1180025 NZ_CAJZAV010000022.1 Protein Homology CDS 31420 32349 . + 0 ID=cds-WP_060074012.1;Parent=gene-LDO49_RS04110;Dbxref=GenBank:WP_060074012.1;Name=WP_060074012.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328343.1;locus_tag=LDO49_RS04110;product=myo-inosose-2 dehydratase;protein_id=WP_060074012.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 32393 33211 . + . ID=gene-LDO49_RS04115;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=LDO49_RS04115;old_locus_tag=BCEP4_1180026 NZ_CAJZAV010000022.1 Protein Homology CDS 32393 33211 . + 0 ID=cds-WP_048025939.1;Parent=gene-LDO49_RS04115;Dbxref=GenBank:WP_048025939.1;Name=WP_048025939.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481608.1;locus_tag=LDO49_RS04115;product=5-deoxy-glucuronate isomerase;protein_id=WP_048025939.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 33292 33786 . + . ID=gene-LDO49_RS04120;Name=LDO49_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04120;old_locus_tag=BCEP4_1180027 NZ_CAJZAV010000022.1 Protein Homology CDS 33292 33786 . + 0 ID=cds-WP_060074009.1;Parent=gene-LDO49_RS04120;Dbxref=GenBank:WP_060074009.1;Name=WP_060074009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497766.1;locus_tag=LDO49_RS04120;product=heme-degrading domain-containing protein;protein_id=WP_060074009.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 33839 34585 . - . ID=gene-LDO49_RS04125;Name=LDO49_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04125;old_locus_tag=BCEP4_1180029 NZ_CAJZAV010000022.1 Protein Homology CDS 33839 34585 . - 0 ID=cds-WP_060074007.1;Parent=gene-LDO49_RS04125;Dbxref=GenBank:WP_060074007.1;Name=WP_060074007.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476236.1;locus_tag=LDO49_RS04125;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_060074007.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 34770 35474 . - . ID=gene-LDO49_RS04130;Name=LDO49_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04130;old_locus_tag=BCEP4_1180030 NZ_CAJZAV010000022.1 Protein Homology CDS 34770 35474 . - 0 ID=cds-WP_059812390.1;Parent=gene-LDO49_RS04130;Dbxref=GenBank:WP_059812390.1;Name=WP_059812390.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004542439.1;locus_tag=LDO49_RS04130;product=ABC transporter ATP-binding protein;protein_id=WP_059812390.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 35471 36223 . - . ID=gene-LDO49_RS04135;Name=LDO49_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04135;old_locus_tag=BCEP4_1180031 NZ_CAJZAV010000022.1 Protein Homology CDS 35471 36223 . - 0 ID=cds-WP_060074005.1;Parent=gene-LDO49_RS04135;Dbxref=GenBank:WP_060074005.1;Name=WP_060074005.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328340.1;locus_tag=LDO49_RS04135;product=ABC transporter ATP-binding protein;protein_id=WP_060074005.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 36220 37449 . - . ID=gene-LDO49_RS04140;Name=LDO49_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04140;old_locus_tag=BCEP4_1180032 NZ_CAJZAV010000022.1 Protein Homology CDS 36220 37449 . - 0 ID=cds-WP_060074003.1;Parent=gene-LDO49_RS04140;Dbxref=GenBank:WP_060074003.1;Name=WP_060074003.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497769.1;locus_tag=LDO49_RS04140;product=branched-chain amino acid ABC transporter permease;protein_id=WP_060074003.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 37442 38377 . - . ID=gene-LDO49_RS04145;Name=LDO49_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04145;old_locus_tag=BCEP4_1180033 NZ_CAJZAV010000022.1 Protein Homology CDS 37442 38377 . - 0 ID=cds-WP_060074001.1;Parent=gene-LDO49_RS04145;Dbxref=GenBank:WP_060074001.1;Name=WP_060074001.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897291.1;locus_tag=LDO49_RS04145;product=branched-chain amino acid ABC transporter permease;protein_id=WP_060074001.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 38387 38824 . - . ID=gene-LDO49_RS04150;Name=LDO49_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04150;old_locus_tag=BCEP4_1180034 NZ_CAJZAV010000022.1 Protein Homology CDS 38387 38824 . - 0 ID=cds-WP_021157113.1;Parent=gene-LDO49_RS04150;Dbxref=GenBank:WP_021157113.1;Name=WP_021157113.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405000.1;locus_tag=LDO49_RS04150;product=acyl-CoA thioesterase;protein_id=WP_021157113.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 38964 39500 . - . ID=gene-LDO49_RS04155;Name=LDO49_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04155;old_locus_tag=BCEP4_1180035 NZ_CAJZAV010000022.1 Protein Homology CDS 38964 39500 . - 0 ID=cds-WP_059620638.1;Parent=gene-LDO49_RS04155;Dbxref=GenBank:WP_059620638.1;Name=WP_059620638.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494058.1;locus_tag=LDO49_RS04155;product=NUDIX domain-containing protein;protein_id=WP_059620638.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 39853 42536 . - . ID=gene-LDO49_RS37765;Name=LDO49_RS37765;end_range=42536,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37765;old_locus_tag=BCEP4_1180036;partial=true NZ_CAJZAV010000022.1 Protein Homology CDS 39853 42536 . - 2 ID=cds-WP_443797901.1;Parent=gene-LDO49_RS37765;Dbxref=GenBank:WP_443797901.1;Name=WP_443797901.1;end_range=42536,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365193.1;locus_tag=LDO49_RS37765;partial=true;product=beta strand repeat-containing protein;protein_id=WP_443797901.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 42547 42921 . - . ID=gene-LDO49_RS37170;Name=LDO49_RS37170;end_range=42921,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37170;old_locus_tag=BCEP4_1180037;partial=true;start_range=.,42547 NZ_CAJZAV010000022.1 Protein Homology CDS 42547 42921 . - 2 ID=cds-WP_443797904.1;Parent=gene-LDO49_RS37170;Dbxref=GenBank:WP_443797904.1;Name=WP_443797904.1;end_range=42921,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017658.6;locus_tag=LDO49_RS37170;partial=true;product=two-partner secretion domain-containing protein;protein_id=WP_443797904.1;start_range=.,42547;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 42932 43145 . - . ID=gene-LDO49_RS37770;Name=LDO49_RS37770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37770;old_locus_tag=BCEP4_1180038;partial=true;start_range=.,42932 NZ_CAJZAV010000022.1 Protein Homology CDS 42932 43145 . - 0 ID=cds-WP_443797902.1;Parent=gene-LDO49_RS37770;Dbxref=GenBank:WP_443797902.1;Name=WP_443797902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749375.1;locus_tag=LDO49_RS37770;partial=true;product=ESPR domain-containing protein;protein_id=WP_443797902.1;start_range=.,42932;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 43541 45920 . - . ID=gene-LDO49_RS04175;Name=LDO49_RS04175;end_range=45920,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04175;old_locus_tag=BCEP4_1180040;partial=true NZ_CAJZAV010000022.1 Protein Homology CDS 43541 45920 . - 1 ID=cds-WP_443797903.1;Parent=gene-LDO49_RS04175;Dbxref=GenBank:WP_443797903.1;Name=WP_443797903.1;end_range=45920,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332506.1;locus_tag=LDO49_RS04175;partial=true;product=beta strand repeat-containing protein;protein_id=WP_443797903.1;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 45931 46072 . - . ID=gene-LDO49_RS37775;Name=LDO49_RS37775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37775;old_locus_tag=BCEP4_1180041;partial=true;start_range=.,45931 NZ_CAJZAV010000022.1 Protein Homology CDS 45931 46072 . - 0 ID=cds-WP_443797905.1;Parent=gene-LDO49_RS37775;Dbxref=GenBank:WP_443797905.1;Name=WP_443797905.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024418.6;locus_tag=LDO49_RS37775;partial=true;product=ESPR domain-containing protein;protein_id=WP_443797905.1;start_range=.,45931;transl_table=11 NZ_CAJZAV010000022.1 RefSeq gene 46354 49074 . - . ID=gene-LDO49_RS04180;Name=LDO49_RS04180;end_range=49074,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04180;old_locus_tag=BCEP4_1180042;partial=true NZ_CAJZAV010000022.1 Protein Homology CDS 46354 49074 . - 0 ID=cds-WP_224051448.1;Parent=gene-LDO49_RS04180;Dbxref=GenBank:WP_224051448.1;Name=WP_224051448.1;end_range=49074,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332505.1;locus_tag=LDO49_RS04180;partial=true;product=beta strand repeat-containing protein;protein_id=WP_224051448.1;transl_table=11 ##sequence-region NZ_CAJZAV010000023.1 1 1131 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000023.1 RefSeq region 1 1131 . + . ID=NZ_CAJZAV010000023.1:1..1131;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_119 NZ_CAJZAV010000023.1 RefSeq gene 1 234 . - . ID=gene-LDO49_RS37780;Name=LDO49_RS37780;end_range=234,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37780;partial=true;start_range=.,1 NZ_CAJZAV010000023.1 Protein Homology CDS 1 234 . - 0 ID=cds-WP_443797906.1;Parent=gene-LDO49_RS37780;Dbxref=GenBank:WP_443797906.1;Name=WP_443797906.1;end_range=234,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216420.1;locus_tag=LDO49_RS37780;partial=true;product=hypothetical protein;protein_id=WP_443797906.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000023.1 RefSeq pseudogene 245 1034 . - . ID=gene-LDO49_RS37785;Name=LDO49_RS37785;end_range=1034,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37785;partial=true;pseudo=true;start_range=.,245 NZ_CAJZAV010000023.1 Protein Homology CDS 245 1034 . - 0 ID=cds-LDO49_RS37785;Parent=gene-LDO49_RS37785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1034,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339442.1;locus_tag=LDO49_RS37785;partial=true;product=cell surface protein;pseudo=true;start_range=.,245;transl_table=11 ##sequence-region NZ_CAJZAV010000024.1 1 73828 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000024.1 RefSeq region 1 73828 . + . ID=NZ_CAJZAV010000024.1:1..73828;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_12 NZ_CAJZAV010000024.1 RefSeq gene 1 293 . - . ID=gene-LDO49_RS04190;Name=LDO49_RS04190;end_range=293,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04190;partial=true;start_range=.,1 NZ_CAJZAV010000024.1 Protein Homology CDS 1 293 . - 0 ID=cds-WP_443797907.1;Parent=gene-LDO49_RS04190;Dbxref=GenBank:WP_443797907.1;Name=WP_443797907.1;Ontology_term=GO:0022857,GO:0016020;end_range=293,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527621.1;locus_tag=LDO49_RS04190;partial=true;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_443797907.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 366 1382 . - . ID=gene-LDO49_RS04195;Name=LDO49_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04195;old_locus_tag=BCEP4_120002 NZ_CAJZAV010000024.1 Protein Homology CDS 366 1382 . - 0 ID=cds-WP_224051449.1;Parent=gene-LDO49_RS04195;Dbxref=GenBank:WP_224051449.1;Name=WP_224051449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328284.1;locus_tag=LDO49_RS04195;product=ABC transporter substrate-binding protein;protein_id=WP_224051449.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 1379 2146 . - . ID=gene-LDO49_RS04200;Name=LDO49_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04200;old_locus_tag=BCEP4_120003 NZ_CAJZAV010000024.1 Protein Homology CDS 1379 2146 . - 0 ID=cds-WP_059627677.1;Parent=gene-LDO49_RS04200;Dbxref=GenBank:WP_059627677.1;Name=WP_059627677.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754735.1;locus_tag=LDO49_RS04200;product=ABC transporter ATP-binding protein;protein_id=WP_059627677.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 2176 4266 . - . ID=gene-LDO49_RS04205;Name=LDO49_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04205;old_locus_tag=BCEP4_120004 NZ_CAJZAV010000024.1 Protein Homology CDS 2176 4266 . - 0 ID=cds-WP_060074734.1;Parent=gene-LDO49_RS04205;Dbxref=GenBank:WP_060074734.1;Name=WP_060074734.1;Ontology_term=GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351655.1;locus_tag=LDO49_RS04205;product=TonB-dependent receptor;protein_id=WP_060074734.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 4762 5670 . - . ID=gene-LDO49_RS04210;Name=LDO49_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04210;old_locus_tag=BCEP4_120006 NZ_CAJZAV010000024.1 Protein Homology CDS 4762 5670 . - 0 ID=cds-WP_060074735.1;Parent=gene-LDO49_RS04210;Dbxref=GenBank:WP_060074735.1;Name=WP_060074735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490525.1;locus_tag=LDO49_RS04210;product=SphA family protein;protein_id=WP_060074735.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 5833 6756 . - . ID=gene-LDO49_RS04215;Name=LDO49_RS04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04215;old_locus_tag=BCEP4_120007 NZ_CAJZAV010000024.1 Protein Homology CDS 5833 6756 . - 0 ID=cds-WP_048025879.1;Parent=gene-LDO49_RS04215;Dbxref=GenBank:WP_048025879.1;Name=WP_048025879.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497576.1;locus_tag=LDO49_RS04215;product=LysR family transcriptional regulator;protein_id=WP_048025879.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 6874 7755 . + . ID=gene-LDO49_RS04220;Name=LDO49_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04220;old_locus_tag=BCEP4_120008 NZ_CAJZAV010000024.1 Protein Homology CDS 6874 7755 . + 0 ID=cds-WP_224051450.1;Parent=gene-LDO49_RS04220;Dbxref=GenBank:WP_224051450.1;Name=WP_224051450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490560.1;locus_tag=LDO49_RS04220;product=intradiol ring-cleavage dioxygenase;protein_id=WP_224051450.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 7752 8054 . + . ID=gene-LDO49_RS04225;Name=LDO49_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04225;old_locus_tag=BCEP4_120009 NZ_CAJZAV010000024.1 Protein Homology CDS 7752 8054 . + 0 ID=cds-WP_021157231.1;Parent=gene-LDO49_RS04225;Dbxref=GenBank:WP_021157231.1;Name=WP_021157231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351651.1;locus_tag=LDO49_RS04225;product=Dabb family protein;protein_id=WP_021157231.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 8062 9129 . + . ID=gene-LDO49_RS04230;Name=LDO49_RS04230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04230;old_locus_tag=BCEP4_120010 NZ_CAJZAV010000024.1 Protein Homology CDS 8062 9129 . + 0 ID=cds-WP_224051452.1;Parent=gene-LDO49_RS04230;Dbxref=GenBank:WP_224051452.1;Name=WP_224051452.1;Ontology_term=GO:0018506,GO:0030554,GO:0046872;gbkey=CDS;go_function=maleylacetate reductase activity|0018506||IEA,adenyl nucleotide binding|0030554||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490547.1;locus_tag=LDO49_RS04230;product=maleylacetate reductase;protein_id=WP_224051452.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 9180 10847 . + . ID=gene-LDO49_RS04235;Name=mhpA;gbkey=Gene;gene=mhpA;gene_biotype=protein_coding;locus_tag=LDO49_RS04235;old_locus_tag=BCEP4_120011 NZ_CAJZAV010000024.1 Protein Homology CDS 9180 10847 . + 0 ID=cds-WP_224051454.1;Parent=gene-LDO49_RS04235;Dbxref=GenBank:WP_224051454.1;Name=WP_224051454.1;Ontology_term=GO:0019622,GO:0008688;gbkey=CDS;gene=mhpA;go_function=3-(3-hydroxyphenyl)propionate hydroxylase activity|0008688||IEA;go_process=3-(3-hydroxy)phenylpropionate catabolic process|0019622||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351649.1;locus_tag=LDO49_RS04235;product=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase MhpA;protein_id=WP_224051454.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 10861 11937 . + . ID=gene-LDO49_RS04240;Name=LDO49_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04240;old_locus_tag=BCEP4_120012 NZ_CAJZAV010000024.1 Protein Homology CDS 10861 11937 . + 0 ID=cds-WP_224051456.1;Parent=gene-LDO49_RS04240;Dbxref=GenBank:WP_224051456.1;Name=WP_224051456.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351648.1;locus_tag=LDO49_RS04240;product=alpha/beta hydrolase family protein;protein_id=WP_224051456.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 12121 12561 . - . ID=gene-LDO49_RS04245;Name=LDO49_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04245;old_locus_tag=BCEP4_120014 NZ_CAJZAV010000024.1 Protein Homology CDS 12121 12561 . - 0 ID=cds-WP_059486766.1;Parent=gene-LDO49_RS04245;Dbxref=GenBank:WP_059486766.1;Name=WP_059486766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698024.1;locus_tag=LDO49_RS04245;product=nuclear transport factor 2 family protein;protein_id=WP_059486766.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 12605 14629 . - . ID=gene-LDO49_RS04250;Name=LDO49_RS04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04250;old_locus_tag=BCEP4_120015 NZ_CAJZAV010000024.1 Protein Homology CDS 12605 14629 . - 0 ID=cds-WP_224051457.1;Parent=gene-LDO49_RS04250;Dbxref=GenBank:WP_224051457.1;Name=WP_224051457.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490590.1;locus_tag=LDO49_RS04250;product=oxidoreductase;protein_id=WP_224051457.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 14780 15316 . + . ID=gene-LDO49_RS04255;Name=LDO49_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04255;old_locus_tag=BCEP4_120016 NZ_CAJZAV010000024.1 Protein Homology CDS 14780 15316 . + 0 ID=cds-WP_175926125.1;Parent=gene-LDO49_RS04255;Dbxref=GenBank:WP_175926125.1;Name=WP_175926125.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490577.1;locus_tag=LDO49_RS04255;product=PadR family transcriptional regulator;protein_id=WP_175926125.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 15415 16395 . - . ID=gene-LDO49_RS04260;Name=LDO49_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04260;old_locus_tag=BCEP4_120017 NZ_CAJZAV010000024.1 Protein Homology CDS 15415 16395 . - 0 ID=cds-WP_124842371.1;Parent=gene-LDO49_RS04260;Dbxref=GenBank:WP_124842371.1;Name=WP_124842371.1;Ontology_term=GO:0016491,GO:0016655,GO:0048038,GO:0070402;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405037.1;locus_tag=LDO49_RS04260;product=NADPH:quinone oxidoreductase family protein;protein_id=WP_124842371.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 16544 18373 . - . ID=gene-LDO49_RS04265;Name=LDO49_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04265;old_locus_tag=BCEP4_120018 NZ_CAJZAV010000024.1 Protein Homology CDS 16544 18373 . - 0 ID=cds-WP_124842369.1;Parent=gene-LDO49_RS04265;Dbxref=GenBank:WP_124842369.1;Name=WP_124842369.1;Ontology_term=GO:0006631,GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754737.1;locus_tag=LDO49_RS04265;product=acyl-CoA dehydrogenase;protein_id=WP_124842369.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 18482 19249 . - . ID=gene-LDO49_RS04270;Name=LDO49_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04270;old_locus_tag=BCEP4_120019 NZ_CAJZAV010000024.1 Protein Homology CDS 18482 19249 . - 0 ID=cds-WP_059649344.1;Parent=gene-LDO49_RS04270;Dbxref=GenBank:WP_059649344.1;Name=WP_059649344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490608.1;locus_tag=LDO49_RS04270;product=class II aldolase/adducin family protein;protein_id=WP_059649344.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 19318 21642 . - . ID=gene-LDO49_RS04275;Name=LDO49_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04275;old_locus_tag=BCEP4_120020 NZ_CAJZAV010000024.1 Protein Homology CDS 19318 21642 . - 0 ID=cds-WP_224051458.1;Parent=gene-LDO49_RS04275;Dbxref=GenBank:WP_224051458.1;Name=WP_224051458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490526.1;locus_tag=LDO49_RS04275;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=WP_224051458.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 21639 22100 . - . ID=gene-LDO49_RS04280;Name=LDO49_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04280;old_locus_tag=BCEP4_120021 NZ_CAJZAV010000024.1 Protein Homology CDS 21639 22100 . - 0 ID=cds-WP_021157241.1;Parent=gene-LDO49_RS04280;Dbxref=GenBank:WP_021157241.1;Name=WP_021157241.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351636.1;locus_tag=LDO49_RS04280;product=(2Fe-2S)-binding protein;protein_id=WP_021157241.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 22703 23920 . - . ID=gene-LDO49_RS04285;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=LDO49_RS04285;old_locus_tag=BCEP4_120023 NZ_CAJZAV010000024.1 Protein Homology CDS 22703 23920 . - 0 ID=cds-WP_048025864.1;Parent=gene-LDO49_RS04285;Dbxref=GenBank:WP_048025864.1;Name=WP_048025864.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351632.1;locus_tag=LDO49_RS04285;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_048025864.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 25224 26312 . + . ID=gene-LDO49_RS04290;Name=LDO49_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04290;old_locus_tag=BCEP4_120024 NZ_CAJZAV010000024.1 Protein Homology CDS 25224 26312 . + 0 ID=cds-WP_059706809.1;Parent=gene-LDO49_RS04290;Dbxref=GenBank:WP_059706809.1;Name=WP_059706809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497593.1;locus_tag=LDO49_RS04290;product=hypothetical protein;protein_id=WP_059706809.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 26362 28179 . + . ID=gene-LDO49_RS04295;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LDO49_RS04295;old_locus_tag=BCEP4_120025 NZ_CAJZAV010000024.1 Protein Homology CDS 26362 28179 . + 0 ID=cds-WP_060323593.1;Parent=gene-LDO49_RS04295;Dbxref=GenBank:WP_060323593.1;Name=WP_060323593.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004549145.1;locus_tag=LDO49_RS04295;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_060323593.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 28228 28304 . - . ID=gene-LDO49_RS04300;Name=LDO49_RS04300;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS04300;old_locus_tag=BCEP4_TRNA44 NZ_CAJZAV010000024.1 tRNAscan-SE tRNA 28228 28304 . - . ID=rna-LDO49_RS04300;Parent=gene-LDO49_RS04300;anticodon=(pos:complement(28268..28270));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS04300;product=tRNA-Arg NZ_CAJZAV010000024.1 tRNAscan-SE exon 28228 28304 . - . ID=exon-LDO49_RS04300-1;Parent=rna-LDO49_RS04300;anticodon=(pos:complement(28268..28270));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS04300;product=tRNA-Arg NZ_CAJZAV010000024.1 RefSeq gene 28486 29316 . - . ID=gene-LDO49_RS04305;Name=LDO49_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04305;old_locus_tag=BCEP4_120027 NZ_CAJZAV010000024.1 Protein Homology CDS 28486 29316 . - 0 ID=cds-WP_021157259.1;Parent=gene-LDO49_RS04305;Dbxref=GenBank:WP_021157259.1;Name=WP_021157259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545102.1;locus_tag=LDO49_RS04305;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_021157259.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 29796 30707 . + . ID=gene-LDO49_RS04310;Name=LDO49_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04310;old_locus_tag=BCEP4_120029 NZ_CAJZAV010000024.1 Protein Homology CDS 29796 30707 . + 0 ID=cds-WP_060231062.1;Parent=gene-LDO49_RS04310;Dbxref=GenBank:WP_060231062.1;Name=WP_060231062.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545101.1;locus_tag=LDO49_RS04310;product=aldose epimerase family protein;protein_id=WP_060231062.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 30849 31550 . + . ID=gene-LDO49_RS04315;Name=LDO49_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04315;old_locus_tag=BCEP4_120030 NZ_CAJZAV010000024.1 Protein Homology CDS 30849 31550 . + 0 ID=cds-WP_048025802.1;Parent=gene-LDO49_RS04315;Dbxref=GenBank:WP_048025802.1;Name=WP_048025802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417339.1;locus_tag=LDO49_RS04315;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_048025802.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 31918 33537 . + . ID=gene-LDO49_RS04320;Name=LDO49_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04320;old_locus_tag=BCEP4_120032 NZ_CAJZAV010000024.1 Protein Homology CDS 31918 33537 . + 0 ID=cds-WP_060231059.1;Parent=gene-LDO49_RS04320;Dbxref=GenBank:WP_060231059.1;Name=WP_060231059.1;Ontology_term=GO:0006631,GO:0005524,GO:0016405,GO:0120225;gbkey=CDS;go_function=ATP binding|0005524||IEA,CoA-ligase activity|0016405||IEA,coenzyme A binding|0120225||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750330.1;locus_tag=LDO49_RS04320;product=acyl-CoA synthetase;protein_id=WP_060231059.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 33614 33937 . + . ID=gene-LDO49_RS04325;Name=LDO49_RS04325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04325;old_locus_tag=BCEP4_120033 NZ_CAJZAV010000024.1 Protein Homology CDS 33614 33937 . + 0 ID=cds-WP_027787860.1;Parent=gene-LDO49_RS04325;Dbxref=GenBank:WP_027787860.1;Name=WP_027787860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405071.1;locus_tag=LDO49_RS04325;product=DUF2288 domain-containing protein;protein_id=WP_027787860.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 33948 35318 . + . ID=gene-LDO49_RS04330;Name=LDO49_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04330;old_locus_tag=BCEP4_120034 NZ_CAJZAV010000024.1 Protein Homology CDS 33948 35318 . + 0 ID=cds-WP_224051459.1;Parent=gene-LDO49_RS04330;Dbxref=GenBank:WP_224051459.1;Name=WP_224051459.1;Ontology_term=GO:0006855,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476321.1;locus_tag=LDO49_RS04330;product=MATE family efflux transporter;protein_id=WP_224051459.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 35378 35554 . - . ID=gene-LDO49_RS04335;Name=LDO49_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04335;old_locus_tag=BCEP4_120035 NZ_CAJZAV010000024.1 Protein Homology CDS 35378 35554 . - 0 ID=cds-WP_021157264.1;Parent=gene-LDO49_RS04335;Dbxref=GenBank:WP_021157264.1;Name=WP_021157264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409019.1;locus_tag=LDO49_RS04335;product=hypothetical protein;protein_id=WP_021157264.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 35691 35861 . + . ID=gene-LDO49_RS04340;Name=LDO49_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04340;old_locus_tag=BCEP4_120036 NZ_CAJZAV010000024.1 Protein Homology CDS 35691 35861 . + 0 ID=cds-WP_021157265.1;Parent=gene-LDO49_RS04340;Dbxref=GenBank:WP_021157265.1;Name=WP_021157265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191316.1;locus_tag=LDO49_RS04340;product=hypothetical protein;protein_id=WP_021157265.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 36071 36877 . - . ID=gene-LDO49_RS04345;Name=LDO49_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04345;old_locus_tag=BCEP4_120037 NZ_CAJZAV010000024.1 Protein Homology CDS 36071 36877 . - 0 ID=cds-WP_021157266.1;Parent=gene-LDO49_RS04345;Dbxref=GenBank:WP_021157266.1;Name=WP_021157266.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092640.1;locus_tag=LDO49_RS04345;product=GNAT family N-acetyltransferase;protein_id=WP_021157266.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 37048 37509 . - . ID=gene-LDO49_RS04350;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=LDO49_RS04350;old_locus_tag=BCEP4_120038 NZ_CAJZAV010000024.1 Protein Homology CDS 37048 37509 . - 0 ID=cds-WP_042973255.1;Parent=gene-LDO49_RS04350;Dbxref=GenBank:WP_042973255.1;Name=WP_042973255.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545096.1;locus_tag=LDO49_RS04350;product=phosphohistidine phosphatase SixA;protein_id=WP_042973255.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 37671 37747 . + . ID=gene-LDO49_RS04355;Name=LDO49_RS04355;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS04355;old_locus_tag=BCEP4_TRNA9 NZ_CAJZAV010000024.1 tRNAscan-SE tRNA 37671 37747 . + . ID=rna-LDO49_RS04355;Parent=gene-LDO49_RS04355;anticodon=(pos:37705..37707);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS04355;product=tRNA-Pro NZ_CAJZAV010000024.1 tRNAscan-SE exon 37671 37747 . + . ID=exon-LDO49_RS04355-1;Parent=rna-LDO49_RS04355;anticodon=(pos:37705..37707);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS04355;product=tRNA-Pro NZ_CAJZAV010000024.1 RefSeq gene 37845 38426 . - . ID=gene-LDO49_RS04360;Name=LDO49_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04360;old_locus_tag=BCEP4_120039 NZ_CAJZAV010000024.1 Protein Homology CDS 37845 38426 . - 0 ID=cds-WP_224051460.1;Parent=gene-LDO49_RS04360;Dbxref=GenBank:WP_224051460.1;Name=WP_224051460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008921747.1;locus_tag=LDO49_RS04360;product=hypothetical protein;protein_id=WP_224051460.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 38582 38905 . + . ID=gene-LDO49_RS04365;Name=LDO49_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04365;old_locus_tag=BCEP4_120041 NZ_CAJZAV010000024.1 GeneMarkS-2+ CDS 38582 38905 . + 0 ID=cds-WP_059706823.1;Parent=gene-LDO49_RS04365;Dbxref=GenBank:WP_059706823.1;Name=WP_059706823.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS04365;product=hypothetical protein;protein_id=WP_059706823.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 38985 39383 . + . ID=gene-LDO49_RS04370;Name=LDO49_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04370;old_locus_tag=BCEP4_120042 NZ_CAJZAV010000024.1 GeneMarkS-2+ CDS 38985 39383 . + 0 ID=cds-WP_224051461.1;Parent=gene-LDO49_RS04370;Dbxref=GenBank:WP_224051461.1;Name=WP_224051461.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS04370;product=DUF3592 domain-containing protein;protein_id=WP_224051461.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 39562 39996 . + . ID=gene-LDO49_RS04375;Name=LDO49_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04375;old_locus_tag=BCEP4_120043 NZ_CAJZAV010000024.1 Protein Homology CDS 39562 39996 . + 0 ID=cds-WP_224051462.1;Parent=gene-LDO49_RS04375;Dbxref=GenBank:WP_224051462.1;Name=WP_224051462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476329.1;locus_tag=LDO49_RS04375;product=hypothetical protein;protein_id=WP_224051462.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 40073 41587 . - . ID=gene-LDO49_RS04380;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=LDO49_RS04380;old_locus_tag=BCEP4_120044 NZ_CAJZAV010000024.1 Protein Homology CDS 40073 41587 . - 0 ID=cds-WP_027787866.1;Parent=gene-LDO49_RS04380;Dbxref=GenBank:WP_027787866.1;Name=WP_027787866.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009970405.1;locus_tag=LDO49_RS04380;product=exopolyphosphatase;protein_id=WP_027787866.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 41866 43929 . + . ID=gene-LDO49_RS04385;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=LDO49_RS04385;old_locus_tag=BCEP4_120045 NZ_CAJZAV010000024.1 Protein Homology CDS 41866 43929 . + 0 ID=cds-WP_021157273.1;Parent=gene-LDO49_RS04385;Dbxref=GenBank:WP_021157273.1;Name=WP_021157273.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041492798.1;locus_tag=LDO49_RS04385;product=polyphosphate kinase 1;protein_id=WP_021157273.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 44057 45376 . - . ID=gene-LDO49_RS04390;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=LDO49_RS04390;old_locus_tag=BCEP4_120046 NZ_CAJZAV010000024.1 Protein Homology CDS 44057 45376 . - 0 ID=cds-WP_021157274.1;Parent=gene-LDO49_RS04390;Dbxref=GenBank:WP_021157274.1;Name=WP_021157274.1;Ontology_term=GO:0000160,GO:0006796,GO:0006817,GO:0000155;gbkey=CDS;gene=phoR;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphate-containing compound metabolic process|0006796||IEA,phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332665.1;locus_tag=LDO49_RS04390;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_021157274.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 45434 46135 . - . ID=gene-LDO49_RS04395;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=LDO49_RS04395;old_locus_tag=BCEP4_120047 NZ_CAJZAV010000024.1 Protein Homology CDS 45434 46135 . - 0 ID=cds-WP_027787869.1;Parent=gene-LDO49_RS04395;Dbxref=GenBank:WP_027787869.1;Name=WP_027787869.1;Ontology_term=GO:0000160,GO:0006355,GO:0006817,GO:0000156,GO:0003677;gbkey=CDS;gene=phoB;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332664.1;locus_tag=LDO49_RS04395;product=phosphate regulon transcriptional regulator PhoB;protein_id=WP_027787869.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 46167 46871 . - . ID=gene-LDO49_RS04400;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=LDO49_RS04400;old_locus_tag=BCEP4_120048 NZ_CAJZAV010000024.1 Protein Homology CDS 46167 46871 . - 0 ID=cds-WP_021157276.1;Parent=gene-LDO49_RS04400;Dbxref=GenBank:WP_021157276.1;Name=WP_021157276.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351613.1;locus_tag=LDO49_RS04400;product=phosphate signaling complex protein PhoU;protein_id=WP_021157276.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 46890 47738 . - . ID=gene-LDO49_RS04405;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=LDO49_RS04405;old_locus_tag=BCEP4_120049 NZ_CAJZAV010000024.1 Protein Homology CDS 46890 47738 . - 0 ID=cds-WP_021157277.1;Parent=gene-LDO49_RS04405;Dbxref=GenBank:WP_021157277.1;Name=WP_021157277.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401039.1;locus_tag=LDO49_RS04405;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_021157277.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 47754 48647 . - . ID=gene-LDO49_RS04410;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=LDO49_RS04410;old_locus_tag=BCEP4_120050 NZ_CAJZAV010000024.1 Protein Homology CDS 47754 48647 . - 0 ID=cds-WP_021157278.1;Parent=gene-LDO49_RS04410;Dbxref=GenBank:WP_021157278.1;Name=WP_021157278.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906011.1;locus_tag=LDO49_RS04410;product=phosphate ABC transporter permease PstA;protein_id=WP_021157278.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 48644 49630 . - . ID=gene-LDO49_RS04415;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=LDO49_RS04415;old_locus_tag=BCEP4_120051 NZ_CAJZAV010000024.1 Protein Homology CDS 48644 49630 . - 0 ID=cds-WP_021157279.1;Parent=gene-LDO49_RS04415;Dbxref=GenBank:WP_021157279.1;Name=WP_021157279.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417346.1;locus_tag=LDO49_RS04415;product=phosphate ABC transporter permease PstC;protein_id=WP_021157279.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 49725 50759 . - . ID=gene-LDO49_RS04420;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=LDO49_RS04420;old_locus_tag=BCEP4_120052 NZ_CAJZAV010000024.1 Protein Homology CDS 49725 50759 . - 0 ID=cds-WP_048025401.1;Parent=gene-LDO49_RS04420;Dbxref=GenBank:WP_048025401.1;Name=WP_048025401.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363555.1;locus_tag=LDO49_RS04420;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_048025401.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 51213 52568 . - . ID=gene-LDO49_RS04425;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=LDO49_RS04425;old_locus_tag=BCEP4_120054 NZ_CAJZAV010000024.1 Protein Homology CDS 51213 52568 . - 0 ID=cds-WP_021163356.1;Parent=gene-LDO49_RS04425;Dbxref=GenBank:WP_021163356.1;Name=WP_021163356.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004542480.1;locus_tag=LDO49_RS04425;product=phosphoglucosamine mutase;protein_id=WP_021163356.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 52597 53490 . - . ID=gene-LDO49_RS04430;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=LDO49_RS04430;old_locus_tag=BCEP4_120055 NZ_CAJZAV010000024.1 Protein Homology CDS 52597 53490 . - 0 ID=cds-WP_372585827.1;Parent=gene-LDO49_RS04430;Dbxref=GenBank:WP_372585827.1;Name=WP_372585827.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405091.1;locus_tag=LDO49_RS04430;product=dihydropteroate synthase;protein_id=WP_372585827.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 53569 55467 . - . ID=gene-LDO49_RS04435;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=LDO49_RS04435;old_locus_tag=BCEP4_120056 NZ_CAJZAV010000024.1 Protein Homology CDS 53569 55467 . - 0 ID=cds-WP_021163358.1;Parent=gene-LDO49_RS04435;Dbxref=GenBank:WP_021163358.1;Name=WP_021163358.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490511.1;locus_tag=LDO49_RS04435;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_021163358.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 55634 56296 . - . ID=gene-LDO49_RS04440;Name=LDO49_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04440;old_locus_tag=BCEP4_120058 NZ_CAJZAV010000024.1 Protein Homology CDS 55634 56296 . - 0 ID=cds-WP_021163359.1;Parent=gene-LDO49_RS04440;Dbxref=GenBank:WP_021163359.1;Name=WP_021163359.1;Ontology_term=GO:0001510,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009911930.1;locus_tag=LDO49_RS04440;product=RlmE family RNA methyltransferase;protein_id=WP_021163359.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 56490 57017 . + . ID=gene-LDO49_RS04445;Name=LDO49_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04445;old_locus_tag=BCEP4_120060 NZ_CAJZAV010000024.1 Protein Homology CDS 56490 57017 . + 0 ID=cds-WP_059486740.1;Parent=gene-LDO49_RS04445;Dbxref=GenBank:WP_059486740.1;Name=WP_059486740.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363551.1;locus_tag=LDO49_RS04445;product=YhbY family RNA-binding protein;protein_id=WP_059486740.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 57091 57549 . - . ID=gene-LDO49_RS04450;Name=LDO49_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04450;old_locus_tag=BCEP4_120061 NZ_CAJZAV010000024.1 Protein Homology CDS 57091 57549 . - 0 ID=cds-WP_021163361.1;Parent=gene-LDO49_RS04450;Dbxref=GenBank:WP_021163361.1;Name=WP_021163361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213687.1;locus_tag=LDO49_RS04450;product=DUF4149 domain-containing protein;protein_id=WP_021163361.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 57564 58040 . - . ID=gene-LDO49_RS04455;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=LDO49_RS04455;old_locus_tag=BCEP4_120062 NZ_CAJZAV010000024.1 Protein Homology CDS 57564 58040 . - 0 ID=cds-WP_021163362.1;Parent=gene-LDO49_RS04455;Dbxref=GenBank:WP_021163362.1;Name=WP_021163362.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534614.1;locus_tag=LDO49_RS04455;product=transcription elongation factor GreA;protein_id=WP_021163362.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 58159 61413 . - . ID=gene-LDO49_RS04460;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=LDO49_RS04460;old_locus_tag=BCEP4_120063 NZ_CAJZAV010000024.1 Protein Homology CDS 58159 61413 . - 0 ID=cds-WP_021163363.1;Parent=gene-LDO49_RS04460;Dbxref=GenBank:WP_021163363.1;Name=WP_021163363.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193866.1;locus_tag=LDO49_RS04460;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_021163363.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 61463 62122 . - . ID=gene-LDO49_RS04465;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=LDO49_RS04465;old_locus_tag=BCEP4_120064 NZ_CAJZAV010000024.1 Protein Homology CDS 61463 62122 . - 0 ID=cds-WP_021163364.1;Parent=gene-LDO49_RS04465;Dbxref=GenBank:WP_021163364.1;Name=WP_021163364.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192135.1;locus_tag=LDO49_RS04465;product=leucine efflux protein LeuE;protein_id=WP_021163364.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 62160 63305 . - . ID=gene-LDO49_RS04470;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=LDO49_RS04470;old_locus_tag=BCEP4_120065 NZ_CAJZAV010000024.1 Protein Homology CDS 62160 63305 . - 0 ID=cds-WP_060055090.1;Parent=gene-LDO49_RS04470;Dbxref=GenBank:WP_060055090.1;Name=WP_060055090.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092675.1;locus_tag=LDO49_RS04470;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_060055090.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 63671 64888 . - . ID=gene-LDO49_RS04475;Name=LDO49_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04475;old_locus_tag=BCEP4_120066 NZ_CAJZAV010000024.1 Protein Homology CDS 63671 64888 . - 0 ID=cds-WP_060055094.1;Parent=gene-LDO49_RS04475;Dbxref=GenBank:WP_060055094.1;Name=WP_060055094.1;Ontology_term=GO:0055085,GO:0015112,GO:0022857;gbkey=CDS;go_function=nitrate transmembrane transporter activity|0015112||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497617.1;locus_tag=LDO49_RS04475;product=MFS transporter;protein_id=WP_060055094.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 65049 66626 . - . ID=gene-LDO49_RS04480;Name=LDO49_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04480;old_locus_tag=BCEP4_120067 NZ_CAJZAV010000024.1 Protein Homology CDS 65049 66626 . - 0 ID=cds-WP_060058123.1;Parent=gene-LDO49_RS04480;Dbxref=GenBank:WP_060058123.1;Name=WP_060058123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694247.1;locus_tag=LDO49_RS04480;product=transglycosylase SLT domain-containing protein;protein_id=WP_060058123.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 66778 67584 . - . ID=gene-LDO49_RS04485;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=LDO49_RS04485;old_locus_tag=BCEP4_120068 NZ_CAJZAV010000024.1 Protein Homology CDS 66778 67584 . - 0 ID=cds-WP_027787881.1;Parent=gene-LDO49_RS04485;Dbxref=GenBank:WP_027787881.1;Name=WP_027787881.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600438.1;locus_tag=LDO49_RS04485;product=hydroxyacylglutathione hydrolase;protein_id=WP_027787881.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 67603 68415 . + . ID=gene-LDO49_RS04490;Name=LDO49_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04490;old_locus_tag=BCEP4_120069 NZ_CAJZAV010000024.1 Protein Homology CDS 67603 68415 . + 0 ID=cds-WP_027787882.1;Parent=gene-LDO49_RS04490;Dbxref=GenBank:WP_027787882.1;Name=WP_027787882.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004556858.1;locus_tag=LDO49_RS04490;product=class I SAM-dependent methyltransferase;protein_id=WP_027787882.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 68412 68855 . + . ID=gene-LDO49_RS04495;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=LDO49_RS04495;old_locus_tag=BCEP4_120070 NZ_CAJZAV010000024.1 Protein Homology CDS 68412 68855 . + 0 ID=cds-WP_021163370.1;Parent=gene-LDO49_RS04495;Dbxref=GenBank:WP_021163370.1;Name=WP_021163370.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764660.1;locus_tag=LDO49_RS04495;product=ribonuclease HI;protein_id=WP_021163370.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 68893 69627 . + . ID=gene-LDO49_RS04500;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=LDO49_RS04500;old_locus_tag=BCEP4_120071 NZ_CAJZAV010000024.1 Protein Homology CDS 68893 69627 . + 0 ID=cds-WP_224051463.1;Parent=gene-LDO49_RS04500;Dbxref=GenBank:WP_224051463.1;Name=WP_224051463.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656490.1;locus_tag=LDO49_RS04500;product=DNA polymerase III subunit epsilon;protein_id=WP_224051463.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 69662 69994 . - . ID=gene-LDO49_RS04505;Name=LDO49_RS04505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04505;old_locus_tag=BCEP4_120072 NZ_CAJZAV010000024.1 Protein Homology CDS 69662 69994 . - 0 ID=cds-WP_059527239.1;Parent=gene-LDO49_RS04505;Dbxref=GenBank:WP_059527239.1;Name=WP_059527239.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656489.1;locus_tag=LDO49_RS04505;product=YnfA family protein;protein_id=WP_059527239.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 70534 72021 . + . ID=gene-LDO49_RS04510;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=LDO49_RS04510;old_locus_tag=BCEP4_120073 NZ_CAJZAV010000024.1 Protein Homology CDS 70534 72021 . + 0 ID=cds-WP_027787885.1;Parent=gene-LDO49_RS04510;Dbxref=GenBank:WP_027787885.1;Name=WP_027787885.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332641.1;locus_tag=LDO49_RS04510;product=glycine betaine/L-proline transporter ProP;protein_id=WP_027787885.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 72130 72336 . - . ID=gene-LDO49_RS04515;Name=LDO49_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04515;old_locus_tag=BCEP4_120074 NZ_CAJZAV010000024.1 Protein Homology CDS 72130 72336 . - 0 ID=cds-WP_042977865.1;Parent=gene-LDO49_RS04515;Dbxref=GenBank:WP_042977865.1;Name=WP_042977865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491323.1;locus_tag=LDO49_RS04515;product=hypothetical protein;protein_id=WP_042977865.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq gene 72510 73139 . - . ID=gene-LDO49_RS04520;Name=LDO49_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04520;old_locus_tag=BCEP4_120075 NZ_CAJZAV010000024.1 Protein Homology CDS 72510 73139 . - 0 ID=cds-WP_224051464.1;Parent=gene-LDO49_RS04520;Dbxref=GenBank:WP_224051464.1;Name=WP_224051464.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332639.1;locus_tag=LDO49_RS04520;product=glutathione S-transferase family protein;protein_id=WP_224051464.1;transl_table=11 NZ_CAJZAV010000024.1 RefSeq pseudogene 73311 73828 . + . ID=gene-LDO49_RS04525;Name=LDO49_RS04525;end_range=73828,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS04525;partial=true;pseudo=true NZ_CAJZAV010000024.1 Protein Homology CDS 73311 73828 . + 0 ID=cds-LDO49_RS04525;Parent=gene-LDO49_RS04525;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=73828,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497625.1;locus_tag=LDO49_RS04525;partial=true;product=polyhydroxyalkanoate depolymerase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000025.1 1 25624 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000025.1 RefSeq region 1 25624 . + . ID=NZ_CAJZAV010000025.1:1..25624;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_120 NZ_CAJZAV010000025.1 RefSeq gene 66 944 . - . ID=gene-LDO49_RS04530;Name=LDO49_RS04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04530;old_locus_tag=BCEP4_1200001 NZ_CAJZAV010000025.1 Protein Homology CDS 66 944 . - 0 ID=cds-WP_224051465.1;Parent=gene-LDO49_RS04530;Dbxref=GenBank:WP_224051465.1;Name=WP_224051465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694599.1;locus_tag=LDO49_RS04530;product=aldo/keto reductase family oxidoreductase;protein_id=WP_224051465.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 1040 1939 . + . ID=gene-LDO49_RS04535;Name=LDO49_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04535;old_locus_tag=BCEP4_1200002 NZ_CAJZAV010000025.1 Protein Homology CDS 1040 1939 . + 0 ID=cds-WP_060196616.1;Parent=gene-LDO49_RS04535;Dbxref=GenBank:WP_060196616.1;Name=WP_060196616.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488775.1;locus_tag=LDO49_RS04535;product=LysR family transcriptional regulator;protein_id=WP_060196616.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq pseudogene 1977 2132 . - . ID=gene-LDO49_RS04540;Name=LDO49_RS04540;end_range=2132,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS04540;old_locus_tag=BCEP4_1200003;partial=true;pseudo=true NZ_CAJZAV010000025.1 Protein Homology CDS 1977 2132 . - 0 ID=cds-LDO49_RS04540;Parent=gene-LDO49_RS04540;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2132,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009770166.1;locus_tag=LDO49_RS04540;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 2277 2672 . + . ID=gene-LDO49_RS04545;Name=LDO49_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04545;old_locus_tag=BCEP4_1200004 NZ_CAJZAV010000025.1 GeneMarkS-2+ CDS 2277 2672 . + 0 ID=cds-WP_059494552.1;Parent=gene-LDO49_RS04545;Dbxref=GenBank:WP_059494552.1;Name=WP_059494552.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS04545;product=hypothetical protein;protein_id=WP_059494552.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 2709 3029 . + . ID=gene-LDO49_RS04550;Name=LDO49_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04550;old_locus_tag=BCEP4_1200006 NZ_CAJZAV010000025.1 GeneMarkS-2+ CDS 2709 3029 . + 0 ID=cds-WP_059556255.1;Parent=gene-LDO49_RS04550;Dbxref=GenBank:WP_059556255.1;Name=WP_059556255.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS04550;product=hypothetical protein;protein_id=WP_059556255.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 3093 3854 . - . ID=gene-LDO49_RS04555;Name=LDO49_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04555;old_locus_tag=BCEP4_1200007 NZ_CAJZAV010000025.1 Protein Homology CDS 3093 3854 . - 0 ID=cds-WP_224051468.1;Parent=gene-LDO49_RS04555;Dbxref=GenBank:WP_224051468.1;Name=WP_224051468.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338697.1;locus_tag=LDO49_RS04555;product=isocitrate lyase/PEP mutase family protein;protein_id=WP_224051468.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 3851 4897 . - . ID=gene-LDO49_RS04560;Name=LDO49_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04560;old_locus_tag=BCEP4_1200008 NZ_CAJZAV010000025.1 Protein Homology CDS 3851 4897 . - 0 ID=cds-WP_224051469.1;Parent=gene-LDO49_RS04560;Dbxref=GenBank:WP_224051469.1;Name=WP_224051469.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF015400.6;locus_tag=LDO49_RS04560;product=saccharopine dehydrogenase family protein;protein_id=WP_224051469.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 5015 5626 . + . ID=gene-LDO49_RS04565;Name=LDO49_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04565;old_locus_tag=BCEP4_1200009 NZ_CAJZAV010000025.1 Protein Homology CDS 5015 5626 . + 0 ID=cds-WP_224051470.1;Parent=gene-LDO49_RS04565;Dbxref=GenBank:WP_224051470.1;Name=WP_224051470.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365363.1;locus_tag=LDO49_RS04565;product=TetR/AcrR family transcriptional regulator;protein_id=WP_224051470.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 5645 6112 . - . ID=gene-LDO49_RS04570;Name=LDO49_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04570;old_locus_tag=BCEP4_1200010 NZ_CAJZAV010000025.1 Protein Homology CDS 5645 6112 . - 0 ID=cds-WP_021158363.1;Parent=gene-LDO49_RS04570;Dbxref=GenBank:WP_021158363.1;Name=WP_021158363.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749655.1;locus_tag=LDO49_RS04570;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_021158363.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 6194 6562 . + . ID=gene-LDO49_RS04575;Name=LDO49_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04575;old_locus_tag=BCEP4_1200011 NZ_CAJZAV010000025.1 Protein Homology CDS 6194 6562 . + 0 ID=cds-WP_048020413.1;Parent=gene-LDO49_RS04575;Dbxref=GenBank:WP_048020413.1;Name=WP_048020413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356150.1;locus_tag=LDO49_RS04575;product=hypothetical protein;protein_id=WP_048020413.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 6657 7274 . + . ID=gene-LDO49_RS04580;Name=LDO49_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04580;old_locus_tag=BCEP4_1200012 NZ_CAJZAV010000025.1 Protein Homology CDS 6657 7274 . + 0 ID=cds-WP_021158365.1;Parent=gene-LDO49_RS04580;Dbxref=GenBank:WP_021158365.1;Name=WP_021158365.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900310.1;locus_tag=LDO49_RS04580;product=glutathione S-transferase family protein;protein_id=WP_021158365.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 7383 8105 . - . ID=gene-LDO49_RS04585;Name=LDO49_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04585;old_locus_tag=BCEP4_1200013 NZ_CAJZAV010000025.1 Protein Homology CDS 7383 8105 . - 0 ID=cds-WP_224051471.1;Parent=gene-LDO49_RS04585;Dbxref=GenBank:WP_224051471.1;Name=WP_224051471.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479728.1;locus_tag=LDO49_RS04585;product=HAD family hydrolase;protein_id=WP_224051471.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 8129 9100 . - . ID=gene-LDO49_RS04590;Name=LDO49_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04590;old_locus_tag=BCEP4_1200014 NZ_CAJZAV010000025.1 Protein Homology CDS 8129 9100 . - 0 ID=cds-WP_224051472.1;Parent=gene-LDO49_RS04590;Dbxref=GenBank:WP_224051472.1;Name=WP_224051472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694606.1;locus_tag=LDO49_RS04590;product=ornithine cyclodeaminase family protein;protein_id=WP_224051472.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 9210 10340 . - . ID=gene-LDO49_RS04595;Name=LDO49_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04595;old_locus_tag=BCEP4_1200015 NZ_CAJZAV010000025.1 Protein Homology CDS 9210 10340 . - 0 ID=cds-WP_224051473.1;Parent=gene-LDO49_RS04595;Dbxref=GenBank:WP_224051473.1;Name=WP_224051473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003263135.1;locus_tag=LDO49_RS04595;product=DSD1 family PLP-dependent enzyme;protein_id=WP_224051473.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 10486 11412 . - . ID=gene-LDO49_RS04600;Name=LDO49_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04600;old_locus_tag=BCEP4_1200016 NZ_CAJZAV010000025.1 Protein Homology CDS 10486 11412 . - 0 ID=cds-WP_124474886.1;Parent=gene-LDO49_RS04600;Dbxref=GenBank:WP_124474886.1;Name=WP_124474886.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493131.1;locus_tag=LDO49_RS04600;product=LysR family transcriptional regulator;protein_id=WP_124474886.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 11644 12498 . + . ID=gene-LDO49_RS04605;Name=LDO49_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04605;old_locus_tag=BCEP4_1200017 NZ_CAJZAV010000025.1 GeneMarkS-2+ CDS 11644 12498 . + 0 ID=cds-WP_060070968.1;Parent=gene-LDO49_RS04605;Dbxref=GenBank:WP_060070968.1;Name=WP_060070968.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS04605;product=hypothetical protein;protein_id=WP_060070968.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 12526 13440 . - . ID=gene-LDO49_RS04610;Name=LDO49_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04610;old_locus_tag=BCEP4_1200018 NZ_CAJZAV010000025.1 Protein Homology CDS 12526 13440 . - 0 ID=cds-WP_060070971.1;Parent=gene-LDO49_RS04610;Dbxref=GenBank:WP_060070971.1;Name=WP_060070971.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495679.1;locus_tag=LDO49_RS04610;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_060070971.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 13580 14020 . + . ID=gene-LDO49_RS04615;Name=LDO49_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04615;old_locus_tag=BCEP4_1200019 NZ_CAJZAV010000025.1 Protein Homology CDS 13580 14020 . + 0 ID=cds-WP_059556170.1;Parent=gene-LDO49_RS04615;Dbxref=GenBank:WP_059556170.1;Name=WP_059556170.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488781.1;locus_tag=LDO49_RS04615;product=Rrf2 family transcriptional regulator;protein_id=WP_059556170.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 14271 14861 . + . ID=gene-LDO49_RS04620;Name=LDO49_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04620;old_locus_tag=BCEP4_1200021 NZ_CAJZAV010000025.1 Protein Homology CDS 14271 14861 . + 0 ID=cds-WP_060070973.1;Parent=gene-LDO49_RS04620;Dbxref=GenBank:WP_060070973.1;Name=WP_060070973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493132.1;locus_tag=LDO49_RS04620;product=DUF2760 domain-containing protein;protein_id=WP_060070973.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 14858 16699 . + . ID=gene-LDO49_RS04625;Name=LDO49_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04625;old_locus_tag=BCEP4_1200020 NZ_CAJZAV010000025.1 Protein Homology CDS 14858 16699 . + 0 ID=cds-WP_060070976.1;Parent=gene-LDO49_RS04625;Dbxref=GenBank:WP_060070976.1;Name=WP_060070976.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694612.1;locus_tag=LDO49_RS04625;product=Hsp70 family protein;protein_id=WP_060070976.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 16705 19449 . + . ID=gene-LDO49_RS04630;Name=LDO49_RS04630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04630;old_locus_tag=BCEP4_1200022 NZ_CAJZAV010000025.1 Protein Homology CDS 16705 19449 . + 0 ID=cds-WP_060070979.1;Parent=gene-LDO49_RS04630;Dbxref=GenBank:WP_060070979.1;Name=WP_060070979.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356136.1;locus_tag=LDO49_RS04630;product=Hsp70 family protein;protein_id=WP_060070979.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 19580 20581 . - . ID=gene-LDO49_RS04635;Name=ctlX;gbkey=Gene;gene=ctlX;gene_biotype=protein_coding;locus_tag=LDO49_RS04635;old_locus_tag=BCEP4_1200023 NZ_CAJZAV010000025.1 Protein Homology CDS 19580 20581 . - 0 ID=cds-WP_060070982.1;Parent=gene-LDO49_RS04635;Dbxref=GenBank:WP_060070982.1;Name=WP_060070982.1;Ontology_term=GO:0019241;gbkey=CDS;gene=ctlX;go_process=L-citrulline catabolic process|0019241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495675.1;locus_tag=LDO49_RS04635;product=citrulline utilization hydrolase CtlX;protein_id=WP_060070982.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 20640 21719 . - . ID=gene-LDO49_RS04640;Name=LDO49_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04640;old_locus_tag=BCEP4_1200024 NZ_CAJZAV010000025.1 Protein Homology CDS 20640 21719 . - 0 ID=cds-WP_059494576.1;Parent=gene-LDO49_RS04640;Dbxref=GenBank:WP_059494576.1;Name=WP_059494576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015004654.1;locus_tag=LDO49_RS04640;product=ornithine cyclodeaminase;protein_id=WP_059494576.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 22017 22448 . + . ID=gene-LDO49_RS04645;Name=LDO49_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04645;old_locus_tag=BCEP4_1200025 NZ_CAJZAV010000025.1 Protein Homology CDS 22017 22448 . + 0 ID=cds-WP_042974028.1;Parent=gene-LDO49_RS04645;Dbxref=GenBank:WP_042974028.1;Name=WP_042974028.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094990.1;locus_tag=LDO49_RS04645;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_042974028.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 22508 23101 . - . ID=gene-LDO49_RS04650;Name=LDO49_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04650;old_locus_tag=BCEP4_1200026 NZ_CAJZAV010000025.1 Protein Homology CDS 22508 23101 . - 0 ID=cds-WP_060070985.1;Parent=gene-LDO49_RS04650;Dbxref=GenBank:WP_060070985.1;Name=WP_060070985.1;Note=This protein belongs to a clade of uncharacterized proteins related to peroxidases such as the alkylhydroperoxidase AhpD.;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491072.1;locus_tag=LDO49_RS04650;product=peroxidase-related enzyme;protein_id=WP_060070985.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 23098 23628 . - . ID=gene-LDO49_RS04655;Name=LDO49_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04655;old_locus_tag=BCEP4_1200027 NZ_CAJZAV010000025.1 Protein Homology CDS 23098 23628 . - 0 ID=cds-WP_060070988.1;Parent=gene-LDO49_RS04655;Dbxref=GenBank:WP_060070988.1;Name=WP_060070988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753965.1;locus_tag=LDO49_RS04655;product=CMD domain-containing protein;protein_id=WP_060070988.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 23673 25106 . - . ID=gene-LDO49_RS04660;Name=LDO49_RS04660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04660;old_locus_tag=BCEP4_1200028 NZ_CAJZAV010000025.1 Protein Homology CDS 23673 25106 . - 0 ID=cds-WP_224051474.1;Parent=gene-LDO49_RS04660;Dbxref=GenBank:WP_224051474.1;Name=WP_224051474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356130.1;locus_tag=LDO49_RS04660;product=flavin-containing monooxygenase;protein_id=WP_224051474.1;transl_table=11 NZ_CAJZAV010000025.1 RefSeq gene 25103 25624 . - . ID=gene-LDO49_RS04665;Name=LDO49_RS04665;end_range=25624,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04665;old_locus_tag=BCEP4_1200029;partial=true NZ_CAJZAV010000025.1 Protein Homology CDS 25103 25624 . - 0 ID=cds-WP_253074668.1;Parent=gene-LDO49_RS04665;Dbxref=GenBank:WP_253074668.1;Name=WP_253074668.1;end_range=25624,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495671.1;locus_tag=LDO49_RS04665;partial=true;product=LysR substrate-binding domain-containing protein;protein_id=WP_253074668.1;transl_table=11 ##sequence-region NZ_CAJZAV010000026.1 1 13111 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000026.1 RefSeq region 1 13111 . + . ID=NZ_CAJZAV010000026.1:1..13111;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_121 NZ_CAJZAV010000026.1 RefSeq gene 1 361 . - . ID=gene-LDO49_RS04670;Name=LDO49_RS04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04670;partial=true;start_range=.,1 NZ_CAJZAV010000026.1 Protein Homology CDS 1 361 . - 0 ID=cds-WP_290369766.1;Parent=gene-LDO49_RS04670;Dbxref=GenBank:WP_290369766.1;Name=WP_290369766.1;Ontology_term=GO:0004113,GO:0008664;gbkey=CDS;go_function=2'%2C3'-cyclic-nucleotide 3'-phosphodiesterase activity|0004113||IEA,RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752968.1;locus_tag=LDO49_RS04670;partial=true;product=2'-5' RNA ligase family protein;protein_id=WP_290369766.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000026.1 RefSeq gene 358 1848 . - . ID=gene-LDO49_RS04675;Name=LDO49_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04675;old_locus_tag=BCEP4_1210002 NZ_CAJZAV010000026.1 Protein Homology CDS 358 1848 . - 0 ID=cds-WP_048025754.1;Parent=gene-LDO49_RS04675;Dbxref=GenBank:WP_048025754.1;Name=WP_048025754.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400606.1;locus_tag=LDO49_RS04675;product=alanine/glycine:cation symporter family protein;protein_id=WP_048025754.1;transl_table=11 NZ_CAJZAV010000026.1 RefSeq gene 2814 3815 . + . ID=gene-LDO49_RS04680;Name=LDO49_RS04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04680;old_locus_tag=BCEP4_1210003 NZ_CAJZAV010000026.1 Protein Homology CDS 2814 3815 . + 0 ID=cds-WP_224051476.1;Parent=gene-LDO49_RS04680;Dbxref=GenBank:WP_224051476.1;Name=WP_224051476.1;Ontology_term=GO:0042742;gbkey=CDS;go_process=defense response to bacterium|0042742||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092908.1;locus_tag=LDO49_RS04680;product=lipid II-degrading bacteriocin;protein_id=WP_224051476.1;transl_table=11 NZ_CAJZAV010000026.1 RefSeq gene 3892 4290 . + . ID=gene-LDO49_RS04685;Name=LDO49_RS04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04685;old_locus_tag=BCEP4_1210004 NZ_CAJZAV010000026.1 Protein Homology CDS 3892 4290 . + 0 ID=cds-WP_060070238.1;Parent=gene-LDO49_RS04685;Dbxref=GenBank:WP_060070238.1;Name=WP_060070238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362917.1;locus_tag=LDO49_RS04685;product=hypothetical protein;protein_id=WP_060070238.1;transl_table=11 NZ_CAJZAV010000026.1 RefSeq gene 4350 5816 . - . ID=gene-LDO49_RS04690;Name=LDO49_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04690;old_locus_tag=BCEP4_1210005 NZ_CAJZAV010000026.1 Protein Homology CDS 4350 5816 . - 0 ID=cds-WP_021162703.1;Parent=gene-LDO49_RS04690;Dbxref=GenBank:WP_021162703.1;Name=WP_021162703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016346426.1;locus_tag=LDO49_RS04690;product=glutamate synthase subunit beta;protein_id=WP_021162703.1;transl_table=11 NZ_CAJZAV010000026.1 RefSeq gene 5902 10605 . - . ID=gene-LDO49_RS04695;Name=LDO49_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04695;old_locus_tag=BCEP4_1210006 NZ_CAJZAV010000026.1 Protein Homology CDS 5902 10605 . - 0 ID=cds-WP_224051477.1;Parent=gene-LDO49_RS04695;Dbxref=GenBank:WP_224051477.1;Name=WP_224051477.1;Ontology_term=GO:0006537,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=glutamate biosynthetic process|0006537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477150.1;locus_tag=LDO49_RS04695;product=glutamate synthase-related protein;protein_id=WP_224051477.1;transl_table=11 NZ_CAJZAV010000026.1 RefSeq gene 10894 11607 . - . ID=gene-LDO49_RS04700;Name=LDO49_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04700;old_locus_tag=BCEP4_1210007 NZ_CAJZAV010000026.1 Protein Homology CDS 10894 11607 . - 0 ID=cds-WP_006477151.1;Parent=gene-LDO49_RS04700;Dbxref=GenBank:WP_006477151.1;Name=WP_006477151.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898328.1;locus_tag=LDO49_RS04700;product=transposase;protein_id=WP_006477151.1;transl_table=11 NZ_CAJZAV010000026.1 RefSeq gene 11801 12532 . + . ID=gene-LDO49_RS04705;Name=LDO49_RS04705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04705;old_locus_tag=BCEP4_1210008 NZ_CAJZAV010000026.1 Protein Homology CDS 11801 12532 . + 0 ID=cds-WP_021162706.1;Parent=gene-LDO49_RS04705;Dbxref=GenBank:WP_021162706.1;Name=WP_021162706.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350702.1;locus_tag=LDO49_RS04705;product=OmpW/AlkL family protein;protein_id=WP_021162706.1;transl_table=11 NZ_CAJZAV010000026.1 RefSeq gene 12697 12972 . - . ID=gene-LDO49_RS04710;Name=LDO49_RS04710;end_range=12972,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04710;old_locus_tag=BCEP4_1210009;partial=true NZ_CAJZAV010000026.1 Protein Homology CDS 12697 12972 . - 0 ID=cds-WP_443797908.1;Parent=gene-LDO49_RS04710;Dbxref=GenBank:WP_443797908.1;Name=WP_443797908.1;Ontology_term=GO:0006629,GO:0008081;end_range=12972,.;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765390.1;locus_tag=LDO49_RS04710;partial=true;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_443797908.1;transl_table=11 NZ_CAJZAV010000026.1 RefSeq pseudogene 12983 13111 . - . ID=gene-LDO49_RS37790;Name=ugpQ;end_range=13111,.;gbkey=Gene;gene=ugpQ;gene_biotype=pseudogene;locus_tag=LDO49_RS37790;partial=true;pseudo=true;start_range=.,12983 NZ_CAJZAV010000026.1 Protein Homology CDS 12983 13111 . - 0 ID=cds-LDO49_RS37790;Parent=gene-LDO49_RS37790;Note=hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol%3B induced when cells are starved for inorganic phosphate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=13111,.;gbkey=CDS;gene=ugpQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883032.1;locus_tag=LDO49_RS37790;partial=true;product=glycerophosphodiester phosphodiesterase;pseudo=true;start_range=.,12983;transl_table=11 ##sequence-region NZ_CAJZAV010000027.1 1 49970 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000027.1 RefSeq region 1 49970 . + . ID=NZ_CAJZAV010000027.1:1..49970;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_122 NZ_CAJZAV010000027.1 RefSeq gene 1 778 . - . ID=gene-LDO49_RS04715;Name=LDO49_RS04715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04715;partial=true;start_range=.,1 NZ_CAJZAV010000027.1 Protein Homology CDS 1 778 . - 0 ID=cds-WP_224051478.1;Parent=gene-LDO49_RS04715;Dbxref=GenBank:WP_224051478.1;Name=WP_224051478.1;Ontology_term=GO:0006631,GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485256.1;locus_tag=LDO49_RS04715;partial=true;product=acetyl-CoA C-acyltransferase;protein_id=WP_224051478.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 1070 1654 . - . ID=gene-LDO49_RS04720;Name=phaP;gbkey=Gene;gene=phaP;gene_biotype=protein_coding;locus_tag=LDO49_RS04720;old_locus_tag=BCEP4_1220002 NZ_CAJZAV010000027.1 Protein Homology CDS 1070 1654 . - 0 ID=cds-WP_021162577.1;Parent=gene-LDO49_RS04720;Dbxref=GenBank:WP_021162577.1;Name=WP_021162577.1;Note=Members of this family are phasins (small proteins associated with inclusions such as PHA granules). Note that several different families of phasins have been named PhaP despite very little sequence similarity to each other.;gbkey=CDS;gene=phaP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694404.1;locus_tag=LDO49_RS04720;product=TIGR01841 family phasin;protein_id=WP_021162577.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 2160 2924 . - . ID=gene-LDO49_RS04725;Name=LDO49_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04725;old_locus_tag=BCEP4_1220003 NZ_CAJZAV010000027.1 Protein Homology CDS 2160 2924 . - 0 ID=cds-WP_060073192.1;Parent=gene-LDO49_RS04725;Dbxref=GenBank:WP_060073192.1;Name=WP_060073192.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334232.1;locus_tag=LDO49_RS04725;product=ParA family protein;protein_id=WP_060073192.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 3026 3649 . - . ID=gene-LDO49_RS04730;Name=LDO49_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04730;old_locus_tag=BCEP4_1220004 NZ_CAJZAV010000027.1 Protein Homology CDS 3026 3649 . - 0 ID=cds-WP_060073190.1;Parent=gene-LDO49_RS04730;Dbxref=GenBank:WP_060073190.1;Name=WP_060073190.1;Ontology_term=GO:0006284,GO:0003905;gbkey=CDS;go_function=alkylbase DNA N-glycosylase activity|0003905||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353209.1;locus_tag=LDO49_RS04730;product=DNA-3-methyladenine glycosylase;protein_id=WP_060073190.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 3636 4184 . - . ID=gene-LDO49_RS04735;Name=mug;gbkey=Gene;gene=mug;gene_biotype=protein_coding;locus_tag=LDO49_RS04735;old_locus_tag=BCEP4_1220005 NZ_CAJZAV010000027.1 Protein Homology CDS 3636 4184 . - 0 ID=cds-WP_060073188.1;Parent=gene-LDO49_RS04735;Dbxref=GenBank:WP_060073188.1;Name=WP_060073188.1;Ontology_term=GO:0006285,GO:0000700;gbkey=CDS;gene=mug;go_function=mismatch base pair DNA N-glycosylase activity|0000700||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896030.1;locus_tag=LDO49_RS04735;product=G/U mismatch-specific DNA glycosylase;protein_id=WP_060073188.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq pseudogene 4237 4564 . + . ID=gene-LDO49_RS04740;Name=LDO49_RS04740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS04740;old_locus_tag=BCEP4_1220006;partial=true;pseudo=true;start_range=.,4237 NZ_CAJZAV010000027.1 Protein Homology CDS 4237 4564 . + 0 ID=cds-LDO49_RS04740;Parent=gene-LDO49_RS04740;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558226.1;locus_tag=LDO49_RS04740;partial=true;product=IS5-like element ISCARN85 family transposase;pseudo=true;start_range=.,4237;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 4577 4858 . - . ID=gene-LDO49_RS04745;Name=LDO49_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04745;old_locus_tag=BCEP4_1220007 NZ_CAJZAV010000027.1 Protein Homology CDS 4577 4858 . - 0 ID=cds-WP_155634210.1;Parent=gene-LDO49_RS04745;Dbxref=GenBank:WP_155634210.1;Name=WP_155634210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212710.1;locus_tag=LDO49_RS04745;product=hypothetical protein;protein_id=WP_155634210.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 5487 6044 . - . ID=gene-LDO49_RS04750;Name=LDO49_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04750;old_locus_tag=BCEP4_1220010 NZ_CAJZAV010000027.1 Protein Homology CDS 5487 6044 . - 0 ID=cds-WP_021162583.1;Parent=gene-LDO49_RS04750;Dbxref=GenBank:WP_021162583.1;Name=WP_021162583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526067.1;locus_tag=LDO49_RS04750;product=single-stranded DNA-binding protein;protein_id=WP_021162583.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 6146 7333 . - . ID=gene-LDO49_RS04755;Name=LDO49_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04755;old_locus_tag=BCEP4_1220011 NZ_CAJZAV010000027.1 Protein Homology CDS 6146 7333 . - 0 ID=cds-WP_059489870.1;Parent=gene-LDO49_RS04755;Dbxref=GenBank:WP_059489870.1;Name=WP_059489870.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886043.1;locus_tag=LDO49_RS04755;product=MFS transporter;protein_id=WP_059489870.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 7598 10483 . + . ID=gene-LDO49_RS04760;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=LDO49_RS04760;old_locus_tag=BCEP4_1220012 NZ_CAJZAV010000027.1 Protein Homology CDS 7598 10483 . + 0 ID=cds-WP_021162587.1;Parent=gene-LDO49_RS04760;Dbxref=GenBank:WP_021162587.1;Name=WP_021162587.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090680.1;locus_tag=LDO49_RS04760;product=excinuclease ABC subunit UvrA;protein_id=WP_021162587.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 10737 11822 . + . ID=gene-LDO49_RS04765;Name=LDO49_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04765;old_locus_tag=BCEP4_1220013 NZ_CAJZAV010000027.1 Protein Homology CDS 10737 11822 . + 0 ID=cds-WP_060073182.1;Parent=gene-LDO49_RS04765;Dbxref=GenBank:WP_060073182.1;Name=WP_060073182.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917426.1;locus_tag=LDO49_RS04765;product=AI-2E family transporter;protein_id=WP_060073182.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 11909 12793 . - . ID=gene-LDO49_RS04770;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=LDO49_RS04770;old_locus_tag=BCEP4_1220014 NZ_CAJZAV010000027.1 Protein Homology CDS 11909 12793 . - 0 ID=cds-WP_021162590.1;Parent=gene-LDO49_RS04770;Dbxref=GenBank:WP_021162590.1;Name=WP_021162590.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522850.1;locus_tag=LDO49_RS04770;product=formyltetrahydrofolate deformylase;protein_id=WP_021162590.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 12867 13733 . - . ID=gene-LDO49_RS04775;Name=LDO49_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04775;old_locus_tag=BCEP4_1220015 NZ_CAJZAV010000027.1 Protein Homology CDS 12867 13733 . - 0 ID=cds-WP_060073180.1;Parent=gene-LDO49_RS04775;Dbxref=GenBank:WP_060073180.1;Name=WP_060073180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759036.1;locus_tag=LDO49_RS04775;product=NUDIX hydrolase;protein_id=WP_060073180.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 13739 14353 . - . ID=gene-LDO49_RS04780;Name=LDO49_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04780;old_locus_tag=BCEP4_1220016 NZ_CAJZAV010000027.1 Protein Homology CDS 13739 14353 . - 0 ID=cds-WP_021162592.1;Parent=gene-LDO49_RS04780;Dbxref=GenBank:WP_021162592.1;Name=WP_021162592.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896023.1;locus_tag=LDO49_RS04780;product=LysE family translocator;protein_id=WP_021162592.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 14395 14961 . - . ID=gene-LDO49_RS04785;Name=LDO49_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04785;old_locus_tag=BCEP4_1220017 NZ_CAJZAV010000027.1 Protein Homology CDS 14395 14961 . - 0 ID=cds-WP_011353218.1;Parent=gene-LDO49_RS04785;Dbxref=GenBank:WP_011353218.1;Name=WP_011353218.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212706.1;locus_tag=LDO49_RS04785;product=adenine phosphoribosyltransferase;protein_id=WP_011353218.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 15044 17050 . - . ID=gene-LDO49_RS04790;Name=LDO49_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04790;old_locus_tag=BCEP4_1220018 NZ_CAJZAV010000027.1 Protein Homology CDS 15044 17050 . - 0 ID=cds-WP_060073196.1;Parent=gene-LDO49_RS04790;Dbxref=GenBank:WP_060073196.1;Name=WP_060073196.1;Ontology_term=GO:0006812,GO:0055085,GO:1902600,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415479.1;locus_tag=LDO49_RS04790;product=monovalent cation:proton antiporter family protein;protein_id=WP_060073196.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 17177 18160 . + . ID=gene-LDO49_RS04795;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=LDO49_RS04795;old_locus_tag=BCEP4_1220019 NZ_CAJZAV010000027.1 Protein Homology CDS 17177 18160 . + 0 ID=cds-WP_021162595.1;Parent=gene-LDO49_RS04795;Dbxref=GenBank:WP_021162595.1;Name=WP_021162595.1;gbkey=CDS;gene=kdsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195206.1;locus_tag=LDO49_RS04795;product=arabinose 5-phosphate isomerase KdsD;protein_id=WP_021162595.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 18160 18696 . + . ID=gene-LDO49_RS04800;Name=LDO49_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04800;old_locus_tag=BCEP4_1220020 NZ_CAJZAV010000027.1 Protein Homology CDS 18160 18696 . + 0 ID=cds-WP_060073178.1;Parent=gene-LDO49_RS04800;Dbxref=GenBank:WP_060073178.1;Name=WP_060073178.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010113872.1;locus_tag=LDO49_RS04800;product=KdsC family phosphatase;protein_id=WP_060073178.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 18700 19314 . + . ID=gene-LDO49_RS04805;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=LDO49_RS04805;old_locus_tag=BCEP4_1220021 NZ_CAJZAV010000027.1 Protein Homology CDS 18700 19314 . + 0 ID=cds-WP_021162597.1;Parent=gene-LDO49_RS04805;Dbxref=GenBank:WP_021162597.1;Name=WP_021162597.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptC;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893044.1;locus_tag=LDO49_RS04805;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_021162597.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 19335 20000 . + . ID=gene-LDO49_RS04810;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=LDO49_RS04810;old_locus_tag=BCEP4_1220022 NZ_CAJZAV010000027.1 Protein Homology CDS 19335 20000 . + 0 ID=cds-WP_060073176.1;Parent=gene-LDO49_RS04810;Dbxref=GenBank:WP_060073176.1;Name=WP_060073176.1;Ontology_term=GO:0015920,GO:0001530,GO:0042597;gbkey=CDS;gene=lptA;go_component=periplasmic space|0042597||IEA;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752624.1;locus_tag=LDO49_RS04810;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=WP_060073176.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 19997 20773 . + . ID=gene-LDO49_RS04815;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=LDO49_RS04815;old_locus_tag=BCEP4_1220023 NZ_CAJZAV010000027.1 Protein Homology CDS 19997 20773 . + 0 ID=cds-WP_006477788.1;Parent=gene-LDO49_RS04815;Dbxref=GenBank:WP_006477788.1;Name=WP_006477788.1;Ontology_term=GO:0015920,GO:0015221,GO:0042626,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886055.1;locus_tag=LDO49_RS04815;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_006477788.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 20946 22451 . + . ID=gene-LDO49_RS04820;Name=LDO49_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04820;old_locus_tag=BCEP4_1220024 NZ_CAJZAV010000027.1 Protein Homology CDS 20946 22451 . + 0 ID=cds-WP_042977154.1;Parent=gene-LDO49_RS04820;Dbxref=GenBank:WP_042977154.1;Name=WP_042977154.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195216.1;locus_tag=LDO49_RS04820;product=RNA polymerase factor sigma-54;protein_id=WP_042977154.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 22610 22969 . + . ID=gene-LDO49_RS04825;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=LDO49_RS04825;old_locus_tag=BCEP4_1220025 NZ_CAJZAV010000027.1 Protein Homology CDS 22610 22969 . + 0 ID=cds-WP_006477786.1;Parent=gene-LDO49_RS04825;Dbxref=GenBank:WP_006477786.1;Name=WP_006477786.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195219.1;locus_tag=LDO49_RS04825;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_006477786.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 23139 23678 . + . ID=gene-LDO49_RS04830;Name=LDO49_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04830;old_locus_tag=BCEP4_1220027 NZ_CAJZAV010000027.1 Protein Homology CDS 23139 23678 . + 0 ID=cds-WP_034195946.1;Parent=gene-LDO49_RS04830;Dbxref=GenBank:WP_034195946.1;Name=WP_034195946.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353226.1;locus_tag=LDO49_RS04830;product=PTS sugar transporter subunit IIA;protein_id=WP_034195946.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 23810 24778 . + . ID=gene-LDO49_RS04835;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=LDO49_RS04835;old_locus_tag=BCEP4_1220028 NZ_CAJZAV010000027.1 Protein Homology CDS 23810 24778 . + 0 ID=cds-WP_011353227.1;Parent=gene-LDO49_RS04835;Dbxref=GenBank:WP_011353227.1;Name=WP_011353227.1;Ontology_term=GO:0000160,GO:0006109,GO:0000155,GO:0005524;gbkey=CDS;gene=hprK;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of carbohydrate metabolic process|0006109||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877041.1;locus_tag=LDO49_RS04835;product=HPr(Ser) kinase/phosphatase;protein_id=WP_011353227.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 24854 25762 . + . ID=gene-LDO49_RS04840;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=LDO49_RS04840;old_locus_tag=BCEP4_1220029 NZ_CAJZAV010000027.1 Protein Homology CDS 24854 25762 . + 0 ID=cds-WP_021162602.1;Parent=gene-LDO49_RS04840;Dbxref=GenBank:WP_021162602.1;Name=WP_021162602.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763369.1;locus_tag=LDO49_RS04840;product=RNase adapter RapZ;protein_id=WP_021162602.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 25790 26425 . + . ID=gene-LDO49_RS04845;Name=LDO49_RS04845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04845;old_locus_tag=BCEP4_1220030 NZ_CAJZAV010000027.1 Protein Homology CDS 25790 26425 . + 0 ID=cds-WP_021162603.1;Parent=gene-LDO49_RS04845;Dbxref=GenBank:WP_021162603.1;Name=WP_021162603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600699.1;locus_tag=LDO49_RS04845;product=LON peptidase substrate-binding domain-containing protein;protein_id=WP_021162603.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 26533 27639 . - . ID=gene-LDO49_RS04850;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=LDO49_RS04850;old_locus_tag=BCEP4_1220031 NZ_CAJZAV010000027.1 Protein Homology CDS 26533 27639 . - 0 ID=cds-WP_027789101.1;Parent=gene-LDO49_RS04850;Dbxref=GenBank:WP_027789101.1;Name=WP_027789101.1;Ontology_term=GO:0006284,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009972864.1;locus_tag=LDO49_RS04850;product=A/G-specific adenine glycosylase;protein_id=WP_027789101.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 27678 28505 . - . ID=gene-LDO49_RS04855;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=LDO49_RS04855;old_locus_tag=BCEP4_1220032 NZ_CAJZAV010000027.1 Protein Homology CDS 27678 28505 . - 0 ID=cds-WP_042977157.1;Parent=gene-LDO49_RS04855;Dbxref=GenBank:WP_042977157.1;Name=WP_042977157.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012431652.1;locus_tag=LDO49_RS04855;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_042977157.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 28592 30415 . + . ID=gene-LDO49_RS04860;Name=LDO49_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04860;old_locus_tag=BCEP4_1220033 NZ_CAJZAV010000027.1 Protein Homology CDS 28592 30415 . + 0 ID=cds-WP_048025673.1;Parent=gene-LDO49_RS04860;Dbxref=GenBank:WP_048025673.1;Name=WP_048025673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415510.1;locus_tag=LDO49_RS04860;product=tetratricopeptide repeat protein;protein_id=WP_048025673.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 30415 31035 . + . ID=gene-LDO49_RS04865;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=LDO49_RS04865;old_locus_tag=BCEP4_1220034 NZ_CAJZAV010000027.1 Protein Homology CDS 30415 31035 . + 0 ID=cds-WP_021163054.1;Parent=gene-LDO49_RS04865;Dbxref=GenBank:WP_021163054.1;Name=WP_021163054.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415468.1;locus_tag=LDO49_RS04865;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_021163054.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 31061 31942 . + . ID=gene-LDO49_RS04870;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=LDO49_RS04870;old_locus_tag=BCEP4_1220035 NZ_CAJZAV010000027.1 Protein Homology CDS 31061 31942 . + 0 ID=cds-WP_224051479.1;Parent=gene-LDO49_RS04870;Dbxref=GenBank:WP_224051479.1;Name=WP_224051479.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600162.1;locus_tag=LDO49_RS04870;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_224051479.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 31998 32074 . + . ID=gene-LDO49_RS04875;Name=LDO49_RS04875;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS04875;old_locus_tag=BCEP4_TRNA23 NZ_CAJZAV010000027.1 tRNAscan-SE tRNA 31998 32074 . + . ID=rna-LDO49_RS04875;Parent=gene-LDO49_RS04875;anticodon=(pos:32032..32034);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS04875;product=tRNA-Gln NZ_CAJZAV010000027.1 tRNAscan-SE exon 31998 32074 . + . ID=exon-LDO49_RS04875-1;Parent=rna-LDO49_RS04875;anticodon=(pos:32032..32034);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS04875;product=tRNA-Gln NZ_CAJZAV010000027.1 RefSeq gene 32119 33081 . + . ID=gene-LDO49_RS04880;Name=LDO49_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04880;old_locus_tag=BCEP4_1220036 NZ_CAJZAV010000027.1 Protein Homology CDS 32119 33081 . + 0 ID=cds-WP_027789096.1;Parent=gene-LDO49_RS04880;Dbxref=GenBank:WP_027789096.1;Name=WP_027789096.1;Ontology_term=GO:0006015,GO:0009156,GO:0009165,GO:0016310,GO:0000287,GO:0004749,GO:0005524,GO:0016301,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,ribose phosphate diphosphokinase activity|0004749||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA,ribonucleoside monophosphate biosynthetic process|0009156||IEA,nucleotide biosynthetic process|0009165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753281.1;locus_tag=LDO49_RS04880;product=ribose-phosphate pyrophosphokinase;protein_id=WP_027789096.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 33243 33848 . + . ID=gene-LDO49_RS04885;Name=LDO49_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04885;old_locus_tag=BCEP4_1220037 NZ_CAJZAV010000027.1 Protein Homology CDS 33243 33848 . + 0 ID=cds-WP_021163051.1;Parent=gene-LDO49_RS04885;Dbxref=GenBank:WP_021163051.1;Name=WP_021163051.1;Ontology_term=GO:0006412,GO:0003735,GO:0008097;gbkey=CDS;go_function=structural constituent of ribosome|0003735||IEA,5S rRNA binding|0008097||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353236.1;locus_tag=LDO49_RS04885;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_021163051.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 33969 34568 . + . ID=gene-LDO49_RS04890;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=LDO49_RS04890;old_locus_tag=BCEP4_1220039 NZ_CAJZAV010000027.1 Protein Homology CDS 33969 34568 . + 0 ID=cds-WP_021163050.1;Parent=gene-LDO49_RS04890;Dbxref=GenBank:WP_021163050.1;Name=WP_021163050.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753283.1;locus_tag=LDO49_RS04890;product=aminoacyl-tRNA hydrolase;protein_id=WP_021163050.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 34682 35749 . + . ID=gene-LDO49_RS04895;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=LDO49_RS04895;old_locus_tag=BCEP4_1220040 NZ_CAJZAV010000027.1 Protein Homology CDS 34682 35749 . + 0 ID=cds-WP_224051480.1;Parent=gene-LDO49_RS04895;Dbxref=GenBank:WP_224051480.1;Name=WP_224051480.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353237.1;locus_tag=LDO49_RS04895;product=histidinol-phosphate transaminase;protein_id=WP_224051480.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 35834 36100 . - . ID=gene-LDO49_RS04900;Name=LDO49_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04900;old_locus_tag=BCEP4_1220041 NZ_CAJZAV010000027.1 Protein Homology CDS 35834 36100 . - 0 ID=cds-WP_059651367.1;Parent=gene-LDO49_RS04900;Dbxref=GenBank:WP_059651367.1;Name=WP_059651367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353238.1;locus_tag=LDO49_RS04900;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_059651367.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 36160 36657 . - . ID=gene-LDO49_RS04905;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=LDO49_RS04905;old_locus_tag=BCEP4_1220042 NZ_CAJZAV010000027.1 Protein Homology CDS 36160 36657 . - 0 ID=cds-WP_021163047.1;Parent=gene-LDO49_RS04905;Dbxref=GenBank:WP_021163047.1;Name=WP_021163047.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195249.1;locus_tag=LDO49_RS04905;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_021163047.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 36769 37383 . - . ID=gene-LDO49_RS04910;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=LDO49_RS04910;old_locus_tag=BCEP4_1220043 NZ_CAJZAV010000027.1 Protein Homology CDS 36769 37383 . - 0 ID=cds-WP_059498602.1;Parent=gene-LDO49_RS04910;Dbxref=GenBank:WP_059498602.1;Name=WP_059498602.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601291.1;locus_tag=LDO49_RS04910;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_059498602.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 37600 38754 . + . ID=gene-LDO49_RS04915;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=LDO49_RS04915;old_locus_tag=BCEP4_1220044 NZ_CAJZAV010000027.1 Protein Homology CDS 37600 38754 . + 0 ID=cds-WP_060073171.1;Parent=gene-LDO49_RS04915;Dbxref=GenBank:WP_060073171.1;Name=WP_060073171.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416170.1;locus_tag=LDO49_RS04915;product=signal recognition particle-docking protein FtsY;protein_id=WP_060073171.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 38838 39482 . - . ID=gene-LDO49_RS04920;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=LDO49_RS04920;old_locus_tag=BCEP4_1220045 NZ_CAJZAV010000027.1 Protein Homology CDS 38838 39482 . - 0 ID=cds-WP_059498604.1;Parent=gene-LDO49_RS04920;Dbxref=GenBank:WP_059498604.1;Name=WP_059498604.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,L-tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009902749.1;locus_tag=LDO49_RS04920;product=maleylacetoacetate isomerase;protein_id=WP_059498604.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 39676 40650 . + . ID=gene-LDO49_RS04925;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=LDO49_RS04925;old_locus_tag=BCEP4_1220046 NZ_CAJZAV010000027.1 Protein Homology CDS 39676 40650 . + 0 ID=cds-WP_060073169.1;Parent=gene-LDO49_RS04925;Dbxref=GenBank:WP_060073169.1;Name=WP_060073169.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329250.1;locus_tag=LDO49_RS04925;product=DNA-binding protein YbiB;protein_id=WP_060073169.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 41031 42677 . + . ID=gene-LDO49_RS04930;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=LDO49_RS04930;old_locus_tag=BCEP4_1220047 NZ_CAJZAV010000027.1 Protein Homology CDS 41031 42677 . + 0 ID=cds-WP_060073167.1;Parent=gene-LDO49_RS04930;Dbxref=GenBank:WP_060073167.1;Name=WP_060073167.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254946.1;locus_tag=LDO49_RS04930;product=2-isopropylmalate synthase;protein_id=WP_060073167.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 42818 43201 . - . ID=gene-LDO49_RS04935;Name=LDO49_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04935;old_locus_tag=BCEP4_1220048 NZ_CAJZAV010000027.1 Protein Homology CDS 42818 43201 . - 0 ID=cds-WP_027789089.1;Parent=gene-LDO49_RS04935;Dbxref=GenBank:WP_027789089.1;Name=WP_027789089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723676.1;locus_tag=LDO49_RS04935;product=nuclear transport factor 2 family protein;protein_id=WP_027789089.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 43247 43816 . - . ID=gene-LDO49_RS04940;Name=LDO49_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04940;old_locus_tag=BCEP4_1220049 NZ_CAJZAV010000027.1 Protein Homology CDS 43247 43816 . - 0 ID=cds-WP_021163039.1;Parent=gene-LDO49_RS04940;Dbxref=GenBank:WP_021163039.1;Name=WP_021163039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483740.1;locus_tag=LDO49_RS04940;product=acyloxyacyl hydrolase;protein_id=WP_021163039.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 44175 45110 . + . ID=gene-LDO49_RS04945;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=LDO49_RS04945;old_locus_tag=BCEP4_1220051 NZ_CAJZAV010000027.1 Protein Homology CDS 44175 45110 . + 0 ID=cds-WP_021163037.1;Parent=gene-LDO49_RS04945;Dbxref=GenBank:WP_021163037.1;Name=WP_021163037.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893111.1;locus_tag=LDO49_RS04945;product=RNA polymerase sigma factor RpoH;protein_id=WP_021163037.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 45486 45770 . + . ID=gene-LDO49_RS04950;Name=cydP;gbkey=Gene;gene=cydP;gene_biotype=protein_coding;locus_tag=LDO49_RS04950;old_locus_tag=BCEP4_1220052 NZ_CAJZAV010000027.1 Protein Homology CDS 45486 45770 . + 0 ID=cds-WP_027789087.1;Parent=gene-LDO49_RS04950;Dbxref=GenBank:WP_027789087.1;Name=WP_027789087.1;gbkey=CDS;gene=cydP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101551.1;locus_tag=LDO49_RS04950;product=cytochrome oxidase putative small subunit CydP;protein_id=WP_027789087.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 45760 47340 . + . ID=gene-LDO49_RS04955;Name=LDO49_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04955;old_locus_tag=BCEP4_1220053 NZ_CAJZAV010000027.1 Protein Homology CDS 45760 47340 . + 0 ID=cds-WP_021163035.1;Parent=gene-LDO49_RS04955;Dbxref=GenBank:WP_021163035.1;Name=WP_021163035.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212679.1;locus_tag=LDO49_RS04955;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_021163035.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 47372 48508 . + . ID=gene-LDO49_RS04960;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=LDO49_RS04960;old_locus_tag=BCEP4_1220054 NZ_CAJZAV010000027.1 Protein Homology CDS 47372 48508 . + 0 ID=cds-WP_059498605.1;Parent=gene-LDO49_RS04960;Dbxref=GenBank:WP_059498605.1;Name=WP_059498605.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101549.1;locus_tag=LDO49_RS04960;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_059498605.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 48564 48680 . + . ID=gene-LDO49_RS04965;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;gene_synonym=ybgT;locus_tag=LDO49_RS04965;old_locus_tag=BCEP4_1220055 NZ_CAJZAV010000027.1 Protein Homology CDS 48564 48680 . + 0 ID=cds-WP_021163033.1;Parent=gene-LDO49_RS04965;Dbxref=GenBank:WP_021163033.1;Name=WP_021163033.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763346.1;locus_tag=LDO49_RS04965;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_021163033.1;transl_table=11 NZ_CAJZAV010000027.1 RefSeq gene 49371 49970 . + . ID=gene-LDO49_RS04970;Name=LDO49_RS04970;end_range=49970,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04970;partial=true NZ_CAJZAV010000027.1 Protein Homology CDS 49371 49970 . + 0 ID=cds-WP_443797909.1;Parent=gene-LDO49_RS04970;Dbxref=GenBank:WP_443797909.1;Name=WP_443797909.1;end_range=49970,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353252.1;locus_tag=LDO49_RS04970;partial=true;product=carbohydate-binding domain-containing protein;protein_id=WP_443797909.1;transl_table=11 ##sequence-region NZ_CAJZAV010000028.1 1 62892 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000028.1 RefSeq region 1 62892 . + . ID=NZ_CAJZAV010000028.1:1..62892;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_123 NZ_CAJZAV010000028.1 RefSeq gene 1 4630 . - . ID=gene-LDO49_RS04975;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=LDO49_RS04975;partial=true;start_range=.,1 NZ_CAJZAV010000028.1 Protein Homology CDS 1 4630 . - 0 ID=cds-WP_224051482.1;Parent=gene-LDO49_RS04975;Dbxref=GenBank:WP_224051482.1;Name=WP_224051482.1;Ontology_term=GO:0006289,GO:0003677,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrA;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336984.1;locus_tag=LDO49_RS04975;partial=true;product=excinuclease ABC subunit UvrA;protein_id=WP_224051482.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 5650 7488 . + . ID=gene-LDO49_RS04980;Name=LDO49_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04980;old_locus_tag=BCEP4_1230003 NZ_CAJZAV010000028.1 Protein Homology CDS 5650 7488 . + 0 ID=cds-WP_060148188.1;Parent=gene-LDO49_RS04980;Dbxref=GenBank:WP_060148188.1;Name=WP_060148188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733972.1;locus_tag=LDO49_RS04980;product=DUF3857 domain-containing transglutaminase family protein;protein_id=WP_060148188.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 7479 8915 . - . ID=gene-LDO49_RS04985;Name=LDO49_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04985;old_locus_tag=BCEP4_1230004 NZ_CAJZAV010000028.1 Protein Homology CDS 7479 8915 . - 0 ID=cds-WP_060148065.1;Parent=gene-LDO49_RS04985;Dbxref=GenBank:WP_060148065.1;Name=WP_060148065.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213634.1;locus_tag=LDO49_RS04985;product=TolC family protein;protein_id=WP_060148065.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 8912 11113 . - . ID=gene-LDO49_RS04990;Name=LDO49_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04990;old_locus_tag=BCEP4_1230005 NZ_CAJZAV010000028.1 Protein Homology CDS 8912 11113 . - 0 ID=cds-WP_253074669.1;Parent=gene-LDO49_RS04990;Dbxref=GenBank:WP_253074669.1;Name=WP_253074669.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213635.1;locus_tag=LDO49_RS04990;product=peptidase domain-containing ABC transporter;protein_id=WP_253074669.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 11129 12403 . - . ID=gene-LDO49_RS04995;Name=LDO49_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS04995;old_locus_tag=BCEP4_1230006 NZ_CAJZAV010000028.1 Protein Homology CDS 11129 12403 . - 0 ID=cds-WP_060148061.1;Parent=gene-LDO49_RS04995;Dbxref=GenBank:WP_060148061.1;Name=WP_060148061.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403004.1;locus_tag=LDO49_RS04995;product=HlyD family secretion protein;protein_id=WP_060148061.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 12523 14319 . - . ID=gene-LDO49_RS05000;Name=LDO49_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05000;old_locus_tag=BCEP4_1230007 NZ_CAJZAV010000028.1 GeneMarkS-2+ CDS 12523 14319 . - 0 ID=cds-WP_124475660.1;Parent=gene-LDO49_RS05000;Dbxref=GenBank:WP_124475660.1;Name=WP_124475660.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS05000;product=hypothetical protein;protein_id=WP_124475660.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 14333 14776 . - . ID=gene-LDO49_RS05005;Name=LDO49_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05005;old_locus_tag=BCEP4_1230008 NZ_CAJZAV010000028.1 Protein Homology CDS 14333 14776 . - 0 ID=cds-WP_081079513.1;Parent=gene-LDO49_RS05005;Dbxref=GenBank:WP_081079513.1;Name=WP_081079513.1;Ontology_term=GO:0009404,GO:0016746,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=acyltransferase activity|0016746||IEA;go_process=toxin metabolic process|0009404||IEA;inference=COORDINATES: protein motif:HMM:NF014813.6;locus_tag=LDO49_RS05005;product=toxin-activating lysine-acyltransferase;protein_id=WP_081079513.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 16322 16705 . + . ID=gene-LDO49_RS05010;Name=LDO49_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05010;old_locus_tag=BCEP4_1230012 NZ_CAJZAV010000028.1 Protein Homology CDS 16322 16705 . + 0 ID=cds-WP_060147558.1;Parent=gene-LDO49_RS05010;Dbxref=GenBank:WP_060147558.1;Name=WP_060147558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403790.1;locus_tag=LDO49_RS05010;product=hypothetical protein;protein_id=WP_060147558.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 16816 17142 . - . ID=gene-LDO49_RS05015;Name=LDO49_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05015;old_locus_tag=BCEP4_1230013 NZ_CAJZAV010000028.1 Protein Homology CDS 16816 17142 . - 0 ID=cds-WP_124627424.1;Parent=gene-LDO49_RS05015;Dbxref=GenBank:WP_124627424.1;Name=WP_124627424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661087.1;locus_tag=LDO49_RS05015;product=high-potential iron-sulfur protein;protein_id=WP_124627424.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 17283 17624 . - . ID=gene-LDO49_RS05020;Name=LDO49_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05020;old_locus_tag=BCEP4_1230014 NZ_CAJZAV010000028.1 Protein Homology CDS 17283 17624 . - 0 ID=cds-WP_060147560.1;Parent=gene-LDO49_RS05020;Dbxref=GenBank:WP_060147560.1;Name=WP_060147560.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350045.1;locus_tag=LDO49_RS05020;product=cytochrome C oxidase subunit IV family protein;protein_id=WP_060147560.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 17633 18367 . - . ID=gene-LDO49_RS05025;Name=LDO49_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05025;old_locus_tag=BCEP4_1230015 NZ_CAJZAV010000028.1 Protein Homology CDS 17633 18367 . - 0 ID=cds-WP_060147561.1;Parent=gene-LDO49_RS05025;Dbxref=GenBank:WP_060147561.1;Name=WP_060147561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003261352.1;locus_tag=LDO49_RS05025;product=heme-copper oxidase subunit III family protein;protein_id=WP_060147561.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 18364 18975 . - . ID=gene-LDO49_RS05030;Name=LDO49_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05030;old_locus_tag=BCEP4_1230016 NZ_CAJZAV010000028.1 Protein Homology CDS 18364 18975 . - 0 ID=cds-WP_060147562.1;Parent=gene-LDO49_RS05030;Dbxref=GenBank:WP_060147562.1;Name=WP_060147562.1;Ontology_term=GO:0004129,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334946.1;locus_tag=LDO49_RS05030;product=cytochrome c oxidase subunit 3;protein_id=WP_060147562.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 18972 20726 . - . ID=gene-LDO49_RS05035;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=LDO49_RS05035;old_locus_tag=BCEP4_1230017 NZ_CAJZAV010000028.1 Protein Homology CDS 18972 20726 . - 0 ID=cds-WP_104766107.1;Parent=gene-LDO49_RS05035;Dbxref=GenBank:WP_104766107.1;Name=WP_104766107.1;Ontology_term=GO:0015990,GO:0004129;gbkey=CDS;gene=ctaD;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661084.1;locus_tag=LDO49_RS05035;product=cytochrome c oxidase subunit I;protein_id=WP_104766107.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 20740 21891 . - . ID=gene-LDO49_RS05040;Name=LDO49_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05040;old_locus_tag=BCEP4_1230018 NZ_CAJZAV010000028.1 Protein Homology CDS 20740 21891 . - 0 ID=cds-WP_048027366.1;Parent=gene-LDO49_RS05040;Dbxref=GenBank:WP_048027366.1;Name=WP_048027366.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013089051.1;locus_tag=LDO49_RS05040;product=c-type cytochrome;protein_id=WP_048027366.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 21996 22511 . - . ID=gene-LDO49_RS05045;Name=LDO49_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05045;old_locus_tag=BCEP4_1230019 NZ_CAJZAV010000028.1 Protein Homology CDS 21996 22511 . - 0 ID=cds-WP_224051484.1;Parent=gene-LDO49_RS05045;Dbxref=GenBank:WP_224051484.1;Name=WP_224051484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350050.1;locus_tag=LDO49_RS05045;product=hypothetical protein;protein_id=WP_224051484.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 22709 23218 . - . ID=gene-LDO49_RS05050;Name=LDO49_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05050;old_locus_tag=BCEP4_1230020 NZ_CAJZAV010000028.1 Protein Homology CDS 22709 23218 . - 0 ID=cds-WP_224051485.1;Parent=gene-LDO49_RS05050;Dbxref=GenBank:WP_224051485.1;Name=WP_224051485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018422140.1;locus_tag=LDO49_RS05050;product=DUF1269 domain-containing protein;protein_id=WP_224051485.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 23338 23553 . - . ID=gene-LDO49_RS05055;Name=LDO49_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05055;old_locus_tag=BCEP4_1230021 NZ_CAJZAV010000028.1 Protein Homology CDS 23338 23553 . - 0 ID=cds-WP_027792801.1;Parent=gene-LDO49_RS05055;Dbxref=GenBank:WP_027792801.1;Name=WP_027792801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003262721.1;locus_tag=LDO49_RS05055;product=DUF3820 family protein;protein_id=WP_027792801.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 23718 23906 . + . ID=gene-LDO49_RS05060;Name=LDO49_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05060;old_locus_tag=BCEP4_1230022 NZ_CAJZAV010000028.1 Protein Homology CDS 23718 23906 . + 0 ID=cds-WP_021156550.1;Parent=gene-LDO49_RS05060;Dbxref=GenBank:WP_021156550.1;Name=WP_021156550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372277.1;locus_tag=LDO49_RS05060;product=hypothetical protein;protein_id=WP_021156550.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 24093 25553 . - . ID=gene-LDO49_RS05065;Name=LDO49_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05065;old_locus_tag=BCEP4_1230023 NZ_CAJZAV010000028.1 Protein Homology CDS 24093 25553 . - 0 ID=cds-WP_224051487.1;Parent=gene-LDO49_RS05065;Dbxref=GenBank:WP_224051487.1;Name=WP_224051487.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012404872.1;locus_tag=LDO49_RS05065;product=aspartate/glutamate racemase family protein;protein_id=WP_224051487.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 25550 26824 . - . ID=gene-LDO49_RS05070;Name=LDO49_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05070;old_locus_tag=BCEP4_1230024 NZ_CAJZAV010000028.1 Protein Homology CDS 25550 26824 . - 0 ID=cds-WP_059492988.1;Parent=gene-LDO49_RS05070;Dbxref=GenBank:WP_059492988.1;Name=WP_059492988.1;Ontology_term=GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007739968.1;locus_tag=LDO49_RS05070;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_059492988.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 26989 27903 . - . ID=gene-LDO49_RS05075;Name=LDO49_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05075;old_locus_tag=BCEP4_1230025 NZ_CAJZAV010000028.1 Protein Homology CDS 26989 27903 . - 0 ID=cds-WP_059492872.1;Parent=gene-LDO49_RS05075;Dbxref=GenBank:WP_059492872.1;Name=WP_059492872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372285.1;locus_tag=LDO49_RS05075;product=LysR substrate-binding domain-containing protein;protein_id=WP_059492872.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 28258 28920 . - . ID=gene-LDO49_RS05080;Name=LDO49_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05080;old_locus_tag=BCEP4_1230026 NZ_CAJZAV010000028.1 Protein Homology CDS 28258 28920 . - 0 ID=cds-WP_060156983.1;Parent=gene-LDO49_RS05080;Dbxref=GenBank:WP_060156983.1;Name=WP_060156983.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756520.1;locus_tag=LDO49_RS05080;product=OmpA family protein;protein_id=WP_060156983.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 29048 31386 . - . ID=gene-LDO49_RS37795;Name=LDO49_RS37795;end_range=31386,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37795;old_locus_tag=BCEP4_1230027;partial=true NZ_CAJZAV010000028.1 Protein Homology CDS 29048 31386 . - 2 ID=cds-WP_443797910.1;Parent=gene-LDO49_RS37795;Dbxref=GenBank:WP_443797910.1;Name=WP_443797910.1;Ontology_term=GO:0007155,GO:0015031;end_range=31386,.;gbkey=CDS;go_process=cell adhesion|0007155||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336988.1;locus_tag=LDO49_RS37795;partial=true;product=YadA family autotransporter adhesin;protein_id=WP_443797910.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 31397 33562 . - . ID=gene-LDO49_RS37800;Name=LDO49_RS37800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37800;old_locus_tag=BCEP4_1230029;partial=true;start_range=.,31397 NZ_CAJZAV010000028.1 Protein Homology CDS 31397 33562 . - 0 ID=cds-WP_443797911.1;Parent=gene-LDO49_RS37800;Dbxref=GenBank:WP_443797911.1;Name=WP_443797911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485575.1;locus_tag=LDO49_RS37800;partial=true;product=ESPR-type extended signal peptide-containing protein;protein_id=WP_443797911.1;start_range=.,31397;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 34999 35832 . + . ID=gene-LDO49_RS05090;Name=LDO49_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05090;old_locus_tag=BCEP4_1230033 NZ_CAJZAV010000028.1 Protein Homology CDS 34999 35832 . + 0 ID=cds-WP_021156543.1;Parent=gene-LDO49_RS05090;Dbxref=GenBank:WP_021156543.1;Name=WP_021156543.1;Ontology_term=GO:0000160,GO:0006355,GO:0007165,GO:0000156,GO:0003677,GO:0003700;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350064.1;locus_tag=LDO49_RS05090;product=response regulator transcription factor;protein_id=WP_021156543.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 35825 38173 . + . ID=gene-LDO49_RS05095;Name=LDO49_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05095;old_locus_tag=BCEP4_1230034 NZ_CAJZAV010000028.1 Protein Homology CDS 35825 38173 . + 0 ID=cds-WP_224051488.1;Parent=gene-LDO49_RS05095;Dbxref=GenBank:WP_224051488.1;Name=WP_224051488.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336989.1;locus_tag=LDO49_RS05095;product=sensor histidine kinase;protein_id=WP_224051488.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 38205 38360 . - . ID=gene-LDO49_RS05100;Name=LDO49_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05100;old_locus_tag=BCEP4_1230036 NZ_CAJZAV010000028.1 GeneMarkS-2+ CDS 38205 38360 . - 0 ID=cds-WP_155649075.1;Parent=gene-LDO49_RS05100;Dbxref=GenBank:WP_155649075.1;Name=WP_155649075.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS05100;product=hypothetical protein;protein_id=WP_155649075.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 38451 39971 . + . ID=gene-LDO49_RS05105;Name=LDO49_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05105;old_locus_tag=BCEP4_1230035 NZ_CAJZAV010000028.1 Protein Homology CDS 38451 39971 . + 0 ID=cds-WP_060147570.1;Parent=gene-LDO49_RS05105;Dbxref=GenBank:WP_060147570.1;Name=WP_060147570.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749692.1;locus_tag=LDO49_RS05105;product=sensor domain-containing diguanylate cyclase;protein_id=WP_060147570.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 40308 42266 . + . ID=gene-LDO49_RS05110;Name=LDO49_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05110;old_locus_tag=BCEP4_1230037 NZ_CAJZAV010000028.1 Protein Homology CDS 40308 42266 . + 0 ID=cds-WP_224051489.1;Parent=gene-LDO49_RS05110;Dbxref=GenBank:WP_224051489.1;Name=WP_224051489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549859.1;locus_tag=LDO49_RS05110;product=phosphatase PAP2 family protein;protein_id=WP_224051489.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 42436 44079 . - . ID=gene-LDO49_RS05115;Name=LDO49_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05115;old_locus_tag=BCEP4_1230038 NZ_CAJZAV010000028.1 Protein Homology CDS 42436 44079 . - 0 ID=cds-WP_048027378.1;Parent=gene-LDO49_RS05115;Dbxref=GenBank:WP_048027378.1;Name=WP_048027378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759221.1;locus_tag=LDO49_RS05115;product=DUF2334 domain-containing protein;protein_id=WP_048027378.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 44097 44363 . - . ID=gene-LDO49_RS05120;Name=LDO49_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05120 NZ_CAJZAV010000028.1 GeneMarkS-2+ CDS 44097 44363 . - 0 ID=cds-WP_124923071.1;Parent=gene-LDO49_RS05120;Dbxref=GenBank:WP_124923071.1;Name=WP_124923071.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS05120;product=hypothetical protein;protein_id=WP_124923071.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq pseudogene 45164 45364 . - . ID=gene-LDO49_RS05125;Name=LDO49_RS05125;end_range=45364,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS05125;partial=true;pseudo=true;start_range=.,45164 NZ_CAJZAV010000028.1 Protein Homology CDS 45164 45364 . - 0 ID=cds-LDO49_RS05125;Parent=gene-LDO49_RS05125;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=45364,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732910.1;locus_tag=LDO49_RS05125;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,45164;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 45376 46563 . - . ID=gene-LDO49_RS05130;Name=LDO49_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05130;old_locus_tag=BCEP4_1230041 NZ_CAJZAV010000028.1 Protein Homology CDS 45376 46563 . - 0 ID=cds-WP_224051490.1;Parent=gene-LDO49_RS05130;Dbxref=GenBank:WP_224051490.1;Name=WP_224051490.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549830.1;locus_tag=LDO49_RS05130;product=M20 aminoacylase family protein;protein_id=WP_224051490.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 46633 48102 . - . ID=gene-LDO49_RS05135;Name=LDO49_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05135;old_locus_tag=BCEP4_1230042 NZ_CAJZAV010000028.1 Protein Homology CDS 46633 48102 . - 0 ID=cds-WP_059492881.1;Parent=gene-LDO49_RS05135;Dbxref=GenBank:WP_059492881.1;Name=WP_059492881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661234.1;locus_tag=LDO49_RS05135;product=aldehyde dehydrogenase family protein;protein_id=WP_059492881.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 48295 49620 . - . ID=gene-LDO49_RS05140;Name=LDO49_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05140;old_locus_tag=BCEP4_1230043 NZ_CAJZAV010000028.1 Protein Homology CDS 48295 49620 . - 0 ID=cds-WP_060128406.1;Parent=gene-LDO49_RS05140;Dbxref=GenBank:WP_060128406.1;Name=WP_060128406.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661232.1;locus_tag=LDO49_RS05140;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_060128406.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 49623 50357 . - . ID=gene-LDO49_RS05145;Name=LDO49_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05145;old_locus_tag=BCEP4_1230044 NZ_CAJZAV010000028.1 Protein Homology CDS 49623 50357 . - 0 ID=cds-WP_224051491.1;Parent=gene-LDO49_RS05145;Dbxref=GenBank:WP_224051491.1;Name=WP_224051491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758405.1;locus_tag=LDO49_RS05145;product=cupin domain-containing protein;protein_id=WP_224051491.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 50449 50913 . - . ID=gene-LDO49_RS05150;Name=LDO49_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05150;old_locus_tag=BCEP4_1230045 NZ_CAJZAV010000028.1 Protein Homology CDS 50449 50913 . - 0 ID=cds-WP_124627513.1;Parent=gene-LDO49_RS05150;Dbxref=GenBank:WP_124627513.1;Name=WP_124627513.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661230.1;locus_tag=LDO49_RS05150;product=helix-turn-helix domain-containing protein;protein_id=WP_124627513.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 51021 52298 . - . ID=gene-LDO49_RS05155;Name=LDO49_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05155;old_locus_tag=BCEP4_1230046 NZ_CAJZAV010000028.1 Protein Homology CDS 51021 52298 . - 0 ID=cds-WP_165843481.1;Parent=gene-LDO49_RS05155;Dbxref=GenBank:WP_165843481.1;Name=WP_165843481.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372397.1;locus_tag=LDO49_RS05155;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_165843481.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 52496 54370 . - . ID=gene-LDO49_RS05160;Name=LDO49_RS05160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05160;old_locus_tag=BCEP4_1230047 NZ_CAJZAV010000028.1 Protein Homology CDS 52496 54370 . - 0 ID=cds-WP_224051492.1;Parent=gene-LDO49_RS05160;Dbxref=GenBank:WP_224051492.1;Name=WP_224051492.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880470.1;locus_tag=LDO49_RS05160;product=ABC transporter ATP-binding protein;protein_id=WP_224051492.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 54370 55329 . - . ID=gene-LDO49_RS05165;Name=LDO49_RS05165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05165;old_locus_tag=BCEP4_1230048 NZ_CAJZAV010000028.1 Protein Homology CDS 54370 55329 . - 0 ID=cds-WP_021156526.1;Parent=gene-LDO49_RS05165;Dbxref=GenBank:WP_021156526.1;Name=WP_021156526.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726135.1;locus_tag=LDO49_RS05165;product=ABC transporter permease;protein_id=WP_021156526.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 55360 56313 . - . ID=gene-LDO49_RS05170;Name=LDO49_RS05170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05170;old_locus_tag=BCEP4_1230049 NZ_CAJZAV010000028.1 Protein Homology CDS 55360 56313 . - 0 ID=cds-WP_048027389.1;Parent=gene-LDO49_RS05170;Dbxref=GenBank:WP_048027389.1;Name=WP_048027389.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335753.1;locus_tag=LDO49_RS05170;product=ABC transporter permease;protein_id=WP_048027389.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 56393 57979 . - . ID=gene-LDO49_RS05175;Name=LDO49_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05175;old_locus_tag=BCEP4_1230050 NZ_CAJZAV010000028.1 Protein Homology CDS 56393 57979 . - 0 ID=cds-WP_021156524.1;Parent=gene-LDO49_RS05175;Dbxref=GenBank:WP_021156524.1;Name=WP_021156524.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661225.1;locus_tag=LDO49_RS05175;product=ABC transporter substrate-binding protein;protein_id=WP_021156524.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 58729 60267 . - . ID=gene-LDO49_RS05180;Name=LDO49_RS05180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05180;old_locus_tag=BCEP4_1230052 NZ_CAJZAV010000028.1 Protein Homology CDS 58729 60267 . - 0 ID=cds-WP_224051493.1;Parent=gene-LDO49_RS05180;Dbxref=GenBank:WP_224051493.1;Name=WP_224051493.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762108.1;locus_tag=LDO49_RS05180;product=methyl-accepting chemotaxis protein;protein_id=WP_224051493.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 60442 61110 . - . ID=gene-LDO49_RS05185;Name=LDO49_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05185;old_locus_tag=BCEP4_1230053 NZ_CAJZAV010000028.1 Protein Homology CDS 60442 61110 . - 0 ID=cds-WP_021156521.1;Parent=gene-LDO49_RS05185;Dbxref=GenBank:WP_021156521.1;Name=WP_021156521.1;Ontology_term=GO:0019120;gbkey=CDS;go_function=hydrolase activity%2C acting on acid halide bonds%2C in C-halide compounds|0019120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549842.1;locus_tag=LDO49_RS05185;product=haloacid dehalogenase type II;protein_id=WP_021156521.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 61543 62403 . + . ID=gene-LDO49_RS05190;Name=LDO49_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05190;old_locus_tag=BCEP4_1230054 NZ_CAJZAV010000028.1 Protein Homology CDS 61543 62403 . + 0 ID=cds-WP_027792827.1;Parent=gene-LDO49_RS05190;Dbxref=GenBank:WP_027792827.1;Name=WP_027792827.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482807.1;locus_tag=LDO49_RS05190;product=GNAT family N-acetyltransferase;protein_id=WP_027792827.1;transl_table=11 NZ_CAJZAV010000028.1 RefSeq pseudogene 62416 62732 . + . ID=gene-LDO49_RS05195;Name=LDO49_RS05195;end_range=62732,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS05195;old_locus_tag=BCEP4_1230055;partial=true;pseudo=true NZ_CAJZAV010000028.1 Protein Homology CDS 62416 62732 . + 0 ID=cds-LDO49_RS05195;Parent=gene-LDO49_RS05195;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=62732,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880483.1;locus_tag=LDO49_RS05195;partial=true;product=glyoxylate/hydroxypyruvate reductase A;pseudo=true;transl_table=11 NZ_CAJZAV010000028.1 RefSeq gene 62743 62892 . + . ID=gene-LDO49_RS37805;Name=LDO49_RS37805;end_range=62892,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37805;partial=true;start_range=.,62743 NZ_CAJZAV010000028.1 Protein Homology CDS 62743 62892 . + 1 ID=cds-WP_443797912.1;Parent=gene-LDO49_RS37805;Dbxref=GenBank:WP_443797912.1;Name=WP_443797912.1;Ontology_term=GO:0051287;end_range=62892,.;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880483.1;locus_tag=LDO49_RS37805;partial=true;product=NAD(P)-dependent oxidoreductase;protein_id=WP_443797912.1;start_range=.,62743;transl_table=11 ##sequence-region NZ_CAJZAV010000029.1 1 18379 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000029.1 RefSeq region 1 18379 . + . ID=NZ_CAJZAV010000029.1:1..18379;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_124 NZ_CAJZAV010000029.1 RefSeq pseudogene 1 122 . + . ID=gene-LDO49_RS05200;Name=LDO49_RS05200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS05200;old_locus_tag=BCEP4_1240001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000029.1 Protein Homology CDS 1 122 . + 2 ID=cds-LDO49_RS05200;Parent=gene-LDO49_RS05200;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011286074.1;locus_tag=LDO49_RS05200;partial=true;product=elongation factor Tu;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000029.1 RefSeq gene 182 257 . + . ID=gene-LDO49_RS05205;Name=LDO49_RS05205;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS05205;old_locus_tag=BCEP4_TRNA24 NZ_CAJZAV010000029.1 tRNAscan-SE tRNA 182 257 . + . ID=rna-LDO49_RS05205;Parent=gene-LDO49_RS05205;anticodon=(pos:215..217);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS05205;product=tRNA-Trp NZ_CAJZAV010000029.1 tRNAscan-SE exon 182 257 . + . ID=exon-LDO49_RS05205-1;Parent=rna-LDO49_RS05205;anticodon=(pos:215..217);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS05205;product=tRNA-Trp NZ_CAJZAV010000029.1 RefSeq gene 301 681 . + . ID=gene-LDO49_RS05210;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=LDO49_RS05210;old_locus_tag=BCEP4_1240003 NZ_CAJZAV010000029.1 Protein Homology CDS 301 681 . + 0 ID=cds-WP_006482892.1;Parent=gene-LDO49_RS05210;Dbxref=GenBank:WP_006482892.1;Name=WP_006482892.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734344.1;locus_tag=LDO49_RS05210;product=preprotein translocase subunit SecE;protein_id=WP_006482892.1;transl_table=11 NZ_CAJZAV010000029.1 RefSeq gene 683 1240 . + . ID=gene-LDO49_RS05215;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=LDO49_RS05215;old_locus_tag=BCEP4_1240004 NZ_CAJZAV010000029.1 Protein Homology CDS 683 1240 . + 0 ID=cds-WP_006400672.1;Parent=gene-LDO49_RS05215;Dbxref=GenBank:WP_006400672.1;Name=WP_006400672.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013434764.1;locus_tag=LDO49_RS05215;product=transcription termination/antitermination protein NusG;protein_id=WP_006400672.1;transl_table=11 NZ_CAJZAV010000029.1 RefSeq gene 1382 1813 . + . ID=gene-LDO49_RS05220;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=LDO49_RS05220;old_locus_tag=BCEP4_1240005 NZ_CAJZAV010000029.1 Protein Homology CDS 1382 1813 . + 0 ID=cds-WP_006477201.1;Parent=gene-LDO49_RS05220;Dbxref=GenBank:WP_006477201.1;Name=WP_006477201.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012251786.1;locus_tag=LDO49_RS05220;product=50S ribosomal protein L11;protein_id=WP_006477201.1;transl_table=11 NZ_CAJZAV010000029.1 RefSeq gene 1814 2512 . + . ID=gene-LDO49_RS05225;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=LDO49_RS05225;old_locus_tag=BCEP4_1240006 NZ_CAJZAV010000029.1 Protein Homology CDS 1814 2512 . + 0 ID=cds-WP_006482906.1;Parent=gene-LDO49_RS05225;Dbxref=GenBank:WP_006482906.1;Name=WP_006482906.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407020.1;locus_tag=LDO49_RS05225;product=50S ribosomal protein L1;protein_id=WP_006482906.1;transl_table=11 NZ_CAJZAV010000029.1 RefSeq gene 2822 3319 . + . ID=gene-LDO49_RS05230;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=LDO49_RS05230;old_locus_tag=BCEP4_1240007 NZ_CAJZAV010000029.1 Protein Homology CDS 2822 3319 . + 0 ID=cds-WP_021161756.1;Parent=gene-LDO49_RS05230;Dbxref=GenBank:WP_021161756.1;Name=WP_021161756.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898361.1;locus_tag=LDO49_RS05230;product=50S ribosomal protein L10;protein_id=WP_021161756.1;transl_table=11 NZ_CAJZAV010000029.1 RefSeq gene 3383 3757 . + . ID=gene-LDO49_RS05235;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=LDO49_RS05235;old_locus_tag=BCEP4_1240008 NZ_CAJZAV010000029.1 Protein Homology CDS 3383 3757 . + 0 ID=cds-WP_021161757.1;Parent=gene-LDO49_RS05235;Dbxref=GenBank:WP_021161757.1;Name=WP_021161757.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029839.1;locus_tag=LDO49_RS05235;product=50S ribosomal protein L7/L12;protein_id=WP_021161757.1;transl_table=11 NZ_CAJZAV010000029.1 RefSeq gene 4135 8241 . + . ID=gene-LDO49_RS05240;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=LDO49_RS05240;old_locus_tag=BCEP4_1240009 NZ_CAJZAV010000029.1 Protein Homology CDS 4135 8241 . + 0 ID=cds-WP_027788581.1;Parent=gene-LDO49_RS05240;Dbxref=GenBank:WP_027788581.1;Name=WP_027788581.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029840.1;locus_tag=LDO49_RS05240;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_027788581.1;transl_table=11 NZ_CAJZAV010000029.1 RefSeq gene 8263 12510 . + . ID=gene-LDO49_RS05245;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=LDO49_RS05245;old_locus_tag=BCEP4_1240010 NZ_CAJZAV010000029.1 Protein Homology CDS 8263 12510 . + 0 ID=cds-WP_021161759.1;Parent=gene-LDO49_RS05245;Dbxref=GenBank:WP_021161759.1;Name=WP_021161759.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493357.1;locus_tag=LDO49_RS05245;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_021161759.1;transl_table=11 NZ_CAJZAV010000029.1 RefSeq gene 12828 14675 . + . ID=gene-LDO49_RS05250;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=LDO49_RS05250;old_locus_tag=BCEP4_1240011 NZ_CAJZAV010000029.1 Protein Homology CDS 12828 14675 . + 0 ID=cds-WP_224051494.1;Parent=gene-LDO49_RS05250;Dbxref=GenBank:WP_224051494.1;Name=WP_224051494.1;Ontology_term=GO:0006310,GO:0009432,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883002.1;locus_tag=LDO49_RS05250;product=DNA helicase RecQ;protein_id=WP_224051494.1;transl_table=11 NZ_CAJZAV010000029.1 RefSeq gene 14903 15283 . + . ID=gene-LDO49_RS05255;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=LDO49_RS05255;old_locus_tag=BCEP4_1240012 NZ_CAJZAV010000029.1 Protein Homology CDS 14903 15283 . + 0 ID=cds-WP_006400662.1;Parent=gene-LDO49_RS05255;Dbxref=GenBank:WP_006400662.1;Name=WP_006400662.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998493.1;locus_tag=LDO49_RS05255;product=30S ribosomal protein S12;protein_id=WP_006400662.1;transl_table=11 NZ_CAJZAV010000029.1 RefSeq gene 15456 15926 . + . ID=gene-LDO49_RS05260;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=LDO49_RS05260;old_locus_tag=BCEP4_1240013 NZ_CAJZAV010000029.1 Protein Homology CDS 15456 15926 . + 0 ID=cds-WP_006477195.1;Parent=gene-LDO49_RS05260;Dbxref=GenBank:WP_006477195.1;Name=WP_006477195.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008649176.1;locus_tag=LDO49_RS05260;product=30S ribosomal protein S7;protein_id=WP_006477195.1;transl_table=11 NZ_CAJZAV010000029.1 RefSeq gene 16050 18152 . + . ID=gene-LDO49_RS05265;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=LDO49_RS05265;old_locus_tag=BCEP4_1240014 NZ_CAJZAV010000029.1 Protein Homology CDS 16050 18152 . + 0 ID=cds-WP_021161762.1;Parent=gene-LDO49_RS05265;Dbxref=GenBank:WP_021161762.1;Name=WP_021161762.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482929.1;locus_tag=LDO49_RS05265;product=elongation factor G;protein_id=WP_021161762.1;transl_table=11 NZ_CAJZAV010000029.1 RefSeq gene 18239 18379 . + . ID=gene-LDO49_RS05270;Name=LDO49_RS05270;end_range=18379,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05270;partial=true;start_range=.,18239 NZ_CAJZAV010000029.1 Protein Homology CDS 18239 18379 . + 2 ID=cds-WP_372585828.1;Parent=gene-LDO49_RS05270;Dbxref=GenBank:WP_372585828.1;Name=WP_372585828.1;Ontology_term=GO:0005525;end_range=18379,.;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011901887.1;locus_tag=LDO49_RS05270;partial=true;product=EF-Tu/IF-2/RF-3 family GTPase;protein_id=WP_372585828.1;start_range=.,18239;transl_table=11 ##sequence-region NZ_CAJZAV010000030.1 1 61958 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000030.1 RefSeq region 1 61958 . + . ID=NZ_CAJZAV010000030.1:1..61958;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_125 NZ_CAJZAV010000030.1 RefSeq gene 88 1392 . - . ID=gene-LDO49_RS05275;Name=LDO49_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05275;old_locus_tag=BCEP4_1250001 NZ_CAJZAV010000030.1 Protein Homology CDS 88 1392 . - 0 ID=cds-WP_027786748.1;Parent=gene-LDO49_RS05275;Dbxref=GenBank:WP_027786748.1;Name=WP_027786748.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753435.1;locus_tag=LDO49_RS05275;product=MFS transporter;protein_id=WP_027786748.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 1516 2274 . - . ID=gene-LDO49_RS05280;Name=LDO49_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05280;old_locus_tag=BCEP4_1250002 NZ_CAJZAV010000030.1 Protein Homology CDS 1516 2274 . - 0 ID=cds-WP_027786749.1;Parent=gene-LDO49_RS05280;Dbxref=GenBank:WP_027786749.1;Name=WP_027786749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543860.1;locus_tag=LDO49_RS05280;product=SDR family oxidoreductase;protein_id=WP_027786749.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 2366 3805 . - . ID=gene-LDO49_RS05285;Name=LDO49_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05285;old_locus_tag=BCEP4_1250003 NZ_CAJZAV010000030.1 Protein Homology CDS 2366 3805 . - 0 ID=cds-WP_021158433.1;Parent=gene-LDO49_RS05285;Dbxref=GenBank:WP_021158433.1;Name=WP_021158433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352864.1;locus_tag=LDO49_RS05285;product=aldehyde dehydrogenase family protein;protein_id=WP_021158433.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 4039 4566 . + . ID=gene-LDO49_RS05290;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=LDO49_RS05290;old_locus_tag=BCEP4_1250004 NZ_CAJZAV010000030.1 Protein Homology CDS 4039 4566 . + 0 ID=cds-WP_027786751.1;Parent=gene-LDO49_RS05290;Dbxref=GenBank:WP_027786751.1;Name=WP_027786751.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007587974.1;locus_tag=LDO49_RS05290;product=inorganic diphosphatase;protein_id=WP_027786751.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 4623 5552 . - . ID=gene-LDO49_RS05295;Name=LDO49_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05295;old_locus_tag=BCEP4_1250005 NZ_CAJZAV010000030.1 Protein Homology CDS 4623 5552 . - 0 ID=cds-WP_224051495.1;Parent=gene-LDO49_RS05295;Dbxref=GenBank:WP_224051495.1;Name=WP_224051495.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489661.1;locus_tag=LDO49_RS05295;product=GIY-YIG nuclease family protein;protein_id=WP_224051495.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 5602 6636 . - . ID=gene-LDO49_RS05300;Name=LDO49_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05300;old_locus_tag=BCEP4_1250007 NZ_CAJZAV010000030.1 Protein Homology CDS 5602 6636 . - 0 ID=cds-WP_060069632.1;Parent=gene-LDO49_RS05300;Dbxref=GenBank:WP_060069632.1;Name=WP_060069632.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694356.1;locus_tag=LDO49_RS05300;product=helix-turn-helix transcriptional regulator;protein_id=WP_060069632.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 6787 9033 . + . ID=gene-LDO49_RS05305;Name=LDO49_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05305;old_locus_tag=BCEP4_1250006 NZ_CAJZAV010000030.1 Protein Homology CDS 6787 9033 . + 0 ID=cds-WP_060069629.1;Parent=gene-LDO49_RS05305;Dbxref=GenBank:WP_060069629.1;Name=WP_060069629.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753429.1;locus_tag=LDO49_RS05305;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=WP_060069629.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 9129 10307 . - . ID=gene-LDO49_RS05310;Name=LDO49_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05310;old_locus_tag=BCEP4_1250008 NZ_CAJZAV010000030.1 Protein Homology CDS 9129 10307 . - 0 ID=cds-WP_124475417.1;Parent=gene-LDO49_RS05310;Dbxref=GenBank:WP_124475417.1;Name=WP_124475417.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364435.1;locus_tag=LDO49_RS05310;product=GNAT family N-acetyltransferase;protein_id=WP_124475417.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 10419 12134 . + . ID=gene-LDO49_RS05315;Name=LDO49_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05315;old_locus_tag=BCEP4_1250009 NZ_CAJZAV010000030.1 Protein Homology CDS 10419 12134 . + 0 ID=cds-WP_059590429.1;Parent=gene-LDO49_RS05315;Dbxref=GenBank:WP_059590429.1;Name=WP_059590429.1;Ontology_term=GO:0009435,GO:0003952,GO:0005524;gbkey=CDS;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,ATP binding|0005524||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545936.1;locus_tag=LDO49_RS05315;product=NAD+ synthase;protein_id=WP_059590429.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 12218 12556 . + . ID=gene-LDO49_RS05320;Name=LDO49_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05320;old_locus_tag=BCEP4_1250010 NZ_CAJZAV010000030.1 Protein Homology CDS 12218 12556 . + 0 ID=cds-WP_006398637.1;Parent=gene-LDO49_RS05320;Dbxref=GenBank:WP_006398637.1;Name=WP_006398637.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018419771.1;locus_tag=LDO49_RS05320;product=P-II family nitrogen regulator;protein_id=WP_006398637.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 12694 13773 . - . ID=gene-LDO49_RS05325;Name=LDO49_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05325;old_locus_tag=BCEP4_1250011 NZ_CAJZAV010000030.1 Protein Homology CDS 12694 13773 . - 0 ID=cds-WP_021158488.1;Parent=gene-LDO49_RS05325;Dbxref=GenBank:WP_021158488.1;Name=WP_021158488.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398638.1;locus_tag=LDO49_RS05325;product=porin;protein_id=WP_021158488.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 14337 15263 . - . ID=gene-LDO49_RS05330;Name=LDO49_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05330;old_locus_tag=BCEP4_1250013 NZ_CAJZAV010000030.1 Protein Homology CDS 14337 15263 . - 0 ID=cds-WP_059676490.1;Parent=gene-LDO49_RS05330;Dbxref=GenBank:WP_059676490.1;Name=WP_059676490.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333846.1;locus_tag=LDO49_RS05330;product=LysR family transcriptional regulator;protein_id=WP_059676490.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 15397 15894 . + . ID=gene-LDO49_RS05335;Name=LDO49_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05335;old_locus_tag=BCEP4_1250014 NZ_CAJZAV010000030.1 Protein Homology CDS 15397 15894 . + 0 ID=cds-WP_021158490.1;Parent=gene-LDO49_RS05335;Dbxref=GenBank:WP_021158490.1;Name=WP_021158490.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212920.1;locus_tag=LDO49_RS05335;product=GNAT family N-acetyltransferase;protein_id=WP_021158490.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 15971 16750 . - . ID=gene-LDO49_RS05340;Name=LDO49_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05340;old_locus_tag=BCEP4_1250015 NZ_CAJZAV010000030.1 Protein Homology CDS 15971 16750 . - 0 ID=cds-WP_059486218.1;Parent=gene-LDO49_RS05340;Dbxref=GenBank:WP_059486218.1;Name=WP_059486218.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896370.1;locus_tag=LDO49_RS05340;product=ABC transporter ATP-binding protein;protein_id=WP_059486218.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 16769 17482 . - . ID=gene-LDO49_RS05345;Name=LDO49_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05345;old_locus_tag=BCEP4_1250016 NZ_CAJZAV010000030.1 Protein Homology CDS 16769 17482 . - 0 ID=cds-WP_042974080.1;Parent=gene-LDO49_RS05345;Dbxref=GenBank:WP_042974080.1;Name=WP_042974080.1;Ontology_term=GO:0022857,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065252.1;locus_tag=LDO49_RS05345;product=ABC transporter permease;protein_id=WP_042974080.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 17479 18168 . - . ID=gene-LDO49_RS05350;Name=LDO49_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05350;old_locus_tag=BCEP4_1250017 NZ_CAJZAV010000030.1 Protein Homology CDS 17479 18168 . - 0 ID=cds-WP_021158491.1;Parent=gene-LDO49_RS05350;Dbxref=GenBank:WP_021158491.1;Name=WP_021158491.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522525.1;locus_tag=LDO49_RS05350;product=ABC transporter permease;protein_id=WP_021158491.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 18410 19192 . - . ID=gene-LDO49_RS05355;Name=LDO49_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05355;old_locus_tag=BCEP4_1250018 NZ_CAJZAV010000030.1 Protein Homology CDS 18410 19192 . - 0 ID=cds-WP_060069624.1;Parent=gene-LDO49_RS05355;Dbxref=GenBank:WP_060069624.1;Name=WP_060069624.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497154.1;locus_tag=LDO49_RS05355;product=ABC transporter substrate-binding protein;protein_id=WP_060069624.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 19562 20257 . + . ID=gene-LDO49_RS05360;Name=LDO49_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05360;old_locus_tag=BCEP4_1250020 NZ_CAJZAV010000030.1 Protein Homology CDS 19562 20257 . + 0 ID=cds-WP_060069622.1;Parent=gene-LDO49_RS05360;Dbxref=GenBank:WP_060069622.1;Name=WP_060069622.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553877.1;locus_tag=LDO49_RS05360;product=pirin family protein;protein_id=WP_060069622.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 20331 20882 . - . ID=gene-LDO49_RS05365;Name=LDO49_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05365;old_locus_tag=BCEP4_1250021 NZ_CAJZAV010000030.1 Protein Homology CDS 20331 20882 . - 0 ID=cds-WP_060069620.1;Parent=gene-LDO49_RS05365;Dbxref=GenBank:WP_060069620.1;Name=WP_060069620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497152.1;locus_tag=LDO49_RS05365;product=periplasmic heavy metal sensor;protein_id=WP_060069620.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 21107 21832 . + . ID=gene-LDO49_RS05370;Name=LDO49_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05370;old_locus_tag=BCEP4_1250022 NZ_CAJZAV010000030.1 Protein Homology CDS 21107 21832 . + 0 ID=cds-WP_021158495.1;Parent=gene-LDO49_RS05370;Dbxref=GenBank:WP_021158495.1;Name=WP_021158495.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699030.1;locus_tag=LDO49_RS05370;product=response regulator;protein_id=WP_021158495.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 21816 23132 . + . ID=gene-LDO49_RS05375;Name=LDO49_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05375;old_locus_tag=BCEP4_1250023 NZ_CAJZAV010000030.1 Protein Homology CDS 21816 23132 . + 0 ID=cds-WP_021158496.1;Parent=gene-LDO49_RS05375;Dbxref=GenBank:WP_021158496.1;Name=WP_021158496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694353.1;locus_tag=LDO49_RS05375;product=ATP-binding protein;protein_id=WP_021158496.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 23175 23441 . - . ID=gene-LDO49_RS05380;Name=LDO49_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05380;old_locus_tag=BCEP4_1250024 NZ_CAJZAV010000030.1 Protein Homology CDS 23175 23441 . - 0 ID=cds-WP_027786765.1;Parent=gene-LDO49_RS05380;Dbxref=GenBank:WP_027786765.1;Name=WP_027786765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198606.1;locus_tag=LDO49_RS05380;product=double-stranded DNA-specific endonuclease;protein_id=WP_027786765.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 23952 25709 . + . ID=gene-LDO49_RS05385;Name=LDO49_RS05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05385;old_locus_tag=BCEP4_1250025 NZ_CAJZAV010000030.1 Protein Homology CDS 23952 25709 . + 0 ID=cds-WP_059496622.1;Parent=gene-LDO49_RS05385;Dbxref=GenBank:WP_059496622.1;Name=WP_059496622.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892433.1;locus_tag=LDO49_RS05385;product=ABC transporter permease;protein_id=WP_059496622.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 25732 27069 . + . ID=gene-LDO49_RS05390;Name=LDO49_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05390;old_locus_tag=BCEP4_1250026 NZ_CAJZAV010000030.1 Protein Homology CDS 25732 27069 . + 0 ID=cds-WP_021158501.1;Parent=gene-LDO49_RS05390;Dbxref=GenBank:WP_021158501.1;Name=WP_021158501.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892432.1;locus_tag=LDO49_RS05390;product=ABC transporter ATP-binding protein;protein_id=WP_021158501.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 27215 27790 . + . ID=gene-LDO49_RS05395;Name=LDO49_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05395;old_locus_tag=BCEP4_1250027 NZ_CAJZAV010000030.1 GeneMarkS-2+ CDS 27215 27790 . + 0 ID=cds-WP_224051496.1;Parent=gene-LDO49_RS05395;Dbxref=GenBank:WP_224051496.1;Name=WP_224051496.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS05395;product=hypothetical protein;protein_id=WP_224051496.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 27855 28337 . + . ID=gene-LDO49_RS05400;Name=LDO49_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05400;old_locus_tag=BCEP4_1250028 NZ_CAJZAV010000030.1 Protein Homology CDS 27855 28337 . + 0 ID=cds-WP_048028495.1;Parent=gene-LDO49_RS05400;Dbxref=GenBank:WP_048028495.1;Name=WP_048028495.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024764.6;locus_tag=LDO49_RS05400;product=tetratricopeptide repeat protein;protein_id=WP_048028495.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 28407 29093 . + . ID=gene-LDO49_RS05405;Name=LDO49_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05405;old_locus_tag=BCEP4_1250029 NZ_CAJZAV010000030.1 Protein Homology CDS 28407 29093 . + 0 ID=cds-WP_060072185.1;Parent=gene-LDO49_RS05405;Dbxref=GenBank:WP_060072185.1;Name=WP_060072185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020425127.1;locus_tag=LDO49_RS05405;product=hypothetical protein;protein_id=WP_060072185.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 29163 29657 . - . ID=gene-LDO49_RS05410;Name=LDO49_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05410;old_locus_tag=BCEP4_1250030 NZ_CAJZAV010000030.1 Protein Homology CDS 29163 29657 . - 0 ID=cds-WP_060057410.1;Parent=gene-LDO49_RS05410;Dbxref=GenBank:WP_060057410.1;Name=WP_060057410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896382.1;locus_tag=LDO49_RS05410;product=hypothetical protein;protein_id=WP_060057410.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 29654 30205 . - . ID=gene-LDO49_RS05415;Name=LDO49_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05415;old_locus_tag=BCEP4_1250031 NZ_CAJZAV010000030.1 Protein Homology CDS 29654 30205 . - 0 ID=cds-WP_021158516.1;Parent=gene-LDO49_RS05415;Dbxref=GenBank:WP_021158516.1;Name=WP_021158516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405717.1;locus_tag=LDO49_RS05415;product=hypothetical protein;protein_id=WP_021158516.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 30494 30691 . + . ID=gene-LDO49_RS05420;Name=LDO49_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05420;old_locus_tag=BCEP4_1250033 NZ_CAJZAV010000030.1 Protein Homology CDS 30494 30691 . + 0 ID=cds-WP_021158517.1;Parent=gene-LDO49_RS05420;Dbxref=GenBank:WP_021158517.1;Name=WP_021158517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896384.1;locus_tag=LDO49_RS05420;product=hypothetical protein;protein_id=WP_021158517.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 30833 32254 . + . ID=gene-LDO49_RS05425;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=LDO49_RS05425;old_locus_tag=BCEP4_1250034 NZ_CAJZAV010000030.1 Protein Homology CDS 30833 32254 . + 0 ID=cds-WP_060072123.1;Parent=gene-LDO49_RS05425;Dbxref=GenBank:WP_060072123.1;Name=WP_060072123.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601718.1;locus_tag=LDO49_RS05425;product=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming);protein_id=WP_060072123.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 32247 32840 . + . ID=gene-LDO49_RS05430;Name=LDO49_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05430;old_locus_tag=BCEP4_1250035 NZ_CAJZAV010000030.1 Protein Homology CDS 32247 32840 . + 0 ID=cds-WP_059590695.1;Parent=gene-LDO49_RS05430;Dbxref=GenBank:WP_059590695.1;Name=WP_059590695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352838.1;locus_tag=LDO49_RS05430;product=AAA family ATPase;protein_id=WP_059590695.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 32865 34232 . - . ID=gene-LDO49_RS05435;Name=LDO49_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05435;old_locus_tag=BCEP4_1250037 NZ_CAJZAV010000030.1 Protein Homology CDS 32865 34232 . - 0 ID=cds-WP_060072126.1;Parent=gene-LDO49_RS05435;Dbxref=GenBank:WP_060072126.1;Name=WP_060072126.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352837.1;locus_tag=LDO49_RS05435;product=MFS transporter;protein_id=WP_060072126.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 34392 34772 . - . ID=gene-LDO49_RS05440;Name=LDO49_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05440;old_locus_tag=BCEP4_1250038 NZ_CAJZAV010000030.1 Protein Homology CDS 34392 34772 . - 0 ID=cds-WP_059816053.1;Parent=gene-LDO49_RS05440;Dbxref=GenBank:WP_059816053.1;Name=WP_059816053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896388.1;locus_tag=LDO49_RS05440;product=DUF5594 family protein;protein_id=WP_059816053.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 34890 35291 . + . ID=gene-LDO49_RS05445;Name=LDO49_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05445;old_locus_tag=BCEP4_1250036 NZ_CAJZAV010000030.1 Protein Homology CDS 34890 35291 . + 0 ID=cds-WP_021158522.1;Parent=gene-LDO49_RS05445;Dbxref=GenBank:WP_021158522.1;Name=WP_021158522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364418.1;locus_tag=LDO49_RS05445;product=hypothetical protein;protein_id=WP_021158522.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 35498 35803 . - . ID=gene-LDO49_RS05450;Name=LDO49_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05450;old_locus_tag=BCEP4_1250039 NZ_CAJZAV010000030.1 Protein Homology CDS 35498 35803 . - 0 ID=cds-WP_021158523.1;Parent=gene-LDO49_RS05450;Dbxref=GenBank:WP_021158523.1;Name=WP_021158523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328976.1;locus_tag=LDO49_RS05450;product=hypothetical protein;protein_id=WP_021158523.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 35947 36447 . + . ID=gene-LDO49_RS05455;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=LDO49_RS05455;old_locus_tag=BCEP4_1250040 NZ_CAJZAV010000030.1 Protein Homology CDS 35947 36447 . + 0 ID=cds-WP_060072128.1;Parent=gene-LDO49_RS05455;Dbxref=GenBank:WP_060072128.1;Name=WP_060072128.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364416.1;locus_tag=LDO49_RS05455;product=serine protease inhibitor ecotin;protein_id=WP_060072128.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 36483 37097 . - . ID=gene-LDO49_RS05460;Name=LDO49_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05460;old_locus_tag=BCEP4_1250041 NZ_CAJZAV010000030.1 Protein Homology CDS 36483 37097 . - 0 ID=cds-WP_224051497.1;Parent=gene-LDO49_RS05460;Dbxref=GenBank:WP_224051497.1;Name=WP_224051497.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352832.1;locus_tag=LDO49_RS05460;product=TetR/AcrR family transcriptional regulator;protein_id=WP_224051497.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 37213 37953 . + . ID=gene-LDO49_RS05465;Name=LDO49_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05465;old_locus_tag=BCEP4_1250042 NZ_CAJZAV010000030.1 Protein Homology CDS 37213 37953 . + 0 ID=cds-WP_059498171.1;Parent=gene-LDO49_RS05465;Dbxref=GenBank:WP_059498171.1;Name=WP_059498171.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212934.1;locus_tag=LDO49_RS05465;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_059498171.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 38005 38337 . - . ID=gene-LDO49_RS05470;Name=LDO49_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05470;old_locus_tag=BCEP4_1250043 NZ_CAJZAV010000030.1 Protein Homology CDS 38005 38337 . - 0 ID=cds-WP_021158527.1;Parent=gene-LDO49_RS05470;Dbxref=GenBank:WP_021158527.1;Name=WP_021158527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487649.1;locus_tag=LDO49_RS05470;product=hypothetical protein;protein_id=WP_021158527.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 38551 38627 . - . ID=gene-LDO49_RS05475;Name=LDO49_RS05475;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS05475;old_locus_tag=BCEP4_TRNA31 NZ_CAJZAV010000030.1 tRNAscan-SE tRNA 38551 38627 . - . ID=rna-LDO49_RS05475;Parent=gene-LDO49_RS05475;anticodon=(pos:complement(38591..38593));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS05475;product=tRNA-Met NZ_CAJZAV010000030.1 tRNAscan-SE exon 38551 38627 . - . ID=exon-LDO49_RS05475-1;Parent=rna-LDO49_RS05475;anticodon=(pos:complement(38591..38593));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS05475;product=tRNA-Met NZ_CAJZAV010000030.1 RefSeq gene 39087 39818 . - . ID=gene-LDO49_RS05480;Name=LDO49_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05480;old_locus_tag=BCEP4_1250045 NZ_CAJZAV010000030.1 Protein Homology CDS 39087 39818 . - 0 ID=cds-WP_060072132.1;Parent=gene-LDO49_RS05480;Dbxref=GenBank:WP_060072132.1;Name=WP_060072132.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024098.6;locus_tag=LDO49_RS05480;product=DUF3800 domain-containing protein;protein_id=WP_060072132.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 39853 40785 . - . ID=gene-LDO49_RS05485;Name=LDO49_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05485;old_locus_tag=BCEP4_1250046 NZ_CAJZAV010000030.1 Protein Homology CDS 39853 40785 . - 0 ID=cds-WP_224051498.1;Parent=gene-LDO49_RS05485;Dbxref=GenBank:WP_224051498.1;Name=WP_224051498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013343502.1;locus_tag=LDO49_RS05485;product=hypothetical protein;protein_id=WP_224051498.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 40773 41660 . - . ID=gene-LDO49_RS05490;Name=LDO49_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05490;old_locus_tag=BCEP4_1250047 NZ_CAJZAV010000030.1 GeneMarkS-2+ CDS 40773 41660 . - 0 ID=cds-WP_224051500.1;Parent=gene-LDO49_RS05490;Dbxref=GenBank:WP_224051500.1;Name=WP_224051500.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS05490;product=hypothetical protein;protein_id=WP_224051500.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq pseudogene 41919 42023 . + . ID=gene-LDO49_RS05495;Name=LDO49_RS05495;end_range=42023,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS05495;partial=true;pseudo=true;start_range=.,41919 NZ_CAJZAV010000030.1 Protein Homology CDS 41919 42023 . + 0 ID=cds-LDO49_RS05495;Parent=gene-LDO49_RS05495;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=42023,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526690.1;locus_tag=LDO49_RS05495;partial=true;product=SOS response-associated peptidase family protein;pseudo=true;start_range=.,41919;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 42315 42953 . + . ID=gene-LDO49_RS05500;Name=LDO49_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05500;old_locus_tag=BCEP4_1250048 NZ_CAJZAV010000030.1 GeneMarkS-2+ CDS 42315 42953 . + 0 ID=cds-WP_124475323.1;Parent=gene-LDO49_RS05500;Dbxref=GenBank:WP_124475323.1;Name=WP_124475323.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS05500;product=hypothetical protein;protein_id=WP_124475323.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 43063 43626 . + . ID=gene-LDO49_RS05505;Name=LDO49_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05505;old_locus_tag=BCEP4_1250050 NZ_CAJZAV010000030.1 GeneMarkS-2+ CDS 43063 43626 . + 0 ID=cds-WP_124475324.1;Parent=gene-LDO49_RS05505;Dbxref=GenBank:WP_124475324.1;Name=WP_124475324.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS05505;product=hypothetical protein;protein_id=WP_124475324.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 44122 44196 . - . ID=gene-LDO49_RS05515;Name=LDO49_RS05515;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS05515;old_locus_tag=BCEP4_TRNA30 NZ_CAJZAV010000030.1 tRNAscan-SE tRNA 44122 44196 . - . ID=rna-LDO49_RS05515;Parent=gene-LDO49_RS05515;anticodon=(pos:complement(44161..44163));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS05515;product=tRNA-Arg NZ_CAJZAV010000030.1 tRNAscan-SE exon 44122 44196 . - . ID=exon-LDO49_RS05515-1;Parent=rna-LDO49_RS05515;anticodon=(pos:complement(44161..44163));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS05515;product=tRNA-Arg NZ_CAJZAV010000030.1 RefSeq gene 44348 44530 . - . ID=gene-LDO49_RS05520;Name=LDO49_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05520;old_locus_tag=BCEP4_1250053 NZ_CAJZAV010000030.1 Protein Homology CDS 44348 44530 . - 0 ID=cds-WP_006398668.1;Parent=gene-LDO49_RS05520;Dbxref=GenBank:WP_006398668.1;Name=WP_006398668.1;Ontology_term=GO:0043448,GO:0005506,GO:0009055;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=alkane catabolic process|0043448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186320.1;locus_tag=LDO49_RS05520;product=rubredoxin;protein_id=WP_006398668.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 44731 45135 . + . ID=gene-LDO49_RS05525;Name=LDO49_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05525;old_locus_tag=BCEP4_1250054 NZ_CAJZAV010000030.1 Protein Homology CDS 44731 45135 . + 0 ID=cds-WP_027786782.1;Parent=gene-LDO49_RS05525;Dbxref=GenBank:WP_027786782.1;Name=WP_027786782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328968.1;locus_tag=LDO49_RS05525;product=DUF4399 domain-containing protein;protein_id=WP_027786782.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 45345 47294 . + . ID=gene-LDO49_RS05530;Name=LDO49_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05530;old_locus_tag=BCEP4_1250055 NZ_CAJZAV010000030.1 Protein Homology CDS 45345 47294 . + 0 ID=cds-WP_048025384.1;Parent=gene-LDO49_RS05530;Dbxref=GenBank:WP_048025384.1;Name=WP_048025384.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602307.1;locus_tag=LDO49_RS05530;product=ATP-binding cassette domain-containing protein;protein_id=WP_048025384.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 47537 49519 . + . ID=gene-LDO49_RS05535;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=LDO49_RS05535;old_locus_tag=BCEP4_1250056 NZ_CAJZAV010000030.1 Protein Homology CDS 47537 49519 . + 0 ID=cds-WP_021158532.1;Parent=gene-LDO49_RS05535;Dbxref=GenBank:WP_021158532.1;Name=WP_021158532.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254672.1;locus_tag=LDO49_RS05535;product=DNA topoisomerase IV subunit B;protein_id=WP_021158532.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 49589 51910 . + . ID=gene-LDO49_RS05540;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=LDO49_RS05540;old_locus_tag=BCEP4_1250057 NZ_CAJZAV010000030.1 Protein Homology CDS 49589 51910 . + 0 ID=cds-WP_021158533.1;Parent=gene-LDO49_RS05540;Dbxref=GenBank:WP_021158533.1;Name=WP_021158533.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892382.1;locus_tag=LDO49_RS05540;product=DNA topoisomerase IV subunit A;protein_id=WP_021158533.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 52161 52619 . + . ID=gene-LDO49_RS05545;Name=LDO49_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05545;old_locus_tag=BCEP4_1250058 NZ_CAJZAV010000030.1 Protein Homology CDS 52161 52619 . + 0 ID=cds-WP_021158534.1;Parent=gene-LDO49_RS05545;Dbxref=GenBank:WP_021158534.1;Name=WP_021158534.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413474.1;locus_tag=LDO49_RS05545;product=CopD family protein;protein_id=WP_021158534.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 52686 53570 . - . ID=gene-LDO49_RS05550;Name=LDO49_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05550;old_locus_tag=BCEP4_1250059 NZ_CAJZAV010000030.1 Protein Homology CDS 52686 53570 . - 0 ID=cds-WP_021158535.1;Parent=gene-LDO49_RS05550;Dbxref=GenBank:WP_021158535.1;Name=WP_021158535.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185890.1;locus_tag=LDO49_RS05550;product=LysR family transcriptional regulator;protein_id=WP_021158535.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 53684 54130 . + . ID=gene-LDO49_RS05555;Name=LDO49_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05555;old_locus_tag=BCEP4_1250060 NZ_CAJZAV010000030.1 Protein Homology CDS 53684 54130 . + 0 ID=cds-WP_060072190.1;Parent=gene-LDO49_RS05555;Dbxref=GenBank:WP_060072190.1;Name=WP_060072190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352815.1;locus_tag=LDO49_RS05555;product=multidrug/biocide efflux PACE transporter;protein_id=WP_060072190.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 54179 55387 . - . ID=gene-LDO49_RS05560;Name=LDO49_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05560;old_locus_tag=BCEP4_1250061 NZ_CAJZAV010000030.1 Protein Homology CDS 54179 55387 . - 0 ID=cds-WP_060072136.1;Parent=gene-LDO49_RS05560;Dbxref=GenBank:WP_060072136.1;Name=WP_060072136.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352814.1;locus_tag=LDO49_RS05560;product=chromate transporter;protein_id=WP_060072136.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 55584 57923 . - . ID=gene-LDO49_RS05565;Name=LDO49_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05565;old_locus_tag=BCEP4_1250063 NZ_CAJZAV010000030.1 Protein Homology CDS 55584 57923 . - 0 ID=cds-WP_021158538.1;Parent=gene-LDO49_RS05565;Dbxref=GenBank:WP_021158538.1;Name=WP_021158538.1;Ontology_term=GO:0007165,GO:0005525,GO:0046872,GO:0052621,GO:0071111;gbkey=CDS;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758136.1;locus_tag=LDO49_RS05565;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_021158538.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 58142 59023 . - . ID=gene-LDO49_RS05570;Name=LDO49_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05570;old_locus_tag=BCEP4_1250065 NZ_CAJZAV010000030.1 Protein Homology CDS 58142 59023 . - 0 ID=cds-WP_021158540.1;Parent=gene-LDO49_RS05570;Dbxref=GenBank:WP_021158540.1;Name=WP_021158540.1;Ontology_term=GO:0009058,GO:0016853,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isomerase activity|0016853||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212951.1;locus_tag=LDO49_RS05570;product=PhzF family phenazine biosynthesis protein;protein_id=WP_021158540.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 59037 59495 . - . ID=gene-LDO49_RS05575;Name=LDO49_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05575;old_locus_tag=BCEP4_1250066 NZ_CAJZAV010000030.1 Protein Homology CDS 59037 59495 . - 0 ID=cds-WP_006478174.1;Parent=gene-LDO49_RS05575;Dbxref=GenBank:WP_006478174.1;Name=WP_006478174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398680.1;locus_tag=LDO49_RS05575;product=RidA family protein;protein_id=WP_006478174.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 59538 60719 . - . ID=gene-LDO49_RS05580;Name=LDO49_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05580;old_locus_tag=BCEP4_1250067 NZ_CAJZAV010000030.1 Protein Homology CDS 59538 60719 . - 0 ID=cds-WP_048025387.1;Parent=gene-LDO49_RS05580;Dbxref=GenBank:WP_048025387.1;Name=WP_048025387.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522482.1;locus_tag=LDO49_RS05580;product=aminotransferase-like domain-containing protein;protein_id=WP_048025387.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq gene 60872 61780 . - . ID=gene-LDO49_RS05585;Name=LDO49_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05585;old_locus_tag=BCEP4_1250068 NZ_CAJZAV010000030.1 Protein Homology CDS 60872 61780 . - 0 ID=cds-WP_021158543.1;Parent=gene-LDO49_RS05585;Dbxref=GenBank:WP_021158543.1;Name=WP_021158543.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896405.1;locus_tag=LDO49_RS05585;product=DMT family transporter;protein_id=WP_021158543.1;transl_table=11 NZ_CAJZAV010000030.1 RefSeq pseudogene 61836 61958 . - . ID=gene-LDO49_RS05590;Name=LDO49_RS05590;end_range=61958,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS05590;partial=true;pseudo=true NZ_CAJZAV010000030.1 Protein Homology CDS 61836 61958 . - 0 ID=cds-LDO49_RS05590;Parent=gene-LDO49_RS05590;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=61958,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723424.1;locus_tag=LDO49_RS05590;partial=true;product=VOC family protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000031.1 1 24455 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000031.1 RefSeq region 1 24455 . + . ID=NZ_CAJZAV010000031.1:1..24455;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_126 NZ_CAJZAV010000031.1 RefSeq gene 277 2136 . - . ID=gene-LDO49_RS05595;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=LDO49_RS05595;old_locus_tag=BCEP4_1260001 NZ_CAJZAV010000031.1 Protein Homology CDS 277 2136 . - 0 ID=cds-WP_042972837.1;Parent=gene-LDO49_RS05595;Dbxref=GenBank:WP_042972837.1;Name=WP_042972837.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013952014.1;locus_tag=LDO49_RS05595;product=dihydroxy-acid dehydratase;protein_id=WP_042972837.1;transl_table=11 NZ_CAJZAV010000031.1 RefSeq gene 2421 3443 . - . ID=gene-LDO49_RS05600;Name=LDO49_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05600;old_locus_tag=BCEP4_1260002 NZ_CAJZAV010000031.1 Protein Homology CDS 2421 3443 . - 0 ID=cds-WP_175924939.1;Parent=gene-LDO49_RS05600;Dbxref=GenBank:WP_175924939.1;Name=WP_175924939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495060.1;locus_tag=LDO49_RS05600;product=Ldh family oxidoreductase;protein_id=WP_175924939.1;transl_table=11 NZ_CAJZAV010000031.1 RefSeq gene 3436 5028 . - . ID=gene-LDO49_RS05605;Name=LDO49_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05605;old_locus_tag=BCEP4_1260003 NZ_CAJZAV010000031.1 Protein Homology CDS 3436 5028 . - 0 ID=cds-WP_224051501.1;Parent=gene-LDO49_RS05605;Dbxref=GenBank:WP_224051501.1;Name=WP_224051501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754884.1;locus_tag=LDO49_RS05605;product=aldehyde dehydrogenase (NADP(+));protein_id=WP_224051501.1;transl_table=11 NZ_CAJZAV010000031.1 RefSeq gene 5104 6729 . - . ID=gene-LDO49_RS05610;Name=LDO49_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05610;old_locus_tag=BCEP4_1260004 NZ_CAJZAV010000031.1 Protein Homology CDS 5104 6729 . - 0 ID=cds-WP_059552470.1;Parent=gene-LDO49_RS05610;Dbxref=GenBank:WP_059552470.1;Name=WP_059552470.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603558.1;locus_tag=LDO49_RS05610;product=APC family permease;protein_id=WP_059552470.1;transl_table=11 NZ_CAJZAV010000031.1 RefSeq gene 6963 7883 . - . ID=gene-LDO49_RS05615;Name=LDO49_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05615;old_locus_tag=BCEP4_1260005 NZ_CAJZAV010000031.1 Protein Homology CDS 6963 7883 . - 0 ID=cds-WP_011547925.1;Parent=gene-LDO49_RS05615;Dbxref=GenBank:WP_011547925.1;Name=WP_011547925.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547925.1;locus_tag=LDO49_RS05615;product=dihydrodipicolinate synthase family protein;protein_id=WP_011547925.1;transl_table=11 NZ_CAJZAV010000031.1 RefSeq gene 8135 9067 . + . ID=gene-LDO49_RS05620;Name=LDO49_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05620;old_locus_tag=BCEP4_1260006 NZ_CAJZAV010000031.1 Protein Homology CDS 8135 9067 . + 0 ID=cds-WP_224051505.1;Parent=gene-LDO49_RS05620;Dbxref=GenBank:WP_224051505.1;Name=WP_224051505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028984.1;locus_tag=LDO49_RS05620;product=4-hydroxyproline epimerase;protein_id=WP_224051505.1;transl_table=11 NZ_CAJZAV010000031.1 RefSeq pseudogene 9064 10098 . + . ID=gene-LDO49_RS05625;Name=LDO49_RS05625;end_range=10098,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS05625;old_locus_tag=BCEP4_1260007;partial=true;pseudo=true NZ_CAJZAV010000031.1 Protein Homology CDS 9064 10098 . + 0 ID=cds-LDO49_RS05625;Parent=gene-LDO49_RS05625;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016491,GO:0050660;end_range=10098,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523446.1;locus_tag=LDO49_RS05625;partial=true;product=NAD(P)/FAD-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_CAJZAV010000031.1 RefSeq pseudogene 10105 10506 . + . ID=gene-LDO49_RS37480;Name=LDO49_RS37480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37480;partial=true;pseudo=true;start_range=.,10105 NZ_CAJZAV010000031.1 Protein Homology CDS 10105 10506 . + 0 ID=cds-LDO49_RS37480;Parent=gene-LDO49_RS37480;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0009116,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: protein motif:HMM:NF013232.6;locus_tag=LDO49_RS37480;partial=true;product=phosphorylase family protein;pseudo=true;start_range=.,10105;transl_table=11 NZ_CAJZAV010000031.1 RefSeq gene 10645 11604 . - . ID=gene-LDO49_RS05630;Name=LDO49_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05630;old_locus_tag=BCEP4_1260008 NZ_CAJZAV010000031.1 Protein Homology CDS 10645 11604 . - 0 ID=cds-WP_224051503.1;Parent=gene-LDO49_RS05630;Dbxref=GenBank:WP_224051503.1;Name=WP_224051503.1;Ontology_term=GO:0120010,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=intermembrane phospholipid transfer|0120010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760603.1;locus_tag=LDO49_RS05630;product=MlaA family lipoprotein;protein_id=WP_224051503.1;transl_table=11 NZ_CAJZAV010000031.1 RefSeq gene 11597 14230 . - . ID=gene-LDO49_RS05635;Name=LDO49_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05635;old_locus_tag=BCEP4_1260009 NZ_CAJZAV010000031.1 Protein Homology CDS 11597 14230 . - 0 ID=cds-WP_048023923.1;Parent=gene-LDO49_RS05635;Dbxref=GenBank:WP_048023923.1;Name=WP_048023923.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330923.1;locus_tag=LDO49_RS05635;product=MMPL family transporter;protein_id=WP_048023923.1;transl_table=11 NZ_CAJZAV010000031.1 RefSeq gene 14554 15150 . + . ID=gene-LDO49_RS05640;Name=LDO49_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05640;old_locus_tag=BCEP4_1260011 NZ_CAJZAV010000031.1 Protein Homology CDS 14554 15150 . + 0 ID=cds-WP_021161402.1;Parent=gene-LDO49_RS05640;Dbxref=GenBank:WP_021161402.1;Name=WP_021161402.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894421.1;locus_tag=LDO49_RS05640;product=MlaC/ttg2D family ABC transporter substrate-binding protein;protein_id=WP_021161402.1;transl_table=11 NZ_CAJZAV010000031.1 RefSeq pseudogene 15232 15759 . - . ID=gene-LDO49_RS05645;Name=LDO49_RS05645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS05645;pseudo=true NZ_CAJZAV010000031.1 Protein Homology CDS 15232 15759 . - 0 ID=cds-LDO49_RS05645;Parent=gene-LDO49_RS05645;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006387695.1;locus_tag=LDO49_RS05645;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CAJZAV010000031.1 RefSeq gene 15746 16390 . - . ID=gene-LDO49_RS05650;Name=LDO49_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05650;old_locus_tag=BCEP4_1260014 NZ_CAJZAV010000031.1 Protein Homology CDS 15746 16390 . - 0 ID=cds-WP_042976314.1;Parent=gene-LDO49_RS05650;Dbxref=GenBank:WP_042976314.1;Name=WP_042976314.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367145.1;locus_tag=LDO49_RS05650;product=response regulator;protein_id=WP_042976314.1;transl_table=11 NZ_CAJZAV010000031.1 RefSeq gene 16420 17805 . - . ID=gene-LDO49_RS05655;Name=LDO49_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05655;old_locus_tag=BCEP4_1260015 NZ_CAJZAV010000031.1 Protein Homology CDS 16420 17805 . - 0 ID=cds-WP_059812158.1;Parent=gene-LDO49_RS05655;Dbxref=GenBank:WP_059812158.1;Name=WP_059812158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353643.1;locus_tag=LDO49_RS05655;product=cache domain-containing protein;protein_id=WP_059812158.1;transl_table=11 NZ_CAJZAV010000031.1 RefSeq gene 17953 19515 . - . ID=gene-LDO49_RS05660;Name=LDO49_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05660;old_locus_tag=BCEP4_1260016 NZ_CAJZAV010000031.1 Protein Homology CDS 17953 19515 . - 0 ID=cds-WP_059651477.1;Parent=gene-LDO49_RS05660;Dbxref=GenBank:WP_059651477.1;Name=WP_059651477.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367143.1;locus_tag=LDO49_RS05660;product=sensor domain-containing diguanylate cyclase;protein_id=WP_059651477.1;transl_table=11 NZ_CAJZAV010000031.1 RefSeq gene 19800 20051 . - . ID=gene-LDO49_RS05665;Name=LDO49_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05665 NZ_CAJZAV010000031.1 GeneMarkS-2+ CDS 19800 20051 . - 0 ID=cds-WP_224051504.1;Parent=gene-LDO49_RS05665;Dbxref=GenBank:WP_224051504.1;Name=WP_224051504.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS05665;product=hypothetical protein;protein_id=WP_224051504.1;transl_table=11 NZ_CAJZAV010000031.1 RefSeq gene 20093 22267 . - . ID=gene-LDO49_RS05670;Name=LDO49_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05670;old_locus_tag=BCEP4_1260017 NZ_CAJZAV010000031.1 Protein Homology CDS 20093 22267 . - 0 ID=cds-WP_060074537.1;Parent=gene-LDO49_RS05670;Dbxref=GenBank:WP_060074537.1;Name=WP_060074537.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330928.1;locus_tag=LDO49_RS05670;product=malate synthase G;protein_id=WP_060074537.1;transl_table=11 NZ_CAJZAV010000031.1 RefSeq gene 22310 22714 . - . ID=gene-LDO49_RS05675;Name=LDO49_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05675;old_locus_tag=BCEP4_1260018 NZ_CAJZAV010000031.1 Protein Homology CDS 22310 22714 . - 0 ID=cds-WP_060074536.1;Parent=gene-LDO49_RS05675;Dbxref=GenBank:WP_060074536.1;Name=WP_060074536.1;Ontology_term=GO:0020037;gbkey=CDS;go_function=heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012405796.1;locus_tag=LDO49_RS05675;product=GlcG/HbpS family heme-binding protein;protein_id=WP_060074536.1;transl_table=11 NZ_CAJZAV010000031.1 RefSeq gene 22735 23955 . - . ID=gene-LDO49_RS05680;Name=glcF;gbkey=Gene;gene=glcF;gene_biotype=protein_coding;locus_tag=LDO49_RS05680;old_locus_tag=BCEP4_1260019 NZ_CAJZAV010000031.1 Protein Homology CDS 22735 23955 . - 0 ID=cds-WP_060074535.1;Parent=gene-LDO49_RS05680;Dbxref=GenBank:WP_060074535.1;Name=WP_060074535.1;Ontology_term=GO:0051536;gbkey=CDS;gene=glcF;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659880.1;locus_tag=LDO49_RS05680;product=glycolate oxidase subunit GlcF;protein_id=WP_060074535.1;transl_table=11 NZ_CAJZAV010000031.1 RefSeq pseudogene 23980 24455 . - . ID=gene-LDO49_RS05685;Name=glcE;end_range=24455,.;gbkey=Gene;gene=glcE;gene_biotype=pseudogene;locus_tag=LDO49_RS05685;old_locus_tag=BCEP4_1260020;partial=true;pseudo=true NZ_CAJZAV010000031.1 Protein Homology CDS 23980 24455 . - 2 ID=cds-LDO49_RS05685;Parent=gene-LDO49_RS05685;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=24455,.;gbkey=CDS;gene=glcE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353648.1;locus_tag=LDO49_RS05685;partial=true;product=glycolate oxidase subunit GlcE;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000032.1 1 644 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000032.1 RefSeq region 1 644 . + . ID=NZ_CAJZAV010000032.1:1..644;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_127 NZ_CAJZAV010000032.1 RefSeq gene 1 322 . - . ID=gene-LDO49_RS37265;Name=LDO49_RS37265;end_range=322,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37265;partial=true;start_range=.,1 NZ_CAJZAV010000032.1 GeneMarkS-2+ CDS 1 322 . - 0 ID=cds-WP_443797913.1;Parent=gene-LDO49_RS37265;Dbxref=GenBank:WP_443797913.1;Name=WP_443797913.1;end_range=322,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37265;partial=true;product=hypothetical protein;protein_id=WP_443797913.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000032.1 RefSeq gene 333 630 . - . ID=gene-LDO49_RS37810;Name=LDO49_RS37810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37810;partial=true;start_range=.,333 NZ_CAJZAV010000032.1 GeneMarkS-2+ CDS 333 630 . - 0 ID=cds-WP_443797914.1;Parent=gene-LDO49_RS37810;Dbxref=GenBank:WP_443797914.1;Name=WP_443797914.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37810;partial=true;product=hypothetical protein;protein_id=WP_443797914.1;start_range=.,333;transl_table=11 ##sequence-region NZ_CAJZAV010000033.1 1 21988 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000033.1 RefSeq region 1 21988 . + . ID=NZ_CAJZAV010000033.1:1..21988;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_128 NZ_CAJZAV010000033.1 RefSeq pseudogene 1 227 . - . ID=gene-LDO49_RS05695;Name=LDO49_RS05695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS05695;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000033.1 Protein Homology CDS 1 227 . - 0 ID=cds-LDO49_RS05695;Parent=gene-LDO49_RS05695;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493148.1;locus_tag=LDO49_RS05695;partial=true;product=collagen-like triple helix repeat-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000033.1 RefSeq gene 587 985 . + . ID=gene-LDO49_RS05700;Name=LDO49_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05700;old_locus_tag=BCEP4_1280002 NZ_CAJZAV010000033.1 Protein Homology CDS 587 985 . + 0 ID=cds-WP_059589544.1;Parent=gene-LDO49_RS05700;Dbxref=GenBank:WP_059589544.1;Name=WP_059589544.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255591.1;locus_tag=LDO49_RS05700;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_059589544.1;transl_table=11 NZ_CAJZAV010000033.1 RefSeq gene 1058 2044 . - . ID=gene-LDO49_RS05705;Name=LDO49_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05705;old_locus_tag=BCEP4_1280003 NZ_CAJZAV010000033.1 Protein Homology CDS 1058 2044 . - 0 ID=cds-WP_060073652.1;Parent=gene-LDO49_RS05705;Dbxref=GenBank:WP_060073652.1;Name=WP_060073652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365449.1;locus_tag=LDO49_RS05705;product=alpha/beta fold hydrolase;protein_id=WP_060073652.1;transl_table=11 NZ_CAJZAV010000033.1 RefSeq gene 2052 3617 . - . ID=gene-LDO49_RS05710;Name=LDO49_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05710;old_locus_tag=BCEP4_1280004 NZ_CAJZAV010000033.1 Protein Homology CDS 2052 3617 . - 0 ID=cds-WP_060073650.1;Parent=gene-LDO49_RS05710;Dbxref=GenBank:WP_060073650.1;Name=WP_060073650.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217562.1;locus_tag=LDO49_RS05710;product=flavin-containing monooxygenase;protein_id=WP_060073650.1;transl_table=11 NZ_CAJZAV010000033.1 RefSeq gene 3614 4516 . - . ID=gene-LDO49_RS05715;Name=LDO49_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05715;old_locus_tag=BCEP4_1280005 NZ_CAJZAV010000033.1 Protein Homology CDS 3614 4516 . - 0 ID=cds-WP_021163138.1;Parent=gene-LDO49_RS05715;Dbxref=GenBank:WP_021163138.1;Name=WP_021163138.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529196.1;locus_tag=LDO49_RS05715;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_021163138.1;transl_table=11 NZ_CAJZAV010000033.1 RefSeq gene 4620 5261 . + . ID=gene-LDO49_RS05720;Name=LDO49_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05720;old_locus_tag=BCEP4_1280006 NZ_CAJZAV010000033.1 Protein Homology CDS 4620 5261 . + 0 ID=cds-WP_224051506.1;Parent=gene-LDO49_RS05720;Dbxref=GenBank:WP_224051506.1;Name=WP_224051506.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467800.1;locus_tag=LDO49_RS05720;product=TetR/AcrR family transcriptional regulator;protein_id=WP_224051506.1;transl_table=11 NZ_CAJZAV010000033.1 RefSeq gene 5928 6830 . - . ID=gene-LDO49_RS05725;Name=LDO49_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05725;old_locus_tag=BCEP4_1280007 NZ_CAJZAV010000033.1 Protein Homology CDS 5928 6830 . - 0 ID=cds-WP_059589599.1;Parent=gene-LDO49_RS05725;Dbxref=GenBank:WP_059589599.1;Name=WP_059589599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014193482.1;locus_tag=LDO49_RS05725;product=LysR substrate-binding domain-containing protein;protein_id=WP_059589599.1;transl_table=11 NZ_CAJZAV010000033.1 RefSeq gene 6972 7099 . - . ID=gene-LDO49_RS05730;Name=LDO49_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05730;partial=true;start_range=.,6972 NZ_CAJZAV010000033.1 Protein Homology CDS 6972 7099 . - 0 ID=cds-WP_224051508.1;Parent=gene-LDO49_RS05730;Dbxref=GenBank:WP_224051508.1;Name=WP_224051508.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013235792.1;locus_tag=LDO49_RS05730;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_224051508.1;start_range=.,6972;transl_table=11 NZ_CAJZAV010000033.1 RefSeq gene 7141 7797 . - . ID=gene-LDO49_RS05735;Name=LDO49_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05735;old_locus_tag=BCEP4_1280009 NZ_CAJZAV010000033.1 Protein Homology CDS 7141 7797 . - 0 ID=cds-WP_021162904.1;Parent=gene-LDO49_RS05735;Dbxref=GenBank:WP_021162904.1;Name=WP_021162904.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013091586.1;locus_tag=LDO49_RS05735;product=amino acid ABC transporter permease;protein_id=WP_021162904.1;transl_table=11 NZ_CAJZAV010000033.1 RefSeq gene 7794 8558 . - . ID=gene-LDO49_RS05740;Name=LDO49_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05740;old_locus_tag=BCEP4_1280010 NZ_CAJZAV010000033.1 Protein Homology CDS 7794 8558 . - 0 ID=cds-WP_048022465.1;Parent=gene-LDO49_RS05740;Dbxref=GenBank:WP_048022465.1;Name=WP_048022465.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349407.1;locus_tag=LDO49_RS05740;product=amino acid ABC transporter permease;protein_id=WP_048022465.1;transl_table=11 NZ_CAJZAV010000033.1 RefSeq gene 8602 9420 . - . ID=gene-LDO49_RS05745;Name=LDO49_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05745;old_locus_tag=BCEP4_1280011 NZ_CAJZAV010000033.1 Protein Homology CDS 8602 9420 . - 0 ID=cds-WP_059493708.1;Parent=gene-LDO49_RS05745;Dbxref=GenBank:WP_059493708.1;Name=WP_059493708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011491619.1;locus_tag=LDO49_RS05745;product=transporter substrate-binding domain-containing protein;protein_id=WP_059493708.1;transl_table=11 NZ_CAJZAV010000033.1 RefSeq gene 9461 10534 . - . ID=gene-LDO49_RS05750;Name=LDO49_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05750;old_locus_tag=BCEP4_1280012 NZ_CAJZAV010000033.1 Protein Homology CDS 9461 10534 . - 0 ID=cds-WP_021162907.1;Parent=gene-LDO49_RS05750;Dbxref=GenBank:WP_021162907.1;Name=WP_021162907.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018433176.1;locus_tag=LDO49_RS05750;product=ABC transporter ATP-binding protein;protein_id=WP_021162907.1;transl_table=11 NZ_CAJZAV010000033.1 RefSeq gene 10575 11417 . - . ID=gene-LDO49_RS05755;Name=LDO49_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05755;old_locus_tag=BCEP4_1280013 NZ_CAJZAV010000033.1 Protein Homology CDS 10575 11417 . - 0 ID=cds-WP_060071185.1;Parent=gene-LDO49_RS05755;Dbxref=GenBank:WP_060071185.1;Name=WP_060071185.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349410.1;locus_tag=LDO49_RS05755;product=ABC transporter permease;protein_id=WP_060071185.1;transl_table=11 NZ_CAJZAV010000033.1 RefSeq gene 11414 12337 . - . ID=gene-LDO49_RS05760;Name=LDO49_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05760;old_locus_tag=BCEP4_1280014 NZ_CAJZAV010000033.1 Protein Homology CDS 11414 12337 . - 0 ID=cds-WP_027790891.1;Parent=gene-LDO49_RS05760;Dbxref=GenBank:WP_027790891.1;Name=WP_027790891.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349411.1;locus_tag=LDO49_RS05760;product=ABC transporter permease;protein_id=WP_027790891.1;transl_table=11 NZ_CAJZAV010000033.1 RefSeq gene 12342 13439 . - . ID=gene-LDO49_RS05765;Name=LDO49_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05765;old_locus_tag=BCEP4_1280015 NZ_CAJZAV010000033.1 Protein Homology CDS 12342 13439 . - 0 ID=cds-WP_048245295.1;Parent=gene-LDO49_RS05765;Dbxref=GenBank:WP_048245295.1;Name=WP_048245295.1;Ontology_term=GO:0015846,GO:0019808,GO:0042626,GO:0140359,GO:0042597,GO:0055052;gbkey=CDS;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014193474.1;locus_tag=LDO49_RS05765;product=ABC transporter substrate-binding protein;protein_id=WP_048245295.1;transl_table=11 NZ_CAJZAV010000033.1 RefSeq gene 13590 15062 . - . ID=gene-LDO49_RS05770;Name=LDO49_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05770;old_locus_tag=BCEP4_1280016 NZ_CAJZAV010000033.1 Protein Homology CDS 13590 15062 . - 0 ID=cds-WP_060071188.1;Parent=gene-LDO49_RS05770;Dbxref=GenBank:WP_060071188.1;Name=WP_060071188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349413.1;locus_tag=LDO49_RS05770;product=aldehyde dehydrogenase family protein;protein_id=WP_060071188.1;transl_table=11 NZ_CAJZAV010000033.1 RefSeq gene 15059 16753 . - . ID=gene-LDO49_RS05775;Name=LDO49_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05775;old_locus_tag=BCEP4_1280017 NZ_CAJZAV010000033.1 Protein Homology CDS 15059 16753 . - 0 ID=cds-WP_081067219.1;Parent=gene-LDO49_RS05775;Dbxref=GenBank:WP_081067219.1;Name=WP_081067219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349414.1;locus_tag=LDO49_RS05775;product=5-guanidino-2-oxopentanoate decarboxylase;protein_id=WP_081067219.1;transl_table=11 NZ_CAJZAV010000033.1 RefSeq gene 16984 17919 . - . ID=gene-LDO49_RS05780;Name=LDO49_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05780;old_locus_tag=BCEP4_1280018 NZ_CAJZAV010000033.1 Protein Homology CDS 16984 17919 . - 0 ID=cds-WP_060071191.1;Parent=gene-LDO49_RS05780;Dbxref=GenBank:WP_060071191.1;Name=WP_060071191.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217559.1;locus_tag=LDO49_RS05780;product=LysR family transcriptional regulator;protein_id=WP_060071191.1;transl_table=11 NZ_CAJZAV010000033.1 RefSeq gene 18047 18691 . + . ID=gene-LDO49_RS05785;Name=LDO49_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05785;old_locus_tag=BCEP4_1280019 NZ_CAJZAV010000033.1 Protein Homology CDS 18047 18691 . + 0 ID=cds-WP_021164120.1;Parent=gene-LDO49_RS05785;Dbxref=GenBank:WP_021164120.1;Name=WP_021164120.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900235.1;locus_tag=LDO49_RS05785;product=glutathione S-transferase family protein;protein_id=WP_021164120.1;transl_table=11 NZ_CAJZAV010000033.1 RefSeq gene 18728 19774 . + . ID=gene-LDO49_RS37815;Name=LDO49_RS37815;end_range=19774,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37815;old_locus_tag=BCEP4_1280020;partial=true NZ_CAJZAV010000033.1 Protein Homology CDS 18728 19774 . + 0 ID=cds-WP_443797915.1;Parent=gene-LDO49_RS37815;Dbxref=GenBank:WP_443797915.1;Name=WP_443797915.1;end_range=19774,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548331.1;locus_tag=LDO49_RS37815;partial=true;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_443797915.1;transl_table=11 NZ_CAJZAV010000033.1 RefSeq gene 19785 20898 . + . ID=gene-LDO49_RS37490;Name=LDO49_RS37490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37490;old_locus_tag=BCEP4_1280021;partial=true;start_range=.,19785 NZ_CAJZAV010000033.1 Protein Homology CDS 19785 20898 . + 1 ID=cds-WP_372585829.1;Parent=gene-LDO49_RS37490;Dbxref=GenBank:WP_372585829.1;Name=WP_372585829.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548331.1;locus_tag=LDO49_RS37490;partial=true;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_372585829.1;start_range=.,19785;transl_table=11 NZ_CAJZAV010000033.1 RefSeq gene 21022 21225 . + . ID=gene-LDO49_RS05795;Name=LDO49_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05795;old_locus_tag=BCEP4_1280022 NZ_CAJZAV010000033.1 Protein Homology CDS 21022 21225 . + 0 ID=cds-WP_059484177.1;Parent=gene-LDO49_RS05795;Dbxref=GenBank:WP_059484177.1;Name=WP_059484177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900233.1;locus_tag=LDO49_RS05795;product=DUF2970 domain-containing protein;protein_id=WP_059484177.1;transl_table=11 ##sequence-region NZ_CAJZAV010000034.1 1 12889 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000034.1 RefSeq region 1 12889 . + . ID=NZ_CAJZAV010000034.1:1..12889;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_129 NZ_CAJZAV010000034.1 RefSeq gene 138 1058 . - . ID=gene-LDO49_RS05800;Name=LDO49_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05800;old_locus_tag=BCEP4_1290001;partial=true;start_range=.,138 NZ_CAJZAV010000034.1 Protein Homology CDS 138 1058 . - 0 ID=cds-WP_443797916.1;Parent=gene-LDO49_RS05800;Dbxref=GenBank:WP_443797916.1;Name=WP_443797916.1;Ontology_term=GO:0042834,GO:0005886,GO:0044096;gbkey=CDS;go_component=plasma membrane|0005886||IEA,type IV pilus|0044096||IEA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881758.1;locus_tag=LDO49_RS05800;partial=true;product=type IV pilus assembly protein FimV;protein_id=WP_443797916.1;start_range=.,138;transl_table=11 NZ_CAJZAV010000034.1 RefSeq gene 1680 1865 . - . ID=gene-LDO49_RS05805;Name=LDO49_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05805 NZ_CAJZAV010000034.1 GeneMarkS-2+ CDS 1680 1865 . - 0 ID=cds-WP_124474999.1;Parent=gene-LDO49_RS05805;Dbxref=GenBank:WP_124474999.1;Name=WP_124474999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS05805;product=hypothetical protein;protein_id=WP_124474999.1;transl_table=11 NZ_CAJZAV010000034.1 RefSeq gene 1904 3148 . + . ID=gene-LDO49_RS05810;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=LDO49_RS05810;old_locus_tag=BCEP4_1290002 NZ_CAJZAV010000034.1 Protein Homology CDS 1904 3148 . + 0 ID=cds-WP_048022078.1;Parent=gene-LDO49_RS05810;Dbxref=GenBank:WP_048022078.1;Name=WP_048022078.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495951.1;locus_tag=LDO49_RS05810;product=flagellar hook protein FlgE;protein_id=WP_048022078.1;transl_table=11 NZ_CAJZAV010000034.1 RefSeq gene 3254 4375 . - . ID=gene-LDO49_RS05815;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=LDO49_RS05815;old_locus_tag=BCEP4_1290003 NZ_CAJZAV010000034.1 Protein Homology CDS 3254 4375 . - 0 ID=cds-WP_027791140.1;Parent=gene-LDO49_RS05815;Dbxref=GenBank:WP_027791140.1;Name=WP_027791140.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338485.1;locus_tag=LDO49_RS05815;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_027791140.1;transl_table=11 NZ_CAJZAV010000034.1 RefSeq gene 4457 4576 . - . ID=gene-LDO49_RS05820;Name=LDO49_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05820 NZ_CAJZAV010000034.1 Protein Homology CDS 4457 4576 . - 0 ID=cds-WP_021158720.1;Parent=gene-LDO49_RS05820;Dbxref=GenBank:WP_021158720.1;Name=WP_021158720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329997.1;locus_tag=LDO49_RS05820;product=hypothetical protein;protein_id=WP_021158720.1;transl_table=11 NZ_CAJZAV010000034.1 RefSeq gene 4679 5746 . - . ID=gene-LDO49_RS05825;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=LDO49_RS05825;old_locus_tag=BCEP4_1290004 NZ_CAJZAV010000034.1 Protein Homology CDS 4679 5746 . - 0 ID=cds-WP_021158719.1;Parent=gene-LDO49_RS05825;Dbxref=GenBank:WP_021158719.1;Name=WP_021158719.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725192.1;locus_tag=LDO49_RS05825;product=3-isopropylmalate dehydrogenase;protein_id=WP_021158719.1;transl_table=11 NZ_CAJZAV010000034.1 RefSeq gene 5823 6473 . - . ID=gene-LDO49_RS05830;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=LDO49_RS05830;old_locus_tag=BCEP4_1290005 NZ_CAJZAV010000034.1 Protein Homology CDS 5823 6473 . - 0 ID=cds-WP_021158718.1;Parent=gene-LDO49_RS05830;Dbxref=GenBank:WP_021158718.1;Name=WP_021158718.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099619.1;locus_tag=LDO49_RS05830;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_021158718.1;transl_table=11 NZ_CAJZAV010000034.1 RefSeq gene 6542 6688 . - . ID=gene-LDO49_RS05835;Name=LDO49_RS05835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05835;old_locus_tag=BCEP4_1290006 NZ_CAJZAV010000034.1 Protein Homology CDS 6542 6688 . - 0 ID=cds-WP_021158717.1;Parent=gene-LDO49_RS05835;Dbxref=GenBank:WP_021158717.1;Name=WP_021158717.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399579.1;locus_tag=LDO49_RS05835;product=entericidin A/B family lipoprotein;protein_id=WP_021158717.1;transl_table=11 NZ_CAJZAV010000034.1 RefSeq gene 6692 8101 . - . ID=gene-LDO49_RS05840;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=LDO49_RS05840;old_locus_tag=BCEP4_1290007 NZ_CAJZAV010000034.1 Protein Homology CDS 6692 8101 . - 0 ID=cds-WP_021158716.1;Parent=gene-LDO49_RS05840;Dbxref=GenBank:WP_021158716.1;Name=WP_021158716.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690586.1;locus_tag=LDO49_RS05840;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_021158716.1;transl_table=11 NZ_CAJZAV010000034.1 RefSeq gene 8306 8482 . - . ID=gene-LDO49_RS37820;Name=LDO49_RS37820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37820;old_locus_tag=BCEP4_1290008 NZ_CAJZAV010000034.1 GeneMarkS-2+ CDS 8306 8482 . - 0 ID=cds-WP_443797917.1;Parent=gene-LDO49_RS37820;Dbxref=GenBank:WP_443797917.1;Name=WP_443797917.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37820;product=hypothetical protein;protein_id=WP_443797917.1;transl_table=11 NZ_CAJZAV010000034.1 RefSeq gene 8539 9300 . - . ID=gene-LDO49_RS05845;Name=LDO49_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05845;old_locus_tag=BCEP4_1290009 NZ_CAJZAV010000034.1 Protein Homology CDS 8539 9300 . - 0 ID=cds-WP_060071510.1;Parent=gene-LDO49_RS05845;Dbxref=GenBank:WP_060071510.1;Name=WP_060071510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416378.1;locus_tag=LDO49_RS05845;product=hypothetical protein;protein_id=WP_060071510.1;transl_table=11 NZ_CAJZAV010000034.1 RefSeq gene 9331 10152 . - . ID=gene-LDO49_RS05850;Name=LDO49_RS05850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05850;old_locus_tag=BCEP4_1290010 NZ_CAJZAV010000034.1 Protein Homology CDS 9331 10152 . - 0 ID=cds-WP_042974240.1;Parent=gene-LDO49_RS05850;Dbxref=GenBank:WP_042974240.1;Name=WP_042974240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217306.1;locus_tag=LDO49_RS05850;product=hypothetical protein;protein_id=WP_042974240.1;transl_table=11 NZ_CAJZAV010000034.1 RefSeq gene 10542 10865 . + . ID=gene-LDO49_RS05855;Name=LDO49_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05855;old_locus_tag=BCEP4_1290011 NZ_CAJZAV010000034.1 Protein Homology CDS 10542 10865 . + 0 ID=cds-WP_060071508.1;Parent=gene-LDO49_RS05855;Dbxref=GenBank:WP_060071508.1;Name=WP_060071508.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487734.1;locus_tag=LDO49_RS05855;product=cupin domain-containing protein;protein_id=WP_060071508.1;transl_table=11 NZ_CAJZAV010000034.1 RefSeq gene 10998 11723 . + . ID=gene-LDO49_RS05860;Name=LDO49_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05860;old_locus_tag=BCEP4_1290012 NZ_CAJZAV010000034.1 Protein Homology CDS 10998 11723 . + 0 ID=cds-WP_060071452.1;Parent=gene-LDO49_RS05860;Dbxref=GenBank:WP_060071452.1;Name=WP_060071452.1;Ontology_term=GO:0006749,GO:0043295;gbkey=CDS;go_function=glutathione binding|0043295||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754093.1;locus_tag=LDO49_RS05860;product=glutathione S-transferase;protein_id=WP_060071452.1;transl_table=11 NZ_CAJZAV010000034.1 RefSeq gene 11773 12171 . - . ID=gene-LDO49_RS05865;Name=LDO49_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05865;old_locus_tag=BCEP4_1290013 NZ_CAJZAV010000034.1 Protein Homology CDS 11773 12171 . - 0 ID=cds-WP_021158714.1;Parent=gene-LDO49_RS05865;Dbxref=GenBank:WP_021158714.1;Name=WP_021158714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525237.1;locus_tag=LDO49_RS05865;product=hypothetical protein;protein_id=WP_021158714.1;transl_table=11 NZ_CAJZAV010000034.1 RefSeq gene 12187 12889 . - . ID=gene-LDO49_RS05870;Name=LDO49_RS05870;end_range=12889,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05870;old_locus_tag=BCEP4_1290014;partial=true NZ_CAJZAV010000034.1 Protein Homology CDS 12187 12889 . - 1 ID=cds-WP_224051510.1;Parent=gene-LDO49_RS05870;Dbxref=GenBank:WP_224051510.1;Name=WP_224051510.1;Ontology_term=GO:0055085,GO:0022857;end_range=12889,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355733.1;locus_tag=LDO49_RS05870;partial=true;product=MFS transporter;protein_id=WP_224051510.1;transl_table=11 ##sequence-region NZ_CAJZAV010000035.1 1 143151 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000035.1 RefSeq region 1 143151 . + . ID=NZ_CAJZAV010000035.1:1..143151;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_13 NZ_CAJZAV010000035.1 RefSeq gene 1 286 . - . ID=gene-LDO49_RS05875;Name=LDO49_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05875;partial=true;start_range=.,1 NZ_CAJZAV010000035.1 Protein Homology CDS 1 286 . - 0 ID=cds-WP_224051511.1;Parent=gene-LDO49_RS05875;Dbxref=GenBank:WP_224051511.1;Name=WP_224051511.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763200.1;locus_tag=LDO49_RS05875;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_224051511.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 318 623 . + . ID=gene-LDO49_RS05880;Name=LDO49_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05880 NZ_CAJZAV010000035.1 GeneMarkS-2+ CDS 318 623 . + 0 ID=cds-WP_224051512.1;Parent=gene-LDO49_RS05880;Dbxref=GenBank:WP_224051512.1;Name=WP_224051512.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS05880;product=hypothetical protein;protein_id=WP_224051512.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 798 1265 . - . ID=gene-LDO49_RS05885;Name=LDO49_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05885;old_locus_tag=BCEP4_130002 NZ_CAJZAV010000035.1 Protein Homology CDS 798 1265 . - 0 ID=cds-WP_124843625.1;Parent=gene-LDO49_RS05885;Dbxref=GenBank:WP_124843625.1;Name=WP_124843625.1;Ontology_term=GO:0009116,GO:0008270,GO:0019239;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,deaminase activity|0019239||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356404.1;locus_tag=LDO49_RS05885;product=nucleoside deaminase;protein_id=WP_124843625.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 1376 1846 . - . ID=gene-LDO49_RS05890;Name=cynS;gbkey=Gene;gene=cynS;gene_biotype=protein_coding;locus_tag=LDO49_RS05890;old_locus_tag=BCEP4_130003 NZ_CAJZAV010000035.1 Protein Homology CDS 1376 1846 . - 0 ID=cds-WP_021160503.1;Parent=gene-LDO49_RS05890;Dbxref=GenBank:WP_021160503.1;Name=WP_021160503.1;Ontology_term=GO:0006082,GO:0008824;gbkey=CDS;gene=cynS;go_function=cyanate hydratase activity|0008824||IEA;go_process=organic acid metabolic process|0006082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020204195.1;locus_tag=LDO49_RS05890;product=cyanase;protein_id=WP_021160503.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 1877 2536 . - . ID=gene-LDO49_RS05895;Name=LDO49_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05895;old_locus_tag=BCEP4_130004 NZ_CAJZAV010000035.1 Protein Homology CDS 1877 2536 . - 0 ID=cds-WP_224051513.1;Parent=gene-LDO49_RS05895;Dbxref=GenBank:WP_224051513.1;Name=WP_224051513.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356406.1;locus_tag=LDO49_RS05895;product=carbonic anhydrase;protein_id=WP_224051513.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 2650 3546 . + . ID=gene-LDO49_RS05900;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=LDO49_RS05900;old_locus_tag=BCEP4_130005 NZ_CAJZAV010000035.1 Protein Homology CDS 2650 3546 . + 0 ID=cds-WP_224051514.1;Parent=gene-LDO49_RS05900;Dbxref=GenBank:WP_224051514.1;Name=WP_224051514.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548412.1;locus_tag=LDO49_RS05900;product=transcriptional regulator CynR;protein_id=WP_224051514.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 3631 4086 . + . ID=gene-LDO49_RS05905;Name=LDO49_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05905;old_locus_tag=BCEP4_130006 NZ_CAJZAV010000035.1 Protein Homology CDS 3631 4086 . + 0 ID=cds-WP_048021533.1;Parent=gene-LDO49_RS05905;Dbxref=GenBank:WP_048021533.1;Name=WP_048021533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356408.1;locus_tag=LDO49_RS05905;product=DUF3304 domain-containing protein;protein_id=WP_048021533.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 4126 4329 . - . ID=gene-LDO49_RS05910;Name=LDO49_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05910;old_locus_tag=BCEP4_130007 NZ_CAJZAV010000035.1 Protein Homology CDS 4126 4329 . - 0 ID=cds-WP_059488681.1;Parent=gene-LDO49_RS05910;Dbxref=GenBank:WP_059488681.1;Name=WP_059488681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749416.1;locus_tag=LDO49_RS05910;product=hypothetical protein;protein_id=WP_059488681.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 4364 5695 . - . ID=gene-LDO49_RS05915;Name=LDO49_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05915;old_locus_tag=BCEP4_130008 NZ_CAJZAV010000035.1 Protein Homology CDS 4364 5695 . - 0 ID=cds-WP_059488679.1;Parent=gene-LDO49_RS05915;Dbxref=GenBank:WP_059488679.1;Name=WP_059488679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900462.1;locus_tag=LDO49_RS05915;product=DUF3422 family protein;protein_id=WP_059488679.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 5857 6732 . + . ID=gene-LDO49_RS05920;Name=LDO49_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05920;old_locus_tag=BCEP4_130009 NZ_CAJZAV010000035.1 Protein Homology CDS 5857 6732 . + 0 ID=cds-WP_021160509.1;Parent=gene-LDO49_RS05920;Dbxref=GenBank:WP_021160509.1;Name=WP_021160509.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397730.1;locus_tag=LDO49_RS05920;product=LysR family transcriptional regulator;protein_id=WP_021160509.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 6733 7293 . - . ID=gene-LDO49_RS05925;Name=LDO49_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05925;old_locus_tag=BCEP4_130010 NZ_CAJZAV010000035.1 Protein Homology CDS 6733 7293 . - 0 ID=cds-WP_059553713.1;Parent=gene-LDO49_RS05925;Dbxref=GenBank:WP_059553713.1;Name=WP_059553713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356412.1;locus_tag=LDO49_RS05925;product=hypothetical protein;protein_id=WP_059553713.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 7449 7799 . - . ID=gene-LDO49_RS05930;Name=LDO49_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05930;old_locus_tag=BCEP4_130011 NZ_CAJZAV010000035.1 Protein Homology CDS 7449 7799 . - 0 ID=cds-WP_224051516.1;Parent=gene-LDO49_RS05930;Dbxref=GenBank:WP_224051516.1;Name=WP_224051516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356413.1;locus_tag=LDO49_RS05930;product=hypothetical protein;protein_id=WP_224051516.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 8033 8950 . - . ID=gene-LDO49_RS05935;Name=LDO49_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05935;old_locus_tag=BCEP4_130012 NZ_CAJZAV010000035.1 Protein Homology CDS 8033 8950 . - 0 ID=cds-WP_027789893.1;Parent=gene-LDO49_RS05935;Dbxref=GenBank:WP_027789893.1;Name=WP_027789893.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397728.1;locus_tag=LDO49_RS05935;product=LysR family transcriptional regulator;protein_id=WP_027789893.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 9277 9801 . + . ID=gene-LDO49_RS05940;Name=fae;gbkey=Gene;gene=fae;gene_biotype=protein_coding;locus_tag=LDO49_RS05940;old_locus_tag=BCEP4_130014 NZ_CAJZAV010000035.1 Protein Homology CDS 9277 9801 . + 0 ID=cds-WP_021160514.1;Parent=gene-LDO49_RS05940;Dbxref=GenBank:WP_021160514.1;Name=WP_021160514.1;Ontology_term=GO:0016051,GO:0016840;gbkey=CDS;gene=fae;go_function=carbon-nitrogen lyase activity|0016840||IEA;go_process=carbohydrate biosynthetic process|0016051||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356415.1;locus_tag=LDO49_RS05940;product=formaldehyde-activating enzyme;protein_id=WP_021160514.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 9843 10865 . + . ID=gene-LDO49_RS05945;Name=LDO49_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05945;old_locus_tag=BCEP4_130013 NZ_CAJZAV010000035.1 Protein Homology CDS 9843 10865 . + 0 ID=cds-WP_021160515.1;Parent=gene-LDO49_RS05945;Dbxref=GenBank:WP_021160515.1;Name=WP_021160515.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356416.1;locus_tag=LDO49_RS05945;product=aldo/keto reductase;protein_id=WP_021160515.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 10888 12339 . + . ID=gene-LDO49_RS05950;Name=LDO49_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05950;old_locus_tag=BCEP4_130015 NZ_CAJZAV010000035.1 Protein Homology CDS 10888 12339 . + 0 ID=cds-WP_224051518.1;Parent=gene-LDO49_RS05950;Dbxref=GenBank:WP_224051518.1;Name=WP_224051518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007587698.1;locus_tag=LDO49_RS05950;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_224051518.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 12504 13838 . + . ID=gene-LDO49_RS05955;Name=LDO49_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05955;old_locus_tag=BCEP4_130016 NZ_CAJZAV010000035.1 Protein Homology CDS 12504 13838 . + 0 ID=cds-WP_224051550.1;Parent=gene-LDO49_RS05955;Dbxref=GenBank:WP_224051550.1;Name=WP_224051550.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397724.1;locus_tag=LDO49_RS05955;product=MFS transporter;protein_id=WP_224051550.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 13996 14295 . - . ID=gene-LDO49_RS05960;Name=LDO49_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05960;old_locus_tag=BCEP4_130018 NZ_CAJZAV010000035.1 Protein Homology CDS 13996 14295 . - 0 ID=cds-WP_048021583.1;Parent=gene-LDO49_RS05960;Dbxref=GenBank:WP_048021583.1;Name=WP_048021583.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397720.1;locus_tag=LDO49_RS05960;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_048021583.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 14292 14549 . - . ID=gene-LDO49_RS05965;Name=LDO49_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05965;old_locus_tag=BCEP4_130019 NZ_CAJZAV010000035.1 Protein Homology CDS 14292 14549 . - 0 ID=cds-WP_048021519.1;Parent=gene-LDO49_RS05965;Dbxref=GenBank:WP_048021519.1;Name=WP_048021519.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397719.1;locus_tag=LDO49_RS05965;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_048021519.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 14772 15491 . + . ID=gene-LDO49_RS05970;Name=LDO49_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05970;old_locus_tag=BCEP4_130021 NZ_CAJZAV010000035.1 GeneMarkS-2+ CDS 14772 15491 . + 0 ID=cds-WP_063807516.1;Parent=gene-LDO49_RS05970;Dbxref=GenBank:WP_063807516.1;Name=WP_063807516.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS05970;product=hypothetical protein;protein_id=WP_063807516.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 15598 16323 . + . ID=gene-LDO49_RS05975;Name=LDO49_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05975;old_locus_tag=BCEP4_130022 NZ_CAJZAV010000035.1 Protein Homology CDS 15598 16323 . + 0 ID=cds-WP_124475602.1;Parent=gene-LDO49_RS05975;Dbxref=GenBank:WP_124475602.1;Name=WP_124475602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356422.1;locus_tag=LDO49_RS05975;product=hypothetical protein;protein_id=WP_124475602.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 16422 16685 . + . ID=gene-LDO49_RS05980;Name=LDO49_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05980 NZ_CAJZAV010000035.1 GeneMarkS-2+ CDS 16422 16685 . + 0 ID=cds-WP_124475603.1;Parent=gene-LDO49_RS05980;Dbxref=GenBank:WP_124475603.1;Name=WP_124475603.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS05980;product=hypothetical protein;protein_id=WP_124475603.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 16774 17649 . - . ID=gene-LDO49_RS05985;Name=LDO49_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05985;old_locus_tag=BCEP4_130024 NZ_CAJZAV010000035.1 Protein Homology CDS 16774 17649 . - 0 ID=cds-WP_021160522.1;Parent=gene-LDO49_RS05985;Dbxref=GenBank:WP_021160522.1;Name=WP_021160522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013591317.1;locus_tag=LDO49_RS05985;product=LysR substrate-binding domain-containing protein;protein_id=WP_021160522.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 17889 18827 . + . ID=gene-LDO49_RS05990;Name=LDO49_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS05990;old_locus_tag=BCEP4_130025 NZ_CAJZAV010000035.1 Protein Homology CDS 17889 18827 . + 0 ID=cds-WP_011356424.1;Parent=gene-LDO49_RS05990;Dbxref=GenBank:WP_011356424.1;Name=WP_011356424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689351.1;locus_tag=LDO49_RS05990;product=LysR substrate-binding domain-containing protein;protein_id=WP_011356424.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 19181 20605 . + . ID=gene-LDO49_RS05995;Name=aldA;gbkey=Gene;gene=aldA;gene_biotype=protein_coding;locus_tag=LDO49_RS05995;old_locus_tag=BCEP4_130028 NZ_CAJZAV010000035.1 Protein Homology CDS 19181 20605 . + 0 ID=cds-WP_224051519.1;Parent=gene-LDO49_RS05995;Dbxref=GenBank:WP_224051519.1;Name=WP_224051519.1;Ontology_term=GO:0016620;gbkey=CDS;gene=aldA;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330632.1;locus_tag=LDO49_RS05995;product=aldehyde dehydrogenase;protein_id=WP_224051519.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 20736 22091 . + . ID=gene-LDO49_RS06000;Name=LDO49_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06000;old_locus_tag=BCEP4_130029 NZ_CAJZAV010000035.1 Protein Homology CDS 20736 22091 . + 0 ID=cds-WP_124475605.1;Parent=gene-LDO49_RS06000;Dbxref=GenBank:WP_124475605.1;Name=WP_124475605.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397715.1;locus_tag=LDO49_RS06000;product=MFS transporter;protein_id=WP_124475605.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 22088 23305 . + . ID=gene-LDO49_RS06005;Name=LDO49_RS06005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06005;old_locus_tag=BCEP4_130030 NZ_CAJZAV010000035.1 Protein Homology CDS 22088 23305 . + 0 ID=cds-WP_224051521.1;Parent=gene-LDO49_RS06005;Dbxref=GenBank:WP_224051521.1;Name=WP_224051521.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016969212.1;locus_tag=LDO49_RS06005;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_224051521.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 23321 24988 . + . ID=gene-LDO49_RS06010;Name=LDO49_RS06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06010;old_locus_tag=BCEP4_130031 NZ_CAJZAV010000035.1 Protein Homology CDS 23321 24988 . + 0 ID=cds-WP_059811731.1;Parent=gene-LDO49_RS06010;Dbxref=GenBank:WP_059811731.1;Name=WP_059811731.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397713.1;locus_tag=LDO49_RS06010;product=GMC family oxidoreductase;protein_id=WP_059811731.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 25065 25364 . - . ID=gene-LDO49_RS06015;Name=LDO49_RS06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06015;old_locus_tag=BCEP4_130032 NZ_CAJZAV010000035.1 Protein Homology CDS 25065 25364 . - 0 ID=cds-WP_059687231.1;Parent=gene-LDO49_RS06015;Dbxref=GenBank:WP_059687231.1;Name=WP_059687231.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013500.6;locus_tag=LDO49_RS06015;product=barstar family protein;protein_id=WP_059687231.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 25518 26411 . - . ID=gene-LDO49_RS06020;Name=LDO49_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06020;old_locus_tag=BCEP4_130033 NZ_CAJZAV010000035.1 Protein Homology CDS 25518 26411 . - 0 ID=cds-WP_021160529.1;Parent=gene-LDO49_RS06020;Dbxref=GenBank:WP_021160529.1;Name=WP_021160529.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007736580.1;locus_tag=LDO49_RS06020;product=LysR family transcriptional regulator;protein_id=WP_021160529.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 26533 27564 . + . ID=gene-LDO49_RS06025;Name=LDO49_RS06025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06025;old_locus_tag=BCEP4_130034 NZ_CAJZAV010000035.1 Protein Homology CDS 26533 27564 . + 0 ID=cds-WP_124475607.1;Parent=gene-LDO49_RS06025;Dbxref=GenBank:WP_124475607.1;Name=WP_124475607.1;Ontology_term=GO:0003960,GO:0048038,GO:0070402;gbkey=CDS;go_function=quinone reductase (NADPH) activity|0003960||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900588.1;locus_tag=LDO49_RS06025;product=NAD(P)H-quinone oxidoreductase;protein_id=WP_124475607.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 27579 28400 . - . ID=gene-LDO49_RS06030;Name=LDO49_RS06030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06030;old_locus_tag=BCEP4_130035 NZ_CAJZAV010000035.1 Protein Homology CDS 27579 28400 . - 0 ID=cds-WP_059621212.1;Parent=gene-LDO49_RS06030;Dbxref=GenBank:WP_059621212.1;Name=WP_059621212.1;Ontology_term=GO:0015697,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=quaternary ammonium group transport|0015697||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009769519.1;locus_tag=LDO49_RS06030;product=quaternary amine ABC transporter ATP-binding protein;protein_id=WP_059621212.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 28415 29380 . - . ID=gene-LDO49_RS06035;Name=LDO49_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06035;old_locus_tag=BCEP4_130036 NZ_CAJZAV010000035.1 Protein Homology CDS 28415 29380 . - 0 ID=cds-WP_021160532.1;Parent=gene-LDO49_RS06035;Dbxref=GenBank:WP_021160532.1;Name=WP_021160532.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397710.1;locus_tag=LDO49_RS06035;product=ABC transporter permease;protein_id=WP_021160532.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 29451 30488 . - . ID=gene-LDO49_RS06040;Name=LDO49_RS06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06040;old_locus_tag=BCEP4_130037 NZ_CAJZAV010000035.1 Protein Homology CDS 29451 30488 . - 0 ID=cds-WP_048021501.1;Parent=gene-LDO49_RS06040;Dbxref=GenBank:WP_048021501.1;Name=WP_048021501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356435.1;locus_tag=LDO49_RS06040;product=ABC transporter substrate-binding protein;protein_id=WP_048021501.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 31065 32216 . + . ID=gene-LDO49_RS06045;Name=LDO49_RS06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06045;old_locus_tag=BCEP4_130038 NZ_CAJZAV010000035.1 Protein Homology CDS 31065 32216 . + 0 ID=cds-WP_059652508.1;Parent=gene-LDO49_RS06045;Dbxref=GenBank:WP_059652508.1;Name=WP_059652508.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012426823.1;locus_tag=LDO49_RS06045;product=porin;protein_id=WP_059652508.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 32545 33354 . + . ID=gene-LDO49_RS06050;Name=blaOXA;gbkey=Gene;gene=blaOXA;gene_biotype=protein_coding;locus_tag=LDO49_RS06050;old_locus_tag=BCEP4_130039 NZ_CAJZAV010000035.1 Protein Homology CDS 32545 33354 . + 0 ID=cds-WP_059811740.1;Parent=gene-LDO49_RS06050;Dbxref=GenBank:WP_059811740.1;Name=WP_059811740.1;Ontology_term=GO:0008800;gbkey=CDS;gene=blaOXA;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495848.1;locus_tag=LDO49_RS06050;product=OXA-1043 family class D beta-lactamase;protein_id=WP_059811740.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 33351 34490 . + . ID=gene-LDO49_RS06055;Name=LDO49_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06055;old_locus_tag=BCEP4_130040 NZ_CAJZAV010000035.1 Protein Homology CDS 33351 34490 . + 0 ID=cds-WP_059553729.1;Parent=gene-LDO49_RS06055;Dbxref=GenBank:WP_059553729.1;Name=WP_059553729.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356440.1;locus_tag=LDO49_RS06055;product=acyltransferase family protein;protein_id=WP_059553729.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 34663 35406 . - . ID=gene-LDO49_RS06060;Name=LDO49_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06060;old_locus_tag=BCEP4_130041 NZ_CAJZAV010000035.1 Protein Homology CDS 34663 35406 . - 0 ID=cds-WP_124475608.1;Parent=gene-LDO49_RS06060;Dbxref=GenBank:WP_124475608.1;Name=WP_124475608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900468.1;locus_tag=LDO49_RS06060;product=hypothetical protein;protein_id=WP_124475608.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 35440 36831 . - . ID=gene-LDO49_RS06065;Name=LDO49_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06065;old_locus_tag=BCEP4_130042 NZ_CAJZAV010000035.1 Protein Homology CDS 35440 36831 . - 0 ID=cds-WP_059553733.1;Parent=gene-LDO49_RS06065;Dbxref=GenBank:WP_059553733.1;Name=WP_059553733.1;Ontology_term=GO:0004035,GO:0046872,GO:0106219;gbkey=CDS;go_function=alkaline phosphatase activity|0004035||IEA,metal ion binding|0046872||IEA,zinc ion sensor activity|0106219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024327.1;locus_tag=LDO49_RS06065;product=alkaline phosphatase;protein_id=WP_059553733.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 36864 38303 . - . ID=gene-LDO49_RS06070;Name=LDO49_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06070;old_locus_tag=BCEP4_130043 NZ_CAJZAV010000035.1 Protein Homology CDS 36864 38303 . - 0 ID=cds-WP_124475609.1;Parent=gene-LDO49_RS06070;Dbxref=GenBank:WP_124475609.1;Name=WP_124475609.1;Ontology_term=GO:0004035,GO:0046872,GO:0106219;gbkey=CDS;go_function=alkaline phosphatase activity|0004035||IEA,metal ion binding|0046872||IEA,zinc ion sensor activity|0106219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893293.1;locus_tag=LDO49_RS06070;product=alkaline phosphatase;protein_id=WP_124475609.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 38458 39048 . - . ID=gene-LDO49_RS06075;Name=LDO49_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06075;old_locus_tag=BCEP4_130044 NZ_CAJZAV010000035.1 Protein Homology CDS 38458 39048 . - 0 ID=cds-WP_060073888.1;Parent=gene-LDO49_RS06075;Dbxref=GenBank:WP_060073888.1;Name=WP_060073888.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495853.1;locus_tag=LDO49_RS06075;product=class I SAM-dependent methyltransferase;protein_id=WP_060073888.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 39292 41013 . - . ID=gene-LDO49_RS06080;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=LDO49_RS06080;old_locus_tag=BCEP4_130046 NZ_CAJZAV010000035.1 Protein Homology CDS 39292 41013 . - 0 ID=cds-WP_124475639.1;Parent=gene-LDO49_RS06080;Dbxref=GenBank:WP_124475639.1;Name=WP_124475639.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762136.1;locus_tag=LDO49_RS06080;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_124475639.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 41271 41798 . - . ID=gene-LDO49_RS06085;Name=LDO49_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06085;old_locus_tag=BCEP4_130047 NZ_CAJZAV010000035.1 Protein Homology CDS 41271 41798 . - 0 ID=cds-WP_027789923.1;Parent=gene-LDO49_RS06085;Dbxref=GenBank:WP_027789923.1;Name=WP_027789923.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900480.1;locus_tag=LDO49_RS06085;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_027789923.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 41962 44694 . + . ID=gene-LDO49_RS06090;Name=mdeB;gbkey=Gene;gene=mdeB;gene_biotype=protein_coding;locus_tag=LDO49_RS06090;old_locus_tag=BCEP4_130048 NZ_CAJZAV010000035.1 Protein Homology CDS 41962 44694 . + 0 ID=cds-WP_224051522.1;Parent=gene-LDO49_RS06090;Dbxref=GenBank:WP_224051522.1;Name=WP_224051522.1;Ontology_term=GO:0016491;gbkey=CDS;gene=mdeB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900481.1;locus_tag=LDO49_RS06090;product=alpha-ketoglutarate dehydrogenase;protein_id=WP_224051522.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 44809 45309 . - . ID=gene-LDO49_RS06095;Name=LDO49_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06095;old_locus_tag=BCEP4_130049 NZ_CAJZAV010000035.1 Protein Homology CDS 44809 45309 . - 0 ID=cds-WP_059587147.1;Parent=gene-LDO49_RS06095;Dbxref=GenBank:WP_059587147.1;Name=WP_059587147.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762135.1;locus_tag=LDO49_RS06095;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_059587147.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 45508 46524 . + . ID=gene-LDO49_RS06100;Name=LDO49_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06100;old_locus_tag=BCEP4_130051 NZ_CAJZAV010000035.1 Protein Homology CDS 45508 46524 . + 0 ID=cds-WP_059860078.1;Parent=gene-LDO49_RS06100;Dbxref=GenBank:WP_059860078.1;Name=WP_059860078.1;Ontology_term=GO:0009310,GO:0008660,GO:0030170;gbkey=CDS;go_function=1-aminocyclopropane-1-carboxylate deaminase activity|0008660||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=amine catabolic process|0009310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099870.1;locus_tag=LDO49_RS06100;product=1-aminocyclopropane-1-carboxylate deaminase;protein_id=WP_059860078.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 47119 48531 . + . ID=gene-LDO49_RS06105;Name=LDO49_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06105;old_locus_tag=BCEP4_130052 NZ_CAJZAV010000035.1 Protein Homology CDS 47119 48531 . + 0 ID=cds-WP_224051524.1;Parent=gene-LDO49_RS06105;Dbxref=GenBank:WP_224051524.1;Name=WP_224051524.1;Ontology_term=GO:0016780;gbkey=CDS;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356453.1;locus_tag=LDO49_RS06105;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_224051524.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 48584 49735 . + . ID=gene-LDO49_RS06110;Name=LDO49_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06110;old_locus_tag=BCEP4_130053 NZ_CAJZAV010000035.1 Protein Homology CDS 48584 49735 . + 0 ID=cds-WP_059587142.1;Parent=gene-LDO49_RS06110;Dbxref=GenBank:WP_059587142.1;Name=WP_059587142.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356454.1;locus_tag=LDO49_RS06110;product=polysaccharide biosynthesis/export family protein;protein_id=WP_059587142.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 49732 50229 . + . ID=gene-LDO49_RS06115;Name=LDO49_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06115;old_locus_tag=BCEP4_130054 NZ_CAJZAV010000035.1 Protein Homology CDS 49732 50229 . + 0 ID=cds-WP_059621202.1;Parent=gene-LDO49_RS06115;Dbxref=GenBank:WP_059621202.1;Name=WP_059621202.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356455.1;locus_tag=LDO49_RS06115;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_059621202.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 50226 52523 . + . ID=gene-LDO49_RS06120;Name=LDO49_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06120;old_locus_tag=BCEP4_130055 NZ_CAJZAV010000035.1 Protein Homology CDS 50226 52523 . + 0 ID=cds-WP_124475613.1;Parent=gene-LDO49_RS06120;Dbxref=GenBank:WP_124475613.1;Name=WP_124475613.1;Ontology_term=GO:0000271;gbkey=CDS;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356456.1;locus_tag=LDO49_RS06120;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_124475613.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 52670 53767 . + . ID=gene-LDO49_RS06125;Name=LDO49_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06125;old_locus_tag=BCEP4_130056 NZ_CAJZAV010000035.1 Protein Homology CDS 52670 53767 . + 0 ID=cds-WP_253074670.1;Parent=gene-LDO49_RS06125;Dbxref=GenBank:WP_253074670.1;Name=WP_253074670.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338887.1;locus_tag=LDO49_RS06125;product=glycosyltransferase family 4 protein;protein_id=WP_253074670.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 53764 54936 . + . ID=gene-LDO49_RS06130;Name=LDO49_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06130;old_locus_tag=BCEP4_130057 NZ_CAJZAV010000035.1 Protein Homology CDS 53764 54936 . + 0 ID=cds-WP_124475615.1;Parent=gene-LDO49_RS06130;Dbxref=GenBank:WP_124475615.1;Name=WP_124475615.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356458.1;locus_tag=LDO49_RS06130;product=polysaccharide pyruvyl transferase family protein;protein_id=WP_124475615.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 54930 56222 . + . ID=gene-LDO49_RS06135;Name=LDO49_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06135;old_locus_tag=BCEP4_130058 NZ_CAJZAV010000035.1 Protein Homology CDS 54930 56222 . + 0 ID=cds-WP_124475616.1;Parent=gene-LDO49_RS06135;Dbxref=GenBank:WP_124475616.1;Name=WP_124475616.1;Ontology_term=GO:0140327,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356459.1;locus_tag=LDO49_RS06135;product=lipopolysaccharide biosynthesis protein;protein_id=WP_124475616.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 56212 57342 . + . ID=gene-LDO49_RS06140;Name=LDO49_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06140;old_locus_tag=BCEP4_130059 NZ_CAJZAV010000035.1 Protein Homology CDS 56212 57342 . + 0 ID=cds-WP_224051526.1;Parent=gene-LDO49_RS06140;Dbxref=GenBank:WP_224051526.1;Name=WP_224051526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338890.1;locus_tag=LDO49_RS06140;product=hypothetical protein;protein_id=WP_224051526.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 57335 58375 . + . ID=gene-LDO49_RS06145;Name=LDO49_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06145;old_locus_tag=BCEP4_130060 NZ_CAJZAV010000035.1 Protein Homology CDS 57335 58375 . + 0 ID=cds-WP_224051527.1;Parent=gene-LDO49_RS06145;Dbxref=GenBank:WP_224051527.1;Name=WP_224051527.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330661.1;locus_tag=LDO49_RS06145;product=acyltransferase family protein;protein_id=WP_224051527.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 59117 59785 . - . ID=gene-LDO49_RS06150;Name=LDO49_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06150;old_locus_tag=BCEP4_130062 NZ_CAJZAV010000035.1 Protein Homology CDS 59117 59785 . - 0 ID=cds-WP_224051528.1;Parent=gene-LDO49_RS06150;Dbxref=GenBank:WP_224051528.1;Name=WP_224051528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356462.1;locus_tag=LDO49_RS06150;product=hypothetical protein;protein_id=WP_224051528.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 59997 60545 . - . ID=gene-LDO49_RS06155;Name=LDO49_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06155;old_locus_tag=BCEP4_130064 NZ_CAJZAV010000035.1 Protein Homology CDS 59997 60545 . - 0 ID=cds-WP_060280146.1;Parent=gene-LDO49_RS06155;Dbxref=GenBank:WP_060280146.1;Name=WP_060280146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330663.1;locus_tag=LDO49_RS06155;product=hypothetical protein;protein_id=WP_060280146.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 60554 61573 . - . ID=gene-LDO49_RS06160;Name=LDO49_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06160;old_locus_tag=BCEP4_130065 NZ_CAJZAV010000035.1 GeneMarkS-2+ CDS 60554 61573 . - 0 ID=cds-WP_124475618.1;Parent=gene-LDO49_RS06160;Dbxref=GenBank:WP_124475618.1;Name=WP_124475618.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS06160;product=hypothetical protein;protein_id=WP_124475618.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 61683 62162 . - . ID=gene-LDO49_RS06165;Name=LDO49_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06165;old_locus_tag=BCEP4_130066 NZ_CAJZAV010000035.1 Protein Homology CDS 61683 62162 . - 0 ID=cds-WP_224051552.1;Parent=gene-LDO49_RS06165;Dbxref=GenBank:WP_224051552.1;Name=WP_224051552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330665.1;locus_tag=LDO49_RS06165;product=hypothetical protein;protein_id=WP_224051552.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 62162 62848 . - . ID=gene-LDO49_RS06170;Name=LDO49_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06170;old_locus_tag=BCEP4_130067 NZ_CAJZAV010000035.1 Protein Homology CDS 62162 62848 . - 0 ID=cds-WP_224051529.1;Parent=gene-LDO49_RS06170;Dbxref=GenBank:WP_224051529.1;Name=WP_224051529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356466.1;locus_tag=LDO49_RS06170;product=pilus assembly protein;protein_id=WP_224051529.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 62845 65013 . - . ID=gene-LDO49_RS06175;Name=LDO49_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06175;old_locus_tag=BCEP4_130068 NZ_CAJZAV010000035.1 Protein Homology CDS 62845 65013 . - 0 ID=cds-WP_124475641.1;Parent=gene-LDO49_RS06175;Dbxref=GenBank:WP_124475641.1;Name=WP_124475641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330667.1;locus_tag=LDO49_RS06175;product=TcfC E-set like domain-containing protein;protein_id=WP_124475641.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 65250 65777 . - . ID=gene-LDO49_RS06180;Name=LDO49_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06180;old_locus_tag=BCEP4_130069 NZ_CAJZAV010000035.1 Protein Homology CDS 65250 65777 . - 0 ID=cds-WP_060073861.1;Parent=gene-LDO49_RS06180;Dbxref=GenBank:WP_060073861.1;Name=WP_060073861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330668.1;locus_tag=LDO49_RS06180;product=fimbrial assembly protein;protein_id=WP_060073861.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 66521 69598 . - . ID=gene-LDO49_RS06185;Name=LDO49_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06185;old_locus_tag=BCEP4_130072 NZ_CAJZAV010000035.1 Protein Homology CDS 66521 69598 . - 0 ID=cds-WP_224051530.1;Parent=gene-LDO49_RS06185;Dbxref=GenBank:WP_224051530.1;Name=WP_224051530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495874.1;locus_tag=LDO49_RS06185;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_224051530.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 69773 70447 . - . ID=gene-LDO49_RS06190;Name=LDO49_RS06190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06190;old_locus_tag=BCEP4_130073 NZ_CAJZAV010000035.1 Protein Homology CDS 69773 70447 . - 0 ID=cds-WP_059488619.1;Parent=gene-LDO49_RS06190;Dbxref=GenBank:WP_059488619.1;Name=WP_059488619.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356470.1;locus_tag=LDO49_RS06190;product=response regulator;protein_id=WP_059488619.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 70847 71119 . - . ID=gene-LDO49_RS06195;Name=LDO49_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06195;old_locus_tag=BCEP4_130074 NZ_CAJZAV010000035.1 Protein Homology CDS 70847 71119 . - 0 ID=cds-WP_308043792.1;Parent=gene-LDO49_RS06195;Dbxref=GenBank:WP_308043792.1;Name=WP_308043792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099878.1;locus_tag=LDO49_RS06195;product=hypothetical protein;protein_id=WP_308043792.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 71145 74228 . - . ID=gene-LDO49_RS06200;Name=LDO49_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06200;old_locus_tag=BCEP4_130075 NZ_CAJZAV010000035.1 Protein Homology CDS 71145 74228 . - 0 ID=cds-WP_224051531.1;Parent=gene-LDO49_RS06200;Dbxref=GenBank:WP_224051531.1;Name=WP_224051531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414956.1;locus_tag=LDO49_RS06200;product=ATP-binding protein;protein_id=WP_224051531.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 74593 75624 . - . ID=gene-LDO49_RS06205;Name=LDO49_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06205;old_locus_tag=BCEP4_130077 NZ_CAJZAV010000035.1 Protein Homology CDS 74593 75624 . - 0 ID=cds-WP_048021456.1;Parent=gene-LDO49_RS06205;Dbxref=GenBank:WP_048021456.1;Name=WP_048021456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548425.1;locus_tag=LDO49_RS06205;product=hypothetical protein;protein_id=WP_048021456.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 75739 76566 . - . ID=gene-LDO49_RS06210;Name=LDO49_RS06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06210;old_locus_tag=BCEP4_130078 NZ_CAJZAV010000035.1 Protein Homology CDS 75739 76566 . - 0 ID=cds-WP_021160568.1;Parent=gene-LDO49_RS06210;Dbxref=GenBank:WP_021160568.1;Name=WP_021160568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498538.1;locus_tag=LDO49_RS06210;product=hypothetical protein;protein_id=WP_021160568.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 76687 77274 . - . ID=gene-LDO49_RS06215;Name=LDO49_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06215;old_locus_tag=BCEP4_130079 NZ_CAJZAV010000035.1 Protein Homology CDS 76687 77274 . - 0 ID=cds-WP_224051532.1;Parent=gene-LDO49_RS06215;Dbxref=GenBank:WP_224051532.1;Name=WP_224051532.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479894.1;locus_tag=LDO49_RS06215;product=tetratricopeptide repeat protein;protein_id=WP_224051532.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 77634 78506 . + . ID=gene-LDO49_RS06220;Name=LDO49_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06220;old_locus_tag=BCEP4_130080 NZ_CAJZAV010000035.1 Protein Homology CDS 77634 78506 . + 0 ID=cds-WP_021160570.1;Parent=gene-LDO49_RS06220;Dbxref=GenBank:WP_021160570.1;Name=WP_021160570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548427.1;locus_tag=LDO49_RS06220;product=response regulator;protein_id=WP_021160570.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 78556 79059 . + . ID=gene-LDO49_RS06225;Name=LDO49_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06225;old_locus_tag=BCEP4_130081 NZ_CAJZAV010000035.1 Protein Homology CDS 78556 79059 . + 0 ID=cds-WP_048021454.1;Parent=gene-LDO49_RS06225;Dbxref=GenBank:WP_048021454.1;Name=WP_048021454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543980.1;locus_tag=LDO49_RS06225;product=molybdopterin-dependent oxidoreductase;protein_id=WP_048021454.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 79056 80888 . + . ID=gene-LDO49_RS06230;Name=atsR;gbkey=Gene;gene=atsR;gene_biotype=protein_coding;locus_tag=LDO49_RS06230;old_locus_tag=BCEP4_130082 NZ_CAJZAV010000035.1 Protein Homology CDS 79056 80888 . + 0 ID=cds-WP_224051534.1;Parent=gene-LDO49_RS06230;Dbxref=GenBank:WP_224051534.1;Name=WP_224051534.1;Note=AtsR signifies Adherence and T6SS Regulator.;gbkey=CDS;gene=atsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485471.1;locus_tag=LDO49_RS06230;product=hybrid sensor histidine kinase/response regulator AtsR;protein_id=WP_224051534.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 80952 81371 . - . ID=gene-LDO49_RS06235;Name=LDO49_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06235;old_locus_tag=BCEP4_130083 NZ_CAJZAV010000035.1 Protein Homology CDS 80952 81371 . - 0 ID=cds-WP_048021450.1;Parent=gene-LDO49_RS06235;Dbxref=GenBank:WP_048021450.1;Name=WP_048021450.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255409.1;locus_tag=LDO49_RS06235;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_048021450.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 81382 81708 . - . ID=gene-LDO49_RS06240;Name=LDO49_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06240;old_locus_tag=BCEP4_130084 NZ_CAJZAV010000035.1 Protein Homology CDS 81382 81708 . - 0 ID=cds-WP_021160574.1;Parent=gene-LDO49_RS06240;Dbxref=GenBank:WP_021160574.1;Name=WP_021160574.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485487.1;locus_tag=LDO49_RS06240;product=thioredoxin family protein;protein_id=WP_021160574.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 81935 82636 . + . ID=gene-LDO49_RS06245;Name=LDO49_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06245;old_locus_tag=BCEP4_130085 NZ_CAJZAV010000035.1 Protein Homology CDS 81935 82636 . + 0 ID=cds-WP_060073851.1;Parent=gene-LDO49_RS06245;Dbxref=GenBank:WP_060073851.1;Name=WP_060073851.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485480.1;locus_tag=LDO49_RS06245;product=flavin reductase family protein;protein_id=WP_060073851.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 82792 83724 . - . ID=gene-LDO49_RS06250;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=LDO49_RS06250;old_locus_tag=BCEP4_130086 NZ_CAJZAV010000035.1 Protein Homology CDS 82792 83724 . - 0 ID=cds-WP_059498282.1;Parent=gene-LDO49_RS06250;Dbxref=GenBank:WP_059498282.1;Name=WP_059498282.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=gcvA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336962.1;locus_tag=LDO49_RS06250;product=transcriptional regulator GcvA;protein_id=WP_059498282.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 83863 85065 . + . ID=gene-LDO49_RS06255;Name=LDO49_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06255;old_locus_tag=BCEP4_130087 NZ_CAJZAV010000035.1 Protein Homology CDS 83863 85065 . + 0 ID=cds-WP_060073921.1;Parent=gene-LDO49_RS06255;Dbxref=GenBank:WP_060073921.1;Name=WP_060073921.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485556.1;locus_tag=LDO49_RS06255;product=MFS transporter;protein_id=WP_060073921.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 85080 85976 . + . ID=gene-LDO49_RS06260;Name=LDO49_RS06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06260;old_locus_tag=BCEP4_130088 NZ_CAJZAV010000035.1 Protein Homology CDS 85080 85976 . + 0 ID=cds-WP_060073849.1;Parent=gene-LDO49_RS06260;Dbxref=GenBank:WP_060073849.1;Name=WP_060073849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372458.1;locus_tag=LDO49_RS06260;product=oxidoreductase;protein_id=WP_060073849.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 86175 86507 . + . ID=gene-LDO49_RS06265;Name=LDO49_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06265;old_locus_tag=BCEP4_130089 NZ_CAJZAV010000035.1 Protein Homology CDS 86175 86507 . + 0 ID=cds-WP_048021448.1;Parent=gene-LDO49_RS06265;Dbxref=GenBank:WP_048021448.1;Name=WP_048021448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338838.1;locus_tag=LDO49_RS06265;product=DUF2322 family protein;protein_id=WP_048021448.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 86596 87456 . + . ID=gene-LDO49_RS06270;Name=LDO49_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06270;old_locus_tag=BCEP4_130090 NZ_CAJZAV010000035.1 Protein Homology CDS 86596 87456 . + 0 ID=cds-WP_372585830.1;Parent=gene-LDO49_RS06270;Dbxref=GenBank:WP_372585830.1;Name=WP_372585830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356484.1;locus_tag=LDO49_RS06270;product=hypothetical protein;protein_id=WP_372585830.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 87587 88219 . + . ID=gene-LDO49_RS06275;Name=LDO49_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06275;old_locus_tag=BCEP4_130091 NZ_CAJZAV010000035.1 Protein Homology CDS 87587 88219 . + 0 ID=cds-WP_059488607.1;Parent=gene-LDO49_RS06275;Dbxref=GenBank:WP_059488607.1;Name=WP_059488607.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007745694.1;locus_tag=LDO49_RS06275;product=LysE family translocator;protein_id=WP_059488607.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 88277 88942 . - . ID=gene-LDO49_RS06280;Name=LDO49_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06280;old_locus_tag=BCEP4_130092 NZ_CAJZAV010000035.1 Protein Homology CDS 88277 88942 . - 0 ID=cds-WP_060073846.1;Parent=gene-LDO49_RS06280;Dbxref=GenBank:WP_060073846.1;Name=WP_060073846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660069.1;locus_tag=LDO49_RS06280;product=YebB family permuted papain-like enzyme;protein_id=WP_060073846.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 89087 89656 . - . ID=gene-LDO49_RS06285;Name=LDO49_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06285;old_locus_tag=BCEP4_130094 NZ_CAJZAV010000035.1 Protein Homology CDS 89087 89656 . - 0 ID=cds-WP_048021440.1;Parent=gene-LDO49_RS06285;Dbxref=GenBank:WP_048021440.1;Name=WP_048021440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494615.1;locus_tag=LDO49_RS06285;product=hypothetical protein;protein_id=WP_048021440.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 89885 90343 . - . ID=gene-LDO49_RS06290;Name=LDO49_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06290;old_locus_tag=BCEP4_130096 NZ_CAJZAV010000035.1 Protein Homology CDS 89885 90343 . - 0 ID=cds-WP_006749370.1;Parent=gene-LDO49_RS06290;Dbxref=GenBank:WP_006749370.1;Name=WP_006749370.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330690.1;locus_tag=LDO49_RS06290;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_006749370.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 90469 91203 . + . ID=gene-LDO49_RS06295;Name=LDO49_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06295;old_locus_tag=BCEP4_130097 NZ_CAJZAV010000035.1 Protein Homology CDS 90469 91203 . + 0 ID=cds-WP_048021436.1;Parent=gene-LDO49_RS06295;Dbxref=GenBank:WP_048021436.1;Name=WP_048021436.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217715.1;locus_tag=LDO49_RS06295;product=AzlC family ABC transporter permease;protein_id=WP_048021436.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 91196 91504 . + . ID=gene-LDO49_RS06300;Name=LDO49_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06300;old_locus_tag=BCEP4_130098 NZ_CAJZAV010000035.1 Protein Homology CDS 91196 91504 . + 0 ID=cds-WP_060225747.1;Parent=gene-LDO49_RS06300;Dbxref=GenBank:WP_060225747.1;Name=WP_060225747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479907.1;locus_tag=LDO49_RS06300;product=AzlD family protein;protein_id=WP_060225747.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 91719 92379 . + . ID=gene-LDO49_RS06305;Name=surE;end_range=92379,.;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=LDO49_RS06305;old_locus_tag=BCEP4_130099;partial=true NZ_CAJZAV010000035.1 Protein Homology CDS 91719 92379 . + 0 ID=cds-WP_224051556.1;Parent=gene-LDO49_RS06305;Dbxref=GenBank:WP_224051556.1;Name=WP_224051556.1;Ontology_term=GO:0008252;end_range=92379,.;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699171.1;locus_tag=LDO49_RS06305;partial=true;product=5'/3'-nucleotidase SurE;protein_id=WP_224051556.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 92641 93462 . - . ID=gene-LDO49_RS06310;Name=LDO49_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06310;old_locus_tag=BCEP4_130101 NZ_CAJZAV010000035.1 Protein Homology CDS 92641 93462 . - 0 ID=cds-WP_021160587.1;Parent=gene-LDO49_RS06310;Dbxref=GenBank:WP_021160587.1;Name=WP_021160587.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749366.1;locus_tag=LDO49_RS06310;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_021160587.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq pseudogene 93495 93658 . - . ID=gene-LDO49_RS06315;Name=LDO49_RS06315;end_range=93658,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS06315;old_locus_tag=BCEP4_130102;partial=true;pseudo=true;start_range=.,93495 NZ_CAJZAV010000035.1 Protein Homology CDS 93495 93658 . - 0 ID=cds-LDO49_RS06315;Parent=gene-LDO49_RS06315;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=93658,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190526.1;locus_tag=LDO49_RS06315;partial=true;product=MFS transporter;pseudo=true;start_range=.,93495;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 93714 96377 . - . ID=gene-LDO49_RS06320;Name=LDO49_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06320;old_locus_tag=BCEP4_130103 NZ_CAJZAV010000035.1 Protein Homology CDS 93714 96377 . - 0 ID=cds-WP_224051535.1;Parent=gene-LDO49_RS06320;Dbxref=GenBank:WP_224051535.1;Name=WP_224051535.1;Ontology_term=GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356496.1;locus_tag=LDO49_RS06320;product=GH92 family glycosyl hydrolase;protein_id=WP_224051535.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 96445 98904 . - . ID=gene-LDO49_RS06325;Name=LDO49_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06325;old_locus_tag=BCEP4_130104 NZ_CAJZAV010000035.1 Protein Homology CDS 96445 98904 . - 0 ID=cds-WP_060073842.1;Parent=gene-LDO49_RS06325;Dbxref=GenBank:WP_060073842.1;Name=WP_060073842.1;Ontology_term=GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356497.1;locus_tag=LDO49_RS06325;product=GH92 family glycosyl hydrolase;protein_id=WP_060073842.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 99232 99696 . - . ID=gene-LDO49_RS06330;Name=LDO49_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06330;old_locus_tag=BCEP4_130106 NZ_CAJZAV010000035.1 Protein Homology CDS 99232 99696 . - 0 ID=cds-WP_059488590.1;Parent=gene-LDO49_RS06330;Dbxref=GenBank:WP_059488590.1;Name=WP_059488590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488377.1;locus_tag=LDO49_RS06330;product=cupin domain-containing protein;protein_id=WP_059488590.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 99937 101289 . - . ID=gene-LDO49_RS06335;Name=LDO49_RS06335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06335;old_locus_tag=BCEP4_130108 NZ_CAJZAV010000035.1 Protein Homology CDS 99937 101289 . - 0 ID=cds-WP_060073838.1;Parent=gene-LDO49_RS06335;Dbxref=GenBank:WP_060073838.1;Name=WP_060073838.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749363.1;locus_tag=LDO49_RS06335;product=pyridoxal phosphate-dependent decarboxylase family protein;protein_id=WP_060073838.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 101315 101614 . - . ID=gene-LDO49_RS06340;Name=LDO49_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06340;old_locus_tag=BCEP4_130109 NZ_CAJZAV010000035.1 Protein Homology CDS 101315 101614 . - 0 ID=cds-WP_021160594.1;Parent=gene-LDO49_RS06340;Dbxref=GenBank:WP_021160594.1;Name=WP_021160594.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749362.1;locus_tag=LDO49_RS06340;product=ArsR/SmtB family transcription factor;protein_id=WP_021160594.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 101789 102676 . - . ID=gene-LDO49_RS06345;Name=LDO49_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06345;old_locus_tag=BCEP4_130110 NZ_CAJZAV010000035.1 Protein Homology CDS 101789 102676 . - 0 ID=cds-WP_124475630.1;Parent=gene-LDO49_RS06345;Dbxref=GenBank:WP_124475630.1;Name=WP_124475630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397665.1;locus_tag=LDO49_RS06345;product=LysR family transcriptional regulator;protein_id=WP_124475630.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 102810 103847 . + . ID=gene-LDO49_RS06350;Name=LDO49_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06350;old_locus_tag=BCEP4_130111 NZ_CAJZAV010000035.1 Protein Homology CDS 102810 103847 . + 0 ID=cds-WP_060073834.1;Parent=gene-LDO49_RS06350;Dbxref=GenBank:WP_060073834.1;Name=WP_060073834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548452.1;locus_tag=LDO49_RS06350;product=aldo/keto reductase;protein_id=WP_060073834.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 103882 105708 . - . ID=gene-LDO49_RS06355;Name=LDO49_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06355;old_locus_tag=BCEP4_130112 NZ_CAJZAV010000035.1 Protein Homology CDS 103882 105708 . - 0 ID=cds-WP_224051536.1;Parent=gene-LDO49_RS06355;Dbxref=GenBank:WP_224051536.1;Name=WP_224051536.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548453.1;locus_tag=LDO49_RS06355;product=ABC transporter ATP-binding protein;protein_id=WP_224051536.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 105745 106047 . + . ID=gene-LDO49_RS06360;Name=LDO49_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06360;old_locus_tag=BCEP4_130113 NZ_CAJZAV010000035.1 Protein Homology CDS 105745 106047 . + 0 ID=cds-WP_048021417.1;Parent=gene-LDO49_RS06360;Dbxref=GenBank:WP_048021417.1;Name=WP_048021417.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005669274.1;locus_tag=LDO49_RS06360;product=ArsR/SmtB family transcription factor;protein_id=WP_048021417.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 106109 107104 . + . ID=gene-LDO49_RS06365;Name=LDO49_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06365;old_locus_tag=BCEP4_130114 NZ_CAJZAV010000035.1 Protein Homology CDS 106109 107104 . + 0 ID=cds-WP_048021415.1;Parent=gene-LDO49_RS06365;Dbxref=GenBank:WP_048021415.1;Name=WP_048021415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013393179.1;locus_tag=LDO49_RS06365;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_048021415.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 107262 107738 . + . ID=gene-LDO49_RS06370;Name=LDO49_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06370;old_locus_tag=BCEP4_130115 NZ_CAJZAV010000035.1 Protein Homology CDS 107262 107738 . + 0 ID=cds-WP_021160597.1;Parent=gene-LDO49_RS06370;Dbxref=GenBank:WP_021160597.1;Name=WP_021160597.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761363.1;locus_tag=LDO49_RS06370;product=GNAT family N-acetyltransferase;protein_id=WP_021160597.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 108056 108319 . + . ID=gene-LDO49_RS06375;Name=LDO49_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06375 NZ_CAJZAV010000035.1 Protein Homology CDS 108056 108319 . + 0 ID=cds-WP_042975682.1;Parent=gene-LDO49_RS06375;Dbxref=GenBank:WP_042975682.1;Name=WP_042975682.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900351.1;locus_tag=LDO49_RS06375;product=helix-turn-helix domain-containing protein;protein_id=WP_042975682.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 108322 109665 . + . ID=gene-LDO49_RS06380;Name=LDO49_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06380;old_locus_tag=BCEP4_130118 NZ_CAJZAV010000035.1 Protein Homology CDS 108322 109665 . + 0 ID=cds-WP_021160599.1;Parent=gene-LDO49_RS06380;Dbxref=GenBank:WP_021160599.1;Name=WP_021160599.1;Ontology_term=GO:0016310,GO:0004674,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766803.1;locus_tag=LDO49_RS06380;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_021160599.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 109708 110433 . - . ID=gene-LDO49_RS06385;Name=LDO49_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06385;old_locus_tag=BCEP4_130119 NZ_CAJZAV010000035.1 Protein Homology CDS 109708 110433 . - 0 ID=cds-WP_060073830.1;Parent=gene-LDO49_RS06385;Dbxref=GenBank:WP_060073830.1;Name=WP_060073830.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494629.1;locus_tag=LDO49_RS06385;product=class I SAM-dependent methyltransferase;protein_id=WP_060073830.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 110627 111634 . + . ID=gene-LDO49_RS06390;Name=LDO49_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06390;old_locus_tag=BCEP4_130120 NZ_CAJZAV010000035.1 Protein Homology CDS 110627 111634 . + 0 ID=cds-WP_060073828.1;Parent=gene-LDO49_RS06390;Dbxref=GenBank:WP_060073828.1;Name=WP_060073828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548461.1;locus_tag=LDO49_RS06390;product=hypothetical protein;protein_id=WP_060073828.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 111893 112480 . + . ID=gene-LDO49_RS06395;Name=LDO49_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06395;old_locus_tag=BCEP4_130121 NZ_CAJZAV010000035.1 Protein Homology CDS 111893 112480 . + 0 ID=cds-WP_059587098.1;Parent=gene-LDO49_RS06395;Dbxref=GenBank:WP_059587098.1;Name=WP_059587098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404509.1;locus_tag=LDO49_RS06395;product=DUF4410 domain-containing protein;protein_id=WP_059587098.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 113118 113927 . + . ID=gene-LDO49_RS06400;Name=LDO49_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06400;old_locus_tag=BCEP4_130123 NZ_CAJZAV010000035.1 Protein Homology CDS 113118 113927 . + 0 ID=cds-WP_060073823.1;Parent=gene-LDO49_RS06400;Dbxref=GenBank:WP_060073823.1;Name=WP_060073823.1;Ontology_term=GO:0042158,GO:0008961,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548463.1;locus_tag=LDO49_RS06400;product=TlpA disulfide reductase family protein;protein_id=WP_060073823.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 114592 114786 . + . ID=gene-LDO49_RS37825;Name=LDO49_RS37825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37825 NZ_CAJZAV010000035.1 Protein Homology CDS 114592 114786 . + 0 ID=cds-WP_226167818.1;Parent=gene-LDO49_RS37825;Dbxref=GenBank:WP_226167818.1;Name=WP_226167818.1;Ontology_term=GO:0016070,GO:0003723,GO:0016788,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489562.1;locus_tag=LDO49_RS37825;product=SymE family type I addiction module toxin;protein_id=WP_226167818.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 114783 115103 . + . ID=gene-LDO49_RS06410;Name=LDO49_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06410;old_locus_tag=BCEP4_130125 NZ_CAJZAV010000035.1 Protein Homology CDS 114783 115103 . + 0 ID=cds-WP_059709262.1;Parent=gene-LDO49_RS06410;Dbxref=GenBank:WP_059709262.1;Name=WP_059709262.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489543.1;locus_tag=LDO49_RS06410;product=helix-turn-helix domain-containing protein;protein_id=WP_059709262.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 115195 115599 . - . ID=gene-LDO49_RS06415;Name=LDO49_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06415;old_locus_tag=BCEP4_130126 NZ_CAJZAV010000035.1 Protein Homology CDS 115195 115599 . - 0 ID=cds-WP_021160608.1;Parent=gene-LDO49_RS06415;Dbxref=GenBank:WP_021160608.1;Name=WP_021160608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756235.1;locus_tag=LDO49_RS06415;product=hypothetical protein;protein_id=WP_021160608.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 115864 117450 . - . ID=gene-LDO49_RS06420;Name=LDO49_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06420;old_locus_tag=BCEP4_130128 NZ_CAJZAV010000035.1 Protein Homology CDS 115864 117450 . - 0 ID=cds-WP_060073816.1;Parent=gene-LDO49_RS06420;Dbxref=GenBank:WP_060073816.1;Name=WP_060073816.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338920.1;locus_tag=LDO49_RS06420;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_060073816.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 117447 118565 . - . ID=gene-LDO49_RS06425;Name=LDO49_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06425;old_locus_tag=BCEP4_130129 NZ_CAJZAV010000035.1 Protein Homology CDS 117447 118565 . - 0 ID=cds-WP_059488562.1;Parent=gene-LDO49_RS06425;Dbxref=GenBank:WP_059488562.1;Name=WP_059488562.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484858.1;locus_tag=LDO49_RS06425;product=HlyD family secretion protein;protein_id=WP_059488562.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 118613 120037 . - . ID=gene-LDO49_RS06430;Name=LDO49_RS06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06430;old_locus_tag=BCEP4_130130 NZ_CAJZAV010000035.1 Protein Homology CDS 118613 120037 . - 0 ID=cds-WP_124843563.1;Parent=gene-LDO49_RS06430;Dbxref=GenBank:WP_124843563.1;Name=WP_124843563.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356519.1;locus_tag=LDO49_RS06430;product=efflux transporter outer membrane subunit;protein_id=WP_124843563.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 120232 121005 . + . ID=gene-LDO49_RS06435;Name=LDO49_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06435;old_locus_tag=BCEP4_130131 NZ_CAJZAV010000035.1 Protein Homology CDS 120232 121005 . + 0 ID=cds-WP_059587089.1;Parent=gene-LDO49_RS06435;Dbxref=GenBank:WP_059587089.1;Name=WP_059587089.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494477.1;locus_tag=LDO49_RS06435;product=AraC family transcriptional regulator;protein_id=WP_059587089.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 121101 122810 . - . ID=gene-LDO49_RS06440;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=LDO49_RS06440;old_locus_tag=BCEP4_130132 NZ_CAJZAV010000035.1 Protein Homology CDS 121101 122810 . - 0 ID=cds-WP_042975707.1;Parent=gene-LDO49_RS06440;Dbxref=GenBank:WP_042975707.1;Name=WP_042975707.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338929.1;locus_tag=LDO49_RS06440;product=2-isopropylmalate synthase;protein_id=WP_042975707.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 123771 124160 . + . ID=gene-LDO49_RS06445;Name=LDO49_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06445;old_locus_tag=BCEP4_130133 NZ_CAJZAV010000035.1 Protein Homology CDS 123771 124160 . + 0 ID=cds-WP_021160613.1;Parent=gene-LDO49_RS06445;Dbxref=GenBank:WP_021160613.1;Name=WP_021160613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404505.1;locus_tag=LDO49_RS06445;product=fucose-binding lectin II;protein_id=WP_021160613.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 124285 125094 . + . ID=gene-LDO49_RS06450;Name=LDO49_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06450;old_locus_tag=BCEP4_130134 NZ_CAJZAV010000035.1 Protein Homology CDS 124285 125094 . + 0 ID=cds-WP_224051537.1;Parent=gene-LDO49_RS06450;Dbxref=GenBank:WP_224051537.1;Name=WP_224051537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490828.1;locus_tag=LDO49_RS06450;product=fucose-binding lectin II;protein_id=WP_224051537.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 125247 126092 . + . ID=gene-LDO49_RS06455;Name=LDO49_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06455;old_locus_tag=BCEP4_130135 NZ_CAJZAV010000035.1 Protein Homology CDS 125247 126092 . + 0 ID=cds-WP_224051538.1;Parent=gene-LDO49_RS06455;Dbxref=GenBank:WP_224051538.1;Name=WP_224051538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356528.1;locus_tag=LDO49_RS06455;product=AraC family transcriptional regulator;protein_id=WP_224051538.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq pseudogene 126265 126474 . - . ID=gene-LDO49_RS37830;Name=LDO49_RS37830;end_range=126474,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37830;partial=true;pseudo=true;start_range=.,126265 NZ_CAJZAV010000035.1 Protein Homology CDS 126265 126474 . - 0 ID=cds-LDO49_RS37830;Parent=gene-LDO49_RS37830;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004519,GO:0090729,GO:0110001;end_range=126474,.;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014190230.1;locus_tag=LDO49_RS37830;partial=true;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;start_range=.,126265;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 126704 128068 . - . ID=gene-LDO49_RS06465;Name=LDO49_RS06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06465;old_locus_tag=BCEP4_130137 NZ_CAJZAV010000035.1 Protein Homology CDS 126704 128068 . - 0 ID=cds-WP_224051540.1;Parent=gene-LDO49_RS06465;Dbxref=GenBank:WP_224051540.1;Name=WP_224051540.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494489.1;locus_tag=LDO49_RS06465;product=M23 family metallopeptidase;protein_id=WP_224051540.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 128409 129278 . + . ID=gene-LDO49_RS06470;Name=LDO49_RS06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06470;old_locus_tag=BCEP4_130138 NZ_CAJZAV010000035.1 Protein Homology CDS 128409 129278 . + 0 ID=cds-WP_224051541.1;Parent=gene-LDO49_RS06470;Dbxref=GenBank:WP_224051541.1;Name=WP_224051541.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338932.1;locus_tag=LDO49_RS06470;product=mechanosensitive ion channel family protein;protein_id=WP_224051541.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 129359 130501 . - . ID=gene-LDO49_RS06475;Name=LDO49_RS06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06475;old_locus_tag=BCEP4_130139 NZ_CAJZAV010000035.1 Protein Homology CDS 129359 130501 . - 0 ID=cds-WP_224051542.1;Parent=gene-LDO49_RS06475;Dbxref=GenBank:WP_224051542.1;Name=WP_224051542.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490823.1;locus_tag=LDO49_RS06475;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_224051542.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 130571 131608 . - . ID=gene-LDO49_RS06480;Name=LDO49_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06480;old_locus_tag=BCEP4_130140 NZ_CAJZAV010000035.1 Protein Homology CDS 130571 131608 . - 0 ID=cds-WP_224051543.1;Parent=gene-LDO49_RS06480;Dbxref=GenBank:WP_224051543.1;Name=WP_224051543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881248.1;locus_tag=LDO49_RS06480;product=histone deacetylase family protein;protein_id=WP_224051543.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 131724 132212 . + . ID=gene-LDO49_RS06485;Name=LDO49_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06485;old_locus_tag=BCEP4_130141 NZ_CAJZAV010000035.1 Protein Homology CDS 131724 132212 . + 0 ID=cds-WP_059489442.1;Parent=gene-LDO49_RS06485;Dbxref=GenBank:WP_059489442.1;Name=WP_059489442.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365166.1;locus_tag=LDO49_RS06485;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_059489442.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 132278 132565 . + . ID=gene-LDO49_RS06490;Name=LDO49_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06490;old_locus_tag=BCEP4_130142 NZ_CAJZAV010000035.1 Protein Homology CDS 132278 132565 . + 0 ID=cds-WP_048021384.1;Parent=gene-LDO49_RS06490;Dbxref=GenBank:WP_048021384.1;Name=WP_048021384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483262.1;locus_tag=LDO49_RS06490;product=hypothetical protein;protein_id=WP_048021384.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 133088 134749 . + . ID=gene-LDO49_RS06495;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=LDO49_RS06495;old_locus_tag=BCEP4_130143 NZ_CAJZAV010000035.1 Protein Homology CDS 133088 134749 . + 0 ID=cds-WP_224051544.1;Parent=gene-LDO49_RS06495;Dbxref=GenBank:WP_224051544.1;Name=WP_224051544.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356540.1;locus_tag=LDO49_RS06495;product=malate dehydrogenase (quinone);protein_id=WP_224051544.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 134781 135041 . - . ID=gene-LDO49_RS06500;Name=LDO49_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06500;old_locus_tag=BCEP4_130144 NZ_CAJZAV010000035.1 GeneMarkS-2+ CDS 134781 135041 . - 0 ID=cds-WP_124469656.1;Parent=gene-LDO49_RS06500;Dbxref=GenBank:WP_124469656.1;Name=WP_124469656.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS06500;product=hypothetical protein;protein_id=WP_124469656.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 135265 135522 . - . ID=gene-LDO49_RS06505;Name=LDO49_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06505;old_locus_tag=BCEP4_130145 NZ_CAJZAV010000035.1 Protein Homology CDS 135265 135522 . - 0 ID=cds-WP_059553755.1;Parent=gene-LDO49_RS06505;Dbxref=GenBank:WP_059553755.1;Name=WP_059553755.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012405343.1;locus_tag=LDO49_RS06505;product=PAAR domain-containing protein;protein_id=WP_059553755.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 135545 136204 . - . ID=gene-LDO49_RS06510;Name=LDO49_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06510;old_locus_tag=BCEP4_130146 NZ_CAJZAV010000035.1 GeneMarkS-2+ CDS 135545 136204 . - 0 ID=cds-WP_224051545.1;Parent=gene-LDO49_RS06510;Dbxref=GenBank:WP_224051545.1;Name=WP_224051545.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS06510;product=hypothetical protein;protein_id=WP_224051545.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 136304 137191 . - . ID=gene-LDO49_RS06515;Name=LDO49_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06515;old_locus_tag=BCEP4_130147 NZ_CAJZAV010000035.1 GeneMarkS-2+ CDS 136304 137191 . - 0 ID=cds-WP_185735151.1;Parent=gene-LDO49_RS06515;Dbxref=GenBank:WP_185735151.1;Name=WP_185735151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS06515;product=hypothetical protein;protein_id=WP_185735151.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 137196 138071 . - . ID=gene-LDO49_RS06520;Name=LDO49_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06520;old_locus_tag=BCEP4_130148 NZ_CAJZAV010000035.1 Protein Homology CDS 137196 138071 . - 0 ID=cds-WP_060148419.1;Parent=gene-LDO49_RS06520;Dbxref=GenBank:WP_060148419.1;Name=WP_060148419.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042867.4;locus_tag=LDO49_RS06520;product=DUF6708 domain-containing protein;protein_id=WP_060148419.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 138076 138930 . - . ID=gene-LDO49_RS06525;Name=LDO49_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06525;old_locus_tag=BCEP4_130149 NZ_CAJZAV010000035.1 GeneMarkS-2+ CDS 138076 138930 . - 0 ID=cds-WP_224051546.1;Parent=gene-LDO49_RS06525;Dbxref=GenBank:WP_224051546.1;Name=WP_224051546.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS06525;product=hypothetical protein;protein_id=WP_224051546.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 138935 140155 . - . ID=gene-LDO49_RS06530;Name=LDO49_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06530;old_locus_tag=BCEP4_130150 NZ_CAJZAV010000035.1 GeneMarkS-2+ CDS 138935 140155 . - 0 ID=cds-WP_443797918.1;Parent=gene-LDO49_RS06530;Dbxref=GenBank:WP_443797918.1;Name=WP_443797918.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS06530;product=hypothetical protein;protein_id=WP_443797918.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 140106 141938 . - . ID=gene-LDO49_RS06535;Name=LDO49_RS06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06535;old_locus_tag=BCEP4_130151 NZ_CAJZAV010000035.1 Protein Homology CDS 140106 141938 . - 0 ID=cds-WP_224051548.1;Parent=gene-LDO49_RS06535;Dbxref=GenBank:WP_224051548.1;Name=WP_224051548.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF041559.1;locus_tag=LDO49_RS06535;product=T6SS effector BTH_I2691 family protein;protein_id=WP_224051548.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq gene 141931 142881 . - . ID=gene-LDO49_RS06540;Name=LDO49_RS06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06540;old_locus_tag=BCEP4_130152 NZ_CAJZAV010000035.1 Protein Homology CDS 141931 142881 . - 0 ID=cds-WP_059676324.1;Parent=gene-LDO49_RS06540;Dbxref=GenBank:WP_059676324.1;Name=WP_059676324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008167167.1;locus_tag=LDO49_RS06540;product=DUF4123 domain-containing protein;protein_id=WP_059676324.1;transl_table=11 NZ_CAJZAV010000035.1 RefSeq pseudogene 142878 143151 . - . ID=gene-LDO49_RS06545;Name=LDO49_RS06545;end_range=143151,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS06545;partial=true;pseudo=true NZ_CAJZAV010000035.1 Protein Homology CDS 142878 143151 . - 1 ID=cds-LDO49_RS06545;Parent=gene-LDO49_RS06545;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=143151,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008167165.1;locus_tag=LDO49_RS06545;partial=true;product=type VI secretion system Vgr family protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000036.1 1 64615 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000036.1 RefSeq region 1 64615 . + . ID=NZ_CAJZAV010000036.1:1..64615;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_130 NZ_CAJZAV010000036.1 RefSeq pseudogene 1 122 . + . ID=gene-LDO49_RS06550;Name=LDO49_RS06550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS06550;old_locus_tag=BCEP4_1300001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000036.1 Protein Homology CDS 1 122 . + 2 ID=cds-LDO49_RS06550;Parent=gene-LDO49_RS06550;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352932.1;locus_tag=LDO49_RS06550;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 228 1157 . - . ID=gene-LDO49_RS06555;Name=LDO49_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06555;old_locus_tag=BCEP4_1300002 NZ_CAJZAV010000036.1 Protein Homology CDS 228 1157 . - 0 ID=cds-WP_048022592.1;Parent=gene-LDO49_RS06555;Dbxref=GenBank:WP_048022592.1;Name=WP_048022592.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212875.1;locus_tag=LDO49_RS06555;product=LysR family transcriptional regulator;protein_id=WP_048022592.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 1362 2135 . - . ID=gene-LDO49_RS06560;Name=LDO49_RS06560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06560;old_locus_tag=BCEP4_1300003 NZ_CAJZAV010000036.1 Protein Homology CDS 1362 2135 . - 0 ID=cds-WP_021160770.1;Parent=gene-LDO49_RS06560;Dbxref=GenBank:WP_021160770.1;Name=WP_021160770.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090962.1;locus_tag=LDO49_RS06560;product=SDR family oxidoreductase;protein_id=WP_021160770.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 2315 2815 . - . ID=gene-LDO49_RS06565;Name=LDO49_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06565;old_locus_tag=BCEP4_1300005 NZ_CAJZAV010000036.1 Protein Homology CDS 2315 2815 . - 0 ID=cds-WP_059590505.1;Parent=gene-LDO49_RS06565;Dbxref=GenBank:WP_059590505.1;Name=WP_059590505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545997.1;locus_tag=LDO49_RS06565;product=DinB family protein;protein_id=WP_059590505.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 2884 3258 . - . ID=gene-LDO49_RS06570;Name=copC;gbkey=Gene;gene=copC;gene_biotype=protein_coding;locus_tag=LDO49_RS06570;old_locus_tag=BCEP4_1300006 NZ_CAJZAV010000036.1 Protein Homology CDS 2884 3258 . - 0 ID=cds-WP_224051558.1;Parent=gene-LDO49_RS06570;Dbxref=GenBank:WP_224051558.1;Name=WP_224051558.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507,GO:0042597;gbkey=CDS;gene=copC;go_component=periplasmic space|0042597||IEA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545998.1;locus_tag=LDO49_RS06570;product=copper homeostasis periplasmic binding protein CopC;protein_id=WP_224051558.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 3373 4089 . + . ID=gene-LDO49_RS06575;Name=LDO49_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06575;old_locus_tag=BCEP4_1300007 NZ_CAJZAV010000036.1 Protein Homology CDS 3373 4089 . + 0 ID=cds-WP_048022595.1;Parent=gene-LDO49_RS06575;Dbxref=GenBank:WP_048022595.1;Name=WP_048022595.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0140098;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,catalytic activity%2C acting on RNA|0140098||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896298.1;locus_tag=LDO49_RS06575;product=pseudouridine synthase;protein_id=WP_048022595.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 4196 4384 . + . ID=gene-LDO49_RS06580;Name=LDO49_RS06580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06580;old_locus_tag=BCEP4_1300008 NZ_CAJZAV010000036.1 Protein Homology CDS 4196 4384 . + 0 ID=cds-WP_021160766.1;Parent=gene-LDO49_RS06580;Dbxref=GenBank:WP_021160766.1;Name=WP_021160766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546000.1;locus_tag=LDO49_RS06580;product=hypothetical protein;protein_id=WP_021160766.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 4367 5404 . - . ID=gene-LDO49_RS06585;Name=LDO49_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06585;old_locus_tag=BCEP4_1300009 NZ_CAJZAV010000036.1 Protein Homology CDS 4367 5404 . - 0 ID=cds-WP_224051559.1;Parent=gene-LDO49_RS06585;Dbxref=GenBank:WP_224051559.1;Name=WP_224051559.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492821.1;locus_tag=LDO49_RS06585;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_224051559.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 5512 6543 . + . ID=gene-LDO49_RS06590;Name=LDO49_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06590;old_locus_tag=BCEP4_1300010 NZ_CAJZAV010000036.1 Protein Homology CDS 5512 6543 . + 0 ID=cds-WP_224051560.1;Parent=gene-LDO49_RS06590;Dbxref=GenBank:WP_224051560.1;Name=WP_224051560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413312.1;locus_tag=LDO49_RS06590;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;protein_id=WP_224051560.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 6829 8013 . + . ID=gene-LDO49_RS06595;Name=LDO49_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06595;old_locus_tag=BCEP4_1300011 NZ_CAJZAV010000036.1 Protein Homology CDS 6829 8013 . + 0 ID=cds-WP_060049612.1;Parent=gene-LDO49_RS06595;Dbxref=GenBank:WP_060049612.1;Name=WP_060049612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522595.1;locus_tag=LDO49_RS06595;product=acetylornithine transaminase;protein_id=WP_060049612.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 8027 8482 . + . ID=gene-LDO49_RS06600;Name=LDO49_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06600;old_locus_tag=BCEP4_1300012 NZ_CAJZAV010000036.1 Protein Homology CDS 8027 8482 . + 0 ID=cds-WP_124475383.1;Parent=gene-LDO49_RS06600;Dbxref=GenBank:WP_124475383.1;Name=WP_124475383.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757315.1;locus_tag=LDO49_RS06600;product=GNAT family acetyltransferase;protein_id=WP_124475383.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 8507 9178 . - . ID=gene-LDO49_RS06605;Name=LDO49_RS06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06605;old_locus_tag=BCEP4_1300013 NZ_CAJZAV010000036.1 Protein Homology CDS 8507 9178 . - 0 ID=cds-WP_124475382.1;Parent=gene-LDO49_RS06605;Dbxref=GenBank:WP_124475382.1;Name=WP_124475382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750045.1;locus_tag=LDO49_RS06605;product=DUF2278 family protein;protein_id=WP_124475382.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 9480 10196 . - . ID=gene-LDO49_RS06610;Name=LDO49_RS06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06610;old_locus_tag=BCEP4_1300014 NZ_CAJZAV010000036.1 Protein Homology CDS 9480 10196 . - 0 ID=cds-WP_042975782.1;Parent=gene-LDO49_RS06610;Dbxref=GenBank:WP_042975782.1;Name=WP_042975782.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478054.1;locus_tag=LDO49_RS06610;product=ABC transporter ATP-binding protein;protein_id=WP_042975782.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 10196 10972 . - . ID=gene-LDO49_RS06615;Name=LDO49_RS06615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06615;old_locus_tag=BCEP4_1300015 NZ_CAJZAV010000036.1 Protein Homology CDS 10196 10972 . - 0 ID=cds-WP_021160760.1;Parent=gene-LDO49_RS06615;Dbxref=GenBank:WP_021160760.1;Name=WP_021160760.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008351156.1;locus_tag=LDO49_RS06615;product=ABC transporter ATP-binding protein;protein_id=WP_021160760.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 10997 12166 . - . ID=gene-LDO49_RS06620;Name=LDO49_RS06620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06620;old_locus_tag=BCEP4_1300016 NZ_CAJZAV010000036.1 Protein Homology CDS 10997 12166 . - 0 ID=cds-WP_027786675.1;Parent=gene-LDO49_RS06620;Dbxref=GenBank:WP_027786675.1;Name=WP_027786675.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478052.1;locus_tag=LDO49_RS06620;product=ABC transporter permease subunit;protein_id=WP_027786675.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 12185 13135 . - . ID=gene-LDO49_RS06625;Name=LDO49_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06625;old_locus_tag=BCEP4_1300017 NZ_CAJZAV010000036.1 Protein Homology CDS 12185 13135 . - 0 ID=cds-WP_021160758.1;Parent=gene-LDO49_RS06625;Dbxref=GenBank:WP_021160758.1;Name=WP_021160758.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885761.1;locus_tag=LDO49_RS06625;product=branched-chain amino acid ABC transporter permease;protein_id=WP_021160758.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 13347 14024 . - . ID=gene-LDO49_RS06630;Name=LDO49_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06630;old_locus_tag=BCEP4_1300018 NZ_CAJZAV010000036.1 Protein Homology CDS 13347 14024 . - 0 ID=cds-WP_124475381.1;Parent=gene-LDO49_RS06630;Dbxref=GenBank:WP_124475381.1;Name=WP_124475381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329064.1;locus_tag=LDO49_RS06630;product=amino acid-binding protein;protein_id=WP_124475381.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 14295 15275 . - . ID=gene-LDO49_RS06635;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=LDO49_RS06635;old_locus_tag=BCEP4_1300019 NZ_CAJZAV010000036.1 Protein Homology CDS 14295 15275 . - 0 ID=cds-WP_021160756.1;Parent=gene-LDO49_RS06635;Dbxref=GenBank:WP_021160756.1;Name=WP_021160756.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892570.1;locus_tag=LDO49_RS06635;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_021160756.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 15278 15733 . - . ID=gene-LDO49_RS06640;Name=LDO49_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06640;old_locus_tag=BCEP4_1300020 NZ_CAJZAV010000036.1 Protein Homology CDS 15278 15733 . - 0 ID=cds-WP_124475380.1;Parent=gene-LDO49_RS06640;Dbxref=GenBank:WP_124475380.1;Name=WP_124475380.1;Ontology_term=GO:0006457,GO:0003755,GO:0046872;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,metal ion binding|0046872||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892571.1;locus_tag=LDO49_RS06640;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_124475380.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 15869 16642 . + . ID=gene-LDO49_RS06645;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=LDO49_RS06645;old_locus_tag=BCEP4_1300021 NZ_CAJZAV010000036.1 Protein Homology CDS 15869 16642 . + 0 ID=cds-WP_124475379.1;Parent=gene-LDO49_RS06645;Dbxref=GenBank:WP_124475379.1;Name=WP_124475379.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496138.1;locus_tag=LDO49_RS06645;product=RadC family protein;protein_id=WP_124475379.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 16880 17113 . + . ID=gene-LDO49_RS06650;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=LDO49_RS06650;old_locus_tag=BCEP4_1300022 NZ_CAJZAV010000036.1 Protein Homology CDS 16880 17113 . + 0 ID=cds-WP_004186391.1;Parent=gene-LDO49_RS06650;Dbxref=GenBank:WP_004186391.1;Name=WP_004186391.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007586227.1;locus_tag=LDO49_RS06650;product=50S ribosomal protein L28;protein_id=WP_004186391.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 17131 17298 . + . ID=gene-LDO49_RS06655;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=LDO49_RS06655;old_locus_tag=BCEP4_1300023 NZ_CAJZAV010000036.1 Protein Homology CDS 17131 17298 . + 0 ID=cds-WP_006478046.1;Parent=gene-LDO49_RS06655;Dbxref=GenBank:WP_006478046.1;Name=WP_006478046.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180630.1;locus_tag=LDO49_RS06655;product=50S ribosomal protein L33;protein_id=WP_006478046.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 17459 19045 . + . ID=gene-LDO49_RS06660;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=LDO49_RS06660;old_locus_tag=BCEP4_1300024 NZ_CAJZAV010000036.1 Protein Homology CDS 17459 19045 . + 0 ID=cds-WP_021160752.1;Parent=gene-LDO49_RS06660;Dbxref=GenBank:WP_021160752.1;Name=WP_021160752.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885766.1;locus_tag=LDO49_RS06660;product=L-aspartate oxidase;protein_id=WP_021160752.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 19136 20020 . - . ID=gene-LDO49_RS06665;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=LDO49_RS06665;old_locus_tag=BCEP4_1300025 NZ_CAJZAV010000036.1 Protein Homology CDS 19136 20020 . - 0 ID=cds-WP_060229174.1;Parent=gene-LDO49_RS06665;Dbxref=GenBank:WP_060229174.1;Name=WP_060229174.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329065.1;locus_tag=LDO49_RS06665;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_060229174.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 20017 21153 . - . ID=gene-LDO49_RS06670;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=LDO49_RS06670;old_locus_tag=BCEP4_1300026 NZ_CAJZAV010000036.1 Protein Homology CDS 20017 21153 . - 0 ID=cds-WP_021160750.1;Parent=gene-LDO49_RS06670;Dbxref=GenBank:WP_021160750.1;Name=WP_021160750.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329066.1;locus_tag=LDO49_RS06670;product=quinolinate synthase NadA;protein_id=WP_021160750.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 21505 22698 . - . ID=gene-LDO49_RS06675;Name=LDO49_RS06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06675;old_locus_tag=BCEP4_1300027 NZ_CAJZAV010000036.1 Protein Homology CDS 21505 22698 . - 0 ID=cds-WP_027786669.1;Parent=gene-LDO49_RS06675;Dbxref=GenBank:WP_027786669.1;Name=WP_027786669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012434118.1;locus_tag=LDO49_RS06675;product=DesA family fatty acid desaturase;protein_id=WP_027786669.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 22920 24284 . - . ID=gene-LDO49_RS06680;Name=LDO49_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06680;old_locus_tag=BCEP4_1300028 NZ_CAJZAV010000036.1 Protein Homology CDS 22920 24284 . - 0 ID=cds-WP_224051561.1;Parent=gene-LDO49_RS06680;Dbxref=GenBank:WP_224051561.1;Name=WP_224051561.1;Ontology_term=GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760013.1;locus_tag=LDO49_RS06680;product=mechanosensitive ion channel family protein;protein_id=WP_224051561.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 24303 25568 . - . ID=gene-LDO49_RS06685;Name=LDO49_RS06685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06685;old_locus_tag=BCEP4_1300029 NZ_CAJZAV010000036.1 Protein Homology CDS 24303 25568 . - 0 ID=cds-WP_021160747.1;Parent=gene-LDO49_RS06685;Dbxref=GenBank:WP_021160747.1;Name=WP_021160747.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546011.1;locus_tag=LDO49_RS06685;product=RsmB/NOP family class I SAM-dependent RNA methyltransferase;protein_id=WP_021160747.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 25565 26227 . - . ID=gene-LDO49_RS06690;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=LDO49_RS06690;old_locus_tag=BCEP4_1300030 NZ_CAJZAV010000036.1 Protein Homology CDS 25565 26227 . - 0 ID=cds-WP_021160746.1;Parent=gene-LDO49_RS06690;Dbxref=GenBank:WP_021160746.1;Name=WP_021160746.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892597.1;locus_tag=LDO49_RS06690;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_021160746.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 26350 27342 . + . ID=gene-LDO49_RS06695;Name=LDO49_RS06695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06695;old_locus_tag=BCEP4_1300031 NZ_CAJZAV010000036.1 Protein Homology CDS 26350 27342 . + 0 ID=cds-WP_021160745.1;Parent=gene-LDO49_RS06695;Dbxref=GenBank:WP_021160745.1;Name=WP_021160745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750061.1;locus_tag=LDO49_RS06695;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_021160745.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 27445 30282 . + . ID=gene-LDO49_RS06700;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=LDO49_RS06700;old_locus_tag=BCEP4_1300032 NZ_CAJZAV010000036.1 Protein Homology CDS 27445 30282 . + 0 ID=cds-WP_060069706.1;Parent=gene-LDO49_RS06700;Dbxref=GenBank:WP_060069706.1;Name=WP_060069706.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352960.1;locus_tag=LDO49_RS06700;product=isoleucine--tRNA ligase;protein_id=WP_060069706.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 30285 30785 . + . ID=gene-LDO49_RS06705;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=LDO49_RS06705;old_locus_tag=BCEP4_1300033 NZ_CAJZAV010000036.1 Protein Homology CDS 30285 30785 . + 0 ID=cds-WP_021160743.1;Parent=gene-LDO49_RS06705;Dbxref=GenBank:WP_021160743.1;Name=WP_021160743.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333949.1;locus_tag=LDO49_RS06705;product=signal peptidase II;protein_id=WP_021160743.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 30853 32064 . + . ID=gene-LDO49_RS06710;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=LDO49_RS06710;old_locus_tag=BCEP4_1300034 NZ_CAJZAV010000036.1 Protein Homology CDS 30853 32064 . + 0 ID=cds-WP_059484688.1;Parent=gene-LDO49_RS06710;Dbxref=GenBank:WP_059484688.1;Name=WP_059484688.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851204.1;locus_tag=LDO49_RS06710;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_059484688.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 32120 32566 . + . ID=gene-LDO49_RS06715;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=LDO49_RS06715;old_locus_tag=BCEP4_1300035 NZ_CAJZAV010000036.1 Protein Homology CDS 32120 32566 . + 0 ID=cds-WP_021160741.1;Parent=gene-LDO49_RS06715;Dbxref=GenBank:WP_021160741.1;Name=WP_021160741.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602380.1;locus_tag=LDO49_RS06715;product=dUTP diphosphatase;protein_id=WP_021160741.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 32619 33389 . - . ID=gene-LDO49_RS06720;Name=LDO49_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06720;old_locus_tag=BCEP4_1300036 NZ_CAJZAV010000036.1 Protein Homology CDS 32619 33389 . - 0 ID=cds-WP_060069860.1;Parent=gene-LDO49_RS06720;Dbxref=GenBank:WP_060069860.1;Name=WP_060069860.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405886.1;locus_tag=LDO49_RS06720;product=COG4705 family protein;protein_id=WP_060069860.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 33528 34907 . - . ID=gene-LDO49_RS06725;Name=LDO49_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06725;old_locus_tag=BCEP4_1300037 NZ_CAJZAV010000036.1 Protein Homology CDS 33528 34907 . - 0 ID=cds-WP_060069709.1;Parent=gene-LDO49_RS06725;Dbxref=GenBank:WP_060069709.1;Name=WP_060069709.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488957.1;locus_tag=LDO49_RS06725;product=amino acid permease;protein_id=WP_060069709.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 35011 37311 . - . ID=gene-LDO49_RS06730;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=LDO49_RS06730;old_locus_tag=BCEP4_1300038 NZ_CAJZAV010000036.1 Protein Homology CDS 35011 37311 . - 0 ID=cds-WP_021160738.1;Parent=gene-LDO49_RS06730;Dbxref=GenBank:WP_021160738.1;Name=WP_021160738.1;Ontology_term=GO:0006508,GO:0043335,GO:0004176,GO:0016887,GO:0009368;gbkey=CDS;gene=clpA;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546019.1;locus_tag=LDO49_RS06730;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_021160738.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 37308 37622 . - . ID=gene-LDO49_RS06735;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=LDO49_RS06735;old_locus_tag=BCEP4_1300039 NZ_CAJZAV010000036.1 Protein Homology CDS 37308 37622 . - 0 ID=cds-WP_006398529.1;Parent=gene-LDO49_RS06735;Dbxref=GenBank:WP_006398529.1;Name=WP_006398529.1;gbkey=CDS;gene=clpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012080368.1;locus_tag=LDO49_RS06735;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_006398529.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 38168 38371 . + . ID=gene-LDO49_RS06740;Name=LDO49_RS06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06740;old_locus_tag=BCEP4_1300041 NZ_CAJZAV010000036.1 Protein Homology CDS 38168 38371 . + 0 ID=cds-WP_006488945.1;Parent=gene-LDO49_RS06740;Dbxref=GenBank:WP_006488945.1;Name=WP_006488945.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488945.1;locus_tag=LDO49_RS06740;product=cold-shock protein;protein_id=WP_006488945.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 38554 40170 . - . ID=gene-LDO49_RS06745;Name=LDO49_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06745;old_locus_tag=BCEP4_1300042 NZ_CAJZAV010000036.1 Protein Homology CDS 38554 40170 . - 0 ID=cds-WP_224051562.1;Parent=gene-LDO49_RS06745;Dbxref=GenBank:WP_224051562.1;Name=WP_224051562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546020.1;locus_tag=LDO49_RS06745;product=multicopper oxidase family protein;protein_id=WP_224051562.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 40843 41067 . + . ID=gene-LDO49_RS06750;Name=LDO49_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06750;old_locus_tag=BCEP4_1300043 NZ_CAJZAV010000036.1 Protein Homology CDS 40843 41067 . + 0 ID=cds-WP_006490888.1;Parent=gene-LDO49_RS06750;Dbxref=GenBank:WP_006490888.1;Name=WP_006490888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478028.1;locus_tag=LDO49_RS06750;product=hypothetical protein;protein_id=WP_006490888.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 41191 43419 . - . ID=gene-LDO49_RS06755;Name=LDO49_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06755;old_locus_tag=BCEP4_1300045 NZ_CAJZAV010000036.1 Protein Homology CDS 41191 43419 . - 0 ID=cds-WP_042977826.1;Parent=gene-LDO49_RS06755;Dbxref=GenBank:WP_042977826.1;Name=WP_042977826.1;Ontology_term=GO:0006099,GO:0004450;gbkey=CDS;go_function=isocitrate dehydrogenase (NADP+) activity|0004450||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723497.1;locus_tag=LDO49_RS06755;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_042977826.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 43700 44956 . - . ID=gene-LDO49_RS06760;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=LDO49_RS06760;old_locus_tag=BCEP4_1300046 NZ_CAJZAV010000036.1 Protein Homology CDS 43700 44956 . - 0 ID=cds-WP_006478026.1;Parent=gene-LDO49_RS06760;Dbxref=GenBank:WP_006478026.1;Name=WP_006478026.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069124.1;locus_tag=LDO49_RS06760;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_006478026.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 45234 45812 . + . ID=gene-LDO49_RS06765;Name=LDO49_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06765;old_locus_tag=BCEP4_1300048 NZ_CAJZAV010000036.1 Protein Homology CDS 45234 45812 . + 0 ID=cds-WP_021163328.1;Parent=gene-LDO49_RS06765;Dbxref=GenBank:WP_021163328.1;Name=WP_021163328.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0016866;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,intramolecular transferase activity|0016866||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352969.1;locus_tag=LDO49_RS06765;product=pseudouridine synthase;protein_id=WP_021163328.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 46093 46308 . + . ID=gene-LDO49_RS06770;Name=LDO49_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06770;old_locus_tag=BCEP4_1300050 NZ_CAJZAV010000036.1 Protein Homology CDS 46093 46308 . + 0 ID=cds-WP_011352970.1;Parent=gene-LDO49_RS06770;Dbxref=GenBank:WP_011352970.1;Name=WP_011352970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398520.1;locus_tag=LDO49_RS06770;product=hypothetical protein;protein_id=WP_011352970.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 46469 46969 . + . ID=gene-LDO49_RS06775;Name=LDO49_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06775;old_locus_tag=BCEP4_1300051 NZ_CAJZAV010000036.1 Protein Homology CDS 46469 46969 . + 0 ID=cds-WP_027786657.1;Parent=gene-LDO49_RS06775;Dbxref=GenBank:WP_027786657.1;Name=WP_027786657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333961.1;locus_tag=LDO49_RS06775;product=DUF192 domain-containing protein;protein_id=WP_027786657.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 47209 49320 . + . ID=gene-LDO49_RS06780;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=LDO49_RS06780;old_locus_tag=BCEP4_1300052 NZ_CAJZAV010000036.1 Protein Homology CDS 47209 49320 . + 0 ID=cds-WP_060069712.1;Parent=gene-LDO49_RS06780;Dbxref=GenBank:WP_060069712.1;Name=WP_060069712.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329077.1;locus_tag=LDO49_RS06780;product=elongation factor G;protein_id=WP_060069712.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 49484 50500 . + . ID=gene-LDO49_RS06785;Name=LDO49_RS06785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06785;old_locus_tag=BCEP4_1300053 NZ_CAJZAV010000036.1 Protein Homology CDS 49484 50500 . + 0 ID=cds-WP_021163324.1;Parent=gene-LDO49_RS06785;Dbxref=GenBank:WP_021163324.1;Name=WP_021163324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496148.1;locus_tag=LDO49_RS06785;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_021163324.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 51291 51878 . + . ID=gene-LDO49_RS37835;Name=LDO49_RS37835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37835;partial=true;start_range=.,51291 NZ_CAJZAV010000036.1 Protein Homology CDS 51291 51878 . + 0 ID=cds-WP_443797919.1;Parent=gene-LDO49_RS37835;Dbxref=GenBank:WP_443797919.1;Name=WP_443797919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546027.1;locus_tag=LDO49_RS37835;partial=true;product=hypothetical protein;protein_id=WP_443797919.1;start_range=.,51291;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 51906 52751 . - . ID=gene-LDO49_RS06795;Name=LDO49_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06795;old_locus_tag=BCEP4_1300055 NZ_CAJZAV010000036.1 Protein Homology CDS 51906 52751 . - 0 ID=cds-WP_060069714.1;Parent=gene-LDO49_RS06795;Dbxref=GenBank:WP_060069714.1;Name=WP_060069714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398516.1;locus_tag=LDO49_RS06795;product=aldo/keto reductase;protein_id=WP_060069714.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 52918 53664 . + . ID=gene-LDO49_RS06800;Name=LDO49_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06800;old_locus_tag=BCEP4_1300056 NZ_CAJZAV010000036.1 Protein Homology CDS 52918 53664 . + 0 ID=cds-WP_021156386.1;Parent=gene-LDO49_RS06800;Dbxref=GenBank:WP_021156386.1;Name=WP_021156386.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185897.1;locus_tag=LDO49_RS06800;product=GntR family transcriptional regulator;protein_id=WP_021156386.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 53686 55077 . - . ID=gene-LDO49_RS06805;Name=LDO49_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06805;old_locus_tag=BCEP4_1300057 NZ_CAJZAV010000036.1 Protein Homology CDS 53686 55077 . - 0 ID=cds-WP_060069716.1;Parent=gene-LDO49_RS06805;Dbxref=GenBank:WP_060069716.1;Name=WP_060069716.1;Ontology_term=GO:0003824,GO:0008410;gbkey=CDS;go_function=catalytic activity|0003824||IEA,CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755663.1;locus_tag=LDO49_RS06805;product=CoA transferase;protein_id=WP_060069716.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 55540 55863 . - . ID=gene-LDO49_RS06810;Name=LDO49_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06810;old_locus_tag=BCEP4_1300059 NZ_CAJZAV010000036.1 Protein Homology CDS 55540 55863 . - 0 ID=cds-WP_060069718.1;Parent=gene-LDO49_RS06810;Dbxref=GenBank:WP_060069718.1;Name=WP_060069718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491803.1;locus_tag=LDO49_RS06810;product=DUF2917 domain-containing protein;protein_id=WP_060069718.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 56082 57518 . + . ID=gene-LDO49_RS06815;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=LDO49_RS06815;old_locus_tag=BCEP4_1300060 NZ_CAJZAV010000036.1 Protein Homology CDS 56082 57518 . + 0 ID=cds-WP_060069721.1;Parent=gene-LDO49_RS06815;Dbxref=GenBank:WP_060069721.1;Name=WP_060069721.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329084.1;locus_tag=LDO49_RS06815;product=multidrug transporter subunit MdtD;protein_id=WP_060069721.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 57698 58972 . + . ID=gene-LDO49_RS06820;Name=LDO49_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06820;old_locus_tag=BCEP4_1300061 NZ_CAJZAV010000036.1 Protein Homology CDS 57698 58972 . + 0 ID=cds-WP_021156380.1;Parent=gene-LDO49_RS06820;Dbxref=GenBank:WP_021156380.1;Name=WP_021156380.1;Ontology_term=GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024793.1;locus_tag=LDO49_RS06820;product=EAL domain-containing protein;protein_id=WP_021156380.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 58992 59594 . - . ID=gene-LDO49_RS06825;Name=LDO49_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06825;old_locus_tag=BCEP4_1300062 NZ_CAJZAV010000036.1 Protein Homology CDS 58992 59594 . - 0 ID=cds-WP_060069723.1;Parent=gene-LDO49_RS06825;Dbxref=GenBank:WP_060069723.1;Name=WP_060069723.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723509.1;locus_tag=LDO49_RS06825;product=methyltransferase domain-containing protein;protein_id=WP_060069723.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 59695 60741 . - . ID=gene-LDO49_RS06830;Name=LDO49_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06830;old_locus_tag=BCEP4_1300063 NZ_CAJZAV010000036.1 Protein Homology CDS 59695 60741 . - 0 ID=cds-WP_060069725.1;Parent=gene-LDO49_RS06830;Dbxref=GenBank:WP_060069725.1;Name=WP_060069725.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492829.1;locus_tag=LDO49_RS06830;product=2-dehydropantoate 2-reductase;protein_id=WP_060069725.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 60734 61258 . - . ID=gene-LDO49_RS06835;Name=LDO49_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06835;old_locus_tag=BCEP4_1300064 NZ_CAJZAV010000036.1 Protein Homology CDS 60734 61258 . - 0 ID=cds-WP_048026558.1;Parent=gene-LDO49_RS06835;Dbxref=GenBank:WP_048026558.1;Name=WP_048026558.1;Ontology_term=GO:0001561,GO:0102672,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fatty acid alpha-dioxygenase activity|0102672||IEA;go_process=fatty acid alpha-oxidation|0001561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496466.1;locus_tag=LDO49_RS06835;product=Mpo1 family 2-hydroxy fatty acid dioxygenase;protein_id=WP_048026558.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 61340 62047 . + . ID=gene-LDO49_RS06840;Name=LDO49_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06840;old_locus_tag=BCEP4_1300065 NZ_CAJZAV010000036.1 Protein Homology CDS 61340 62047 . + 0 ID=cds-WP_060069727.1;Parent=gene-LDO49_RS06840;Dbxref=GenBank:WP_060069727.1;Name=WP_060069727.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416559.1;locus_tag=LDO49_RS06840;product=Crp/Fnr family transcriptional regulator;protein_id=WP_060069727.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 62135 63343 . + . ID=gene-LDO49_RS06845;Name=chrA;gbkey=Gene;gene=chrA;gene_biotype=protein_coding;locus_tag=LDO49_RS06845;old_locus_tag=BCEP4_1300066 NZ_CAJZAV010000036.1 Protein Homology CDS 62135 63343 . + 0 ID=cds-WP_059709384.1;Parent=gene-LDO49_RS06845;Dbxref=GenBank:WP_059709384.1;Name=WP_059709384.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;gene=chrA;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352985.1;locus_tag=LDO49_RS06845;product=chromate efflux transporter;protein_id=WP_059709384.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 63450 64028 . - . ID=gene-LDO49_RS06850;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=LDO49_RS06850;old_locus_tag=BCEP4_1300067 NZ_CAJZAV010000036.1 Protein Homology CDS 63450 64028 . - 0 ID=cds-WP_011352986.1;Parent=gene-LDO49_RS06850;Dbxref=GenBank:WP_011352986.1;Name=WP_011352986.1;gbkey=CDS;gene=sodB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024786.1;locus_tag=LDO49_RS06850;product=superoxide dismutase [Fe];protein_id=WP_011352986.1;transl_table=11 NZ_CAJZAV010000036.1 RefSeq gene 64243 64615 . - . ID=gene-LDO49_RS06855;Name=LDO49_RS06855;end_range=64615,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06855;old_locus_tag=BCEP4_1300068;partial=true NZ_CAJZAV010000036.1 Protein Homology CDS 64243 64615 . - 1 ID=cds-WP_290369794.1;Parent=gene-LDO49_RS06855;Dbxref=GenBank:WP_290369794.1;Name=WP_290369794.1;Ontology_term=GO:0008855;end_range=64615,.;gbkey=CDS;go_function=exodeoxyribonuclease VII activity|0008855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329091.1;locus_tag=LDO49_RS06855;partial=true;product=exodeoxyribonuclease VII large subunit;protein_id=WP_290369794.1;transl_table=11 ##sequence-region NZ_CAJZAV010000037.1 1 36819 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000037.1 RefSeq region 1 36819 . + . ID=NZ_CAJZAV010000037.1:1..36819;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_131 NZ_CAJZAV010000037.1 RefSeq gene 107 1090 . + . ID=gene-LDO49_RS06860;Name=LDO49_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06860;old_locus_tag=BCEP4_1310002 NZ_CAJZAV010000037.1 Protein Homology CDS 107 1090 . + 0 ID=cds-WP_224051565.1;Parent=gene-LDO49_RS06860;Dbxref=GenBank:WP_224051565.1;Name=WP_224051565.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660945.1;locus_tag=LDO49_RS06860;product=ABC transporter permease subunit;protein_id=WP_224051565.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq pseudogene 1087 2029 . + . ID=gene-LDO49_RS06865;Name=LDO49_RS06865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS06865;old_locus_tag=BCEP4_1310004;pseudo=true NZ_CAJZAV010000037.1 Protein Homology CDS 1087 2029 . + 0 ID=cds-LDO49_RS06865;Parent=gene-LDO49_RS06865;Note=frameshifted;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350366.1;locus_tag=LDO49_RS06865;product=ABC transporter permease subunit;pseudo=true;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 2051 3640 . + . ID=gene-LDO49_RS06870;Name=LDO49_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06870;old_locus_tag=BCEP4_1310005 NZ_CAJZAV010000037.1 Protein Homology CDS 2051 3640 . + 0 ID=cds-WP_060147772.1;Parent=gene-LDO49_RS06870;Dbxref=GenBank:WP_060147772.1;Name=WP_060147772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411185.1;locus_tag=LDO49_RS06870;product=DUF3138 family protein;protein_id=WP_060147772.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 3667 4959 . + . ID=gene-LDO49_RS06875;Name=LDO49_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06875;old_locus_tag=BCEP4_1310006 NZ_CAJZAV010000037.1 Protein Homology CDS 3667 4959 . + 0 ID=cds-WP_060147774.1;Parent=gene-LDO49_RS06875;Dbxref=GenBank:WP_060147774.1;Name=WP_060147774.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525489.1;locus_tag=LDO49_RS06875;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_060147774.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 5027 5407 . + . ID=gene-LDO49_RS06880;Name=LDO49_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06880;old_locus_tag=BCEP4_1310007 NZ_CAJZAV010000037.1 Protein Homology CDS 5027 5407 . + 0 ID=cds-WP_021160700.1;Parent=gene-LDO49_RS06880;Dbxref=GenBank:WP_021160700.1;Name=WP_021160700.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350363.1;locus_tag=LDO49_RS06880;product=cupin domain-containing protein;protein_id=WP_021160700.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 5455 6870 . + . ID=gene-LDO49_RS06885;Name=LDO49_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06885;old_locus_tag=BCEP4_1310008 NZ_CAJZAV010000037.1 Protein Homology CDS 5455 6870 . + 0 ID=cds-WP_060147802.1;Parent=gene-LDO49_RS06885;Dbxref=GenBank:WP_060147802.1;Name=WP_060147802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350362.1;locus_tag=LDO49_RS06885;product=amidase family protein;protein_id=WP_060147802.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 6896 8386 . + . ID=gene-LDO49_RS06890;Name=LDO49_RS06890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06890;old_locus_tag=BCEP4_1310009 NZ_CAJZAV010000037.1 Protein Homology CDS 6896 8386 . + 0 ID=cds-WP_060147776.1;Parent=gene-LDO49_RS06890;Dbxref=GenBank:WP_060147776.1;Name=WP_060147776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350361.1;locus_tag=LDO49_RS06890;product=aldehyde dehydrogenase;protein_id=WP_060147776.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 8438 8950 . - . ID=gene-LDO49_RS06895;Name=LDO49_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06895;old_locus_tag=BCEP4_1310010 NZ_CAJZAV010000037.1 Protein Homology CDS 8438 8950 . - 0 ID=cds-WP_060147778.1;Parent=gene-LDO49_RS06895;Dbxref=GenBank:WP_060147778.1;Name=WP_060147778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006393343.1;locus_tag=LDO49_RS06895;product=DUF4262 domain-containing protein;protein_id=WP_060147778.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 9075 10928 . - . ID=gene-LDO49_RS06900;Name=LDO49_RS06900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06900;old_locus_tag=BCEP4_1310011 NZ_CAJZAV010000037.1 Protein Homology CDS 9075 10928 . - 0 ID=cds-WP_060147779.1;Parent=gene-LDO49_RS06900;Dbxref=GenBank:WP_060147779.1;Name=WP_060147779.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490970.1;locus_tag=LDO49_RS06900;product=ABC transporter ATP-binding protein;protein_id=WP_060147779.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 11025 12044 . - . ID=gene-LDO49_RS06905;Name=LDO49_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06905;old_locus_tag=BCEP4_1310012 NZ_CAJZAV010000037.1 Protein Homology CDS 11025 12044 . - 0 ID=cds-WP_060147781.1;Parent=gene-LDO49_RS06905;Dbxref=GenBank:WP_060147781.1;Name=WP_060147781.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549314.1;locus_tag=LDO49_RS06905;product=alpha/beta hydrolase family protein;protein_id=WP_060147781.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 12193 12789 . + . ID=gene-LDO49_RS06910;Name=LDO49_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06910;old_locus_tag=BCEP4_1310013 NZ_CAJZAV010000037.1 Protein Homology CDS 12193 12789 . + 0 ID=cds-WP_042975746.1;Parent=gene-LDO49_RS06910;Dbxref=GenBank:WP_042975746.1;Name=WP_042975746.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481040.1;locus_tag=LDO49_RS06910;product=TetR/AcrR family transcriptional regulator;protein_id=WP_042975746.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 12811 13623 . - . ID=gene-LDO49_RS06915;Name=LDO49_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06915;old_locus_tag=BCEP4_1310014 NZ_CAJZAV010000037.1 Protein Homology CDS 12811 13623 . - 0 ID=cds-WP_021160693.1;Parent=gene-LDO49_RS06915;Dbxref=GenBank:WP_021160693.1;Name=WP_021160693.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882654.1;locus_tag=LDO49_RS06915;product=DNA-binding transcriptional regulator;protein_id=WP_021160693.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 13788 15635 . + . ID=gene-LDO49_RS06920;Name=LDO49_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06920;old_locus_tag=BCEP4_1310015 NZ_CAJZAV010000037.1 Protein Homology CDS 13788 15635 . + 0 ID=cds-WP_060147783.1;Parent=gene-LDO49_RS06920;Dbxref=GenBank:WP_060147783.1;Name=WP_060147783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882653.1;locus_tag=LDO49_RS06920;product=bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;protein_id=WP_060147783.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 15637 16590 . + . ID=gene-LDO49_RS06925;Name=LDO49_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06925;old_locus_tag=BCEP4_1310016 NZ_CAJZAV010000037.1 Protein Homology CDS 15637 16590 . + 0 ID=cds-WP_060147785.1;Parent=gene-LDO49_RS06925;Dbxref=GenBank:WP_060147785.1;Name=WP_060147785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725436.1;locus_tag=LDO49_RS06925;product=3-carboxyethylcatechol 2%2C3-dioxygenase;protein_id=WP_060147785.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 16595 17383 . + . ID=gene-LDO49_RS06930;Name=mhpD;gbkey=Gene;gene=mhpD;gene_biotype=protein_coding;locus_tag=LDO49_RS06930;old_locus_tag=BCEP4_1310017 NZ_CAJZAV010000037.1 Protein Homology CDS 16595 17383 . + 0 ID=cds-WP_021160689.1;Parent=gene-LDO49_RS06930;Dbxref=GenBank:WP_021160689.1;Name=WP_021160689.1;Ontology_term=GO:0009056,GO:0008684,GO:0030145;gbkey=CDS;gene=mhpD;go_function=2-oxopent-4-enoate hydratase activity|0008684||IEA,manganese ion binding|0030145||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725435.1;locus_tag=LDO49_RS06930;product=2-keto-4-pentenoate hydratase;protein_id=WP_021160689.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 17401 18348 . + . ID=gene-LDO49_RS06935;Name=LDO49_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06935;old_locus_tag=BCEP4_1310018 NZ_CAJZAV010000037.1 Protein Homology CDS 17401 18348 . + 0 ID=cds-WP_059552805.1;Parent=gene-LDO49_RS06935;Dbxref=GenBank:WP_059552805.1;Name=WP_059552805.1;Ontology_term=GO:0009056,GO:0008774;gbkey=CDS;go_function=acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882650.1;locus_tag=LDO49_RS06935;product=acetaldehyde dehydrogenase (acetylating);protein_id=WP_059552805.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 18367 19386 . + . ID=gene-LDO49_RS06940;Name=dmpG;gbkey=Gene;gene=dmpG;gene_biotype=protein_coding;locus_tag=LDO49_RS06940;old_locus_tag=BCEP4_1310019 NZ_CAJZAV010000037.1 Protein Homology CDS 18367 19386 . + 0 ID=cds-WP_060147787.1;Parent=gene-LDO49_RS06940;Dbxref=GenBank:WP_060147787.1;Name=WP_060147787.1;Ontology_term=GO:0009056,GO:0008701;gbkey=CDS;gene=dmpG;go_function=4-hydroxy-2-oxovalerate aldolase activity|0008701||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882649.1;locus_tag=LDO49_RS06940;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_060147787.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 19445 20698 . + . ID=gene-LDO49_RS06945;Name=mhpT;gbkey=Gene;gene=mhpT;gene_biotype=protein_coding;locus_tag=LDO49_RS06945;old_locus_tag=BCEP4_1310020 NZ_CAJZAV010000037.1 Protein Homology CDS 19445 20698 . + 0 ID=cds-WP_042975743.1;Parent=gene-LDO49_RS06945;Dbxref=GenBank:WP_042975743.1;Name=WP_042975743.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mhpT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882648.1;locus_tag=LDO49_RS06945;product=3-(3-hydroxy-phenyl)propionate transporter MhpT;protein_id=WP_042975743.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 20713 21579 . + . ID=gene-LDO49_RS06950;Name=LDO49_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06950;old_locus_tag=BCEP4_1310021 NZ_CAJZAV010000037.1 Protein Homology CDS 20713 21579 . + 0 ID=cds-WP_021160685.1;Parent=gene-LDO49_RS06950;Dbxref=GenBank:WP_021160685.1;Name=WP_021160685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882647.1;locus_tag=LDO49_RS06950;product=alpha/beta fold hydrolase;protein_id=WP_021160685.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 22120 22686 . + . ID=gene-LDO49_RS06955;Name=LDO49_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06955;old_locus_tag=BCEP4_1310022 NZ_CAJZAV010000037.1 Protein Homology CDS 22120 22686 . + 0 ID=cds-WP_059651950.1;Parent=gene-LDO49_RS06955;Dbxref=GenBank:WP_059651950.1;Name=WP_059651950.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490955.1;locus_tag=LDO49_RS06955;product=TetR/AcrR family transcriptional regulator;protein_id=WP_059651950.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 22911 23336 . + . ID=gene-LDO49_RS06960;Name=LDO49_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06960;old_locus_tag=BCEP4_1310023 NZ_CAJZAV010000037.1 Protein Homology CDS 22911 23336 . + 0 ID=cds-WP_021160683.1;Parent=gene-LDO49_RS06960;Dbxref=GenBank:WP_021160683.1;Name=WP_021160683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008353310.1;locus_tag=LDO49_RS06960;product=organic hydroperoxide resistance protein;protein_id=WP_021160683.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 23395 24429 . + . ID=gene-LDO49_RS06965;Name=LDO49_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06965;old_locus_tag=BCEP4_1310024 NZ_CAJZAV010000037.1 Protein Homology CDS 23395 24429 . + 0 ID=cds-WP_021160682.1;Parent=gene-LDO49_RS06965;Dbxref=GenBank:WP_021160682.1;Name=WP_021160682.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416006.1;locus_tag=LDO49_RS06965;product=alpha/beta hydrolase;protein_id=WP_021160682.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 24817 25188 . + . ID=gene-LDO49_RS06970;Name=LDO49_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06970;old_locus_tag=BCEP4_1310027 NZ_CAJZAV010000037.1 Protein Homology CDS 24817 25188 . + 0 ID=cds-WP_059492521.1;Parent=gene-LDO49_RS06970;Dbxref=GenBank:WP_059492521.1;Name=WP_059492521.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337109.1;locus_tag=LDO49_RS06970;product=CidA/LrgA family protein;protein_id=WP_059492521.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 25185 25919 . + . ID=gene-LDO49_RS06975;Name=LDO49_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06975;old_locus_tag=BCEP4_1310026 NZ_CAJZAV010000037.1 Protein Homology CDS 25185 25919 . + 0 ID=cds-WP_060147789.1;Parent=gene-LDO49_RS06975;Dbxref=GenBank:WP_060147789.1;Name=WP_060147789.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372191.1;locus_tag=LDO49_RS06975;product=LrgB family protein;protein_id=WP_060147789.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 26155 26460 . + . ID=gene-LDO49_RS06980;Name=LDO49_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06980;old_locus_tag=BCEP4_1310028 NZ_CAJZAV010000037.1 Protein Homology CDS 26155 26460 . + 0 ID=cds-WP_021160678.1;Parent=gene-LDO49_RS06980;Dbxref=GenBank:WP_021160678.1;Name=WP_021160678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490956.1;locus_tag=LDO49_RS06980;product=hypothetical protein;protein_id=WP_021160678.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 26542 27144 . - . ID=gene-LDO49_RS06985;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=LDO49_RS06985;old_locus_tag=BCEP4_1310029 NZ_CAJZAV010000037.1 Protein Homology CDS 26542 27144 . - 0 ID=cds-WP_021160677.1;Parent=gene-LDO49_RS06985;Dbxref=GenBank:WP_021160677.1;Name=WP_021160677.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350320.1;locus_tag=LDO49_RS06985;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_021160677.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 27206 27931 . - . ID=gene-LDO49_RS06990;Name=LDO49_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06990;old_locus_tag=BCEP4_1310030 NZ_CAJZAV010000037.1 Protein Homology CDS 27206 27931 . - 0 ID=cds-WP_021160676.1;Parent=gene-LDO49_RS06990;Dbxref=GenBank:WP_021160676.1;Name=WP_021160676.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525454.1;locus_tag=LDO49_RS06990;product=pirin family protein;protein_id=WP_021160676.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 28060 28977 . + . ID=gene-LDO49_RS06995;Name=LDO49_RS06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS06995;old_locus_tag=BCEP4_1310032 NZ_CAJZAV010000037.1 Protein Homology CDS 28060 28977 . + 0 ID=cds-WP_060147791.1;Parent=gene-LDO49_RS06995;Dbxref=GenBank:WP_060147791.1;Name=WP_060147791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337107.1;locus_tag=LDO49_RS06995;product=LysR family transcriptional regulator;protein_id=WP_060147791.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 29072 30193 . + . ID=gene-LDO49_RS07000;Name=LDO49_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07000;old_locus_tag=BCEP4_1310033 NZ_CAJZAV010000037.1 Protein Homology CDS 29072 30193 . + 0 ID=cds-WP_196487108.1;Parent=gene-LDO49_RS07000;Dbxref=GenBank:WP_196487108.1;Name=WP_196487108.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659875.1;locus_tag=LDO49_RS07000;product=Fic family protein;protein_id=WP_196487108.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 30441 30620 . - . ID=gene-LDO49_RS07005;Name=LDO49_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07005 NZ_CAJZAV010000037.1 GeneMarkS-2+ CDS 30441 30620 . - 0 ID=cds-WP_185633984.1;Parent=gene-LDO49_RS07005;Dbxref=GenBank:WP_185633984.1;Name=WP_185633984.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS07005;product=hypothetical protein;protein_id=WP_185633984.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 30619 31623 . + . ID=gene-LDO49_RS07010;Name=LDO49_RS07010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07010;old_locus_tag=BCEP4_1310034 NZ_CAJZAV010000037.1 Protein Homology CDS 30619 31623 . + 0 ID=cds-WP_060147796.1;Parent=gene-LDO49_RS07010;Dbxref=GenBank:WP_060147796.1;Name=WP_060147796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350311.1;locus_tag=LDO49_RS07010;product=lysozyme inhibitor LprI family protein;protein_id=WP_060147796.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 31661 32746 . - . ID=gene-LDO49_RS07015;Name=LDO49_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07015;old_locus_tag=BCEP4_1310035 NZ_CAJZAV010000037.1 Protein Homology CDS 31661 32746 . - 0 ID=cds-WP_060147798.1;Parent=gene-LDO49_RS07015;Dbxref=GenBank:WP_060147798.1;Name=WP_060147798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497907.1;locus_tag=LDO49_RS07015;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_060147798.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 32988 33914 . + . ID=gene-LDO49_RS07020;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=LDO49_RS07020;old_locus_tag=BCEP4_1310036 NZ_CAJZAV010000037.1 Protein Homology CDS 32988 33914 . + 0 ID=cds-WP_060147800.1;Parent=gene-LDO49_RS07020;Dbxref=GenBank:WP_060147800.1;Name=WP_060147800.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350309.1;locus_tag=LDO49_RS07020;product=ribokinase;protein_id=WP_060147800.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 33975 35294 . + . ID=gene-LDO49_RS07025;Name=LDO49_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07025;old_locus_tag=BCEP4_1310037 NZ_CAJZAV010000037.1 Protein Homology CDS 33975 35294 . + 0 ID=cds-WP_060147806.1;Parent=gene-LDO49_RS07025;Dbxref=GenBank:WP_060147806.1;Name=WP_060147806.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656660.1;locus_tag=LDO49_RS07025;product=MFS transporter;protein_id=WP_060147806.1;transl_table=11 NZ_CAJZAV010000037.1 RefSeq gene 35332 36279 . + . ID=gene-LDO49_RS07030;Name=LDO49_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07030;old_locus_tag=BCEP4_1310038 NZ_CAJZAV010000037.1 Protein Homology CDS 35332 36279 . + 0 ID=cds-WP_224051567.1;Parent=gene-LDO49_RS07030;Dbxref=GenBank:WP_224051567.1;Name=WP_224051567.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656661.1;locus_tag=LDO49_RS07030;product=dihydrodipicolinate synthase family protein;protein_id=WP_224051567.1;transl_table=11 ##sequence-region NZ_CAJZAV010000038.1 1 39403 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000038.1 RefSeq region 1 39403 . + . ID=NZ_CAJZAV010000038.1:1..39403;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_132 NZ_CAJZAV010000038.1 RefSeq gene 99 296 . - . ID=gene-LDO49_RS07035;Name=LDO49_RS07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07035;old_locus_tag=BCEP4_1320001 NZ_CAJZAV010000038.1 Protein Homology CDS 99 296 . - 0 ID=cds-WP_021160166.1;Parent=gene-LDO49_RS07035;Dbxref=GenBank:WP_021160166.1;Name=WP_021160166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189182.1;locus_tag=LDO49_RS07035;product=hypothetical protein;protein_id=WP_021160166.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 600 1379 . - . ID=gene-LDO49_RS07040;Name=LDO49_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07040;old_locus_tag=BCEP4_1320002 NZ_CAJZAV010000038.1 Protein Homology CDS 600 1379 . - 0 ID=cds-WP_027789189.1;Parent=gene-LDO49_RS07040;Dbxref=GenBank:WP_027789189.1;Name=WP_027789189.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364650.1;locus_tag=LDO49_RS07040;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_027789189.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 1601 3241 . + . ID=gene-LDO49_RS07045;Name=LDO49_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07045;old_locus_tag=BCEP4_1320003 NZ_CAJZAV010000038.1 Protein Homology CDS 1601 3241 . + 0 ID=cds-WP_060069803.1;Parent=gene-LDO49_RS07045;Dbxref=GenBank:WP_060069803.1;Name=WP_060069803.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212762.1;locus_tag=LDO49_RS07045;product=gamma-glutamyltransferase family protein;protein_id=WP_060069803.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 3569 4396 . + . ID=gene-LDO49_RS07050;Name=LDO49_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07050;old_locus_tag=BCEP4_1320004 NZ_CAJZAV010000038.1 Protein Homology CDS 3569 4396 . + 0 ID=cds-WP_027789191.1;Parent=gene-LDO49_RS07050;Dbxref=GenBank:WP_027789191.1;Name=WP_027789191.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896130.1;locus_tag=LDO49_RS07050;product=ferritin-like domain-containing protein;protein_id=WP_027789191.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 4467 4973 . + . ID=gene-LDO49_RS07055;Name=LDO49_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07055;old_locus_tag=BCEP4_1320006 NZ_CAJZAV010000038.1 Protein Homology CDS 4467 4973 . + 0 ID=cds-WP_060069802.1;Parent=gene-LDO49_RS07055;Dbxref=GenBank:WP_060069802.1;Name=WP_060069802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484466.1;locus_tag=LDO49_RS07055;product=hypothetical protein;protein_id=WP_060069802.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 4967 6409 . - . ID=gene-LDO49_RS07060;Name=LDO49_RS07060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07060;old_locus_tag=BCEP4_1320007 NZ_CAJZAV010000038.1 Protein Homology CDS 4967 6409 . - 0 ID=cds-WP_027789193.1;Parent=gene-LDO49_RS07060;Dbxref=GenBank:WP_027789193.1;Name=WP_027789193.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398366.1;locus_tag=LDO49_RS07060;product=DEAD/DEAH box helicase;protein_id=WP_027789193.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 6544 7842 . - . ID=gene-LDO49_RS07065;Name=LDO49_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07065;old_locus_tag=BCEP4_1320008 NZ_CAJZAV010000038.1 Protein Homology CDS 6544 7842 . - 0 ID=cds-WP_021160171.1;Parent=gene-LDO49_RS07065;Dbxref=GenBank:WP_021160171.1;Name=WP_021160171.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334110.1;locus_tag=LDO49_RS07065;product=c-type cytochrome;protein_id=WP_021160171.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 7862 8626 . - . ID=gene-LDO49_RS07070;Name=LDO49_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07070;old_locus_tag=BCEP4_1320009 NZ_CAJZAV010000038.1 Protein Homology CDS 7862 8626 . - 0 ID=cds-WP_042975501.1;Parent=gene-LDO49_RS07070;Dbxref=GenBank:WP_042975501.1;Name=WP_042975501.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546139.1;locus_tag=LDO49_RS07070;product=c-type cytochrome;protein_id=WP_042975501.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 9000 9932 . + . ID=gene-LDO49_RS07075;Name=LDO49_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07075;old_locus_tag=BCEP4_1320010 NZ_CAJZAV010000038.1 Protein Homology CDS 9000 9932 . + 0 ID=cds-WP_021160174.1;Parent=gene-LDO49_RS07075;Dbxref=GenBank:WP_021160174.1;Name=WP_021160174.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657850.1;locus_tag=LDO49_RS07075;product=CopD family protein;protein_id=WP_021160174.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 10107 11255 . - . ID=gene-LDO49_RS07080;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=LDO49_RS07080;old_locus_tag=BCEP4_1320011 NZ_CAJZAV010000038.1 Protein Homology CDS 10107 11255 . - 0 ID=cds-WP_021160175.1;Parent=gene-LDO49_RS07080;Dbxref=GenBank:WP_021160175.1;Name=WP_021160175.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018437736.1;locus_tag=LDO49_RS07080;product=galactonate dehydratase;protein_id=WP_021160175.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 11471 12103 . + . ID=gene-LDO49_RS07085;Name=LDO49_RS07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07085;old_locus_tag=BCEP4_1320012 NZ_CAJZAV010000038.1 Protein Homology CDS 11471 12103 . + 0 ID=cds-WP_308043807.1;Parent=gene-LDO49_RS07085;Dbxref=GenBank:WP_308043807.1;Name=WP_308043807.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090769.1;locus_tag=LDO49_RS07085;product=FadR/GntR family transcriptional regulator;protein_id=WP_308043807.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 12131 12376 . - . ID=gene-LDO49_RS07090;Name=LDO49_RS07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07090;old_locus_tag=BCEP4_1320013 NZ_CAJZAV010000038.1 Protein Homology CDS 12131 12376 . - 0 ID=cds-WP_021160177.1;Parent=gene-LDO49_RS07090;Dbxref=GenBank:WP_021160177.1;Name=WP_021160177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398372.1;locus_tag=LDO49_RS07090;product=DUF1272 domain-containing protein;protein_id=WP_021160177.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 12530 12877 . + . ID=gene-LDO49_RS07095;Name=LDO49_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07095;old_locus_tag=BCEP4_1320014 NZ_CAJZAV010000038.1 Protein Homology CDS 12530 12877 . + 0 ID=cds-WP_224051568.1;Parent=gene-LDO49_RS07095;Dbxref=GenBank:WP_224051568.1;Name=WP_224051568.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896139.1;locus_tag=LDO49_RS07095;product=GFA family protein;protein_id=WP_224051568.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 12912 16019 . - . ID=gene-LDO49_RS07100;Name=LDO49_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07100;old_locus_tag=BCEP4_1320015 NZ_CAJZAV010000038.1 Protein Homology CDS 12912 16019 . - 0 ID=cds-WP_224051569.1;Parent=gene-LDO49_RS07100;Dbxref=GenBank:WP_224051569.1;Name=WP_224051569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212771.1;locus_tag=LDO49_RS07100;product=transglycosylase domain-containing protein;protein_id=WP_224051569.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 16440 16832 . + . ID=gene-LDO49_RS07105;Name=LDO49_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07105;old_locus_tag=BCEP4_1320016 NZ_CAJZAV010000038.1 Protein Homology CDS 16440 16832 . + 0 ID=cds-WP_059552860.1;Parent=gene-LDO49_RS07105;Dbxref=GenBank:WP_059552860.1;Name=WP_059552860.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353096.1;locus_tag=LDO49_RS07105;product=MAPEG family protein;protein_id=WP_059552860.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 16842 17759 . - . ID=gene-LDO49_RS07110;Name=LDO49_RS07110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07110;old_locus_tag=BCEP4_1320017 NZ_CAJZAV010000038.1 Protein Homology CDS 16842 17759 . - 0 ID=cds-WP_059495403.1;Parent=gene-LDO49_RS07110;Dbxref=GenBank:WP_059495403.1;Name=WP_059495403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657844.1;locus_tag=LDO49_RS07110;product=LysR substrate-binding domain-containing protein;protein_id=WP_059495403.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 17959 19275 . + . ID=gene-LDO49_RS07115;Name=LDO49_RS07115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07115;old_locus_tag=BCEP4_1320018 NZ_CAJZAV010000038.1 Protein Homology CDS 17959 19275 . + 0 ID=cds-WP_021160182.1;Parent=gene-LDO49_RS07115;Dbxref=GenBank:WP_021160182.1;Name=WP_021160182.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657843.1;locus_tag=LDO49_RS07115;product=MFS transporter;protein_id=WP_021160182.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 19339 20811 . + . ID=gene-LDO49_RS07120;Name=LDO49_RS07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07120;old_locus_tag=BCEP4_1320019 NZ_CAJZAV010000038.1 Protein Homology CDS 19339 20811 . + 0 ID=cds-WP_081067170.1;Parent=gene-LDO49_RS07120;Dbxref=GenBank:WP_081067170.1;Name=WP_081067170.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364638.1;locus_tag=LDO49_RS07120;product=amidase;protein_id=WP_081067170.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 20928 22130 . + . ID=gene-LDO49_RS07125;Name=LDO49_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07125;old_locus_tag=BCEP4_1320020 NZ_CAJZAV010000038.1 Protein Homology CDS 20928 22130 . + 0 ID=cds-WP_224051570.1;Parent=gene-LDO49_RS07125;Dbxref=GenBank:WP_224051570.1;Name=WP_224051570.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364637.1;locus_tag=LDO49_RS07125;product=porin;protein_id=WP_224051570.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 22269 22553 . + . ID=gene-LDO49_RS07130;Name=LDO49_RS07130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07130;old_locus_tag=BCEP4_1320021 NZ_CAJZAV010000038.1 Protein Homology CDS 22269 22553 . + 0 ID=cds-WP_059495397.1;Parent=gene-LDO49_RS07130;Dbxref=GenBank:WP_059495397.1;Name=WP_059495397.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657840.1;locus_tag=LDO49_RS07130;product=PAAR domain-containing protein;protein_id=WP_059495397.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 22612 22923 . - . ID=gene-LDO49_RS07135;Name=LDO49_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07135;old_locus_tag=BCEP4_1320022 NZ_CAJZAV010000038.1 Protein Homology CDS 22612 22923 . - 0 ID=cds-WP_059523457.1;Parent=gene-LDO49_RS07135;Dbxref=GenBank:WP_059523457.1;Name=WP_059523457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546132.1;locus_tag=LDO49_RS07135;product=cupin domain-containing protein;protein_id=WP_059523457.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 22991 23674 . - . ID=gene-LDO49_RS07140;Name=LDO49_RS07140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07140;old_locus_tag=BCEP4_1320023 NZ_CAJZAV010000038.1 Protein Homology CDS 22991 23674 . - 0 ID=cds-WP_021160187.1;Parent=gene-LDO49_RS07140;Dbxref=GenBank:WP_021160187.1;Name=WP_021160187.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406515.1;locus_tag=LDO49_RS07140;product=DJ-1/PfpI family protein;protein_id=WP_021160187.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 23792 24333 . + . ID=gene-LDO49_RS37840;Name=LDO49_RS37840;end_range=24333,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37840;old_locus_tag=BCEP4_1320024;partial=true NZ_CAJZAV010000038.1 Protein Homology CDS 23792 24333 . + 0 ID=cds-WP_443797920.1;Parent=gene-LDO49_RS37840;Dbxref=GenBank:WP_443797920.1;Name=WP_443797920.1;end_range=24333,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090779.1;locus_tag=LDO49_RS37840;partial=true;product=AraC family transcriptional regulator;protein_id=WP_443797920.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 24344 24807 . + . ID=gene-LDO49_RS37845;Name=LDO49_RS37845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37845;old_locus_tag=BCEP4_1320025;partial=true;start_range=.,24344 NZ_CAJZAV010000038.1 Protein Homology CDS 24344 24807 . + 2 ID=cds-WP_443797921.1;Parent=gene-LDO49_RS37845;Dbxref=GenBank:WP_443797921.1;Name=WP_443797921.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007588224.1;locus_tag=LDO49_RS37845;partial=true;product=GlxA family transcriptional regulator;protein_id=WP_443797921.1;start_range=.,24344;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 24989 25963 . + . ID=gene-LDO49_RS07150;Name=LDO49_RS07150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07150;old_locus_tag=BCEP4_1320026 NZ_CAJZAV010000038.1 Protein Homology CDS 24989 25963 . + 0 ID=cds-WP_021160189.1;Parent=gene-LDO49_RS07150;Dbxref=GenBank:WP_021160189.1;Name=WP_021160189.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406513.1;locus_tag=LDO49_RS07150;product=LysR family transcriptional regulator;protein_id=WP_021160189.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 26049 28241 . - . ID=gene-LDO49_RS07155;Name=LDO49_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07155;old_locus_tag=BCEP4_1320027 NZ_CAJZAV010000038.1 GeneMarkS-2+ CDS 26049 28241 . - 0 ID=cds-WP_224051571.1;Parent=gene-LDO49_RS07155;Dbxref=GenBank:WP_224051571.1;Name=WP_224051571.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS07155;product=WD40 repeat domain-containing protein;protein_id=WP_224051571.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 28587 28663 . - . ID=gene-LDO49_RS07160;Name=LDO49_RS07160;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS07160;old_locus_tag=BCEP4_TRNA29 NZ_CAJZAV010000038.1 tRNAscan-SE tRNA 28587 28663 . - . ID=rna-LDO49_RS07160;Parent=gene-LDO49_RS07160;anticodon=(pos:complement(28627..28629));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS07160;product=tRNA-Met NZ_CAJZAV010000038.1 tRNAscan-SE exon 28587 28663 . - . ID=exon-LDO49_RS07160-1;Parent=rna-LDO49_RS07160;anticodon=(pos:complement(28627..28629));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS07160;product=tRNA-Met NZ_CAJZAV010000038.1 RefSeq gene 28819 30477 . - . ID=gene-LDO49_RS07165;Name=LDO49_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07165;old_locus_tag=BCEP4_1320029 NZ_CAJZAV010000038.1 Protein Homology CDS 28819 30477 . - 0 ID=cds-WP_021160191.1;Parent=gene-LDO49_RS07165;Dbxref=GenBank:WP_021160191.1;Name=WP_021160191.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546128.1;locus_tag=LDO49_RS07165;product=MFS transporter;protein_id=WP_021160191.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 30703 32250 . - . ID=gene-LDO49_RS07170;Name=LDO49_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07170;old_locus_tag=BCEP4_1320030 NZ_CAJZAV010000038.1 Protein Homology CDS 30703 32250 . - 0 ID=cds-WP_059485395.1;Parent=gene-LDO49_RS07170;Dbxref=GenBank:WP_059485395.1;Name=WP_059485395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497348.1;locus_tag=LDO49_RS07170;product=sensor histidine kinase;protein_id=WP_059485395.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 32268 32996 . - . ID=gene-LDO49_RS07175;Name=LDO49_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07175;old_locus_tag=BCEP4_1320031 NZ_CAJZAV010000038.1 Protein Homology CDS 32268 32996 . - 0 ID=cds-WP_059649778.1;Parent=gene-LDO49_RS07175;Dbxref=GenBank:WP_059649778.1;Name=WP_059649778.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334087.1;locus_tag=LDO49_RS07175;product=response regulator transcription factor;protein_id=WP_059649778.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 32995 33135 . + . ID=gene-LDO49_RS07180;Name=LDO49_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07180 NZ_CAJZAV010000038.1 GeneMarkS-2+ CDS 32995 33135 . + 0 ID=cds-WP_153488778.1;Parent=gene-LDO49_RS07180;Dbxref=GenBank:WP_153488778.1;Name=WP_153488778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS07180;product=hypothetical protein;protein_id=WP_153488778.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 33186 34256 . + . ID=gene-LDO49_RS07185;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=LDO49_RS07185;old_locus_tag=BCEP4_1320032 NZ_CAJZAV010000038.1 Protein Homology CDS 33186 34256 . + 0 ID=cds-WP_021160193.1;Parent=gene-LDO49_RS07185;Dbxref=GenBank:WP_021160193.1;Name=WP_021160193.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189458.1;locus_tag=LDO49_RS07185;product=recombinase RecA;protein_id=WP_021160193.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 34256 35125 . + . ID=gene-LDO49_RS07190;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=LDO49_RS07190;old_locus_tag=BCEP4_1320033 NZ_CAJZAV010000038.1 Protein Homology CDS 34256 35125 . + 0 ID=cds-WP_224051572.1;Parent=gene-LDO49_RS07190;Dbxref=GenBank:WP_224051572.1;Name=WP_224051572.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398387.1;locus_tag=LDO49_RS07190;product=recombination regulator RecX;protein_id=WP_224051572.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 35272 35880 . + . ID=gene-LDO49_RS07195;Name=LDO49_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07195;old_locus_tag=BCEP4_1320034 NZ_CAJZAV010000038.1 Protein Homology CDS 35272 35880 . + 0 ID=cds-WP_042975512.1;Parent=gene-LDO49_RS07195;Dbxref=GenBank:WP_042975512.1;Name=WP_042975512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657830.1;locus_tag=LDO49_RS07195;product=DUF2889 domain-containing protein;protein_id=WP_042975512.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 35949 37115 . + . ID=gene-LDO49_RS07200;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=LDO49_RS07200;old_locus_tag=BCEP4_1320035 NZ_CAJZAV010000038.1 Protein Homology CDS 35949 37115 . + 0 ID=cds-WP_006477915.1;Parent=gene-LDO49_RS07200;Dbxref=GenBank:WP_006477915.1;Name=WP_006477915.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486694.1;locus_tag=LDO49_RS07200;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_006477915.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 37184 38065 . + . ID=gene-LDO49_RS07205;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=LDO49_RS07205;old_locus_tag=BCEP4_1320036 NZ_CAJZAV010000038.1 Protein Homology CDS 37184 38065 . + 0 ID=cds-WP_006477916.1;Parent=gene-LDO49_RS07205;Dbxref=GenBank:WP_006477916.1;Name=WP_006477916.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006049960.1;locus_tag=LDO49_RS07205;product=succinate--CoA ligase subunit alpha;protein_id=WP_006477916.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 38227 38931 . + . ID=gene-LDO49_RS07210;Name=LDO49_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07210;old_locus_tag=BCEP4_1320037 NZ_CAJZAV010000038.1 Protein Homology CDS 38227 38931 . + 0 ID=cds-WP_021160196.1;Parent=gene-LDO49_RS07210;Dbxref=GenBank:WP_021160196.1;Name=WP_021160196.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497345.1;locus_tag=LDO49_RS07210;product=TerC family protein;protein_id=WP_021160196.1;transl_table=11 NZ_CAJZAV010000038.1 RefSeq gene 39029 39403 . + . ID=gene-LDO49_RS07215;Name=LDO49_RS07215;end_range=39403,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07215;partial=true NZ_CAJZAV010000038.1 Protein Homology CDS 39029 39403 . + 0 ID=cds-WP_224051573.1;Parent=gene-LDO49_RS07215;Dbxref=GenBank:WP_224051573.1;Name=WP_224051573.1;Ontology_term=GO:0007155,GO:0015628,GO:0009289,GO:0015627;end_range=39403,.;gbkey=CDS;go_component=pilus|0009289||IEA,type II protein secretion system complex|0015627||IEA;go_process=cell adhesion|0007155||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885922.1;locus_tag=LDO49_RS07215;partial=true;product=pilin;protein_id=WP_224051573.1;transl_table=11 ##sequence-region NZ_CAJZAV010000039.1 1 58673 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000039.1 RefSeq region 1 58673 . + . ID=NZ_CAJZAV010000039.1:1..58673;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_133 NZ_CAJZAV010000039.1 RefSeq gene 1 251 . + . ID=gene-LDO49_RS37850;Name=LDO49_RS37850;end_range=251,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37850;old_locus_tag=BCEP4_1330001;partial=true;start_range=.,1 NZ_CAJZAV010000039.1 Protein Homology CDS 1 251 . + 0 ID=cds-WP_443797922.1;Parent=gene-LDO49_RS37850;Dbxref=GenBank:WP_443797922.1;Name=WP_443797922.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524;end_range=251,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008342857.1;locus_tag=LDO49_RS37850;partial=true;product=class I tRNA ligase family protein;protein_id=WP_443797922.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 262 2363 . + . ID=gene-LDO49_RS07220;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=LDO49_RS07220;old_locus_tag=BCEP4_1330002;partial=true;start_range=.,262 NZ_CAJZAV010000039.1 Protein Homology CDS 262 2363 . + 2 ID=cds-WP_443797923.1;Parent=gene-LDO49_RS07220;Dbxref=GenBank:WP_443797923.1;Name=WP_443797923.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363082.1;locus_tag=LDO49_RS07220;partial=true;product=leucine--tRNA ligase;protein_id=WP_443797923.1;start_range=.,262;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 2402 2956 . + . ID=gene-LDO49_RS07225;Name=LDO49_RS07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07225;old_locus_tag=BCEP4_1330003 NZ_CAJZAV010000039.1 Protein Homology CDS 2402 2956 . + 0 ID=cds-WP_060072224.1;Parent=gene-LDO49_RS07225;Dbxref=GenBank:WP_060072224.1;Name=WP_060072224.1;Ontology_term=GO:0015920,GO:0043165,GO:0001530;gbkey=CDS;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765183.1;locus_tag=LDO49_RS07225;product=LPS-assembly lipoprotein LptE;protein_id=WP_060072224.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 2975 4069 . + . ID=gene-LDO49_RS07230;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=LDO49_RS07230;old_locus_tag=BCEP4_1330004 NZ_CAJZAV010000039.1 Protein Homology CDS 2975 4069 . + 0 ID=cds-WP_027788384.1;Parent=gene-LDO49_RS07230;Dbxref=GenBank:WP_027788384.1;Name=WP_027788384.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400342.1;locus_tag=LDO49_RS07230;product=DNA polymerase III subunit delta;protein_id=WP_027788384.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 4205 5476 . + . ID=gene-LDO49_RS07235;Name=LDO49_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07235;old_locus_tag=BCEP4_1330005 NZ_CAJZAV010000039.1 Protein Homology CDS 4205 5476 . + 0 ID=cds-WP_042974307.1;Parent=gene-LDO49_RS07235;Dbxref=GenBank:WP_042974307.1;Name=WP_042974307.1;Ontology_term=GO:0055129,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413382.1;locus_tag=LDO49_RS07235;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_042974307.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 5496 5918 . + . ID=gene-LDO49_RS07240;Name=LDO49_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07240;old_locus_tag=BCEP4_1330006 NZ_CAJZAV010000039.1 Protein Homology CDS 5496 5918 . + 0 ID=cds-WP_011350935.1;Parent=gene-LDO49_RS07240;Dbxref=GenBank:WP_011350935.1;Name=WP_011350935.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483416.1;locus_tag=LDO49_RS07240;product=CopD family protein;protein_id=WP_011350935.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 6015 6863 . - . ID=gene-LDO49_RS07245;Name=LDO49_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07245;old_locus_tag=BCEP4_1330007 NZ_CAJZAV010000039.1 Protein Homology CDS 6015 6863 . - 0 ID=cds-WP_021158790.1;Parent=gene-LDO49_RS07245;Dbxref=GenBank:WP_021158790.1;Name=WP_021158790.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476919.1;locus_tag=LDO49_RS07245;product=MurR/RpiR family transcriptional regulator;protein_id=WP_021158790.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 7158 9014 . + . ID=gene-LDO49_RS07250;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=LDO49_RS07250;old_locus_tag=BCEP4_1330008 NZ_CAJZAV010000039.1 Protein Homology CDS 7158 9014 . + 0 ID=cds-WP_060072220.1;Parent=gene-LDO49_RS07250;Dbxref=GenBank:WP_060072220.1;Name=WP_060072220.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009903961.1;locus_tag=LDO49_RS07250;product=phosphogluconate dehydratase;protein_id=WP_060072220.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 9034 9660 . + . ID=gene-LDO49_RS07255;Name=eda;gbkey=Gene;gene=eda;gene_biotype=protein_coding;locus_tag=LDO49_RS07255;old_locus_tag=BCEP4_1330009 NZ_CAJZAV010000039.1 Protein Homology CDS 9034 9660 . + 0 ID=cds-WP_060072218.1;Parent=gene-LDO49_RS07255;Dbxref=GenBank:WP_060072218.1;Name=WP_060072218.1;Ontology_term=GO:0009255,GO:0008675,GO:0008700;gbkey=CDS;gene=eda;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA,(R%2CS)-4-hydroxy-2-oxoglutarate aldolase activity|0008700||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009955692.1;locus_tag=LDO49_RS07255;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_060072218.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 9880 11241 . + . ID=gene-LDO49_RS07260;Name=LDO49_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07260;old_locus_tag=BCEP4_1330010 NZ_CAJZAV010000039.1 Protein Homology CDS 9880 11241 . + 0 ID=cds-WP_042974304.1;Parent=gene-LDO49_RS07260;Dbxref=GenBank:WP_042974304.1;Name=WP_042974304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600646.1;locus_tag=LDO49_RS07260;product=GntP family permease;protein_id=WP_042974304.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 11255 11758 . + . ID=gene-LDO49_RS07265;Name=LDO49_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07265;old_locus_tag=BCEP4_1330011 NZ_CAJZAV010000039.1 Protein Homology CDS 11255 11758 . + 0 ID=cds-WP_042974301.1;Parent=gene-LDO49_RS07265;Dbxref=GenBank:WP_042974301.1;Name=WP_042974301.1;Ontology_term=GO:0046177,GO:0005524,GO:0046316;gbkey=CDS;go_function=ATP binding|0005524||IEA,gluconokinase activity|0046316||IEA;go_process=obsolete D-gluconate catabolic process|0046177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753807.1;locus_tag=LDO49_RS07265;product=gluconokinase;protein_id=WP_042974301.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 11832 12479 . - . ID=gene-LDO49_RS07270;Name=LDO49_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07270;old_locus_tag=BCEP4_1330012 NZ_CAJZAV010000039.1 Protein Homology CDS 11832 12479 . - 0 ID=cds-WP_021158784.1;Parent=gene-LDO49_RS07270;Dbxref=GenBank:WP_021158784.1;Name=WP_021158784.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765173.1;locus_tag=LDO49_RS07270;product=TetR/AcrR family transcriptional regulator;protein_id=WP_021158784.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq pseudogene 12754 14175 . + . ID=gene-LDO49_RS07275;Name=LDO49_RS07275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS07275;old_locus_tag=BCEP4_1330014;pseudo=true NZ_CAJZAV010000039.1 Protein Homology CDS 12754 14175 . + 0 ID=cds-LDO49_RS07275;Parent=gene-LDO49_RS07275;Note=internal stop;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496716.1;locus_tag=LDO49_RS07275;product=NAD(P)/FAD-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 14251 15639 . - . ID=gene-LDO49_RS07280;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=LDO49_RS07280;old_locus_tag=BCEP4_1330015 NZ_CAJZAV010000039.1 Protein Homology CDS 14251 15639 . - 0 ID=cds-WP_027788377.1;Parent=gene-LDO49_RS07280;Dbxref=GenBank:WP_027788377.1;Name=WP_027788377.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908754.1;locus_tag=LDO49_RS07280;product=adenylosuccinate lyase;protein_id=WP_027788377.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 15870 16823 . + . ID=gene-LDO49_RS07285;Name=LDO49_RS07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07285;old_locus_tag=BCEP4_1330016 NZ_CAJZAV010000039.1 Protein Homology CDS 15870 16823 . + 0 ID=cds-WP_059484606.1;Parent=gene-LDO49_RS07285;Dbxref=GenBank:WP_059484606.1;Name=WP_059484606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413390.1;locus_tag=LDO49_RS07285;product=LysR substrate-binding domain-containing protein;protein_id=WP_059484606.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 17103 18389 . + . ID=gene-LDO49_RS07290;Name=LDO49_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07290;old_locus_tag=BCEP4_1330017 NZ_CAJZAV010000039.1 Protein Homology CDS 17103 18389 . + 0 ID=cds-WP_021163078.1;Parent=gene-LDO49_RS07290;Dbxref=GenBank:WP_021163078.1;Name=WP_021163078.1;Ontology_term=GO:0006520,GO:0000166,GO:0016639;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898081.1;locus_tag=LDO49_RS07290;product=Glu/Leu/Phe/Val family dehydrogenase;protein_id=WP_021163078.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 18608 19501 . + . ID=gene-LDO49_RS07295;Name=LDO49_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07295;old_locus_tag=BCEP4_1330018 NZ_CAJZAV010000039.1 Protein Homology CDS 18608 19501 . + 0 ID=cds-WP_224051577.1;Parent=gene-LDO49_RS07295;Dbxref=GenBank:WP_224051577.1;Name=WP_224051577.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889082.1;locus_tag=LDO49_RS07295;product=glutamate/aspartate ABC transporter substrate-binding protein;protein_id=WP_224051577.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 19586 20326 . + . ID=gene-LDO49_RS07300;Name=LDO49_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07300;old_locus_tag=BCEP4_1330019 NZ_CAJZAV010000039.1 Protein Homology CDS 19586 20326 . + 0 ID=cds-WP_027788374.1;Parent=gene-LDO49_RS07300;Dbxref=GenBank:WP_027788374.1;Name=WP_027788374.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601464.1;locus_tag=LDO49_RS07300;product=amino acid ABC transporter permease;protein_id=WP_027788374.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 20326 21003 . + . ID=gene-LDO49_RS07305;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=LDO49_RS07305;old_locus_tag=BCEP4_1330020 NZ_CAJZAV010000039.1 Protein Homology CDS 20326 21003 . + 0 ID=cds-WP_042977589.1;Parent=gene-LDO49_RS07305;Dbxref=GenBank:WP_042977589.1;Name=WP_042977589.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025271.1;locus_tag=LDO49_RS07305;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_042977589.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 21000 21127 . + . ID=gene-LDO49_RS07310;Name=LDO49_RS07310;end_range=21127,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07310;partial=true NZ_CAJZAV010000039.1 Protein Homology CDS 21000 21127 . + 0 ID=cds-WP_224051579.1;Parent=gene-LDO49_RS07310;Dbxref=GenBank:WP_224051579.1;Name=WP_224051579.1;Ontology_term=GO:0005524;end_range=21127,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005796537.1;locus_tag=LDO49_RS07310;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_224051579.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 21308 26575 . - . ID=gene-LDO49_RS07315;Name=LDO49_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07315;old_locus_tag=BCEP4_1330022 NZ_CAJZAV010000039.1 Protein Homology CDS 21308 26575 . - 0 ID=cds-WP_060073514.1;Parent=gene-LDO49_RS07315;Dbxref=GenBank:WP_060073514.1;Name=WP_060073514.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544588.1;locus_tag=LDO49_RS07315;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_060073514.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 27157 28068 . - . ID=gene-LDO49_RS07320;Name=LDO49_RS07320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07320;old_locus_tag=BCEP4_1330024 NZ_CAJZAV010000039.1 Protein Homology CDS 27157 28068 . - 0 ID=cds-WP_081052699.1;Parent=gene-LDO49_RS07320;Dbxref=GenBank:WP_081052699.1;Name=WP_081052699.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255597.1;locus_tag=LDO49_RS07320;product=class II glutamine amidotransferase;protein_id=WP_081052699.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 28274 29338 . + . ID=gene-LDO49_RS07325;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=LDO49_RS07325;old_locus_tag=BCEP4_1330026 NZ_CAJZAV010000039.1 Protein Homology CDS 28274 29338 . + 0 ID=cds-WP_027788369.1;Parent=gene-LDO49_RS07325;Dbxref=GenBank:WP_027788369.1;Name=WP_027788369.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333371.1;locus_tag=LDO49_RS07325;product=dihydroorotase;protein_id=WP_027788369.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 29335 30249 . + . ID=gene-LDO49_RS07330;Name=LDO49_RS07330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07330;old_locus_tag=BCEP4_1330025 NZ_CAJZAV010000039.1 Protein Homology CDS 29335 30249 . + 0 ID=cds-WP_124475142.1;Parent=gene-LDO49_RS07330;Dbxref=GenBank:WP_124475142.1;Name=WP_124475142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214114.1;locus_tag=LDO49_RS07330;product=DUF3025 domain-containing protein;protein_id=WP_124475142.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 30262 30673 . + . ID=gene-LDO49_RS07335;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=LDO49_RS07335;old_locus_tag=BCEP4_MISCRNA46 NZ_CAJZAV010000039.1 cmsearch RNase_P_RNA 30262 30673 . + . ID=rna-LDO49_RS07335;Parent=gene-LDO49_RS07335;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO49_RS07335;product=RNase P RNA component class A NZ_CAJZAV010000039.1 cmsearch exon 30262 30673 . + . ID=exon-LDO49_RS07335-1;Parent=rna-LDO49_RS07335;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO49_RS07335;product=RNase P RNA component class A NZ_CAJZAV010000039.1 RefSeq gene 30744 31208 . - . ID=gene-LDO49_RS07340;Name=LDO49_RS07340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07340;old_locus_tag=BCEP4_1330029 NZ_CAJZAV010000039.1 Protein Homology CDS 30744 31208 . - 0 ID=cds-WP_027788367.1;Parent=gene-LDO49_RS07340;Dbxref=GenBank:WP_027788367.1;Name=WP_027788367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194160.1;locus_tag=LDO49_RS07340;product=OsmC family protein;protein_id=WP_027788367.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 31619 31924 . - . ID=gene-LDO49_RS07345;Name=LDO49_RS07345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07345 NZ_CAJZAV010000039.1 Protein Homology CDS 31619 31924 . - 0 ID=cds-WP_059487098.1;Parent=gene-LDO49_RS07345;Dbxref=GenBank:WP_059487098.1;Name=WP_059487098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408331.1;locus_tag=LDO49_RS07345;product=DUF1090 family protein;protein_id=WP_059487098.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 32236 32664 . + . ID=gene-LDO49_RS07350;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=LDO49_RS07350;old_locus_tag=BCEP4_1330031 NZ_CAJZAV010000039.1 Protein Homology CDS 32236 32664 . + 0 ID=cds-WP_009687896.1;Parent=gene-LDO49_RS07350;Dbxref=GenBank:WP_009687896.1;Name=WP_009687896.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008919631.1;locus_tag=LDO49_RS07350;product=50S ribosomal protein L13;protein_id=WP_009687896.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 32675 33067 . + . ID=gene-LDO49_RS07355;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=LDO49_RS07355;old_locus_tag=BCEP4_1330032 NZ_CAJZAV010000039.1 Protein Homology CDS 32675 33067 . + 0 ID=cds-WP_011883283.1;Parent=gene-LDO49_RS07355;Dbxref=GenBank:WP_011883283.1;Name=WP_011883283.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019447061.1;locus_tag=LDO49_RS07355;product=30S ribosomal protein S9;protein_id=WP_011883283.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 33077 33265 . + . ID=gene-LDO49_RS07360;Name=LDO49_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07360;old_locus_tag=BCEP4_1330033 NZ_CAJZAV010000039.1 GeneMarkS-2+ CDS 33077 33265 . + 0 ID=cds-WP_185633927.1;Parent=gene-LDO49_RS07360;Dbxref=GenBank:WP_185633927.1;Name=WP_185633927.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS07360;product=hypothetical protein;protein_id=WP_185633927.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 33286 33657 . + . ID=gene-LDO49_RS07365;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=LDO49_RS07365;old_locus_tag=BCEP4_1330034 NZ_CAJZAV010000039.1 Protein Homology CDS 33286 33657 . + 0 ID=cds-WP_006751888.1;Parent=gene-LDO49_RS07365;Dbxref=GenBank:WP_006751888.1;Name=WP_006751888.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007587442.1;locus_tag=LDO49_RS07365;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_006751888.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 33764 34912 . - . ID=gene-LDO49_RS07370;Name=LDO49_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07370;old_locus_tag=BCEP4_1330035 NZ_CAJZAV010000039.1 Protein Homology CDS 33764 34912 . - 0 ID=cds-WP_060073508.1;Parent=gene-LDO49_RS07370;Dbxref=GenBank:WP_060073508.1;Name=WP_060073508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883285.1;locus_tag=LDO49_RS07370;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_060073508.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 35055 36296 . + . ID=gene-LDO49_RS07375;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=LDO49_RS07375;old_locus_tag=BCEP4_1330036 NZ_CAJZAV010000039.1 Protein Homology CDS 35055 36296 . + 0 ID=cds-WP_021163702.1;Parent=gene-LDO49_RS07375;Dbxref=GenBank:WP_021163702.1;Name=WP_021163702.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350958.1;locus_tag=LDO49_RS07375;product=tyrosine--tRNA ligase;protein_id=WP_021163702.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 36293 36751 . + . ID=gene-LDO49_RS07380;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=LDO49_RS07380;old_locus_tag=BCEP4_1330037 NZ_CAJZAV010000039.1 Protein Homology CDS 36293 36751 . + 0 ID=cds-WP_048024143.1;Parent=gene-LDO49_RS07380;Dbxref=GenBank:WP_048024143.1;Name=WP_048024143.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091359.1;locus_tag=LDO49_RS07380;product=D-aminoacyl-tRNA deacylase;protein_id=WP_048024143.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 36775 37437 . + . ID=gene-LDO49_RS07385;Name=LDO49_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07385;old_locus_tag=BCEP4_1330038 NZ_CAJZAV010000039.1 Protein Homology CDS 36775 37437 . + 0 ID=cds-WP_060054693.1;Parent=gene-LDO49_RS07385;Dbxref=GenBank:WP_060054693.1;Name=WP_060054693.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009903982.1;locus_tag=LDO49_RS07385;product=histidine phosphatase family protein;protein_id=WP_060054693.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 37498 38625 . - . ID=gene-LDO49_RS07390;Name=LDO49_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07390;old_locus_tag=BCEP4_1330039 NZ_CAJZAV010000039.1 Protein Homology CDS 37498 38625 . - 0 ID=cds-WP_060073526.1;Parent=gene-LDO49_RS07390;Dbxref=GenBank:WP_060073526.1;Name=WP_060073526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350961.1;locus_tag=LDO49_RS07390;product=ParB/Srx family N-terminal domain-containing protein;protein_id=WP_060073526.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 38778 39731 . - . ID=gene-LDO49_RS07395;Name=LDO49_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07395;old_locus_tag=BCEP4_1330040 NZ_CAJZAV010000039.1 Protein Homology CDS 38778 39731 . - 0 ID=cds-WP_059590889.1;Parent=gene-LDO49_RS07395;Dbxref=GenBank:WP_059590889.1;Name=WP_059590889.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350962.1;locus_tag=LDO49_RS07395;product=oxygenase MpaB family protein;protein_id=WP_059590889.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 39756 40826 . - . ID=gene-LDO49_RS07400;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=LDO49_RS07400;old_locus_tag=BCEP4_1330041 NZ_CAJZAV010000039.1 Protein Homology CDS 39756 40826 . - 0 ID=cds-WP_021162489.1;Parent=gene-LDO49_RS07400;Dbxref=GenBank:WP_021162489.1;Name=WP_021162489.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401680.1;locus_tag=LDO49_RS07400;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_021162489.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 40935 41516 . - . ID=gene-LDO49_RS07405;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=LDO49_RS07405;old_locus_tag=BCEP4_1330042 NZ_CAJZAV010000039.1 Protein Homology CDS 40935 41516 . - 0 ID=cds-WP_021162490.1;Parent=gene-LDO49_RS07405;Dbxref=GenBank:WP_021162490.1;Name=WP_021162490.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069298.1;locus_tag=LDO49_RS07405;product=Holliday junction branch migration protein RuvA;protein_id=WP_021162490.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 41681 42223 . - . ID=gene-LDO49_RS07410;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=LDO49_RS07410;old_locus_tag=BCEP4_1330043 NZ_CAJZAV010000039.1 Protein Homology CDS 41681 42223 . - 0 ID=cds-WP_021162491.1;Parent=gene-LDO49_RS07410;Dbxref=GenBank:WP_021162491.1;Name=WP_021162491.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401929.1;locus_tag=LDO49_RS07410;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_021162491.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 42378 43943 . - . ID=gene-LDO49_RS07415;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=LDO49_RS07415;old_locus_tag=BCEP4_1330044 NZ_CAJZAV010000039.1 Protein Homology CDS 42378 43943 . - 0 ID=cds-WP_021162493.1;Parent=gene-LDO49_RS07415;Dbxref=GenBank:WP_021162493.1;Name=WP_021162493.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069295.1;locus_tag=LDO49_RS07415;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_021162493.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 43988 44221 . - . ID=gene-LDO49_RS07420;Name=LDO49_RS07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07420;old_locus_tag=BCEP4_1330045 NZ_CAJZAV010000039.1 Protein Homology CDS 43988 44221 . - 0 ID=cds-WP_006476892.1;Parent=gene-LDO49_RS07420;Dbxref=GenBank:WP_006476892.1;Name=WP_006476892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013436270.1;locus_tag=LDO49_RS07420;product=Fis family transcriptional regulator;protein_id=WP_006476892.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 44218 45285 . - . ID=gene-LDO49_RS07425;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=LDO49_RS07425;old_locus_tag=BCEP4_1330046 NZ_CAJZAV010000039.1 Protein Homology CDS 44218 45285 . - 0 ID=cds-WP_042977079.1;Parent=gene-LDO49_RS07425;Dbxref=GenBank:WP_042977079.1;Name=WP_042977079.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401674.1;locus_tag=LDO49_RS07425;product=tRNA dihydrouridine synthase DusB;protein_id=WP_042977079.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 45410 46597 . - . ID=gene-LDO49_RS07430;Name=LDO49_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07430;old_locus_tag=BCEP4_1330047 NZ_CAJZAV010000039.1 Protein Homology CDS 45410 46597 . - 0 ID=cds-WP_060054695.1;Parent=gene-LDO49_RS07430;Dbxref=GenBank:WP_060054695.1;Name=WP_060054695.1;Ontology_term=GO:0006744,GO:0016705,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350968.1;locus_tag=LDO49_RS07430;product=UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase;protein_id=WP_060054695.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 46638 48023 . - . ID=gene-LDO49_RS07435;Name=LDO49_RS07435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07435;old_locus_tag=BCEP4_1330048 NZ_CAJZAV010000039.1 Protein Homology CDS 46638 48023 . - 0 ID=cds-WP_027788358.1;Parent=gene-LDO49_RS07435;Dbxref=GenBank:WP_027788358.1;Name=WP_027788358.1;Ontology_term=GO:0030145,GO:0070006;gbkey=CDS;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214108.1;locus_tag=LDO49_RS07435;product=aminopeptidase P N-terminal domain-containing protein;protein_id=WP_027788358.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 48211 48822 . + . ID=gene-LDO49_RS07440;Name=LDO49_RS07440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07440;old_locus_tag=BCEP4_1330050 NZ_CAJZAV010000039.1 Protein Homology CDS 48211 48822 . + 0 ID=cds-WP_021162497.1;Parent=gene-LDO49_RS07440;Dbxref=GenBank:WP_021162497.1;Name=WP_021162497.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483433.1;locus_tag=LDO49_RS07440;product=glutathione S-transferase family protein;protein_id=WP_021162497.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 48942 50561 . - . ID=gene-LDO49_RS07445;Name=LDO49_RS07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07445;old_locus_tag=BCEP4_1330051 NZ_CAJZAV010000039.1 Protein Homology CDS 48942 50561 . - 0 ID=cds-WP_021162498.1;Parent=gene-LDO49_RS07445;Dbxref=GenBank:WP_021162498.1;Name=WP_021162498.1;Ontology_term=GO:0006537,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=glutamate biosynthetic process|0006537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327911.1;locus_tag=LDO49_RS07445;product=FMN-binding glutamate synthase family protein;protein_id=WP_021162498.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 50759 51523 . - . ID=gene-LDO49_RS07450;Name=LDO49_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07450;old_locus_tag=BCEP4_1330052 NZ_CAJZAV010000039.1 Protein Homology CDS 50759 51523 . - 0 ID=cds-WP_060073506.1;Parent=gene-LDO49_RS07450;Dbxref=GenBank:WP_060073506.1;Name=WP_060073506.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484293.1;locus_tag=LDO49_RS07450;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_060073506.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 51598 51972 . + . ID=gene-LDO49_RS07455;Name=LDO49_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07455;old_locus_tag=BCEP4_1330053 NZ_CAJZAV010000039.1 Protein Homology CDS 51598 51972 . + 0 ID=cds-WP_027788355.1;Parent=gene-LDO49_RS07455;Dbxref=GenBank:WP_027788355.1;Name=WP_027788355.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009770764.1;locus_tag=LDO49_RS07455;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_027788355.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 52038 53186 . - . ID=gene-LDO49_RS07460;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=LDO49_RS07460;old_locus_tag=BCEP4_1330054 NZ_CAJZAV010000039.1 Protein Homology CDS 52038 53186 . - 0 ID=cds-WP_059487115.1;Parent=gene-LDO49_RS07460;Dbxref=GenBank:WP_059487115.1;Name=WP_059487115.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492953.1;locus_tag=LDO49_RS07460;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_059487115.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 53183 53692 . - . ID=gene-LDO49_RS07465;Name=LDO49_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07465;old_locus_tag=BCEP4_1330055 NZ_CAJZAV010000039.1 Protein Homology CDS 53183 53692 . - 0 ID=cds-WP_021164203.1;Parent=gene-LDO49_RS07465;Dbxref=GenBank:WP_021164203.1;Name=WP_021164203.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194031.1;locus_tag=LDO49_RS07465;product=NUDIX hydrolase;protein_id=WP_021164203.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 53771 53908 . + . ID=gene-LDO49_RS07470;Name=LDO49_RS07470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07470;old_locus_tag=BCEP4_1330056 NZ_CAJZAV010000039.1 GeneMarkS-2+ CDS 53771 53908 . + 0 ID=cds-WP_155634218.1;Parent=gene-LDO49_RS07470;Dbxref=GenBank:WP_155634218.1;Name=WP_155634218.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS07470;product=hypothetical protein;protein_id=WP_155634218.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 53997 54917 . - . ID=gene-LDO49_RS07475;Name=LDO49_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07475;old_locus_tag=BCEP4_1330057 NZ_CAJZAV010000039.1 Protein Homology CDS 53997 54917 . - 0 ID=cds-WP_059497184.1;Parent=gene-LDO49_RS07475;Dbxref=GenBank:WP_059497184.1;Name=WP_059497184.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898055.1;locus_tag=LDO49_RS07475;product=LysR family transcriptional regulator;protein_id=WP_059497184.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 54998 55921 . + . ID=gene-LDO49_RS07480;Name=LDO49_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07480;old_locus_tag=BCEP4_1330058 NZ_CAJZAV010000039.1 Protein Homology CDS 54998 55921 . + 0 ID=cds-WP_021164200.1;Parent=gene-LDO49_RS07480;Dbxref=GenBank:WP_021164200.1;Name=WP_021164200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898054.1;locus_tag=LDO49_RS07480;product=carbon-nitrogen hydrolase family protein;protein_id=WP_021164200.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 56002 56688 . - . ID=gene-LDO49_RS07485;Name=LDO49_RS07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07485;old_locus_tag=BCEP4_1330059 NZ_CAJZAV010000039.1 Protein Homology CDS 56002 56688 . - 0 ID=cds-WP_059487119.1;Parent=gene-LDO49_RS07485;Dbxref=GenBank:WP_059487119.1;Name=WP_059487119.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898053.1;locus_tag=LDO49_RS07485;product=helix-turn-helix transcriptional regulator;protein_id=WP_059487119.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 56762 57172 . - . ID=gene-LDO49_RS07490;Name=LDO49_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07490;old_locus_tag=BCEP4_1330060 NZ_CAJZAV010000039.1 Protein Homology CDS 56762 57172 . - 0 ID=cds-WP_059857684.1;Parent=gene-LDO49_RS07490;Dbxref=GenBank:WP_059857684.1;Name=WP_059857684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751908.1;locus_tag=LDO49_RS07490;product=VOC family protein;protein_id=WP_059857684.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq gene 57646 58444 . - . ID=gene-LDO49_RS07495;Name=LDO49_RS07495;end_range=58444,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07495;old_locus_tag=BCEP4_1330064;partial=true NZ_CAJZAV010000039.1 Protein Homology CDS 57646 58444 . - 1 ID=cds-WP_443797924.1;Parent=gene-LDO49_RS07495;Dbxref=GenBank:WP_443797924.1;Name=WP_443797924.1;Ontology_term=GO:0001510,GO:0008757,GO:1904047;end_range=58444,.;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333399.1;locus_tag=LDO49_RS07495;partial=true;product=THUMP domain-containing class I SAM-dependent RNA methyltransferase;protein_id=WP_443797924.1;transl_table=11 NZ_CAJZAV010000039.1 RefSeq pseudogene 58455 58673 . - . ID=gene-LDO49_RS37855;Name=LDO49_RS37855;end_range=58673,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37855;partial=true;pseudo=true;start_range=.,58455 NZ_CAJZAV010000039.1 Protein Homology CDS 58455 58673 . - 2 ID=cds-LDO49_RS37855;Parent=gene-LDO49_RS37855;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=58673,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522109.1;locus_tag=LDO49_RS37855;partial=true;product=class I SAM-dependent RNA methyltransferase;pseudo=true;start_range=.,58455;transl_table=11 ##sequence-region NZ_CAJZAV010000040.1 1 15389 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000040.1 RefSeq region 1 15389 . + . ID=NZ_CAJZAV010000040.1:1..15389;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_134 NZ_CAJZAV010000040.1 RefSeq gene 1 756 . - . ID=gene-LDO49_RS07500;Name=LDO49_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07500;partial=true;start_range=.,1 NZ_CAJZAV010000040.1 Protein Homology CDS 1 756 . - 0 ID=cds-WP_224051580.1;Parent=gene-LDO49_RS07500;Dbxref=GenBank:WP_224051580.1;Name=WP_224051580.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405009.1;locus_tag=LDO49_RS07500;partial=true;product=cation:proton antiporter;protein_id=WP_224051580.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000040.1 RefSeq gene 767 1027 . - . ID=gene-LDO49_RS07505;Name=LDO49_RS07505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07505;old_locus_tag=BCEP4_1340002 NZ_CAJZAV010000040.1 Protein Homology CDS 767 1027 . - 0 ID=cds-WP_021160829.1;Parent=gene-LDO49_RS07505;Dbxref=GenBank:WP_021160829.1;Name=WP_021160829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482681.1;locus_tag=LDO49_RS07505;product=DUF1427 family protein;protein_id=WP_021160829.1;transl_table=11 NZ_CAJZAV010000040.1 RefSeq gene 1026 1301 . + . ID=gene-LDO49_RS07510;Name=LDO49_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07510 NZ_CAJZAV010000040.1 GeneMarkS-2+ CDS 1026 1301 . + 0 ID=cds-WP_224051581.1;Parent=gene-LDO49_RS07510;Dbxref=GenBank:WP_224051581.1;Name=WP_224051581.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS07510;product=hypothetical protein;protein_id=WP_224051581.1;transl_table=11 NZ_CAJZAV010000040.1 RefSeq gene 1310 1996 . + . ID=gene-LDO49_RS07515;Name=LDO49_RS07515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07515;old_locus_tag=BCEP4_1340003 NZ_CAJZAV010000040.1 Protein Homology CDS 1310 1996 . + 0 ID=cds-WP_224051582.1;Parent=gene-LDO49_RS07515;Dbxref=GenBank:WP_224051582.1;Name=WP_224051582.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337464.1;locus_tag=LDO49_RS07515;product=hydrolase;protein_id=WP_224051582.1;transl_table=11 NZ_CAJZAV010000040.1 RefSeq gene 2019 2942 . - . ID=gene-LDO49_RS07520;Name=LDO49_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07520;old_locus_tag=BCEP4_1340004 NZ_CAJZAV010000040.1 Protein Homology CDS 2019 2942 . - 0 ID=cds-WP_060074697.1;Parent=gene-LDO49_RS07520;Dbxref=GenBank:WP_060074697.1;Name=WP_060074697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482668.1;locus_tag=LDO49_RS07520;product=LysR family transcriptional regulator;protein_id=WP_060074697.1;transl_table=11 NZ_CAJZAV010000040.1 RefSeq gene 3061 3228 . + . ID=gene-LDO49_RS07525;Name=LDO49_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07525;old_locus_tag=BCEP4_1340005 NZ_CAJZAV010000040.1 Protein Homology CDS 3061 3228 . + 0 ID=cds-WP_021160826.1;Parent=gene-LDO49_RS07525;Dbxref=GenBank:WP_021160826.1;Name=WP_021160826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897309.1;locus_tag=LDO49_RS07525;product=DUF1427 family protein;protein_id=WP_021160826.1;transl_table=11 NZ_CAJZAV010000040.1 RefSeq pseudogene 3248 3448 . + . ID=gene-LDO49_RS07530;Name=LDO49_RS07530;end_range=3448,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS07530;partial=true;pseudo=true NZ_CAJZAV010000040.1 Protein Homology CDS 3248 3448 . + 0 ID=cds-LDO49_RS07530;Parent=gene-LDO49_RS07530;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=3448,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337466.1;locus_tag=LDO49_RS07530;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAV010000040.1 RefSeq gene 3474 3650 . + . ID=gene-LDO49_RS07535;Name=LDO49_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07535;old_locus_tag=BCEP4_1340007 NZ_CAJZAV010000040.1 GeneMarkS-2+ CDS 3474 3650 . + 0 ID=cds-WP_372585831.1;Parent=gene-LDO49_RS07535;Dbxref=GenBank:WP_372585831.1;Name=WP_372585831.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS07535;product=hypothetical protein;protein_id=WP_372585831.1;transl_table=11 NZ_CAJZAV010000040.1 RefSeq gene 3676 4590 . + . ID=gene-LDO49_RS07540;Name=LDO49_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07540;old_locus_tag=BCEP4_1340008 NZ_CAJZAV010000040.1 Protein Homology CDS 3676 4590 . + 0 ID=cds-WP_060051735.1;Parent=gene-LDO49_RS07540;Dbxref=GenBank:WP_060051735.1;Name=WP_060051735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756028.1;locus_tag=LDO49_RS07540;product=hypothetical protein;protein_id=WP_060051735.1;transl_table=11 NZ_CAJZAV010000040.1 RefSeq gene 4587 5282 . + . ID=gene-LDO49_RS07545;Name=LDO49_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07545;old_locus_tag=BCEP4_1340009 NZ_CAJZAV010000040.1 Protein Homology CDS 4587 5282 . + 0 ID=cds-WP_059486860.1;Parent=gene-LDO49_RS07545;Dbxref=GenBank:WP_059486860.1;Name=WP_059486860.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897305.1;locus_tag=LDO49_RS07545;product=YoaK family protein;protein_id=WP_059486860.1;transl_table=11 NZ_CAJZAV010000040.1 RefSeq gene 5527 7113 . - . ID=gene-LDO49_RS07550;Name=LDO49_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07550;old_locus_tag=BCEP4_1340010 NZ_CAJZAV010000040.1 Protein Homology CDS 5527 7113 . - 0 ID=cds-WP_060074696.1;Parent=gene-LDO49_RS07550;Dbxref=GenBank:WP_060074696.1;Name=WP_060074696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656600.1;locus_tag=LDO49_RS07550;product=acid phosphatase;protein_id=WP_060074696.1;transl_table=11 NZ_CAJZAV010000040.1 RefSeq gene 7338 8723 . + . ID=gene-LDO49_RS07555;Name=LDO49_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07555;old_locus_tag=BCEP4_1340011 NZ_CAJZAV010000040.1 Protein Homology CDS 7338 8723 . + 0 ID=cds-WP_060156194.1;Parent=gene-LDO49_RS07555;Dbxref=GenBank:WP_060156194.1;Name=WP_060156194.1;Ontology_term=GO:0004130,GO:0016491,GO:0020037;gbkey=CDS;go_function=cytochrome-c peroxidase activity|0004130||IEA,oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351712.1;locus_tag=LDO49_RS07555;product=cytochrome-c peroxidase;protein_id=WP_060156194.1;transl_table=11 NZ_CAJZAV010000040.1 RefSeq gene 8852 9238 . + . ID=gene-LDO49_RS07560;Name=LDO49_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07560;old_locus_tag=BCEP4_1340012 NZ_CAJZAV010000040.1 Protein Homology CDS 8852 9238 . + 0 ID=cds-WP_021160818.1;Parent=gene-LDO49_RS07560;Dbxref=GenBank:WP_021160818.1;Name=WP_021160818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004545113.1;locus_tag=LDO49_RS07560;product=hypothetical protein;protein_id=WP_021160818.1;transl_table=11 NZ_CAJZAV010000040.1 RefSeq gene 9250 9720 . + . ID=gene-LDO49_RS07565;Name=LDO49_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07565;old_locus_tag=BCEP4_1340013 NZ_CAJZAV010000040.1 Protein Homology CDS 9250 9720 . + 0 ID=cds-WP_027787759.1;Parent=gene-LDO49_RS07565;Dbxref=GenBank:WP_027787759.1;Name=WP_027787759.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328330.1;locus_tag=LDO49_RS07565;product=NUDIX domain-containing protein;protein_id=WP_027787759.1;transl_table=11 NZ_CAJZAV010000040.1 RefSeq gene 10189 12294 . + . ID=gene-LDO49_RS07570;Name=LDO49_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07570;old_locus_tag=BCEP4_1340015 NZ_CAJZAV010000040.1 Protein Homology CDS 10189 12294 . + 0 ID=cds-WP_224051583.1;Parent=gene-LDO49_RS07570;Dbxref=GenBank:WP_224051583.1;Name=WP_224051583.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020202195.1;locus_tag=LDO49_RS07570;product=type VI secretion system Vgr family protein;protein_id=WP_224051583.1;transl_table=11 NZ_CAJZAV010000040.1 RefSeq gene 12291 13166 . + . ID=gene-LDO49_RS07575;Name=LDO49_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07575;old_locus_tag=BCEP4_1340016 NZ_CAJZAV010000040.1 Protein Homology CDS 12291 13166 . + 0 ID=cds-WP_060074693.1;Parent=gene-LDO49_RS07575;Dbxref=GenBank:WP_060074693.1;Name=WP_060074693.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024894.6;locus_tag=LDO49_RS07575;product=DUF4123 domain-containing protein;protein_id=WP_060074693.1;transl_table=11 NZ_CAJZAV010000040.1 RefSeq gene 13188 15389 . + . ID=gene-LDO49_RS07580;Name=LDO49_RS07580;end_range=15389,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07580;partial=true NZ_CAJZAV010000040.1 Protein Homology CDS 13188 15389 . + 0 ID=cds-WP_224051584.1;Parent=gene-LDO49_RS07580;Dbxref=GenBank:WP_224051584.1;Name=WP_224051584.1;end_range=15389,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF041559.1;locus_tag=LDO49_RS07580;partial=true;product=T6SS effector BTH_I2691 family protein;protein_id=WP_224051584.1;transl_table=11 ##sequence-region NZ_CAJZAV010000041.1 1 63354 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000041.1 RefSeq region 1 63354 . + . ID=NZ_CAJZAV010000041.1:1..63354;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_135 NZ_CAJZAV010000041.1 RefSeq pseudogene 1 116 . - . ID=gene-LDO49_RS07585;Name=LDO49_RS07585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS07585;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000041.1 Protein Homology CDS 1 116 . - 0 ID=cds-LDO49_RS07585;Parent=gene-LDO49_RS07585;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661019.1;locus_tag=LDO49_RS07585;partial=true;product=acyl carrier protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 175 1278 . - . ID=gene-LDO49_RS07590;Name=LDO49_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07590;old_locus_tag=BCEP4_1350002 NZ_CAJZAV010000041.1 Protein Homology CDS 175 1278 . - 0 ID=cds-WP_059483996.1;Parent=gene-LDO49_RS07590;Dbxref=GenBank:WP_059483996.1;Name=WP_059483996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337006.1;locus_tag=LDO49_RS07590;product=hypothetical protein;protein_id=WP_059483996.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 1294 2613 . - . ID=gene-LDO49_RS07595;Name=LDO49_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07595;old_locus_tag=BCEP4_1350003 NZ_CAJZAV010000041.1 Protein Homology CDS 1294 2613 . - 0 ID=cds-WP_059652202.1;Parent=gene-LDO49_RS07595;Dbxref=GenBank:WP_059652202.1;Name=WP_059652202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498013.1;locus_tag=LDO49_RS07595;product=hypothetical protein;protein_id=WP_059652202.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 2603 3352 . - . ID=gene-LDO49_RS07600;Name=LDO49_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07600;old_locus_tag=BCEP4_1350004 NZ_CAJZAV010000041.1 Protein Homology CDS 2603 3352 . - 0 ID=cds-WP_060147622.1;Parent=gene-LDO49_RS07600;Dbxref=GenBank:WP_060147622.1;Name=WP_060147622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549190.1;locus_tag=LDO49_RS07600;product=outer membrane lipoprotein-sorting protein;protein_id=WP_060147622.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 3349 4566 . - . ID=gene-LDO49_RS07605;Name=LDO49_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07605;old_locus_tag=BCEP4_1350005 NZ_CAJZAV010000041.1 Protein Homology CDS 3349 4566 . - 0 ID=cds-WP_060147621.1;Parent=gene-LDO49_RS07605;Dbxref=GenBank:WP_060147621.1;Name=WP_060147621.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661023.1;locus_tag=LDO49_RS07605;product=ABC transporter permease;protein_id=WP_060147621.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 4538 5248 . - . ID=gene-LDO49_RS07610;Name=LDO49_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07610;old_locus_tag=BCEP4_1350006 NZ_CAJZAV010000041.1 Protein Homology CDS 4538 5248 . - 0 ID=cds-WP_059495768.1;Parent=gene-LDO49_RS07610;Dbxref=GenBank:WP_059495768.1;Name=WP_059495768.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337003.1;locus_tag=LDO49_RS07610;product=ABC transporter ATP-binding protein;protein_id=WP_059495768.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 5245 7008 . - . ID=gene-LDO49_RS07615;Name=LDO49_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07615;old_locus_tag=BCEP4_1350007 NZ_CAJZAV010000041.1 Protein Homology CDS 5245 7008 . - 0 ID=cds-WP_124475984.1;Parent=gene-LDO49_RS07615;Dbxref=GenBank:WP_124475984.1;Name=WP_124475984.1;Ontology_term=GO:0006631,GO:0016874;gbkey=CDS;go_function=ligase activity|0016874||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498017.1;locus_tag=LDO49_RS07615;product=fatty acyl-AMP ligase;protein_id=WP_124475984.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 7427 8374 . + . ID=gene-LDO49_RS07620;Name=LDO49_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07620;old_locus_tag=BCEP4_1350008 NZ_CAJZAV010000041.1 Protein Homology CDS 7427 8374 . + 0 ID=cds-WP_060147619.1;Parent=gene-LDO49_RS07620;Dbxref=GenBank:WP_060147619.1;Name=WP_060147619.1;Ontology_term=GO:0006633,GO:0016717,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on paired donors%2C with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water|0016717||IEA,metal ion binding|0046872||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694954.1;locus_tag=LDO49_RS07620;product=fatty acid desaturase family protein;protein_id=WP_060147619.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 8431 9303 . + . ID=gene-LDO49_RS07625;Name=LDO49_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07625;old_locus_tag=BCEP4_1350009 NZ_CAJZAV010000041.1 Protein Homology CDS 8431 9303 . + 0 ID=cds-WP_060147639.1;Parent=gene-LDO49_RS07625;Dbxref=GenBank:WP_060147639.1;Name=WP_060147639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350096.1;locus_tag=LDO49_RS07625;product=hypothetical protein;protein_id=WP_060147639.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 9919 10911 . + . ID=gene-LDO49_RS07630;Name=LDO49_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07630;old_locus_tag=BCEP4_1350011 NZ_CAJZAV010000041.1 Protein Homology CDS 9919 10911 . + 0 ID=cds-WP_048027489.1;Parent=gene-LDO49_RS07630;Dbxref=GenBank:WP_048027489.1;Name=WP_048027489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481185.1;locus_tag=LDO49_RS07630;product=LysR substrate-binding domain-containing protein;protein_id=WP_048027489.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 10933 11085 . + . ID=gene-LDO49_RS07635;Name=LDO49_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07635 NZ_CAJZAV010000041.1 GeneMarkS-2+ CDS 10933 11085 . + 0 ID=cds-WP_155638151.1;Parent=gene-LDO49_RS07635;Dbxref=GenBank:WP_155638151.1;Name=WP_155638151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS07635;product=hypothetical protein;protein_id=WP_155638151.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 11262 11567 . - . ID=gene-LDO49_RS07640;Name=LDO49_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07640;old_locus_tag=BCEP4_1350012 NZ_CAJZAV010000041.1 Protein Homology CDS 11262 11567 . - 0 ID=cds-WP_059587291.1;Parent=gene-LDO49_RS07640;Dbxref=GenBank:WP_059587291.1;Name=WP_059587291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478802.1;locus_tag=LDO49_RS07640;product=DUF4148 domain-containing protein;protein_id=WP_059587291.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 11846 12055 . + . ID=gene-LDO49_RS07645;Name=LDO49_RS07645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07645;old_locus_tag=BCEP4_1350013 NZ_CAJZAV010000041.1 Protein Homology CDS 11846 12055 . + 0 ID=cds-WP_059485488.1;Parent=gene-LDO49_RS07645;Dbxref=GenBank:WP_059485488.1;Name=WP_059485488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547495.1;locus_tag=LDO49_RS07645;product=hypothetical protein;protein_id=WP_059485488.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 12377 13054 . + . ID=gene-LDO49_RS07650;Name=LDO49_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07650;old_locus_tag=BCEP4_1350015 NZ_CAJZAV010000041.1 Protein Homology CDS 12377 13054 . + 0 ID=cds-WP_021160456.1;Parent=gene-LDO49_RS07650;Dbxref=GenBank:WP_021160456.1;Name=WP_021160456.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018423319.1;locus_tag=LDO49_RS07650;product=response regulator transcription factor;protein_id=WP_021160456.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 13134 14465 . + . ID=gene-LDO49_RS07655;Name=LDO49_RS07655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07655;old_locus_tag=BCEP4_1350016 NZ_CAJZAV010000041.1 Protein Homology CDS 13134 14465 . + 0 ID=cds-WP_042975654.1;Parent=gene-LDO49_RS07655;Dbxref=GenBank:WP_042975654.1;Name=WP_042975654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339831.1;locus_tag=LDO49_RS07655;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_042975654.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 14524 15207 . + . ID=gene-LDO49_RS07660;Name=LDO49_RS07660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07660;old_locus_tag=BCEP4_1350017 NZ_CAJZAV010000041.1 Protein Homology CDS 14524 15207 . + 0 ID=cds-WP_059485489.1;Parent=gene-LDO49_RS07660;Dbxref=GenBank:WP_059485489.1;Name=WP_059485489.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339832.1;locus_tag=LDO49_RS07660;product=response regulator transcription factor;protein_id=WP_059485489.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 15267 15422 . - . ID=gene-LDO49_RS07665;Name=LDO49_RS07665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07665;old_locus_tag=BCEP4_1350018 NZ_CAJZAV010000041.1 Protein Homology CDS 15267 15422 . - 0 ID=cds-WP_162923038.1;Parent=gene-LDO49_RS07665;Dbxref=GenBank:WP_162923038.1;Name=WP_162923038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699628.1;locus_tag=LDO49_RS07665;product=hypothetical protein;protein_id=WP_162923038.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 15492 15764 . - . ID=gene-LDO49_RS07670;Name=LDO49_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07670;old_locus_tag=BCEP4_1350019 NZ_CAJZAV010000041.1 Protein Homology CDS 15492 15764 . - 0 ID=cds-WP_042975656.1;Parent=gene-LDO49_RS07670;Dbxref=GenBank:WP_042975656.1;Name=WP_042975656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547500.1;locus_tag=LDO49_RS07670;product=DUF4148 domain-containing protein;protein_id=WP_042975656.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 16087 17262 . + . ID=gene-LDO49_RS07675;Name=LDO49_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07675;old_locus_tag=BCEP4_1350021 NZ_CAJZAV010000041.1 Protein Homology CDS 16087 17262 . + 0 ID=cds-WP_060147618.1;Parent=gene-LDO49_RS07675;Dbxref=GenBank:WP_060147618.1;Name=WP_060147618.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339835.1;locus_tag=LDO49_RS07675;product=porin;protein_id=WP_060147618.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 17347 18813 . - . ID=gene-LDO49_RS07680;Name=LDO49_RS07680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07680;old_locus_tag=BCEP4_1350022 NZ_CAJZAV010000041.1 Protein Homology CDS 17347 18813 . - 0 ID=cds-WP_060147617.1;Parent=gene-LDO49_RS07680;Dbxref=GenBank:WP_060147617.1;Name=WP_060147617.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547502.1;locus_tag=LDO49_RS07680;product=efflux transporter outer membrane subunit;protein_id=WP_060147617.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 18806 20011 . - . ID=gene-LDO49_RS07685;Name=LDO49_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07685;old_locus_tag=BCEP4_1350023 NZ_CAJZAV010000041.1 Protein Homology CDS 18806 20011 . - 0 ID=cds-WP_060147616.1;Parent=gene-LDO49_RS07685;Dbxref=GenBank:WP_060147616.1;Name=WP_060147616.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478808.1;locus_tag=LDO49_RS07685;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_060147616.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 20001 23255 . - . ID=gene-LDO49_RS07690;Name=LDO49_RS07690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07690;old_locus_tag=BCEP4_1350024 NZ_CAJZAV010000041.1 Protein Homology CDS 20001 23255 . - 0 ID=cds-WP_060147615.1;Parent=gene-LDO49_RS07690;Dbxref=GenBank:WP_060147615.1;Name=WP_060147615.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699621.1;locus_tag=LDO49_RS07690;product=efflux RND transporter permease subunit;protein_id=WP_060147615.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 23413 24087 . - . ID=gene-LDO49_RS07695;Name=LDO49_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07695;old_locus_tag=BCEP4_1350025 NZ_CAJZAV010000041.1 Protein Homology CDS 23413 24087 . - 0 ID=cds-WP_021160466.1;Parent=gene-LDO49_RS07695;Dbxref=GenBank:WP_021160466.1;Name=WP_021160466.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478810.1;locus_tag=LDO49_RS07695;product=response regulator transcription factor;protein_id=WP_021160466.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 24110 25018 . - . ID=gene-LDO49_RS07700;Name=LDO49_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07700;old_locus_tag=BCEP4_1350026 NZ_CAJZAV010000041.1 Protein Homology CDS 24110 25018 . - 0 ID=cds-WP_042975648.1;Parent=gene-LDO49_RS07700;Dbxref=GenBank:WP_042975648.1;Name=WP_042975648.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009902369.1;locus_tag=LDO49_RS07700;product=LysR family transcriptional regulator;protein_id=WP_042975648.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 25441 25815 . + . ID=gene-LDO49_RS07705;Name=LDO49_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07705;old_locus_tag=BCEP4_1350027 NZ_CAJZAV010000041.1 Protein Homology CDS 25441 25815 . + 0 ID=cds-WP_021160469.1;Parent=gene-LDO49_RS07705;Dbxref=GenBank:WP_021160469.1;Name=WP_021160469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547507.1;locus_tag=LDO49_RS07705;product=hypothetical protein;protein_id=WP_021160469.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 25891 26979 . - . ID=gene-LDO49_RS07710;Name=LDO49_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07710;old_locus_tag=BCEP4_1350029 NZ_CAJZAV010000041.1 Protein Homology CDS 25891 26979 . - 0 ID=cds-WP_059493000.1;Parent=gene-LDO49_RS07710;Dbxref=GenBank:WP_059493000.1;Name=WP_059493000.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009902355.1;locus_tag=LDO49_RS07710;product=porin;protein_id=WP_059493000.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 27323 27547 . - . ID=gene-LDO49_RS07715;Name=LDO49_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07715 NZ_CAJZAV010000041.1 GeneMarkS-2+ CDS 27323 27547 . - 0 ID=cds-WP_124843937.1;Parent=gene-LDO49_RS07715;Dbxref=GenBank:WP_124843937.1;Name=WP_124843937.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS07715;product=hypothetical protein;protein_id=WP_124843937.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 27906 28580 . + . ID=gene-LDO49_RS07720;Name=LDO49_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07720;old_locus_tag=BCEP4_1350031 NZ_CAJZAV010000041.1 Protein Homology CDS 27906 28580 . + 0 ID=cds-WP_059621419.1;Parent=gene-LDO49_RS07720;Dbxref=GenBank:WP_059621419.1;Name=WP_059621419.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329537.1;locus_tag=LDO49_RS07720;product=lytic polysaccharide monooxygenase auxiliary activity family 9 protein;protein_id=WP_059621419.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 28679 28852 . - . ID=gene-LDO49_RS07725;Name=LDO49_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07725 NZ_CAJZAV010000041.1 GeneMarkS-2+ CDS 28679 28852 . - 0 ID=cds-WP_155638150.1;Parent=gene-LDO49_RS07725;Dbxref=GenBank:WP_155638150.1;Name=WP_155638150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS07725;product=hypothetical protein;protein_id=WP_155638150.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 29486 30559 . + . ID=gene-LDO49_RS07730;Name=LDO49_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07730;old_locus_tag=BCEP4_1350033 NZ_CAJZAV010000041.1 Protein Homology CDS 29486 30559 . + 0 ID=cds-WP_060147614.1;Parent=gene-LDO49_RS07730;Dbxref=GenBank:WP_060147614.1;Name=WP_060147614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349421.1;locus_tag=LDO49_RS07730;product=hypothetical protein;protein_id=WP_060147614.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 30614 31492 . - . ID=gene-LDO49_RS07735;Name=LDO49_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07735;old_locus_tag=BCEP4_1350034 NZ_CAJZAV010000041.1 Protein Homology CDS 30614 31492 . - 0 ID=cds-WP_060147613.1;Parent=gene-LDO49_RS07735;Dbxref=GenBank:WP_060147613.1;Name=WP_060147613.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015002034.1;locus_tag=LDO49_RS07735;product=SDR family oxidoreductase;protein_id=WP_060147613.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 31678 32640 . + . ID=gene-LDO49_RS07740;Name=LDO49_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07740;old_locus_tag=BCEP4_1350035 NZ_CAJZAV010000041.1 Protein Homology CDS 31678 32640 . + 0 ID=cds-WP_021160476.1;Parent=gene-LDO49_RS07740;Dbxref=GenBank:WP_021160476.1;Name=WP_021160476.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549100.1;locus_tag=LDO49_RS07740;product=GlxA family transcriptional regulator;protein_id=WP_021160476.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 32718 33650 . - . ID=gene-LDO49_RS07745;Name=LDO49_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07745;old_locus_tag=BCEP4_1350036 NZ_CAJZAV010000041.1 Protein Homology CDS 32718 33650 . - 0 ID=cds-WP_042975650.1;Parent=gene-LDO49_RS07745;Dbxref=GenBank:WP_042975650.1;Name=WP_042975650.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336929.1;locus_tag=LDO49_RS07745;product=LysR family transcriptional regulator;protein_id=WP_042975650.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 33859 34725 . + . ID=gene-LDO49_RS07750;Name=LDO49_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07750;old_locus_tag=BCEP4_1350037 NZ_CAJZAV010000041.1 Protein Homology CDS 33859 34725 . + 0 ID=cds-WP_060147612.1;Parent=gene-LDO49_RS07750;Dbxref=GenBank:WP_060147612.1;Name=WP_060147612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549097.1;locus_tag=LDO49_RS07750;product=NmrA family NAD(P)-binding protein;protein_id=WP_060147612.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 34945 35352 . + . ID=gene-LDO49_RS07755;Name=LDO49_RS07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07755;old_locus_tag=BCEP4_1350038 NZ_CAJZAV010000041.1 Protein Homology CDS 34945 35352 . + 0 ID=cds-WP_048027470.1;Parent=gene-LDO49_RS07755;Dbxref=GenBank:WP_048027470.1;Name=WP_048027470.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336927.1;locus_tag=LDO49_RS07755;product=MAPEG family protein;protein_id=WP_048027470.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 35327 36337 . + . ID=gene-LDO49_RS07760;Name=LDO49_RS07760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07760;old_locus_tag=BCEP4_1350039 NZ_CAJZAV010000041.1 Protein Homology CDS 35327 36337 . + 0 ID=cds-WP_443797925.1;Parent=gene-LDO49_RS07760;Dbxref=GenBank:WP_443797925.1;Name=WP_443797925.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549095.1;locus_tag=LDO49_RS07760;product=PLP-dependent cysteine synthase family protein;protein_id=WP_443797925.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 37325 37924 . + . ID=gene-LDO49_RS07765;Name=LDO49_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07765;old_locus_tag=BCEP4_1350042 NZ_CAJZAV010000041.1 Protein Homology CDS 37325 37924 . + 0 ID=cds-WP_021160481.1;Parent=gene-LDO49_RS07765;Dbxref=GenBank:WP_021160481.1;Name=WP_021160481.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011002019.1;locus_tag=LDO49_RS07765;product=LysE family translocator;protein_id=WP_021160481.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 38422 40038 . + . ID=gene-LDO49_RS07770;Name=LDO49_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07770;old_locus_tag=BCEP4_1350046 NZ_CAJZAV010000041.1 Protein Homology CDS 38422 40038 . + 0 ID=cds-WP_060147611.1;Parent=gene-LDO49_RS07770;Dbxref=GenBank:WP_060147611.1;Name=WP_060147611.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009898811.1;locus_tag=LDO49_RS07770;product=tryptophan halogenase family protein;protein_id=WP_060147611.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 40038 41123 . + . ID=gene-LDO49_RS07775;Name=LDO49_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07775;old_locus_tag=BCEP4_1350047 NZ_CAJZAV010000041.1 Protein Homology CDS 40038 41123 . + 0 ID=cds-WP_060147610.1;Parent=gene-LDO49_RS07775;Dbxref=GenBank:WP_060147610.1;Name=WP_060147610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010110543.1;locus_tag=LDO49_RS07775;product=monodechloroaminopyrrolnitrin synthase PrnB family protein;protein_id=WP_060147610.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 41182 42882 . + . ID=gene-LDO49_RS07780;Name=LDO49_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07780;old_locus_tag=BCEP4_1350048 NZ_CAJZAV010000041.1 Protein Homology CDS 41182 42882 . + 0 ID=cds-WP_021160484.1;Parent=gene-LDO49_RS07780;Dbxref=GenBank:WP_021160484.1;Name=WP_021160484.1;Ontology_term=GO:0000166,GO:0016491,GO:0071949;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524919.1;locus_tag=LDO49_RS07780;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_021160484.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 42907 44019 . + . ID=gene-LDO49_RS07785;Name=LDO49_RS07785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07785;old_locus_tag=BCEP4_1350049 NZ_CAJZAV010000041.1 Protein Homology CDS 42907 44019 . + 0 ID=cds-WP_060147609.1;Parent=gene-LDO49_RS07785;Dbxref=GenBank:WP_060147609.1;Name=WP_060147609.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853814.1;locus_tag=LDO49_RS07785;product=Rieske 2Fe-2S domain-containing protein;protein_id=WP_060147609.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 44305 44562 . - . ID=gene-LDO49_RS07790;Name=LDO49_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07790;old_locus_tag=BCEP4_1350050 NZ_CAJZAV010000041.1 Protein Homology CDS 44305 44562 . - 0 ID=cds-WP_060147608.1;Parent=gene-LDO49_RS07790;Dbxref=GenBank:WP_060147608.1;Name=WP_060147608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012427068.1;locus_tag=LDO49_RS07790;product=DUF4148 domain-containing protein;protein_id=WP_060147608.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 44763 45440 . + . ID=gene-LDO49_RS07795;Name=LDO49_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07795;old_locus_tag=BCEP4_1350052 NZ_CAJZAV010000041.1 Protein Homology CDS 44763 45440 . + 0 ID=cds-WP_021160488.1;Parent=gene-LDO49_RS07795;Dbxref=GenBank:WP_021160488.1;Name=WP_021160488.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411957.1;locus_tag=LDO49_RS07795;product=heavy metal response regulator transcription factor;protein_id=WP_021160488.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 45437 46951 . + . ID=gene-LDO49_RS07800;Name=LDO49_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07800;old_locus_tag=BCEP4_1350051 NZ_CAJZAV010000041.1 Protein Homology CDS 45437 46951 . + 0 ID=cds-WP_060147607.1;Parent=gene-LDO49_RS07800;Dbxref=GenBank:WP_060147607.1;Name=WP_060147607.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691531.1;locus_tag=LDO49_RS07800;product=heavy metal sensor histidine kinase;protein_id=WP_060147607.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 46932 48488 . - . ID=gene-LDO49_RS07805;Name=LDO49_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07805;old_locus_tag=BCEP4_1350053 NZ_CAJZAV010000041.1 Protein Homology CDS 46932 48488 . - 0 ID=cds-WP_060147606.1;Parent=gene-LDO49_RS07805;Dbxref=GenBank:WP_060147606.1;Name=WP_060147606.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726121.1;locus_tag=LDO49_RS07805;product=efflux transporter outer membrane subunit;protein_id=WP_060147606.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 48519 49898 . - . ID=gene-LDO49_RS07810;Name=LDO49_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07810;old_locus_tag=BCEP4_1350054 NZ_CAJZAV010000041.1 Protein Homology CDS 48519 49898 . - 0 ID=cds-WP_060147605.1;Parent=gene-LDO49_RS07810;Dbxref=GenBank:WP_060147605.1;Name=WP_060147605.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493782.1;locus_tag=LDO49_RS07810;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_060147605.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 49964 53191 . - . ID=gene-LDO49_RS07815;Name=LDO49_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07815;old_locus_tag=BCEP4_1350055 NZ_CAJZAV010000041.1 Protein Homology CDS 49964 53191 . - 0 ID=cds-WP_060147604.1;Parent=gene-LDO49_RS07815;Dbxref=GenBank:WP_060147604.1;Name=WP_060147604.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545696.1;locus_tag=LDO49_RS07815;product=efflux RND transporter permease subunit;protein_id=WP_060147604.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 53461 53739 . + . ID=gene-LDO49_RS07820;Name=LDO49_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07820;old_locus_tag=BCEP4_1350058 NZ_CAJZAV010000041.1 Protein Homology CDS 53461 53739 . + 0 ID=cds-WP_021160494.1;Parent=gene-LDO49_RS07820;Dbxref=GenBank:WP_021160494.1;Name=WP_021160494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754572.1;locus_tag=LDO49_RS07820;product=DUF4148 domain-containing protein;protein_id=WP_021160494.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 53754 54017 . + . ID=gene-LDO49_RS07825;Name=LDO49_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07825;old_locus_tag=BCEP4_1350057 NZ_CAJZAV010000041.1 Protein Homology CDS 53754 54017 . + 0 ID=cds-WP_060147603.1;Parent=gene-LDO49_RS07825;Dbxref=GenBank:WP_060147603.1;Name=WP_060147603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761656.1;locus_tag=LDO49_RS07825;product=hypothetical protein;protein_id=WP_060147603.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 54564 55526 . + . ID=gene-LDO49_RS07830;Name=LDO49_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07830;old_locus_tag=BCEP4_1350060 NZ_CAJZAV010000041.1 Protein Homology CDS 54564 55526 . + 0 ID=cds-WP_021160497.1;Parent=gene-LDO49_RS07830;Dbxref=GenBank:WP_021160497.1;Name=WP_021160497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880603.1;locus_tag=LDO49_RS07830;product=ABC transporter substrate-binding protein;protein_id=WP_021160497.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 55610 57124 . + . ID=gene-LDO49_RS07835;Name=LDO49_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07835;old_locus_tag=BCEP4_1350061 NZ_CAJZAV010000041.1 Protein Homology CDS 55610 57124 . + 0 ID=cds-WP_048027437.1;Parent=gene-LDO49_RS07835;Dbxref=GenBank:WP_048027437.1;Name=WP_048027437.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481193.1;locus_tag=LDO49_RS07835;product=sugar ABC transporter ATP-binding protein;protein_id=WP_048027437.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 57121 58161 . + . ID=gene-LDO49_RS07840;Name=LDO49_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07840;old_locus_tag=BCEP4_1350062 NZ_CAJZAV010000041.1 Protein Homology CDS 57121 58161 . + 0 ID=cds-WP_048027436.1;Parent=gene-LDO49_RS07840;Dbxref=GenBank:WP_048027436.1;Name=WP_048027436.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891042.1;locus_tag=LDO49_RS07840;product=ABC transporter permease;protein_id=WP_048027436.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 58158 59246 . + . ID=gene-LDO49_RS07845;Name=yjfF;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;locus_tag=LDO49_RS07845;old_locus_tag=BCEP4_1350063 NZ_CAJZAV010000041.1 Protein Homology CDS 58158 59246 . + 0 ID=cds-WP_059587328.1;Parent=gene-LDO49_RS07845;Dbxref=GenBank:WP_059587328.1;Name=WP_059587328.1;Ontology_term=GO:0042875,GO:0103116,GO:0016020;gbkey=CDS;gene=yjfF;go_component=membrane|0016020||IEA;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481195.1;locus_tag=LDO49_RS07845;product=galactofuranose ABC transporter%2C permease protein YjfF;protein_id=WP_059587328.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 59357 60445 . - . ID=gene-LDO49_RS07850;Name=LDO49_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07850;old_locus_tag=BCEP4_1350065 NZ_CAJZAV010000041.1 Protein Homology CDS 59357 60445 . - 0 ID=cds-WP_224051588.1;Parent=gene-LDO49_RS07850;Dbxref=GenBank:WP_224051588.1;Name=WP_224051588.1;Ontology_term=GO:0005975,GO:0016857,GO:0030246;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216976.1;locus_tag=LDO49_RS07850;product=aldose epimerase family protein;protein_id=WP_224051588.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 60473 61666 . - . ID=gene-LDO49_RS07855;Name=LDO49_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07855;old_locus_tag=BCEP4_1350066 NZ_CAJZAV010000041.1 Protein Homology CDS 60473 61666 . - 0 ID=cds-WP_021164181.1;Parent=gene-LDO49_RS07855;Dbxref=GenBank:WP_021164181.1;Name=WP_021164181.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403516.1;locus_tag=LDO49_RS07855;product=XylR family transcriptional regulator;protein_id=WP_021164181.1;transl_table=11 NZ_CAJZAV010000041.1 RefSeq gene 61931 63253 . + . ID=gene-LDO49_RS07860;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=LDO49_RS07860;old_locus_tag=BCEP4_1350064 NZ_CAJZAV010000041.1 Protein Homology CDS 61931 63253 . + 0 ID=cds-WP_048027433.1;Parent=gene-LDO49_RS07860;Dbxref=GenBank:WP_048027433.1;Name=WP_048027433.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880506.1;locus_tag=LDO49_RS07860;product=xylose isomerase;protein_id=WP_048027433.1;transl_table=11 ##sequence-region NZ_CAJZAV010000042.1 1 11046 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000042.1 RefSeq region 1 11046 . + . ID=NZ_CAJZAV010000042.1:1..11046;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_136 NZ_CAJZAV010000042.1 RefSeq pseudogene 1 221 . - . ID=gene-LDO49_RS37860;Name=LDO49_RS37860;end_range=221,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37860;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000042.1 Protein Homology CDS 1 221 . - 2 ID=cds-LDO49_RS37860;Parent=gene-LDO49_RS37860;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=221,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365428.1;locus_tag=LDO49_RS37860;partial=true;product=cyanate transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000042.1 RefSeq pseudogene 232 379 . - . ID=gene-LDO49_RS37865;Name=LDO49_RS37865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37865;old_locus_tag=BCEP4_1360002;partial=true;pseudo=true;start_range=.,232 NZ_CAJZAV010000042.1 Protein Homology CDS 232 379 . - 0 ID=cds-LDO49_RS37865;Parent=gene-LDO49_RS37865;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365428.1;locus_tag=LDO49_RS37865;partial=true;product=cyanate transporter;pseudo=true;start_range=.,232;transl_table=11 NZ_CAJZAV010000042.1 RefSeq gene 586 1443 . - . ID=gene-LDO49_RS07865;Name=LDO49_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07865;old_locus_tag=BCEP4_1360003 NZ_CAJZAV010000042.1 Protein Homology CDS 586 1443 . - 0 ID=cds-WP_021163571.1;Parent=gene-LDO49_RS07865;Dbxref=GenBank:WP_021163571.1;Name=WP_021163571.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548355.1;locus_tag=LDO49_RS07865;product=helix-turn-helix transcriptional regulator;protein_id=WP_021163571.1;transl_table=11 NZ_CAJZAV010000042.1 RefSeq gene 1539 2432 . + . ID=gene-LDO49_RS07870;Name=LDO49_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07870;old_locus_tag=BCEP4_1360004 NZ_CAJZAV010000042.1 Protein Homology CDS 1539 2432 . + 0 ID=cds-WP_060071113.1;Parent=gene-LDO49_RS07870;Dbxref=GenBank:WP_060071113.1;Name=WP_060071113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548354.1;locus_tag=LDO49_RS07870;product=SDR family oxidoreductase;protein_id=WP_060071113.1;transl_table=11 NZ_CAJZAV010000042.1 RefSeq gene 2490 2621 . - . ID=gene-LDO49_RS37270;Name=LDO49_RS37270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37270 NZ_CAJZAV010000042.1 GeneMarkS-2+ CDS 2490 2621 . - 0 ID=cds-WP_260429803.1;Parent=gene-LDO49_RS37270;Dbxref=GenBank:WP_260429803.1;Name=WP_260429803.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37270;product=hypothetical protein;protein_id=WP_260429803.1;transl_table=11 NZ_CAJZAV010000042.1 RefSeq gene 2702 5692 . + . ID=gene-LDO49_RS07875;Name=LDO49_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07875;old_locus_tag=BCEP4_1360005 NZ_CAJZAV010000042.1 Protein Homology CDS 2702 5692 . + 0 ID=cds-WP_063811975.1;Parent=gene-LDO49_RS07875;Dbxref=GenBank:WP_063811975.1;Name=WP_063811975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660306.1;locus_tag=LDO49_RS07875;product=amino acid adenylation domain-containing protein;protein_id=WP_063811975.1;transl_table=11 NZ_CAJZAV010000042.1 RefSeq gene 5755 7134 . - . ID=gene-LDO49_RS07880;Name=LDO49_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07880;old_locus_tag=BCEP4_1360006 NZ_CAJZAV010000042.1 Protein Homology CDS 5755 7134 . - 0 ID=cds-WP_059653696.1;Parent=gene-LDO49_RS07880;Dbxref=GenBank:WP_059653696.1;Name=WP_059653696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356056.1;locus_tag=LDO49_RS07880;product=FAD-containing oxidoreductase;protein_id=WP_059653696.1;transl_table=11 NZ_CAJZAV010000042.1 RefSeq gene 7343 7921 . - . ID=gene-LDO49_RS07885;Name=LDO49_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07885;old_locus_tag=BCEP4_1360007 NZ_CAJZAV010000042.1 Protein Homology CDS 7343 7921 . - 0 ID=cds-WP_021163577.1;Parent=gene-LDO49_RS07885;Dbxref=GenBank:WP_021163577.1;Name=WP_021163577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414014.1;locus_tag=LDO49_RS07885;product=hypothetical protein;protein_id=WP_021163577.1;transl_table=11 NZ_CAJZAV010000042.1 RefSeq gene 7971 8435 . - . ID=gene-LDO49_RS07890;Name=LDO49_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07890;old_locus_tag=BCEP4_1360008 NZ_CAJZAV010000042.1 Protein Homology CDS 7971 8435 . - 0 ID=cds-WP_059484739.1;Parent=gene-LDO49_RS07890;Dbxref=GenBank:WP_059484739.1;Name=WP_059484739.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495610.1;locus_tag=LDO49_RS07890;product=GNAT family N-acetyltransferase;protein_id=WP_059484739.1;transl_table=11 NZ_CAJZAV010000042.1 RefSeq gene 8584 9222 . + . ID=gene-LDO49_RS07895;Name=LDO49_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07895;old_locus_tag=BCEP4_1360009 NZ_CAJZAV010000042.1 Protein Homology CDS 8584 9222 . + 0 ID=cds-WP_027790869.1;Parent=gene-LDO49_RS07895;Dbxref=GenBank:WP_027790869.1;Name=WP_027790869.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338617.1;locus_tag=LDO49_RS07895;product=LysE family translocator;protein_id=WP_027790869.1;transl_table=11 NZ_CAJZAV010000042.1 RefSeq gene 9302 10513 . - . ID=gene-LDO49_RS07900;Name=LDO49_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07900;old_locus_tag=BCEP4_1360010 NZ_CAJZAV010000042.1 Protein Homology CDS 9302 10513 . - 0 ID=cds-WP_060071118.1;Parent=gene-LDO49_RS07900;Dbxref=GenBank:WP_060071118.1;Name=WP_060071118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356052.1;locus_tag=LDO49_RS07900;product=hypothetical protein;protein_id=WP_060071118.1;transl_table=11 NZ_CAJZAV010000042.1 RefSeq gene 10851 11046 . + . ID=gene-LDO49_RS07905;Name=LDO49_RS07905;end_range=11046,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07905;partial=true NZ_CAJZAV010000042.1 Protein Homology CDS 10851 11046 . + 0 ID=cds-WP_224051589.1;Parent=gene-LDO49_RS07905;Dbxref=GenBank:WP_224051589.1;Name=WP_224051589.1;end_range=11046,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479650.1;locus_tag=LDO49_RS07905;partial=true;product=DUF3348 family protein;protein_id=WP_224051589.1;transl_table=11 ##sequence-region NZ_CAJZAV010000043.1 1 35105 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000043.1 RefSeq region 1 35105 . + . ID=NZ_CAJZAV010000043.1:1..35105;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_137 NZ_CAJZAV010000043.1 RefSeq pseudogene 1 126 . + . ID=gene-LDO49_RS07910;Name=LDO49_RS07910;end_range=126,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS07910;old_locus_tag=BCEP4_1370001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000043.1 Protein Homology CDS 1 126 . + 0 ID=cds-LDO49_RS07910;Parent=gene-LDO49_RS07910;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=126,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187270.1;locus_tag=LDO49_RS07910;partial=true;product=2-aminoethylphosphonate aminotransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 165 1103 . + . ID=gene-LDO49_RS07915;Name=LDO49_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07915;old_locus_tag=BCEP4_1370002 NZ_CAJZAV010000043.1 Protein Homology CDS 165 1103 . + 0 ID=cds-WP_224051590.1;Parent=gene-LDO49_RS07915;Dbxref=GenBank:WP_224051590.1;Name=WP_224051590.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493755.1;locus_tag=LDO49_RS07915;product=c-type cytochrome;protein_id=WP_224051590.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 1156 3078 . - . ID=gene-LDO49_RS07920;Name=LDO49_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07920;old_locus_tag=BCEP4_1370003 NZ_CAJZAV010000043.1 Protein Homology CDS 1156 3078 . - 0 ID=cds-WP_021161188.1;Parent=gene-LDO49_RS07920;Dbxref=GenBank:WP_021161188.1;Name=WP_021161188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405949.1;locus_tag=LDO49_RS07920;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_021161188.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 3539 3970 . - . ID=gene-LDO49_RS07930;Name=LDO49_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07930;old_locus_tag=BCEP4_1370005 NZ_CAJZAV010000043.1 Protein Homology CDS 3539 3970 . - 0 ID=cds-WP_021161185.1;Parent=gene-LDO49_RS07930;Dbxref=GenBank:WP_021161185.1;Name=WP_021161185.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490053.1;locus_tag=LDO49_RS07930;product=GFA family protein;protein_id=WP_021161185.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 4071 5264 . - . ID=gene-LDO49_RS07935;Name=LDO49_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07935;old_locus_tag=BCEP4_1370006 NZ_CAJZAV010000043.1 Protein Homology CDS 4071 5264 . - 0 ID=cds-WP_048025442.1;Parent=gene-LDO49_RS07935;Dbxref=GenBank:WP_048025442.1;Name=WP_048025442.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757855.1;locus_tag=LDO49_RS07935;product=porin;protein_id=WP_048025442.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 5570 6202 . + . ID=gene-LDO49_RS07940;Name=LDO49_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07940;old_locus_tag=BCEP4_1370007 NZ_CAJZAV010000043.1 Protein Homology CDS 5570 6202 . + 0 ID=cds-WP_021161182.1;Parent=gene-LDO49_RS07940;Dbxref=GenBank:WP_021161182.1;Name=WP_021161182.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339425.1;locus_tag=LDO49_RS07940;product=LysE family translocator;protein_id=WP_021161182.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 6215 6751 . + . ID=gene-LDO49_RS07945;Name=LDO49_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07945;old_locus_tag=BCEP4_1370008 NZ_CAJZAV010000043.1 Protein Homology CDS 6215 6751 . + 0 ID=cds-WP_060073232.1;Parent=gene-LDO49_RS07945;Dbxref=GenBank:WP_060073232.1;Name=WP_060073232.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546941.1;locus_tag=LDO49_RS07945;product=GNAT family N-acetyltransferase;protein_id=WP_060073232.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 6896 7630 . + . ID=gene-LDO49_RS07950;Name=LDO49_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07950;old_locus_tag=BCEP4_1370010 NZ_CAJZAV010000043.1 Protein Homology CDS 6896 7630 . + 0 ID=cds-WP_060073234.1;Parent=gene-LDO49_RS07950;Dbxref=GenBank:WP_060073234.1;Name=WP_060073234.1;Ontology_term=GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898402.1;locus_tag=LDO49_RS07950;product=metallophosphoesterase family protein;protein_id=WP_060073234.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 7684 8295 . + . ID=gene-LDO49_RS07955;Name=LDO49_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07955;old_locus_tag=BCEP4_1370009 NZ_CAJZAV010000043.1 Protein Homology CDS 7684 8295 . + 0 ID=cds-WP_059619799.1;Parent=gene-LDO49_RS07955;Dbxref=GenBank:WP_059619799.1;Name=WP_059619799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354013.1;locus_tag=LDO49_RS07955;product=alpha/beta fold hydrolase;protein_id=WP_059619799.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 8516 9469 . + . ID=gene-LDO49_RS07960;Name=LDO49_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07960;old_locus_tag=BCEP4_1370011 NZ_CAJZAV010000043.1 Protein Homology CDS 8516 9469 . + 0 ID=cds-WP_224051599.1;Parent=gene-LDO49_RS07960;Dbxref=GenBank:WP_224051599.1;Name=WP_224051599.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659175.1;locus_tag=LDO49_RS07960;product=DMT family transporter;protein_id=WP_224051599.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 9655 10203 . + . ID=gene-LDO49_RS07965;Name=LDO49_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07965;old_locus_tag=BCEP4_1370012 NZ_CAJZAV010000043.1 Protein Homology CDS 9655 10203 . + 0 ID=cds-WP_059619276.1;Parent=gene-LDO49_RS07965;Dbxref=GenBank:WP_059619276.1;Name=WP_059619276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485834.1;locus_tag=LDO49_RS07965;product=hypothetical protein;protein_id=WP_059619276.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 10297 10431 . - . ID=gene-LDO49_RS07970;Name=LDO49_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07970;old_locus_tag=BCEP4_1370013 NZ_CAJZAV010000043.1 Protein Homology CDS 10297 10431 . - 0 ID=cds-WP_021158165.1;Parent=gene-LDO49_RS07970;Dbxref=GenBank:WP_021158165.1;Name=WP_021158165.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010109044.1;locus_tag=LDO49_RS07970;product=entericidin A/B family lipoprotein;protein_id=WP_021158165.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 10665 11960 . + . ID=gene-LDO49_RS07975;Name=LDO49_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07975;old_locus_tag=BCEP4_1370014 NZ_CAJZAV010000043.1 Protein Homology CDS 10665 11960 . + 0 ID=cds-WP_021158163.1;Parent=gene-LDO49_RS07975;Dbxref=GenBank:WP_021158163.1;Name=WP_021158163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254972.1;locus_tag=LDO49_RS07975;product=aspartate carbamoyltransferase;protein_id=WP_021158163.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 12096 12515 . - . ID=gene-LDO49_RS07980;Name=LDO49_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07980;old_locus_tag=BCEP4_1370015 NZ_CAJZAV010000043.1 Protein Homology CDS 12096 12515 . - 0 ID=cds-WP_021158162.1;Parent=gene-LDO49_RS07980;Dbxref=GenBank:WP_021158162.1;Name=WP_021158162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758103.1;locus_tag=LDO49_RS07980;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_021158162.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 12512 12751 . - . ID=gene-LDO49_RS07985;Name=LDO49_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07985;old_locus_tag=BCEP4_1370016 NZ_CAJZAV010000043.1 Protein Homology CDS 12512 12751 . - 0 ID=cds-WP_021158161.1;Parent=gene-LDO49_RS07985;Dbxref=GenBank:WP_021158161.1;Name=WP_021158161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003812071.1;locus_tag=LDO49_RS07985;product=FitA-like ribbon-helix-helix domain-containing protein;protein_id=WP_021158161.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 13062 15308 . + . ID=gene-LDO49_RS07990;Name=LDO49_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07990;old_locus_tag=BCEP4_1370017 NZ_CAJZAV010000043.1 Protein Homology CDS 13062 15308 . + 0 ID=cds-WP_060070393.1;Parent=gene-LDO49_RS07990;Dbxref=GenBank:WP_060070393.1;Name=WP_060070393.1;Ontology_term=GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543178.1;locus_tag=LDO49_RS07990;product=TonB-dependent receptor;protein_id=WP_060070393.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 15312 16073 . + . ID=gene-LDO49_RS07995;Name=LDO49_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS07995;old_locus_tag=BCEP4_1370019 NZ_CAJZAV010000043.1 Protein Homology CDS 15312 16073 . + 0 ID=cds-WP_060070396.1;Parent=gene-LDO49_RS07995;Dbxref=GenBank:WP_060070396.1;Name=WP_060070396.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216642.1;locus_tag=LDO49_RS07995;product=tetratricopeptide repeat protein;protein_id=WP_060070396.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 16070 16753 . + . ID=gene-LDO49_RS08000;Name=LDO49_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08000;old_locus_tag=BCEP4_1370018 NZ_CAJZAV010000043.1 Protein Homology CDS 16070 16753 . + 0 ID=cds-WP_224051592.1;Parent=gene-LDO49_RS08000;Dbxref=GenBank:WP_224051592.1;Name=WP_224051592.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089453.1;locus_tag=LDO49_RS08000;product=Fe2+-dependent dioxygenase;protein_id=WP_224051592.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 16841 17080 . + . ID=gene-LDO49_RS08005;Name=LDO49_RS08005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08005;old_locus_tag=BCEP4_1370020 NZ_CAJZAV010000043.1 Protein Homology CDS 16841 17080 . + 0 ID=cds-WP_011659184.1;Parent=gene-LDO49_RS08005;Dbxref=GenBank:WP_011659184.1;Name=WP_011659184.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089452.1;locus_tag=LDO49_RS08005;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_011659184.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 17077 17472 . + . ID=gene-LDO49_RS08010;Name=LDO49_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08010;old_locus_tag=BCEP4_1370021 NZ_CAJZAV010000043.1 Protein Homology CDS 17077 17472 . + 0 ID=cds-WP_042973908.1;Parent=gene-LDO49_RS08010;Dbxref=GenBank:WP_042973908.1;Name=WP_042973908.1;Ontology_term=GO:0004540,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA nuclease activity|0004540||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659185.1;locus_tag=LDO49_RS08010;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_042973908.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 17629 18309 . + . ID=gene-LDO49_RS08015;Name=LDO49_RS08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08015;old_locus_tag=BCEP4_1370022 NZ_CAJZAV010000043.1 Protein Homology CDS 17629 18309 . + 0 ID=cds-WP_224051594.1;Parent=gene-LDO49_RS08015;Dbxref=GenBank:WP_224051594.1;Name=WP_224051594.1;Ontology_term=GO:0006508,GO:0008237,GO:0016805;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547332.1;locus_tag=LDO49_RS08015;product=M15 family metallopeptidase;protein_id=WP_224051594.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 18413 18997 . + . ID=gene-LDO49_RS08020;Name=LDO49_RS08020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08020;old_locus_tag=BCEP4_1370023 NZ_CAJZAV010000043.1 Protein Homology CDS 18413 18997 . + 0 ID=cds-WP_060070402.1;Parent=gene-LDO49_RS08020;Dbxref=GenBank:WP_060070402.1;Name=WP_060070402.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396642.1;locus_tag=LDO49_RS08020;product=nucleotidyltransferase family protein;protein_id=WP_060070402.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 19201 19341 . + . ID=gene-LDO49_RS08025;Name=LDO49_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08025;old_locus_tag=BCEP4_1370024 NZ_CAJZAV010000043.1 Protein Homology CDS 19201 19341 . + 0 ID=cds-WP_021158153.1;Parent=gene-LDO49_RS08025;Dbxref=GenBank:WP_021158153.1;Name=WP_021158153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548972.1;locus_tag=LDO49_RS08025;product=hypothetical protein;protein_id=WP_021158153.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 19420 20178 . - . ID=gene-LDO49_RS08030;Name=LDO49_RS08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08030;old_locus_tag=BCEP4_1370025 NZ_CAJZAV010000043.1 Protein Homology CDS 19420 20178 . - 0 ID=cds-WP_048023212.1;Parent=gene-LDO49_RS08030;Dbxref=GenBank:WP_048023212.1;Name=WP_048023212.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191609.1;locus_tag=LDO49_RS08030;product=SDR family oxidoreductase;protein_id=WP_048023212.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 20175 21722 . - . ID=gene-LDO49_RS08035;Name=LDO49_RS08035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08035;old_locus_tag=BCEP4_1370026 NZ_CAJZAV010000043.1 Protein Homology CDS 20175 21722 . - 0 ID=cds-WP_224051596.1;Parent=gene-LDO49_RS08035;Dbxref=GenBank:WP_224051596.1;Name=WP_224051596.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485839.1;locus_tag=LDO49_RS08035;product=FGGY-family carbohydrate kinase;protein_id=WP_224051596.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 21752 22840 . - . ID=gene-LDO49_RS08040;Name=LDO49_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08040;old_locus_tag=BCEP4_1370027 NZ_CAJZAV010000043.1 Protein Homology CDS 21752 22840 . - 0 ID=cds-WP_060070408.1;Parent=gene-LDO49_RS08040;Dbxref=GenBank:WP_060070408.1;Name=WP_060070408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366468.1;locus_tag=LDO49_RS08040;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_060070408.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 22887 23900 . - . ID=gene-LDO49_RS08045;Name=LDO49_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08045;old_locus_tag=BCEP4_1370028 NZ_CAJZAV010000043.1 Protein Homology CDS 22887 23900 . - 0 ID=cds-WP_224051598.1;Parent=gene-LDO49_RS08045;Dbxref=GenBank:WP_224051598.1;Name=WP_224051598.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216635.1;locus_tag=LDO49_RS08045;product=ABC transporter permease;protein_id=WP_224051598.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 23887 25407 . - . ID=gene-LDO49_RS08050;Name=LDO49_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08050;old_locus_tag=BCEP4_1370029 NZ_CAJZAV010000043.1 Protein Homology CDS 23887 25407 . - 0 ID=cds-WP_060070411.1;Parent=gene-LDO49_RS08050;Dbxref=GenBank:WP_060070411.1;Name=WP_060070411.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396635.1;locus_tag=LDO49_RS08050;product=sugar ABC transporter ATP-binding protein;protein_id=WP_060070411.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 25465 26406 . - . ID=gene-LDO49_RS08055;Name=LDO49_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08055;old_locus_tag=BCEP4_1370030 NZ_CAJZAV010000043.1 Protein Homology CDS 25465 26406 . - 0 ID=cds-WP_059710443.1;Parent=gene-LDO49_RS08055;Dbxref=GenBank:WP_059710443.1;Name=WP_059710443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496167.1;locus_tag=LDO49_RS08055;product=substrate-binding domain-containing protein;protein_id=WP_059710443.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 26525 27484 . - . ID=gene-LDO49_RS08060;Name=LDO49_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08060;old_locus_tag=BCEP4_1370031 NZ_CAJZAV010000043.1 Protein Homology CDS 26525 27484 . - 0 ID=cds-WP_048023218.1;Parent=gene-LDO49_RS08060;Dbxref=GenBank:WP_048023218.1;Name=WP_048023218.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480884.1;locus_tag=LDO49_RS08060;product=AraC family transcriptional regulator;protein_id=WP_048023218.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 27716 28663 . - . ID=gene-LDO49_RS08065;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=LDO49_RS08065;old_locus_tag=BCEP4_1370032 NZ_CAJZAV010000043.1 Protein Homology CDS 27716 28663 . - 0 ID=cds-WP_059485432.1;Parent=gene-LDO49_RS08065;Dbxref=GenBank:WP_059485432.1;Name=WP_059485432.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216631.1;locus_tag=LDO49_RS08065;product=2-dehydropantoate 2-reductase;protein_id=WP_059485432.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 28901 30454 . + . ID=gene-LDO49_RS08070;Name=LDO49_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08070;old_locus_tag=BCEP4_1370033 NZ_CAJZAV010000043.1 Protein Homology CDS 28901 30454 . + 0 ID=cds-WP_059492133.1;Parent=gene-LDO49_RS08070;Dbxref=GenBank:WP_059492133.1;Name=WP_059492133.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216630.1;locus_tag=LDO49_RS08070;product=methyl-accepting chemotaxis protein;protein_id=WP_059492133.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 30480 31157 . - . ID=gene-LDO49_RS08075;Name=LDO49_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08075;old_locus_tag=BCEP4_1370034 NZ_CAJZAV010000043.1 Protein Homology CDS 30480 31157 . - 0 ID=cds-WP_059677585.1;Parent=gene-LDO49_RS08075;Dbxref=GenBank:WP_059677585.1;Name=WP_059677585.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482022.1;locus_tag=LDO49_RS08075;product=response regulator transcription factor;protein_id=WP_059677585.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq pseudogene 31445 31648 . + . ID=gene-LDO49_RS37870;Name=LDO49_RS37870;end_range=31648,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37870;partial=true;pseudo=true NZ_CAJZAV010000043.1 Protein Homology CDS 31445 31648 . + 0 ID=cds-LDO49_RS37870;Parent=gene-LDO49_RS37870;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=31648,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754328.1;locus_tag=LDO49_RS37870;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 31738 32147 . + . ID=gene-LDO49_RS08080;Name=LDO49_RS08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08080;old_locus_tag=BCEP4_1370036;partial=true;start_range=.,31738 NZ_CAJZAV010000043.1 Protein Homology CDS 31738 32147 . + 2 ID=cds-WP_443797926.1;Parent=gene-LDO49_RS08080;Dbxref=GenBank:WP_443797926.1;Name=WP_443797926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354486.1;locus_tag=LDO49_RS08080;partial=true;product=hypothetical protein;protein_id=WP_443797926.1;start_range=.,31738;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 32173 32679 . - . ID=gene-LDO49_RS08085;Name=LDO49_RS08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08085;old_locus_tag=BCEP4_1370037 NZ_CAJZAV010000043.1 Protein Homology CDS 32173 32679 . - 0 ID=cds-WP_060070414.1;Parent=gene-LDO49_RS08085;Dbxref=GenBank:WP_060070414.1;Name=WP_060070414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482025.1;locus_tag=LDO49_RS08085;product=hypothetical protein;protein_id=WP_060070414.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 32812 34233 . - . ID=gene-LDO49_RS08090;Name=LDO49_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08090;old_locus_tag=BCEP4_1370038 NZ_CAJZAV010000043.1 Protein Homology CDS 32812 34233 . - 0 ID=cds-WP_104767138.1;Parent=gene-LDO49_RS08090;Dbxref=GenBank:WP_104767138.1;Name=WP_104767138.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354484.1;locus_tag=LDO49_RS08090;product=sigma-54 dependent transcriptional regulator;protein_id=WP_104767138.1;transl_table=11 NZ_CAJZAV010000043.1 RefSeq gene 34344 34928 . - . ID=gene-LDO49_RS08095;Name=LDO49_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08095;old_locus_tag=BCEP4_1370039 NZ_CAJZAV010000043.1 Protein Homology CDS 34344 34928 . - 0 ID=cds-WP_021156315.1;Parent=gene-LDO49_RS08095;Dbxref=GenBank:WP_021156315.1;Name=WP_021156315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480876.1;locus_tag=LDO49_RS08095;product=hypothetical protein;protein_id=WP_021156315.1;transl_table=11 ##sequence-region NZ_CAJZAV010000044.1 1 18528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000044.1 RefSeq region 1 18528 . + . ID=NZ_CAJZAV010000044.1:1..18528;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_138 NZ_CAJZAV010000044.1 RefSeq gene 1 985 . + . ID=gene-LDO49_RS08100;Name=LDO49_RS08100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08100;old_locus_tag=BCEP4_1380001;partial=true;start_range=.,1 NZ_CAJZAV010000044.1 Protein Homology CDS 1 985 . + 1 ID=cds-WP_224051600.1;Parent=gene-LDO49_RS08100;Dbxref=GenBank:WP_224051600.1;Name=WP_224051600.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497997.1;locus_tag=LDO49_RS08100;partial=true;product=FAD-binding oxidoreductase;protein_id=WP_224051600.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000044.1 RefSeq gene 1018 1266 . + . ID=gene-LDO49_RS08105;Name=LDO49_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08105;old_locus_tag=BCEP4_1380002 NZ_CAJZAV010000044.1 Protein Homology CDS 1018 1266 . + 0 ID=cds-WP_224051601.1;Parent=gene-LDO49_RS08105;Dbxref=GenBank:WP_224051601.1;Name=WP_224051601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482540.1;locus_tag=LDO49_RS08105;product=hypothetical protein;protein_id=WP_224051601.1;transl_table=11 NZ_CAJZAV010000044.1 RefSeq gene 1367 2719 . - . ID=gene-LDO49_RS08110;Name=LDO49_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08110;old_locus_tag=BCEP4_1380003 NZ_CAJZAV010000044.1 Protein Homology CDS 1367 2719 . - 0 ID=cds-WP_027792027.1;Parent=gene-LDO49_RS08110;Dbxref=GenBank:WP_027792027.1;Name=WP_027792027.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350121.1;locus_tag=LDO49_RS08110;product=TRAP transporter large permease;protein_id=WP_027792027.1;transl_table=11 NZ_CAJZAV010000044.1 RefSeq gene 2724 3296 . - . ID=gene-LDO49_RS08115;Name=LDO49_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08115;old_locus_tag=BCEP4_1380004 NZ_CAJZAV010000044.1 Protein Homology CDS 2724 3296 . - 0 ID=cds-WP_059483982.1;Parent=gene-LDO49_RS08115;Dbxref=GenBank:WP_059483982.1;Name=WP_059483982.1;Ontology_term=GO:0015740,GO:0022857,GO:0005886,GO:0016020,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493692.1;locus_tag=LDO49_RS08115;product=TRAP transporter small permease;protein_id=WP_059483982.1;transl_table=11 NZ_CAJZAV010000044.1 RefSeq gene 3293 4279 . - . ID=gene-LDO49_RS08120;Name=LDO49_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08120;old_locus_tag=BCEP4_1380005 NZ_CAJZAV010000044.1 Protein Homology CDS 3293 4279 . - 0 ID=cds-WP_048027553.1;Parent=gene-LDO49_RS08120;Dbxref=GenBank:WP_048027553.1;Name=WP_048027553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726257.1;locus_tag=LDO49_RS08120;product=TRAP transporter substrate-binding protein;protein_id=WP_048027553.1;transl_table=11 NZ_CAJZAV010000044.1 RefSeq gene 4739 5824 . - . ID=gene-LDO49_RS08125;Name=LDO49_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08125;old_locus_tag=BCEP4_1380006 NZ_CAJZAV010000044.1 Protein Homology CDS 4739 5824 . - 0 ID=cds-WP_224051602.1;Parent=gene-LDO49_RS08125;Dbxref=GenBank:WP_224051602.1;Name=WP_224051602.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350131.1;locus_tag=LDO49_RS08125;product=helix-turn-helix transcriptional regulator;protein_id=WP_224051602.1;transl_table=11 NZ_CAJZAV010000044.1 RefSeq gene 5961 7370 . + . ID=gene-LDO49_RS08130;Name=LDO49_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08130;old_locus_tag=BCEP4_1380007 NZ_CAJZAV010000044.1 Protein Homology CDS 5961 7370 . + 0 ID=cds-WP_224051603.1;Parent=gene-LDO49_RS08130;Dbxref=GenBank:WP_224051603.1;Name=WP_224051603.1;Ontology_term=GO:0000105,GO:0004400,GO:0030170;gbkey=CDS;go_function=histidinol-phosphate transaminase activity|0004400||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: protein motif:HMM:NF002877.0;locus_tag=LDO49_RS08130;product=histidinol-phosphate transaminase;protein_id=WP_224051603.1;transl_table=11 NZ_CAJZAV010000044.1 RefSeq gene 7434 7685 . - . ID=gene-LDO49_RS08135;Name=LDO49_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08135;old_locus_tag=BCEP4_1380008 NZ_CAJZAV010000044.1 Protein Homology CDS 7434 7685 . - 0 ID=cds-WP_042975551.1;Parent=gene-LDO49_RS08135;Dbxref=GenBank:WP_042975551.1;Name=WP_042975551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350133.1;locus_tag=LDO49_RS08135;product=hypothetical protein;protein_id=WP_042975551.1;transl_table=11 NZ_CAJZAV010000044.1 RefSeq gene 8177 8353 . - . ID=gene-LDO49_RS08140;Name=LDO49_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08140;old_locus_tag=BCEP4_1380010 NZ_CAJZAV010000044.1 GeneMarkS-2+ CDS 8177 8353 . - 0 ID=cds-WP_224051605.1;Parent=gene-LDO49_RS08140;Dbxref=GenBank:WP_224051605.1;Name=WP_224051605.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS08140;product=hypothetical protein;protein_id=WP_224051605.1;transl_table=11 NZ_CAJZAV010000044.1 RefSeq gene 8467 8955 . - . ID=gene-LDO49_RS08145;Name=LDO49_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08145;old_locus_tag=BCEP4_1380011 NZ_CAJZAV010000044.1 Protein Homology CDS 8467 8955 . - 0 ID=cds-WP_224051607.1;Parent=gene-LDO49_RS08145;Dbxref=GenBank:WP_224051607.1;Name=WP_224051607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350135.1;locus_tag=LDO49_RS08145;product=RidA family protein;protein_id=WP_224051607.1;transl_table=11 NZ_CAJZAV010000044.1 RefSeq gene 9236 9535 . + . ID=gene-LDO49_RS08150;Name=LDO49_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08150;old_locus_tag=BCEP4_1380012 NZ_CAJZAV010000044.1 Protein Homology CDS 9236 9535 . + 0 ID=cds-WP_021160271.1;Parent=gene-LDO49_RS08150;Dbxref=GenBank:WP_021160271.1;Name=WP_021160271.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481154.1;locus_tag=LDO49_RS08150;product=H-NS histone family protein;protein_id=WP_021160271.1;transl_table=11 NZ_CAJZAV010000044.1 RefSeq gene 9708 10040 . - . ID=gene-LDO49_RS08155;Name=LDO49_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08155;old_locus_tag=BCEP4_1380013 NZ_CAJZAV010000044.1 Protein Homology CDS 9708 10040 . - 0 ID=cds-WP_021160270.1;Parent=gene-LDO49_RS08155;Dbxref=GenBank:WP_021160270.1;Name=WP_021160270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483368.1;locus_tag=LDO49_RS08155;product=cupin domain-containing protein;protein_id=WP_021160270.1;transl_table=11 NZ_CAJZAV010000044.1 RefSeq pseudogene 10456 10730 . + . ID=gene-LDO49_RS08160;Name=LDO49_RS08160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS08160;partial=true;pseudo=true;start_range=.,10456 NZ_CAJZAV010000044.1 Protein Homology CDS 10456 10730 . + 0 ID=cds-LDO49_RS08160;Parent=gene-LDO49_RS08160;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015866259.1;locus_tag=LDO49_RS08160;partial=true;product=integrase;pseudo=true;start_range=.,10456;transl_table=11 NZ_CAJZAV010000044.1 RefSeq gene 10871 11113 . - . ID=gene-LDO49_RS08165;Name=LDO49_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08165;old_locus_tag=BCEP4_1380015 NZ_CAJZAV010000044.1 GeneMarkS-2+ CDS 10871 11113 . - 0 ID=cds-WP_224051609.1;Parent=gene-LDO49_RS08165;Dbxref=GenBank:WP_224051609.1;Name=WP_224051609.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS08165;product=hypothetical protein;protein_id=WP_224051609.1;transl_table=11 NZ_CAJZAV010000044.1 RefSeq gene 11233 12303 . - . ID=gene-LDO49_RS08170;Name=LDO49_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08170;old_locus_tag=BCEP4_1380016 NZ_CAJZAV010000044.1 Protein Homology CDS 11233 12303 . - 0 ID=cds-WP_059495806.1;Parent=gene-LDO49_RS08170;Dbxref=GenBank:WP_059495806.1;Name=WP_059495806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489168.1;locus_tag=LDO49_RS08170;product=substrate-binding domain-containing protein;protein_id=WP_059495806.1;transl_table=11 NZ_CAJZAV010000044.1 RefSeq gene 12554 13570 . + . ID=gene-LDO49_RS08175;Name=LDO49_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08175;old_locus_tag=BCEP4_1380018 NZ_CAJZAV010000044.1 Protein Homology CDS 12554 13570 . + 0 ID=cds-WP_059489418.1;Parent=gene-LDO49_RS08175;Dbxref=GenBank:WP_059489418.1;Name=WP_059489418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691485.1;locus_tag=LDO49_RS08175;product=sugar ABC transporter substrate-binding protein;protein_id=WP_059489418.1;transl_table=11 NZ_CAJZAV010000044.1 RefSeq gene 13567 15117 . + . ID=gene-LDO49_RS08180;Name=LDO49_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08180;old_locus_tag=BCEP4_1380019 NZ_CAJZAV010000044.1 Protein Homology CDS 13567 15117 . + 0 ID=cds-WP_059816444.1;Parent=gene-LDO49_RS08180;Dbxref=GenBank:WP_059816444.1;Name=WP_059816444.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006052642.1;locus_tag=LDO49_RS08180;product=sugar ABC transporter ATP-binding protein;protein_id=WP_059816444.1;transl_table=11 NZ_CAJZAV010000044.1 RefSeq gene 15114 16142 . + . ID=gene-LDO49_RS08185;Name=LDO49_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08185;old_locus_tag=BCEP4_1380020 NZ_CAJZAV010000044.1 Protein Homology CDS 15114 16142 . + 0 ID=cds-WP_059652238.1;Parent=gene-LDO49_RS08185;Dbxref=GenBank:WP_059652238.1;Name=WP_059652238.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876228.1;locus_tag=LDO49_RS08185;product=ABC transporter permease;protein_id=WP_059652238.1;transl_table=11 NZ_CAJZAV010000044.1 RefSeq gene 16135 17094 . + . ID=gene-LDO49_RS08190;Name=LDO49_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08190;old_locus_tag=BCEP4_1380021 NZ_CAJZAV010000044.1 Protein Homology CDS 16135 17094 . + 0 ID=cds-WP_059489414.1;Parent=gene-LDO49_RS08190;Dbxref=GenBank:WP_059489414.1;Name=WP_059489414.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006052640.1;locus_tag=LDO49_RS08190;product=ABC transporter permease;protein_id=WP_059489414.1;transl_table=11 NZ_CAJZAV010000044.1 RefSeq gene 17132 18187 . - . ID=gene-LDO49_RS08195;Name=LDO49_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08195;old_locus_tag=BCEP4_1380022 NZ_CAJZAV010000044.1 Protein Homology CDS 17132 18187 . - 0 ID=cds-WP_372585832.1;Parent=gene-LDO49_RS08195;Dbxref=GenBank:WP_372585832.1;Name=WP_372585832.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335420.1;locus_tag=LDO49_RS08195;product=ABC transporter permease;protein_id=WP_372585832.1;transl_table=11 NZ_CAJZAV010000044.1 RefSeq gene 18200 18528 . - . ID=gene-LDO49_RS08200;Name=LDO49_RS08200;end_range=18528,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08200;old_locus_tag=BCEP4_1380023;partial=true NZ_CAJZAV010000044.1 Protein Homology CDS 18200 18528 . - 2 ID=cds-WP_224051612.1;Parent=gene-LDO49_RS08200;Dbxref=GenBank:WP_224051612.1;Name=WP_224051612.1;Ontology_term=GO:0005524;end_range=18528,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335419.1;locus_tag=LDO49_RS08200;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_224051612.1;transl_table=11 ##sequence-region NZ_CAJZAV010000045.1 1 28558 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000045.1 RefSeq region 1 28558 . + . ID=NZ_CAJZAV010000045.1:1..28558;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_139 NZ_CAJZAV010000045.1 RefSeq gene 17 1141 . - . ID=gene-LDO49_RS08205;Name=LDO49_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08205;old_locus_tag=BCEP4_1390001 NZ_CAJZAV010000045.1 Protein Homology CDS 17 1141 . - 0 ID=cds-WP_060148042.1;Parent=gene-LDO49_RS08205;Dbxref=GenBank:WP_060148042.1;Name=WP_060148042.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:NF012935.6;locus_tag=LDO49_RS08205;product=GMC family oxidoreductase;protein_id=WP_060148042.1;transl_table=11 NZ_CAJZAV010000045.1 RefSeq gene 1199 2344 . - . ID=gene-LDO49_RS08210;Name=LDO49_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08210;old_locus_tag=BCEP4_1390002 NZ_CAJZAV010000045.1 Protein Homology CDS 1199 2344 . - 0 ID=cds-WP_224051614.1;Parent=gene-LDO49_RS08210;Dbxref=GenBank:WP_224051614.1;Name=WP_224051614.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019845.6;locus_tag=LDO49_RS08210;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_224051614.1;transl_table=11 NZ_CAJZAV010000045.1 RefSeq gene 2474 3397 . + . ID=gene-LDO49_RS08215;Name=LDO49_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08215;old_locus_tag=BCEP4_1390003 NZ_CAJZAV010000045.1 Protein Homology CDS 2474 3397 . + 0 ID=cds-WP_060148039.1;Parent=gene-LDO49_RS08215;Dbxref=GenBank:WP_060148039.1;Name=WP_060148039.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.6;locus_tag=LDO49_RS08215;product=LysR substrate-binding domain-containing protein;protein_id=WP_060148039.1;transl_table=11 NZ_CAJZAV010000045.1 RefSeq pseudogene 3531 3647 . - . ID=gene-LDO49_RS08220;Name=LDO49_RS08220;end_range=3647,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS08220;partial=true;pseudo=true;start_range=.,3531 NZ_CAJZAV010000045.1 Protein Homology CDS 3531 3647 . - 0 ID=cds-LDO49_RS08220;Parent=gene-LDO49_RS08220;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015074;end_range=3647,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611445.1;locus_tag=LDO49_RS08220;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,3531;transl_table=11 NZ_CAJZAV010000045.1 RefSeq pseudogene 3655 3845 . + . ID=gene-LDO49_RS08225;Name=LDO49_RS08225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS08225;partial=true;pseudo=true;start_range=.,3655 NZ_CAJZAV010000045.1 Protein Homology CDS 3655 3845 . + 0 ID=cds-LDO49_RS08225;Parent=gene-LDO49_RS08225;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611899.1;locus_tag=LDO49_RS08225;partial=true;product=IS5/IS1182 family transposase;pseudo=true;start_range=.,3655;transl_table=11 NZ_CAJZAV010000045.1 RefSeq gene 3908 5047 . - . ID=gene-LDO49_RS08230;Name=LDO49_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08230;old_locus_tag=BCEP4_1390004 NZ_CAJZAV010000045.1 Protein Homology CDS 3908 5047 . - 0 ID=cds-WP_060148037.1;Parent=gene-LDO49_RS08230;Dbxref=GenBank:WP_060148037.1;Name=WP_060148037.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412509.1;locus_tag=LDO49_RS08230;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_060148037.1;transl_table=11 NZ_CAJZAV010000045.1 RefSeq gene 5447 6475 . - . ID=gene-LDO49_RS08235;Name=LDO49_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08235;old_locus_tag=BCEP4_1390005 NZ_CAJZAV010000045.1 Protein Homology CDS 5447 6475 . - 0 ID=cds-WP_124476050.1;Parent=gene-LDO49_RS08235;Dbxref=GenBank:WP_124476050.1;Name=WP_124476050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479373.1;locus_tag=LDO49_RS08235;product=lipase secretion chaperone;protein_id=WP_124476050.1;transl_table=11 NZ_CAJZAV010000045.1 RefSeq pseudogene 6535 7450 . - . ID=gene-LDO49_RS08240;Name=LDO49_RS08240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS08240;old_locus_tag=BCEP4_1390007;pseudo=true NZ_CAJZAV010000045.1 Protein Homology CDS 6535 7450 . - 0 ID=cds-LDO49_RS08240;Parent=gene-LDO49_RS08240;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018436823.1;locus_tag=LDO49_RS08240;product=hydroxymethylglutaryl-CoA lyase;pseudo=true;transl_table=11 NZ_CAJZAV010000045.1 RefSeq gene 7489 9216 . - . ID=gene-LDO49_RS08245;Name=LDO49_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08245;old_locus_tag=BCEP4_1390008 NZ_CAJZAV010000045.1 Protein Homology CDS 7489 9216 . - 0 ID=cds-WP_224051615.1;Parent=gene-LDO49_RS08245;Dbxref=GenBank:WP_224051615.1;Name=WP_224051615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017772240.1;locus_tag=LDO49_RS08245;product=AMP-binding protein;protein_id=WP_224051615.1;transl_table=11 NZ_CAJZAV010000045.1 RefSeq gene 9339 10457 . - . ID=gene-LDO49_RS08250;Name=LDO49_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08250;old_locus_tag=BCEP4_1390009 NZ_CAJZAV010000045.1 Protein Homology CDS 9339 10457 . - 0 ID=cds-WP_060148023.1;Parent=gene-LDO49_RS08250;Dbxref=GenBank:WP_060148023.1;Name=WP_060148023.1;Ontology_term=GO:0016042,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011400969.1;locus_tag=LDO49_RS08250;product=esterase/lipase family protein;protein_id=WP_060148023.1;transl_table=11 NZ_CAJZAV010000045.1 RefSeq gene 10554 11348 . - . ID=gene-LDO49_RS08255;Name=LDO49_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08255;old_locus_tag=BCEP4_1390010 NZ_CAJZAV010000045.1 Protein Homology CDS 10554 11348 . - 0 ID=cds-WP_124475800.1;Parent=gene-LDO49_RS08255;Dbxref=GenBank:WP_124475800.1;Name=WP_124475800.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: protein motif:HMM:NF024242.6;locus_tag=LDO49_RS08255;product=helix-turn-helix domain-containing protein;protein_id=WP_124475800.1;transl_table=11 NZ_CAJZAV010000045.1 RefSeq pseudogene 11854 12000 . + . ID=gene-LDO49_RS08260;Name=LDO49_RS08260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS08260;partial=true;pseudo=true;start_range=.,11854 NZ_CAJZAV010000045.1 Protein Homology CDS 11854 12000 . + 0 ID=cds-LDO49_RS08260;Parent=gene-LDO49_RS08260;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218215.1;locus_tag=LDO49_RS08260;partial=true;product=universal stress protein;pseudo=true;start_range=.,11854;transl_table=11 NZ_CAJZAV010000045.1 RefSeq gene 12013 14304 . - . ID=gene-LDO49_RS08265;Name=LDO49_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08265;old_locus_tag=BCEP4_1390013 NZ_CAJZAV010000045.1 Protein Homology CDS 12013 14304 . - 0 ID=cds-WP_060148021.1;Parent=gene-LDO49_RS08265;Dbxref=GenBank:WP_060148021.1;Name=WP_060148021.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218216.1;locus_tag=LDO49_RS08265;product=heavy metal translocating P-type ATPase;protein_id=WP_060148021.1;transl_table=11 NZ_CAJZAV010000045.1 RefSeq gene 14533 15150 . + . ID=gene-LDO49_RS08270;Name=LDO49_RS08270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08270;old_locus_tag=BCEP4_1390014 NZ_CAJZAV010000045.1 Protein Homology CDS 14533 15150 . + 0 ID=cds-WP_060148001.1;Parent=gene-LDO49_RS08270;Dbxref=GenBank:WP_060148001.1;Name=WP_060148001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488463.1;locus_tag=LDO49_RS08270;product=hypothetical protein;protein_id=WP_060148001.1;transl_table=11 NZ_CAJZAV010000045.1 RefSeq gene 15398 16153 . - . ID=gene-LDO49_RS08275;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=LDO49_RS08275;old_locus_tag=BCEP4_1390015 NZ_CAJZAV010000045.1 Protein Homology CDS 15398 16153 . - 0 ID=cds-WP_059587559.1;Parent=gene-LDO49_RS08275;Dbxref=GenBank:WP_059587559.1;Name=WP_059587559.1;Ontology_term=GO:0006355,GO:0006547,GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-histidine metabolic process|0006547||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549290.1;locus_tag=LDO49_RS08275;product=histidine utilization repressor;protein_id=WP_059587559.1;transl_table=11 NZ_CAJZAV010000045.1 RefSeq gene 16218 17711 . - . ID=gene-LDO49_RS08280;Name=LDO49_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08280;old_locus_tag=BCEP4_1390016 NZ_CAJZAV010000045.1 Protein Homology CDS 16218 17711 . - 0 ID=cds-WP_060147999.1;Parent=gene-LDO49_RS08280;Dbxref=GenBank:WP_060147999.1;Name=WP_060147999.1;Ontology_term=GO:0170035,GO:0016841;gbkey=CDS;go_function=ammonia-lyase activity|0016841||IEA;go_process=L-amino acid catabolic process|0170035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751562.1;locus_tag=LDO49_RS08280;product=HAL/PAL/TAL family ammonia-lyase;protein_id=WP_060147999.1;transl_table=11 NZ_CAJZAV010000045.1 RefSeq gene 17719 18510 . - . ID=gene-LDO49_RS08285;Name=LDO49_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08285;old_locus_tag=BCEP4_1390017 NZ_CAJZAV010000045.1 Protein Homology CDS 17719 18510 . - 0 ID=cds-WP_021158296.1;Parent=gene-LDO49_RS08285;Dbxref=GenBank:WP_021158296.1;Name=WP_021158296.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013592029.1;locus_tag=LDO49_RS08285;product=ABC transporter ATP-binding protein;protein_id=WP_021158296.1;transl_table=11 NZ_CAJZAV010000045.1 RefSeq gene 18538 19284 . - . ID=gene-LDO49_RS08290;Name=LDO49_RS08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08290;old_locus_tag=BCEP4_1390018 NZ_CAJZAV010000045.1 Protein Homology CDS 18538 19284 . - 0 ID=cds-WP_060147997.1;Parent=gene-LDO49_RS08290;Dbxref=GenBank:WP_060147997.1;Name=WP_060147997.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337093.1;locus_tag=LDO49_RS08290;product=ABC transporter permease;protein_id=WP_060147997.1;transl_table=11 NZ_CAJZAV010000045.1 RefSeq gene 19297 20019 . - . ID=gene-LDO49_RS08295;Name=LDO49_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08295;old_locus_tag=BCEP4_1390019 NZ_CAJZAV010000045.1 Protein Homology CDS 19297 20019 . - 0 ID=cds-WP_021158294.1;Parent=gene-LDO49_RS08295;Dbxref=GenBank:WP_021158294.1;Name=WP_021158294.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007587161.1;locus_tag=LDO49_RS08295;product=ABC transporter permease;protein_id=WP_021158294.1;transl_table=11 NZ_CAJZAV010000045.1 RefSeq gene 20112 20978 . - . ID=gene-LDO49_RS08300;Name=LDO49_RS08300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08300;old_locus_tag=BCEP4_1390020 NZ_CAJZAV010000045.1 Protein Homology CDS 20112 20978 . - 0 ID=cds-WP_060148019.1;Parent=gene-LDO49_RS08300;Dbxref=GenBank:WP_060148019.1;Name=WP_060148019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753459.1;locus_tag=LDO49_RS08300;product=transporter substrate-binding domain-containing protein;protein_id=WP_060148019.1;transl_table=11 NZ_CAJZAV010000045.1 RefSeq gene 21870 22316 . - . ID=gene-LDO49_RS08310;Name=LDO49_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08310;old_locus_tag=BCEP4_1390021 NZ_CAJZAV010000045.1 Protein Homology CDS 21870 22316 . - 0 ID=cds-WP_060147995.1;Parent=gene-LDO49_RS08310;Dbxref=GenBank:WP_060147995.1;Name=WP_060147995.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013092656.1;locus_tag=LDO49_RS08310;product=DoxX family protein;protein_id=WP_060147995.1;transl_table=11 NZ_CAJZAV010000045.1 RefSeq gene 22318 24210 . - . ID=gene-LDO49_RS08315;Name=LDO49_RS08315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08315;old_locus_tag=BCEP4_1390022 NZ_CAJZAV010000045.1 Protein Homology CDS 22318 24210 . - 0 ID=cds-WP_048027062.1;Parent=gene-LDO49_RS08315;Dbxref=GenBank:WP_048027062.1;Name=WP_048027062.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482680.1;locus_tag=LDO49_RS08315;product=amidohydrolase;protein_id=WP_048027062.1;transl_table=11 NZ_CAJZAV010000045.1 RefSeq gene 24230 24397 . - . ID=gene-LDO49_RS08320;Name=LDO49_RS08320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08320;old_locus_tag=BCEP4_1390023 NZ_CAJZAV010000045.1 Protein Homology CDS 24230 24397 . - 0 ID=cds-WP_009692709.1;Parent=gene-LDO49_RS08320;Dbxref=GenBank:WP_009692709.1;Name=WP_009692709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897309.1;locus_tag=LDO49_RS08320;product=DUF1427 family protein;protein_id=WP_009692709.1;transl_table=11 NZ_CAJZAV010000045.1 RefSeq gene 24567 25253 . - . ID=gene-LDO49_RS08325;Name=LDO49_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08325;old_locus_tag=BCEP4_1390024 NZ_CAJZAV010000045.1 Protein Homology CDS 24567 25253 . - 0 ID=cds-WP_021158289.1;Parent=gene-LDO49_RS08325;Dbxref=GenBank:WP_021158289.1;Name=WP_021158289.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337464.1;locus_tag=LDO49_RS08325;product=hydrolase;protein_id=WP_021158289.1;transl_table=11 NZ_CAJZAV010000045.1 RefSeq gene 25564 25845 . + . ID=gene-LDO49_RS08330;Name=LDO49_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08330;old_locus_tag=BCEP4_1390025 NZ_CAJZAV010000045.1 Protein Homology CDS 25564 25845 . + 0 ID=cds-WP_021158288.1;Parent=gene-LDO49_RS08330;Dbxref=GenBank:WP_021158288.1;Name=WP_021158288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484374.1;locus_tag=LDO49_RS08330;product=XapX domain-containing protein;protein_id=WP_021158288.1;transl_table=11 NZ_CAJZAV010000045.1 RefSeq gene 25961 26869 . + . ID=gene-LDO49_RS08335;Name=LDO49_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08335;old_locus_tag=BCEP4_1390026 NZ_CAJZAV010000045.1 Protein Homology CDS 25961 26869 . + 0 ID=cds-WP_060147993.1;Parent=gene-LDO49_RS08335;Dbxref=GenBank:WP_060147993.1;Name=WP_060147993.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660706.1;locus_tag=LDO49_RS08335;product=LysR family transcriptional regulator;protein_id=WP_060147993.1;transl_table=11 NZ_CAJZAV010000045.1 RefSeq gene 26922 28385 . - . ID=gene-LDO49_RS08340;Name=LDO49_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08340;old_locus_tag=BCEP4_1390027 NZ_CAJZAV010000045.1 Protein Homology CDS 26922 28385 . - 0 ID=cds-WP_059492973.1;Parent=gene-LDO49_RS08340;Dbxref=GenBank:WP_059492973.1;Name=WP_059492973.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545658.1;locus_tag=LDO49_RS08340;product=mechanosensitive ion channel family protein;protein_id=WP_059492973.1;transl_table=11 ##sequence-region NZ_CAJZAV010000046.1 1 59982 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000046.1 RefSeq region 1 59982 . + . ID=NZ_CAJZAV010000046.1:1..59982;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_14 NZ_CAJZAV010000046.1 RefSeq gene 68 1261 . + . ID=gene-LDO49_RS08345;Name=bktB;gbkey=Gene;gene=bktB;gene_biotype=protein_coding;locus_tag=LDO49_RS08345;old_locus_tag=BCEP4_140001 NZ_CAJZAV010000046.1 Protein Homology CDS 68 1261 . + 0 ID=cds-WP_048028343.1;Parent=gene-LDO49_RS08345;Dbxref=GenBank:WP_048028343.1;Name=WP_048028343.1;Ontology_term=GO:0003985;gbkey=CDS;gene=bktB;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337245.1;locus_tag=LDO49_RS08345;product=beta-ketothiolase BktB;protein_id=WP_048028343.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 1299 2153 . + . ID=gene-LDO49_RS08350;Name=LDO49_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08350;old_locus_tag=BCEP4_140002 NZ_CAJZAV010000046.1 Protein Homology CDS 1299 2153 . + 0 ID=cds-WP_048028345.1;Parent=gene-LDO49_RS08350;Dbxref=GenBank:WP_048028345.1;Name=WP_048028345.1;Ontology_term=GO:0006631;gbkey=CDS;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337246.1;locus_tag=LDO49_RS08350;product=3-hydroxybutyryl-CoA dehydrogenase;protein_id=WP_048028345.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 2659 3474 . + . ID=gene-LDO49_RS08355;Name=LDO49_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08355;old_locus_tag=BCEP4_140004 NZ_CAJZAV010000046.1 GeneMarkS-2+ CDS 2659 3474 . + 0 ID=cds-WP_146774233.1;Parent=gene-LDO49_RS08355;Dbxref=GenBank:WP_146774233.1;Name=WP_146774233.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS08355;product=hypothetical protein;protein_id=WP_146774233.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq pseudogene 3564 3665 . + . ID=gene-LDO49_RS08360;Name=LDO49_RS08360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS08360;partial=true;pseudo=true;start_range=.,3564 NZ_CAJZAV010000046.1 Protein Homology CDS 3564 3665 . + 0 ID=cds-LDO49_RS08360;Parent=gene-LDO49_RS08360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006631,GO:0016491,GO:0016616;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012371924.1;locus_tag=LDO49_RS08360;partial=true;product=3-hydroxyacyl-CoA dehydrogenase family protein;pseudo=true;start_range=.,3564;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 3846 5987 . - . ID=gene-LDO49_RS08365;Name=LDO49_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08365;old_locus_tag=BCEP4_140006 NZ_CAJZAV010000046.1 Protein Homology CDS 3846 5987 . - 0 ID=cds-WP_224051616.1;Parent=gene-LDO49_RS08365;Dbxref=GenBank:WP_224051616.1;Name=WP_224051616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660667.1;locus_tag=LDO49_RS08365;product=AprA-related methyltransferase;protein_id=WP_224051616.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 5999 9835 . - . ID=gene-LDO49_RS08370;Name=LDO49_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08370;old_locus_tag=BCEP4_140007 NZ_CAJZAV010000046.1 Protein Homology CDS 5999 9835 . - 0 ID=cds-WP_224051618.1;Parent=gene-LDO49_RS08370;Dbxref=GenBank:WP_224051618.1;Name=WP_224051618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012371922.1;locus_tag=LDO49_RS08370;product=AMP-binding protein;protein_id=WP_224051618.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 9925 10821 . - . ID=gene-LDO49_RS08375;Name=LDO49_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08375;old_locus_tag=BCEP4_140008 NZ_CAJZAV010000046.1 Protein Homology CDS 9925 10821 . - 0 ID=cds-WP_224051620.1;Parent=gene-LDO49_RS08375;Dbxref=GenBank:WP_224051620.1;Name=WP_224051620.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335544.1;locus_tag=LDO49_RS08375;product=MBL fold metallo-hydrolase;protein_id=WP_224051620.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 10827 11825 . - . ID=gene-LDO49_RS08380;Name=LDO49_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08380;old_locus_tag=BCEP4_140009 NZ_CAJZAV010000046.1 Protein Homology CDS 10827 11825 . - 0 ID=cds-WP_060148235.1;Parent=gene-LDO49_RS08380;Dbxref=GenBank:WP_060148235.1;Name=WP_060148235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525514.1;locus_tag=LDO49_RS08380;product=ketoacyl-ACP synthase III;protein_id=WP_060148235.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 11822 12952 . - . ID=gene-LDO49_RS08385;Name=LDO49_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08385;old_locus_tag=BCEP4_140010 NZ_CAJZAV010000046.1 Protein Homology CDS 11822 12952 . - 0 ID=cds-WP_187330140.1;Parent=gene-LDO49_RS08385;Dbxref=GenBank:WP_187330140.1;Name=WP_187330140.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530002.1;locus_tag=LDO49_RS08385;product=3-oxoacyl-ACP synthase III family protein;protein_id=WP_187330140.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 12931 13818 . - . ID=gene-LDO49_RS08390;Name=LDO49_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08390;old_locus_tag=BCEP4_140011 NZ_CAJZAV010000046.1 Protein Homology CDS 12931 13818 . - 0 ID=cds-WP_059621126.1;Parent=gene-LDO49_RS08390;Dbxref=GenBank:WP_059621126.1;Name=WP_059621126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548628.1;locus_tag=LDO49_RS08390;product=hypothetical protein;protein_id=WP_059621126.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 13815 15479 . - . ID=gene-LDO49_RS08395;Name=LDO49_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08395;old_locus_tag=BCEP4_140012 NZ_CAJZAV010000046.1 Protein Homology CDS 13815 15479 . - 0 ID=cds-WP_224051622.1;Parent=gene-LDO49_RS08395;Dbxref=GenBank:WP_224051622.1;Name=WP_224051622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012371917.1;locus_tag=LDO49_RS08395;product=AMP-binding protein;protein_id=WP_224051622.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 16208 16873 . - . ID=gene-LDO49_RS08400;Name=LDO49_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08400;old_locus_tag=BCEP4_140014 NZ_CAJZAV010000046.1 Protein Homology CDS 16208 16873 . - 0 ID=cds-WP_059555889.1;Parent=gene-LDO49_RS08400;Dbxref=GenBank:WP_059555889.1;Name=WP_059555889.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481440.1;locus_tag=LDO49_RS08400;product=TetR/AcrR family transcriptional regulator;protein_id=WP_059555889.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 16967 17797 . + . ID=gene-LDO49_RS08405;Name=LDO49_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08405;old_locus_tag=BCEP4_140015 NZ_CAJZAV010000046.1 Protein Homology CDS 16967 17797 . + 0 ID=cds-WP_224051623.1;Parent=gene-LDO49_RS08405;Dbxref=GenBank:WP_224051623.1;Name=WP_224051623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349572.1;locus_tag=LDO49_RS08405;product=NmrA family transcriptional regulator;protein_id=WP_224051623.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 17794 18279 . + . ID=gene-LDO49_RS08410;Name=LDO49_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08410;old_locus_tag=BCEP4_140016 NZ_CAJZAV010000046.1 Protein Homology CDS 17794 18279 . + 0 ID=cds-WP_060341039.1;Parent=gene-LDO49_RS08410;Dbxref=GenBank:WP_060341039.1;Name=WP_060341039.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489736.1;locus_tag=LDO49_RS08410;product=anthrone oxygenase family protein;protein_id=WP_060341039.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 18305 19105 . - . ID=gene-LDO49_RS08415;Name=LDO49_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08415;old_locus_tag=BCEP4_140017 NZ_CAJZAV010000046.1 Protein Homology CDS 18305 19105 . - 0 ID=cds-WP_042973765.1;Parent=gene-LDO49_RS08415;Dbxref=GenBank:WP_042973765.1;Name=WP_042973765.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349574.1;locus_tag=LDO49_RS08415;product=AraC family transcriptional regulator;protein_id=WP_042973765.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 19195 20103 . + . ID=gene-LDO49_RS08420;Name=LDO49_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08420;old_locus_tag=BCEP4_140018 NZ_CAJZAV010000046.1 Protein Homology CDS 19195 20103 . + 0 ID=cds-WP_027792389.1;Parent=gene-LDO49_RS08420;Dbxref=GenBank:WP_027792389.1;Name=WP_027792389.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489731.1;locus_tag=LDO49_RS08420;product=DMT family transporter;protein_id=WP_027792389.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 20130 21077 . + . ID=gene-LDO49_RS08425;Name=LDO49_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08425;old_locus_tag=BCEP4_140019 NZ_CAJZAV010000046.1 Protein Homology CDS 20130 21077 . + 0 ID=cds-WP_372585833.1;Parent=gene-LDO49_RS08425;Dbxref=GenBank:WP_372585833.1;Name=WP_372585833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349576.1;locus_tag=LDO49_RS08425;product=ATP-binding protein;protein_id=WP_372585833.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 21086 21952 . - . ID=gene-LDO49_RS08430;Name=LDO49_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08430;old_locus_tag=BCEP4_140020 NZ_CAJZAV010000046.1 Protein Homology CDS 21086 21952 . - 0 ID=cds-WP_060148245.1;Parent=gene-LDO49_RS08430;Dbxref=GenBank:WP_060148245.1;Name=WP_060148245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545739.1;locus_tag=LDO49_RS08430;product=DUF2071 domain-containing protein;protein_id=WP_060148245.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 22060 22701 . - . ID=gene-LDO49_RS08435;Name=LDO49_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08435;old_locus_tag=BCEP4_140021 NZ_CAJZAV010000046.1 Protein Homology CDS 22060 22701 . - 0 ID=cds-WP_224051626.1;Parent=gene-LDO49_RS08435;Dbxref=GenBank:WP_224051626.1;Name=WP_224051626.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899356.1;locus_tag=LDO49_RS08435;product=ankyrin repeat domain-containing protein;protein_id=WP_224051626.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 22795 24297 . - . ID=gene-LDO49_RS08440;Name=LDO49_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08440;old_locus_tag=BCEP4_140022 NZ_CAJZAV010000046.1 Protein Homology CDS 22795 24297 . - 0 ID=cds-WP_372585834.1;Parent=gene-LDO49_RS08440;Dbxref=GenBank:WP_372585834.1;Name=WP_372585834.1;Ontology_term=GO:0004096,GO:0020037,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332846.1;locus_tag=LDO49_RS08440;product=catalase;protein_id=WP_372585834.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 24681 25361 . - . ID=gene-LDO49_RS08445;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=LDO49_RS08445;old_locus_tag=BCEP4_140023 NZ_CAJZAV010000046.1 Protein Homology CDS 24681 25361 . - 0 ID=cds-WP_059494054.1;Parent=gene-LDO49_RS08445;Dbxref=GenBank:WP_059494054.1;Name=WP_059494054.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481432.1;locus_tag=LDO49_RS08445;product=deoxyribose-phosphate aldolase;protein_id=WP_059494054.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 25508 26278 . + . ID=gene-LDO49_RS08450;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=LDO49_RS08450;old_locus_tag=BCEP4_140024 NZ_CAJZAV010000046.1 Protein Homology CDS 25508 26278 . + 0 ID=cds-WP_021157862.1;Parent=gene-LDO49_RS08450;Dbxref=GenBank:WP_021157862.1;Name=WP_021157862.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335555.1;locus_tag=LDO49_RS08450;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_021157862.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 26313 27365 . - . ID=gene-LDO49_RS08455;Name=LDO49_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08455;old_locus_tag=BCEP4_140025 NZ_CAJZAV010000046.1 Protein Homology CDS 26313 27365 . - 0 ID=cds-WP_224051628.1;Parent=gene-LDO49_RS08455;Dbxref=GenBank:WP_224051628.1;Name=WP_224051628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545735.1;locus_tag=LDO49_RS08455;product=aldose 1-epimerase family protein;protein_id=WP_224051628.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 27368 28741 . - . ID=gene-LDO49_RS08460;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=LDO49_RS08460;old_locus_tag=BCEP4_140026 NZ_CAJZAV010000046.1 Protein Homology CDS 27368 28741 . - 0 ID=cds-WP_224051630.1;Parent=gene-LDO49_RS08460;Dbxref=GenBank:WP_224051630.1;Name=WP_224051630.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489743.1;locus_tag=LDO49_RS08460;product=L-fucose:H+ symporter permease;protein_id=WP_224051630.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 28783 29709 . - . ID=gene-LDO49_RS08465;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=LDO49_RS08465;old_locus_tag=BCEP4_140027 NZ_CAJZAV010000046.1 Protein Homology CDS 28783 29709 . - 0 ID=cds-WP_059555877.1;Parent=gene-LDO49_RS08465;Dbxref=GenBank:WP_059555877.1;Name=WP_059555877.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767512.1;locus_tag=LDO49_RS08465;product=ribokinase;protein_id=WP_059555877.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 30043 30720 . - . ID=gene-LDO49_RS08470;Name=LDO49_RS08470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08470;old_locus_tag=BCEP4_140028 NZ_CAJZAV010000046.1 GeneMarkS-2+ CDS 30043 30720 . - 0 ID=cds-WP_224051632.1;Parent=gene-LDO49_RS08470;Dbxref=GenBank:WP_224051632.1;Name=WP_224051632.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS08470;product=hypothetical protein;protein_id=WP_224051632.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 30973 31830 . - . ID=gene-LDO49_RS08475;Name=LDO49_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08475;old_locus_tag=BCEP4_140029 NZ_CAJZAV010000046.1 Protein Homology CDS 30973 31830 . - 0 ID=cds-WP_224051633.1;Parent=gene-LDO49_RS08475;Dbxref=GenBank:WP_224051633.1;Name=WP_224051633.1;Ontology_term=GO:0009058,GO:0016853,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isomerase activity|0016853||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481351.1;locus_tag=LDO49_RS08475;product=PhzF family phenazine biosynthesis protein;protein_id=WP_224051633.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 31918 32736 . - . ID=gene-LDO49_RS08480;Name=LDO49_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08480;old_locus_tag=BCEP4_140031 NZ_CAJZAV010000046.1 Protein Homology CDS 31918 32736 . - 0 ID=cds-WP_059555872.1;Parent=gene-LDO49_RS08480;Dbxref=GenBank:WP_059555872.1;Name=WP_059555872.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349603.1;locus_tag=LDO49_RS08480;product=TrmB family transcriptional regulator;protein_id=WP_059555872.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 32876 33241 . + . ID=gene-LDO49_RS08485;Name=LDO49_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08485;old_locus_tag=BCEP4_140032 NZ_CAJZAV010000046.1 Protein Homology CDS 32876 33241 . + 0 ID=cds-WP_124469901.1;Parent=gene-LDO49_RS08485;Dbxref=GenBank:WP_124469901.1;Name=WP_124469901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545653.1;locus_tag=LDO49_RS08485;product=RidA family protein;protein_id=WP_124469901.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 33238 34443 . + . ID=gene-LDO49_RS08490;Name=LDO49_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08490;old_locus_tag=BCEP4_140030 NZ_CAJZAV010000046.1 Protein Homology CDS 33238 34443 . + 0 ID=cds-WP_224051635.1;Parent=gene-LDO49_RS08490;Dbxref=GenBank:WP_224051635.1;Name=WP_224051635.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349605.1;locus_tag=LDO49_RS08490;product=MFS transporter;protein_id=WP_224051635.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 34725 35414 . + . ID=gene-LDO49_RS08495;Name=LDO49_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08495;old_locus_tag=BCEP4_140034 NZ_CAJZAV010000046.1 Protein Homology CDS 34725 35414 . + 0 ID=cds-WP_224051637.1;Parent=gene-LDO49_RS08495;Dbxref=GenBank:WP_224051637.1;Name=WP_224051637.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349606.1;locus_tag=LDO49_RS08495;product=NUDIX hydrolase;protein_id=WP_224051637.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 35662 36633 . - . ID=gene-LDO49_RS08500;Name=LDO49_RS08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08500;old_locus_tag=BCEP4_140035 NZ_CAJZAV010000046.1 Protein Homology CDS 35662 36633 . - 0 ID=cds-WP_059651421.1;Parent=gene-LDO49_RS08500;Dbxref=GenBank:WP_059651421.1;Name=WP_059651421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012247496.1;locus_tag=LDO49_RS08500;product=AraC family transcriptional regulator;protein_id=WP_059651421.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 36728 37558 . + . ID=gene-LDO49_RS08505;Name=LDO49_RS08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08505;old_locus_tag=BCEP4_140036 NZ_CAJZAV010000046.1 Protein Homology CDS 36728 37558 . + 0 ID=cds-WP_224051639.1;Parent=gene-LDO49_RS08505;Dbxref=GenBank:WP_224051639.1;Name=WP_224051639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879796.1;locus_tag=LDO49_RS08505;product=oxidoreductase;protein_id=WP_224051639.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 37841 38641 . + . ID=gene-LDO49_RS08510;Name=LDO49_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08510;old_locus_tag=BCEP4_140037 NZ_CAJZAV010000046.1 Protein Homology CDS 37841 38641 . + 0 ID=cds-WP_224051641.1;Parent=gene-LDO49_RS08510;Dbxref=GenBank:WP_224051641.1;Name=WP_224051641.1;Ontology_term=GO:0004112;gbkey=CDS;go_function=cyclic-nucleotide phosphodiesterase activity|0004112||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336949.1;locus_tag=LDO49_RS08510;product=phosphodiesterase;protein_id=WP_224051641.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 39029 40033 . + . ID=gene-LDO49_RS08515;Name=LDO49_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08515;old_locus_tag=BCEP4_140039 NZ_CAJZAV010000046.1 Protein Homology CDS 39029 40033 . + 0 ID=cds-WP_224051642.1;Parent=gene-LDO49_RS08515;Dbxref=GenBank:WP_224051642.1;Name=WP_224051642.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018684.6;locus_tag=LDO49_RS08515;product=lysozyme inhibitor LprI family protein;protein_id=WP_224051642.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 40046 40348 . + . ID=gene-LDO49_RS08520;Name=LDO49_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08520;old_locus_tag=BCEP4_140040 NZ_CAJZAV010000046.1 GeneMarkS-2+ CDS 40046 40348 . + 0 ID=cds-WP_224051644.1;Parent=gene-LDO49_RS08520;Dbxref=GenBank:WP_224051644.1;Name=WP_224051644.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS08520;product=hypothetical protein;protein_id=WP_224051644.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 40548 42623 . + . ID=gene-LDO49_RS08525;Name=LDO49_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08525;old_locus_tag=BCEP4_140041 NZ_CAJZAV010000046.1 GeneMarkS-2+ CDS 40548 42623 . + 0 ID=cds-WP_224051645.1;Parent=gene-LDO49_RS08525;Dbxref=GenBank:WP_224051645.1;Name=WP_224051645.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS08525;product=hypothetical protein;protein_id=WP_224051645.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 42831 43235 . - . ID=gene-LDO49_RS08530;Name=LDO49_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08530;old_locus_tag=BCEP4_140044 NZ_CAJZAV010000046.1 Protein Homology CDS 42831 43235 . - 0 ID=cds-WP_224051646.1;Parent=gene-LDO49_RS08530;Dbxref=GenBank:WP_224051646.1;Name=WP_224051646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548560.1;locus_tag=LDO49_RS08530;product=nuclear transport factor 2 family protein;protein_id=WP_224051646.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 43269 43880 . - . ID=gene-LDO49_RS08535;Name=LDO49_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08535;old_locus_tag=BCEP4_140045 NZ_CAJZAV010000046.1 Protein Homology CDS 43269 43880 . - 0 ID=cds-WP_308043830.1;Parent=gene-LDO49_RS08535;Dbxref=GenBank:WP_308043830.1;Name=WP_308043830.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548559.1;locus_tag=LDO49_RS08535;product=alpha/beta hydrolase fold domain-containing protein;protein_id=WP_308043830.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 43928 44845 . - . ID=gene-LDO49_RS08540;Name=LDO49_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08540;old_locus_tag=BCEP4_140046 NZ_CAJZAV010000046.1 Protein Homology CDS 43928 44845 . - 0 ID=cds-WP_224051647.1;Parent=gene-LDO49_RS08540;Dbxref=GenBank:WP_224051647.1;Name=WP_224051647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012371928.1;locus_tag=LDO49_RS08540;product=LysR family transcriptional regulator;protein_id=WP_224051647.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 44987 45751 . + . ID=gene-LDO49_RS08545;Name=LDO49_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08545;old_locus_tag=BCEP4_140047 NZ_CAJZAV010000046.1 Protein Homology CDS 44987 45751 . + 0 ID=cds-WP_224051656.1;Parent=gene-LDO49_RS08545;Dbxref=GenBank:WP_224051656.1;Name=WP_224051656.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013342584.1;locus_tag=LDO49_RS08545;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_224051656.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 45835 46542 . + . ID=gene-LDO49_RS08550;Name=LDO49_RS08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08550;old_locus_tag=BCEP4_140048 NZ_CAJZAV010000046.1 Protein Homology CDS 45835 46542 . + 0 ID=cds-WP_224051648.1;Parent=gene-LDO49_RS08550;Dbxref=GenBank:WP_224051648.1;Name=WP_224051648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548556.1;locus_tag=LDO49_RS08550;product=pirin family protein;protein_id=WP_224051648.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 46893 47729 . + . ID=gene-LDO49_RS08555;Name=LDO49_RS08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08555;old_locus_tag=BCEP4_140049 NZ_CAJZAV010000046.1 Protein Homology CDS 46893 47729 . + 0 ID=cds-WP_021157880.1;Parent=gene-LDO49_RS08555;Dbxref=GenBank:WP_021157880.1;Name=WP_021157880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879797.1;locus_tag=LDO49_RS08555;product=alpha/beta fold hydrolase;protein_id=WP_021157880.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 47856 48776 . - . ID=gene-LDO49_RS08560;Name=LDO49_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08560;old_locus_tag=BCEP4_140050 NZ_CAJZAV010000046.1 Protein Homology CDS 47856 48776 . - 0 ID=cds-WP_042973769.1;Parent=gene-LDO49_RS08560;Dbxref=GenBank:WP_042973769.1;Name=WP_042973769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349611.1;locus_tag=LDO49_RS08560;product=LysR substrate-binding domain-containing protein;protein_id=WP_042973769.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 48942 49592 . + . ID=gene-LDO49_RS08565;Name=LDO49_RS08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08565;old_locus_tag=BCEP4_140051 NZ_CAJZAV010000046.1 Protein Homology CDS 48942 49592 . + 0 ID=cds-WP_111998343.1;Parent=gene-LDO49_RS08565;Dbxref=GenBank:WP_111998343.1;Name=WP_111998343.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337499.1;locus_tag=LDO49_RS08565;product=LysE family translocator;protein_id=WP_111998343.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 49649 50023 . + . ID=gene-LDO49_RS08575;Name=LDO49_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08575;old_locus_tag=BCEP4_140052 NZ_CAJZAV010000046.1 Protein Homology CDS 49649 50023 . + 0 ID=cds-WP_224051649.1;Parent=gene-LDO49_RS08575;Dbxref=GenBank:WP_224051649.1;Name=WP_224051649.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498446.1;locus_tag=LDO49_RS08575;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_224051649.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 50066 50755 . - . ID=gene-LDO49_RS08580;Name=LDO49_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08580;old_locus_tag=BCEP4_140053 NZ_CAJZAV010000046.1 Protein Homology CDS 50066 50755 . - 0 ID=cds-WP_048028434.1;Parent=gene-LDO49_RS08580;Dbxref=GenBank:WP_048028434.1;Name=WP_048028434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337500.1;locus_tag=LDO49_RS08580;product=DUF3142 domain-containing protein;protein_id=WP_048028434.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 50808 52988 . - . ID=gene-LDO49_RS08585;Name=LDO49_RS08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08585;old_locus_tag=BCEP4_140054 NZ_CAJZAV010000046.1 Protein Homology CDS 50808 52988 . - 0 ID=cds-WP_224051650.1;Parent=gene-LDO49_RS08585;Dbxref=GenBank:WP_224051650.1;Name=WP_224051650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498444.1;locus_tag=LDO49_RS08585;product=hypothetical protein;protein_id=WP_224051650.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 53286 53960 . + . ID=gene-LDO49_RS08590;Name=LDO49_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08590;old_locus_tag=BCEP4_140055 NZ_CAJZAV010000046.1 Protein Homology CDS 53286 53960 . + 0 ID=cds-WP_224051652.1;Parent=gene-LDO49_RS08590;Dbxref=GenBank:WP_224051652.1;Name=WP_224051652.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.6;locus_tag=LDO49_RS08590;product=helix-turn-helix transcriptional regulator;protein_id=WP_224051652.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 54006 55418 . - . ID=gene-LDO49_RS08595;Name=LDO49_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08595;old_locus_tag=BCEP4_140056 NZ_CAJZAV010000046.1 Protein Homology CDS 54006 55418 . - 0 ID=cds-WP_224051653.1;Parent=gene-LDO49_RS08595;Dbxref=GenBank:WP_224051653.1;Name=WP_224051653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337505.1;locus_tag=LDO49_RS08595;product=3-deoxy-D-arabino-heptulosonate 7-phosphate synthase;protein_id=WP_224051653.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 55801 56562 . - . ID=gene-LDO49_RS08600;Name=LDO49_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08600;old_locus_tag=BCEP4_140058 NZ_CAJZAV010000046.1 Protein Homology CDS 55801 56562 . - 0 ID=cds-WP_060148274.1;Parent=gene-LDO49_RS08600;Dbxref=GenBank:WP_060148274.1;Name=WP_060148274.1;Ontology_term=GO:0008684,GO:0030145;gbkey=CDS;go_function=2-oxopent-4-enoate hydratase activity|0008684||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372760.1;locus_tag=LDO49_RS08600;product=2-keto-4-pentenoate hydratase;protein_id=WP_060148274.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 56928 57401 . + . ID=gene-LDO49_RS08605;Name=LDO49_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08605;old_locus_tag=BCEP4_140059 NZ_CAJZAV010000046.1 Protein Homology CDS 56928 57401 . + 0 ID=cds-WP_021157889.1;Parent=gene-LDO49_RS08605;Dbxref=GenBank:WP_021157889.1;Name=WP_021157889.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349634.1;locus_tag=LDO49_RS08605;product=universal stress protein;protein_id=WP_021157889.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 57416 57607 . + . ID=gene-LDO49_RS08610;Name=LDO49_RS08610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08610;old_locus_tag=BCEP4_140060 NZ_CAJZAV010000046.1 Protein Homology CDS 57416 57607 . + 0 ID=cds-WP_059486014.1;Parent=gene-LDO49_RS08610;Dbxref=GenBank:WP_059486014.1;Name=WP_059486014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337508.1;locus_tag=LDO49_RS08610;product=DUF2964 family protein;protein_id=WP_059486014.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 57664 58893 . - . ID=gene-LDO49_RS08615;Name=LDO49_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08615;old_locus_tag=BCEP4_140061 NZ_CAJZAV010000046.1 Protein Homology CDS 57664 58893 . - 0 ID=cds-WP_224051655.1;Parent=gene-LDO49_RS08615;Dbxref=GenBank:WP_224051655.1;Name=WP_224051655.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660610.1;locus_tag=LDO49_RS08615;product=tetratricopeptide repeat protein;protein_id=WP_224051655.1;transl_table=11 NZ_CAJZAV010000046.1 RefSeq pseudogene 59177 59549 . + . ID=gene-LDO49_RS37875;Name=LDO49_RS37875;end_range=59549,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37875;old_locus_tag=BCEP4_140062;partial=true;pseudo=true NZ_CAJZAV010000046.1 Protein Homology CDS 59177 59549 . + 0 ID=cds-LDO49_RS37875;Parent=gene-LDO49_RS37875;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=59549,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407352.1;locus_tag=LDO49_RS37875;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAV010000046.1 RefSeq gene 59560 59982 . + . ID=gene-LDO49_RS08620;Name=LDO49_RS08620;end_range=59982,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08620;partial=true;start_range=.,59560 NZ_CAJZAV010000046.1 Protein Homology CDS 59560 59982 . + 0 ID=cds-WP_443797927.1;Parent=gene-LDO49_RS08620;Dbxref=GenBank:WP_443797927.1;Name=WP_443797927.1;end_range=59982,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337509.1;locus_tag=LDO49_RS08620;partial=true;product=phage integrase family protein;protein_id=WP_443797927.1;start_range=.,59560;transl_table=11 ##sequence-region NZ_CAJZAV010000047.1 1 32297 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000047.1 RefSeq region 1 32297 . + . ID=NZ_CAJZAV010000047.1:1..32297;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_140 NZ_CAJZAV010000047.1 RefSeq gene 198 590 . - . ID=gene-LDO49_RS08625;Name=LDO49_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08625;old_locus_tag=BCEP4_1400001 NZ_CAJZAV010000047.1 Protein Homology CDS 198 590 . - 0 ID=cds-WP_224051657.1;Parent=gene-LDO49_RS08625;Dbxref=GenBank:WP_224051657.1;Name=WP_224051657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332850.1;locus_tag=LDO49_RS08625;product=VOC family protein;protein_id=WP_224051657.1;transl_table=11 NZ_CAJZAV010000047.1 RefSeq gene 696 4004 . - . ID=gene-LDO49_RS08630;Name=LDO49_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08630;old_locus_tag=BCEP4_1400002 NZ_CAJZAV010000047.1 Protein Homology CDS 696 4004 . - 0 ID=cds-WP_048024411.1;Parent=gene-LDO49_RS08630;Dbxref=GenBank:WP_048024411.1;Name=WP_048024411.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897587.1;locus_tag=LDO49_RS08630;product=efflux RND transporter permease subunit;protein_id=WP_048024411.1;transl_table=11 NZ_CAJZAV010000047.1 RefSeq gene 4109 7222 . - . ID=gene-LDO49_RS08635;Name=LDO49_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08635;old_locus_tag=BCEP4_1400003 NZ_CAJZAV010000047.1 Protein Homology CDS 4109 7222 . - 0 ID=cds-WP_059498068.1;Parent=gene-LDO49_RS08635;Dbxref=GenBank:WP_059498068.1;Name=WP_059498068.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401193.1;locus_tag=LDO49_RS08635;product=MdtB/MuxB family multidrug efflux RND transporter permease subunit;protein_id=WP_059498068.1;transl_table=11 NZ_CAJZAV010000047.1 RefSeq gene 7238 8605 . - . ID=gene-LDO49_RS08640;Name=LDO49_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08640;old_locus_tag=BCEP4_1400004 NZ_CAJZAV010000047.1 Protein Homology CDS 7238 8605 . - 0 ID=cds-WP_224051658.1;Parent=gene-LDO49_RS08640;Dbxref=GenBank:WP_224051658.1;Name=WP_224051658.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694235.1;locus_tag=LDO49_RS08640;product=MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit;protein_id=WP_224051658.1;transl_table=11 NZ_CAJZAV010000047.1 RefSeq gene 8859 9683 . - . ID=gene-LDO49_RS08645;Name=LDO49_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08645;old_locus_tag=BCEP4_1400005 NZ_CAJZAV010000047.1 Protein Homology CDS 8859 9683 . - 0 ID=cds-WP_057056455.1;Parent=gene-LDO49_RS08645;Dbxref=GenBank:WP_057056455.1;Name=WP_057056455.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545003.1;locus_tag=LDO49_RS08645;product=IclR family transcriptional regulator;protein_id=WP_057056455.1;transl_table=11 NZ_CAJZAV010000047.1 RefSeq gene 10030 10218 . + . ID=gene-LDO49_RS08650;Name=LDO49_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08650;old_locus_tag=BCEP4_1400006 NZ_CAJZAV010000047.1 GeneMarkS-2+ CDS 10030 10218 . + 0 ID=cds-WP_059620743.1;Parent=gene-LDO49_RS08650;Dbxref=GenBank:WP_059620743.1;Name=WP_059620743.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS08650;product=hypothetical protein;protein_id=WP_059620743.1;transl_table=11 NZ_CAJZAV010000047.1 RefSeq gene 10318 12282 . - . ID=gene-LDO49_RS08655;Name=LDO49_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08655;old_locus_tag=BCEP4_1400008 NZ_CAJZAV010000047.1 Protein Homology CDS 10318 12282 . - 0 ID=cds-WP_224051659.1;Parent=gene-LDO49_RS08655;Dbxref=GenBank:WP_224051659.1;Name=WP_224051659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199580.1;locus_tag=LDO49_RS08655;product=PhoX family protein;protein_id=WP_224051659.1;transl_table=11 NZ_CAJZAV010000047.1 RefSeq gene 12442 13635 . - . ID=gene-LDO49_RS08660;Name=LDO49_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08660;old_locus_tag=BCEP4_1400009 NZ_CAJZAV010000047.1 Protein Homology CDS 12442 13635 . - 0 ID=cds-WP_048024422.1;Parent=gene-LDO49_RS08660;Dbxref=GenBank:WP_048024422.1;Name=WP_048024422.1;Ontology_term=GO:0072488,GO:0008519,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694238.1;locus_tag=LDO49_RS08660;product=ammonium transporter;protein_id=WP_048024422.1;transl_table=11 NZ_CAJZAV010000047.1 RefSeq gene 13899 14234 . - . ID=gene-LDO49_RS08665;Name=LDO49_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08665;old_locus_tag=BCEP4_1400010 NZ_CAJZAV010000047.1 Protein Homology CDS 13899 14234 . - 0 ID=cds-WP_048024424.1;Parent=gene-LDO49_RS08665;Dbxref=GenBank:WP_048024424.1;Name=WP_048024424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545006.1;locus_tag=LDO49_RS08665;product=hypothetical protein;protein_id=WP_048024424.1;transl_table=11 NZ_CAJZAV010000047.1 RefSeq gene 14429 14857 . + . ID=gene-LDO49_RS08670;Name=LDO49_RS08670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08670;old_locus_tag=BCEP4_1400011 NZ_CAJZAV010000047.1 Protein Homology CDS 14429 14857 . + 0 ID=cds-WP_021159399.1;Parent=gene-LDO49_RS08670;Dbxref=GenBank:WP_021159399.1;Name=WP_021159399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897553.1;locus_tag=LDO49_RS08670;product=hypothetical protein;protein_id=WP_021159399.1;transl_table=11 NZ_CAJZAV010000047.1 RefSeq gene 14948 15403 . + . ID=gene-LDO49_RS08675;Name=LDO49_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08675;old_locus_tag=BCEP4_1400012 NZ_CAJZAV010000047.1 Protein Homology CDS 14948 15403 . + 0 ID=cds-WP_059815781.1;Parent=gene-LDO49_RS08675;Dbxref=GenBank:WP_059815781.1;Name=WP_059815781.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351480.1;locus_tag=LDO49_RS08675;product=Rrf2 family transcriptional regulator;protein_id=WP_059815781.1;transl_table=11 NZ_CAJZAV010000047.1 RefSeq gene 15532 16173 . + . ID=gene-LDO49_RS08680;Name=LDO49_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08680;old_locus_tag=BCEP4_1400013 NZ_CAJZAV010000047.1 Protein Homology CDS 15532 16173 . + 0 ID=cds-WP_021159401.1;Parent=gene-LDO49_RS08680;Dbxref=GenBank:WP_021159401.1;Name=WP_021159401.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601647.1;locus_tag=LDO49_RS08680;product=NAD(P)-dependent oxidoreductase;protein_id=WP_021159401.1;transl_table=11 NZ_CAJZAV010000047.1 RefSeq gene 16418 16888 . + . ID=gene-LDO49_RS08685;Name=LDO49_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08685;old_locus_tag=BCEP4_1400014 NZ_CAJZAV010000047.1 Protein Homology CDS 16418 16888 . + 0 ID=cds-WP_006484401.1;Parent=gene-LDO49_RS08685;Dbxref=GenBank:WP_006484401.1;Name=WP_006484401.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332862.1;locus_tag=LDO49_RS08685;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_006484401.1;transl_table=11 NZ_CAJZAV010000047.1 RefSeq gene 16931 17704 . - . ID=gene-LDO49_RS08690;Name=LDO49_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08690;old_locus_tag=BCEP4_1400015 NZ_CAJZAV010000047.1 Protein Homology CDS 16931 17704 . - 0 ID=cds-WP_021159403.1;Parent=gene-LDO49_RS08690;Dbxref=GenBank:WP_021159403.1;Name=WP_021159403.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410734.1;locus_tag=LDO49_RS08690;product=ABC transporter ATP-binding protein;protein_id=WP_021159403.1;transl_table=11 NZ_CAJZAV010000047.1 RefSeq gene 17709 19397 . - . ID=gene-LDO49_RS08695;Name=LDO49_RS08695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08695;old_locus_tag=BCEP4_1400016 NZ_CAJZAV010000047.1 Protein Homology CDS 17709 19397 . - 0 ID=cds-WP_059498060.1;Parent=gene-LDO49_RS08695;Dbxref=GenBank:WP_059498060.1;Name=WP_059498060.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851358.1;locus_tag=LDO49_RS08695;product=ABC transporter permease;protein_id=WP_059498060.1;transl_table=11 NZ_CAJZAV010000047.1 RefSeq gene 19387 20430 . - . ID=gene-LDO49_RS08700;Name=LDO49_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08700;old_locus_tag=BCEP4_1400017 NZ_CAJZAV010000047.1 Protein Homology CDS 19387 20430 . - 0 ID=cds-WP_224051660.1;Parent=gene-LDO49_RS08700;Dbxref=GenBank:WP_224051660.1;Name=WP_224051660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764706.1;locus_tag=LDO49_RS08700;product=Fe(3+) ABC transporter substrate-binding protein;protein_id=WP_224051660.1;transl_table=11 NZ_CAJZAV010000047.1 RefSeq gene 20673 20834 . + . ID=gene-LDO49_RS08705;Name=LDO49_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08705;old_locus_tag=BCEP4_1400018 NZ_CAJZAV010000047.1 Protein Homology CDS 20673 20834 . + 0 ID=cds-WP_006476417.1;Parent=gene-LDO49_RS08705;Dbxref=GenBank:WP_006476417.1;Name=WP_006476417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415664.1;locus_tag=LDO49_RS08705;product=hypothetical protein;protein_id=WP_006476417.1;transl_table=11 NZ_CAJZAV010000047.1 RefSeq gene 20983 22350 . - . ID=gene-LDO49_RS08710;Name=LDO49_RS08710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08710;old_locus_tag=BCEP4_1400019 NZ_CAJZAV010000047.1 Protein Homology CDS 20983 22350 . - 0 ID=cds-WP_048024431.1;Parent=gene-LDO49_RS08710;Dbxref=GenBank:WP_048024431.1;Name=WP_048024431.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538452.1;locus_tag=LDO49_RS08710;product=amino acid permease;protein_id=WP_048024431.1;transl_table=11 NZ_CAJZAV010000047.1 RefSeq gene 22642 24933 . - . ID=gene-LDO49_RS08715;Name=LDO49_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08715;old_locus_tag=BCEP4_1400020 NZ_CAJZAV010000047.1 Protein Homology CDS 22642 24933 . - 0 ID=cds-WP_048024433.1;Parent=gene-LDO49_RS08715;Dbxref=GenBank:WP_048024433.1;Name=WP_048024433.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754388.1;locus_tag=LDO49_RS08715;product=FUSC family protein;protein_id=WP_048024433.1;transl_table=11 NZ_CAJZAV010000047.1 RefSeq gene 25115 28459 . + . ID=gene-LDO49_RS08720;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=LDO49_RS08720;old_locus_tag=BCEP4_1400021 NZ_CAJZAV010000047.1 Protein Homology CDS 25115 28459 . + 0 ID=cds-WP_219706210.1;Parent=gene-LDO49_RS08720;Dbxref=GenBank:WP_219706210.1;Name=WP_219706210.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011204976.1;locus_tag=LDO49_RS08720;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_219706210.1;transl_table=11 NZ_CAJZAV010000047.1 RefSeq gene 28456 32166 . + . ID=gene-LDO49_RS08725;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=LDO49_RS08725;old_locus_tag=BCEP4_1400022 NZ_CAJZAV010000047.1 Protein Homology CDS 28456 32166 . + 0 ID=cds-WP_224051662.1;Parent=gene-LDO49_RS08725;Dbxref=GenBank:WP_224051662.1;Name=WP_224051662.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524,GO:0008854,GO:0009338;gbkey=CDS;gene=recB;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476411.1;locus_tag=LDO49_RS08725;product=exodeoxyribonuclease V subunit beta;protein_id=WP_224051662.1;transl_table=11 ##sequence-region NZ_CAJZAV010000048.1 1 18642 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000048.1 RefSeq region 1 18642 . + . ID=NZ_CAJZAV010000048.1:1..18642;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_141 NZ_CAJZAV010000048.1 RefSeq gene 1 468 . - . ID=gene-LDO49_RS08730;Name=LDO49_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08730;partial=true;start_range=.,1 NZ_CAJZAV010000048.1 Protein Homology CDS 1 468 . - 0 ID=cds-WP_224051665.1;Parent=gene-LDO49_RS08730;Dbxref=GenBank:WP_224051665.1;Name=WP_224051665.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493661.1;locus_tag=LDO49_RS08730;partial=true;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_224051665.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000048.1 RefSeq gene 716 1858 . - . ID=gene-LDO49_RS08735;Name=LDO49_RS08735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08735;old_locus_tag=BCEP4_1410003 NZ_CAJZAV010000048.1 Protein Homology CDS 716 1858 . - 0 ID=cds-WP_060147655.1;Parent=gene-LDO49_RS08735;Dbxref=GenBank:WP_060147655.1;Name=WP_060147655.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350402.1;locus_tag=LDO49_RS08735;product=sigma-54 interaction domain-containing protein;protein_id=WP_060147655.1;transl_table=11 NZ_CAJZAV010000048.1 RefSeq gene 1813 3045 . - . ID=gene-LDO49_RS08740;Name=LDO49_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08740;old_locus_tag=BCEP4_1410004 NZ_CAJZAV010000048.1 Protein Homology CDS 1813 3045 . - 0 ID=cds-WP_060147664.1;Parent=gene-LDO49_RS08740;Dbxref=GenBank:WP_060147664.1;Name=WP_060147664.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350401.1;locus_tag=LDO49_RS08740;product=acyl-CoA dehydrogenase family protein;protein_id=WP_060147664.1;transl_table=11 NZ_CAJZAV010000048.1 RefSeq gene 3515 4075 . + . ID=gene-LDO49_RS08745;Name=msuE;gbkey=Gene;gene=msuE;gene_biotype=protein_coding;locus_tag=LDO49_RS08745;old_locus_tag=BCEP4_1410005 NZ_CAJZAV010000048.1 Protein Homology CDS 3515 4075 . + 0 ID=cds-WP_060147665.1;Parent=gene-LDO49_RS08745;Dbxref=GenBank:WP_060147665.1;Name=WP_060147665.1;Ontology_term=GO:0016491;gbkey=CDS;gene=msuE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660916.1;locus_tag=LDO49_RS08745;product=FMN reductase;protein_id=WP_060147665.1;transl_table=11 NZ_CAJZAV010000048.1 RefSeq gene 4112 5215 . + . ID=gene-LDO49_RS08750;Name=sfnG;gbkey=Gene;gene=sfnG;gene_biotype=protein_coding;locus_tag=LDO49_RS08750;old_locus_tag=BCEP4_1410006 NZ_CAJZAV010000048.1 Protein Homology CDS 4112 5215 . + 0 ID=cds-WP_048028831.1;Parent=gene-LDO49_RS08750;Dbxref=GenBank:WP_048028831.1;Name=WP_048028831.1;Ontology_term=GO:0006790,GO:0004497,GO:0010181;gbkey=CDS;gene=sfnG;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399272.1;locus_tag=LDO49_RS08750;product=dimethylsulfone monooxygenase SfnG;protein_id=WP_048028831.1;transl_table=11 NZ_CAJZAV010000048.1 RefSeq gene 5390 6619 . + . ID=gene-LDO49_RS08755;Name=LDO49_RS08755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08755;old_locus_tag=BCEP4_1410007 NZ_CAJZAV010000048.1 Protein Homology CDS 5390 6619 . + 0 ID=cds-WP_042975765.1;Parent=gene-LDO49_RS08755;Dbxref=GenBank:WP_042975765.1;Name=WP_042975765.1;Ontology_term=GO:0006790,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009900818.1;locus_tag=LDO49_RS08755;product=SfnB family sulfur acquisition oxidoreductase;protein_id=WP_042975765.1;transl_table=11 NZ_CAJZAV010000048.1 RefSeq gene 6717 8165 . + . ID=gene-LDO49_RS08760;Name=LDO49_RS08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08760;old_locus_tag=BCEP4_1410008 NZ_CAJZAV010000048.1 Protein Homology CDS 6717 8165 . + 0 ID=cds-WP_060147656.1;Parent=gene-LDO49_RS08760;Dbxref=GenBank:WP_060147656.1;Name=WP_060147656.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF024910.6;locus_tag=LDO49_RS08760;product=APC family permease;protein_id=WP_060147656.1;transl_table=11 NZ_CAJZAV010000048.1 RefSeq gene 8271 8918 . - . ID=gene-LDO49_RS08765;Name=LDO49_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08765;old_locus_tag=BCEP4_1410009 NZ_CAJZAV010000048.1 Protein Homology CDS 8271 8918 . - 0 ID=cds-WP_059620444.1;Parent=gene-LDO49_RS08765;Dbxref=GenBank:WP_059620444.1;Name=WP_059620444.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490923.1;locus_tag=LDO49_RS08765;product=LysE family translocator;protein_id=WP_059620444.1;transl_table=11 NZ_CAJZAV010000048.1 RefSeq gene 9029 9880 . + . ID=gene-LDO49_RS08770;Name=LDO49_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08770;old_locus_tag=BCEP4_1410010 NZ_CAJZAV010000048.1 Protein Homology CDS 9029 9880 . + 0 ID=cds-WP_021160722.1;Parent=gene-LDO49_RS08770;Dbxref=GenBank:WP_021160722.1;Name=WP_021160722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490930.1;locus_tag=LDO49_RS08770;product=LysR substrate-binding domain-containing protein;protein_id=WP_021160722.1;transl_table=11 NZ_CAJZAV010000048.1 RefSeq gene 9909 10799 . - . ID=gene-LDO49_RS08775;Name=LDO49_RS08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08775;old_locus_tag=BCEP4_1410011 NZ_CAJZAV010000048.1 Protein Homology CDS 9909 10799 . - 0 ID=cds-WP_060147657.1;Parent=gene-LDO49_RS08775;Dbxref=GenBank:WP_060147657.1;Name=WP_060147657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372166.1;locus_tag=LDO49_RS08775;product=LysR substrate-binding domain-containing protein;protein_id=WP_060147657.1;transl_table=11 NZ_CAJZAV010000048.1 RefSeq gene 10953 14012 . + . ID=gene-LDO49_RS08780;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=LDO49_RS08780;old_locus_tag=BCEP4_1410012 NZ_CAJZAV010000048.1 Protein Homology CDS 10953 14012 . + 0 ID=cds-WP_060147658.1;Parent=gene-LDO49_RS08780;Dbxref=GenBank:WP_060147658.1;Name=WP_060147658.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490961.1;locus_tag=LDO49_RS08780;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_060147658.1;transl_table=11 NZ_CAJZAV010000048.1 RefSeq gene 14110 14412 . - . ID=gene-LDO49_RS08785;Name=LDO49_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08785;old_locus_tag=BCEP4_1410013 NZ_CAJZAV010000048.1 Protein Homology CDS 14110 14412 . - 0 ID=cds-WP_021160718.1;Parent=gene-LDO49_RS08785;Dbxref=GenBank:WP_021160718.1;Name=WP_021160718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549323.1;locus_tag=LDO49_RS08785;product=hypothetical protein;protein_id=WP_021160718.1;transl_table=11 NZ_CAJZAV010000048.1 RefSeq gene 14500 15654 . - . ID=gene-LDO49_RS08790;Name=LDO49_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08790;old_locus_tag=BCEP4_1410014 NZ_CAJZAV010000048.1 Protein Homology CDS 14500 15654 . - 0 ID=cds-WP_021160717.1;Parent=gene-LDO49_RS08790;Dbxref=GenBank:WP_021160717.1;Name=WP_021160717.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726283.1;locus_tag=LDO49_RS08790;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_021160717.1;transl_table=11 NZ_CAJZAV010000048.1 RefSeq gene 16292 17191 . - . ID=gene-LDO49_RS08795;Name=LDO49_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08795;old_locus_tag=BCEP4_1410015 NZ_CAJZAV010000048.1 Protein Homology CDS 16292 17191 . - 0 ID=cds-WP_021160716.1;Parent=gene-LDO49_RS08795;Dbxref=GenBank:WP_021160716.1;Name=WP_021160716.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549321.1;locus_tag=LDO49_RS08795;product=DMT family transporter;protein_id=WP_021160716.1;transl_table=11 NZ_CAJZAV010000048.1 RefSeq gene 17249 18232 . + . ID=gene-LDO49_RS08800;Name=LDO49_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08800;old_locus_tag=BCEP4_1410016 NZ_CAJZAV010000048.1 Protein Homology CDS 17249 18232 . + 0 ID=cds-WP_060147659.1;Parent=gene-LDO49_RS08800;Dbxref=GenBank:WP_060147659.1;Name=WP_060147659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350376.1;locus_tag=LDO49_RS08800;product=LysR substrate-binding domain-containing protein;protein_id=WP_060147659.1;transl_table=11 NZ_CAJZAV010000048.1 RefSeq pseudogene 18421 18642 . + . ID=gene-LDO49_RS08805;Name=LDO49_RS08805;end_range=18642,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS08805;partial=true;pseudo=true NZ_CAJZAV010000048.1 Protein Homology CDS 18421 18642 . + 0 ID=cds-LDO49_RS08805;Parent=gene-LDO49_RS08805;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=18642,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497884.1;locus_tag=LDO49_RS08805;partial=true;product=nitroreductase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000049.1 1 25055 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000049.1 RefSeq region 1 25055 . + . ID=NZ_CAJZAV010000049.1:1..25055;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_142 NZ_CAJZAV010000049.1 RefSeq gene 1 2067 . - . ID=gene-LDO49_RS08810;Name=LDO49_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08810;partial=true;start_range=.,1 NZ_CAJZAV010000049.1 Protein Homology CDS 1 2067 . - 0 ID=cds-WP_224051667.1;Parent=gene-LDO49_RS08810;Dbxref=GenBank:WP_224051667.1;Name=WP_224051667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493819.1;locus_tag=LDO49_RS08810;partial=true;product=YhaN family protein;protein_id=WP_224051667.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000049.1 RefSeq gene 2071 3321 . - . ID=gene-LDO49_RS08815;Name=LDO49_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08815;old_locus_tag=BCEP4_1420002 NZ_CAJZAV010000049.1 Protein Homology CDS 2071 3321 . - 0 ID=cds-WP_048028198.1;Parent=gene-LDO49_RS08815;Dbxref=GenBank:WP_048028198.1;Name=WP_048028198.1;Ontology_term=GO:0003677,GO:0042578,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405536.1;locus_tag=LDO49_RS08815;product=metallophosphoesterase family protein;protein_id=WP_048028198.1;transl_table=11 NZ_CAJZAV010000049.1 RefSeq gene 3386 3928 . - . ID=gene-LDO49_RS08820;Name=LDO49_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08820;old_locus_tag=BCEP4_1420004 NZ_CAJZAV010000049.1 Protein Homology CDS 3386 3928 . - 0 ID=cds-WP_060125947.1;Parent=gene-LDO49_RS08820;Dbxref=GenBank:WP_060125947.1;Name=WP_060125947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349325.1;locus_tag=LDO49_RS08820;product=CbrC family protein;protein_id=WP_060125947.1;transl_table=11 NZ_CAJZAV010000049.1 RefSeq gene 4007 4597 . - . ID=gene-LDO49_RS08825;Name=LDO49_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08825;old_locus_tag=BCEP4_1420005 NZ_CAJZAV010000049.1 GeneMarkS-2+ CDS 4007 4597 . - 0 ID=cds-WP_059552695.1;Parent=gene-LDO49_RS08825;Dbxref=GenBank:WP_059552695.1;Name=WP_059552695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS08825;product=hypothetical protein;protein_id=WP_059552695.1;transl_table=11 NZ_CAJZAV010000049.1 RefSeq gene 4743 5513 . - . ID=gene-LDO49_RS08830;Name=LDO49_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08830;old_locus_tag=BCEP4_1420006 NZ_CAJZAV010000049.1 Protein Homology CDS 4743 5513 . - 0 ID=cds-WP_224051668.1;Parent=gene-LDO49_RS08830;Dbxref=GenBank:WP_224051668.1;Name=WP_224051668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487941.1;locus_tag=LDO49_RS08830;product=hypothetical protein;protein_id=WP_224051668.1;transl_table=11 NZ_CAJZAV010000049.1 RefSeq gene 5888 6430 . - . ID=gene-LDO49_RS08835;Name=LDO49_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08835;old_locus_tag=BCEP4_1420007 NZ_CAJZAV010000049.1 Protein Homology CDS 5888 6430 . - 0 ID=cds-WP_060147426.1;Parent=gene-LDO49_RS08835;Dbxref=GenBank:WP_060147426.1;Name=WP_060147426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549383.1;locus_tag=LDO49_RS08835;product=hypothetical protein;protein_id=WP_060147426.1;transl_table=11 NZ_CAJZAV010000049.1 RefSeq gene 6759 7127 . - . ID=gene-LDO49_RS08840;Name=LDO49_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08840;old_locus_tag=BCEP4_1420008 NZ_CAJZAV010000049.1 Protein Homology CDS 6759 7127 . - 0 ID=cds-WP_224051669.1;Parent=gene-LDO49_RS08840;Dbxref=GenBank:WP_224051669.1;Name=WP_224051669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349318.1;locus_tag=LDO49_RS08840;product=hypothetical protein;protein_id=WP_224051669.1;transl_table=11 NZ_CAJZAV010000049.1 RefSeq gene 7207 9195 . - . ID=gene-LDO49_RS08845;Name=LDO49_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08845;old_locus_tag=BCEP4_1420009 NZ_CAJZAV010000049.1 Protein Homology CDS 7207 9195 . - 0 ID=cds-WP_060147427.1;Parent=gene-LDO49_RS08845;Dbxref=GenBank:WP_060147427.1;Name=WP_060147427.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337180.1;locus_tag=LDO49_RS08845;product=gamma-glutamyltransferase family protein;protein_id=WP_060147427.1;transl_table=11 NZ_CAJZAV010000049.1 RefSeq gene 9420 10376 . - . ID=gene-LDO49_RS08850;Name=LDO49_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08850;old_locus_tag=BCEP4_1420010 NZ_CAJZAV010000049.1 Protein Homology CDS 9420 10376 . - 0 ID=cds-WP_059487792.1;Parent=gene-LDO49_RS08850;Dbxref=GenBank:WP_059487792.1;Name=WP_059487792.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483694.1;locus_tag=LDO49_RS08850;product=LysR family transcriptional regulator;protein_id=WP_059487792.1;transl_table=11 NZ_CAJZAV010000049.1 RefSeq gene 10479 11603 . + . ID=gene-LDO49_RS08855;Name=LDO49_RS08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08855;old_locus_tag=BCEP4_1420012 NZ_CAJZAV010000049.1 Protein Homology CDS 10479 11603 . + 0 ID=cds-WP_060147428.1;Parent=gene-LDO49_RS08855;Dbxref=GenBank:WP_060147428.1;Name=WP_060147428.1;Ontology_term=GO:0004062;gbkey=CDS;go_function=aryl sulfotransferase activity|0004062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480976.1;locus_tag=LDO49_RS08855;product=aryl-sulfate sulfotransferase;protein_id=WP_060147428.1;transl_table=11 NZ_CAJZAV010000049.1 RefSeq gene 11663 13024 . + . ID=gene-LDO49_RS08860;Name=LDO49_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08860;old_locus_tag=BCEP4_1420013 NZ_CAJZAV010000049.1 Protein Homology CDS 11663 13024 . + 0 ID=cds-WP_060147432.1;Parent=gene-LDO49_RS08860;Dbxref=GenBank:WP_060147432.1;Name=WP_060147432.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694978.1;locus_tag=LDO49_RS08860;product=uracil-xanthine permease family protein;protein_id=WP_060147432.1;transl_table=11 NZ_CAJZAV010000049.1 RefSeq gene 13360 14298 . + . ID=gene-LDO49_RS08865;Name=LDO49_RS08865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08865;old_locus_tag=BCEP4_1420014 NZ_CAJZAV010000049.1 Protein Homology CDS 13360 14298 . + 0 ID=cds-WP_124476003.1;Parent=gene-LDO49_RS08865;Dbxref=GenBank:WP_124476003.1;Name=WP_124476003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217786.1;locus_tag=LDO49_RS08865;product=tyrosine-type recombinase/integrase;protein_id=WP_124476003.1;transl_table=11 NZ_CAJZAV010000049.1 RefSeq gene 14336 14815 . - . ID=gene-LDO49_RS08870;Name=LDO49_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08870;old_locus_tag=BCEP4_1420015 NZ_CAJZAV010000049.1 Protein Homology CDS 14336 14815 . - 0 ID=cds-WP_027792217.1;Parent=gene-LDO49_RS08870;Dbxref=GenBank:WP_027792217.1;Name=WP_027792217.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549376.1;locus_tag=LDO49_RS08870;product=RES family NAD+ phosphorylase;protein_id=WP_027792217.1;transl_table=11 NZ_CAJZAV010000049.1 RefSeq gene 14812 15267 . - . ID=gene-LDO49_RS08875;Name=parS;gbkey=Gene;gene=parS;gene_biotype=protein_coding;locus_tag=LDO49_RS08875;old_locus_tag=BCEP4_1420016 NZ_CAJZAV010000049.1 Protein Homology CDS 14812 15267 . - 0 ID=cds-WP_006480981.1;Parent=gene-LDO49_RS08875;Dbxref=GenBank:WP_006480981.1;Name=WP_006480981.1;Ontology_term=GO:0110001;gbkey=CDS;gene=parS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767020.1;locus_tag=LDO49_RS08875;product=type II RES/Xre toxin-antitoxin system antitoxin;protein_id=WP_006480981.1;transl_table=11 NZ_CAJZAV010000049.1 RefSeq pseudogene 15670 15836 . - . ID=gene-LDO49_RS08880;Name=LDO49_RS08880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS08880;old_locus_tag=BCEP4_1420018;partial=true;pseudo=true;start_range=.,15670 NZ_CAJZAV010000049.1 Protein Homology CDS 15670 15836 . - 0 ID=cds-LDO49_RS08880;Parent=gene-LDO49_RS08880;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007181605.1;locus_tag=LDO49_RS08880;partial=true;product=DUF1289 domain-containing protein;pseudo=true;start_range=.,15670;transl_table=11 NZ_CAJZAV010000049.1 RefSeq gene 16253 16384 . - . ID=gene-LDO49_RS37275;Name=LDO49_RS37275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37275;old_locus_tag=BCEP4_1420020 NZ_CAJZAV010000049.1 GeneMarkS-2+ CDS 16253 16384 . - 0 ID=cds-WP_260429957.1;Parent=gene-LDO49_RS37275;Dbxref=GenBank:WP_260429957.1;Name=WP_260429957.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37275;product=hypothetical protein;protein_id=WP_260429957.1;transl_table=11 NZ_CAJZAV010000049.1 RefSeq gene 16477 17118 . - . ID=gene-LDO49_RS08885;Name=LDO49_RS08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08885;old_locus_tag=BCEP4_1420021 NZ_CAJZAV010000049.1 Protein Homology CDS 16477 17118 . - 0 ID=cds-WP_060147430.1;Parent=gene-LDO49_RS08885;Dbxref=GenBank:WP_060147430.1;Name=WP_060147430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411387.1;locus_tag=LDO49_RS08885;product=HD domain-containing protein;protein_id=WP_060147430.1;transl_table=11 NZ_CAJZAV010000049.1 RefSeq gene 17333 18298 . + . ID=gene-LDO49_RS08890;Name=LDO49_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08890;old_locus_tag=BCEP4_1420022 NZ_CAJZAV010000049.1 Protein Homology CDS 17333 18298 . + 0 ID=cds-WP_048028157.1;Parent=gene-LDO49_RS08890;Dbxref=GenBank:WP_048028157.1;Name=WP_048028157.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372114.1;locus_tag=LDO49_RS08890;product=GlxA family transcriptional regulator;protein_id=WP_048028157.1;transl_table=11 NZ_CAJZAV010000049.1 RefSeq gene 18618 18929 . + . ID=gene-LDO49_RS08895;Name=LDO49_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08895;old_locus_tag=BCEP4_1420023 NZ_CAJZAV010000049.1 Protein Homology CDS 18618 18929 . + 0 ID=cds-WP_011349305.1;Parent=gene-LDO49_RS08895;Dbxref=GenBank:WP_011349305.1;Name=WP_011349305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337171.1;locus_tag=LDO49_RS08895;product=DUF4148 domain-containing protein;protein_id=WP_011349305.1;transl_table=11 NZ_CAJZAV010000049.1 RefSeq gene 19245 19958 . + . ID=gene-LDO49_RS08900;Name=LDO49_RS08900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08900;old_locus_tag=BCEP4_1420024 NZ_CAJZAV010000049.1 Protein Homology CDS 19245 19958 . + 0 ID=cds-WP_060147431.1;Parent=gene-LDO49_RS08900;Dbxref=GenBank:WP_060147431.1;Name=WP_060147431.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549371.1;locus_tag=LDO49_RS08900;product=dienelactone hydrolase family protein;protein_id=WP_060147431.1;transl_table=11 NZ_CAJZAV010000049.1 RefSeq gene 20092 20501 . - . ID=gene-LDO49_RS08905;Name=LDO49_RS08905;end_range=20501,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08905;old_locus_tag=BCEP4_1420025;partial=true NZ_CAJZAV010000049.1 Protein Homology CDS 20092 20501 . - 2 ID=cds-WP_224051672.1;Parent=gene-LDO49_RS08905;Dbxref=GenBank:WP_224051672.1;Name=WP_224051672.1;Ontology_term=GO:0055085,GO:0015562;end_range=20501,.;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212800.1;locus_tag=LDO49_RS08905;partial=true;product=TolC family protein;protein_id=WP_224051672.1;transl_table=11 NZ_CAJZAV010000049.1 RefSeq pseudogene 20650 21686 . - . ID=gene-LDO49_RS08910;Name=LDO49_RS08910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS08910;old_locus_tag=BCEP4_1420027;partial=true;pseudo=true;start_range=.,20650 NZ_CAJZAV010000049.1 Protein Homology CDS 20650 21686 . - 0 ID=cds-LDO49_RS08910;Parent=gene-LDO49_RS08910;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212800.1;locus_tag=LDO49_RS08910;partial=true;product=TolC family protein;pseudo=true;start_range=.,20650;transl_table=11 NZ_CAJZAV010000049.1 RefSeq gene 21686 24886 . - . ID=gene-LDO49_RS08915;Name=bpeB;gbkey=Gene;gene=bpeB;gene_biotype=protein_coding;locus_tag=LDO49_RS08915;old_locus_tag=BCEP4_1420028 NZ_CAJZAV010000049.1 Protein Homology CDS 21686 24886 . - 0 ID=cds-WP_059490398.1;Parent=gene-LDO49_RS08915;Dbxref=GenBank:WP_059490398.1;Name=WP_059490398.1;gbkey=CDS;gene=bpeB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398428.1;locus_tag=LDO49_RS08915;product=efflux RND transporter permease BpeB;protein_id=WP_059490398.1;transl_table=11 ##sequence-region NZ_CAJZAV010000050.1 1 18555 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000050.1 RefSeq region 1 18555 . + . ID=NZ_CAJZAV010000050.1:1..18555;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_143 NZ_CAJZAV010000050.1 RefSeq gene 1 469 . - . ID=gene-LDO49_RS37880;Name=LDO49_RS37880;end_range=469,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37880;partial=true;start_range=.,1 NZ_CAJZAV010000050.1 Protein Homology CDS 1 469 . - 2 ID=cds-WP_443797929.1;Parent=gene-LDO49_RS37880;Dbxref=GenBank:WP_443797929.1;Name=WP_443797929.1;Ontology_term=GO:0055085,GO:0015562;end_range=469,.;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212800.1;locus_tag=LDO49_RS37880;partial=true;product=TolC family protein;protein_id=WP_443797929.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000050.1 RefSeq gene 480 1068 . - . ID=gene-LDO49_RS37885;Name=LDO49_RS37885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37885;old_locus_tag=BCEP4_1430002;partial=true;start_range=.,480 NZ_CAJZAV010000050.1 Protein Homology CDS 480 1068 . - 0 ID=cds-WP_443797928.1;Parent=gene-LDO49_RS37885;Dbxref=GenBank:WP_443797928.1;Name=WP_443797928.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876878.1;locus_tag=LDO49_RS37885;partial=true;product=TolC family protein;protein_id=WP_443797928.1;start_range=.,480;transl_table=11 NZ_CAJZAV010000050.1 RefSeq gene 1071 4262 . - . ID=gene-LDO49_RS08925;Name=LDO49_RS08925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08925;old_locus_tag=BCEP4_1430003 NZ_CAJZAV010000050.1 Protein Homology CDS 1071 4262 . - 0 ID=cds-WP_021156318.1;Parent=gene-LDO49_RS08925;Dbxref=GenBank:WP_021156318.1;Name=WP_021156318.1;Ontology_term=GO:0042908,GO:0055085,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398428.1;locus_tag=LDO49_RS08925;product=efflux RND transporter permease subunit;protein_id=WP_021156318.1;transl_table=11 NZ_CAJZAV010000050.1 RefSeq gene 4278 5534 . - . ID=gene-LDO49_RS08930;Name=LDO49_RS08930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08930;old_locus_tag=BCEP4_1430004 NZ_CAJZAV010000050.1 Protein Homology CDS 4278 5534 . - 0 ID=cds-WP_224051673.1;Parent=gene-LDO49_RS08930;Dbxref=GenBank:WP_224051673.1;Name=WP_224051673.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197561.1;locus_tag=LDO49_RS08930;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_224051673.1;transl_table=11 NZ_CAJZAV010000050.1 RefSeq gene 5937 6578 . + . ID=gene-LDO49_RS08935;Name=LDO49_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08935;old_locus_tag=BCEP4_1430005 NZ_CAJZAV010000050.1 Protein Homology CDS 5937 6578 . + 0 ID=cds-WP_224051674.1;Parent=gene-LDO49_RS08935;Dbxref=GenBank:WP_224051674.1;Name=WP_224051674.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896184.1;locus_tag=LDO49_RS08935;product=TetR family transcriptional regulator;protein_id=WP_224051674.1;transl_table=11 NZ_CAJZAV010000050.1 RefSeq gene 6679 7344 . - . ID=gene-LDO49_RS08940;Name=LDO49_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08940;old_locus_tag=BCEP4_1430006 NZ_CAJZAV010000050.1 Protein Homology CDS 6679 7344 . - 0 ID=cds-WP_048025028.1;Parent=gene-LDO49_RS08940;Dbxref=GenBank:WP_048025028.1;Name=WP_048025028.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546095.1;locus_tag=LDO49_RS08940;product=cysteine hydrolase family protein;protein_id=WP_048025028.1;transl_table=11 NZ_CAJZAV010000050.1 RefSeq gene 7497 8510 . + . ID=gene-LDO49_RS08945;Name=LDO49_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08945;old_locus_tag=BCEP4_1430007 NZ_CAJZAV010000050.1 Protein Homology CDS 7497 8510 . + 0 ID=cds-WP_048024985.1;Parent=gene-LDO49_RS08945;Dbxref=GenBank:WP_048024985.1;Name=WP_048024985.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497330.1;locus_tag=LDO49_RS08945;product=helix-turn-helix domain-containing protein;protein_id=WP_048024985.1;transl_table=11 NZ_CAJZAV010000050.1 RefSeq gene 8552 9259 . - . ID=gene-LDO49_RS08950;Name=LDO49_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08950;old_locus_tag=BCEP4_1430008 NZ_CAJZAV010000050.1 Protein Homology CDS 8552 9259 . - 0 ID=cds-WP_059586713.1;Parent=gene-LDO49_RS08950;Dbxref=GenBank:WP_059586713.1;Name=WP_059586713.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554577.1;locus_tag=LDO49_RS08950;product=CoxG family protein;protein_id=WP_059586713.1;transl_table=11 NZ_CAJZAV010000050.1 RefSeq gene 9288 9647 . - . ID=gene-LDO49_RS08955;Name=LDO49_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08955;old_locus_tag=BCEP4_1430009 NZ_CAJZAV010000050.1 Protein Homology CDS 9288 9647 . - 0 ID=cds-WP_021164094.1;Parent=gene-LDO49_RS08955;Dbxref=GenBank:WP_021164094.1;Name=WP_021164094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497332.1;locus_tag=LDO49_RS08955;product=DUF427 domain-containing protein;protein_id=WP_021164094.1;transl_table=11 NZ_CAJZAV010000050.1 RefSeq gene 9780 10217 . - . ID=gene-LDO49_RS08960;Name=LDO49_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08960;old_locus_tag=BCEP4_1430010 NZ_CAJZAV010000050.1 Protein Homology CDS 9780 10217 . - 0 ID=cds-WP_021164093.1;Parent=gene-LDO49_RS08960;Dbxref=GenBank:WP_021164093.1;Name=WP_021164093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490101.1;locus_tag=LDO49_RS08960;product=carboxypeptidase-like regulatory domain-containing protein;protein_id=WP_021164093.1;transl_table=11 NZ_CAJZAV010000050.1 RefSeq gene 10322 11806 . - . ID=gene-LDO49_RS08965;Name=LDO49_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08965;old_locus_tag=BCEP4_1430011 NZ_CAJZAV010000050.1 Protein Homology CDS 10322 11806 . - 0 ID=cds-WP_011353057.1;Parent=gene-LDO49_RS08965;Dbxref=GenBank:WP_011353057.1;Name=WP_011353057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398419.1;locus_tag=LDO49_RS08965;product=DegQ family serine endoprotease;protein_id=WP_011353057.1;transl_table=11 NZ_CAJZAV010000050.1 RefSeq gene 11925 13271 . - . ID=gene-LDO49_RS08970;Name=LDO49_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08970;old_locus_tag=BCEP4_1430012 NZ_CAJZAV010000050.1 Protein Homology CDS 11925 13271 . - 0 ID=cds-WP_021164092.1;Parent=gene-LDO49_RS08970;Dbxref=GenBank:WP_021164092.1;Name=WP_021164092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406484.1;locus_tag=LDO49_RS08970;product=ATP-binding protein;protein_id=WP_021164092.1;transl_table=11 NZ_CAJZAV010000050.1 RefSeq gene 13275 13937 . - . ID=gene-LDO49_RS08975;Name=LDO49_RS08975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08975;old_locus_tag=BCEP4_1430014 NZ_CAJZAV010000050.1 Protein Homology CDS 13275 13937 . - 0 ID=cds-WP_021164091.1;Parent=gene-LDO49_RS08975;Dbxref=GenBank:WP_021164091.1;Name=WP_021164091.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189255.1;locus_tag=LDO49_RS08975;product=response regulator;protein_id=WP_021164091.1;transl_table=11 NZ_CAJZAV010000050.1 RefSeq gene 13904 14125 . - . ID=gene-LDO49_RS08980;Name=LDO49_RS08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08980 NZ_CAJZAV010000050.1 GeneMarkS-2+ CDS 13904 14125 . - 0 ID=cds-WP_162175317.1;Parent=gene-LDO49_RS08980;Dbxref=GenBank:WP_162175317.1;Name=WP_162175317.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS08980;product=hypothetical protein;protein_id=WP_162175317.1;transl_table=11 NZ_CAJZAV010000050.1 RefSeq gene 14124 15656 . + . ID=gene-LDO49_RS08985;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=LDO49_RS08985;old_locus_tag=BCEP4_1430013 NZ_CAJZAV010000050.1 Protein Homology CDS 14124 15656 . + 0 ID=cds-WP_059674721.1;Parent=gene-LDO49_RS08985;Dbxref=GenBank:WP_059674721.1;Name=WP_059674721.1;Ontology_term=GO:0009252,GO:0004175,GO:0009002;gbkey=CDS;gene=dacB;go_function=endopeptidase activity|0004175||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334058.1;locus_tag=LDO49_RS08985;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine endopeptidase;protein_id=WP_059674721.1;transl_table=11 NZ_CAJZAV010000050.1 RefSeq gene 16053 16967 . + . ID=gene-LDO49_RS08990;Name=LDO49_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08990;old_locus_tag=BCEP4_1430016 NZ_CAJZAV010000050.1 Protein Homology CDS 16053 16967 . + 0 ID=cds-WP_224051675.1;Parent=gene-LDO49_RS08990;Dbxref=GenBank:WP_224051675.1;Name=WP_224051675.1;Ontology_term=GO:0006629,GO:0008610,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=lipid metabolic process|0006629||IEA,lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761313.1;locus_tag=LDO49_RS08990;product=sterol desaturase family protein;protein_id=WP_224051675.1;transl_table=11 NZ_CAJZAV010000050.1 RefSeq gene 17063 18208 . + . ID=gene-LDO49_RS08995;Name=LDO49_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS08995;old_locus_tag=BCEP4_1430017 NZ_CAJZAV010000050.1 Protein Homology CDS 17063 18208 . + 0 ID=cds-WP_224051676.1;Parent=gene-LDO49_RS08995;Dbxref=GenBank:WP_224051676.1;Name=WP_224051676.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364608.1;locus_tag=LDO49_RS08995;product=SGNH/GDSL hydrolase family protein;protein_id=WP_224051676.1;transl_table=11 NZ_CAJZAV010000050.1 RefSeq gene 18294 18411 . - . ID=gene-LDO49_RS37890;Name=LDO49_RS37890;end_range=18411,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37890;partial=true NZ_CAJZAV010000050.1 Protein Homology CDS 18294 18411 . - 1 ID=cds-WP_443797930.1;Parent=gene-LDO49_RS37890;Dbxref=GenBank:WP_443797930.1;Name=WP_443797930.1;end_range=18411,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896172.1;locus_tag=LDO49_RS37890;partial=true;product=Sua5 family C-terminal domain-containing protein;protein_id=WP_443797930.1;transl_table=11 NZ_CAJZAV010000050.1 RefSeq pseudogene 18422 18555 . - . ID=gene-LDO49_RS37895;Name=LDO49_RS37895;end_range=18555,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37895;partial=true;pseudo=true;start_range=.,18422 NZ_CAJZAV010000050.1 Protein Homology CDS 18422 18555 . - 1 ID=cds-LDO49_RS37895;Parent=gene-LDO49_RS37895;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=18555,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896172.1;locus_tag=LDO49_RS37895;partial=true;product=L-threonylcarbamoyladenylate synthase;pseudo=true;start_range=.,18422;transl_table=11 ##sequence-region NZ_CAJZAV010000051.1 1 33122 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000051.1 RefSeq region 1 33122 . + . ID=NZ_CAJZAV010000051.1:1..33122;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_144 NZ_CAJZAV010000051.1 RefSeq pseudogene 1 259 . - . ID=gene-LDO49_RS37900;Name=LDO49_RS37900;end_range=259,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37900;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000051.1 Protein Homology CDS 1 259 . - 2 ID=cds-LDO49_RS37900;Parent=gene-LDO49_RS37900;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=259,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004550717.1;locus_tag=LDO49_RS37900;partial=true;product=sensor histidine kinase KdpD;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq pseudogene 270 573 . - . ID=gene-LDO49_RS37905;Name=LDO49_RS37905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37905;old_locus_tag=BCEP4_1440002;partial=true;pseudo=true;start_range=.,270 NZ_CAJZAV010000051.1 Protein Homology CDS 270 573 . - 0 ID=cds-LDO49_RS37905;Parent=gene-LDO49_RS37905;Note=sensory histidine kinase in two-component regulatory system with KdpE%3B signal sensing protein%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004550717.1;locus_tag=LDO49_RS37905;partial=true;product=two-component system sensor histidine kinase KdbD;pseudo=true;start_range=.,270;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 723 1304 . - . ID=gene-LDO49_RS09010;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=LDO49_RS09010;old_locus_tag=BCEP4_1440003 NZ_CAJZAV010000051.1 Protein Homology CDS 723 1304 . - 0 ID=cds-WP_021161108.1;Parent=gene-LDO49_RS09010;Dbxref=GenBank:WP_021161108.1;Name=WP_021161108.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102455.1;locus_tag=LDO49_RS09010;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_021161108.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 1330 3414 . - . ID=gene-LDO49_RS09015;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=LDO49_RS09015;old_locus_tag=BCEP4_1440004 NZ_CAJZAV010000051.1 Protein Homology CDS 1330 3414 . - 0 ID=cds-WP_042976095.1;Parent=gene-LDO49_RS09015;Dbxref=GenBank:WP_042976095.1;Name=WP_042976095.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352735.1;locus_tag=LDO49_RS09015;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_042976095.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 3461 5266 . - . ID=gene-LDO49_RS09020;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=LDO49_RS09020;old_locus_tag=BCEP4_1440005 NZ_CAJZAV010000051.1 Protein Homology CDS 3461 5266 . - 0 ID=cds-WP_060072161.1;Parent=gene-LDO49_RS09020;Dbxref=GenBank:WP_060072161.1;Name=WP_060072161.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352736.1;locus_tag=LDO49_RS09020;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_060072161.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 5263 5355 . - . ID=gene-LDO49_RS09025;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=LDO49_RS09025 NZ_CAJZAV010000051.1 Protein Homology CDS 5263 5355 . - 0 ID=cds-WP_006752209.1;Parent=gene-LDO49_RS09025;Dbxref=GenBank:WP_006752209.1;Name=WP_006752209.1;Ontology_term=GO:0006813,GO:0043462,GO:0031004;gbkey=CDS;gene=kdpF;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_process=potassium ion transport|0006813||IEA,regulation of ATP-dependent activity|0043462||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331558.1;locus_tag=LDO49_RS09025;product=K(+)-transporting ATPase subunit F;protein_id=WP_006752209.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 5679 6653 . - . ID=gene-LDO49_RS09030;Name=LDO49_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09030;old_locus_tag=BCEP4_1440008 NZ_CAJZAV010000051.1 Protein Homology CDS 5679 6653 . - 0 ID=cds-WP_021161103.1;Parent=gene-LDO49_RS09030;Dbxref=GenBank:WP_021161103.1;Name=WP_021161103.1;Ontology_term=GO:0003960,GO:0070402;gbkey=CDS;go_function=quinone reductase (NADPH) activity|0003960||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405597.1;locus_tag=LDO49_RS09030;product=quinone oxidoreductase family protein;protein_id=WP_021161103.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 6982 7608 . - . ID=gene-LDO49_RS09035;Name=LDO49_RS09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09035;old_locus_tag=BCEP4_1440009 NZ_CAJZAV010000051.1 GeneMarkS-2+ CDS 6982 7608 . - 0 ID=cds-WP_124843058.1;Parent=gene-LDO49_RS09035;Dbxref=GenBank:WP_124843058.1;Name=WP_124843058.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS09035;product=hypothetical protein;protein_id=WP_124843058.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 7605 10247 . - . ID=gene-LDO49_RS09040;Name=LDO49_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09040;old_locus_tag=BCEP4_1440010 NZ_CAJZAV010000051.1 GeneMarkS-2+ CDS 7605 10247 . - 0 ID=cds-WP_060072159.1;Parent=gene-LDO49_RS09040;Dbxref=GenBank:WP_060072159.1;Name=WP_060072159.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS09040;product=M23 family metallopeptidase;protein_id=WP_060072159.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 10982 11374 . - . ID=gene-LDO49_RS09045;Name=LDO49_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09045;old_locus_tag=BCEP4_1440012 NZ_CAJZAV010000051.1 Protein Homology CDS 10982 11374 . - 0 ID=cds-WP_042976092.1;Parent=gene-LDO49_RS09045;Dbxref=GenBank:WP_042976092.1;Name=WP_042976092.1;Ontology_term=GO:0019242,GO:0008929;gbkey=CDS;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752212.1;locus_tag=LDO49_RS09045;product=methylglyoxal synthase;protein_id=WP_042976092.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 11430 12209 . - . ID=gene-LDO49_RS09050;Name=LDO49_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09050;old_locus_tag=BCEP4_1440013 NZ_CAJZAV010000051.1 Protein Homology CDS 11430 12209 . - 0 ID=cds-WP_042976090.1;Parent=gene-LDO49_RS09050;Dbxref=GenBank:WP_042976090.1;Name=WP_042976090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892270.1;locus_tag=LDO49_RS09050;product=SDR family oxidoreductase;protein_id=WP_042976090.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 12442 13092 . + . ID=gene-LDO49_RS09055;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=LDO49_RS09055;old_locus_tag=BCEP4_1440014 NZ_CAJZAV010000051.1 Protein Homology CDS 12442 13092 . + 0 ID=cds-WP_011352740.1;Parent=gene-LDO49_RS09055;Dbxref=GenBank:WP_011352740.1;Name=WP_011352740.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091140.1;locus_tag=LDO49_RS09055;product=uracil phosphoribosyltransferase;protein_id=WP_011352740.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 13310 14038 . + . ID=gene-LDO49_RS09060;Name=LDO49_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09060;old_locus_tag=BCEP4_1440015 NZ_CAJZAV010000051.1 Protein Homology CDS 13310 14038 . + 0 ID=cds-WP_006478227.1;Parent=gene-LDO49_RS09060;Dbxref=GenBank:WP_006478227.1;Name=WP_006478227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091139.1;locus_tag=LDO49_RS09060;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_006478227.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 14143 15420 . + . ID=gene-LDO49_RS09065;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=LDO49_RS09065;old_locus_tag=BCEP4_1440016 NZ_CAJZAV010000051.1 Protein Homology CDS 14143 15420 . + 0 ID=cds-WP_021161100.1;Parent=gene-LDO49_RS09065;Dbxref=GenBank:WP_021161100.1;Name=WP_021161100.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331565.1;locus_tag=LDO49_RS09065;product=phosphoribosylamine--glycine ligase;protein_id=WP_021161100.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 15539 16459 . + . ID=gene-LDO49_RS09070;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=LDO49_RS09070;old_locus_tag=BCEP4_1440017 NZ_CAJZAV010000051.1 Protein Homology CDS 15539 16459 . + 0 ID=cds-WP_021161098.1;Parent=gene-LDO49_RS09070;Dbxref=GenBank:WP_021161098.1;Name=WP_021161098.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405601.1;locus_tag=LDO49_RS09070;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_021161098.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 16501 17202 . + . ID=gene-LDO49_RS09075;Name=LDO49_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09075;old_locus_tag=BCEP4_1440018 NZ_CAJZAV010000051.1 Protein Homology CDS 16501 17202 . + 0 ID=cds-WP_230944208.1;Parent=gene-LDO49_RS09075;Dbxref=GenBank:WP_230944208.1;Name=WP_230944208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364347.1;locus_tag=LDO49_RS09075;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_230944208.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 17207 17653 . + . ID=gene-LDO49_RS09080;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=LDO49_RS09080;old_locus_tag=BCEP4_1440019 NZ_CAJZAV010000051.1 Protein Homology CDS 17207 17653 . + 0 ID=cds-WP_048020458.1;Parent=gene-LDO49_RS09080;Dbxref=GenBank:WP_048020458.1;Name=WP_048020458.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398740.1;locus_tag=LDO49_RS09080;product=ribosome silencing factor;protein_id=WP_048020458.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 17679 18149 . + . ID=gene-LDO49_RS09085;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=LDO49_RS09085;old_locus_tag=BCEP4_1440020 NZ_CAJZAV010000051.1 Protein Homology CDS 17679 18149 . + 0 ID=cds-WP_006484265.1;Parent=gene-LDO49_RS09085;Dbxref=GenBank:WP_006484265.1;Name=WP_006484265.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352746.1;locus_tag=LDO49_RS09085;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_006484265.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 18201 18833 . + . ID=gene-LDO49_RS09090;Name=LDO49_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09090;old_locus_tag=BCEP4_1440021 NZ_CAJZAV010000051.1 Protein Homology CDS 18201 18833 . + 0 ID=cds-WP_060072155.1;Parent=gene-LDO49_RS09090;Dbxref=GenBank:WP_060072155.1;Name=WP_060072155.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352747.1;locus_tag=LDO49_RS09090;product=Maf family protein;protein_id=WP_060072155.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 18842 20311 . + . ID=gene-LDO49_RS09095;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=LDO49_RS09095;old_locus_tag=BCEP4_1440022 NZ_CAJZAV010000051.1 Protein Homology CDS 18842 20311 . + 0 ID=cds-WP_021161094.1;Parent=gene-LDO49_RS09095;Dbxref=GenBank:WP_021161094.1;Name=WP_021161094.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545847.1;locus_tag=LDO49_RS09095;product=ribonuclease G;protein_id=WP_021161094.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq pseudogene 20329 20711 . - . ID=gene-LDO49_RS09100;Name=LDO49_RS09100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS09100;old_locus_tag=BCEP4_1440023;pseudo=true NZ_CAJZAV010000051.1 Protein Homology CDS 20329 20711 . - 0 ID=cds-LDO49_RS09100;Parent=gene-LDO49_RS09100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766368.1;locus_tag=LDO49_RS09100;product=DUF1493 family protein;pseudo=true;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 21044 21379 . + . ID=gene-LDO49_RS09105;Name=LDO49_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09105;old_locus_tag=BCEP4_1440025 NZ_CAJZAV010000051.1 Protein Homology CDS 21044 21379 . + 0 ID=cds-WP_027786829.1;Parent=gene-LDO49_RS09105;Dbxref=GenBank:WP_027786829.1;Name=WP_027786829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478219.1;locus_tag=LDO49_RS09105;product=YggL family protein;protein_id=WP_027786829.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 21678 22640 . + . ID=gene-LDO49_RS09110;Name=LDO49_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09110;old_locus_tag=BCEP4_1440027 NZ_CAJZAV010000051.1 Protein Homology CDS 21678 22640 . + 0 ID=cds-WP_021161090.1;Parent=gene-LDO49_RS09110;Dbxref=GenBank:WP_021161090.1;Name=WP_021161090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415303.1;locus_tag=LDO49_RS09110;product=PRC-barrel domain-containing protein;protein_id=WP_021161090.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 22637 23905 . + . ID=gene-LDO49_RS09115;Name=LDO49_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09115;old_locus_tag=BCEP4_1440026 NZ_CAJZAV010000051.1 Protein Homology CDS 22637 23905 . + 0 ID=cds-WP_059618888.1;Parent=gene-LDO49_RS09115;Dbxref=GenBank:WP_059618888.1;Name=WP_059618888.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761058.1;locus_tag=LDO49_RS09115;product=MFS transporter;protein_id=WP_059618888.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 23947 24513 . + . ID=gene-LDO49_RS09120;Name=LDO49_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09120;old_locus_tag=BCEP4_1440028 NZ_CAJZAV010000051.1 Protein Homology CDS 23947 24513 . + 0 ID=cds-WP_021161088.1;Parent=gene-LDO49_RS09120;Dbxref=GenBank:WP_021161088.1;Name=WP_021161088.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761059.1;locus_tag=LDO49_RS09120;product=FUSC family protein;protein_id=WP_021161088.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 24578 24958 . - . ID=gene-LDO49_RS09125;Name=LDO49_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09125;old_locus_tag=BCEP4_1440029 NZ_CAJZAV010000051.1 Protein Homology CDS 24578 24958 . - 0 ID=cds-WP_060072153.1;Parent=gene-LDO49_RS09125;Dbxref=GenBank:WP_060072153.1;Name=WP_060072153.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352768.1;locus_tag=LDO49_RS09125;product=RcnB family protein;protein_id=WP_060072153.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 25053 26804 . - . ID=gene-LDO49_RS09130;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=LDO49_RS09130;old_locus_tag=BCEP4_1440030 NZ_CAJZAV010000051.1 Protein Homology CDS 25053 26804 . - 0 ID=cds-WP_034195746.1;Parent=gene-LDO49_RS09130;Dbxref=GenBank:WP_034195746.1;Name=WP_034195746.1;Ontology_term=GO:0006869,GO:0005319,GO:0005524,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=lipid transporter activity|0005319||IEA,ATP binding|0005524||IEA;go_process=lipid transport|0006869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896445.1;locus_tag=LDO49_RS09130;product=lipid A export permease/ATP-binding protein MsbA;protein_id=WP_034195746.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 27039 27791 . + . ID=gene-LDO49_RS09135;Name=LDO49_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09135;old_locus_tag=BCEP4_1440031 NZ_CAJZAV010000051.1 Protein Homology CDS 27039 27791 . + 0 ID=cds-WP_048020453.1;Parent=gene-LDO49_RS09135;Dbxref=GenBank:WP_048020453.1;Name=WP_048020453.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364356.1;locus_tag=LDO49_RS09135;product=glycosyltransferase family 2 protein;protein_id=WP_048020453.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 27916 28758 . + . ID=gene-LDO49_RS09140;Name=LDO49_RS09140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09140;old_locus_tag=BCEP4_1440032 NZ_CAJZAV010000051.1 Protein Homology CDS 27916 28758 . + 0 ID=cds-WP_060072151.1;Parent=gene-LDO49_RS09140;Dbxref=GenBank:WP_060072151.1;Name=WP_060072151.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409051.1;locus_tag=LDO49_RS09140;product=glycosyltransferase family 2 protein;protein_id=WP_060072151.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 28894 30174 . + . ID=gene-LDO49_RS09145;Name=LDO49_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09145;old_locus_tag=BCEP4_1440033 NZ_CAJZAV010000051.1 Protein Homology CDS 28894 30174 . + 0 ID=cds-WP_021161082.1;Parent=gene-LDO49_RS09145;Dbxref=GenBank:WP_021161082.1;Name=WP_021161082.1;Ontology_term=GO:0009103,GO:0008754,GO:0008755,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=O-antigen ligase activity|0008754||IEA,O antigen polymerase activity|0008755||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657533.1;locus_tag=LDO49_RS09145;product=O-antigen ligase family protein;protein_id=WP_021161082.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 30328 31506 . - . ID=gene-LDO49_RS09150;Name=LDO49_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09150;old_locus_tag=BCEP4_1440034 NZ_CAJZAV010000051.1 Protein Homology CDS 30328 31506 . - 0 ID=cds-WP_060072149.1;Parent=gene-LDO49_RS09150;Dbxref=GenBank:WP_060072149.1;Name=WP_060072149.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328936.1;locus_tag=LDO49_RS09150;product=glycosyltransferase family 9 protein;protein_id=WP_060072149.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 31742 32445 . - . ID=gene-LDO49_RS09155;Name=LDO49_RS09155;end_range=32445,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09155;old_locus_tag=BCEP4_1440035;partial=true NZ_CAJZAV010000051.1 Protein Homology CDS 31742 32445 . - 2 ID=cds-WP_443797931.1;Parent=gene-LDO49_RS09155;Dbxref=GenBank:WP_443797931.1;Name=WP_443797931.1;Ontology_term=GO:0016757;end_range=32445,.;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478209.1;locus_tag=LDO49_RS09155;partial=true;product=glycosyltransferase family 9 protein;protein_id=WP_443797931.1;transl_table=11 NZ_CAJZAV010000051.1 RefSeq pseudogene 32456 32616 . - . ID=gene-LDO49_RS37910;Name=LDO49_RS37910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37910;old_locus_tag=BCEP4_1440036;partial=true;pseudo=true;start_range=.,32456 NZ_CAJZAV010000051.1 Protein Homology CDS 32456 32616 . - 0 ID=cds-LDO49_RS37910;Parent=gene-LDO49_RS37910;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478209.1;locus_tag=LDO49_RS37910;partial=true;product=glycosyltransferase family 9 protein;pseudo=true;start_range=.,32456;transl_table=11 NZ_CAJZAV010000051.1 RefSeq gene 32922 33122 . - . ID=gene-LDO49_RS09160;Name=LDO49_RS09160;end_range=33122,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09160;old_locus_tag=BCEP4_1440037;partial=true NZ_CAJZAV010000051.1 Protein Homology CDS 32922 33122 . - 0 ID=cds-WP_224051678.1;Parent=gene-LDO49_RS09160;Dbxref=GenBank:WP_224051678.1;Name=WP_224051678.1;end_range=33122,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478208.1;locus_tag=LDO49_RS09160;partial=true;product=hypothetical protein;protein_id=WP_224051678.1;transl_table=11 ##sequence-region NZ_CAJZAV010000052.1 1 13949 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000052.1 RefSeq region 1 13949 . + . ID=NZ_CAJZAV010000052.1:1..13949;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_145 NZ_CAJZAV010000052.1 RefSeq gene 132 1469 . - . ID=gene-LDO49_RS09165;Name=LDO49_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09165;old_locus_tag=BCEP4_1450001 NZ_CAJZAV010000052.1 Protein Homology CDS 132 1469 . - 0 ID=cds-WP_048025396.1;Parent=gene-LDO49_RS09165;Dbxref=GenBank:WP_048025396.1;Name=WP_048025396.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524,GO:0046872;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851914.1;locus_tag=LDO49_RS09165;product=glutamine synthetase family protein;protein_id=WP_048025396.1;transl_table=11 NZ_CAJZAV010000052.1 RefSeq gene 1499 2287 . - . ID=gene-LDO49_RS09170;Name=LDO49_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09170;old_locus_tag=BCEP4_1450002 NZ_CAJZAV010000052.1 Protein Homology CDS 1499 2287 . - 0 ID=cds-WP_021162117.1;Parent=gene-LDO49_RS09170;Dbxref=GenBank:WP_021162117.1;Name=WP_021162117.1;Ontology_term=GO:0016787,GO:0016811;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353442.1;locus_tag=LDO49_RS09170;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_021162117.1;transl_table=11 NZ_CAJZAV010000052.1 RefSeq gene 2571 2795 . - . ID=gene-LDO49_RS09175;Name=LDO49_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09175 NZ_CAJZAV010000052.1 Protein Homology CDS 2571 2795 . - 0 ID=cds-WP_072437498.1;Parent=gene-LDO49_RS09175;Dbxref=GenBank:WP_072437498.1;Name=WP_072437498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886231.1;locus_tag=LDO49_RS09175;product=hypothetical protein;protein_id=WP_072437498.1;transl_table=11 NZ_CAJZAV010000052.1 RefSeq gene 3209 3760 . + . ID=gene-LDO49_RS09180;Name=LDO49_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09180;old_locus_tag=BCEP4_1450004 NZ_CAJZAV010000052.1 Protein Homology CDS 3209 3760 . + 0 ID=cds-WP_042976781.1;Parent=gene-LDO49_RS09180;Dbxref=GenBank:WP_042976781.1;Name=WP_042976781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529988.1;locus_tag=LDO49_RS09180;product=cupin domain-containing protein;protein_id=WP_042976781.1;transl_table=11 NZ_CAJZAV010000052.1 RefSeq gene 3858 5348 . + . ID=gene-LDO49_RS09185;Name=LDO49_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09185;old_locus_tag=BCEP4_1450005 NZ_CAJZAV010000052.1 Protein Homology CDS 3858 5348 . + 0 ID=cds-WP_048025394.1;Parent=gene-LDO49_RS09185;Dbxref=GenBank:WP_048025394.1;Name=WP_048025394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108095.1;locus_tag=LDO49_RS09185;product=aldehyde dehydrogenase;protein_id=WP_048025394.1;transl_table=11 NZ_CAJZAV010000052.1 RefSeq pseudogene 5445 5643 . - . ID=gene-LDO49_RS09190;Name=LDO49_RS09190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS09190;old_locus_tag=BCEP4_1450006;pseudo=true NZ_CAJZAV010000052.1 Protein Homology CDS 5445 5643 . - 0 ID=cds-LDO49_RS09190;Parent=gene-LDO49_RS09190;Note=frameshifted;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364874.1;locus_tag=LDO49_RS09190;product=heavy-metal-associated domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAV010000052.1 RefSeq gene 6008 6340 . + . ID=gene-LDO49_RS09195;Name=LDO49_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09195;old_locus_tag=BCEP4_1450009 NZ_CAJZAV010000052.1 Protein Homology CDS 6008 6340 . + 0 ID=cds-WP_021162111.1;Parent=gene-LDO49_RS09195;Dbxref=GenBank:WP_021162111.1;Name=WP_021162111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407998.1;locus_tag=LDO49_RS09195;product=cupredoxin domain-containing protein;protein_id=WP_021162111.1;transl_table=11 NZ_CAJZAV010000052.1 RefSeq gene 6353 7189 . + . ID=gene-LDO49_RS09200;Name=LDO49_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09200;old_locus_tag=BCEP4_1450010 NZ_CAJZAV010000052.1 Protein Homology CDS 6353 7189 . + 0 ID=cds-WP_048025393.1;Parent=gene-LDO49_RS09200;Dbxref=GenBank:WP_048025393.1;Name=WP_048025393.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090450.1;locus_tag=LDO49_RS09200;product=FTR1 family iron permease;protein_id=WP_048025393.1;transl_table=11 NZ_CAJZAV010000052.1 RefSeq gene 7299 7517 . - . ID=gene-LDO49_RS09205;Name=LDO49_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09205;old_locus_tag=BCEP4_1450011 NZ_CAJZAV010000052.1 Protein Homology CDS 7299 7517 . - 0 ID=cds-WP_021162109.1;Parent=gene-LDO49_RS09205;Dbxref=GenBank:WP_021162109.1;Name=WP_021162109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334484.1;locus_tag=LDO49_RS09205;product=hypothetical protein;protein_id=WP_021162109.1;transl_table=11 NZ_CAJZAV010000052.1 RefSeq gene 7517 7972 . - . ID=gene-LDO49_RS09210;Name=LDO49_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09210;old_locus_tag=BCEP4_1450012 NZ_CAJZAV010000052.1 Protein Homology CDS 7517 7972 . - 0 ID=cds-WP_021162108.1;Parent=gene-LDO49_RS09210;Dbxref=GenBank:WP_021162108.1;Name=WP_021162108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353434.1;locus_tag=LDO49_RS09210;product=hypothetical protein;protein_id=WP_021162108.1;transl_table=11 NZ_CAJZAV010000052.1 RefSeq gene 8055 8375 . - . ID=gene-LDO49_RS09215;Name=LDO49_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09215;old_locus_tag=BCEP4_1450014 NZ_CAJZAV010000052.1 Protein Homology CDS 8055 8375 . - 0 ID=cds-WP_021162107.1;Parent=gene-LDO49_RS09215;Dbxref=GenBank:WP_021162107.1;Name=WP_021162107.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402798.1;locus_tag=LDO49_RS09215;product=helix-turn-helix domain-containing protein;protein_id=WP_021162107.1;transl_table=11 NZ_CAJZAV010000052.1 RefSeq pseudogene 8371 8574 . - . ID=gene-LDO49_RS37370;Name=LDO49_RS37370;end_range=8574,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37370;partial=true;pseudo=true;start_range=.,8371 NZ_CAJZAV010000052.1 Protein Homology CDS 8371 8574 . - 0 ID=cds-LDO49_RS37370;Parent=gene-LDO49_RS37370;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=8574,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477597.1;locus_tag=LDO49_RS37370;partial=true;product=type II toxin-antitoxin system RelE/ParE family toxin;pseudo=true;start_range=.,8371;transl_table=11 NZ_CAJZAV010000052.1 RefSeq gene 8722 10539 . - . ID=gene-LDO49_RS09220;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LDO49_RS09220;old_locus_tag=BCEP4_1450015 NZ_CAJZAV010000052.1 Protein Homology CDS 8722 10539 . - 0 ID=cds-WP_059619694.1;Parent=gene-LDO49_RS09220;Dbxref=GenBank:WP_059619694.1;Name=WP_059619694.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011000145.1;locus_tag=LDO49_RS09220;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_059619694.1;transl_table=11 NZ_CAJZAV010000052.1 RefSeq gene 10593 11954 . - . ID=gene-LDO49_RS09225;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=LDO49_RS09225;old_locus_tag=BCEP4_1450016 NZ_CAJZAV010000052.1 Protein Homology CDS 10593 11954 . - 0 ID=cds-WP_224051679.1;Parent=gene-LDO49_RS09225;Dbxref=GenBank:WP_224051679.1;Name=WP_224051679.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134,GO:0005737;gbkey=CDS;gene=glmU;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353430.1;locus_tag=LDO49_RS09225;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_224051679.1;transl_table=11 NZ_CAJZAV010000052.1 RefSeq gene 12090 13100 . - . ID=gene-LDO49_RS09230;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=LDO49_RS09230;old_locus_tag=BCEP4_1450017 NZ_CAJZAV010000052.1 Protein Homology CDS 12090 13100 . - 0 ID=cds-WP_059490412.1;Parent=gene-LDO49_RS09230;Dbxref=GenBank:WP_059490412.1;Name=WP_059490412.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214279.1;locus_tag=LDO49_RS09230;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_059490412.1;transl_table=11 NZ_CAJZAV010000052.1 RefSeq gene 13097 13501 . - . ID=gene-LDO49_RS09235;Name=LDO49_RS09235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09235;old_locus_tag=BCEP4_1450018 NZ_CAJZAV010000052.1 Protein Homology CDS 13097 13501 . - 0 ID=cds-WP_006407992.1;Parent=gene-LDO49_RS09235;Dbxref=GenBank:WP_006407992.1;Name=WP_006407992.1;Ontology_term=GO:0046654,GO:0046656,GO:0004150;gbkey=CDS;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA,folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893357.1;locus_tag=LDO49_RS09235;product=dihydroneopterin aldolase;protein_id=WP_006407992.1;transl_table=11 NZ_CAJZAV010000052.1 RefSeq gene 13580 13949 . - . ID=gene-LDO49_RS09240;Name=LDO49_RS09240;end_range=13949,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09240;old_locus_tag=BCEP4_1450019;partial=true NZ_CAJZAV010000052.1 Protein Homology CDS 13580 13949 . - 1 ID=cds-WP_372585835.1;Parent=gene-LDO49_RS09240;Dbxref=GenBank:WP_372585835.1;Name=WP_372585835.1;end_range=13949,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214278.1;locus_tag=LDO49_RS09240;partial=true;product=Rossmann fold domain-containing protein;protein_id=WP_372585835.1;transl_table=11 ##sequence-region NZ_CAJZAV010000053.1 1 40256 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000053.1 RefSeq region 1 40256 . + . ID=NZ_CAJZAV010000053.1:1..40256;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_146 NZ_CAJZAV010000053.1 RefSeq pseudogene 1 122 . + . ID=gene-LDO49_RS09245;Name=LDO49_RS09245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS09245;old_locus_tag=BCEP4_1460001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000053.1 Protein Homology CDS 1 122 . + 2 ID=cds-LDO49_RS09245;Parent=gene-LDO49_RS09245;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011299314.1;locus_tag=LDO49_RS09245;partial=true;product=elongation factor Tu;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 407 718 . + . ID=gene-LDO49_RS09250;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=LDO49_RS09250;old_locus_tag=BCEP4_1460002 NZ_CAJZAV010000053.1 Protein Homology CDS 407 718 . + 0 ID=cds-WP_004199280.1;Parent=gene-LDO49_RS09250;Dbxref=GenBank:WP_004199280.1;Name=WP_004199280.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199280.1;locus_tag=LDO49_RS09250;product=30S ribosomal protein S10;protein_id=WP_004199280.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 897 1547 . + . ID=gene-LDO49_RS09255;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=LDO49_RS09255;old_locus_tag=BCEP4_1460003 NZ_CAJZAV010000053.1 Protein Homology CDS 897 1547 . + 0 ID=cds-WP_224051680.1;Parent=gene-LDO49_RS09255;Dbxref=GenBank:WP_224051680.1;Name=WP_224051680.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212557.1;locus_tag=LDO49_RS09255;product=50S ribosomal protein L3;protein_id=WP_224051680.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 1547 2167 . + . ID=gene-LDO49_RS09260;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=LDO49_RS09260;old_locus_tag=BCEP4_1460004 NZ_CAJZAV010000053.1 Protein Homology CDS 1547 2167 . + 0 ID=cds-WP_006477192.1;Parent=gene-LDO49_RS09260;Dbxref=GenBank:WP_006477192.1;Name=WP_006477192.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350675.1;locus_tag=LDO49_RS09260;product=50S ribosomal protein L4;protein_id=WP_006477192.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 2164 2478 . + . ID=gene-LDO49_RS09265;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=LDO49_RS09265;old_locus_tag=BCEP4_1460005 NZ_CAJZAV010000053.1 Protein Homology CDS 2164 2478 . + 0 ID=cds-WP_004199275.1;Parent=gene-LDO49_RS09265;Dbxref=GenBank:WP_004199275.1;Name=WP_004199275.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008343846.1;locus_tag=LDO49_RS09265;product=50S ribosomal protein L23;protein_id=WP_004199275.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 2481 3308 . + . ID=gene-LDO49_RS09270;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=LDO49_RS09270;old_locus_tag=BCEP4_1460006 NZ_CAJZAV010000053.1 Protein Homology CDS 2481 3308 . + 0 ID=cds-WP_006482900.1;Parent=gene-LDO49_RS09270;Dbxref=GenBank:WP_006482900.1;Name=WP_006482900.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009770933.1;locus_tag=LDO49_RS09270;product=50S ribosomal protein L2;protein_id=WP_006482900.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 3319 3594 . + . ID=gene-LDO49_RS09275;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=LDO49_RS09275;old_locus_tag=BCEP4_1460007 NZ_CAJZAV010000053.1 Protein Homology CDS 3319 3594 . + 0 ID=cds-WP_004199273.1;Parent=gene-LDO49_RS09275;Dbxref=GenBank:WP_004199273.1;Name=WP_004199273.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440478.1;locus_tag=LDO49_RS09275;product=30S ribosomal protein S19;protein_id=WP_004199273.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 3607 3936 . + . ID=gene-LDO49_RS09280;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=LDO49_RS09280;old_locus_tag=BCEP4_1460008 NZ_CAJZAV010000053.1 Protein Homology CDS 3607 3936 . + 0 ID=cds-WP_004199272.1;Parent=gene-LDO49_RS09280;Dbxref=GenBank:WP_004199272.1;Name=WP_004199272.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018420150.1;locus_tag=LDO49_RS09280;product=50S ribosomal protein L22;protein_id=WP_004199272.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 3948 4748 . + . ID=gene-LDO49_RS09285;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=LDO49_RS09285;old_locus_tag=BCEP4_1460009 NZ_CAJZAV010000053.1 Protein Homology CDS 3948 4748 . + 0 ID=cds-WP_006482899.1;Parent=gene-LDO49_RS09285;Dbxref=GenBank:WP_006482899.1;Name=WP_006482899.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185240.1;locus_tag=LDO49_RS09285;product=30S ribosomal protein S3;protein_id=WP_006482899.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 4751 5167 . + . ID=gene-LDO49_RS09290;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=LDO49_RS09290;old_locus_tag=BCEP4_1460010 NZ_CAJZAV010000053.1 Protein Homology CDS 4751 5167 . + 0 ID=cds-WP_006482873.1;Parent=gene-LDO49_RS09290;Dbxref=GenBank:WP_006482873.1;Name=WP_006482873.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013340739.1;locus_tag=LDO49_RS09290;product=50S ribosomal protein L16;protein_id=WP_006482873.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 5177 5371 . + . ID=gene-LDO49_RS09295;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=LDO49_RS09295;old_locus_tag=BCEP4_1460011 NZ_CAJZAV010000053.1 Protein Homology CDS 5177 5371 . + 0 ID=cds-WP_006400652.1;Parent=gene-LDO49_RS09295;Dbxref=GenBank:WP_006400652.1;Name=WP_006400652.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199856.1;locus_tag=LDO49_RS09295;product=50S ribosomal protein L29;protein_id=WP_006400652.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 5368 5640 . + . ID=gene-LDO49_RS09300;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=LDO49_RS09300;old_locus_tag=BCEP4_1460012 NZ_CAJZAV010000053.1 Protein Homology CDS 5368 5640 . + 0 ID=cds-WP_006477189.1;Parent=gene-LDO49_RS09300;Dbxref=GenBank:WP_006477189.1;Name=WP_006477189.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998479.1;locus_tag=LDO49_RS09300;product=30S ribosomal protein S17;protein_id=WP_006477189.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 5950 6318 . + . ID=gene-LDO49_RS09305;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=LDO49_RS09305;old_locus_tag=BCEP4_1460013 NZ_CAJZAV010000053.1 Protein Homology CDS 5950 6318 . + 0 ID=cds-WP_006482918.1;Parent=gene-LDO49_RS09305;Dbxref=GenBank:WP_006482918.1;Name=WP_006482918.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009124801.1;locus_tag=LDO49_RS09305;product=50S ribosomal protein L14;protein_id=WP_006482918.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 6328 6636 . + . ID=gene-LDO49_RS09310;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=LDO49_RS09310;old_locus_tag=BCEP4_1460014 NZ_CAJZAV010000053.1 Protein Homology CDS 6328 6636 . + 0 ID=cds-WP_006477187.1;Parent=gene-LDO49_RS09310;Dbxref=GenBank:WP_006477187.1;Name=WP_006477187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197950.1;locus_tag=LDO49_RS09310;product=50S ribosomal protein L24;protein_id=WP_006477187.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 6653 7192 . + . ID=gene-LDO49_RS09315;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=LDO49_RS09315;old_locus_tag=BCEP4_1460015 NZ_CAJZAV010000053.1 Protein Homology CDS 6653 7192 . + 0 ID=cds-WP_006482882.1;Parent=gene-LDO49_RS09315;Dbxref=GenBank:WP_006482882.1;Name=WP_006482882.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007875323.1;locus_tag=LDO49_RS09315;product=50S ribosomal protein L5;protein_id=WP_006482882.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 7200 7505 . + . ID=gene-LDO49_RS09320;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=LDO49_RS09320;old_locus_tag=BCEP4_1460016 NZ_CAJZAV010000053.1 Protein Homology CDS 7200 7505 . + 0 ID=cds-WP_011350676.1;Parent=gene-LDO49_RS09320;Dbxref=GenBank:WP_011350676.1;Name=WP_011350676.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197948.1;locus_tag=LDO49_RS09320;product=30S ribosomal protein S14;protein_id=WP_011350676.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 7520 7915 . + . ID=gene-LDO49_RS09325;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=LDO49_RS09325;old_locus_tag=BCEP4_1460017 NZ_CAJZAV010000053.1 Protein Homology CDS 7520 7915 . + 0 ID=cds-WP_006477185.1;Parent=gene-LDO49_RS09325;Dbxref=GenBank:WP_006477185.1;Name=WP_006477185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011799763.1;locus_tag=LDO49_RS09325;product=30S ribosomal protein S8;protein_id=WP_006477185.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 7934 8464 . + . ID=gene-LDO49_RS09330;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=LDO49_RS09330;old_locus_tag=BCEP4_1460018 NZ_CAJZAV010000053.1 Protein Homology CDS 7934 8464 . + 0 ID=cds-WP_006758786.1;Parent=gene-LDO49_RS09330;Dbxref=GenBank:WP_006758786.1;Name=WP_006758786.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734367.1;locus_tag=LDO49_RS09330;product=50S ribosomal protein L6;protein_id=WP_006758786.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 8477 8842 . + . ID=gene-LDO49_RS09335;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=LDO49_RS09335;old_locus_tag=BCEP4_1460019 NZ_CAJZAV010000053.1 Protein Homology CDS 8477 8842 . + 0 ID=cds-WP_006477183.1;Parent=gene-LDO49_RS09335;Dbxref=GenBank:WP_006477183.1;Name=WP_006477183.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013434799.1;locus_tag=LDO49_RS09335;product=50S ribosomal protein L18;protein_id=WP_006477183.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 8857 9375 . + . ID=gene-LDO49_RS09340;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=LDO49_RS09340;old_locus_tag=BCEP4_1460020 NZ_CAJZAV010000053.1 Protein Homology CDS 8857 9375 . + 0 ID=cds-WP_006482895.1;Parent=gene-LDO49_RS09340;Dbxref=GenBank:WP_006482895.1;Name=WP_006482895.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011002906.1;locus_tag=LDO49_RS09340;product=30S ribosomal protein S5;protein_id=WP_006482895.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 9391 9573 . + . ID=gene-LDO49_RS09345;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=LDO49_RS09345;old_locus_tag=BCEP4_1460021 NZ_CAJZAV010000053.1 Protein Homology CDS 9391 9573 . + 0 ID=cds-WP_006400644.1;Parent=gene-LDO49_RS09345;Dbxref=GenBank:WP_006400644.1;Name=WP_006400644.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998470.1;locus_tag=LDO49_RS09345;product=50S ribosomal protein L30;protein_id=WP_006400644.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 9600 10034 . + . ID=gene-LDO49_RS09350;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=LDO49_RS09350;old_locus_tag=BCEP4_1460022 NZ_CAJZAV010000053.1 Protein Homology CDS 9600 10034 . + 0 ID=cds-WP_006482880.1;Parent=gene-LDO49_RS09350;Dbxref=GenBank:WP_006482880.1;Name=WP_006482880.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197941.1;locus_tag=LDO49_RS09350;product=50S ribosomal protein L15;protein_id=WP_006482880.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 10076 11425 . + . ID=gene-LDO49_RS09355;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=LDO49_RS09355;old_locus_tag=BCEP4_1460023 NZ_CAJZAV010000053.1 Protein Homology CDS 10076 11425 . + 0 ID=cds-WP_006482915.1;Parent=gene-LDO49_RS09355;Dbxref=GenBank:WP_006482915.1;Name=WP_006482915.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440464.1;locus_tag=LDO49_RS09355;product=preprotein translocase subunit SecY;protein_id=WP_006482915.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 11434 11652 . + . ID=gene-LDO49_RS09360;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=LDO49_RS09360;old_locus_tag=BCEP4_1460024 NZ_CAJZAV010000053.1 Protein Homology CDS 11434 11652 . + 0 ID=cds-WP_004521905.1;Parent=gene-LDO49_RS09360;Dbxref=GenBank:WP_004521905.1;Name=WP_004521905.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018149800.1;locus_tag=LDO49_RS09360;product=translation initiation factor IF-1;protein_id=WP_004521905.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 11673 11789 . + . ID=gene-LDO49_RS09365;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=LDO49_RS09365 NZ_CAJZAV010000053.1 Protein Homology CDS 11673 11789 . + 0 ID=cds-WP_004199844.1;Parent=gene-LDO49_RS09365;Dbxref=GenBank:WP_004199844.1;Name=WP_004199844.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006232360.1;locus_tag=LDO49_RS09365;product=50S ribosomal protein L36;protein_id=WP_004199844.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 11828 12193 . + . ID=gene-LDO49_RS09370;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=LDO49_RS09370;old_locus_tag=BCEP4_1460025 NZ_CAJZAV010000053.1 Protein Homology CDS 11828 12193 . + 0 ID=cds-WP_006400641.1;Parent=gene-LDO49_RS09370;Dbxref=GenBank:WP_006400641.1;Name=WP_006400641.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440462.1;locus_tag=LDO49_RS09370;product=30S ribosomal protein S13;protein_id=WP_006400641.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 12222 12623 . + . ID=gene-LDO49_RS09375;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=LDO49_RS09375;old_locus_tag=BCEP4_1460026 NZ_CAJZAV010000053.1 Protein Homology CDS 12222 12623 . + 0 ID=cds-WP_004197937.1;Parent=gene-LDO49_RS09375;Dbxref=GenBank:WP_004197937.1;Name=WP_004197937.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106947.1;locus_tag=LDO49_RS09375;product=30S ribosomal protein S11;protein_id=WP_004197937.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 12778 13401 . + . ID=gene-LDO49_RS09380;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=LDO49_RS09380;old_locus_tag=BCEP4_1460027 NZ_CAJZAV010000053.1 Protein Homology CDS 12778 13401 . + 0 ID=cds-WP_021161733.1;Parent=gene-LDO49_RS09380;Dbxref=GenBank:WP_021161733.1;Name=WP_021161733.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009888438.1;locus_tag=LDO49_RS09380;product=30S ribosomal protein S4;protein_id=WP_021161733.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 13526 14503 . + . ID=gene-LDO49_RS09385;Name=LDO49_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09385;old_locus_tag=BCEP4_1460028 NZ_CAJZAV010000053.1 Protein Homology CDS 13526 14503 . + 0 ID=cds-WP_006477176.1;Parent=gene-LDO49_RS09385;Dbxref=GenBank:WP_006477176.1;Name=WP_006477176.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440459.1;locus_tag=LDO49_RS09385;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_006477176.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 14652 15047 . + . ID=gene-LDO49_RS09390;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=LDO49_RS09390;old_locus_tag=BCEP4_1460029 NZ_CAJZAV010000053.1 Protein Homology CDS 14652 15047 . + 0 ID=cds-WP_006477175.1;Parent=gene-LDO49_RS09390;Dbxref=GenBank:WP_006477175.1;Name=WP_006477175.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477175.1;locus_tag=LDO49_RS09390;product=50S ribosomal protein L17;protein_id=WP_006477175.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 15256 15582 . + . ID=gene-LDO49_RS09395;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=LDO49_RS09395;old_locus_tag=BCEP4_1460030 NZ_CAJZAV010000053.1 Protein Homology CDS 15256 15582 . + 0 ID=cds-WP_021161734.1;Parent=gene-LDO49_RS09395;Dbxref=GenBank:WP_021161734.1;Name=WP_021161734.1;Ontology_term=GO:0010038;gbkey=CDS;gene=cutA;go_process=response to metal ion|0010038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199838.1;locus_tag=LDO49_RS09395;product=divalent-cation tolerance protein CutA;protein_id=WP_021161734.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 15575 17425 . + . ID=gene-LDO49_RS09400;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;locus_tag=LDO49_RS09400;old_locus_tag=BCEP4_1460031 NZ_CAJZAV010000053.1 Protein Homology CDS 15575 17425 . + 0 ID=cds-WP_224051681.1;Parent=gene-LDO49_RS09400;Dbxref=GenBank:WP_224051681.1;Name=WP_224051681.1;Ontology_term=GO:0047134;gbkey=CDS;gene=dsbD;go_function=protein-disulfide reductase [NAD(P)H] activity|0047134||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327751.1;locus_tag=LDO49_RS09400;product=protein-disulfide reductase DsbD;protein_id=WP_224051681.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 17521 18519 . - . ID=gene-LDO49_RS09405;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=LDO49_RS09405;old_locus_tag=BCEP4_1460032 NZ_CAJZAV010000053.1 Protein Homology CDS 17521 18519 . - 0 ID=cds-WP_021161736.1;Parent=gene-LDO49_RS09405;Dbxref=GenBank:WP_021161736.1;Name=WP_021161736.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898350.1;locus_tag=LDO49_RS09405;product=porphobilinogen synthase;protein_id=WP_021161736.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 18773 19432 . - . ID=gene-LDO49_RS09410;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=LDO49_RS09410;old_locus_tag=BCEP4_1460033 NZ_CAJZAV010000053.1 Protein Homology CDS 18773 19432 . - 0 ID=cds-WP_021161737.1;Parent=gene-LDO49_RS09410;Dbxref=GenBank:WP_021161737.1;Name=WP_021161737.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350683.1;locus_tag=LDO49_RS09410;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_021161737.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 19647 20300 . + . ID=gene-LDO49_RS09415;Name=LDO49_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09415;old_locus_tag=BCEP4_1460034 NZ_CAJZAV010000053.1 Protein Homology CDS 19647 20300 . + 0 ID=cds-WP_224051683.1;Parent=gene-LDO49_RS09415;Dbxref=GenBank:WP_224051683.1;Name=WP_224051683.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492295.1;locus_tag=LDO49_RS09415;product=c-type cytochrome;protein_id=WP_224051683.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 20423 22639 . + . ID=gene-LDO49_RS09420;Name=LDO49_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09420;old_locus_tag=BCEP4_1460035 NZ_CAJZAV010000053.1 Protein Homology CDS 20423 22639 . + 0 ID=cds-WP_060070219.1;Parent=gene-LDO49_RS09420;Dbxref=GenBank:WP_060070219.1;Name=WP_060070219.1;Ontology_term=GO:0017004,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883014.1;locus_tag=LDO49_RS09420;product=cytochrome c biogenesis protein ResB;protein_id=WP_060070219.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 22644 23834 . + . ID=gene-LDO49_RS09425;Name=ccsB;gbkey=Gene;gene=ccsB;gene_biotype=protein_coding;locus_tag=LDO49_RS09425;old_locus_tag=BCEP4_1460036 NZ_CAJZAV010000053.1 Protein Homology CDS 22644 23834 . + 0 ID=cds-WP_021161740.1;Parent=gene-LDO49_RS09425;Dbxref=GenBank:WP_021161740.1;Name=WP_021161740.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsB;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655767.1;locus_tag=LDO49_RS09425;product=c-type cytochrome biogenesis protein CcsB;protein_id=WP_021161740.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 23993 24988 . + . ID=gene-LDO49_RS09430;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=LDO49_RS09430;old_locus_tag=BCEP4_1460037 NZ_CAJZAV010000053.1 Protein Homology CDS 23993 24988 . + 0 ID=cds-WP_027788573.1;Parent=gene-LDO49_RS09430;Dbxref=GenBank:WP_027788573.1;Name=WP_027788573.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008923064.1;locus_tag=LDO49_RS09430;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_027788573.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 25009 25695 . + . ID=gene-LDO49_RS09435;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=LDO49_RS09435;old_locus_tag=BCEP4_1460038 NZ_CAJZAV010000053.1 Protein Homology CDS 25009 25695 . + 0 ID=cds-WP_059555033.1;Parent=gene-LDO49_RS09435;Dbxref=GenBank:WP_059555033.1;Name=WP_059555033.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494453.1;locus_tag=LDO49_RS09435;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_059555033.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 25772 26050 . - . ID=gene-LDO49_RS09440;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=LDO49_RS09440 NZ_CAJZAV010000053.1 Protein Homology CDS 25772 26050 . - 0 ID=cds-WP_021161743.1;Parent=gene-LDO49_RS09440;Dbxref=GenBank:WP_021161743.1;Name=WP_021161743.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758797.1;locus_tag=LDO49_RS09440;product=LPS translocon maturation chaperone LptM;protein_id=WP_021161743.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 26087 26413 . + . ID=gene-LDO49_RS09445;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=LDO49_RS09445;old_locus_tag=BCEP4_1460040 NZ_CAJZAV010000053.1 Protein Homology CDS 26087 26413 . + 0 ID=cds-WP_021161744.1;Parent=gene-LDO49_RS09445;Dbxref=GenBank:WP_021161744.1;Name=WP_021161744.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196764.1;locus_tag=LDO49_RS09445;product=iron donor protein CyaY;protein_id=WP_021161744.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 26492 28879 . - . ID=gene-LDO49_RS09450;Name=LDO49_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09450;old_locus_tag=BCEP4_1460041 NZ_CAJZAV010000053.1 Protein Homology CDS 26492 28879 . - 0 ID=cds-WP_042978180.1;Parent=gene-LDO49_RS09450;Dbxref=GenBank:WP_042978180.1;Name=WP_042978180.1;Ontology_term=GO:0006508,GO:0009252,GO:0008658,GO:0008955,GO:0009002;gbkey=CDS;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898342.1;locus_tag=LDO49_RS09450;product=penicillin-binding protein 1A;protein_id=WP_042978180.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 29105 30025 . + . ID=gene-LDO49_RS09455;Name=LDO49_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09455;old_locus_tag=BCEP4_1460042 NZ_CAJZAV010000053.1 Protein Homology CDS 29105 30025 . + 0 ID=cds-WP_060070222.1;Parent=gene-LDO49_RS09455;Dbxref=GenBank:WP_060070222.1;Name=WP_060070222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546632.1;locus_tag=LDO49_RS09455;product=hypothetical protein;protein_id=WP_060070222.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 30022 30630 . + . ID=gene-LDO49_RS09460;Name=LDO49_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09460;old_locus_tag=BCEP4_1460043 NZ_CAJZAV010000053.1 Protein Homology CDS 30022 30630 . + 0 ID=cds-WP_060070225.1;Parent=gene-LDO49_RS09460;Dbxref=GenBank:WP_060070225.1;Name=WP_060070225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765398.1;locus_tag=LDO49_RS09460;product=hypothetical protein;protein_id=WP_060070225.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 30627 31493 . + . ID=gene-LDO49_RS09465;Name=LDO49_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09465;old_locus_tag=BCEP4_1460044 NZ_CAJZAV010000053.1 Protein Homology CDS 30627 31493 . + 0 ID=cds-WP_060070228.1;Parent=gene-LDO49_RS09465;Dbxref=GenBank:WP_060070228.1;Name=WP_060070228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546630.1;locus_tag=LDO49_RS09465;product=hypothetical protein;protein_id=WP_060070228.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 31490 33133 . + . ID=gene-LDO49_RS09470;Name=LDO49_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09470;old_locus_tag=BCEP4_1460045 NZ_CAJZAV010000053.1 Protein Homology CDS 31490 33133 . + 0 ID=cds-WP_224051682.1;Parent=gene-LDO49_RS09470;Dbxref=GenBank:WP_224051682.1;Name=WP_224051682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362906.1;locus_tag=LDO49_RS09470;product=type IV pilus secretin PilQ;protein_id=WP_224051682.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 33174 33728 . + . ID=gene-LDO49_RS09475;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=LDO49_RS09475;old_locus_tag=BCEP4_1460046 NZ_CAJZAV010000053.1 Protein Homology CDS 33174 33728 . + 0 ID=cds-WP_034189844.1;Parent=gene-LDO49_RS09475;Dbxref=GenBank:WP_034189844.1;Name=WP_034189844.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492299.1;locus_tag=LDO49_RS09475;product=shikimate kinase AroK;protein_id=WP_034189844.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 33725 34804 . + . ID=gene-LDO49_RS09480;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=LDO49_RS09480;old_locus_tag=BCEP4_1460047 NZ_CAJZAV010000053.1 Protein Homology CDS 33725 34804 . + 0 ID=cds-WP_027788565.1;Parent=gene-LDO49_RS09480;Dbxref=GenBank:WP_027788565.1;Name=WP_027788565.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004545609.1;locus_tag=LDO49_RS09480;product=3-dehydroquinate synthase;protein_id=WP_027788565.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 34847 36055 . + . ID=gene-LDO49_RS09485;Name=LDO49_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09485;old_locus_tag=BCEP4_1460048 NZ_CAJZAV010000053.1 Protein Homology CDS 34847 36055 . + 0 ID=cds-WP_021162708.1;Parent=gene-LDO49_RS09485;Dbxref=GenBank:WP_021162708.1;Name=WP_021162708.1;Ontology_term=GO:0016793;gbkey=CDS;go_function=triphosphoric monoester hydrolase activity|0016793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411276.1;locus_tag=LDO49_RS09485;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=WP_021162708.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 36146 37480 . + . ID=gene-LDO49_RS09490;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=LDO49_RS09490;old_locus_tag=BCEP4_1460049 NZ_CAJZAV010000053.1 Protein Homology CDS 36146 37480 . + 0 ID=cds-WP_048025746.1;Parent=gene-LDO49_RS09490;Dbxref=GenBank:WP_048025746.1;Name=WP_048025746.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333570.1;locus_tag=LDO49_RS09490;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_048025746.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 37578 38462 . + . ID=gene-LDO49_RS09495;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=LDO49_RS09495;old_locus_tag=BCEP4_1460051 NZ_CAJZAV010000053.1 Protein Homology CDS 37578 38462 . + 0 ID=cds-WP_027788563.1;Parent=gene-LDO49_RS09495;Dbxref=GenBank:WP_027788563.1;Name=WP_027788563.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906395.1;locus_tag=LDO49_RS09495;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_027788563.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 38459 39304 . + . ID=gene-LDO49_RS09500;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=LDO49_RS09500;old_locus_tag=BCEP4_1460052 NZ_CAJZAV010000053.1 Protein Homology CDS 38459 39304 . + 0 ID=cds-WP_027788562.1;Parent=gene-LDO49_RS09500;Dbxref=GenBank:WP_027788562.1;Name=WP_027788562.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477155.1;locus_tag=LDO49_RS09500;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_027788562.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq gene 39336 40067 . + . ID=gene-LDO49_RS09505;Name=ugpC;end_range=40067,.;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=LDO49_RS09505;old_locus_tag=BCEP4_1460053;partial=true NZ_CAJZAV010000053.1 Protein Homology CDS 39336 40067 . + 0 ID=cds-WP_443797932.1;Parent=gene-LDO49_RS09505;Dbxref=GenBank:WP_443797932.1;Name=WP_443797932.1;Ontology_term=GO:0005524,GO:0140359;end_range=40067,.;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212578.1;locus_tag=LDO49_RS09505;partial=true;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=WP_443797932.1;transl_table=11 NZ_CAJZAV010000053.1 RefSeq pseudogene 40078 40256 . + . ID=gene-LDO49_RS37915;Name=LDO49_RS37915;end_range=40256,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37915;partial=true;pseudo=true;start_range=.,40078 NZ_CAJZAV010000053.1 Protein Homology CDS 40078 40256 . + 1 ID=cds-LDO49_RS37915;Parent=gene-LDO49_RS37915;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=40256,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004547598.1;locus_tag=LDO49_RS37915;partial=true;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;pseudo=true;start_range=.,40078;transl_table=11 ##sequence-region NZ_CAJZAV010000054.1 1 53479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000054.1 RefSeq region 1 53479 . + . ID=NZ_CAJZAV010000054.1:1..53479;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_147 NZ_CAJZAV010000054.1 RefSeq gene 1 307 . + . ID=gene-LDO49_RS09510;Name=LDO49_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09510;old_locus_tag=BCEP4_1470001;partial=true;start_range=.,1 NZ_CAJZAV010000054.1 Protein Homology CDS 1 307 . + 1 ID=cds-WP_224051684.1;Parent=gene-LDO49_RS09510;Dbxref=GenBank:WP_224051684.1;Name=WP_224051684.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527621.1;locus_tag=LDO49_RS09510;partial=true;product=FecCD family ABC transporter permease;protein_id=WP_224051684.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 362 1738 . - . ID=gene-LDO49_RS09515;Name=LDO49_RS09515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09515;old_locus_tag=BCEP4_1470002 NZ_CAJZAV010000054.1 Protein Homology CDS 362 1738 . - 0 ID=cds-WP_060074732.1;Parent=gene-LDO49_RS09515;Dbxref=GenBank:WP_060074732.1;Name=WP_060074732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492515.1;locus_tag=LDO49_RS09515;product=ATP-binding protein;protein_id=WP_060074732.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 1739 2464 . - . ID=gene-LDO49_RS09520;Name=LDO49_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09520;old_locus_tag=BCEP4_1470004 NZ_CAJZAV010000054.1 Protein Homology CDS 1739 2464 . - 0 ID=cds-WP_021157221.1;Parent=gene-LDO49_RS09520;Dbxref=GenBank:WP_021157221.1;Name=WP_021157221.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523775.1;locus_tag=LDO49_RS09520;product=response regulator;protein_id=WP_021157221.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 2711 3457 . + . ID=gene-LDO49_RS09525;Name=LDO49_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09525;old_locus_tag=BCEP4_1470003 NZ_CAJZAV010000054.1 Protein Homology CDS 2711 3457 . + 0 ID=cds-WP_059590044.1;Parent=gene-LDO49_RS09525;Dbxref=GenBank:WP_059590044.1;Name=WP_059590044.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897364.1;locus_tag=LDO49_RS09525;product=MipA/OmpV family protein;protein_id=WP_059590044.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 3745 4080 . + . ID=gene-LDO49_RS09530;Name=LDO49_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09530;old_locus_tag=BCEP4_1470005 NZ_CAJZAV010000054.1 Protein Homology CDS 3745 4080 . + 0 ID=cds-WP_027787822.1;Parent=gene-LDO49_RS09530;Dbxref=GenBank:WP_027787822.1;Name=WP_027787822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492516.1;locus_tag=LDO49_RS09530;product=hypothetical protein;protein_id=WP_027787822.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 4103 5494 . - . ID=gene-LDO49_RS09535;Name=LDO49_RS09535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09535;old_locus_tag=BCEP4_1470006 NZ_CAJZAV010000054.1 Protein Homology CDS 4103 5494 . - 0 ID=cds-WP_060074731.1;Parent=gene-LDO49_RS09535;Dbxref=GenBank:WP_060074731.1;Name=WP_060074731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490611.1;locus_tag=LDO49_RS09535;product=hypothetical protein;protein_id=WP_060074731.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 5531 5794 . - . ID=gene-LDO49_RS09540;Name=LDO49_RS09540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09540;old_locus_tag=BCEP4_1470007 NZ_CAJZAV010000054.1 Protein Homology CDS 5531 5794 . - 0 ID=cds-WP_059486789.1;Parent=gene-LDO49_RS09540;Dbxref=GenBank:WP_059486789.1;Name=WP_059486789.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004550614.1;locus_tag=LDO49_RS09540;product=PAAR domain-containing protein;protein_id=WP_059486789.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 6278 9073 . + . ID=gene-LDO49_RS09545;Name=LDO49_RS09545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09545;old_locus_tag=BCEP4_1470009 NZ_CAJZAV010000054.1 Protein Homology CDS 6278 9073 . + 0 ID=cds-WP_060074730.1;Parent=gene-LDO49_RS09545;Dbxref=GenBank:WP_060074730.1;Name=WP_060074730.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004535452.1;locus_tag=LDO49_RS09545;product=type VI secretion system Vgr family protein;protein_id=WP_060074730.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 9076 9933 . + . ID=gene-LDO49_RS09550;Name=LDO49_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09550;old_locus_tag=BCEP4_1470010 NZ_CAJZAV010000054.1 Protein Homology CDS 9076 9933 . + 0 ID=cds-WP_060074729.1;Parent=gene-LDO49_RS09550;Dbxref=GenBank:WP_060074729.1;Name=WP_060074729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490520.1;locus_tag=LDO49_RS09550;product=DUF4123 domain-containing protein;protein_id=WP_060074729.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 10051 10650 . + . ID=gene-LDO49_RS09555;Name=LDO49_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09555;old_locus_tag=BCEP4_1470012 NZ_CAJZAV010000054.1 Protein Homology CDS 10051 10650 . + 0 ID=cds-WP_059497914.1;Parent=gene-LDO49_RS09555;Dbxref=GenBank:WP_059497914.1;Name=WP_059497914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897356.1;locus_tag=LDO49_RS09555;product=DUF3304 domain-containing protein;protein_id=WP_059497914.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 10647 13049 . + . ID=gene-LDO49_RS09560;Name=LDO49_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09560;old_locus_tag=BCEP4_1470011 NZ_CAJZAV010000054.1 Protein Homology CDS 10647 13049 . + 0 ID=cds-WP_224051685.1;Parent=gene-LDO49_RS09560;Dbxref=GenBank:WP_224051685.1;Name=WP_224051685.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497561.1;locus_tag=LDO49_RS09560;product=T6SS phospholipase effector Tle1-like catalytic domain-containing protein;protein_id=WP_224051685.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq pseudogene 13162 15654 . + . ID=gene-LDO49_RS09565;Name=LDO49_RS09565;end_range=15654,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS09565;old_locus_tag=BCEP4_1470013;partial=true;pseudo=true NZ_CAJZAV010000054.1 Protein Homology CDS 13162 15654 . + 0 ID=cds-LDO49_RS09565;Parent=gene-LDO49_RS09565;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0033103,GO:0033104;end_range=15654,.;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009930789.1;locus_tag=LDO49_RS09565;partial=true;product=type VI secretion system Vgr family protein;pseudo=true;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 17028 17900 . + . ID=gene-LDO49_RS09570;Name=LDO49_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09570;old_locus_tag=BCEP4_1470014 NZ_CAJZAV010000054.1 Protein Homology CDS 17028 17900 . + 0 ID=cds-WP_059855143.1;Parent=gene-LDO49_RS09570;Dbxref=GenBank:WP_059855143.1;Name=WP_059855143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897353.1;locus_tag=LDO49_RS09570;product=hypothetical protein;protein_id=WP_059855143.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 17971 20787 . + . ID=gene-LDO49_RS09575;Name=LDO49_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09575;old_locus_tag=BCEP4_1470015 NZ_CAJZAV010000054.1 Protein Homology CDS 17971 20787 . + 0 ID=cds-WP_060074727.1;Parent=gene-LDO49_RS09575;Dbxref=GenBank:WP_060074727.1;Name=WP_060074727.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490576.1;locus_tag=LDO49_RS09575;product=type VI secretion system Vgr family protein;protein_id=WP_060074727.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 20793 21683 . + . ID=gene-LDO49_RS09580;Name=LDO49_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09580;old_locus_tag=BCEP4_1470016 NZ_CAJZAV010000054.1 Protein Homology CDS 20793 21683 . + 0 ID=cds-WP_224051687.1;Parent=gene-LDO49_RS09580;Dbxref=GenBank:WP_224051687.1;Name=WP_224051687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492519.1;locus_tag=LDO49_RS09580;product=DUF4123 domain-containing protein;protein_id=WP_224051687.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 21680 22066 . + . ID=gene-LDO49_RS09585;Name=LDO49_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09585;old_locus_tag=BCEP4_1470017 NZ_CAJZAV010000054.1 Protein Homology CDS 21680 22066 . + 0 ID=cds-WP_124475679.1;Parent=gene-LDO49_RS09585;Dbxref=GenBank:WP_124475679.1;Name=WP_124475679.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897348.1;locus_tag=LDO49_RS09585;product=DUF805 domain-containing protein;protein_id=WP_124475679.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 22063 22542 . + . ID=gene-LDO49_RS09590;Name=LDO49_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09590;old_locus_tag=BCEP4_1470018 NZ_CAJZAV010000054.1 Protein Homology CDS 22063 22542 . + 0 ID=cds-WP_042973214.1;Parent=gene-LDO49_RS09590;Dbxref=GenBank:WP_042973214.1;Name=WP_042973214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897347.1;locus_tag=LDO49_RS09590;product=DUF3304 domain-containing protein;protein_id=WP_042973214.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 22548 24671 . + . ID=gene-LDO49_RS09595;Name=LDO49_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09595;old_locus_tag=BCEP4_1470019 NZ_CAJZAV010000054.1 Protein Homology CDS 22548 24671 . + 0 ID=cds-WP_124475680.1;Parent=gene-LDO49_RS09595;Dbxref=GenBank:WP_124475680.1;Name=WP_124475680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497554.1;locus_tag=LDO49_RS09595;product=phospholipase effector Tle1 domain-containing protein;protein_id=WP_124475680.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 24723 25961 . - . ID=gene-LDO49_RS09600;Name=LDO49_RS09600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09600;old_locus_tag=BCEP4_1470021 NZ_CAJZAV010000054.1 Protein Homology CDS 24723 25961 . - 0 ID=cds-WP_104768467.1;Parent=gene-LDO49_RS09600;Dbxref=GenBank:WP_104768467.1;Name=WP_104768467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490616.1;locus_tag=LDO49_RS09600;product=lytic transglycosylase domain-containing protein;protein_id=WP_104768467.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 26199 26375 . - . ID=gene-LDO49_RS09605;Name=LDO49_RS09605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09605 NZ_CAJZAV010000054.1 GeneMarkS-2+ CDS 26199 26375 . - 0 ID=cds-WP_155631552.1;Parent=gene-LDO49_RS09605;Dbxref=GenBank:WP_155631552.1;Name=WP_155631552.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS09605;product=hypothetical protein;protein_id=WP_155631552.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 26375 27535 . - . ID=gene-LDO49_RS09610;Name=LDO49_RS09610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09610;old_locus_tag=BCEP4_1470022 NZ_CAJZAV010000054.1 Protein Homology CDS 26375 27535 . - 0 ID=cds-WP_048025892.1;Parent=gene-LDO49_RS09610;Dbxref=GenBank:WP_048025892.1;Name=WP_048025892.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884367.1;locus_tag=LDO49_RS09610;product=porin;protein_id=WP_048025892.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 28009 28518 . + . ID=gene-LDO49_RS09615;Name=LDO49_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09615;old_locus_tag=BCEP4_1470024 NZ_CAJZAV010000054.1 Protein Homology CDS 28009 28518 . + 0 ID=cds-WP_048025893.1;Parent=gene-LDO49_RS09615;Dbxref=GenBank:WP_048025893.1;Name=WP_048025893.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108899.1;locus_tag=LDO49_RS09615;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_048025893.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 28522 29508 . + . ID=gene-LDO49_RS09620;Name=LDO49_RS09620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09620;old_locus_tag=BCEP4_1470025 NZ_CAJZAV010000054.1 Protein Homology CDS 28522 29508 . + 0 ID=cds-WP_224051688.1;Parent=gene-LDO49_RS09620;Dbxref=GenBank:WP_224051688.1;Name=WP_224051688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213615.1;locus_tag=LDO49_RS09620;product=FecR domain-containing protein;protein_id=WP_224051688.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 29563 32139 . + . ID=gene-LDO49_RS09625;Name=LDO49_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09625;old_locus_tag=BCEP4_1470026 NZ_CAJZAV010000054.1 Protein Homology CDS 29563 32139 . + 0 ID=cds-WP_224051689.1;Parent=gene-LDO49_RS09625;Dbxref=GenBank:WP_224051689.1;Name=WP_224051689.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410525.1;locus_tag=LDO49_RS09625;product=TonB-dependent siderophore receptor;protein_id=WP_224051689.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 32195 32992 . + . ID=gene-LDO49_RS09630;Name=LDO49_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09630;old_locus_tag=BCEP4_1470027 NZ_CAJZAV010000054.1 Protein Homology CDS 32195 32992 . + 0 ID=cds-WP_443797933.1;Parent=gene-LDO49_RS09630;Dbxref=GenBank:WP_443797933.1;Name=WP_443797933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351671.1;locus_tag=LDO49_RS09630;product=hypothetical protein;protein_id=WP_443797933.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 33008 33898 . - . ID=gene-LDO49_RS09635;Name=LDO49_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09635;old_locus_tag=BCEP4_1470028 NZ_CAJZAV010000054.1 Protein Homology CDS 33008 33898 . - 0 ID=cds-WP_224051691.1;Parent=gene-LDO49_RS09635;Dbxref=GenBank:WP_224051691.1;Name=WP_224051691.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476277.1;locus_tag=LDO49_RS09635;product=LysR family transcriptional regulator;protein_id=WP_224051691.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 34011 34436 . + . ID=gene-LDO49_RS09640;Name=LDO49_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09640;old_locus_tag=BCEP4_1470029 NZ_CAJZAV010000054.1 Protein Homology CDS 34011 34436 . + 0 ID=cds-WP_021163061.1;Parent=gene-LDO49_RS09640;Dbxref=GenBank:WP_021163061.1;Name=WP_021163061.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002553320.1;locus_tag=LDO49_RS09640;product=VOC family protein;protein_id=WP_021163061.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 34577 35161 . + . ID=gene-LDO49_RS09645;Name=LDO49_RS09645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09645;old_locus_tag=BCEP4_1470030 NZ_CAJZAV010000054.1 Protein Homology CDS 34577 35161 . + 0 ID=cds-WP_021163062.1;Parent=gene-LDO49_RS09645;Dbxref=GenBank:WP_021163062.1;Name=WP_021163062.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481567.1;locus_tag=LDO49_RS09645;product=flavin reductase family protein;protein_id=WP_021163062.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 35213 36109 . - . ID=gene-LDO49_RS09650;Name=LDO49_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09650;old_locus_tag=BCEP4_1470031 NZ_CAJZAV010000054.1 Protein Homology CDS 35213 36109 . - 0 ID=cds-WP_124842419.1;Parent=gene-LDO49_RS09650;Dbxref=GenBank:WP_124842419.1;Name=WP_124842419.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757181.1;locus_tag=LDO49_RS09650;product=LysR family transcriptional regulator;protein_id=WP_124842419.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 36207 37505 . + . ID=gene-LDO49_RS09655;Name=LDO49_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09655;old_locus_tag=BCEP4_1470033 NZ_CAJZAV010000054.1 Protein Homology CDS 36207 37505 . + 0 ID=cds-WP_059620659.1;Parent=gene-LDO49_RS09655;Dbxref=GenBank:WP_059620659.1;Name=WP_059620659.1;Ontology_term=GO:0046942,GO:1905039,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=carboxylic acid transport|0046942||IEA,carboxylic acid transmembrane transport|1905039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476273.1;locus_tag=LDO49_RS09655;product=CitMHS family transporter;protein_id=WP_059620659.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 37548 38906 . + . ID=gene-LDO49_RS09660;Name=LDO49_RS09660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09660;old_locus_tag=BCEP4_1470034 NZ_CAJZAV010000054.1 Protein Homology CDS 37548 38906 . + 0 ID=cds-WP_224051698.1;Parent=gene-LDO49_RS09660;Dbxref=GenBank:WP_224051698.1;Name=WP_224051698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897336.1;locus_tag=LDO49_RS09660;product=acyclic terpene utilization AtuA family protein;protein_id=WP_224051698.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 38906 39217 . + . ID=gene-LDO49_RS09665;Name=LDO49_RS09665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09665;old_locus_tag=BCEP4_1470035 NZ_CAJZAV010000054.1 Protein Homology CDS 38906 39217 . + 0 ID=cds-WP_224051692.1;Parent=gene-LDO49_RS09665;Dbxref=GenBank:WP_224051692.1;Name=WP_224051692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351678.1;locus_tag=LDO49_RS09665;product=AtuA-related protein;protein_id=WP_224051692.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 39267 40088 . - . ID=gene-LDO49_RS09670;Name=LDO49_RS09670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09670;old_locus_tag=BCEP4_1470036 NZ_CAJZAV010000054.1 Protein Homology CDS 39267 40088 . - 0 ID=cds-WP_060051748.1;Parent=gene-LDO49_RS09670;Dbxref=GenBank:WP_060051748.1;Name=WP_060051748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497541.1;locus_tag=LDO49_RS09670;product=carbon-nitrogen hydrolase family protein;protein_id=WP_060051748.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 40362 42191 . + . ID=gene-LDO49_RS09675;Name=LDO49_RS09675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09675;old_locus_tag=BCEP4_1470037 NZ_CAJZAV010000054.1 Protein Homology CDS 40362 42191 . + 0 ID=cds-WP_224051693.1;Parent=gene-LDO49_RS09675;Dbxref=GenBank:WP_224051693.1;Name=WP_224051693.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757186.1;locus_tag=LDO49_RS09675;product=methyl-accepting chemotaxis protein;protein_id=WP_224051693.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 42263 43054 . - . ID=gene-LDO49_RS09680;Name=LDO49_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09680;old_locus_tag=BCEP4_1470038 NZ_CAJZAV010000054.1 Protein Homology CDS 42263 43054 . - 0 ID=cds-WP_059590057.1;Parent=gene-LDO49_RS09680;Dbxref=GenBank:WP_059590057.1;Name=WP_059590057.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481853.1;locus_tag=LDO49_RS09680;product=response regulator transcription factor;protein_id=WP_059590057.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 43274 45625 . + . ID=gene-LDO49_RS09685;Name=LDO49_RS09685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09685;old_locus_tag=BCEP4_1470039 NZ_CAJZAV010000054.1 GeneMarkS-2+ CDS 43274 45625 . + 0 ID=cds-WP_224051694.1;Parent=gene-LDO49_RS09685;Dbxref=GenBank:WP_224051694.1;Name=WP_224051694.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS09685;product=hypothetical protein;protein_id=WP_224051694.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 45622 46842 . + . ID=gene-LDO49_RS09690;Name=LDO49_RS09690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09690;old_locus_tag=BCEP4_1470040 NZ_CAJZAV010000054.1 Protein Homology CDS 45622 46842 . + 0 ID=cds-WP_224051695.1;Parent=gene-LDO49_RS09690;Dbxref=GenBank:WP_224051695.1;Name=WP_224051695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006163566.1;locus_tag=LDO49_RS09690;product=PcfJ domain-containing protein;protein_id=WP_224051695.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 46856 47527 . + . ID=gene-LDO49_RS09695;Name=LDO49_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09695;old_locus_tag=BCEP4_1470041 NZ_CAJZAV010000054.1 Protein Homology CDS 46856 47527 . + 0 ID=cds-WP_059590159.1;Parent=gene-LDO49_RS09695;Dbxref=GenBank:WP_059590159.1;Name=WP_059590159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006163565.1;locus_tag=LDO49_RS09695;product=DUF1266 domain-containing protein;protein_id=WP_059590159.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 47588 48394 . + . ID=gene-LDO49_RS09700;Name=LDO49_RS09700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09700;old_locus_tag=BCEP4_1470042 NZ_CAJZAV010000054.1 Protein Homology CDS 47588 48394 . + 0 ID=cds-WP_224051696.1;Parent=gene-LDO49_RS09700;Dbxref=GenBank:WP_224051696.1;Name=WP_224051696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481846.1;locus_tag=LDO49_RS09700;product=topoisomerase IV;protein_id=WP_224051696.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 48437 49366 . - . ID=gene-LDO49_RS09705;Name=LDO49_RS09705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09705;old_locus_tag=BCEP4_1470043 NZ_CAJZAV010000054.1 Protein Homology CDS 48437 49366 . - 0 ID=cds-WP_059526992.1;Parent=gene-LDO49_RS09705;Dbxref=GenBank:WP_059526992.1;Name=WP_059526992.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332728.1;locus_tag=LDO49_RS09705;product=phosphatidate cytidylyltransferase;protein_id=WP_059526992.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 49405 50037 . - . ID=gene-LDO49_RS09710;Name=LDO49_RS09710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09710;old_locus_tag=BCEP4_1470044 NZ_CAJZAV010000054.1 Protein Homology CDS 49405 50037 . - 0 ID=cds-WP_021163072.1;Parent=gene-LDO49_RS09710;Dbxref=GenBank:WP_021163072.1;Name=WP_021163072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481857.1;locus_tag=LDO49_RS09710;product=lysophospholipid acyltransferase family protein;protein_id=WP_021163072.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 50272 50403 . + . ID=gene-LDO49_RS37285;Name=LDO49_RS37285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37285 NZ_CAJZAV010000054.1 GeneMarkS-2+ CDS 50272 50403 . + 0 ID=cds-WP_021163073.1;Parent=gene-LDO49_RS37285;Dbxref=GenBank:WP_021163073.1;Name=WP_021163073.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37285;product=hypothetical protein;protein_id=WP_021163073.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 50504 51115 . + . ID=gene-LDO49_RS09715;Name=LDO49_RS09715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09715;old_locus_tag=BCEP4_1470046 NZ_CAJZAV010000054.1 Protein Homology CDS 50504 51115 . + 0 ID=cds-WP_021163074.1;Parent=gene-LDO49_RS09715;Dbxref=GenBank:WP_021163074.1;Name=WP_021163074.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012352982.1;locus_tag=LDO49_RS09715;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_021163074.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq gene 51189 52958 . + . ID=gene-LDO49_RS09720;Name=LDO49_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09720;old_locus_tag=BCEP4_1470047 NZ_CAJZAV010000054.1 Protein Homology CDS 51189 52958 . + 0 ID=cds-WP_224051697.1;Parent=gene-LDO49_RS09720;Dbxref=GenBank:WP_224051697.1;Name=WP_224051697.1;Ontology_term=GO:0008168,GO:0016787,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,hydrolase activity|0016787||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351686.1;locus_tag=LDO49_RS09720;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;protein_id=WP_224051697.1;transl_table=11 NZ_CAJZAV010000054.1 RefSeq pseudogene 52955 53479 . + . ID=gene-LDO49_RS09725;Name=LDO49_RS09725;end_range=53479,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS09725;partial=true;pseudo=true NZ_CAJZAV010000054.1 Protein Homology CDS 52955 53479 . + 0 ID=cds-LDO49_RS09725;Parent=gene-LDO49_RS09725;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=53479,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757192.1;locus_tag=LDO49_RS09725;partial=true;product=serine/threonine protein phosphatase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000055.1 1 10410 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000055.1 RefSeq region 1 10410 . + . ID=NZ_CAJZAV010000055.1:1..10410;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_148 NZ_CAJZAV010000055.1 RefSeq gene 1 307 . + . ID=gene-LDO49_RS09730;Name=LDO49_RS09730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09730;old_locus_tag=BCEP4_1480001;partial=true;start_range=.,1 NZ_CAJZAV010000055.1 Protein Homology CDS 1 307 . + 1 ID=cds-WP_224051699.1;Parent=gene-LDO49_RS09730;Dbxref=GenBank:WP_224051699.1;Name=WP_224051699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404154.1;locus_tag=LDO49_RS09730;partial=true;product=thiamine phosphate synthase;protein_id=WP_224051699.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000055.1 RefSeq gene 378 2030 . - . ID=gene-LDO49_RS09735;Name=LDO49_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09735;old_locus_tag=BCEP4_1480002 NZ_CAJZAV010000055.1 Protein Homology CDS 378 2030 . - 0 ID=cds-WP_042972659.1;Parent=gene-LDO49_RS09735;Dbxref=GenBank:WP_042972659.1;Name=WP_042972659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548173.1;locus_tag=LDO49_RS09735;product=DUF3459 domain-containing protein;protein_id=WP_042972659.1;transl_table=11 NZ_CAJZAV010000055.1 RefSeq gene 2336 3043 . + . ID=gene-LDO49_RS09740;Name=LDO49_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09740;old_locus_tag=BCEP4_1480003 NZ_CAJZAV010000055.1 Protein Homology CDS 2336 3043 . + 0 ID=cds-WP_048022266.1;Parent=gene-LDO49_RS09740;Dbxref=GenBank:WP_048022266.1;Name=WP_048022266.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497276.1;locus_tag=LDO49_RS09740;product=class I SAM-dependent methyltransferase;protein_id=WP_048022266.1;transl_table=11 NZ_CAJZAV010000055.1 RefSeq gene 3169 3837 . + . ID=gene-LDO49_RS09745;Name=LDO49_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09745;old_locus_tag=BCEP4_1480004 NZ_CAJZAV010000055.1 Protein Homology CDS 3169 3837 . + 0 ID=cds-WP_060071360.1;Parent=gene-LDO49_RS09745;Dbxref=GenBank:WP_060071360.1;Name=WP_060071360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754058.1;locus_tag=LDO49_RS09745;product=glutathione S-transferase;protein_id=WP_060071360.1;transl_table=11 NZ_CAJZAV010000055.1 RefSeq gene 3862 4515 . - . ID=gene-LDO49_RS09750;Name=LDO49_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09750;old_locus_tag=BCEP4_1480005 NZ_CAJZAV010000055.1 Protein Homology CDS 3862 4515 . - 0 ID=cds-WP_021156306.1;Parent=gene-LDO49_RS09750;Dbxref=GenBank:WP_021156306.1;Name=WP_021156306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603248.1;locus_tag=LDO49_RS09750;product=DUF1345 domain-containing protein;protein_id=WP_021156306.1;transl_table=11 NZ_CAJZAV010000055.1 RefSeq gene 4654 5385 . + . ID=gene-LDO49_RS09755;Name=LDO49_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09755;old_locus_tag=BCEP4_1480006 NZ_CAJZAV010000055.1 Protein Homology CDS 4654 5385 . + 0 ID=cds-WP_042972649.1;Parent=gene-LDO49_RS09755;Dbxref=GenBank:WP_042972649.1;Name=WP_042972649.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548177.1;locus_tag=LDO49_RS09755;product=metallophosphoesterase;protein_id=WP_042972649.1;transl_table=11 NZ_CAJZAV010000055.1 RefSeq gene 5410 6105 . - . ID=gene-LDO49_RS09760;Name=LDO49_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09760;old_locus_tag=BCEP4_1480007 NZ_CAJZAV010000055.1 Protein Homology CDS 5410 6105 . - 0 ID=cds-WP_042972650.1;Parent=gene-LDO49_RS09760;Dbxref=GenBank:WP_042972650.1;Name=WP_042972650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660474.1;locus_tag=LDO49_RS09760;product=RES family NAD+ phosphorylase;protein_id=WP_042972650.1;transl_table=11 NZ_CAJZAV010000055.1 RefSeq gene 6108 6527 . - . ID=gene-LDO49_RS09765;Name=LDO49_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09765;old_locus_tag=BCEP4_1480008 NZ_CAJZAV010000055.1 Protein Homology CDS 6108 6527 . - 0 ID=cds-WP_042972651.1;Parent=gene-LDO49_RS09765;Dbxref=GenBank:WP_042972651.1;Name=WP_042972651.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009895626.1;locus_tag=LDO49_RS09765;product=MbcA/ParS/Xre antitoxin family protein;protein_id=WP_042972651.1;transl_table=11 NZ_CAJZAV010000055.1 RefSeq gene 6761 7543 . + . ID=gene-LDO49_RS09770;Name=LDO49_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09770;old_locus_tag=BCEP4_1480009 NZ_CAJZAV010000055.1 Protein Homology CDS 6761 7543 . + 0 ID=cds-WP_021156310.1;Parent=gene-LDO49_RS09770;Dbxref=GenBank:WP_021156310.1;Name=WP_021156310.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090202.1;locus_tag=LDO49_RS09770;product=ABC transporter substrate-binding protein;protein_id=WP_021156310.1;transl_table=11 NZ_CAJZAV010000055.1 RefSeq gene 8675 9061 . + . ID=gene-LDO49_RS09775;Name=LDO49_RS09775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09775;old_locus_tag=BCEP4_1480011 NZ_CAJZAV010000055.1 Protein Homology CDS 8675 9061 . + 0 ID=cds-WP_021156312.1;Parent=gene-LDO49_RS09775;Dbxref=GenBank:WP_021156312.1;Name=WP_021156312.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548182.1;locus_tag=LDO49_RS09775;product=GtrA family protein;protein_id=WP_021156312.1;transl_table=11 NZ_CAJZAV010000055.1 RefSeq gene 9090 10043 . - . ID=gene-LDO49_RS09780;Name=LDO49_RS09780;end_range=10043,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09780;old_locus_tag=BCEP4_1480012;partial=true NZ_CAJZAV010000055.1 Protein Homology CDS 9090 10043 . - 0 ID=cds-WP_443797934.1;Parent=gene-LDO49_RS09780;Dbxref=GenBank:WP_443797934.1;Name=WP_443797934.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;end_range=10043,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754051.1;locus_tag=LDO49_RS09780;partial=true;product=sigma-54 interaction domain-containing protein;protein_id=WP_443797934.1;transl_table=11 NZ_CAJZAV010000055.1 RefSeq gene 10054 10410 . - . ID=gene-LDO49_RS37920;Name=LDO49_RS37920;end_range=10410,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37920;old_locus_tag=BCEP4_1480013;partial=true;start_range=.,10054 NZ_CAJZAV010000055.1 Protein Homology CDS 10054 10410 . - 0 ID=cds-WP_443797935.1;Parent=gene-LDO49_RS37920;Dbxref=GenBank:WP_443797935.1;Name=WP_443797935.1;end_range=10410,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754051.1;locus_tag=LDO49_RS37920;partial=true;product=VpsR-related response regulator;protein_id=WP_443797935.1;start_range=.,10054;transl_table=11 ##sequence-region NZ_CAJZAV010000056.1 1 24516 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000056.1 RefSeq region 1 24516 . + . ID=NZ_CAJZAV010000056.1:1..24516;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_149 NZ_CAJZAV010000056.1 RefSeq gene 1 657 . + . ID=gene-LDO49_RS09785;Name=LDO49_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09785;partial=true;start_range=.,1 NZ_CAJZAV010000056.1 Protein Homology CDS 1 657 . + 0 ID=cds-WP_224051700.1;Parent=gene-LDO49_RS09785;Dbxref=GenBank:WP_224051700.1;Name=WP_224051700.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029679.1;locus_tag=LDO49_RS09785;partial=true;product=porin;protein_id=WP_224051700.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 702 2165 . + . ID=gene-LDO49_RS09790;Name=LDO49_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09790;old_locus_tag=BCEP4_1490002 NZ_CAJZAV010000056.1 Protein Homology CDS 702 2165 . + 0 ID=cds-WP_224051701.1;Parent=gene-LDO49_RS09790;Dbxref=GenBank:WP_224051701.1;Name=WP_224051701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529380.1;locus_tag=LDO49_RS09790;product=MmgE/PrpD family protein;protein_id=WP_224051701.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 2182 3111 . - . ID=gene-LDO49_RS09795;Name=LDO49_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09795;old_locus_tag=BCEP4_1490004 NZ_CAJZAV010000056.1 Protein Homology CDS 2182 3111 . - 0 ID=cds-WP_048027736.1;Parent=gene-LDO49_RS09795;Dbxref=GenBank:WP_048027736.1;Name=WP_048027736.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029136.1;locus_tag=LDO49_RS09795;product=LysR family transcriptional regulator;protein_id=WP_048027736.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 3404 4423 . - . ID=gene-LDO49_RS09800;Name=LDO49_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09800;old_locus_tag=BCEP4_1490005 NZ_CAJZAV010000056.1 Protein Homology CDS 3404 4423 . - 0 ID=cds-WP_048027303.1;Parent=gene-LDO49_RS09800;Dbxref=GenBank:WP_048027303.1;Name=WP_048027303.1;Ontology_term=GO:0019441,GO:0004061;gbkey=CDS;go_function=arylformamidase activity|0004061||IEA;go_process=L-tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330753.1;locus_tag=LDO49_RS09800;product=cyclase family protein;protein_id=WP_048027303.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq pseudogene 4648 5181 . - . ID=gene-LDO49_RS09805;Name=imuA;gbkey=Gene;gene=imuA;gene_biotype=pseudogene;locus_tag=LDO49_RS09805;old_locus_tag=BCEP4_1490006;partial=true;pseudo=true;start_range=.,4648 NZ_CAJZAV010000056.1 Protein Homology CDS 4648 5181 . - 0 ID=cds-LDO49_RS09805;Parent=gene-LDO49_RS09805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009432,GO:0051782;gbkey=CDS;gene=imuA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195290.1;locus_tag=LDO49_RS09805;partial=true;product=translesion DNA synthesis-associated protein ImuA;pseudo=true;start_range=.,4648;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 5517 6311 . - . ID=gene-LDO49_RS09810;Name=LDO49_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09810;old_locus_tag=BCEP4_1490007 NZ_CAJZAV010000056.1 Protein Homology CDS 5517 6311 . - 0 ID=cds-WP_021163153.1;Parent=gene-LDO49_RS09810;Dbxref=GenBank:WP_021163153.1;Name=WP_021163153.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895978.1;locus_tag=LDO49_RS09810;product=ABC transporter ATP-binding protein;protein_id=WP_021163153.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 6313 7209 . - . ID=gene-LDO49_RS09815;Name=LDO49_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09815;old_locus_tag=BCEP4_1490008 NZ_CAJZAV010000056.1 Protein Homology CDS 6313 7209 . - 0 ID=cds-WP_021163152.1;Parent=gene-LDO49_RS09815;Dbxref=GenBank:WP_021163152.1;Name=WP_021163152.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893130.1;locus_tag=LDO49_RS09815;product=ABC transporter permease;protein_id=WP_021163152.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 7349 8314 . - . ID=gene-LDO49_RS09820;Name=LDO49_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09820;old_locus_tag=BCEP4_1490009 NZ_CAJZAV010000056.1 Protein Homology CDS 7349 8314 . - 0 ID=cds-WP_059498612.1;Parent=gene-LDO49_RS09820;Dbxref=GenBank:WP_059498612.1;Name=WP_059498612.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202953.1;locus_tag=LDO49_RS09820;product=ABC transporter substrate-binding protein;protein_id=WP_059498612.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 8647 8955 . + . ID=gene-LDO49_RS09825;Name=LDO49_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09825;old_locus_tag=BCEP4_1490010 NZ_CAJZAV010000056.1 Protein Homology CDS 8647 8955 . + 0 ID=cds-WP_048025687.1;Parent=gene-LDO49_RS09825;Dbxref=GenBank:WP_048025687.1;Name=WP_048025687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760740.1;locus_tag=LDO49_RS09825;product=VF_A0006 family four-cysteine protein;protein_id=WP_048025687.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 9064 9879 . - . ID=gene-LDO49_RS09830;Name=LDO49_RS09830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09830;old_locus_tag=BCEP4_1490011 NZ_CAJZAV010000056.1 Protein Homology CDS 9064 9879 . - 0 ID=cds-WP_048025688.1;Parent=gene-LDO49_RS09830;Dbxref=GenBank:WP_048025688.1;Name=WP_048025688.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334303.1;locus_tag=LDO49_RS09830;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_048025688.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 10084 11721 . - . ID=gene-LDO49_RS09835;Name=LDO49_RS09835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09835;old_locus_tag=BCEP4_1490013 NZ_CAJZAV010000056.1 Protein Homology CDS 10084 11721 . - 0 ID=cds-WP_060073194.1;Parent=gene-LDO49_RS09835;Dbxref=GenBank:WP_060073194.1;Name=WP_060073194.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329262.1;locus_tag=LDO49_RS09835;product=methyl-accepting chemotaxis protein;protein_id=WP_060073194.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 11947 12237 . + . ID=gene-LDO49_RS09840;Name=LDO49_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09840;old_locus_tag=BCEP4_1490012 NZ_CAJZAV010000056.1 Protein Homology CDS 11947 12237 . + 0 ID=cds-WP_059498613.1;Parent=gene-LDO49_RS09840;Dbxref=GenBank:WP_059498613.1;Name=WP_059498613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329263.1;locus_tag=LDO49_RS09840;product=YciI family protein;protein_id=WP_059498613.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 12382 12999 . - . ID=gene-LDO49_RS09845;Name=LDO49_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09845;old_locus_tag=BCEP4_1490014 NZ_CAJZAV010000056.1 Protein Homology CDS 12382 12999 . - 0 ID=cds-WP_042978155.1;Parent=gene-LDO49_RS09845;Dbxref=GenBank:WP_042978155.1;Name=WP_042978155.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009972812.1;locus_tag=LDO49_RS09845;product=SCO family protein;protein_id=WP_042978155.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 13018 13920 . - . ID=gene-LDO49_RS09850;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=LDO49_RS09850;old_locus_tag=BCEP4_1490015 NZ_CAJZAV010000056.1 Protein Homology CDS 13018 13920 . - 0 ID=cds-WP_006477738.1;Parent=gene-LDO49_RS09850;Dbxref=GenBank:WP_006477738.1;Name=WP_006477738.1;Ontology_term=GO:0006783,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543880.1;locus_tag=LDO49_RS09850;product=heme o synthase;protein_id=WP_006477738.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 13929 15041 . - . ID=gene-LDO49_RS09855;Name=LDO49_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09855;old_locus_tag=BCEP4_1490016 NZ_CAJZAV010000056.1 Protein Homology CDS 13929 15041 . - 0 ID=cds-WP_021163752.1;Parent=gene-LDO49_RS09855;Dbxref=GenBank:WP_021163752.1;Name=WP_021163752.1;Ontology_term=GO:0006783,GO:0017004,GO:0016491,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=heme biosynthetic process|0006783||IEA,cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895968.1;locus_tag=LDO49_RS09855;product=COX15/CtaA family protein;protein_id=WP_021163752.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 15066 15692 . - . ID=gene-LDO49_RS09860;Name=LDO49_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09860;old_locus_tag=BCEP4_1490017 NZ_CAJZAV010000056.1 Protein Homology CDS 15066 15692 . - 0 ID=cds-WP_042978154.1;Parent=gene-LDO49_RS09860;Dbxref=GenBank:WP_042978154.1;Name=WP_042978154.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658000.1;locus_tag=LDO49_RS09860;product=SCO family protein;protein_id=WP_042978154.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 15753 16463 . - . ID=gene-LDO49_RS09865;Name=LDO49_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09865;old_locus_tag=BCEP4_1490019 NZ_CAJZAV010000056.1 Protein Homology CDS 15753 16463 . - 0 ID=cds-WP_042978157.1;Parent=gene-LDO49_RS09865;Dbxref=GenBank:WP_042978157.1;Name=WP_042978157.1;Ontology_term=GO:0033617,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=mitochondrial cytochrome c oxidase assembly|0033617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763331.1;locus_tag=LDO49_RS09865;product=SURF1 family protein;protein_id=WP_042978157.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 16548 16757 . + . ID=gene-LDO49_RS09870;Name=LDO49_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09870;old_locus_tag=BCEP4_1490018 NZ_CAJZAV010000056.1 Protein Homology CDS 16548 16757 . + 0 ID=cds-WP_011353273.1;Parent=gene-LDO49_RS09870;Dbxref=GenBank:WP_011353273.1;Name=WP_011353273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334311.1;locus_tag=LDO49_RS09870;product=twin transmembrane helix small protein;protein_id=WP_011353273.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 16932 17789 . - . ID=gene-LDO49_RS09875;Name=LDO49_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09875;old_locus_tag=BCEP4_1490020 NZ_CAJZAV010000056.1 Protein Homology CDS 16932 17789 . - 0 ID=cds-WP_021163749.1;Parent=gene-LDO49_RS09875;Dbxref=GenBank:WP_021163749.1;Name=WP_021163749.1;Ontology_term=GO:0009060,GO:0019646,GO:0004129,GO:0009055;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA,electron transfer activity|0009055||IEA;go_process=aerobic respiration|0009060||IEA,aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013587015.1;locus_tag=LDO49_RS09875;product=cytochrome c oxidase subunit 3;protein_id=WP_021163749.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 17956 18156 . - . ID=gene-LDO49_RS09880;Name=LDO49_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09880;old_locus_tag=BCEP4_1490021 NZ_CAJZAV010000056.1 Protein Homology CDS 17956 18156 . - 0 ID=cds-WP_021163748.1;Parent=gene-LDO49_RS09880;Dbxref=GenBank:WP_021163748.1;Name=WP_021163748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398201.1;locus_tag=LDO49_RS09880;product=DUF2970 domain-containing protein;protein_id=WP_021163748.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 18173 18781 . - . ID=gene-LDO49_RS09885;Name=LDO49_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09885;old_locus_tag=BCEP4_1490022 NZ_CAJZAV010000056.1 Protein Homology CDS 18173 18781 . - 0 ID=cds-WP_011353276.1;Parent=gene-LDO49_RS09885;Dbxref=GenBank:WP_011353276.1;Name=WP_011353276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024429.1;locus_tag=LDO49_RS09885;product=cytochrome c oxidase assembly protein;protein_id=WP_011353276.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 18817 18957 . - . ID=gene-LDO49_RS09890;Name=LDO49_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09890;old_locus_tag=BCEP4_1490023 NZ_CAJZAV010000056.1 Protein Homology CDS 18817 18957 . - 0 ID=cds-WP_027789063.1;Parent=gene-LDO49_RS09890;Dbxref=GenBank:WP_027789063.1;Name=WP_027789063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486385.1;locus_tag=LDO49_RS09890;product=cytochrome oxidase small assembly protein;protein_id=WP_027789063.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 19038 20645 . - . ID=gene-LDO49_RS09895;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=LDO49_RS09895;old_locus_tag=BCEP4_1490024 NZ_CAJZAV010000056.1 Protein Homology CDS 19038 20645 . - 0 ID=cds-WP_021163746.1;Parent=gene-LDO49_RS09895;Dbxref=GenBank:WP_021163746.1;Name=WP_021163746.1;Ontology_term=GO:0015990,GO:0004129;gbkey=CDS;gene=ctaD;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090602.1;locus_tag=LDO49_RS09895;product=cytochrome c oxidase subunit I;protein_id=WP_021163746.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 20689 22287 . - . ID=gene-LDO49_RS09900;Name=coxB;gbkey=Gene;gene=coxB;gene_biotype=protein_coding;locus_tag=LDO49_RS09900;old_locus_tag=BCEP4_1490025 NZ_CAJZAV010000056.1 Protein Homology CDS 20689 22287 . - 0 ID=cds-WP_059489832.1;Parent=gene-LDO49_RS09900;Dbxref=GenBank:WP_059489832.1;Name=WP_059489832.1;Ontology_term=GO:0004129,GO:0016020;gbkey=CDS;gene=coxB;go_component=membrane|0016020||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398197.1;locus_tag=LDO49_RS09900;product=cytochrome c oxidase subunit II;protein_id=WP_059489832.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 22345 22869 . - . ID=gene-LDO49_RS09905;Name=LDO49_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09905;old_locus_tag=BCEP4_1490026 NZ_CAJZAV010000056.1 Protein Homology CDS 22345 22869 . - 0 ID=cds-WP_021163744.1;Parent=gene-LDO49_RS09905;Dbxref=GenBank:WP_021163744.1;Name=WP_021163744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486400.1;locus_tag=LDO49_RS09905;product=DUF2244 domain-containing protein;protein_id=WP_021163744.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq gene 23065 24030 . - . ID=gene-LDO49_RS09910;Name=LDO49_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09910;old_locus_tag=BCEP4_1490027 NZ_CAJZAV010000056.1 Protein Homology CDS 23065 24030 . - 0 ID=cds-WP_042978153.1;Parent=gene-LDO49_RS09910;Dbxref=GenBank:WP_042978153.1;Name=WP_042978153.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762484.1;locus_tag=LDO49_RS09910;product=methyltransferase domain-containing protein;protein_id=WP_042978153.1;transl_table=11 NZ_CAJZAV010000056.1 RefSeq pseudogene 24195 24516 . + . ID=gene-LDO49_RS09915;Name=LDO49_RS09915;end_range=24516,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS09915;partial=true;pseudo=true;start_range=.,24195 NZ_CAJZAV010000056.1 Protein Homology CDS 24195 24516 . + 1 ID=cds-LDO49_RS09915;Parent=gene-LDO49_RS09915;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=24516,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481563.1;locus_tag=LDO49_RS09915;partial=true;product=ComF family protein;pseudo=true;start_range=.,24195;transl_table=11 ##sequence-region NZ_CAJZAV010000057.1 1 67975 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000057.1 RefSeq region 1 67975 . + . ID=NZ_CAJZAV010000057.1:1..67975;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_15 NZ_CAJZAV010000057.1 RefSeq pseudogene 1 515 . + . ID=gene-LDO49_RS09920;Name=LDO49_RS09920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS09920;old_locus_tag=BCEP4_150001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000057.1 Protein Homology CDS 1 515 . + 2 ID=cds-LDO49_RS09920;Parent=gene-LDO49_RS09920;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495565.1;locus_tag=LDO49_RS09920;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 547 1230 . + . ID=gene-LDO49_RS09925;Name=LDO49_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09925;old_locus_tag=BCEP4_150002 NZ_CAJZAV010000057.1 Protein Homology CDS 547 1230 . + 0 ID=cds-WP_059494274.1;Parent=gene-LDO49_RS09925;Dbxref=GenBank:WP_059494274.1;Name=WP_059494274.1;Ontology_term=GO:0000287,GO:0005515,GO:0016835;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,protein binding|0005515||IEA,carbon-oxygen lyase activity|0016835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352437.1;locus_tag=LDO49_RS09925;product=Vgb family protein;protein_id=WP_059494274.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 1371 2366 . + . ID=gene-LDO49_RS09930;Name=LDO49_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09930;old_locus_tag=BCEP4_150003 NZ_CAJZAV010000057.1 Protein Homology CDS 1371 2366 . + 0 ID=cds-WP_060073010.1;Parent=gene-LDO49_RS09930;Dbxref=GenBank:WP_060073010.1;Name=WP_060073010.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549553.1;locus_tag=LDO49_RS09930;product=DMT family transporter;protein_id=WP_060073010.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 2421 2744 . - . ID=gene-LDO49_RS09935;Name=LDO49_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09935;old_locus_tag=BCEP4_150004 NZ_CAJZAV010000057.1 Protein Homology CDS 2421 2744 . - 0 ID=cds-WP_021159122.1;Parent=gene-LDO49_RS09935;Dbxref=GenBank:WP_021159122.1;Name=WP_021159122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764044.1;locus_tag=LDO49_RS09935;product=RnfH family protein;protein_id=WP_021159122.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 2749 3186 . - . ID=gene-LDO49_RS09940;Name=LDO49_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09940;old_locus_tag=BCEP4_150005 NZ_CAJZAV010000057.1 Protein Homology CDS 2749 3186 . - 0 ID=cds-WP_006478512.1;Parent=gene-LDO49_RS09940;Dbxref=GenBank:WP_006478512.1;Name=WP_006478512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904866.1;locus_tag=LDO49_RS09940;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_006478512.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 3286 3732 . + . ID=gene-LDO49_RS09945;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=LDO49_RS09945;old_locus_tag=BCEP4_150006 NZ_CAJZAV010000057.1 Protein Homology CDS 3286 3732 . + 0 ID=cds-WP_006478511.1;Parent=gene-LDO49_RS09945;Dbxref=GenBank:WP_006478511.1;Name=WP_006478511.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193190.1;locus_tag=LDO49_RS09945;product=SsrA-binding protein SmpB;protein_id=WP_006478511.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 3983 4918 . - . ID=gene-LDO49_RS09950;Name=LDO49_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09950;old_locus_tag=BCEP4_150008 NZ_CAJZAV010000057.1 Protein Homology CDS 3983 4918 . - 0 ID=cds-WP_014896750.1;Parent=gene-LDO49_RS09950;Dbxref=GenBank:WP_014896750.1;Name=WP_014896750.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352442.1;locus_tag=LDO49_RS09950;product=SPFH domain-containing protein;protein_id=WP_014896750.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 4952 5386 . - . ID=gene-LDO49_RS09955;Name=LDO49_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09955;old_locus_tag=BCEP4_150009 NZ_CAJZAV010000057.1 Protein Homology CDS 4952 5386 . - 0 ID=cds-WP_042974814.1;Parent=gene-LDO49_RS09955;Dbxref=GenBank:WP_042974814.1;Name=WP_042974814.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478509.1;locus_tag=LDO49_RS09955;product=NfeD family protein;protein_id=WP_042974814.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 5592 7994 . - . ID=gene-LDO49_RS09960;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=LDO49_RS09960;old_locus_tag=BCEP4_150010 NZ_CAJZAV010000057.1 Protein Homology CDS 5592 7994 . - 0 ID=cds-WP_060073008.1;Parent=gene-LDO49_RS09960;Dbxref=GenBank:WP_060073008.1;Name=WP_060073008.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752165.1;locus_tag=LDO49_RS09960;product=phosphoenolpyruvate synthase;protein_id=WP_060073008.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 8370 9185 . + . ID=gene-LDO49_RS09965;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=LDO49_RS09965;old_locus_tag=BCEP4_150012 NZ_CAJZAV010000057.1 Protein Homology CDS 8370 9185 . + 0 ID=cds-WP_021159117.1;Parent=gene-LDO49_RS09965;Dbxref=GenBank:WP_021159117.1;Name=WP_021159117.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010104596.1;locus_tag=LDO49_RS09965;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_021159117.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 9289 10065 . - . ID=gene-LDO49_RS09970;Name=LDO49_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS09970;old_locus_tag=BCEP4_150013 NZ_CAJZAV010000057.1 Protein Homology CDS 9289 10065 . - 0 ID=cds-WP_059494106.1;Parent=gene-LDO49_RS09970;Dbxref=GenBank:WP_059494106.1;Name=WP_059494106.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004550266.1;locus_tag=LDO49_RS09970;product=TrmH family RNA methyltransferase;protein_id=WP_059494106.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 10062 10706 . - . ID=gene-LDO49_RS09975;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=LDO49_RS09975;old_locus_tag=BCEP4_150014 NZ_CAJZAV010000057.1 Protein Homology CDS 10062 10706 . - 0 ID=cds-WP_021159115.1;Parent=gene-LDO49_RS09975;Dbxref=GenBank:WP_021159115.1;Name=WP_021159115.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092075.1;locus_tag=LDO49_RS09975;product=ribonuclease HII;protein_id=WP_021159115.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 10703 11872 . - . ID=gene-LDO49_RS09980;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=LDO49_RS09980;old_locus_tag=BCEP4_150015 NZ_CAJZAV010000057.1 Protein Homology CDS 10703 11872 . - 0 ID=cds-WP_042974811.1;Parent=gene-LDO49_RS09980;Dbxref=GenBank:WP_042974811.1;Name=WP_042974811.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213142.1;locus_tag=LDO49_RS09980;product=lipid-A-disaccharide synthase;protein_id=WP_042974811.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 11876 12664 . - . ID=gene-LDO49_RS09985;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=LDO49_RS09985;old_locus_tag=BCEP4_150016 NZ_CAJZAV010000057.1 Protein Homology CDS 11876 12664 . - 0 ID=cds-WP_021159113.1;Parent=gene-LDO49_RS09985;Dbxref=GenBank:WP_021159113.1;Name=WP_021159113.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193051.1;locus_tag=LDO49_RS09985;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_021159113.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 12723 13190 . - . ID=gene-LDO49_RS09990;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=LDO49_RS09990;old_locus_tag=BCEP4_150017 NZ_CAJZAV010000057.1 Protein Homology CDS 12723 13190 . - 0 ID=cds-WP_021159112.1;Parent=gene-LDO49_RS09990;Dbxref=GenBank:WP_021159112.1;Name=WP_021159112.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192266.1;locus_tag=LDO49_RS09990;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_021159112.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 13320 14399 . - . ID=gene-LDO49_RS09995;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=LDO49_RS09995;old_locus_tag=BCEP4_150018 NZ_CAJZAV010000057.1 Protein Homology CDS 13320 14399 . - 0 ID=cds-WP_060073006.1;Parent=gene-LDO49_RS09995;Dbxref=GenBank:WP_060073006.1;Name=WP_060073006.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328756.1;locus_tag=LDO49_RS09995;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_060073006.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 14416 14913 . - . ID=gene-LDO49_RS10000;Name=LDO49_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10000;old_locus_tag=BCEP4_150019 NZ_CAJZAV010000057.1 Protein Homology CDS 14416 14913 . - 0 ID=cds-WP_011549544.1;Parent=gene-LDO49_RS10000;Dbxref=GenBank:WP_011549544.1;Name=WP_011549544.1;Ontology_term=GO:0051082,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=unfolded protein binding|0051082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352452.1;locus_tag=LDO49_RS10000;product=OmpH family outer membrane protein;protein_id=WP_011549544.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 14978 17287 . - . ID=gene-LDO49_RS10005;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=LDO49_RS10005;old_locus_tag=BCEP4_150020 NZ_CAJZAV010000057.1 Protein Homology CDS 14978 17287 . - 0 ID=cds-WP_060073004.1;Parent=gene-LDO49_RS10005;Dbxref=GenBank:WP_060073004.1;Name=WP_060073004.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352453.1;locus_tag=LDO49_RS10005;product=outer membrane protein assembly factor BamA;protein_id=WP_060073004.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 17349 18734 . - . ID=gene-LDO49_RS10010;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=LDO49_RS10010;old_locus_tag=BCEP4_150021 NZ_CAJZAV010000057.1 Protein Homology CDS 17349 18734 . - 0 ID=cds-WP_060073002.1;Parent=gene-LDO49_RS10010;Dbxref=GenBank:WP_060073002.1;Name=WP_060073002.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521191.1;locus_tag=LDO49_RS10010;product=RIP metalloprotease RseP;protein_id=WP_060073002.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 18746 19942 . - . ID=gene-LDO49_RS10015;Name=LDO49_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10015;old_locus_tag=BCEP4_150022 NZ_CAJZAV010000057.1 Protein Homology CDS 18746 19942 . - 0 ID=cds-WP_060073000.1;Parent=gene-LDO49_RS10015;Dbxref=GenBank:WP_060073000.1;Name=WP_060073000.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478497.1;locus_tag=LDO49_RS10015;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_060073000.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 19958 20779 . - . ID=gene-LDO49_RS10020;Name=LDO49_RS10020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10020;old_locus_tag=BCEP4_150023 NZ_CAJZAV010000057.1 Protein Homology CDS 19958 20779 . - 0 ID=cds-WP_042974809.1;Parent=gene-LDO49_RS10020;Dbxref=GenBank:WP_042974809.1;Name=WP_042974809.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896737.1;locus_tag=LDO49_RS10020;product=phosphatidate cytidylyltransferase;protein_id=WP_042974809.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 20773 21555 . - . ID=gene-LDO49_RS10025;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=LDO49_RS10025;old_locus_tag=BCEP4_150024 NZ_CAJZAV010000057.1 Protein Homology CDS 20773 21555 . - 0 ID=cds-WP_006478494.1;Parent=gene-LDO49_RS10025;Dbxref=GenBank:WP_006478494.1;Name=WP_006478494.1;Ontology_term=GO:0009252,GO:0005737;gbkey=CDS;gene=uppS;go_component=cytoplasm|0005737||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092065.1;locus_tag=LDO49_RS10025;product=polyprenyl diphosphate synthase;protein_id=WP_006478494.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 21603 22163 . - . ID=gene-LDO49_RS10030;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=LDO49_RS10030;old_locus_tag=BCEP4_150025 NZ_CAJZAV010000057.1 Protein Homology CDS 21603 22163 . - 0 ID=cds-WP_021159105.1;Parent=gene-LDO49_RS10030;Dbxref=GenBank:WP_021159105.1;Name=WP_021159105.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192143.1;locus_tag=LDO49_RS10030;product=ribosome recycling factor;protein_id=WP_021159105.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 22255 22968 . - . ID=gene-LDO49_RS10035;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=LDO49_RS10035;old_locus_tag=BCEP4_150026 NZ_CAJZAV010000057.1 Protein Homology CDS 22255 22968 . - 0 ID=cds-WP_011352459.1;Parent=gene-LDO49_RS10035;Dbxref=GenBank:WP_011352459.1;Name=WP_011352459.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010104618.1;locus_tag=LDO49_RS10035;product=UMP kinase;protein_id=WP_011352459.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 23132 24013 . - . ID=gene-LDO49_RS10040;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=LDO49_RS10040;old_locus_tag=BCEP4_150027 NZ_CAJZAV010000057.1 Protein Homology CDS 23132 24013 . - 0 ID=cds-WP_021159104.1;Parent=gene-LDO49_RS10040;Dbxref=GenBank:WP_021159104.1;Name=WP_021159104.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352460.1;locus_tag=LDO49_RS10040;product=translation elongation factor Ts;protein_id=WP_021159104.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 24176 24916 . - . ID=gene-LDO49_RS10045;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=LDO49_RS10045;old_locus_tag=BCEP4_150028 NZ_CAJZAV010000057.1 Protein Homology CDS 24176 24916 . - 0 ID=cds-WP_006483818.1;Parent=gene-LDO49_RS10045;Dbxref=GenBank:WP_006483818.1;Name=WP_006483818.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885144.1;locus_tag=LDO49_RS10045;product=30S ribosomal protein S2;protein_id=WP_006483818.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 25294 26109 . + . ID=gene-LDO49_RS10050;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=LDO49_RS10050;old_locus_tag=BCEP4_150029 NZ_CAJZAV010000057.1 Protein Homology CDS 25294 26109 . + 0 ID=cds-WP_021159103.1;Parent=gene-LDO49_RS10050;Dbxref=GenBank:WP_021159103.1;Name=WP_021159103.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478487.1;locus_tag=LDO49_RS10050;product=type I methionyl aminopeptidase;protein_id=WP_021159103.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 26164 28740 . + . ID=gene-LDO49_RS10055;Name=LDO49_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10055;old_locus_tag=BCEP4_150030 NZ_CAJZAV010000057.1 Protein Homology CDS 26164 28740 . + 0 ID=cds-WP_059490079.1;Parent=gene-LDO49_RS10055;Dbxref=GenBank:WP_059490079.1;Name=WP_059490079.1;Ontology_term=GO:0008152,GO:0008773;gbkey=CDS;go_function=[protein-PII] uridylyltransferase activity|0008773||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885147.1;locus_tag=LDO49_RS10055;product=[protein-PII] uridylyltransferase;protein_id=WP_059490079.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 28757 30754 . + . ID=gene-LDO49_RS10060;Name=LDO49_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10060;old_locus_tag=BCEP4_150031 NZ_CAJZAV010000057.1 Protein Homology CDS 28757 30754 . + 0 ID=cds-WP_081067293.1;Parent=gene-LDO49_RS10060;Dbxref=GenBank:WP_081067293.1;Name=WP_081067293.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328762.1;locus_tag=LDO49_RS10060;product=pseudouridine synthase;protein_id=WP_081067293.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 30844 31377 . - . ID=gene-LDO49_RS10065;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=LDO49_RS10065;old_locus_tag=BCEP4_150032 NZ_CAJZAV010000057.1 Protein Homology CDS 30844 31377 . - 0 ID=cds-WP_048020902.1;Parent=gene-LDO49_RS10065;Dbxref=GenBank:WP_048020902.1;Name=WP_048020902.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484650.1;locus_tag=LDO49_RS10065;product=peptide deformylase;protein_id=WP_048020902.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 31374 33449 . - . ID=gene-LDO49_RS10070;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=LDO49_RS10070;old_locus_tag=BCEP4_150033 NZ_CAJZAV010000057.1 Protein Homology CDS 31374 33449 . - 0 ID=cds-WP_060072998.1;Parent=gene-LDO49_RS10070;Dbxref=GenBank:WP_060072998.1;Name=WP_060072998.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328763.1;locus_tag=LDO49_RS10070;product=NAD-dependent DNA ligase LigA;protein_id=WP_060072998.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 33616 34908 . - . ID=gene-LDO49_RS10075;Name=LDO49_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10075;old_locus_tag=BCEP4_150034 NZ_CAJZAV010000057.1 Protein Homology CDS 33616 34908 . - 0 ID=cds-WP_060072996.1;Parent=gene-LDO49_RS10075;Dbxref=GenBank:WP_060072996.1;Name=WP_060072996.1;Ontology_term=GO:0090529;gbkey=CDS;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723224.1;locus_tag=LDO49_RS10075;product=cell division protein ZipA C-terminal FtsZ-binding domain-containing protein;protein_id=WP_060072996.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 34994 38506 . - . ID=gene-LDO49_RS10080;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=LDO49_RS10080;old_locus_tag=BCEP4_150035 NZ_CAJZAV010000057.1 Protein Homology CDS 34994 38506 . - 0 ID=cds-WP_048020898.1;Parent=gene-LDO49_RS10080;Dbxref=GenBank:WP_048020898.1;Name=WP_048020898.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527298.1;locus_tag=LDO49_RS10080;product=chromosome segregation protein SMC;protein_id=WP_048020898.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 38646 39587 . - . ID=gene-LDO49_RS10085;Name=LDO49_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10085;old_locus_tag=BCEP4_150036 NZ_CAJZAV010000057.1 Protein Homology CDS 38646 39587 . - 0 ID=cds-WP_027787082.1;Parent=gene-LDO49_RS10085;Dbxref=GenBank:WP_027787082.1;Name=WP_027787082.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364141.1;locus_tag=LDO49_RS10085;product=DMT family transporter;protein_id=WP_027787082.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 39747 40979 . + . ID=gene-LDO49_RS10090;Name=dapC;gbkey=Gene;gene=dapC;gene_biotype=protein_coding;locus_tag=LDO49_RS10090;old_locus_tag=BCEP4_150037 NZ_CAJZAV010000057.1 Protein Homology CDS 39747 40979 . + 0 ID=cds-WP_059624092.1;Parent=gene-LDO49_RS10090;Dbxref=GenBank:WP_059624092.1;Name=WP_059624092.1;Ontology_term=GO:0009089,GO:0009016;gbkey=CDS;gene=dapC;go_function=succinyldiaminopimelate transaminase activity|0009016||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402636.1;locus_tag=LDO49_RS10090;product=succinyldiaminopimelate transaminase;protein_id=WP_059624092.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 41024 41851 . + . ID=gene-LDO49_RS10095;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=LDO49_RS10095;old_locus_tag=BCEP4_150039 NZ_CAJZAV010000057.1 Protein Homology CDS 41024 41851 . + 0 ID=cds-WP_014896723.1;Parent=gene-LDO49_RS10095;Dbxref=GenBank:WP_014896723.1;Name=WP_014896723.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007580558.1;locus_tag=LDO49_RS10095;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_014896723.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 41851 42219 . + . ID=gene-LDO49_RS10100;Name=LDO49_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10100;old_locus_tag=BCEP4_150038 NZ_CAJZAV010000057.1 Protein Homology CDS 41851 42219 . + 0 ID=cds-WP_060072994.1;Parent=gene-LDO49_RS10100;Dbxref=GenBank:WP_060072994.1;Name=WP_060072994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885155.1;locus_tag=LDO49_RS10100;product=ArsC family reductase;protein_id=WP_060072994.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 42310 43449 . + . ID=gene-LDO49_RS10105;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=LDO49_RS10105;old_locus_tag=BCEP4_150041 NZ_CAJZAV010000057.1 Protein Homology CDS 42310 43449 . + 0 ID=cds-WP_060072992.1;Parent=gene-LDO49_RS10105;Dbxref=GenBank:WP_060072992.1;Name=WP_060072992.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493370.1;locus_tag=LDO49_RS10105;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_060072992.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 43461 44369 . + . ID=gene-LDO49_RS10110;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=LDO49_RS10110;old_locus_tag=BCEP4_150040 NZ_CAJZAV010000057.1 Protein Homology CDS 43461 44369 . + 0 ID=cds-WP_021159092.1;Parent=gene-LDO49_RS10110;Dbxref=GenBank:WP_021159092.1;Name=WP_021159092.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755452.1;locus_tag=LDO49_RS10110;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_021159092.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 44478 45917 . + . ID=gene-LDO49_RS10115;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=LDO49_RS10115;old_locus_tag=BCEP4_150042 NZ_CAJZAV010000057.1 Protein Homology CDS 44478 45917 . + 0 ID=cds-WP_021159091.1;Parent=gene-LDO49_RS10115;Dbxref=GenBank:WP_021159091.1;Name=WP_021159091.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601207.1;locus_tag=LDO49_RS10115;product=cardiolipin synthase;protein_id=WP_021159091.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 45978 46457 . - . ID=gene-LDO49_RS10120;Name=LDO49_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10120;old_locus_tag=BCEP4_150043 NZ_CAJZAV010000057.1 Protein Homology CDS 45978 46457 . - 0 ID=cds-WP_021159090.1;Parent=gene-LDO49_RS10120;Dbxref=GenBank:WP_021159090.1;Name=WP_021159090.1;Ontology_term=GO:0004602,GO:0043295;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA,glutathione binding|0043295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904829.1;locus_tag=LDO49_RS10120;product=glutathione peroxidase;protein_id=WP_021159090.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 46594 48525 . + . ID=gene-LDO49_RS10125;Name=LDO49_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10125;old_locus_tag=BCEP4_150044 NZ_CAJZAV010000057.1 Protein Homology CDS 46594 48525 . + 0 ID=cds-WP_042974800.1;Parent=gene-LDO49_RS10125;Dbxref=GenBank:WP_042974800.1;Name=WP_042974800.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851825.1;locus_tag=LDO49_RS10125;product=ATP-binding cassette domain-containing protein;protein_id=WP_042974800.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 48731 48997 . - . ID=gene-LDO49_RS10130;Name=LDO49_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10130;old_locus_tag=BCEP4_150045 NZ_CAJZAV010000057.1 Protein Homology CDS 48731 48997 . - 0 ID=cds-WP_021159088.1;Parent=gene-LDO49_RS10130;Dbxref=GenBank:WP_021159088.1;Name=WP_021159088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549526.1;locus_tag=LDO49_RS10130;product=DUF2866 domain-containing protein;protein_id=WP_021159088.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 49144 50520 . - . ID=gene-LDO49_RS10135;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=LDO49_RS10135;old_locus_tag=BCEP4_150046 NZ_CAJZAV010000057.1 Protein Homology CDS 49144 50520 . - 0 ID=cds-WP_059490088.1;Parent=gene-LDO49_RS10135;Dbxref=GenBank:WP_059490088.1;Name=WP_059490088.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026043.1;locus_tag=LDO49_RS10135;product=DNA repair protein RadA;protein_id=WP_059490088.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 50532 51602 . - . ID=gene-LDO49_RS10140;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=LDO49_RS10140;old_locus_tag=BCEP4_150047 NZ_CAJZAV010000057.1 Protein Homology CDS 50532 51602 . - 0 ID=cds-WP_124474937.1;Parent=gene-LDO49_RS10140;Dbxref=GenBank:WP_124474937.1;Name=WP_124474937.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331722.1;locus_tag=LDO49_RS10140;product=alanine racemase;protein_id=WP_124474937.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 51821 53128 . + . ID=gene-LDO49_RS10145;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=LDO49_RS10145;old_locus_tag=BCEP4_150048 NZ_CAJZAV010000057.1 Protein Homology CDS 51821 53128 . + 0 ID=cds-WP_060068149.1;Parent=gene-LDO49_RS10145;Dbxref=GenBank:WP_060068149.1;Name=WP_060068149.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885164.1;locus_tag=LDO49_RS10145;product=lysophospholipid transporter LplT;protein_id=WP_060068149.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 53187 53996 . + . ID=gene-LDO49_RS10150;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=LDO49_RS10150;old_locus_tag=BCEP4_150049 NZ_CAJZAV010000057.1 Protein Homology CDS 53187 53996 . + 0 ID=cds-WP_059856801.1;Parent=gene-LDO49_RS10150;Dbxref=GenBank:WP_059856801.1;Name=WP_059856801.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092038.1;locus_tag=LDO49_RS10150;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_059856801.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 54015 54980 . - . ID=gene-LDO49_RS10155;Name=LDO49_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10155;old_locus_tag=BCEP4_150050 NZ_CAJZAV010000057.1 Protein Homology CDS 54015 54980 . - 0 ID=cds-WP_059490091.1;Parent=gene-LDO49_RS10155;Dbxref=GenBank:WP_059490091.1;Name=WP_059490091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478466.1;locus_tag=LDO49_RS10155;product=DUF1853 family protein;protein_id=WP_059490091.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 54977 56023 . - . ID=gene-LDO49_RS10160;Name=LDO49_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10160;old_locus_tag=BCEP4_150051 NZ_CAJZAV010000057.1 Protein Homology CDS 54977 56023 . - 0 ID=cds-WP_060072986.1;Parent=gene-LDO49_RS10160;Dbxref=GenBank:WP_060072986.1;Name=WP_060072986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492692.1;locus_tag=LDO49_RS10160;product=uracil-DNA glycosylase;protein_id=WP_060072986.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 56010 56510 . - . ID=gene-LDO49_RS10165;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=LDO49_RS10165;old_locus_tag=BCEP4_150052 NZ_CAJZAV010000057.1 Protein Homology CDS 56010 56510 . - 0 ID=cds-WP_060072984.1;Parent=gene-LDO49_RS10165;Dbxref=GenBank:WP_060072984.1;Name=WP_060072984.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=protein-N-terminal-alanine acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364154.1;locus_tag=LDO49_RS10165;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_060072984.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 56507 57274 . - . ID=gene-LDO49_RS10170;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=LDO49_RS10170;old_locus_tag=BCEP4_150053 NZ_CAJZAV010000057.1 Protein Homology CDS 56507 57274 . - 0 ID=cds-WP_060072982.1;Parent=gene-LDO49_RS10170;Dbxref=GenBank:WP_060072982.1;Name=WP_060072982.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549519.1;locus_tag=LDO49_RS10170;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_060072982.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 57422 57691 . + . ID=gene-LDO49_RS10175;Name=LDO49_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10175;old_locus_tag=BCEP4_150054 NZ_CAJZAV010000057.1 Protein Homology CDS 57422 57691 . + 0 ID=cds-WP_011352486.1;Parent=gene-LDO49_RS10175;Dbxref=GenBank:WP_011352486.1;Name=WP_011352486.1;Ontology_term=GO:0000062;gbkey=CDS;go_function=fatty-acyl-CoA binding|0000062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763999.1;locus_tag=LDO49_RS10175;product=acyl-CoA-binding protein;protein_id=WP_011352486.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 58073 59614 . + . ID=gene-LDO49_RS10180;Name=LDO49_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10180;old_locus_tag=BCEP4_150057 NZ_CAJZAV010000057.1 Protein Homology CDS 58073 59614 . + 0 ID=cds-WP_021159078.1;Parent=gene-LDO49_RS10180;Dbxref=GenBank:WP_021159078.1;Name=WP_021159078.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491421.1;locus_tag=LDO49_RS10180;product=DEAD/DEAH box helicase;protein_id=WP_021159078.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 60008 61315 . + . ID=gene-LDO49_RS10185;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=LDO49_RS10185;old_locus_tag=BCEP4_150059 NZ_CAJZAV010000057.1 Protein Homology CDS 60008 61315 . + 0 ID=cds-WP_060072980.1;Parent=gene-LDO49_RS10185;Dbxref=GenBank:WP_060072980.1;Name=WP_060072980.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009931004.1;locus_tag=LDO49_RS10185;product=isocitrate lyase;protein_id=WP_060072980.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 61506 61940 . - . ID=gene-LDO49_RS10190;Name=LDO49_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10190;old_locus_tag=BCEP4_150060 NZ_CAJZAV010000057.1 Protein Homology CDS 61506 61940 . - 0 ID=cds-WP_011352489.1;Parent=gene-LDO49_RS10190;Dbxref=GenBank:WP_011352489.1;Name=WP_011352489.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007580518.1;locus_tag=LDO49_RS10190;product=universal stress protein;protein_id=WP_011352489.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 62112 63017 . - . ID=gene-LDO49_RS10195;Name=LDO49_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10195;old_locus_tag=BCEP4_150061 NZ_CAJZAV010000057.1 Protein Homology CDS 62112 63017 . - 0 ID=cds-WP_021159074.1;Parent=gene-LDO49_RS10195;Dbxref=GenBank:WP_021159074.1;Name=WP_021159074.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762069.1;locus_tag=LDO49_RS10195;product=LysR family transcriptional regulator;protein_id=WP_021159074.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 63172 63933 . + . ID=gene-LDO49_RS10200;Name=LDO49_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10200;old_locus_tag=BCEP4_150063 NZ_CAJZAV010000057.1 Protein Homology CDS 63172 63933 . + 0 ID=cds-WP_021159073.1;Parent=gene-LDO49_RS10200;Dbxref=GenBank:WP_021159073.1;Name=WP_021159073.1;Ontology_term=GO:0019120;gbkey=CDS;go_function=hydrolase activity%2C acting on acid halide bonds%2C in C-halide compounds|0019120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213122.1;locus_tag=LDO49_RS10200;product=haloacid dehalogenase type II;protein_id=WP_021159073.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 63999 65591 . + . ID=gene-LDO49_RS10205;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=LDO49_RS10205;old_locus_tag=BCEP4_150064 NZ_CAJZAV010000057.1 Protein Homology CDS 63999 65591 . + 0 ID=cds-WP_021159072.1;Parent=gene-LDO49_RS10205;Dbxref=GenBank:WP_021159072.1;Name=WP_021159072.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026029.1;locus_tag=LDO49_RS10205;product=malate synthase A;protein_id=WP_021159072.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 65727 66140 . - . ID=gene-LDO49_RS10210;Name=LDO49_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10210;old_locus_tag=BCEP4_150065 NZ_CAJZAV010000057.1 Protein Homology CDS 65727 66140 . - 0 ID=cds-WP_060072978.1;Parent=gene-LDO49_RS10210;Dbxref=GenBank:WP_060072978.1;Name=WP_060072978.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352493.1;locus_tag=LDO49_RS10210;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_060072978.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 66418 67293 . + . ID=gene-LDO49_RS10215;Name=LDO49_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10215;old_locus_tag=BCEP4_150066 NZ_CAJZAV010000057.1 Protein Homology CDS 66418 67293 . + 0 ID=cds-WP_059856815.1;Parent=gene-LDO49_RS10215;Dbxref=GenBank:WP_059856815.1;Name=WP_059856815.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755348.1;locus_tag=LDO49_RS10215;product=AraC family transcriptional regulator;protein_id=WP_059856815.1;transl_table=11 NZ_CAJZAV010000057.1 RefSeq gene 67320 67784 . - . ID=gene-LDO49_RS10220;Name=LDO49_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10220;old_locus_tag=BCEP4_150067 NZ_CAJZAV010000057.1 Protein Homology CDS 67320 67784 . - 0 ID=cds-WP_021159069.1;Parent=gene-LDO49_RS10220;Dbxref=GenBank:WP_021159069.1;Name=WP_021159069.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402608.1;locus_tag=LDO49_RS10220;product=GNAT family N-acetyltransferase;protein_id=WP_021159069.1;transl_table=11 ##sequence-region NZ_CAJZAV010000058.1 1 5115 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000058.1 RefSeq region 1 5115 . + . ID=NZ_CAJZAV010000058.1:1..5115;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_150 NZ_CAJZAV010000058.1 RefSeq gene 1 612 . - . ID=gene-LDO49_RS10225;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=LDO49_RS10225;partial=true;start_range=.,1 NZ_CAJZAV010000058.1 Protein Homology CDS 1 612 . - 0 ID=cds-WP_224051702.1;Parent=gene-LDO49_RS10225;Dbxref=GenBank:WP_224051702.1;Name=WP_224051702.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352871.1;locus_tag=LDO49_RS10225;partial=true;product=hydroxymethylbilane synthase;protein_id=WP_224051702.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000058.1 RefSeq gene 820 3834 . + . ID=gene-LDO49_RS10230;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=LDO49_RS10230;old_locus_tag=BCEP4_1500002 NZ_CAJZAV010000058.1 Protein Homology CDS 820 3834 . + 0 ID=cds-WP_060069643.1;Parent=gene-LDO49_RS10230;Dbxref=GenBank:WP_060069643.1;Name=WP_060069643.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212910.1;locus_tag=LDO49_RS10230;product=phosphoenolpyruvate carboxylase;protein_id=WP_060069643.1;transl_table=11 NZ_CAJZAV010000058.1 RefSeq gene 3970 4648 . - . ID=gene-LDO49_RS10235;Name=LDO49_RS10235;end_range=4648,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10235;old_locus_tag=BCEP4_1500003;partial=true NZ_CAJZAV010000058.1 Protein Homology CDS 3970 4648 . - 1 ID=cds-WP_443797936.1;Parent=gene-LDO49_RS10235;Dbxref=GenBank:WP_443797936.1;Name=WP_443797936.1;Ontology_term=GO:0008168,GO:1904047;end_range=4648,.;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014190700.1;locus_tag=LDO49_RS10235;partial=true;product=class I SAM-dependent methyltransferase;protein_id=WP_443797936.1;transl_table=11 NZ_CAJZAV010000058.1 RefSeq pseudogene 4659 4751 . - . ID=gene-LDO49_RS37925;Name=LDO49_RS37925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37925;partial=true;pseudo=true;start_range=.,4659 NZ_CAJZAV010000058.1 Protein Homology CDS 4659 4751 . - 0 ID=cds-LDO49_RS37925;Parent=gene-LDO49_RS37925;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014190700.1;locus_tag=LDO49_RS37925;partial=true;product=SAM-dependent methyltransferase;pseudo=true;start_range=.,4659;transl_table=11 NZ_CAJZAV010000058.1 RefSeq pseudogene 4970 5115 . + . ID=gene-LDO49_RS10240;Name=LDO49_RS10240;end_range=5115,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS10240;partial=true;pseudo=true NZ_CAJZAV010000058.1 Protein Homology CDS 4970 5115 . + 0 ID=cds-LDO49_RS10240;Parent=gene-LDO49_RS10240;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5115,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492931.1;locus_tag=LDO49_RS10240;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000059.1 1 32093 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000059.1 RefSeq region 1 32093 . + . ID=NZ_CAJZAV010000059.1:1..32093;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_151 NZ_CAJZAV010000059.1 RefSeq gene 1 220 . + . ID=gene-LDO49_RS10245;Name=LDO49_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10245;partial=true;start_range=.,1 NZ_CAJZAV010000059.1 Protein Homology CDS 1 220 . + 1 ID=cds-WP_224051703.1;Parent=gene-LDO49_RS10245;Dbxref=GenBank:WP_224051703.1;Name=WP_224051703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396684.1;locus_tag=LDO49_RS10245;partial=true;product=DUF3156 family protein;protein_id=WP_224051703.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 284 1222 . + . ID=gene-LDO49_RS10250;Name=LDO49_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10250;old_locus_tag=BCEP4_1510002 NZ_CAJZAV010000059.1 Protein Homology CDS 284 1222 . + 0 ID=cds-WP_021163645.1;Parent=gene-LDO49_RS10250;Dbxref=GenBank:WP_021163645.1;Name=WP_021163645.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760759.1;locus_tag=LDO49_RS10250;product=helix-turn-helix domain-containing protein;protein_id=WP_021163645.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 1390 2598 . + . ID=gene-LDO49_RS10255;Name=LDO49_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10255;old_locus_tag=BCEP4_1510003 NZ_CAJZAV010000059.1 Protein Homology CDS 1390 2598 . + 0 ID=cds-WP_059812886.1;Parent=gene-LDO49_RS10255;Dbxref=GenBank:WP_059812886.1;Name=WP_059812886.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411591.1;locus_tag=LDO49_RS10255;product=porin;protein_id=WP_059812886.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 2794 4032 . + . ID=gene-LDO49_RS10260;Name=LDO49_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10260;old_locus_tag=BCEP4_1510004 NZ_CAJZAV010000059.1 Protein Homology CDS 2794 4032 . + 0 ID=cds-WP_048022011.1;Parent=gene-LDO49_RS10260;Dbxref=GenBank:WP_048022011.1;Name=WP_048022011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480924.1;locus_tag=LDO49_RS10260;product=ABC transporter substrate-binding protein;protein_id=WP_048022011.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 4067 4936 . + . ID=gene-LDO49_RS10265;Name=LDO49_RS10265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10265;old_locus_tag=BCEP4_1510005 NZ_CAJZAV010000059.1 Protein Homology CDS 4067 4936 . + 0 ID=cds-WP_059490151.1;Parent=gene-LDO49_RS10265;Dbxref=GenBank:WP_059490151.1;Name=WP_059490151.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480925.1;locus_tag=LDO49_RS10265;product=carbohydrate ABC transporter permease;protein_id=WP_059490151.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 4933 5793 . + . ID=gene-LDO49_RS10270;Name=LDO49_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10270;old_locus_tag=BCEP4_1510006 NZ_CAJZAV010000059.1 Protein Homology CDS 4933 5793 . + 0 ID=cds-WP_048022008.1;Parent=gene-LDO49_RS10270;Dbxref=GenBank:WP_048022008.1;Name=WP_048022008.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547367.1;locus_tag=LDO49_RS10270;product=carbohydrate ABC transporter permease;protein_id=WP_048022008.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 5891 6928 . - . ID=gene-LDO49_RS10275;Name=LDO49_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10275;old_locus_tag=BCEP4_1510007 NZ_CAJZAV010000059.1 Protein Homology CDS 5891 6928 . - 0 ID=cds-WP_224051704.1;Parent=gene-LDO49_RS10275;Dbxref=GenBank:WP_224051704.1;Name=WP_224051704.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659146.1;locus_tag=LDO49_RS10275;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_224051704.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 6935 7855 . + . ID=gene-LDO49_RS10280;Name=LDO49_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10280;old_locus_tag=BCEP4_1510008 NZ_CAJZAV010000059.1 Protein Homology CDS 6935 7855 . + 0 ID=cds-WP_155644153.1;Parent=gene-LDO49_RS10280;Dbxref=GenBank:WP_155644153.1;Name=WP_155644153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547369.1;locus_tag=LDO49_RS10280;product=phosphatidylinositol-specific phospholipase C;protein_id=WP_155644153.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 7852 8817 . - . ID=gene-LDO49_RS10285;Name=LDO49_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10285;old_locus_tag=BCEP4_1510009 NZ_CAJZAV010000059.1 Protein Homology CDS 7852 8817 . - 0 ID=cds-WP_124844487.1;Parent=gene-LDO49_RS10285;Dbxref=GenBank:WP_124844487.1;Name=WP_124844487.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725359.1;locus_tag=LDO49_RS10285;product=alpha/beta hydrolase family protein;protein_id=WP_124844487.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 8907 9245 . - . ID=gene-LDO49_RS10290;Name=LDO49_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10290;old_locus_tag=BCEP4_1510010 NZ_CAJZAV010000059.1 GeneMarkS-2+ CDS 8907 9245 . - 0 ID=cds-WP_021163637.1;Parent=gene-LDO49_RS10290;Dbxref=GenBank:WP_021163637.1;Name=WP_021163637.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS10290;product=hypothetical protein;protein_id=WP_021163637.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 9283 9894 . - . ID=gene-LDO49_RS10295;Name=LDO49_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10295;old_locus_tag=BCEP4_1510011 NZ_CAJZAV010000059.1 Protein Homology CDS 9283 9894 . - 0 ID=cds-WP_048022001.1;Parent=gene-LDO49_RS10295;Dbxref=GenBank:WP_048022001.1;Name=WP_048022001.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760511.1;locus_tag=LDO49_RS10295;product=LysE family translocator;protein_id=WP_048022001.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 9983 10510 . + . ID=gene-LDO49_RS10300;Name=LDO49_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10300;old_locus_tag=BCEP4_1510012 NZ_CAJZAV010000059.1 Protein Homology CDS 9983 10510 . + 0 ID=cds-WP_124627247.1;Parent=gene-LDO49_RS10300;Dbxref=GenBank:WP_124627247.1;Name=WP_124627247.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354553.1;locus_tag=LDO49_RS10300;product=GNAT family N-acetyltransferase;protein_id=WP_124627247.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 10553 11608 . - . ID=gene-LDO49_RS10305;Name=LDO49_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10305;old_locus_tag=BCEP4_1510013 NZ_CAJZAV010000059.1 Protein Homology CDS 10553 11608 . - 0 ID=cds-WP_224051705.1;Parent=gene-LDO49_RS10305;Dbxref=GenBank:WP_224051705.1;Name=WP_224051705.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480931.1;locus_tag=LDO49_RS10305;product=LysR family transcriptional regulator;protein_id=WP_224051705.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 11588 12775 . + . ID=gene-LDO49_RS10310;Name=LDO49_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10310;old_locus_tag=BCEP4_1510014 NZ_CAJZAV010000059.1 Protein Homology CDS 11588 12775 . + 0 ID=cds-WP_060074783.1;Parent=gene-LDO49_RS10310;Dbxref=GenBank:WP_060074783.1;Name=WP_060074783.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354555.1;locus_tag=LDO49_RS10310;product=M20 aminoacylase family protein;protein_id=WP_060074783.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 12836 14008 . + . ID=gene-LDO49_RS10315;Name=LDO49_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10315;old_locus_tag=BCEP4_1510015 NZ_CAJZAV010000059.1 Protein Homology CDS 12836 14008 . + 0 ID=cds-WP_059494810.1;Parent=gene-LDO49_RS10315;Dbxref=GenBank:WP_059494810.1;Name=WP_059494810.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547374.1;locus_tag=LDO49_RS10315;product=porin;protein_id=WP_059494810.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 14022 15314 . + . ID=gene-LDO49_RS10320;Name=LDO49_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10320;old_locus_tag=BCEP4_1510016 NZ_CAJZAV010000059.1 Protein Homology CDS 14022 15314 . + 0 ID=cds-WP_224051706.1;Parent=gene-LDO49_RS10320;Dbxref=GenBank:WP_224051706.1;Name=WP_224051706.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354557.1;locus_tag=LDO49_RS10320;product=MFS transporter;protein_id=WP_224051706.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 15415 16476 . - . ID=gene-LDO49_RS10325;Name=LDO49_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10325;old_locus_tag=BCEP4_1510017 NZ_CAJZAV010000059.1 Protein Homology CDS 15415 16476 . - 0 ID=cds-WP_042978074.1;Parent=gene-LDO49_RS10325;Dbxref=GenBank:WP_042978074.1;Name=WP_042978074.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602739.1;locus_tag=LDO49_RS10325;product=alkene reductase;protein_id=WP_042978074.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 16558 16866 . - . ID=gene-LDO49_RS10330;Name=LDO49_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10330;old_locus_tag=BCEP4_1510019 NZ_CAJZAV010000059.1 Protein Homology CDS 16558 16866 . - 0 ID=cds-WP_027789442.1;Parent=gene-LDO49_RS10330;Dbxref=GenBank:WP_027789442.1;Name=WP_027789442.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898858.1;locus_tag=LDO49_RS10330;product=ArsR/SmtB family transcription factor;protein_id=WP_027789442.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 17377 18057 . + . ID=gene-LDO49_RS10335;Name=LDO49_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10335;old_locus_tag=BCEP4_1510018 NZ_CAJZAV010000059.1 Protein Homology CDS 17377 18057 . + 0 ID=cds-WP_059589192.1;Parent=gene-LDO49_RS10335;Dbxref=GenBank:WP_059589192.1;Name=WP_059589192.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354569.1;locus_tag=LDO49_RS10335;product=HAD family hydrolase;protein_id=WP_059589192.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 18352 19521 . + . ID=gene-LDO49_RS10340;Name=LDO49_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10340;old_locus_tag=BCEP4_1510021 NZ_CAJZAV010000059.1 Protein Homology CDS 18352 19521 . + 0 ID=cds-WP_060074780.1;Parent=gene-LDO49_RS10340;Dbxref=GenBank:WP_060074780.1;Name=WP_060074780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009978441.1;locus_tag=LDO49_RS10340;product=alpha/beta fold hydrolase;protein_id=WP_060074780.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 19624 20763 . - . ID=gene-LDO49_RS10345;Name=LDO49_RS10345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10345;old_locus_tag=BCEP4_1510022 NZ_CAJZAV010000059.1 Protein Homology CDS 19624 20763 . - 0 ID=cds-WP_060074779.1;Parent=gene-LDO49_RS10345;Dbxref=GenBank:WP_060074779.1;Name=WP_060074779.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354573.1;locus_tag=LDO49_RS10345;product=patatin-like phospholipase family protein;protein_id=WP_060074779.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 21001 21462 . - . ID=gene-LDO49_RS10350;Name=LDO49_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10350;old_locus_tag=BCEP4_1510023 NZ_CAJZAV010000059.1 Protein Homology CDS 21001 21462 . - 0 ID=cds-WP_059494820.1;Parent=gene-LDO49_RS10350;Dbxref=GenBank:WP_059494820.1;Name=WP_059494820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496877.1;locus_tag=LDO49_RS10350;product=cupin domain-containing protein;protein_id=WP_059494820.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 21555 21887 . - . ID=gene-LDO49_RS10355;Name=LDO49_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10355;old_locus_tag=BCEP4_1510024 NZ_CAJZAV010000059.1 Protein Homology CDS 21555 21887 . - 0 ID=cds-WP_021163625.1;Parent=gene-LDO49_RS10355;Dbxref=GenBank:WP_021163625.1;Name=WP_021163625.1;Ontology_term=GO:0005507,GO:0009055;gbkey=CDS;go_function=copper ion binding|0005507||IEA,electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753645.1;locus_tag=LDO49_RS10355;product=cupredoxin domain-containing protein;protein_id=WP_021163625.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 21913 22857 . - . ID=gene-LDO49_RS10360;Name=LDO49_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10360;old_locus_tag=BCEP4_1510025 NZ_CAJZAV010000059.1 Protein Homology CDS 21913 22857 . - 0 ID=cds-WP_060074778.1;Parent=gene-LDO49_RS10360;Dbxref=GenBank:WP_060074778.1;Name=WP_060074778.1;Ontology_term=GO:0016787,GO:0042578,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547381.1;locus_tag=LDO49_RS10360;product=metallophosphoesterase family protein;protein_id=WP_060074778.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 23113 24702 . + . ID=gene-LDO49_RS10365;Name=LDO49_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10365;old_locus_tag=BCEP4_1510026 NZ_CAJZAV010000059.1 Protein Homology CDS 23113 24702 . + 0 ID=cds-WP_060074777.1;Parent=gene-LDO49_RS10365;Dbxref=GenBank:WP_060074777.1;Name=WP_060074777.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012426198.1;locus_tag=LDO49_RS10365;product=inorganic phosphate transporter;protein_id=WP_060074777.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 24784 26538 . + . ID=gene-LDO49_RS10370;Name=LDO49_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10370;old_locus_tag=BCEP4_1510027 NZ_CAJZAV010000059.1 Protein Homology CDS 24784 26538 . + 0 ID=cds-WP_060074776.1;Parent=gene-LDO49_RS10370;Dbxref=GenBank:WP_060074776.1;Name=WP_060074776.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892433.1;locus_tag=LDO49_RS10370;product=ABC transporter permease;protein_id=WP_060074776.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 26550 27896 . + . ID=gene-LDO49_RS10375;Name=LDO49_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10375;old_locus_tag=BCEP4_1510028 NZ_CAJZAV010000059.1 Protein Homology CDS 26550 27896 . + 0 ID=cds-WP_021163621.1;Parent=gene-LDO49_RS10375;Dbxref=GenBank:WP_021163621.1;Name=WP_021163621.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484429.1;locus_tag=LDO49_RS10375;product=ABC transporter ATP-binding protein;protein_id=WP_021163621.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 27924 28169 . - . ID=gene-LDO49_RS10380;Name=LDO49_RS10380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10380;old_locus_tag=BCEP4_1510029 NZ_CAJZAV010000059.1 GeneMarkS-2+ CDS 27924 28169 . - 0 ID=cds-WP_224051707.1;Parent=gene-LDO49_RS10380;Dbxref=GenBank:WP_224051707.1;Name=WP_224051707.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS10380;product=hypothetical protein;protein_id=WP_224051707.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 28245 28643 . - . ID=gene-LDO49_RS10385;Name=LDO49_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10385;old_locus_tag=BCEP4_1510030 NZ_CAJZAV010000059.1 Protein Homology CDS 28245 28643 . - 0 ID=cds-WP_059589629.1;Parent=gene-LDO49_RS10385;Dbxref=GenBank:WP_059589629.1;Name=WP_059589629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354605.1;locus_tag=LDO49_RS10385;product=DUF3331 domain-containing protein;protein_id=WP_059589629.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 28688 29980 . - . ID=gene-LDO49_RS10390;Name=LDO49_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10390;old_locus_tag=BCEP4_1510031 NZ_CAJZAV010000059.1 Protein Homology CDS 28688 29980 . - 0 ID=cds-WP_060074775.1;Parent=gene-LDO49_RS10390;Dbxref=GenBank:WP_060074775.1;Name=WP_060074775.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547388.1;locus_tag=LDO49_RS10390;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_060074775.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 30129 30782 . + . ID=gene-LDO49_RS10395;Name=LDO49_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10395;old_locus_tag=BCEP4_1510032 NZ_CAJZAV010000059.1 Protein Homology CDS 30129 30782 . + 0 ID=cds-WP_060074774.1;Parent=gene-LDO49_RS10395;Dbxref=GenBank:WP_060074774.1;Name=WP_060074774.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396723.1;locus_tag=LDO49_RS10395;product=TetR/AcrR family transcriptional regulator;protein_id=WP_060074774.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 30805 31716 . - . ID=gene-LDO49_RS10400;Name=LDO49_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10400;old_locus_tag=BCEP4_1510033 NZ_CAJZAV010000059.1 Protein Homology CDS 30805 31716 . - 0 ID=cds-WP_060074773.1;Parent=gene-LDO49_RS10400;Dbxref=GenBank:WP_060074773.1;Name=WP_060074773.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752590.1;locus_tag=LDO49_RS10400;product=LysR family transcriptional regulator;protein_id=WP_060074773.1;transl_table=11 NZ_CAJZAV010000059.1 RefSeq gene 31825 32093 . + . ID=gene-LDO49_RS10405;Name=LDO49_RS10405;end_range=32093,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10405;partial=true NZ_CAJZAV010000059.1 Protein Homology CDS 31825 32093 . + 0 ID=cds-WP_224051708.1;Parent=gene-LDO49_RS10405;Dbxref=GenBank:WP_224051708.1;Name=WP_224051708.1;end_range=32093,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480950.1;locus_tag=LDO49_RS10405;partial=true;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_224051708.1;transl_table=11 ##sequence-region NZ_CAJZAV010000060.1 1 6780 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000060.1 RefSeq region 1 6780 . + . ID=NZ_CAJZAV010000060.1:1..6780;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_152 NZ_CAJZAV010000060.1 RefSeq gene 85 1257 . - . ID=gene-LDO49_RS10410;Name=LDO49_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10410;old_locus_tag=BCEP4_1520002 NZ_CAJZAV010000060.1 Protein Homology CDS 85 1257 . - 0 ID=cds-WP_042978316.1;Parent=gene-LDO49_RS10410;Dbxref=GenBank:WP_042978316.1;Name=WP_042978316.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546412.1;locus_tag=LDO49_RS10410;product=flagellar basal body P-ring protein FlgI;protein_id=WP_042978316.1;transl_table=11 NZ_CAJZAV010000060.1 RefSeq gene 1263 1955 . - . ID=gene-LDO49_RS10415;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=LDO49_RS10415;old_locus_tag=BCEP4_1520003 NZ_CAJZAV010000060.1 Protein Homology CDS 1263 1955 . - 0 ID=cds-WP_021164161.1;Parent=gene-LDO49_RS10415;Dbxref=GenBank:WP_021164161.1;Name=WP_021164161.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495504.1;locus_tag=LDO49_RS10415;product=flagellar basal body L-ring protein FlgH;protein_id=WP_021164161.1;transl_table=11 NZ_CAJZAV010000060.1 RefSeq gene 1977 2765 . - . ID=gene-LDO49_RS10420;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=LDO49_RS10420;old_locus_tag=BCEP4_1520004 NZ_CAJZAV010000060.1 Protein Homology CDS 1977 2765 . - 0 ID=cds-WP_021164160.1;Parent=gene-LDO49_RS10420;Dbxref=GenBank:WP_021164160.1;Name=WP_021164160.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895799.1;locus_tag=LDO49_RS10420;product=flagellar basal-body rod protein FlgG;protein_id=WP_021164160.1;transl_table=11 NZ_CAJZAV010000060.1 RefSeq gene 2800 3558 . - . ID=gene-LDO49_RS10425;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=LDO49_RS10425;old_locus_tag=BCEP4_1520005 NZ_CAJZAV010000060.1 Protein Homology CDS 2800 3558 . - 0 ID=cds-WP_027788921.1;Parent=gene-LDO49_RS10425;Dbxref=GenBank:WP_027788921.1;Name=WP_027788921.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgF;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010112969.1;locus_tag=LDO49_RS10425;product=flagellar basal-body rod protein FlgF;protein_id=WP_027788921.1;transl_table=11 NZ_CAJZAV010000060.1 RefSeq gene 3578 4819 . - . ID=gene-LDO49_RS10430;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=LDO49_RS10430;old_locus_tag=BCEP4_1520006 NZ_CAJZAV010000060.1 Protein Homology CDS 3578 4819 . - 0 ID=cds-WP_021164158.1;Parent=gene-LDO49_RS10430;Dbxref=GenBank:WP_021164158.1;Name=WP_021164158.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763175.1;locus_tag=LDO49_RS10430;product=flagellar hook protein FlgE;protein_id=WP_021164158.1;transl_table=11 NZ_CAJZAV010000060.1 RefSeq gene 4853 5605 . - . ID=gene-LDO49_RS10435;Name=flgD;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=LDO49_RS10435;old_locus_tag=BCEP4_1520007 NZ_CAJZAV010000060.1 Protein Homology CDS 4853 5605 . - 0 ID=cds-WP_021164157.1;Parent=gene-LDO49_RS10435;Dbxref=GenBank:WP_021164157.1;Name=WP_021164157.1;gbkey=CDS;gene=flgD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895796.1;locus_tag=LDO49_RS10435;product=flagellar hook assembly protein FlgD;protein_id=WP_021164157.1;transl_table=11 NZ_CAJZAV010000060.1 RefSeq gene 5670 6095 . - . ID=gene-LDO49_RS10440;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=LDO49_RS10440;old_locus_tag=BCEP4_1520008 NZ_CAJZAV010000060.1 Protein Homology CDS 5670 6095 . - 0 ID=cds-WP_021164156.1;Parent=gene-LDO49_RS10440;Dbxref=GenBank:WP_021164156.1;Name=WP_021164156.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402757.1;locus_tag=LDO49_RS10440;product=flagellar basal body rod protein FlgC;protein_id=WP_021164156.1;transl_table=11 NZ_CAJZAV010000060.1 RefSeq pseudogene 6136 6401 . - . ID=gene-LDO49_RS10445;Name=flgB;end_range=6401,.;gbkey=Gene;gene=flgB;gene_biotype=pseudogene;locus_tag=LDO49_RS10445;old_locus_tag=BCEP4_1520009;partial=true;pseudo=true NZ_CAJZAV010000060.1 Protein Homology CDS 6136 6401 . - 2 ID=cds-LDO49_RS10445;Parent=gene-LDO49_RS10445;Note=with FlgF and C makes up the proximal portion of the flagellar basal body rod%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=6401,.;gbkey=CDS;gene=flgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329388.1;locus_tag=LDO49_RS10445;partial=true;product=flagellar basal body rod protein FlgB;pseudo=true;transl_table=11 NZ_CAJZAV010000060.1 RefSeq pseudogene 6412 6499 . - . ID=gene-LDO49_RS37930;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=pseudogene;locus_tag=LDO49_RS37930;partial=true;pseudo=true;start_range=.,6412 NZ_CAJZAV010000060.1 Protein Homology CDS 6412 6499 . - 0 ID=cds-LDO49_RS37930;Parent=gene-LDO49_RS37930;Note=with FlgF and C makes up the proximal portion of the flagellar basal body rod%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=flgB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477559.1;locus_tag=LDO49_RS37930;partial=true;product=flagellar basal body rod protein FlgB;pseudo=true;start_range=.,6412;transl_table=11 ##sequence-region NZ_CAJZAV010000061.1 1 41560 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000061.1 RefSeq region 1 41560 . + . ID=NZ_CAJZAV010000061.1:1..41560;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_153 NZ_CAJZAV010000061.1 RefSeq gene 1 693 . + . ID=gene-LDO49_RS10450;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=LDO49_RS10450;old_locus_tag=BCEP4_1530001;partial=true;start_range=.,1 NZ_CAJZAV010000061.1 Protein Homology CDS 1 693 . + 0 ID=cds-WP_224051709.1;Parent=gene-LDO49_RS10450;Dbxref=GenBank:WP_224051709.1;Name=WP_224051709.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353472.1;locus_tag=LDO49_RS10450;partial=true;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_224051709.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 812 1141 . + . ID=gene-LDO49_RS10455;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=LDO49_RS10455;old_locus_tag=BCEP4_1530002 NZ_CAJZAV010000061.1 Protein Homology CDS 812 1141 . + 0 ID=cds-WP_224051710.1;Parent=gene-LDO49_RS10455;Dbxref=GenBank:WP_224051710.1;Name=WP_224051710.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477558.1;locus_tag=LDO49_RS10455;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_224051710.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 1221 1661 . + . ID=gene-LDO49_RS10460;Name=LDO49_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10460;old_locus_tag=BCEP4_1530003 NZ_CAJZAV010000061.1 Protein Homology CDS 1221 1661 . + 0 ID=cds-WP_021163144.1;Parent=gene-LDO49_RS10460;Dbxref=GenBank:WP_021163144.1;Name=WP_021163144.1;Ontology_term=GO:0044780;gbkey=CDS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402753.1;locus_tag=LDO49_RS10460;product=flagella synthesis protein FlgN;protein_id=WP_021163144.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 1878 3233 . + . ID=gene-LDO49_RS10465;Name=LDO49_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10465;old_locus_tag=BCEP4_1530004 NZ_CAJZAV010000061.1 Protein Homology CDS 1878 3233 . + 0 ID=cds-WP_224051712.1;Parent=gene-LDO49_RS10465;Dbxref=GenBank:WP_224051712.1;Name=WP_224051712.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353475.1;locus_tag=LDO49_RS10465;product=SGNH/GDSL hydrolase family protein;protein_id=WP_224051712.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 3253 5103 . - . ID=gene-LDO49_RS10470;Name=LDO49_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10470;old_locus_tag=BCEP4_1530005 NZ_CAJZAV010000061.1 Protein Homology CDS 3253 5103 . - 0 ID=cds-WP_224051714.1;Parent=gene-LDO49_RS10470;Dbxref=GenBank:WP_224051714.1;Name=WP_224051714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483179.1;locus_tag=LDO49_RS10470;product=M24 family metallopeptidase;protein_id=WP_224051714.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 5558 6343 . + . ID=gene-LDO49_RS10475;Name=LDO49_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10475;old_locus_tag=BCEP4_1530006 NZ_CAJZAV010000061.1 Protein Homology CDS 5558 6343 . + 0 ID=cds-WP_059483912.1;Parent=gene-LDO49_RS10475;Dbxref=GenBank:WP_059483912.1;Name=WP_059483912.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546421.1;locus_tag=LDO49_RS10475;product=helix-turn-helix domain-containing protein;protein_id=WP_059483912.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 6431 7672 . - . ID=gene-LDO49_RS10480;Name=LDO49_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10480;old_locus_tag=BCEP4_1530007 NZ_CAJZAV010000061.1 Protein Homology CDS 6431 7672 . - 0 ID=cds-WP_059483924.1;Parent=gene-LDO49_RS10480;Dbxref=GenBank:WP_059483924.1;Name=WP_059483924.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353478.1;locus_tag=LDO49_RS10480;product=multifunctional CCA addition/repair protein;protein_id=WP_059483924.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 7669 8316 . - . ID=gene-LDO49_RS10485;Name=LDO49_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10485;old_locus_tag=BCEP4_1530008 NZ_CAJZAV010000061.1 Protein Homology CDS 7669 8316 . - 0 ID=cds-WP_224051715.1;Parent=gene-LDO49_RS10485;Dbxref=GenBank:WP_224051715.1;Name=WP_224051715.1;Ontology_term=GO:0006749,GO:0004364;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895787.1;locus_tag=LDO49_RS10485;product=glutathione S-transferase family protein;protein_id=WP_224051715.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 8380 9339 . - . ID=gene-LDO49_RS10490;Name=LDO49_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10490;old_locus_tag=BCEP4_1530009 NZ_CAJZAV010000061.1 Protein Homology CDS 8380 9339 . - 0 ID=cds-WP_042977656.1;Parent=gene-LDO49_RS10490;Dbxref=GenBank:WP_042977656.1;Name=WP_042977656.1;Ontology_term=GO:0010257,GO:0022904,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=NADH dehydrogenase complex assembly|0010257||IEA,respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197236.1;locus_tag=LDO49_RS10490;product=complex I NDUFA9 subunit family protein;protein_id=WP_042977656.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 9397 11349 . - . ID=gene-LDO49_RS10495;Name=LDO49_RS10495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10495;old_locus_tag=BCEP4_1530010 NZ_CAJZAV010000061.1 Protein Homology CDS 9397 11349 . - 0 ID=cds-WP_048026618.1;Parent=gene-LDO49_RS10495;Dbxref=GenBank:WP_048026618.1;Name=WP_048026618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602139.1;locus_tag=LDO49_RS10495;product=lytic transglycosylase domain-containing protein;protein_id=WP_048026618.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 11358 11966 . + . ID=gene-LDO49_RS10500;Name=LDO49_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10500;old_locus_tag=BCEP4_1530011 NZ_CAJZAV010000061.1 Protein Homology CDS 11358 11966 . + 0 ID=cds-WP_224051717.1;Parent=gene-LDO49_RS10500;Dbxref=GenBank:WP_224051717.1;Name=WP_224051717.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353482.1;locus_tag=LDO49_RS10500;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_224051717.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 12063 12575 . - . ID=gene-LDO49_RS10505;Name=LDO49_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10505;old_locus_tag=BCEP4_1530012 NZ_CAJZAV010000061.1 Protein Homology CDS 12063 12575 . - 0 ID=cds-WP_039354820.1;Parent=gene-LDO49_RS10505;Dbxref=GenBank:WP_039354820.1;Name=WP_039354820.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024208.1;locus_tag=LDO49_RS10505;product=winged helix DNA-binding protein;protein_id=WP_039354820.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 12724 13380 . + . ID=gene-LDO49_RS10510;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=LDO49_RS10510;old_locus_tag=BCEP4_1530013 NZ_CAJZAV010000061.1 Protein Homology CDS 12724 13380 . + 0 ID=cds-WP_224051718.1;Parent=gene-LDO49_RS10510;Dbxref=GenBank:WP_224051718.1;Name=WP_224051718.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329397.1;locus_tag=LDO49_RS10510;product=5-oxoprolinase subunit PxpB;protein_id=WP_224051718.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 13377 14444 . + . ID=gene-LDO49_RS10515;Name=LDO49_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10515;old_locus_tag=BCEP4_1530014 NZ_CAJZAV010000061.1 Protein Homology CDS 13377 14444 . + 0 ID=cds-WP_060157175.1;Parent=gene-LDO49_RS10515;Dbxref=GenBank:WP_060157175.1;Name=WP_060157175.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886276.1;locus_tag=LDO49_RS10515;product=biotin-dependent carboxyltransferase family protein;protein_id=WP_060157175.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 14515 15279 . + . ID=gene-LDO49_RS10520;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=LDO49_RS10520;old_locus_tag=BCEP4_1530015 NZ_CAJZAV010000061.1 Protein Homology CDS 14515 15279 . + 0 ID=cds-WP_224051719.1;Parent=gene-LDO49_RS10520;Dbxref=GenBank:WP_224051719.1;Name=WP_224051719.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886277.1;locus_tag=LDO49_RS10520;product=5-oxoprolinase subunit PxpA;protein_id=WP_224051719.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq pseudogene 15466 15704 . - . ID=gene-LDO49_RS10525;Name=LDO49_RS10525;end_range=15704,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS10525;partial=true;pseudo=true NZ_CAJZAV010000061.1 Protein Homology CDS 15466 15704 . - 0 ID=cds-LDO49_RS10525;Parent=gene-LDO49_RS10525;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=15704,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024208.1;locus_tag=LDO49_RS10525;partial=true;product=winged helix DNA-binding protein;pseudo=true;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 16320 16586 . + . ID=gene-LDO49_RS10530;Name=LDO49_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10530;old_locus_tag=BCEP4_1530019 NZ_CAJZAV010000061.1 GeneMarkS-2+ CDS 16320 16586 . + 0 ID=cds-WP_060073947.1;Parent=gene-LDO49_RS10530;Dbxref=GenBank:WP_060073947.1;Name=WP_060073947.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS10530;product=hypothetical protein;protein_id=WP_060073947.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 16932 17648 . - . ID=gene-LDO49_RS10535;Name=LDO49_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10535;old_locus_tag=BCEP4_1530020 NZ_CAJZAV010000061.1 Protein Homology CDS 16932 17648 . - 0 ID=cds-WP_060073949.1;Parent=gene-LDO49_RS10535;Dbxref=GenBank:WP_060073949.1;Name=WP_060073949.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415016.1;locus_tag=LDO49_RS10535;product=response regulator transcription factor;protein_id=WP_060073949.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 18100 18354 . - . ID=gene-LDO49_RS10540;Name=LDO49_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10540;old_locus_tag=BCEP4_1530021 NZ_CAJZAV010000061.1 GeneMarkS-2+ CDS 18100 18354 . - 0 ID=cds-WP_124469190.1;Parent=gene-LDO49_RS10540;Dbxref=GenBank:WP_124469190.1;Name=WP_124469190.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS10540;product=hypothetical protein;protein_id=WP_124469190.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 18454 19599 . - . ID=gene-LDO49_RS10545;Name=LDO49_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10545;old_locus_tag=BCEP4_1530022 NZ_CAJZAV010000061.1 Protein Homology CDS 18454 19599 . - 0 ID=cds-WP_021163771.1;Parent=gene-LDO49_RS10545;Dbxref=GenBank:WP_021163771.1;Name=WP_021163771.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895779.1;locus_tag=LDO49_RS10545;product=TraB/GumN family protein;protein_id=WP_021163771.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 19592 20608 . - . ID=gene-LDO49_RS10550;Name=LDO49_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10550;old_locus_tag=BCEP4_1530023 NZ_CAJZAV010000061.1 Protein Homology CDS 19592 20608 . - 0 ID=cds-WP_021163770.1;Parent=gene-LDO49_RS10550;Dbxref=GenBank:WP_021163770.1;Name=WP_021163770.1;Ontology_term=GO:0015833,GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523051.1;locus_tag=LDO49_RS10550;product=peptide ABC transporter ATP-binding protein;protein_id=WP_021163770.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 20605 21603 . - . ID=gene-LDO49_RS10555;Name=LDO49_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10555;old_locus_tag=BCEP4_1530024 NZ_CAJZAV010000061.1 Protein Homology CDS 20605 21603 . - 0 ID=cds-WP_021163769.1;Parent=gene-LDO49_RS10555;Dbxref=GenBank:WP_021163769.1;Name=WP_021163769.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477543.1;locus_tag=LDO49_RS10555;product=ABC transporter ATP-binding protein;protein_id=WP_021163769.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 21605 22522 . - . ID=gene-LDO49_RS10560;Name=LDO49_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10560;old_locus_tag=BCEP4_1530025 NZ_CAJZAV010000061.1 Protein Homology CDS 21605 22522 . - 0 ID=cds-WP_021163768.1;Parent=gene-LDO49_RS10560;Dbxref=GenBank:WP_021163768.1;Name=WP_021163768.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489141.1;locus_tag=LDO49_RS10560;product=ABC transporter permease subunit;protein_id=WP_021163768.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 22527 23537 . - . ID=gene-LDO49_RS10565;Name=LDO49_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10565;old_locus_tag=BCEP4_1530026 NZ_CAJZAV010000061.1 Protein Homology CDS 22527 23537 . - 0 ID=cds-WP_011353491.1;Parent=gene-LDO49_RS10565;Dbxref=GenBank:WP_011353491.1;Name=WP_011353491.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014192601.1;locus_tag=LDO49_RS10565;product=ABC transporter permease subunit;protein_id=WP_011353491.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 23648 25276 . - . ID=gene-LDO49_RS10570;Name=LDO49_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10570;old_locus_tag=BCEP4_1530027 NZ_CAJZAV010000061.1 Protein Homology CDS 23648 25276 . - 0 ID=cds-WP_021163767.1;Parent=gene-LDO49_RS10570;Dbxref=GenBank:WP_021163767.1;Name=WP_021163767.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417151.1;locus_tag=LDO49_RS10570;product=ABC transporter substrate-binding protein;protein_id=WP_021163767.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 25596 26903 . - . ID=gene-LDO49_RS10575;Name=LDO49_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10575;old_locus_tag=BCEP4_1530028 NZ_CAJZAV010000061.1 Protein Homology CDS 25596 26903 . - 0 ID=cds-WP_021163766.1;Parent=gene-LDO49_RS10575;Dbxref=GenBank:WP_021163766.1;Name=WP_021163766.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895773.1;locus_tag=LDO49_RS10575;product=MFS transporter;protein_id=WP_021163766.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 27095 27406 . - . ID=gene-LDO49_RS10580;Name=LDO49_RS10580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10580;old_locus_tag=BCEP4_1530030 NZ_CAJZAV010000061.1 Protein Homology CDS 27095 27406 . - 0 ID=cds-WP_021163765.1;Parent=gene-LDO49_RS10580;Dbxref=GenBank:WP_021163765.1;Name=WP_021163765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895772.1;locus_tag=LDO49_RS10580;product=high-potential iron-sulfur protein;protein_id=WP_021163765.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 27872 28981 . - . ID=gene-LDO49_RS10585;Name=LDO49_RS10585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10585;old_locus_tag=BCEP4_1530032 NZ_CAJZAV010000061.1 Protein Homology CDS 27872 28981 . - 0 ID=cds-WP_048026607.1;Parent=gene-LDO49_RS10585;Dbxref=GenBank:WP_048026607.1;Name=WP_048026607.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408781.1;locus_tag=LDO49_RS10585;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_048026607.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 29135 30115 . - . ID=gene-LDO49_RS10590;Name=LDO49_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10590;old_locus_tag=BCEP4_1530033 NZ_CAJZAV010000061.1 Protein Homology CDS 29135 30115 . - 0 ID=cds-WP_048026605.1;Parent=gene-LDO49_RS10590;Dbxref=GenBank:WP_048026605.1;Name=WP_048026605.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011857941.1;locus_tag=LDO49_RS10590;product=AAA family ATPase;protein_id=WP_048026605.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 30346 31065 . + . ID=gene-LDO49_RS10595;Name=LDO49_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10595;old_locus_tag=BCEP4_1530034 NZ_CAJZAV010000061.1 Protein Homology CDS 30346 31065 . + 0 ID=cds-WP_060073993.1;Parent=gene-LDO49_RS10595;Dbxref=GenBank:WP_060073993.1;Name=WP_060073993.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014972600.1;locus_tag=LDO49_RS10595;product=nitroreductase;protein_id=WP_060073993.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 31212 31700 . + . ID=gene-LDO49_RS10600;Name=LDO49_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10600;old_locus_tag=BCEP4_1530035 NZ_CAJZAV010000061.1 Protein Homology CDS 31212 31700 . + 0 ID=cds-WP_021163081.1;Parent=gene-LDO49_RS10600;Dbxref=GenBank:WP_021163081.1;Name=WP_021163081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546435.1;locus_tag=LDO49_RS10600;product=hypothetical protein;protein_id=WP_021163081.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 31706 32521 . + . ID=gene-LDO49_RS10605;Name=LDO49_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10605;old_locus_tag=BCEP4_1530036 NZ_CAJZAV010000061.1 Protein Homology CDS 31706 32521 . + 0 ID=cds-WP_021163082.1;Parent=gene-LDO49_RS10605;Dbxref=GenBank:WP_021163082.1;Name=WP_021163082.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353499.1;locus_tag=LDO49_RS10605;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_021163082.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 32678 33325 . + . ID=gene-LDO49_RS10610;Name=LDO49_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10610;old_locus_tag=BCEP4_1530037 NZ_CAJZAV010000061.1 Protein Homology CDS 32678 33325 . + 0 ID=cds-WP_224051720.1;Parent=gene-LDO49_RS10610;Dbxref=GenBank:WP_224051720.1;Name=WP_224051720.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534257.1;locus_tag=LDO49_RS10610;product=LysE family translocator;protein_id=WP_224051720.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 33560 34330 . + . ID=gene-LDO49_RS10615;Name=LDO49_RS10615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10615;old_locus_tag=BCEP4_1530038 NZ_CAJZAV010000061.1 Protein Homology CDS 33560 34330 . + 0 ID=cds-WP_027788896.1;Parent=gene-LDO49_RS10615;Dbxref=GenBank:WP_027788896.1;Name=WP_027788896.1;Ontology_term=GO:0004324;gbkey=CDS;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477532.1;locus_tag=LDO49_RS10615;product=ferredoxin--NADP reductase;protein_id=WP_027788896.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 34746 35561 . + . ID=gene-LDO49_RS10620;Name=rqpS;gbkey=Gene;gene=rqpS;gene_biotype=protein_coding;locus_tag=LDO49_RS10620;old_locus_tag=BCEP4_1530041 NZ_CAJZAV010000061.1 Protein Homology CDS 34746 35561 . + 0 ID=cds-WP_042973076.1;Parent=gene-LDO49_RS10620;Dbxref=GenBank:WP_042973076.1;Name=WP_042973076.1;gbkey=CDS;gene=rqpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694433.1;locus_tag=LDO49_RS10620;product=quorum system sensor histidine kinase RqpS;protein_id=WP_042973076.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 35569 36225 . + . ID=gene-LDO49_RS10625;Name=rqpR;gbkey=Gene;gene=rqpR;gene_biotype=protein_coding;locus_tag=LDO49_RS10625;old_locus_tag=BCEP4_1530042 NZ_CAJZAV010000061.1 Protein Homology CDS 35569 36225 . + 0 ID=cds-WP_021157028.1;Parent=gene-LDO49_RS10625;Dbxref=GenBank:WP_021157028.1;Name=WP_021157028.1;Note=The RqpSR system (Regulating Quorum sensing and Pathogenicity Sensor kinase and Response regulator) co-occurs with and modulates the expression of cis-2-dodecenoic acid quorum-sensing systems.;gbkey=CDS;gene=rqpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477530.1;locus_tag=LDO49_RS10625;product=response regulator transcription factor RqpR;protein_id=WP_021157028.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 36458 37864 . + . ID=gene-LDO49_RS10630;Name=LDO49_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10630;old_locus_tag=BCEP4_1530043 NZ_CAJZAV010000061.1 Protein Homology CDS 36458 37864 . + 0 ID=cds-WP_059586873.1;Parent=gene-LDO49_RS10630;Dbxref=GenBank:WP_059586873.1;Name=WP_059586873.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334563.1;locus_tag=LDO49_RS10630;product=amino acid permease;protein_id=WP_059586873.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 38411 38914 . + . ID=gene-LDO49_RS10635;Name=LDO49_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10635;old_locus_tag=BCEP4_1530044 NZ_CAJZAV010000061.1 Protein Homology CDS 38411 38914 . + 0 ID=cds-WP_224051721.1;Parent=gene-LDO49_RS10635;Dbxref=GenBank:WP_224051721.1;Name=WP_224051721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353505.1;locus_tag=LDO49_RS10635;product=hypothetical protein;protein_id=WP_224051721.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 39125 40150 . + . ID=gene-LDO49_RS10640;Name=LDO49_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10640;old_locus_tag=BCEP4_1530045 NZ_CAJZAV010000061.1 Protein Homology CDS 39125 40150 . + 0 ID=cds-WP_027788892.1;Parent=gene-LDO49_RS10640;Dbxref=GenBank:WP_027788892.1;Name=WP_027788892.1;Ontology_term=GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534269.1;locus_tag=LDO49_RS10640;product=XdhC family protein;protein_id=WP_027788892.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 40255 40992 . - . ID=gene-LDO49_RS10645;Name=LDO49_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10645;old_locus_tag=BCEP4_1530046 NZ_CAJZAV010000061.1 Protein Homology CDS 40255 40992 . - 0 ID=cds-WP_021157024.1;Parent=gene-LDO49_RS10645;Dbxref=GenBank:WP_021157024.1;Name=WP_021157024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402716.1;locus_tag=LDO49_RS10645;product=PepSY-associated TM helix domain-containing protein;protein_id=WP_021157024.1;transl_table=11 NZ_CAJZAV010000061.1 RefSeq gene 41262 41560 . - . ID=gene-LDO49_RS10650;Name=LDO49_RS10650;end_range=41560,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10650;old_locus_tag=BCEP4_1530047;partial=true NZ_CAJZAV010000061.1 Protein Homology CDS 41262 41560 . - 2 ID=cds-WP_224051722.1;Parent=gene-LDO49_RS10650;Dbxref=GenBank:WP_224051722.1;Name=WP_224051722.1;Ontology_term=GO:0009306,GO:0016020;end_range=41560,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402715.1;locus_tag=LDO49_RS10650;partial=true;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;protein_id=WP_224051722.1;transl_table=11 ##sequence-region NZ_CAJZAV010000062.1 1 26037 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000062.1 RefSeq region 1 26037 . + . ID=NZ_CAJZAV010000062.1:1..26037;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_154 NZ_CAJZAV010000062.1 RefSeq pseudogene 232 402 . - . ID=gene-LDO49_RS10655;Name=LDO49_RS10655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS10655;old_locus_tag=BCEP4_1540002;partial=true;pseudo=true;start_range=.,232 NZ_CAJZAV010000062.1 Protein Homology CDS 232 402 . - 0 ID=cds-LDO49_RS10655;Parent=gene-LDO49_RS10655;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196180.1;locus_tag=LDO49_RS10655;partial=true;product=type VI secretion system baseplate subunit TssF;pseudo=true;start_range=.,232;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 419 847 . - . ID=gene-LDO49_RS10660;Name=LDO49_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10660 NZ_CAJZAV010000062.1 Protein Homology CDS 419 847 . - 0 ID=cds-WP_060073351.1;Parent=gene-LDO49_RS10660;Dbxref=GenBank:WP_060073351.1;Name=WP_060073351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603140.1;locus_tag=LDO49_RS10660;product=GPW/gp25 family protein;protein_id=WP_060073351.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 925 1452 . - . ID=gene-LDO49_RS10665;Name=LDO49_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10665;old_locus_tag=BCEP4_1540004 NZ_CAJZAV010000062.1 Protein Homology CDS 925 1452 . - 0 ID=cds-WP_060073316.1;Parent=gene-LDO49_RS10665;Dbxref=GenBank:WP_060073316.1;Name=WP_060073316.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530039.1;locus_tag=LDO49_RS10665;product=Hcp family type VI secretion system effector;protein_id=WP_060073316.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 1464 2006 . - . ID=gene-LDO49_RS10670;Name=LDO49_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10670 NZ_CAJZAV010000062.1 Protein Homology CDS 1464 2006 . - 0 ID=cds-WP_124475979.1;Parent=gene-LDO49_RS10670;Dbxref=GenBank:WP_124475979.1;Name=WP_124475979.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024751.6;locus_tag=LDO49_RS10670;product=transposase;protein_id=WP_124475979.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 1921 2541 . - . ID=gene-LDO49_RS10675;Name=LDO49_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10675;old_locus_tag=BCEP4_1540006 NZ_CAJZAV010000062.1 GeneMarkS-2+ CDS 1921 2541 . - 0 ID=cds-WP_063811985.1;Parent=gene-LDO49_RS10675;Dbxref=GenBank:WP_063811985.1;Name=WP_063811985.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS10675;product=helix-turn-helix domain-containing protein;protein_id=WP_063811985.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq pseudogene 2873 3122 . - . ID=gene-LDO49_RS10680;Name=LDO49_RS10680;end_range=3122,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS10680;partial=true;pseudo=true NZ_CAJZAV010000062.1 Protein Homology CDS 2873 3122 . - 0 ID=cds-LDO49_RS10680;Parent=gene-LDO49_RS10680;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3122,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700100.1;locus_tag=LDO49_RS10680;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 3406 3549 . + . ID=gene-LDO49_RS10685;Name=LDO49_RS10685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10685;old_locus_tag=BCEP4_1540009 NZ_CAJZAV010000062.1 GeneMarkS-2+ CDS 3406 3549 . + 0 ID=cds-WP_185633981.1;Parent=gene-LDO49_RS10685;Dbxref=GenBank:WP_185633981.1;Name=WP_185633981.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS10685;product=hypothetical protein;protein_id=WP_185633981.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 3611 3796 . + . ID=gene-LDO49_RS10690;Name=LDO49_RS10690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10690;old_locus_tag=BCEP4_1540010 NZ_CAJZAV010000062.1 GeneMarkS-2+ CDS 3611 3796 . + 0 ID=cds-WP_060073319.1;Parent=gene-LDO49_RS10690;Dbxref=GenBank:WP_060073319.1;Name=WP_060073319.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS10690;product=hypothetical protein;protein_id=WP_060073319.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 4345 5820 . + . ID=gene-LDO49_RS10695;Name=LDO49_RS10695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10695;old_locus_tag=BCEP4_1540012 NZ_CAJZAV010000062.1 Protein Homology CDS 4345 5820 . + 0 ID=cds-WP_060073321.1;Parent=gene-LDO49_RS10695;Dbxref=GenBank:WP_060073321.1;Name=WP_060073321.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328503.1;locus_tag=LDO49_RS10695;product=MFS transporter;protein_id=WP_060073321.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 6022 6783 . - . ID=gene-LDO49_RS10700;Name=LDO49_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10700;old_locus_tag=BCEP4_1540013 NZ_CAJZAV010000062.1 Protein Homology CDS 6022 6783 . - 0 ID=cds-WP_060073323.1;Parent=gene-LDO49_RS10700;Dbxref=GenBank:WP_060073323.1;Name=WP_060073323.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497138.1;locus_tag=LDO49_RS10700;product=O-methyltransferase;protein_id=WP_060073323.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 6888 7184 . - . ID=gene-LDO49_RS10705;Name=LDO49_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10705;old_locus_tag=BCEP4_1540014 NZ_CAJZAV010000062.1 Protein Homology CDS 6888 7184 . - 0 ID=cds-WP_059488551.1;Parent=gene-LDO49_RS10705;Dbxref=GenBank:WP_059488551.1;Name=WP_059488551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328971.1;locus_tag=LDO49_RS10705;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_059488551.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 7187 7495 . - . ID=gene-LDO49_RS10710;Name=LDO49_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10710;old_locus_tag=BCEP4_1540015 NZ_CAJZAV010000062.1 Protein Homology CDS 7187 7495 . - 0 ID=cds-WP_021159616.1;Parent=gene-LDO49_RS10710;Dbxref=GenBank:WP_021159616.1;Name=WP_021159616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013092676.1;locus_tag=LDO49_RS10710;product=hypothetical protein;protein_id=WP_021159616.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 7508 8065 . - . ID=gene-LDO49_RS10715;Name=LDO49_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10715;old_locus_tag=BCEP4_1540017 NZ_CAJZAV010000062.1 Protein Homology CDS 7508 8065 . - 0 ID=cds-WP_060073326.1;Parent=gene-LDO49_RS10715;Dbxref=GenBank:WP_060073326.1;Name=WP_060073326.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018433342.1;locus_tag=LDO49_RS10715;product=RNA polymerase sigma factor;protein_id=WP_060073326.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 8578 9471 . - . ID=gene-LDO49_RS10720;Name=LDO49_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10720;old_locus_tag=BCEP4_1540018 NZ_CAJZAV010000062.1 Protein Homology CDS 8578 9471 . - 0 ID=cds-WP_060073328.1;Parent=gene-LDO49_RS10720;Dbxref=GenBank:WP_060073328.1;Name=WP_060073328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764304.1;locus_tag=LDO49_RS10720;product=LysR family transcriptional regulator;protein_id=WP_060073328.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 9586 10413 . - . ID=gene-LDO49_RS10725;Name=LDO49_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10725;old_locus_tag=BCEP4_1540019 NZ_CAJZAV010000062.1 Protein Homology CDS 9586 10413 . - 0 ID=cds-WP_021159619.1;Parent=gene-LDO49_RS10725;Dbxref=GenBank:WP_021159619.1;Name=WP_021159619.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545426.1;locus_tag=LDO49_RS10725;product=alpha/beta hydrolase;protein_id=WP_021159619.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 10665 11048 . - . ID=gene-LDO49_RS10730;Name=LDO49_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10730;old_locus_tag=BCEP4_1540020 NZ_CAJZAV010000062.1 Protein Homology CDS 10665 11048 . - 0 ID=cds-WP_027787387.1;Parent=gene-LDO49_RS10730;Dbxref=GenBank:WP_027787387.1;Name=WP_027787387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332064.1;locus_tag=LDO49_RS10730;product=VOC family protein;protein_id=WP_027787387.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 11071 12033 . - . ID=gene-LDO49_RS10735;Name=LDO49_RS10735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10735;old_locus_tag=BCEP4_1540021 NZ_CAJZAV010000062.1 Protein Homology CDS 11071 12033 . - 0 ID=cds-WP_060073330.1;Parent=gene-LDO49_RS10735;Dbxref=GenBank:WP_060073330.1;Name=WP_060073330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897008.1;locus_tag=LDO49_RS10735;product=hydroxymethylglutaryl-CoA lyase;protein_id=WP_060073330.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 12056 13246 . - . ID=gene-LDO49_RS10740;Name=LDO49_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10740;old_locus_tag=BCEP4_1540022 NZ_CAJZAV010000062.1 Protein Homology CDS 12056 13246 . - 0 ID=cds-WP_224051724.1;Parent=gene-LDO49_RS10740;Dbxref=GenBank:WP_224051724.1;Name=WP_224051724.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099758.1;locus_tag=LDO49_RS10740;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_224051724.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq pseudogene 13500 14464 . + . ID=gene-LDO49_RS10745;Name=LDO49_RS10745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS10745;old_locus_tag=BCEP4_1540023;pseudo=true NZ_CAJZAV010000062.1 Protein Homology CDS 13500 14464 . + 0 ID=cds-LDO49_RS10745;Parent=gene-LDO49_RS10745;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328498.1;locus_tag=LDO49_RS10745;product=D-2-hydroxyacid dehydrogenase;pseudo=true;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 14772 14984 . - . ID=gene-LDO49_RS10750;Name=LDO49_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10750;old_locus_tag=BCEP4_1540024 NZ_CAJZAV010000062.1 Protein Homology CDS 14772 14984 . - 0 ID=cds-WP_006497261.1;Parent=gene-LDO49_RS10750;Dbxref=GenBank:WP_006497261.1;Name=WP_006497261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213326.1;locus_tag=LDO49_RS10750;product=hypothetical protein;protein_id=WP_006497261.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 15368 15805 . - . ID=gene-LDO49_RS10755;Name=LDO49_RS10755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10755;old_locus_tag=BCEP4_1540025 NZ_CAJZAV010000062.1 Protein Homology CDS 15368 15805 . - 0 ID=cds-WP_059588268.1;Parent=gene-LDO49_RS10755;Dbxref=GenBank:WP_059588268.1;Name=WP_059588268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757918.1;locus_tag=LDO49_RS10755;product=hypothetical protein;protein_id=WP_059588268.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 15918 16841 . - . ID=gene-LDO49_RS10760;Name=LDO49_RS10760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10760;old_locus_tag=BCEP4_1540026 NZ_CAJZAV010000062.1 Protein Homology CDS 15918 16841 . - 0 ID=cds-WP_059653177.1;Parent=gene-LDO49_RS10760;Dbxref=GenBank:WP_059653177.1;Name=WP_059653177.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476007.1;locus_tag=LDO49_RS10760;product=ABC transporter permease;protein_id=WP_059653177.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 16841 17713 . - . ID=gene-LDO49_RS10765;Name=LDO49_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10765;old_locus_tag=BCEP4_1540027 NZ_CAJZAV010000062.1 Protein Homology CDS 16841 17713 . - 0 ID=cds-WP_224051725.1;Parent=gene-LDO49_RS10765;Dbxref=GenBank:WP_224051725.1;Name=WP_224051725.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332056.1;locus_tag=LDO49_RS10765;product=ABC transporter permease;protein_id=WP_224051725.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 17760 18839 . - . ID=gene-LDO49_RS10770;Name=LDO49_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10770;old_locus_tag=BCEP4_1540028 NZ_CAJZAV010000062.1 Protein Homology CDS 17760 18839 . - 0 ID=cds-WP_059495973.1;Parent=gene-LDO49_RS10770;Dbxref=GenBank:WP_059495973.1;Name=WP_059495973.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497264.1;locus_tag=LDO49_RS10770;product=ABC transporter ATP-binding protein;protein_id=WP_059495973.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 18889 20055 . - . ID=gene-LDO49_RS10775;Name=LDO49_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10775;old_locus_tag=BCEP4_1540029 NZ_CAJZAV010000062.1 Protein Homology CDS 18889 20055 . - 0 ID=cds-WP_059677727.1;Parent=gene-LDO49_RS10775;Dbxref=GenBank:WP_059677727.1;Name=WP_059677727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545418.1;locus_tag=LDO49_RS10775;product=extracellular solute-binding protein;protein_id=WP_059677727.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 20644 21237 . - . ID=gene-LDO49_RS10780;Name=LDO49_RS10780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10780;old_locus_tag=BCEP4_1540031 NZ_CAJZAV010000062.1 Protein Homology CDS 20644 21237 . - 0 ID=cds-WP_224051726.1;Parent=gene-LDO49_RS10780;Dbxref=GenBank:WP_224051726.1;Name=WP_224051726.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757912.1;locus_tag=LDO49_RS10780;product=RBBP9/YdeN family alpha/beta hydrolase;protein_id=WP_224051726.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 21254 22618 . - . ID=gene-LDO49_RS10785;Name=LDO49_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10785;old_locus_tag=BCEP4_1540032 NZ_CAJZAV010000062.1 Protein Homology CDS 21254 22618 . - 0 ID=cds-WP_224051727.1;Parent=gene-LDO49_RS10785;Dbxref=GenBank:WP_224051727.1;Name=WP_224051727.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363902.1;locus_tag=LDO49_RS10785;product=MFS transporter;protein_id=WP_224051727.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 22806 23861 . - . ID=gene-LDO49_RS10790;Name=LDO49_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10790;old_locus_tag=BCEP4_1540033 NZ_CAJZAV010000062.1 Protein Homology CDS 22806 23861 . - 0 ID=cds-WP_021159631.1;Parent=gene-LDO49_RS10790;Dbxref=GenBank:WP_021159631.1;Name=WP_021159631.1;Ontology_term=GO:0019475,GO:0043720,GO:0046872;gbkey=CDS;go_function=3-keto-5-aminohexanoate cleavage activity|0043720||IEA,metal ion binding|0046872||IEA;go_process=L-lysine fermentation|0019475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351996.1;locus_tag=LDO49_RS10790;product=3-keto-5-aminohexanoate cleavage protein;protein_id=WP_021159631.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 23980 24828 . - . ID=gene-LDO49_RS10795;Name=LDO49_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10795;old_locus_tag=BCEP4_1540034 NZ_CAJZAV010000062.1 Protein Homology CDS 23980 24828 . - 0 ID=cds-WP_021159632.1;Parent=gene-LDO49_RS10795;Dbxref=GenBank:WP_021159632.1;Name=WP_021159632.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553974.1;locus_tag=LDO49_RS10795;product=TauD/TfdA dioxygenase family protein;protein_id=WP_021159632.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq gene 24839 25819 . - . ID=gene-LDO49_RS10800;Name=LDO49_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10800;old_locus_tag=BCEP4_1540035 NZ_CAJZAV010000062.1 Protein Homology CDS 24839 25819 . - 0 ID=cds-WP_060073337.1;Parent=gene-LDO49_RS10800;Dbxref=GenBank:WP_060073337.1;Name=WP_060073337.1;Ontology_term=GO:0003960,GO:0070402;gbkey=CDS;go_function=quinone reductase (NADPH) activity|0003960||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656872.1;locus_tag=LDO49_RS10800;product=quinone oxidoreductase family protein;protein_id=WP_060073337.1;transl_table=11 NZ_CAJZAV010000062.1 RefSeq pseudogene 25838 26037 . - . ID=gene-LDO49_RS10805;Name=LDO49_RS10805;end_range=26037,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS10805;old_locus_tag=BCEP4_1540036;partial=true;pseudo=true NZ_CAJZAV010000062.1 Protein Homology CDS 25838 26037 . - 2 ID=cds-LDO49_RS10805;Parent=gene-LDO49_RS10805;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=26037,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492621.1;locus_tag=LDO49_RS10805;partial=true;product=universal stress protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000063.1 1 18982 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000063.1 RefSeq region 1 18982 . + . ID=NZ_CAJZAV010000063.1:1..18982;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_155 NZ_CAJZAV010000063.1 RefSeq gene 1 664 . - . ID=gene-LDO49_RS10810;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=LDO49_RS10810;partial=true;start_range=.,1 NZ_CAJZAV010000063.1 Protein Homology CDS 1 664 . - 0 ID=cds-WP_224051730.1;Parent=gene-LDO49_RS10810;Dbxref=GenBank:WP_224051730.1;Name=WP_224051730.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004549253.1;locus_tag=LDO49_RS10810;partial=true;product=selenocysteine-specific translation elongation factor;protein_id=WP_224051730.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000063.1 RefSeq gene 661 2100 . - . ID=gene-LDO49_RS10815;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=LDO49_RS10815;old_locus_tag=BCEP4_1550002 NZ_CAJZAV010000063.1 Protein Homology CDS 661 2100 . - 0 ID=cds-WP_042977439.1;Parent=gene-LDO49_RS10815;Dbxref=GenBank:WP_042977439.1;Name=WP_042977439.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853592.1;locus_tag=LDO49_RS10815;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_042977439.1;transl_table=11 NZ_CAJZAV010000063.1 RefSeq gene 2174 3109 . - . ID=gene-LDO49_RS10820;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=LDO49_RS10820;old_locus_tag=BCEP4_1550003 NZ_CAJZAV010000063.1 Protein Homology CDS 2174 3109 . - 0 ID=cds-WP_175851567.1;Parent=gene-LDO49_RS10820;Dbxref=GenBank:WP_175851567.1;Name=WP_175851567.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467868.1;locus_tag=LDO49_RS10820;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_175851567.1;transl_table=11 NZ_CAJZAV010000063.1 RefSeq gene 3219 3845 . - . ID=gene-LDO49_RS10825;Name=LDO49_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10825;old_locus_tag=BCEP4_1550004 NZ_CAJZAV010000063.1 Protein Homology CDS 3219 3845 . - 0 ID=cds-WP_060071484.1;Parent=gene-LDO49_RS10825;Dbxref=GenBank:WP_060071484.1;Name=WP_060071484.1;Ontology_term=GO:0009061,GO:0008863,GO:0009055,GO:0009326;gbkey=CDS;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415371.1;locus_tag=LDO49_RS10825;product=formate dehydrogenase subunit gamma;protein_id=WP_060071484.1;transl_table=11 NZ_CAJZAV010000063.1 RefSeq gene 3842 4756 . - . ID=gene-LDO49_RS10830;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=LDO49_RS10830;old_locus_tag=BCEP4_1550005 NZ_CAJZAV010000063.1 Protein Homology CDS 3842 4756 . - 0 ID=cds-WP_021162865.1;Parent=gene-LDO49_RS10830;Dbxref=GenBank:WP_021162865.1;Name=WP_021162865.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019256332.1;locus_tag=LDO49_RS10830;product=formate dehydrogenase subunit beta;protein_id=WP_021162865.1;transl_table=11 NZ_CAJZAV010000063.1 RefSeq gene 4767 7838 . - . ID=gene-LDO49_RS10835;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=LDO49_RS10835;old_locus_tag=BCEP4_1550006 NZ_CAJZAV010000063.1 Protein Homology CDS 4767 7838 . - 0 ID=cds-WP_081056026.1;Parent=gene-LDO49_RS10835;Dbxref=GenBank:WP_081056026.1;Name=WP_081056026.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004528945.1;locus_tag=LDO49_RS10835;product=formate dehydrogenase-N subunit alpha;protein_id=WP_081056026.1;transl_except=(pos:complement(7248..7250)%2Caa:Sec);transl_table=11 NZ_CAJZAV010000063.1 RefSeq gene 7981 8913 . + . ID=gene-LDO49_RS10840;Name=LDO49_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10840;old_locus_tag=BCEP4_1550008 NZ_CAJZAV010000063.1 Protein Homology CDS 7981 8913 . + 0 ID=cds-WP_060071481.1;Parent=gene-LDO49_RS10840;Dbxref=GenBank:WP_060071481.1;Name=WP_060071481.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365711.1;locus_tag=LDO49_RS10840;product=YihY/virulence factor BrkB family protein;protein_id=WP_060071481.1;transl_table=11 NZ_CAJZAV010000063.1 RefSeq gene 9317 10480 . + . ID=gene-LDO49_RS10845;Name=LDO49_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10845;old_locus_tag=BCEP4_1550011 NZ_CAJZAV010000063.1 Protein Homology CDS 9317 10480 . + 0 ID=cds-WP_060071477.1;Parent=gene-LDO49_RS10845;Dbxref=GenBank:WP_060071477.1;Name=WP_060071477.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603832.1;locus_tag=LDO49_RS10845;product=porin;protein_id=WP_060071477.1;transl_table=11 NZ_CAJZAV010000063.1 RefSeq gene 10866 11339 . + . ID=gene-LDO49_RS10850;Name=LDO49_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10850;old_locus_tag=BCEP4_1550012 NZ_CAJZAV010000063.1 Protein Homology CDS 10866 11339 . + 0 ID=cds-WP_060071474.1;Parent=gene-LDO49_RS10850;Dbxref=GenBank:WP_060071474.1;Name=WP_060071474.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365709.1;locus_tag=LDO49_RS10850;product=VOC family protein;protein_id=WP_060071474.1;transl_table=11 NZ_CAJZAV010000063.1 RefSeq gene 11468 12280 . - . ID=gene-LDO49_RS10855;Name=LDO49_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10855;old_locus_tag=BCEP4_1550013 NZ_CAJZAV010000063.1 Protein Homology CDS 11468 12280 . - 0 ID=cds-WP_042977427.1;Parent=gene-LDO49_RS10855;Dbxref=GenBank:WP_042977427.1;Name=WP_042977427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018904725.1;locus_tag=LDO49_RS10855;product=AadA family aminoglycoside 3''-O-nucleotidyltransferase;protein_id=WP_042977427.1;transl_table=11 NZ_CAJZAV010000063.1 RefSeq gene 12562 13011 . - . ID=gene-LDO49_RS10860;Name=LDO49_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10860;old_locus_tag=BCEP4_1550014 NZ_CAJZAV010000063.1 Protein Homology CDS 12562 13011 . - 0 ID=cds-WP_011355701.1;Parent=gene-LDO49_RS10860;Dbxref=GenBank:WP_011355701.1;Name=WP_011355701.1;Ontology_term=GO:0030261,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011400993.1;locus_tag=LDO49_RS10860;product=HU family DNA-binding protein;protein_id=WP_011355701.1;transl_table=11 NZ_CAJZAV010000063.1 RefSeq gene 13269 14387 . + . ID=gene-LDO49_RS10865;Name=LDO49_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10865;old_locus_tag=BCEP4_1550015 NZ_CAJZAV010000063.1 Protein Homology CDS 13269 14387 . + 0 ID=cds-WP_060071470.1;Parent=gene-LDO49_RS10865;Dbxref=GenBank:WP_060071470.1;Name=WP_060071470.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365706.1;locus_tag=LDO49_RS10865;product=acyltransferase family protein;protein_id=WP_060071470.1;transl_table=11 NZ_CAJZAV010000063.1 RefSeq gene 14775 15662 . - . ID=gene-LDO49_RS10870;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=LDO49_RS10870;old_locus_tag=BCEP4_1550016 NZ_CAJZAV010000063.1 Protein Homology CDS 14775 15662 . - 0 ID=cds-WP_021162860.1;Parent=gene-LDO49_RS10870;Dbxref=GenBank:WP_021162860.1;Name=WP_021162860.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881778.1;locus_tag=LDO49_RS10870;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_021162860.1;transl_table=11 NZ_CAJZAV010000063.1 RefSeq gene 15893 16036 . - . ID=gene-LDO49_RS10875;Name=LDO49_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10875;old_locus_tag=BCEP4_1550018 NZ_CAJZAV010000063.1 Protein Homology CDS 15893 16036 . - 0 ID=cds-WP_006479318.1;Parent=gene-LDO49_RS10875;Dbxref=GenBank:WP_006479318.1;Name=WP_006479318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329973.1;locus_tag=LDO49_RS10875;product=hypothetical protein;protein_id=WP_006479318.1;transl_table=11 NZ_CAJZAV010000063.1 RefSeq gene 16254 17429 . + . ID=gene-LDO49_RS10880;Name=LDO49_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10880;old_locus_tag=BCEP4_1550019 NZ_CAJZAV010000063.1 Protein Homology CDS 16254 17429 . + 0 ID=cds-WP_124844515.1;Parent=gene-LDO49_RS10880;Dbxref=GenBank:WP_124844515.1;Name=WP_124844515.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404003.1;locus_tag=LDO49_RS10880;product=acyltransferase family protein;protein_id=WP_124844515.1;transl_table=11 NZ_CAJZAV010000063.1 RefSeq gene 17884 18982 . - . ID=gene-LDO49_RS10885;Name=LDO49_RS10885;end_range=18982,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10885;old_locus_tag=BCEP4_1550020;partial=true NZ_CAJZAV010000063.1 Protein Homology CDS 17884 18982 . - 1 ID=cds-WP_224051731.1;Parent=gene-LDO49_RS10885;Dbxref=GenBank:WP_224051731.1;Name=WP_224051731.1;Ontology_term=GO:0006486,GO:0016757;end_range=18982,.;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881775.1;locus_tag=LDO49_RS10885;partial=true;product=glycosyltransferase family 4 protein;protein_id=WP_224051731.1;transl_table=11 ##sequence-region NZ_CAJZAV010000064.1 1 808 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000064.1 RefSeq region 1 808 . + . ID=NZ_CAJZAV010000064.1:1..808;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_156 NZ_CAJZAV010000064.1 RefSeq gene 1 337 . + . ID=gene-LDO49_RS37935;Name=LDO49_RS37935;end_range=337,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37935;old_locus_tag=BCEP4_1560001;partial=true;start_range=.,1 NZ_CAJZAV010000064.1 Protein Homology CDS 1 337 . + 2 ID=cds-WP_443797938.1;Parent=gene-LDO49_RS37935;Dbxref=GenBank:WP_443797938.1;Name=WP_443797938.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;end_range=337,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017774051.1;locus_tag=LDO49_RS37935;partial=true;product=ABC transporter ATP-binding protein;protein_id=WP_443797938.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000064.1 RefSeq gene 348 806 . + . ID=gene-LDO49_RS37940;Name=LDO49_RS37940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37940;old_locus_tag=BCEP4_1560002;partial=true;start_range=.,348 NZ_CAJZAV010000064.1 Protein Homology CDS 348 806 . + 0 ID=cds-WP_443797937.1;Parent=gene-LDO49_RS37940;Dbxref=GenBank:WP_443797937.1;Name=WP_443797937.1;Ontology_term=GO:0055085,GO:0005524,GO:0022857,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017774051.1;locus_tag=LDO49_RS37940;partial=true;product=TOBE domain-containing protein;protein_id=WP_443797937.1;start_range=.,348;transl_table=11 ##sequence-region NZ_CAJZAV010000065.1 1 9363 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000065.1 RefSeq region 1 9363 . + . ID=NZ_CAJZAV010000065.1:1..9363;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_157 NZ_CAJZAV010000065.1 RefSeq pseudogene 1 632 . + . ID=gene-LDO49_RS10895;Name=LDO49_RS10895;end_range=632,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS10895;old_locus_tag=BCEP4_1570001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000065.1 Protein Homology CDS 1 632 . + 2 ID=cds-LDO49_RS10895;Parent=gene-LDO49_RS10895;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=632,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405115.1;locus_tag=LDO49_RS10895;partial=true;product=malto-oligosyltrehalose synthase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000065.1 RefSeq gene 892 3291 . - . ID=gene-LDO49_RS10900;Name=LDO49_RS10900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10900;old_locus_tag=BCEP4_1570002 NZ_CAJZAV010000065.1 Protein Homology CDS 892 3291 . - 0 ID=cds-WP_060072113.1;Parent=gene-LDO49_RS10900;Dbxref=GenBank:WP_060072113.1;Name=WP_060072113.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339495.1;locus_tag=LDO49_RS10900;product=TonB-dependent receptor;protein_id=WP_060072113.1;transl_table=11 NZ_CAJZAV010000065.1 RefSeq gene 3722 5443 . + . ID=gene-LDO49_RS10905;Name=LDO49_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10905;old_locus_tag=BCEP4_1570004 NZ_CAJZAV010000065.1 Protein Homology CDS 3722 5443 . + 0 ID=cds-WP_021163956.1;Parent=gene-LDO49_RS10905;Dbxref=GenBank:WP_021163956.1;Name=WP_021163956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547059.1;locus_tag=LDO49_RS10905;product=methanol/ethanol family PQQ-dependent dehydrogenase;protein_id=WP_021163956.1;transl_table=11 NZ_CAJZAV010000065.1 RefSeq gene 5515 6756 . + . ID=gene-LDO49_RS10910;Name=LDO49_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10910;old_locus_tag=BCEP4_1570005 NZ_CAJZAV010000065.1 Protein Homology CDS 5515 6756 . + 0 ID=cds-WP_060072098.1;Parent=gene-LDO49_RS10910;Dbxref=GenBank:WP_060072098.1;Name=WP_060072098.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486133.1;locus_tag=LDO49_RS10910;product=c-type cytochrome;protein_id=WP_060072098.1;transl_table=11 NZ_CAJZAV010000065.1 RefSeq gene 6844 7158 . + . ID=gene-LDO49_RS10915;Name=LDO49_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10915;old_locus_tag=BCEP4_1570006 NZ_CAJZAV010000065.1 Protein Homology CDS 6844 7158 . + 0 ID=cds-WP_021163958.1;Parent=gene-LDO49_RS10915;Dbxref=GenBank:WP_021163958.1;Name=WP_021163958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547057.1;locus_tag=LDO49_RS10915;product=high-potential iron-sulfur protein;protein_id=WP_021163958.1;transl_table=11 NZ_CAJZAV010000065.1 RefSeq gene 7142 9061 . + . ID=gene-LDO49_RS10920;Name=LDO49_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10920;old_locus_tag=BCEP4_1570007 NZ_CAJZAV010000065.1 Protein Homology CDS 7142 9061 . + 0 ID=cds-WP_060072100.1;Parent=gene-LDO49_RS10920;Dbxref=GenBank:WP_060072100.1;Name=WP_060072100.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547056.1;locus_tag=LDO49_RS10920;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_060072100.1;transl_table=11 ##sequence-region NZ_CAJZAV010000066.1 1 46825 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000066.1 RefSeq region 1 46825 . + . ID=NZ_CAJZAV010000066.1:1..46825;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_158 NZ_CAJZAV010000066.1 RefSeq gene 1 594 . - . ID=gene-LDO49_RS10925;Name=LDO49_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10925;partial=true;start_range=.,1 NZ_CAJZAV010000066.1 Protein Homology CDS 1 594 . - 0 ID=cds-WP_224051735.1;Parent=gene-LDO49_RS10925;Dbxref=GenBank:WP_224051735.1;Name=WP_224051735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328642.1;locus_tag=LDO49_RS10925;partial=true;product=alpha/beta fold hydrolase;protein_id=WP_224051735.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 599 1603 . - . ID=gene-LDO49_RS10930;Name=LDO49_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10930;old_locus_tag=BCEP4_1580002 NZ_CAJZAV010000066.1 Protein Homology CDS 599 1603 . - 0 ID=cds-WP_048021073.1;Parent=gene-LDO49_RS10930;Dbxref=GenBank:WP_048021073.1;Name=WP_048021073.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364013.1;locus_tag=LDO49_RS10930;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_048021073.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 1658 2641 . - . ID=gene-LDO49_RS10935;Name=LDO49_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10935;old_locus_tag=BCEP4_1580003 NZ_CAJZAV010000066.1 Protein Homology CDS 1658 2641 . - 0 ID=cds-WP_021156490.1;Parent=gene-LDO49_RS10935;Dbxref=GenBank:WP_021156490.1;Name=WP_021156490.1;Ontology_term=GO:0016624,GO:0030976;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C disulfide as acceptor|0016624||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094295.1;locus_tag=LDO49_RS10935;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_021156490.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 2719 3495 . - . ID=gene-LDO49_RS10940;Name=LDO49_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10940;old_locus_tag=BCEP4_1580004 NZ_CAJZAV010000066.1 Protein Homology CDS 2719 3495 . - 0 ID=cds-WP_048021071.1;Parent=gene-LDO49_RS10940;Dbxref=GenBank:WP_048021071.1;Name=WP_048021071.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213237.1;locus_tag=LDO49_RS10940;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_048021071.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 3555 4613 . - . ID=gene-LDO49_RS10945;Name=LDO49_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10945;old_locus_tag=BCEP4_1580005 NZ_CAJZAV010000066.1 Protein Homology CDS 3555 4613 . - 0 ID=cds-WP_048021069.1;Parent=gene-LDO49_RS10945;Dbxref=GenBank:WP_048021069.1;Name=WP_048021069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657042.1;locus_tag=LDO49_RS10945;product=ATP-NAD kinase family protein;protein_id=WP_048021069.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 5149 7065 . + . ID=gene-LDO49_RS10950;Name=LDO49_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10950;old_locus_tag=BCEP4_1580006 NZ_CAJZAV010000066.1 Protein Homology CDS 5149 7065 . + 0 ID=cds-WP_224051737.1;Parent=gene-LDO49_RS10950;Dbxref=GenBank:WP_224051737.1;Name=WP_224051737.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492664.1;locus_tag=LDO49_RS10950;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_224051737.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 7091 7534 . - . ID=gene-LDO49_RS10955;Name=LDO49_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10955;old_locus_tag=BCEP4_1580007 NZ_CAJZAV010000066.1 Protein Homology CDS 7091 7534 . - 0 ID=cds-WP_059587871.1;Parent=gene-LDO49_RS10955;Dbxref=GenBank:WP_059587871.1;Name=WP_059587871.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478650.1;locus_tag=LDO49_RS10955;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_059587871.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 7518 7979 . - . ID=gene-LDO49_RS10960;Name=LDO49_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10960;old_locus_tag=BCEP4_1580008 NZ_CAJZAV010000066.1 Protein Homology CDS 7518 7979 . - 0 ID=cds-WP_069253591.1;Parent=gene-LDO49_RS10960;Dbxref=GenBank:WP_069253591.1;Name=WP_069253591.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484054.1;locus_tag=LDO49_RS10960;product=MerR family transcriptional regulator;protein_id=WP_069253591.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 8270 8881 . + . ID=gene-LDO49_RS10965;Name=LDO49_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10965;old_locus_tag=BCEP4_1580009 NZ_CAJZAV010000066.1 Protein Homology CDS 8270 8881 . + 0 ID=cds-WP_060157933.1;Parent=gene-LDO49_RS10965;Dbxref=GenBank:WP_060157933.1;Name=WP_060157933.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407809.1;locus_tag=LDO49_RS10965;product=ComEA family DNA-binding protein;protein_id=WP_060157933.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 8970 9401 . + . ID=gene-LDO49_RS10970;Name=LDO49_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10970;old_locus_tag=BCEP4_1580010 NZ_CAJZAV010000066.1 Protein Homology CDS 8970 9401 . + 0 ID=cds-WP_021156497.1;Parent=gene-LDO49_RS10970;Dbxref=GenBank:WP_021156497.1;Name=WP_021156497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332252.1;locus_tag=LDO49_RS10970;product=YidB family protein;protein_id=WP_021156497.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 9530 12127 . - . ID=gene-LDO49_RS10975;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=LDO49_RS10975;old_locus_tag=BCEP4_1580011 NZ_CAJZAV010000066.1 Protein Homology CDS 9530 12127 . - 0 ID=cds-WP_224051739.1;Parent=gene-LDO49_RS10975;Dbxref=GenBank:WP_224051739.1;Name=WP_224051739.1;Ontology_term=GO:0009408,GO:0042026,GO:0005737;gbkey=CDS;gene=clpB;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890767.1;locus_tag=LDO49_RS10975;product=ATP-dependent chaperone ClpB;protein_id=WP_224051739.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 12285 12803 . - . ID=gene-LDO49_RS10980;Name=LDO49_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10980;old_locus_tag=BCEP4_1580012 NZ_CAJZAV010000066.1 Protein Homology CDS 12285 12803 . - 0 ID=cds-WP_059553301.1;Parent=gene-LDO49_RS10980;Dbxref=GenBank:WP_059553301.1;Name=WP_059553301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764184.1;locus_tag=LDO49_RS10980;product=Rrf2 family transcriptional regulator;protein_id=WP_059553301.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 13056 13625 . + . ID=gene-LDO49_RS10985;Name=LDO49_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10985;old_locus_tag=BCEP4_1580013 NZ_CAJZAV010000066.1 Protein Homology CDS 13056 13625 . + 0 ID=cds-WP_224051740.1;Parent=gene-LDO49_RS10985;Dbxref=GenBank:WP_224051740.1;Name=WP_224051740.1;Ontology_term=GO:0005344,GO:0019825,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxygen carrier activity|0005344||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755404.1;locus_tag=LDO49_RS10985;product=group III truncated hemoglobin;protein_id=WP_224051740.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 13705 14181 . - . ID=gene-LDO49_RS10990;Name=LDO49_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS10990;old_locus_tag=BCEP4_1580014 NZ_CAJZAV010000066.1 Protein Homology CDS 13705 14181 . - 0 ID=cds-WP_224051742.1;Parent=gene-LDO49_RS10990;Dbxref=GenBank:WP_224051742.1;Name=WP_224051742.1;Ontology_term=GO:0006777,GO:0030366;gbkey=CDS;go_function=molybdopterin synthase activity|0030366||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549662.1;locus_tag=LDO49_RS10990;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_224051742.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 14192 14449 . - . ID=gene-LDO49_RS10995;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=LDO49_RS10995;old_locus_tag=BCEP4_1580015 NZ_CAJZAV010000066.1 Protein Homology CDS 14192 14449 . - 0 ID=cds-WP_011352296.1;Parent=gene-LDO49_RS10995;Dbxref=GenBank:WP_011352296.1;Name=WP_011352296.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115001.1;locus_tag=LDO49_RS10995;product=molybdopterin converting factor subunit 1;protein_id=WP_011352296.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 14469 15716 . - . ID=gene-LDO49_RS11000;Name=LDO49_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11000;old_locus_tag=BCEP4_1580016 NZ_CAJZAV010000066.1 Protein Homology CDS 14469 15716 . - 0 ID=cds-WP_059587865.1;Parent=gene-LDO49_RS11000;Dbxref=GenBank:WP_059587865.1;Name=WP_059587865.1;Ontology_term=GO:0006777,GO:0046872,GO:0061599;gbkey=CDS;go_function=metal ion binding|0046872||IEA,molybdopterin molybdotransferase activity|0061599||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013588484.1;locus_tag=LDO49_RS11000;product=molybdopterin molybdotransferase MoeA;protein_id=WP_059587865.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 15970 17421 . - . ID=gene-LDO49_RS11005;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=LDO49_RS11005;old_locus_tag=BCEP4_1580017 NZ_CAJZAV010000066.1 Protein Homology CDS 15970 17421 . - 0 ID=cds-WP_059651694.1;Parent=gene-LDO49_RS11005;Dbxref=GenBank:WP_059651694.1;Name=WP_059651694.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896870.1;locus_tag=LDO49_RS11005;product=threonine synthase;protein_id=WP_059651694.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 17436 18764 . - . ID=gene-LDO49_RS11010;Name=LDO49_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11010;old_locus_tag=BCEP4_1580018 NZ_CAJZAV010000066.1 Protein Homology CDS 17436 18764 . - 0 ID=cds-WP_021156505.1;Parent=gene-LDO49_RS11010;Dbxref=GenBank:WP_021156505.1;Name=WP_021156505.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482858.1;locus_tag=LDO49_RS11010;product=homoserine dehydrogenase;protein_id=WP_021156505.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 18817 20055 . - . ID=gene-LDO49_RS11015;Name=LDO49_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11015;old_locus_tag=BCEP4_1580019 NZ_CAJZAV010000066.1 Protein Homology CDS 18817 20055 . - 0 ID=cds-WP_224051744.1;Parent=gene-LDO49_RS11015;Dbxref=GenBank:WP_224051744.1;Name=WP_224051744.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890754.1;locus_tag=LDO49_RS11015;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_224051744.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 20372 20746 . + . ID=gene-LDO49_RS11020;Name=LDO49_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11020;old_locus_tag=BCEP4_1580020 NZ_CAJZAV010000066.1 Protein Homology CDS 20372 20746 . + 0 ID=cds-WP_021156508.1;Parent=gene-LDO49_RS11020;Dbxref=GenBank:WP_021156508.1;Name=WP_021156508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496387.1;locus_tag=LDO49_RS11020;product=Mth938-like domain-containing protein;protein_id=WP_021156508.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 20870 22546 . + . ID=gene-LDO49_RS11025;Name=LDO49_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11025;old_locus_tag=BCEP4_1580021 NZ_CAJZAV010000066.1 Protein Homology CDS 20870 22546 . + 0 ID=cds-WP_224051745.1;Parent=gene-LDO49_RS11025;Dbxref=GenBank:WP_224051745.1;Name=WP_224051745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364027.1;locus_tag=LDO49_RS11025;product=glycosyltransferase family 39 protein;protein_id=WP_224051745.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 22560 22931 . + . ID=gene-LDO49_RS11030;Name=LDO49_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11030;old_locus_tag=BCEP4_1580022 NZ_CAJZAV010000066.1 Protein Homology CDS 22560 22931 . + 0 ID=cds-WP_021156511.1;Parent=gene-LDO49_RS11030;Dbxref=GenBank:WP_021156511.1;Name=WP_021156511.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482863.1;locus_tag=LDO49_RS11030;product=EamA family transporter;protein_id=WP_021156511.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 23062 24213 . + . ID=gene-LDO49_RS11035;Name=LDO49_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11035;old_locus_tag=BCEP4_1580023 NZ_CAJZAV010000066.1 Protein Homology CDS 23062 24213 . + 0 ID=cds-WP_021156512.1;Parent=gene-LDO49_RS11035;Dbxref=GenBank:WP_021156512.1;Name=WP_021156512.1;Ontology_term=GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896864.1;locus_tag=LDO49_RS11035;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_021156512.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 24220 25257 . + . ID=gene-LDO49_RS11040;Name=LDO49_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11040;old_locus_tag=BCEP4_1580024 NZ_CAJZAV010000066.1 Protein Homology CDS 24220 25257 . + 0 ID=cds-WP_048021048.1;Parent=gene-LDO49_RS11040;Dbxref=GenBank:WP_048021048.1;Name=WP_048021048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496384.1;locus_tag=LDO49_RS11040;product=glycosyltransferase;protein_id=WP_048021048.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 25254 26201 . + . ID=gene-LDO49_RS11045;Name=LDO49_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11045;old_locus_tag=BCEP4_1580025 NZ_CAJZAV010000066.1 Protein Homology CDS 25254 26201 . + 0 ID=cds-WP_224051746.1;Parent=gene-LDO49_RS11045;Dbxref=GenBank:WP_224051746.1;Name=WP_224051746.1;Ontology_term=GO:0016742;gbkey=CDS;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004539650.1;locus_tag=LDO49_RS11045;product=formyltransferase;protein_id=WP_224051746.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 26198 27253 . + . ID=gene-LDO49_RS11050;Name=LDO49_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11050;old_locus_tag=BCEP4_1580026 NZ_CAJZAV010000066.1 Protein Homology CDS 26198 27253 . + 0 ID=cds-WP_006482864.1;Parent=gene-LDO49_RS11050;Dbxref=GenBank:WP_006482864.1;Name=WP_006482864.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352307.1;locus_tag=LDO49_RS11050;product=bifunctional UDP-4-keto-pentose/UDP-xylose synthase;protein_id=WP_006482864.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 27267 28163 . + . ID=gene-LDO49_RS11055;Name=LDO49_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11055;old_locus_tag=BCEP4_1580027 NZ_CAJZAV010000066.1 Protein Homology CDS 27267 28163 . + 0 ID=cds-WP_021156515.1;Parent=gene-LDO49_RS11055;Dbxref=GenBank:WP_021156515.1;Name=WP_021156515.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890738.1;locus_tag=LDO49_RS11055;product=polysaccharide deacetylase family protein;protein_id=WP_021156515.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 28272 28733 . + . ID=gene-LDO49_RS11060;Name=LDO49_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11060;old_locus_tag=BCEP4_1580028 NZ_CAJZAV010000066.1 Protein Homology CDS 28272 28733 . + 0 ID=cds-WP_011657063.1;Parent=gene-LDO49_RS11060;Dbxref=GenBank:WP_011657063.1;Name=WP_011657063.1;Ontology_term=GO:0008379,GO:0051920;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA,peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549652.1;locus_tag=LDO49_RS11060;product=peroxiredoxin;protein_id=WP_011657063.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq pseudogene 28932 29173 . - . ID=gene-LDO49_RS37375;Name=LDO49_RS37375;end_range=29173,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37375;partial=true;pseudo=true;start_range=.,28932 NZ_CAJZAV010000066.1 Protein Homology CDS 28932 29173 . - 0 ID=cds-LDO49_RS37375;Parent=gene-LDO49_RS37375;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=29173,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026209.1;locus_tag=LDO49_RS37375;partial=true;product=hypothetical protein;pseudo=true;start_range=.,28932;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 29069 30871 . + . ID=gene-LDO49_RS11065;Name=LDO49_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11065;old_locus_tag=BCEP4_1580029 NZ_CAJZAV010000066.1 Protein Homology CDS 29069 30871 . + 0 ID=cds-WP_042972757.1;Parent=gene-LDO49_RS11065;Dbxref=GenBank:WP_042972757.1;Name=WP_042972757.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694301.1;locus_tag=LDO49_RS11065;product=PhoH family protein;protein_id=WP_042972757.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 31111 32193 . + . ID=gene-LDO49_RS11070;Name=LDO49_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11070;old_locus_tag=BCEP4_1580030 NZ_CAJZAV010000066.1 Protein Homology CDS 31111 32193 . + 0 ID=cds-WP_224051747.1;Parent=gene-LDO49_RS11070;Dbxref=GenBank:WP_224051747.1;Name=WP_224051747.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549650.1;locus_tag=LDO49_RS11070;product=C40 family peptidase;protein_id=WP_224051747.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 32338 33348 . - . ID=gene-LDO49_RS11075;Name=LDO49_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11075;old_locus_tag=BCEP4_1580031 NZ_CAJZAV010000066.1 Protein Homology CDS 32338 33348 . - 0 ID=cds-WP_021156518.1;Parent=gene-LDO49_RS11075;Dbxref=GenBank:WP_021156518.1;Name=WP_021156518.1;Ontology_term=GO:0035435,GO:0005315,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=phosphate transmembrane transporter activity|0005315||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193771.1;locus_tag=LDO49_RS11075;product=inorganic phosphate transporter;protein_id=WP_021156518.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 33359 33985 . - . ID=gene-LDO49_RS11080;Name=LDO49_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11080;old_locus_tag=BCEP4_1580032 NZ_CAJZAV010000066.1 Protein Homology CDS 33359 33985 . - 0 ID=cds-WP_006478627.1;Parent=gene-LDO49_RS11080;Dbxref=GenBank:WP_006478627.1;Name=WP_006478627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698298.1;locus_tag=LDO49_RS11080;product=DUF47 domain-containing protein;protein_id=WP_006478627.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 34124 35506 . - . ID=gene-LDO49_RS11085;Name=LDO49_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11085;old_locus_tag=BCEP4_1580033 NZ_CAJZAV010000066.1 Protein Homology CDS 34124 35506 . - 0 ID=cds-WP_006486249.1;Parent=gene-LDO49_RS11085;Dbxref=GenBank:WP_006486249.1;Name=WP_006486249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192724.1;locus_tag=LDO49_RS11085;product=replicative DNA helicase;protein_id=WP_006486249.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 35642 36094 . - . ID=gene-LDO49_RS11090;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=LDO49_RS11090;old_locus_tag=BCEP4_1580034 NZ_CAJZAV010000066.1 Protein Homology CDS 35642 36094 . - 0 ID=cds-WP_021156519.1;Parent=gene-LDO49_RS11090;Dbxref=GenBank:WP_021156519.1;Name=WP_021156519.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402297.1;locus_tag=LDO49_RS11090;product=50S ribosomal protein L9;protein_id=WP_021156519.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 36122 36397 . - . ID=gene-LDO49_RS11095;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=LDO49_RS11095;old_locus_tag=BCEP4_1580035 NZ_CAJZAV010000066.1 Protein Homology CDS 36122 36397 . - 0 ID=cds-WP_006486248.1;Parent=gene-LDO49_RS11095;Dbxref=GenBank:WP_006486248.1;Name=WP_006486248.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017776738.1;locus_tag=LDO49_RS11095;product=30S ribosomal protein S18;protein_id=WP_006486248.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 36402 36701 . - . ID=gene-LDO49_RS11100;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=LDO49_RS11100;old_locus_tag=BCEP4_1580036 NZ_CAJZAV010000066.1 Protein Homology CDS 36402 36701 . - 0 ID=cds-WP_011657069.1;Parent=gene-LDO49_RS11100;Dbxref=GenBank:WP_011657069.1;Name=WP_011657069.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328667.1;locus_tag=LDO49_RS11100;product=primosomal replication protein N;protein_id=WP_011657069.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 36742 37116 . - . ID=gene-LDO49_RS11105;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=LDO49_RS11105;old_locus_tag=BCEP4_1580037 NZ_CAJZAV010000066.1 Protein Homology CDS 36742 37116 . - 0 ID=cds-WP_006402295.1;Parent=gene-LDO49_RS11105;Dbxref=GenBank:WP_006402295.1;Name=WP_006402295.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103105.1;locus_tag=LDO49_RS11105;product=30S ribosomal protein S6;protein_id=WP_006402295.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 37359 38255 . - . ID=gene-LDO49_RS11110;Name=LDO49_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11110;old_locus_tag=BCEP4_1580038 NZ_CAJZAV010000066.1 Protein Homology CDS 37359 38255 . - 0 ID=cds-WP_224051748.1;Parent=gene-LDO49_RS11110;Dbxref=GenBank:WP_224051748.1;Name=WP_224051748.1;Ontology_term=GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496378.1;locus_tag=LDO49_RS11110;product=anti-sigma factor family protein;protein_id=WP_224051748.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 38245 38886 . - . ID=gene-LDO49_RS11115;Name=LDO49_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11115;old_locus_tag=BCEP4_1580039 NZ_CAJZAV010000066.1 Protein Homology CDS 38245 38886 . - 0 ID=cds-WP_048021041.1;Parent=gene-LDO49_RS11115;Dbxref=GenBank:WP_048021041.1;Name=WP_048021041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017843817.1;locus_tag=LDO49_RS11115;product=RNA polymerase sigma factor;protein_id=WP_048021041.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 39049 39960 . - . ID=gene-LDO49_RS11120;Name=LDO49_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11120;old_locus_tag=BCEP4_1580040 NZ_CAJZAV010000066.1 Protein Homology CDS 39049 39960 . - 0 ID=cds-WP_021162120.1;Parent=gene-LDO49_RS11120;Dbxref=GenBank:WP_021162120.1;Name=WP_021162120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896849.1;locus_tag=LDO49_RS11120;product=substrate binding domain-containing protein;protein_id=WP_021162120.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 40133 41908 . + . ID=gene-LDO49_RS11125;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=LDO49_RS11125;old_locus_tag=BCEP4_1580041 NZ_CAJZAV010000066.1 Protein Homology CDS 40133 41908 . + 0 ID=cds-WP_224051749.1;Parent=gene-LDO49_RS11125;Dbxref=GenBank:WP_224051749.1;Name=WP_224051749.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896848.1;locus_tag=LDO49_RS11125;product=glyoxylate carboligase;protein_id=WP_224051749.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 41952 42761 . + . ID=gene-LDO49_RS11130;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=protein_coding;locus_tag=LDO49_RS11130;old_locus_tag=BCEP4_1580042 NZ_CAJZAV010000066.1 Protein Homology CDS 41952 42761 . + 0 ID=cds-WP_224051750.1;Parent=gene-LDO49_RS11130;Dbxref=GenBank:WP_224051750.1;Name=WP_224051750.1;gbkey=CDS;gene=hyi;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352319.1;locus_tag=LDO49_RS11130;product=hydroxypyruvate isomerase;protein_id=WP_224051750.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 42788 43693 . + . ID=gene-LDO49_RS11135;Name=LDO49_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11135;old_locus_tag=BCEP4_1580043 NZ_CAJZAV010000066.1 Protein Homology CDS 42788 43693 . + 0 ID=cds-WP_330744519.1;Parent=gene-LDO49_RS11135;Dbxref=GenBank:WP_330744519.1;Name=WP_330744519.1;Ontology_term=GO:0019580,GO:0008679;gbkey=CDS;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=galactarate metabolic process|0019580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407784.1;locus_tag=LDO49_RS11135;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_330744519.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 44177 44647 . + . ID=gene-LDO49_RS11140;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=LDO49_RS11140;old_locus_tag=BCEP4_1580045 NZ_CAJZAV010000066.1 Protein Homology CDS 44177 44647 . + 0 ID=cds-WP_021162125.1;Parent=gene-LDO49_RS11140;Dbxref=GenBank:WP_021162125.1;Name=WP_021162125.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890694.1;locus_tag=LDO49_RS11140;product=peptidoglycan-binding protein LysM;protein_id=WP_021162125.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 44753 45775 . - . ID=gene-LDO49_RS11145;Name=LDO49_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11145;old_locus_tag=BCEP4_1580046 NZ_CAJZAV010000066.1 Protein Homology CDS 44753 45775 . - 0 ID=cds-WP_059687388.1;Parent=gene-LDO49_RS11145;Dbxref=GenBank:WP_059687388.1;Name=WP_059687388.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755059.1;locus_tag=LDO49_RS11145;product=asparaginase;protein_id=WP_059687388.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq gene 46047 46337 . + . ID=gene-LDO49_RS11150;Name=LDO49_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11150;old_locus_tag=BCEP4_1580047 NZ_CAJZAV010000066.1 Protein Homology CDS 46047 46337 . + 0 ID=cds-WP_011549641.1;Parent=gene-LDO49_RS11150;Dbxref=GenBank:WP_011549641.1;Name=WP_011549641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602001.1;locus_tag=LDO49_RS11150;product=PsiF family protein;protein_id=WP_011549641.1;transl_table=11 NZ_CAJZAV010000066.1 RefSeq pseudogene 46597 46825 . + . ID=gene-LDO49_RS11155;Name=LDO49_RS11155;end_range=46825,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS11155;partial=true;pseudo=true NZ_CAJZAV010000066.1 Protein Homology CDS 46597 46825 . + 0 ID=cds-LDO49_RS11155;Parent=gene-LDO49_RS11155;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=46825,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527193.1;locus_tag=LDO49_RS11155;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000067.1 1 4496 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000067.1 RefSeq region 1 4496 . + . ID=NZ_CAJZAV010000067.1:1..4496;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_159 NZ_CAJZAV010000067.1 RefSeq gene 97 4292 . + . ID=gene-LDO49_RS11160;Name=LDO49_RS11160;end_range=4292,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11160;old_locus_tag=BCEP4_1590001;partial=true NZ_CAJZAV010000067.1 Protein Homology CDS 97 4292 . + 0 ID=cds-WP_443797939.1;Parent=gene-LDO49_RS11160;Dbxref=GenBank:WP_443797939.1;Name=WP_443797939.1;end_range=4292,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014919879.1;locus_tag=LDO49_RS11160;partial=true;product=amino acid adenylation domain-containing protein;protein_id=WP_443797939.1;transl_table=11 NZ_CAJZAV010000067.1 RefSeq pseudogene 4303 4496 . + . ID=gene-LDO49_RS37945;Name=LDO49_RS37945;end_range=4496,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37945;partial=true;pseudo=true;start_range=.,4303 NZ_CAJZAV010000067.1 Protein Homology CDS 4303 4496 . + 0 ID=cds-LDO49_RS37945;Parent=gene-LDO49_RS37945;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;end_range=4496,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014919879.1;locus_tag=LDO49_RS37945;partial=true;product=phosphopantetheine-binding protein;pseudo=true;start_range=.,4303;transl_table=11 ##sequence-region NZ_CAJZAV010000068.1 1 10966 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000068.1 RefSeq region 1 10966 . + . ID=NZ_CAJZAV010000068.1:1..10966;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_16 NZ_CAJZAV010000068.1 RefSeq pseudogene 1 704 . - . ID=gene-LDO49_RS11165;Name=LDO49_RS11165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS11165;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000068.1 Protein Homology CDS 1 704 . - 0 ID=cds-LDO49_RS11165;Parent=gene-LDO49_RS11165;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694342.1;locus_tag=LDO49_RS11165;partial=true;product=DNA translocase FtsK;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000068.1 RefSeq gene 882 1427 . - . ID=gene-LDO49_RS11170;Name=LDO49_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11170;old_locus_tag=BCEP4_160002 NZ_CAJZAV010000068.1 Protein Homology CDS 882 1427 . - 0 ID=cds-WP_021161262.1;Parent=gene-LDO49_RS11170;Dbxref=GenBank:WP_021161262.1;Name=WP_021161262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545864.1;locus_tag=LDO49_RS11170;product=META domain-containing protein;protein_id=WP_021161262.1;transl_table=11 NZ_CAJZAV010000068.1 RefSeq gene 1641 2855 . + . ID=gene-LDO49_RS11175;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=LDO49_RS11175;old_locus_tag=BCEP4_160003 NZ_CAJZAV010000068.1 Protein Homology CDS 1641 2855 . + 0 ID=cds-WP_042976186.1;Parent=gene-LDO49_RS11175;Dbxref=GenBank:WP_042976186.1;Name=WP_042976186.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698942.1;locus_tag=LDO49_RS11175;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_042976186.1;transl_table=11 NZ_CAJZAV010000068.1 RefSeq gene 2874 3059 . + . ID=gene-LDO49_RS11180;Name=LDO49_RS11180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11180;old_locus_tag=BCEP4_160004 NZ_CAJZAV010000068.1 Protein Homology CDS 2874 3059 . + 0 ID=cds-WP_021161265.1;Parent=gene-LDO49_RS11180;Dbxref=GenBank:WP_021161265.1;Name=WP_021161265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415297.1;locus_tag=LDO49_RS11180;product=DUF6726 family protein;protein_id=WP_021161265.1;transl_table=11 NZ_CAJZAV010000068.1 RefSeq gene 3141 3521 . + . ID=gene-LDO49_RS11185;Name=LDO49_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11185;old_locus_tag=BCEP4_160006 NZ_CAJZAV010000068.1 Protein Homology CDS 3141 3521 . + 0 ID=cds-WP_021161266.1;Parent=gene-LDO49_RS11185;Dbxref=GenBank:WP_021161266.1;Name=WP_021161266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328941.1;locus_tag=LDO49_RS11185;product=MliC family protein;protein_id=WP_021161266.1;transl_table=11 NZ_CAJZAV010000068.1 RefSeq gene 3960 5516 . + . ID=gene-LDO49_RS11190;Name=LDO49_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11190;old_locus_tag=BCEP4_160007 NZ_CAJZAV010000068.1 Protein Homology CDS 3960 5516 . + 0 ID=cds-WP_081052679.1;Parent=gene-LDO49_RS11190;Dbxref=GenBank:WP_081052679.1;Name=WP_081052679.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545860.1;locus_tag=LDO49_RS11190;product=DEAD/DEAH box helicase;protein_id=WP_081052679.1;transl_table=11 NZ_CAJZAV010000068.1 RefSeq gene 5711 6604 . - . ID=gene-LDO49_RS11195;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=LDO49_RS11195;old_locus_tag=BCEP4_160008 NZ_CAJZAV010000068.1 Protein Homology CDS 5711 6604 . - 0 ID=cds-WP_059486368.1;Parent=gene-LDO49_RS11195;Dbxref=GenBank:WP_059486368.1;Name=WP_059486368.1;Ontology_term=GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352777.1;locus_tag=LDO49_RS11195;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_059486368.1;transl_table=11 NZ_CAJZAV010000068.1 RefSeq gene 6627 7481 . - . ID=gene-LDO49_RS11200;Name=LDO49_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11200;old_locus_tag=BCEP4_160009 NZ_CAJZAV010000068.1 Protein Homology CDS 6627 7481 . - 0 ID=cds-WP_059649225.1;Parent=gene-LDO49_RS11200;Dbxref=GenBank:WP_059649225.1;Name=WP_059649225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758622.1;locus_tag=LDO49_RS11200;product=sulfurtransferase;protein_id=WP_059649225.1;transl_table=11 NZ_CAJZAV010000068.1 RefSeq gene 7698 10966 . + . ID=gene-LDO49_RS11205;Name=dnaE;end_range=10966,.;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=LDO49_RS11205;partial=true NZ_CAJZAV010000068.1 Protein Homology CDS 7698 10966 . + 0 ID=cds-WP_224051751.1;Parent=gene-LDO49_RS11205;Dbxref=GenBank:WP_224051751.1;Name=WP_224051751.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;end_range=10966,.;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478208.1;locus_tag=LDO49_RS11205;partial=true;product=DNA polymerase III subunit alpha;protein_id=WP_224051751.1;transl_table=11 ##sequence-region NZ_CAJZAV010000069.1 1 6850 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000069.1 RefSeq region 1 6850 . + . ID=NZ_CAJZAV010000069.1:1..6850;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_160 NZ_CAJZAV010000069.1 RefSeq pseudogene 1 149 . - . ID=gene-LDO49_RS11210;Name=LDO49_RS11210;end_range=149,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS11210;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000069.1 Protein Homology CDS 1 149 . - 0 ID=cds-LDO49_RS11210;Parent=gene-LDO49_RS11210;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=149,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493180.1;locus_tag=LDO49_RS11210;partial=true;product=MFS transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000069.1 RefSeq gene 290 1072 . - . ID=gene-LDO49_RS11215;Name=LDO49_RS11215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11215;old_locus_tag=BCEP4_1600002 NZ_CAJZAV010000069.1 Protein Homology CDS 290 1072 . - 0 ID=cds-WP_021159458.1;Parent=gene-LDO49_RS11215;Dbxref=GenBank:WP_021159458.1;Name=WP_021159458.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882072.1;locus_tag=LDO49_RS11215;product=Crp/Fnr family transcriptional regulator;protein_id=WP_021159458.1;transl_table=11 NZ_CAJZAV010000069.1 RefSeq gene 1997 2779 . + . ID=gene-LDO49_RS11220;Name=LDO49_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11220;old_locus_tag=BCEP4_1600005 NZ_CAJZAV010000069.1 Protein Homology CDS 1997 2779 . + 0 ID=cds-WP_175850445.1;Parent=gene-LDO49_RS11220;Dbxref=GenBank:WP_175850445.1;Name=WP_175850445.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899562.1;locus_tag=LDO49_RS11220;product=Crp/Fnr family transcriptional regulator;protein_id=WP_175850445.1;transl_table=11 NZ_CAJZAV010000069.1 RefSeq gene 2971 3222 . + . ID=gene-LDO49_RS11225;Name=LDO49_RS11225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11225;old_locus_tag=BCEP4_1600007 NZ_CAJZAV010000069.1 Protein Homology CDS 2971 3222 . + 0 ID=cds-WP_006490451.1;Parent=gene-LDO49_RS11225;Dbxref=GenBank:WP_006490451.1;Name=WP_006490451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522820.1;locus_tag=LDO49_RS11225;product=acyl carrier protein;protein_id=WP_006490451.1;transl_table=11 NZ_CAJZAV010000069.1 RefSeq gene 3219 4415 . + . ID=gene-LDO49_RS11230;Name=LDO49_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11230;old_locus_tag=BCEP4_1600006 NZ_CAJZAV010000069.1 Protein Homology CDS 3219 4415 . + 0 ID=cds-WP_021159460.1;Parent=gene-LDO49_RS11230;Dbxref=GenBank:WP_021159460.1;Name=WP_021159460.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490448.1;locus_tag=LDO49_RS11230;product=acyl-CoA dehydrogenase family protein;protein_id=WP_021159460.1;transl_table=11 NZ_CAJZAV010000069.1 RefSeq gene 4412 5386 . + . ID=gene-LDO49_RS11235;Name=LDO49_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11235;old_locus_tag=BCEP4_1600008 NZ_CAJZAV010000069.1 Protein Homology CDS 4412 5386 . + 0 ID=cds-WP_048021856.1;Parent=gene-LDO49_RS11235;Dbxref=GenBank:WP_048021856.1;Name=WP_048021856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547858.1;locus_tag=LDO49_RS11235;product=amino acid--[acyl-carrier-protein] ligase;protein_id=WP_048021856.1;transl_table=11 NZ_CAJZAV010000069.1 RefSeq gene 5383 6441 . + . ID=gene-LDO49_RS11240;Name=LDO49_RS11240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11240;old_locus_tag=BCEP4_1600010 NZ_CAJZAV010000069.1 Protein Homology CDS 5383 6441 . + 0 ID=cds-WP_048021943.1;Parent=gene-LDO49_RS11240;Dbxref=GenBank:WP_048021943.1;Name=WP_048021943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365914.1;locus_tag=LDO49_RS11240;product=DUF1839 family protein;protein_id=WP_048021943.1;transl_table=11 NZ_CAJZAV010000069.1 RefSeq gene 6438 6850 . + . ID=gene-LDO49_RS11245;Name=LDO49_RS11245;end_range=6850,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11245;partial=true NZ_CAJZAV010000069.1 Protein Homology CDS 6438 6850 . + 0 ID=cds-WP_443797940.1;Parent=gene-LDO49_RS11245;Dbxref=GenBank:WP_443797940.1;Name=WP_443797940.1;end_range=6850,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493294.1;locus_tag=LDO49_RS11245;partial=true;product=glycosyl hydrolase 2 galactose-binding domain-containing protein;protein_id=WP_443797940.1;transl_table=11 ##sequence-region NZ_CAJZAV010000070.1 1 39413 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000070.1 RefSeq region 1 39413 . + . ID=NZ_CAJZAV010000070.1:1..39413;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_161 NZ_CAJZAV010000070.1 RefSeq pseudogene 1 154 . + . ID=gene-LDO49_RS37950;Name=LDO49_RS37950;end_range=154,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37950;old_locus_tag=BCEP4_1610001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000070.1 Protein Homology CDS 1 154 . + 0 ID=cds-LDO49_RS37950;Parent=gene-LDO49_RS37950;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=154,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495449.1;locus_tag=LDO49_RS37950;partial=true;product=EAL domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 450 836 . + . ID=gene-LDO49_RS11255;Name=LDO49_RS11255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11255;old_locus_tag=BCEP4_1610003 NZ_CAJZAV010000070.1 Protein Homology CDS 450 836 . + 0 ID=cds-WP_042973415.1;Parent=gene-LDO49_RS11255;Dbxref=GenBank:WP_042973415.1;Name=WP_042973415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477643.1;locus_tag=LDO49_RS11255;product=hypothetical protein;protein_id=WP_042973415.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 833 1237 . + . ID=gene-LDO49_RS11260;Name=LDO49_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11260;old_locus_tag=BCEP4_1610004 NZ_CAJZAV010000070.1 Protein Homology CDS 833 1237 . + 0 ID=cds-WP_059695293.1;Parent=gene-LDO49_RS11260;Dbxref=GenBank:WP_059695293.1;Name=WP_059695293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477644.1;locus_tag=LDO49_RS11260;product=hypothetical protein;protein_id=WP_059695293.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 1358 2083 . + . ID=gene-LDO49_RS11265;Name=LDO49_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11265;old_locus_tag=BCEP4_1610005 NZ_CAJZAV010000070.1 Protein Homology CDS 1358 2083 . + 0 ID=cds-WP_021157415.1;Parent=gene-LDO49_RS11265;Dbxref=GenBank:WP_021157415.1;Name=WP_021157415.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546341.1;locus_tag=LDO49_RS11265;product=copper homeostasis protein CutC;protein_id=WP_021157415.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 2165 3520 . - . ID=gene-LDO49_RS11270;Name=LDO49_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11270;old_locus_tag=BCEP4_1610006 NZ_CAJZAV010000070.1 Protein Homology CDS 2165 3520 . - 0 ID=cds-WP_059490459.1;Parent=gene-LDO49_RS11270;Dbxref=GenBank:WP_059490459.1;Name=WP_059490459.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495446.1;locus_tag=LDO49_RS11270;product=purine-cytosine permease family protein;protein_id=WP_059490459.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 3737 4732 . - . ID=gene-LDO49_RS11275;Name=LDO49_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11275;old_locus_tag=BCEP4_1610007 NZ_CAJZAV010000070.1 Protein Homology CDS 3737 4732 . - 0 ID=cds-WP_060070175.1;Parent=gene-LDO49_RS11275;Dbxref=GenBank:WP_060070175.1;Name=WP_060070175.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483468.1;locus_tag=LDO49_RS11275;product=biotin-dependent carboxyltransferase family protein;protein_id=WP_060070175.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 4722 5597 . - . ID=gene-LDO49_RS11280;Name=LDO49_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11280;old_locus_tag=BCEP4_1610008 NZ_CAJZAV010000070.1 Protein Homology CDS 4722 5597 . - 0 ID=cds-WP_059586330.1;Parent=gene-LDO49_RS11280;Dbxref=GenBank:WP_059586330.1;Name=WP_059586330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010111384.1;locus_tag=LDO49_RS11280;product=5-oxoprolinase subunit B family protein;protein_id=WP_059586330.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 5594 7057 . - . ID=gene-LDO49_RS11285;Name=LDO49_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11285;old_locus_tag=BCEP4_1610009 NZ_CAJZAV010000070.1 Protein Homology CDS 5594 7057 . - 0 ID=cds-WP_060070173.1;Parent=gene-LDO49_RS11285;Dbxref=GenBank:WP_060070173.1;Name=WP_060070173.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353382.1;locus_tag=LDO49_RS11285;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_060070173.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 7062 7304 . - . ID=gene-LDO49_RS11290;Name=LDO49_RS11290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11290;old_locus_tag=BCEP4_1610010 NZ_CAJZAV010000070.1 Protein Homology CDS 7062 7304 . - 0 ID=cds-WP_059856972.1;Parent=gene-LDO49_RS11290;Dbxref=GenBank:WP_059856972.1;Name=WP_059856972.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877372.1;locus_tag=LDO49_RS11290;product=acetyl-CoA carboxylase;protein_id=WP_059856972.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 7321 8103 . - . ID=gene-LDO49_RS11295;Name=LDO49_RS11295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11295;old_locus_tag=BCEP4_1610011 NZ_CAJZAV010000070.1 Protein Homology CDS 7321 8103 . - 0 ID=cds-WP_021157409.1;Parent=gene-LDO49_RS11295;Dbxref=GenBank:WP_021157409.1;Name=WP_021157409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877371.1;locus_tag=LDO49_RS11295;product=5-oxoprolinase subunit PxpA;protein_id=WP_021157409.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 8363 9280 . + . ID=gene-LDO49_RS11300;Name=LDO49_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11300;old_locus_tag=BCEP4_1610012 NZ_CAJZAV010000070.1 Protein Homology CDS 8363 9280 . + 0 ID=cds-WP_048026260.1;Parent=gene-LDO49_RS11300;Dbxref=GenBank:WP_048026260.1;Name=WP_048026260.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407108.1;locus_tag=LDO49_RS11300;product=LysR family transcriptional regulator;protein_id=WP_048026260.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 9359 10381 . - . ID=gene-LDO49_RS11305;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=LDO49_RS11305;old_locus_tag=BCEP4_1610014 NZ_CAJZAV010000070.1 Protein Homology CDS 9359 10381 . - 0 ID=cds-WP_021157406.1;Parent=gene-LDO49_RS11305;Dbxref=GenBank:WP_021157406.1;Name=WP_021157406.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886182.1;locus_tag=LDO49_RS11305;product=biotin synthase BioB;protein_id=WP_021157406.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 10437 11156 . - . ID=gene-LDO49_RS11310;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=LDO49_RS11310;old_locus_tag=BCEP4_1610015 NZ_CAJZAV010000070.1 Protein Homology CDS 10437 11156 . - 0 ID=cds-WP_027788995.1;Parent=gene-LDO49_RS11310;Dbxref=GenBank:WP_027788995.1;Name=WP_027788995.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750875.1;locus_tag=LDO49_RS11310;product=dethiobiotin synthase;protein_id=WP_027788995.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 11153 12457 . - . ID=gene-LDO49_RS11315;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=LDO49_RS11315;old_locus_tag=BCEP4_1610016 NZ_CAJZAV010000070.1 Protein Homology CDS 11153 12457 . - 0 ID=cds-WP_060070171.1;Parent=gene-LDO49_RS11315;Dbxref=GenBank:WP_060070171.1;Name=WP_060070171.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364830.1;locus_tag=LDO49_RS11315;product=8-amino-7-oxononanoate synthase;protein_id=WP_060070171.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 12454 13800 . - . ID=gene-LDO49_RS11320;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=LDO49_RS11320;old_locus_tag=BCEP4_1610017 NZ_CAJZAV010000070.1 Protein Homology CDS 12454 13800 . - 0 ID=cds-WP_060070169.1;Parent=gene-LDO49_RS11320;Dbxref=GenBank:WP_060070169.1;Name=WP_060070169.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090506.1;locus_tag=LDO49_RS11320;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_060070169.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 14314 15591 . - . ID=gene-LDO49_RS11325;Name=LDO49_RS11325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11325;old_locus_tag=BCEP4_1610018 NZ_CAJZAV010000070.1 Protein Homology CDS 14314 15591 . - 0 ID=cds-WP_060070167.1;Parent=gene-LDO49_RS11325;Dbxref=GenBank:WP_060070167.1;Name=WP_060070167.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477650.1;locus_tag=LDO49_RS11325;product=dienelactone hydrolase family protein;protein_id=WP_060070167.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 15699 16136 . - . ID=gene-LDO49_RS11330;Name=LDO49_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11330;old_locus_tag=BCEP4_1610019 NZ_CAJZAV010000070.1 Protein Homology CDS 15699 16136 . - 0 ID=cds-WP_059677244.1;Parent=gene-LDO49_RS11330;Dbxref=GenBank:WP_059677244.1;Name=WP_059677244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495438.1;locus_tag=LDO49_RS11330;product=YchJ family protein;protein_id=WP_059677244.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 16185 16862 . - . ID=gene-LDO49_RS11335;Name=LDO49_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11335;old_locus_tag=BCEP4_1610020 NZ_CAJZAV010000070.1 Protein Homology CDS 16185 16862 . - 0 ID=cds-WP_021157400.1;Parent=gene-LDO49_RS11335;Dbxref=GenBank:WP_021157400.1;Name=WP_021157400.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895885.1;locus_tag=LDO49_RS11335;product=SDR family oxidoreductase;protein_id=WP_021157400.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 16965 17735 . - . ID=gene-LDO49_RS11340;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=LDO49_RS11340;old_locus_tag=BCEP4_1610021 NZ_CAJZAV010000070.1 Protein Homology CDS 16965 17735 . - 0 ID=cds-WP_021157399.1;Parent=gene-LDO49_RS11340;Dbxref=GenBank:WP_021157399.1;Name=WP_021157399.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493618.1;locus_tag=LDO49_RS11340;product=carbonate dehydratase;protein_id=WP_021157399.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 17797 19614 . - . ID=gene-LDO49_RS11345;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=LDO49_RS11345;old_locus_tag=BCEP4_1610022 NZ_CAJZAV010000070.1 Protein Homology CDS 17797 19614 . - 0 ID=cds-WP_021157398.1;Parent=gene-LDO49_RS11345;Dbxref=GenBank:WP_021157398.1;Name=WP_021157398.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407100.1;locus_tag=LDO49_RS11345;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_021157398.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 19921 21000 . + . ID=gene-LDO49_RS11350;Name=LDO49_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11350;old_locus_tag=BCEP4_1610023 NZ_CAJZAV010000070.1 Protein Homology CDS 19921 21000 . + 0 ID=cds-WP_224051752.1;Parent=gene-LDO49_RS11350;Dbxref=GenBank:WP_224051752.1;Name=WP_224051752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477655.1;locus_tag=LDO49_RS11350;product=MBL fold metallo-hydrolase;protein_id=WP_224051752.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 21017 22663 . - . ID=gene-LDO49_RS11355;Name=LDO49_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11355;old_locus_tag=BCEP4_1610024 NZ_CAJZAV010000070.1 Protein Homology CDS 21017 22663 . - 0 ID=cds-WP_224051753.1;Parent=gene-LDO49_RS11355;Dbxref=GenBank:WP_224051753.1;Name=WP_224051753.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895889.1;locus_tag=LDO49_RS11355;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_224051753.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 22863 24458 . - . ID=gene-LDO49_RS11360;Name=LDO49_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11360;old_locus_tag=BCEP4_1610025 NZ_CAJZAV010000070.1 Protein Homology CDS 22863 24458 . - 0 ID=cds-WP_059554307.1;Parent=gene-LDO49_RS11360;Dbxref=GenBank:WP_059554307.1;Name=WP_059554307.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895890.1;locus_tag=LDO49_RS11360;product=ABC transporter substrate-binding protein;protein_id=WP_059554307.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 24857 25630 . - . ID=gene-LDO49_RS11365;Name=LDO49_RS11365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11365;old_locus_tag=BCEP4_1610026 NZ_CAJZAV010000070.1 Protein Homology CDS 24857 25630 . - 0 ID=cds-WP_224051754.1;Parent=gene-LDO49_RS11365;Dbxref=GenBank:WP_224051754.1;Name=WP_224051754.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886170.1;locus_tag=LDO49_RS11365;product=SDR family oxidoreductase;protein_id=WP_224051754.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 25650 26288 . - . ID=gene-LDO49_RS11370;Name=LDO49_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11370;old_locus_tag=BCEP4_1610027 NZ_CAJZAV010000070.1 Protein Homology CDS 25650 26288 . - 0 ID=cds-WP_021162606.1;Parent=gene-LDO49_RS11370;Dbxref=GenBank:WP_021162606.1;Name=WP_021162606.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190112.1;locus_tag=LDO49_RS11370;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_021162606.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 26358 27275 . - . ID=gene-LDO49_RS11375;Name=LDO49_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11375;old_locus_tag=BCEP4_1610028 NZ_CAJZAV010000070.1 Protein Homology CDS 26358 27275 . - 0 ID=cds-WP_059490482.1;Parent=gene-LDO49_RS11375;Dbxref=GenBank:WP_059490482.1;Name=WP_059490482.1;Ontology_term=GO:0042834,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750888.1;locus_tag=LDO49_RS11375;product=SPOR domain-containing protein;protein_id=WP_059490482.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 27393 29174 . - . ID=gene-LDO49_RS11380;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=LDO49_RS11380;old_locus_tag=BCEP4_1610029 NZ_CAJZAV010000070.1 Protein Homology CDS 27393 29174 . - 0 ID=cds-WP_021162608.1;Parent=gene-LDO49_RS11380;Dbxref=GenBank:WP_021162608.1;Name=WP_021162608.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522947.1;locus_tag=LDO49_RS11380;product=arginine--tRNA ligase;protein_id=WP_021162608.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 29375 29698 . + . ID=gene-LDO49_RS11385;Name=LDO49_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11385;old_locus_tag=BCEP4_1610031 NZ_CAJZAV010000070.1 Protein Homology CDS 29375 29698 . + 0 ID=cds-WP_006489103.1;Parent=gene-LDO49_RS11385;Dbxref=GenBank:WP_006489103.1;Name=WP_006489103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334383.1;locus_tag=LDO49_RS11385;product=DUF1840 domain-containing protein;protein_id=WP_006489103.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 29814 32531 . - . ID=gene-LDO49_RS11390;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=LDO49_RS11390;old_locus_tag=BCEP4_1610032 NZ_CAJZAV010000070.1 Protein Homology CDS 29814 32531 . - 0 ID=cds-WP_224051755.1;Parent=gene-LDO49_RS11390;Dbxref=GenBank:WP_224051755.1;Name=WP_224051755.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009918375.1;locus_tag=LDO49_RS11390;product=methionine synthase;protein_id=WP_224051755.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 32574 33641 . - . ID=gene-LDO49_RS11395;Name=LDO49_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11395;old_locus_tag=BCEP4_1610033 NZ_CAJZAV010000070.1 Protein Homology CDS 32574 33641 . - 0 ID=cds-WP_042977166.1;Parent=gene-LDO49_RS11395;Dbxref=GenBank:WP_042977166.1;Name=WP_042977166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546326.1;locus_tag=LDO49_RS11395;product=homocysteine S-methyltransferase family protein;protein_id=WP_042977166.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 33844 34101 . - . ID=gene-LDO49_RS11400;Name=LDO49_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11400;old_locus_tag=BCEP4_1610035 NZ_CAJZAV010000070.1 Protein Homology CDS 33844 34101 . - 0 ID=cds-WP_006477667.1;Parent=gene-LDO49_RS11400;Dbxref=GenBank:WP_006477667.1;Name=WP_006477667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398119.1;locus_tag=LDO49_RS11400;product=BTH_I0359 family protein;protein_id=WP_006477667.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 34356 35648 . - . ID=gene-LDO49_RS11405;Name=LDO49_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11405;old_locus_tag=BCEP4_1610036 NZ_CAJZAV010000070.1 Protein Homology CDS 34356 35648 . - 0 ID=cds-WP_060070156.1;Parent=gene-LDO49_RS11405;Dbxref=GenBank:WP_060070156.1;Name=WP_060070156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353358.1;locus_tag=LDO49_RS11405;product=DUF3108 domain-containing protein;protein_id=WP_060070156.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 35761 36636 . - . ID=gene-LDO49_RS11410;Name=LDO49_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11410;old_locus_tag=BCEP4_1610038 NZ_CAJZAV010000070.1 Protein Homology CDS 35761 36636 . - 0 ID=cds-WP_021160146.1;Parent=gene-LDO49_RS11410;Dbxref=GenBank:WP_021160146.1;Name=WP_021160146.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212625.1;locus_tag=LDO49_RS11410;product=IclR family transcriptional regulator;protein_id=WP_021160146.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 36793 37785 . + . ID=gene-LDO49_RS11415;Name=LDO49_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11415;old_locus_tag=BCEP4_1610037 NZ_CAJZAV010000070.1 Protein Homology CDS 36793 37785 . + 0 ID=cds-WP_021160147.1;Parent=gene-LDO49_RS11415;Dbxref=GenBank:WP_021160147.1;Name=WP_021160147.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189282.1;locus_tag=LDO49_RS11415;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_021160147.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 37903 38730 . + . ID=gene-LDO49_RS11420;Name=LDO49_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11420;old_locus_tag=BCEP4_1610039 NZ_CAJZAV010000070.1 Protein Homology CDS 37903 38730 . + 0 ID=cds-WP_224051756.1;Parent=gene-LDO49_RS11420;Dbxref=GenBank:WP_224051756.1;Name=WP_224051756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895900.1;locus_tag=LDO49_RS11420;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_224051756.1;transl_table=11 NZ_CAJZAV010000070.1 RefSeq gene 38819 39413 . + . ID=gene-LDO49_RS11425;Name=LDO49_RS11425;end_range=39413,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11425;partial=true NZ_CAJZAV010000070.1 Protein Homology CDS 38819 39413 . + 0 ID=cds-WP_224051757.1;Parent=gene-LDO49_RS11425;Dbxref=GenBank:WP_224051757.1;Name=WP_224051757.1;end_range=39413,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329310.1;locus_tag=LDO49_RS11425;partial=true;product=PhaM family polyhydroxyalkanoate granule multifunctional regulatory protein;protein_id=WP_224051757.1;transl_table=11 ##sequence-region NZ_CAJZAV010000071.1 1 9321 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000071.1 RefSeq region 1 9321 . + . ID=NZ_CAJZAV010000071.1:1..9321;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_162 NZ_CAJZAV010000071.1 RefSeq gene 1 2216 . - . ID=gene-LDO49_RS11430;Name=LDO49_RS11430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11430;partial=true;start_range=.,1 NZ_CAJZAV010000071.1 Protein Homology CDS 1 2216 . - 0 ID=cds-WP_224051758.1;Parent=gene-LDO49_RS11430;Dbxref=GenBank:WP_224051758.1;Name=WP_224051758.1;Ontology_term=GO:0006812,GO:0042625,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled ion transmembrane transporter activity|0042625||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492246.1;locus_tag=LDO49_RS11430;partial=true;product=heavy metal translocating P-type ATPase;protein_id=WP_224051758.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000071.1 RefSeq gene 2309 2740 . + . ID=gene-LDO49_RS11435;Name=cadR;gbkey=Gene;gene=cadR;gene_biotype=protein_coding;locus_tag=LDO49_RS11435;old_locus_tag=BCEP4_1620003 NZ_CAJZAV010000071.1 Protein Homology CDS 2309 2740 . + 0 ID=cds-WP_014895515.1;Parent=gene-LDO49_RS11435;Dbxref=GenBank:WP_014895515.1;Name=WP_014895515.1;Ontology_term=GO:0045893,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;gene=cadR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195850.1;locus_tag=LDO49_RS11435;product=Cd(II)/Pb(II)-responsive transcriptional regulator;protein_id=WP_014895515.1;transl_table=11 NZ_CAJZAV010000071.1 RefSeq gene 2809 3381 . + . ID=gene-LDO49_RS11440;Name=LDO49_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11440;old_locus_tag=BCEP4_1620004 NZ_CAJZAV010000071.1 Protein Homology CDS 2809 3381 . + 0 ID=cds-WP_021164267.1;Parent=gene-LDO49_RS11440;Dbxref=GenBank:WP_021164267.1;Name=WP_021164267.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490876.1;locus_tag=LDO49_RS11440;product=PadR family transcriptional regulator;protein_id=WP_021164267.1;transl_table=11 NZ_CAJZAV010000071.1 RefSeq gene 3427 4857 . - . ID=gene-LDO49_RS11445;Name=LDO49_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11445;old_locus_tag=BCEP4_1620005 NZ_CAJZAV010000071.1 Protein Homology CDS 3427 4857 . - 0 ID=cds-WP_060073583.1;Parent=gene-LDO49_RS11445;Dbxref=GenBank:WP_060073583.1;Name=WP_060073583.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546787.1;locus_tag=LDO49_RS11445;product=FAD-binding oxidoreductase;protein_id=WP_060073583.1;transl_table=11 NZ_CAJZAV010000071.1 RefSeq gene 4873 5661 . - . ID=gene-LDO49_RS11450;Name=LDO49_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11450;old_locus_tag=BCEP4_1620006 NZ_CAJZAV010000071.1 Protein Homology CDS 4873 5661 . - 0 ID=cds-WP_048026164.1;Parent=gene-LDO49_RS11450;Dbxref=GenBank:WP_048026164.1;Name=WP_048026164.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477297.1;locus_tag=LDO49_RS11450;product=ABC transporter substrate-binding protein;protein_id=WP_048026164.1;transl_table=11 NZ_CAJZAV010000071.1 RefSeq gene 5735 6889 . - . ID=gene-LDO49_RS11455;Name=LDO49_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11455;old_locus_tag=BCEP4_1620007 NZ_CAJZAV010000071.1 Protein Homology CDS 5735 6889 . - 0 ID=cds-WP_021164078.1;Parent=gene-LDO49_RS11455;Dbxref=GenBank:WP_021164078.1;Name=WP_021164078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327613.1;locus_tag=LDO49_RS11455;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_021164078.1;transl_table=11 NZ_CAJZAV010000071.1 RefSeq gene 7100 7768 . - . ID=gene-LDO49_RS11460;Name=LDO49_RS11460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11460;old_locus_tag=BCEP4_1620009 NZ_CAJZAV010000071.1 Protein Homology CDS 7100 7768 . - 0 ID=cds-WP_060073581.1;Parent=gene-LDO49_RS11460;Dbxref=GenBank:WP_060073581.1;Name=WP_060073581.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350536.1;locus_tag=LDO49_RS11460;product=TetR/AcrR family transcriptional regulator;protein_id=WP_060073581.1;transl_table=11 NZ_CAJZAV010000071.1 RefSeq gene 7890 9321 . + . ID=gene-LDO49_RS11465;Name=LDO49_RS11465;end_range=9321,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11465;partial=true NZ_CAJZAV010000071.1 Protein Homology CDS 7890 9321 . + 0 ID=cds-WP_224051759.1;Parent=gene-LDO49_RS11465;Dbxref=GenBank:WP_224051759.1;Name=WP_224051759.1;Ontology_term=GO:0016627;end_range=9321,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254845.1;locus_tag=LDO49_RS11465;partial=true;product=acyl-CoA dehydrogenase family protein;protein_id=WP_224051759.1;transl_table=11 ##sequence-region NZ_CAJZAV010000072.1 1 14527 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000072.1 RefSeq region 1 14527 . + . ID=NZ_CAJZAV010000072.1:1..14527;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_163 NZ_CAJZAV010000072.1 RefSeq gene 92 1399 . + . ID=gene-LDO49_RS11470;Name=LDO49_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11470;old_locus_tag=BCEP4_1630002 NZ_CAJZAV010000072.1 Protein Homology CDS 92 1399 . + 0 ID=cds-WP_224051761.1;Parent=gene-LDO49_RS11470;Dbxref=GenBank:WP_224051761.1;Name=WP_224051761.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480912.1;locus_tag=LDO49_RS11470;product=MFS transporter;protein_id=WP_224051761.1;transl_table=11 NZ_CAJZAV010000072.1 RefSeq gene 1449 2150 . + . ID=gene-LDO49_RS11475;Name=LDO49_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11475;old_locus_tag=BCEP4_1630003 NZ_CAJZAV010000072.1 Protein Homology CDS 1449 2150 . + 0 ID=cds-WP_224051762.1;Parent=gene-LDO49_RS11475;Dbxref=GenBank:WP_224051762.1;Name=WP_224051762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480911.1;locus_tag=LDO49_RS11475;product=DUF2848 domain-containing protein;protein_id=WP_224051762.1;transl_table=11 NZ_CAJZAV010000072.1 RefSeq gene 2580 3971 . - . ID=gene-LDO49_RS11480;Name=LDO49_RS11480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11480;old_locus_tag=BCEP4_1630005 NZ_CAJZAV010000072.1 Protein Homology CDS 2580 3971 . - 0 ID=cds-WP_042973906.1;Parent=gene-LDO49_RS11480;Dbxref=GenBank:WP_042973906.1;Name=WP_042973906.1;Ontology_term=GO:0006396,GO:0008452;gbkey=CDS;go_function=RNA ligase activity|0008452||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016450903.1;locus_tag=LDO49_RS11480;product=RtcB family protein;protein_id=WP_042973906.1;transl_table=11 NZ_CAJZAV010000072.1 RefSeq gene 4104 5087 . - . ID=gene-LDO49_RS11485;Name=LDO49_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11485;old_locus_tag=BCEP4_1630006 NZ_CAJZAV010000072.1 Protein Homology CDS 4104 5087 . - 0 ID=cds-WP_059812867.1;Parent=gene-LDO49_RS11485;Dbxref=GenBank:WP_059812867.1;Name=WP_059812867.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758089.1;locus_tag=LDO49_RS11485;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_059812867.1;transl_table=11 NZ_CAJZAV010000072.1 RefSeq gene 5186 6088 . + . ID=gene-LDO49_RS11490;Name=LDO49_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11490;old_locus_tag=BCEP4_1630007 NZ_CAJZAV010000072.1 Protein Homology CDS 5186 6088 . + 0 ID=cds-WP_224051764.1;Parent=gene-LDO49_RS11490;Dbxref=GenBank:WP_224051764.1;Name=WP_224051764.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492639.1;locus_tag=LDO49_RS11490;product=LysR family transcriptional regulator;protein_id=WP_224051764.1;transl_table=11 NZ_CAJZAV010000072.1 RefSeq gene 6240 6560 . - . ID=gene-LDO49_RS11495;Name=LDO49_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11495;old_locus_tag=BCEP4_1630008 NZ_CAJZAV010000072.1 Protein Homology CDS 6240 6560 . - 0 ID=cds-WP_021158185.1;Parent=gene-LDO49_RS11495;Dbxref=GenBank:WP_021158185.1;Name=WP_021158185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339716.1;locus_tag=LDO49_RS11495;product=DUF7660 family protein;protein_id=WP_021158185.1;transl_table=11 NZ_CAJZAV010000072.1 RefSeq gene 6634 7506 . - . ID=gene-LDO49_RS11500;Name=LDO49_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11500;old_locus_tag=BCEP4_1630009 NZ_CAJZAV010000072.1 Protein Homology CDS 6634 7506 . - 0 ID=cds-WP_059485416.1;Parent=gene-LDO49_RS11500;Dbxref=GenBank:WP_059485416.1;Name=WP_059485416.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898832.1;locus_tag=LDO49_RS11500;product=LysR family transcriptional regulator;protein_id=WP_059485416.1;transl_table=11 NZ_CAJZAV010000072.1 RefSeq gene 7677 9137 . + . ID=gene-LDO49_RS11505;Name=LDO49_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11505;old_locus_tag=BCEP4_1630010 NZ_CAJZAV010000072.1 Protein Homology CDS 7677 9137 . + 0 ID=cds-WP_224051766.1;Parent=gene-LDO49_RS11505;Dbxref=GenBank:WP_224051766.1;Name=WP_224051766.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496843.1;locus_tag=LDO49_RS11505;product=MFS transporter;protein_id=WP_224051766.1;transl_table=11 NZ_CAJZAV010000072.1 RefSeq gene 9216 9407 . - . ID=gene-LDO49_RS11510;Name=LDO49_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11510;old_locus_tag=BCEP4_1630011 NZ_CAJZAV010000072.1 Protein Homology CDS 9216 9407 . - 0 ID=cds-WP_021158182.1;Parent=gene-LDO49_RS11510;Dbxref=GenBank:WP_021158182.1;Name=WP_021158182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012403989.1;locus_tag=LDO49_RS11510;product=oxidoreductase-like domain-containing protein;protein_id=WP_021158182.1;transl_table=11 NZ_CAJZAV010000072.1 RefSeq gene 9490 9927 . - . ID=gene-LDO49_RS11515;Name=LDO49_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11515;old_locus_tag=BCEP4_1630012 NZ_CAJZAV010000072.1 Protein Homology CDS 9490 9927 . - 0 ID=cds-WP_021158181.1;Parent=gene-LDO49_RS11515;Dbxref=GenBank:WP_021158181.1;Name=WP_021158181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015001932.1;locus_tag=LDO49_RS11515;product=hypothetical protein;protein_id=WP_021158181.1;transl_table=11 NZ_CAJZAV010000072.1 RefSeq gene 10088 10510 . + . ID=gene-LDO49_RS11520;Name=LDO49_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11520;old_locus_tag=BCEP4_1630013 NZ_CAJZAV010000072.1 Protein Homology CDS 10088 10510 . + 0 ID=cds-WP_060341146.1;Parent=gene-LDO49_RS11520;Dbxref=GenBank:WP_060341146.1;Name=WP_060341146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485669.1;locus_tag=LDO49_RS11520;product=RidA family protein;protein_id=WP_060341146.1;transl_table=11 NZ_CAJZAV010000072.1 RefSeq gene 10583 11986 . - . ID=gene-LDO49_RS11525;Name=creD;gbkey=Gene;gene=creD;gene_biotype=protein_coding;locus_tag=LDO49_RS11525;old_locus_tag=BCEP4_1630014 NZ_CAJZAV010000072.1 Protein Homology CDS 10583 11986 . - 0 ID=cds-WP_224051767.1;Parent=gene-LDO49_RS11525;Dbxref=GenBank:WP_224051767.1;Name=WP_224051767.1;gbkey=CDS;gene=creD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480903.1;locus_tag=LDO49_RS11525;product=cell envelope integrity protein CreD;protein_id=WP_224051767.1;transl_table=11 NZ_CAJZAV010000072.1 RefSeq gene 12090 13541 . - . ID=gene-LDO49_RS11530;Name=creC;gbkey=Gene;gene=creC;gene_biotype=protein_coding;locus_tag=LDO49_RS11530;old_locus_tag=BCEP4_1630015 NZ_CAJZAV010000072.1 Protein Homology CDS 12090 13541 . - 0 ID=cds-WP_224051768.1;Parent=gene-LDO49_RS11530;Dbxref=GenBank:WP_224051768.1;Name=WP_224051768.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=creC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008650766.1;locus_tag=LDO49_RS11530;product=two-component system sensor histidine kinase CreC;protein_id=WP_224051768.1;transl_table=11 NZ_CAJZAV010000072.1 RefSeq gene 13557 14267 . - . ID=gene-LDO49_RS11535;Name=creB;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=LDO49_RS11535;old_locus_tag=BCEP4_1630016 NZ_CAJZAV010000072.1 Protein Homology CDS 13557 14267 . - 0 ID=cds-WP_224051769.1;Parent=gene-LDO49_RS11535;Dbxref=GenBank:WP_224051769.1;Name=WP_224051769.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=creB;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547345.1;locus_tag=LDO49_RS11535;product=two-component system response regulator CreB;protein_id=WP_224051769.1;transl_table=11 NZ_CAJZAV010000072.1 RefSeq gene 14341 14527 . - . ID=gene-LDO49_RS37955;Name=LDO49_RS37955;end_range=14527,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37955;old_locus_tag=BCEP4_1630017;partial=true;start_range=.,14341 NZ_CAJZAV010000072.1 Protein Homology CDS 14341 14527 . - 1 ID=cds-WP_224051770.1;Parent=gene-LDO49_RS37955;Dbxref=GenBank:WP_224051770.1;Name=WP_224051770.1;end_range=14527,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659170.1;locus_tag=LDO49_RS37955;partial=true;product=SDR family oxidoreductase;protein_id=WP_224051770.1;start_range=.,14341;transl_table=11 ##sequence-region NZ_CAJZAV010000073.1 1 55090 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000073.1 RefSeq region 1 55090 . + . ID=NZ_CAJZAV010000073.1:1..55090;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_164 NZ_CAJZAV010000073.1 RefSeq gene 1 227 . - . ID=gene-LDO49_RS37960;Name=LDO49_RS37960;end_range=227,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37960;partial=true;start_range=.,1 NZ_CAJZAV010000073.1 Protein Homology CDS 1 227 . - 1 ID=cds-WP_443797941.1;Parent=gene-LDO49_RS37960;Dbxref=GenBank:WP_443797941.1;Name=WP_443797941.1;end_range=227,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339442.1;locus_tag=LDO49_RS37960;partial=true;product=hypothetical protein;protein_id=WP_443797941.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 238 1965 . - . ID=gene-LDO49_RS11545;Name=LDO49_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11545;old_locus_tag=BCEP4_1640002;partial=true;start_range=.,238 NZ_CAJZAV010000073.1 Protein Homology CDS 238 1965 . - 0 ID=cds-WP_443797942.1;Parent=gene-LDO49_RS11545;Dbxref=GenBank:WP_443797942.1;Name=WP_443797942.1;Ontology_term=GO:0007155,GO:0015031;gbkey=CDS;go_process=cell adhesion|0007155||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339442.1;locus_tag=LDO49_RS11545;partial=true;product=YadA family autotransporter adhesin;protein_id=WP_443797942.1;start_range=.,238;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 3213 4115 . - . ID=gene-LDO49_RS11550;Name=LDO49_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11550;old_locus_tag=BCEP4_1640007 NZ_CAJZAV010000073.1 Protein Homology CDS 3213 4115 . - 0 ID=cds-WP_042973130.1;Parent=gene-LDO49_RS11550;Dbxref=GenBank:WP_042973130.1;Name=WP_042973130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009934541.1;locus_tag=LDO49_RS11550;product=hypothetical protein;protein_id=WP_042973130.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 4211 4429 . - . ID=gene-LDO49_RS11555;Name=LDO49_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11555;old_locus_tag=BCEP4_1640008 NZ_CAJZAV010000073.1 Protein Homology CDS 4211 4429 . - 0 ID=cds-WP_021157097.1;Parent=gene-LDO49_RS11555;Dbxref=GenBank:WP_021157097.1;Name=WP_021157097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898447.1;locus_tag=LDO49_RS11555;product=hypothetical protein;protein_id=WP_021157097.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 4666 5316 . - . ID=gene-LDO49_RS11560;Name=LDO49_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11560;old_locus_tag=BCEP4_1640009 NZ_CAJZAV010000073.1 Protein Homology CDS 4666 5316 . - 0 ID=cds-WP_042973131.1;Parent=gene-LDO49_RS11560;Dbxref=GenBank:WP_042973131.1;Name=WP_042973131.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396284.1;locus_tag=LDO49_RS11560;product=NADPH-dependent FMN reductase;protein_id=WP_042973131.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 5628 5933 . - . ID=gene-LDO49_RS11565;Name=LDO49_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11565;old_locus_tag=BCEP4_1640010 NZ_CAJZAV010000073.1 Protein Homology CDS 5628 5933 . - 0 ID=cds-WP_021157098.1;Parent=gene-LDO49_RS11565;Dbxref=GenBank:WP_021157098.1;Name=WP_021157098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331318.1;locus_tag=LDO49_RS11565;product=NIPSNAP family protein;protein_id=WP_021157098.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 6215 7000 . + . ID=gene-LDO49_RS11570;Name=LDO49_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11570;old_locus_tag=BCEP4_1640011 NZ_CAJZAV010000073.1 Protein Homology CDS 6215 7000 . + 0 ID=cds-WP_059585812.1;Parent=gene-LDO49_RS11570;Dbxref=GenBank:WP_059585812.1;Name=WP_059585812.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354059.1;locus_tag=LDO49_RS11570;product=GNAT family N-acetyltransferase;protein_id=WP_059585812.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 7279 8622 . - . ID=gene-LDO49_RS11575;Name=LDO49_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11575;old_locus_tag=BCEP4_1640013 NZ_CAJZAV010000073.1 Protein Homology CDS 7279 8622 . - 0 ID=cds-WP_060074557.1;Parent=gene-LDO49_RS11575;Dbxref=GenBank:WP_060074557.1;Name=WP_060074557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724010.1;locus_tag=LDO49_RS11575;product=DUF3999 domain-containing protein;protein_id=WP_060074557.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 8619 12059 . - . ID=gene-LDO49_RS11580;Name=LDO49_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11580;old_locus_tag=BCEP4_1640014 NZ_CAJZAV010000073.1 Protein Homology CDS 8619 12059 . - 0 ID=cds-WP_124475903.1;Parent=gene-LDO49_RS11580;Dbxref=GenBank:WP_124475903.1;Name=WP_124475903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749911.1;locus_tag=LDO49_RS11580;product=DUF2339 domain-containing protein;protein_id=WP_124475903.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq pseudogene 12351 13835 . + . ID=gene-LDO49_RS11585;Name=LDO49_RS11585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS11585;old_locus_tag=BCEP4_1640016;partial=true;pseudo=true;start_range=.,12351 NZ_CAJZAV010000073.1 Protein Homology CDS 12351 13835 . + 0 ID=cds-LDO49_RS11585;Parent=gene-LDO49_RS11585;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015697,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=quaternary ammonium group transport|0015697||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004266707.1;locus_tag=LDO49_RS11585;partial=true;product=quaternary amine ABC transporter ATP-binding protein;pseudo=true;start_range=.,12351;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 13828 14724 . + . ID=gene-LDO49_RS11590;Name=choW;gbkey=Gene;gene=choW;gene_biotype=protein_coding;locus_tag=LDO49_RS11590;old_locus_tag=BCEP4_1640017 NZ_CAJZAV010000073.1 Protein Homology CDS 13828 14724 . + 0 ID=cds-WP_060225978.1;Parent=gene-LDO49_RS11590;Dbxref=GenBank:WP_060225978.1;Name=WP_060225978.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=choW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880824.1;locus_tag=LDO49_RS11590;product=choline ABC transporter permease subunit;protein_id=WP_060225978.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 14832 15830 . + . ID=gene-LDO49_RS11595;Name=LDO49_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11595;old_locus_tag=BCEP4_1640018 NZ_CAJZAV010000073.1 Protein Homology CDS 14832 15830 . + 0 ID=cds-WP_042978246.1;Parent=gene-LDO49_RS11595;Dbxref=GenBank:WP_042978246.1;Name=WP_042978246.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413023.1;locus_tag=LDO49_RS11595;product=GlxA family transcriptional regulator;protein_id=WP_042978246.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 15935 16882 . + . ID=gene-LDO49_RS11600;Name=LDO49_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11600;old_locus_tag=BCEP4_1640019 NZ_CAJZAV010000073.1 Protein Homology CDS 15935 16882 . + 0 ID=cds-WP_059676536.1;Parent=gene-LDO49_RS11600;Dbxref=GenBank:WP_059676536.1;Name=WP_059676536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354069.1;locus_tag=LDO49_RS11600;product=choline ABC transporter substrate-binding protein;protein_id=WP_059676536.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 17000 18418 . - . ID=gene-LDO49_RS11605;Name=LDO49_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11605;old_locus_tag=BCEP4_1640020 NZ_CAJZAV010000073.1 Protein Homology CDS 17000 18418 . - 0 ID=cds-WP_224051771.1;Parent=gene-LDO49_RS11605;Dbxref=GenBank:WP_224051771.1;Name=WP_224051771.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354070.1;locus_tag=LDO49_RS11605;product=tetratricopeptide repeat protein;protein_id=WP_224051771.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 18554 19510 . - . ID=gene-LDO49_RS11610;Name=LDO49_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11610;old_locus_tag=BCEP4_1640021 NZ_CAJZAV010000073.1 Protein Homology CDS 18554 19510 . - 0 ID=cds-WP_224051773.1;Parent=gene-LDO49_RS11610;Dbxref=GenBank:WP_224051773.1;Name=WP_224051773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603841.1;locus_tag=LDO49_RS11610;product=leucyl aminopeptidase;protein_id=WP_224051773.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 19588 19716 . - . ID=gene-LDO49_RS37290;Name=LDO49_RS37290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37290;old_locus_tag=BCEP4_1640022 NZ_CAJZAV010000073.1 GeneMarkS-2+ CDS 19588 19716 . - 0 ID=cds-WP_021163990.1;Parent=gene-LDO49_RS37290;Dbxref=GenBank:WP_021163990.1;Name=WP_021163990.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37290;product=hypothetical protein;protein_id=WP_021163990.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 20047 20472 . - . ID=gene-LDO49_RS11615;Name=LDO49_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11615;old_locus_tag=BCEP4_1640024 NZ_CAJZAV010000073.1 Protein Homology CDS 20047 20472 . - 0 ID=cds-WP_042978249.1;Parent=gene-LDO49_RS11615;Dbxref=GenBank:WP_042978249.1;Name=WP_042978249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007831914.1;locus_tag=LDO49_RS11615;product=PACE efflux transporter;protein_id=WP_042978249.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 20620 21549 . + . ID=gene-LDO49_RS11620;Name=LDO49_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11620;old_locus_tag=BCEP4_1640025 NZ_CAJZAV010000073.1 Protein Homology CDS 20620 21549 . + 0 ID=cds-WP_219707827.1;Parent=gene-LDO49_RS11620;Dbxref=GenBank:WP_219707827.1;Name=WP_219707827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354073.1;locus_tag=LDO49_RS11620;product=LysR substrate-binding domain-containing protein;protein_id=WP_219707827.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 21595 22746 . - . ID=gene-LDO49_RS11625;Name=LDO49_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11625;old_locus_tag=BCEP4_1640026 NZ_CAJZAV010000073.1 Protein Homology CDS 21595 22746 . - 0 ID=cds-WP_224051775.1;Parent=gene-LDO49_RS11625;Dbxref=GenBank:WP_224051775.1;Name=WP_224051775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480576.1;locus_tag=LDO49_RS11625;product=WD40/YVTN/BNR-like repeat-containing protein;protein_id=WP_224051775.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 22814 23083 . - . ID=gene-LDO49_RS11630;Name=LDO49_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11630;old_locus_tag=BCEP4_1640027 NZ_CAJZAV010000073.1 Protein Homology CDS 22814 23083 . - 0 ID=cds-WP_021156351.1;Parent=gene-LDO49_RS11630;Dbxref=GenBank:WP_021156351.1;Name=WP_021156351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547022.1;locus_tag=LDO49_RS11630;product=MoaD/ThiS family protein;protein_id=WP_021156351.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 23319 23684 . + . ID=gene-LDO49_RS11635;Name=LDO49_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11635;old_locus_tag=BCEP4_1640028 NZ_CAJZAV010000073.1 Protein Homology CDS 23319 23684 . + 0 ID=cds-WP_224051776.1;Parent=gene-LDO49_RS11635;Dbxref=GenBank:WP_224051776.1;Name=WP_224051776.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354076.1;locus_tag=LDO49_RS11635;product=ASCH domain-containing protein;protein_id=WP_224051776.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 23778 24467 . - . ID=gene-LDO49_RS11640;Name=LDO49_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11640;old_locus_tag=BCEP4_1640029 NZ_CAJZAV010000073.1 Protein Homology CDS 23778 24467 . - 0 ID=cds-WP_224051777.1;Parent=gene-LDO49_RS11640;Dbxref=GenBank:WP_224051777.1;Name=WP_224051777.1;Ontology_term=GO:0018193;gbkey=CDS;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898461.1;locus_tag=LDO49_RS11640;product=aspartyl/asparaginyl beta-hydroxylase domain-containing protein;protein_id=WP_224051777.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 24709 25053 . + . ID=gene-LDO49_RS11645;Name=LDO49_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11645;old_locus_tag=BCEP4_1640030 NZ_CAJZAV010000073.1 Protein Homology CDS 24709 25053 . + 0 ID=cds-WP_060074562.1;Parent=gene-LDO49_RS11645;Dbxref=GenBank:WP_060074562.1;Name=WP_060074562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480580.1;locus_tag=LDO49_RS11645;product=DUF4148 domain-containing protein;protein_id=WP_060074562.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 25125 25400 . + . ID=gene-LDO49_RS11650;Name=LDO49_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11650;old_locus_tag=BCEP4_1640031 NZ_CAJZAV010000073.1 Protein Homology CDS 25125 25400 . + 0 ID=cds-WP_048025501.1;Parent=gene-LDO49_RS11650;Dbxref=GenBank:WP_048025501.1;Name=WP_048025501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749900.1;locus_tag=LDO49_RS11650;product=DUF4148 domain-containing protein;protein_id=WP_048025501.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 25668 26195 . - . ID=gene-LDO49_RS11655;Name=LDO49_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11655;old_locus_tag=BCEP4_1640032 NZ_CAJZAV010000073.1 Protein Homology CDS 25668 26195 . - 0 ID=cds-WP_021156345.1;Parent=gene-LDO49_RS11655;Dbxref=GenBank:WP_021156345.1;Name=WP_021156345.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749899.1;locus_tag=LDO49_RS11655;product=cytochrome b;protein_id=WP_021156345.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 26265 27719 . - . ID=gene-LDO49_RS11660;Name=LDO49_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11660;old_locus_tag=BCEP4_1640033 NZ_CAJZAV010000073.1 Protein Homology CDS 26265 27719 . - 0 ID=cds-WP_042972677.1;Parent=gene-LDO49_RS11660;Dbxref=GenBank:WP_042972677.1;Name=WP_042972677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690709.1;locus_tag=LDO49_RS11660;product=ATP-binding protein;protein_id=WP_042972677.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 27716 28375 . - . ID=gene-LDO49_RS11665;Name=LDO49_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11665;old_locus_tag=BCEP4_1640034 NZ_CAJZAV010000073.1 Protein Homology CDS 27716 28375 . - 0 ID=cds-WP_021156343.1;Parent=gene-LDO49_RS11665;Dbxref=GenBank:WP_021156343.1;Name=WP_021156343.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690708.1;locus_tag=LDO49_RS11665;product=response regulator;protein_id=WP_021156343.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 28374 29006 . + . ID=gene-LDO49_RS11670;Name=LDO49_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11670 NZ_CAJZAV010000073.1 GeneMarkS-2+ CDS 28374 29006 . + 0 ID=cds-WP_060074563.1;Parent=gene-LDO49_RS11670;Dbxref=GenBank:WP_060074563.1;Name=WP_060074563.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS11670;product=hypothetical protein;protein_id=WP_060074563.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 29072 30241 . + . ID=gene-LDO49_RS11675;Name=hpnI;gbkey=Gene;gene=hpnI;gene_biotype=protein_coding;locus_tag=LDO49_RS11675;old_locus_tag=BCEP4_1640036 NZ_CAJZAV010000073.1 Protein Homology CDS 29072 30241 . + 0 ID=cds-WP_124475902.1;Parent=gene-LDO49_RS11675;Dbxref=GenBank:WP_124475902.1;Name=WP_124475902.1;Ontology_term=GO:0016757;gbkey=CDS;gene=hpnI;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354082.1;locus_tag=LDO49_RS11675;product=bacteriohopanetetrol glucosamine biosynthesis glycosyltransferase HpnI;protein_id=WP_124475902.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 30238 31323 . + . ID=gene-LDO49_RS11680;Name=LDO49_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11680;old_locus_tag=BCEP4_1640037 NZ_CAJZAV010000073.1 Protein Homology CDS 30238 31323 . + 0 ID=cds-WP_224051778.1;Parent=gene-LDO49_RS11680;Dbxref=GenBank:WP_224051778.1;Name=WP_224051778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354083.1;locus_tag=LDO49_RS11680;product=lysylphosphatidylglycerol synthase domain-containing protein;protein_id=WP_224051778.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 31367 32338 . - . ID=gene-LDO49_RS11685;Name=denD;gbkey=Gene;gene=denD;gene_biotype=protein_coding;locus_tag=LDO49_RS11685;old_locus_tag=BCEP4_1640038 NZ_CAJZAV010000073.1 Protein Homology CDS 31367 32338 . - 0 ID=cds-WP_021156339.1;Parent=gene-LDO49_RS11685;Dbxref=GenBank:WP_021156339.1;Name=WP_021156339.1;Ontology_term=GO:0005975,GO:0016491;gbkey=CDS;gene=denD;go_function=oxidoreductase activity|0016491||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009972027.1;locus_tag=LDO49_RS11685;product=D-erythronate dehydrogenase;protein_id=WP_021156339.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 32367 33146 . - . ID=gene-LDO49_RS11690;Name=otnI;gbkey=Gene;gene=otnI;gene_biotype=protein_coding;locus_tag=LDO49_RS11690;old_locus_tag=BCEP4_1640039 NZ_CAJZAV010000073.1 Protein Homology CDS 32367 33146 . - 0 ID=cds-WP_021156338.1;Parent=gene-LDO49_RS11690;Dbxref=GenBank:WP_021156338.1;Name=WP_021156338.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;gene=otnI;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366777.1;locus_tag=LDO49_RS11690;product=2-oxo-tetronate isomerase;protein_id=WP_021156338.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 33215 34540 . - . ID=gene-LDO49_RS11695;Name=LDO49_RS11695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11695;old_locus_tag=BCEP4_1640040 NZ_CAJZAV010000073.1 Protein Homology CDS 33215 34540 . - 0 ID=cds-WP_059487089.1;Parent=gene-LDO49_RS11695;Dbxref=GenBank:WP_059487089.1;Name=WP_059487089.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331335.1;locus_tag=LDO49_RS11695;product=MFS transporter;protein_id=WP_059487089.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 34654 35292 . - . ID=gene-LDO49_RS11700;Name=otnC;gbkey=Gene;gene=otnC;gene_biotype=protein_coding;locus_tag=LDO49_RS11700;old_locus_tag=BCEP4_1640041 NZ_CAJZAV010000073.1 Protein Homology CDS 34654 35292 . - 0 ID=cds-WP_021156336.1;Parent=gene-LDO49_RS11700;Dbxref=GenBank:WP_021156336.1;Name=WP_021156336.1;Ontology_term=GO:0005996,GO:0016829;gbkey=CDS;gene=otnC;go_function=lyase activity|0016829||IEA;go_process=monosaccharide metabolic process|0005996||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766428.1;locus_tag=LDO49_RS11700;product=3-oxo-tetronate 4-phosphate decarboxylase;protein_id=WP_021156336.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 35289 36590 . - . ID=gene-LDO49_RS11705;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=LDO49_RS11705;old_locus_tag=BCEP4_1640042 NZ_CAJZAV010000073.1 Protein Homology CDS 35289 36590 . - 0 ID=cds-WP_059585788.1;Parent=gene-LDO49_RS11705;Dbxref=GenBank:WP_059585788.1;Name=WP_059585788.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496823.1;locus_tag=LDO49_RS11705;product=3-oxo-tetronate kinase;protein_id=WP_059585788.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq pseudogene 36610 37512 . - . ID=gene-LDO49_RS11710;Name=ltnD;end_range=37512,.;gbkey=Gene;gene=ltnD;gene_biotype=pseudogene;locus_tag=LDO49_RS11710;old_locus_tag=BCEP4_1640043;partial=true;pseudo=true NZ_CAJZAV010000073.1 Protein Homology CDS 36610 37512 . - 0 ID=cds-LDO49_RS11710;Parent=gene-LDO49_RS11710;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005975,GO:0016616;end_range=37512,.;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200843.1;locus_tag=LDO49_RS11710;partial=true;product=L-threonate dehydrogenase;pseudo=true;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 37571 38275 . - . ID=gene-LDO49_RS11715;Name=LDO49_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11715;old_locus_tag=BCEP4_1640044 NZ_CAJZAV010000073.1 Protein Homology CDS 37571 38275 . - 0 ID=cds-WP_048025492.1;Parent=gene-LDO49_RS11715;Dbxref=GenBank:WP_048025492.1;Name=WP_048025492.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354089.1;locus_tag=LDO49_RS11715;product=FadR/GntR family transcriptional regulator;protein_id=WP_048025492.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 38476 39549 . - . ID=gene-LDO49_RS11720;Name=LDO49_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11720;old_locus_tag=BCEP4_1640046 NZ_CAJZAV010000073.1 Protein Homology CDS 38476 39549 . - 0 ID=cds-WP_027790627.1;Parent=gene-LDO49_RS11720;Dbxref=GenBank:WP_027790627.1;Name=WP_027790627.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489138.1;locus_tag=LDO49_RS11720;product=GlxA family transcriptional regulator;protein_id=WP_027790627.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 39852 41237 . + . ID=gene-LDO49_RS11725;Name=LDO49_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11725;old_locus_tag=BCEP4_1640048 NZ_CAJZAV010000073.1 Protein Homology CDS 39852 41237 . + 0 ID=cds-WP_027790628.1;Parent=gene-LDO49_RS11725;Dbxref=GenBank:WP_027790628.1;Name=WP_027790628.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009981714.1;locus_tag=LDO49_RS11725;product=L-serine ammonia-lyase;protein_id=WP_027790628.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 41252 42496 . + . ID=gene-LDO49_RS11730;Name=LDO49_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11730;old_locus_tag=BCEP4_1640047 NZ_CAJZAV010000073.1 Protein Homology CDS 41252 42496 . + 0 ID=cds-WP_006480591.1;Parent=gene-LDO49_RS11730;Dbxref=GenBank:WP_006480591.1;Name=WP_006480591.1;Ontology_term=GO:0046653,GO:0008115;gbkey=CDS;go_function=sarcosine oxidase activity|0008115||IEA;go_process=tetrahydrofolate metabolic process|0046653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017773687.1;locus_tag=LDO49_RS11730;product=sarcosine oxidase subunit beta family protein;protein_id=WP_006480591.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 42513 42812 . + . ID=gene-LDO49_RS11735;Name=LDO49_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11735;old_locus_tag=BCEP4_1640049 NZ_CAJZAV010000073.1 Protein Homology CDS 42513 42812 . + 0 ID=cds-WP_027790629.1;Parent=gene-LDO49_RS11735;Dbxref=GenBank:WP_027790629.1;Name=WP_027790629.1;Ontology_term=GO:0046653,GO:0008115,GO:0046872;gbkey=CDS;go_function=sarcosine oxidase activity|0008115||IEA,metal ion binding|0046872||IEA;go_process=tetrahydrofolate metabolic process|0046653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547035.1;locus_tag=LDO49_RS11735;product=sarcosine oxidase subunit delta;protein_id=WP_027790629.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 42809 45820 . + . ID=gene-LDO49_RS11740;Name=LDO49_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11740;old_locus_tag=BCEP4_1640050 NZ_CAJZAV010000073.1 Protein Homology CDS 42809 45820 . + 0 ID=cds-WP_224051779.1;Parent=gene-LDO49_RS11740;Dbxref=GenBank:WP_224051779.1;Name=WP_224051779.1;Ontology_term=GO:0046653,GO:0008115;gbkey=CDS;go_function=sarcosine oxidase activity|0008115||IEA;go_process=tetrahydrofolate metabolic process|0046653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354097.1;locus_tag=LDO49_RS11740;product=sarcosine oxidase subunit alpha family protein;protein_id=WP_224051779.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 45810 46442 . + . ID=gene-LDO49_RS11745;Name=LDO49_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11745;old_locus_tag=BCEP4_1640051 NZ_CAJZAV010000073.1 Protein Homology CDS 45810 46442 . + 0 ID=cds-WP_048025495.1;Parent=gene-LDO49_RS11745;Dbxref=GenBank:WP_048025495.1;Name=WP_048025495.1;Ontology_term=GO:1901053,GO:0008115;gbkey=CDS;go_function=sarcosine oxidase activity|0008115||IEA;go_process=sarcosine catabolic process|1901053||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496827.1;locus_tag=LDO49_RS11745;product=sarcosine oxidase subunit gamma;protein_id=WP_048025495.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 46439 46879 . + . ID=gene-LDO49_RS11750;Name=LDO49_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11750;old_locus_tag=BCEP4_1640052 NZ_CAJZAV010000073.1 Protein Homology CDS 46439 46879 . + 0 ID=cds-WP_011354099.1;Parent=gene-LDO49_RS11750;Dbxref=GenBank:WP_011354099.1;Name=WP_011354099.1;Ontology_term=GO:0046654,GO:0046656,GO:0004150;gbkey=CDS;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA,folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354099.1;locus_tag=LDO49_RS11750;product=dihydroneopterin aldolase;protein_id=WP_011354099.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 47135 47461 . + . ID=gene-LDO49_RS11755;Name=LDO49_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11755;old_locus_tag=BCEP4_1640053 NZ_CAJZAV010000073.1 Protein Homology CDS 47135 47461 . + 0 ID=cds-WP_104766704.1;Parent=gene-LDO49_RS11755;Dbxref=GenBank:WP_104766704.1;Name=WP_104766704.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757383.1;locus_tag=LDO49_RS11755;product=helix-turn-helix domain-containing protein;protein_id=WP_104766704.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 47461 48813 . + . ID=gene-LDO49_RS11760;Name=LDO49_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11760;old_locus_tag=BCEP4_1640054 NZ_CAJZAV010000073.1 Protein Homology CDS 47461 48813 . + 0 ID=cds-WP_224051780.1;Parent=gene-LDO49_RS11760;Dbxref=GenBank:WP_224051780.1;Name=WP_224051780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757382.1;locus_tag=LDO49_RS11760;product=HipA domain-containing protein;protein_id=WP_224051780.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 48886 49959 . - . ID=gene-LDO49_RS11765;Name=LDO49_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11765;old_locus_tag=BCEP4_1640055 NZ_CAJZAV010000073.1 Protein Homology CDS 48886 49959 . - 0 ID=cds-WP_060074567.1;Parent=gene-LDO49_RS11765;Dbxref=GenBank:WP_060074567.1;Name=WP_060074567.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003265228.1;locus_tag=LDO49_RS11765;product=alkene reductase;protein_id=WP_060074567.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 50128 51003 . + . ID=gene-LDO49_RS11770;Name=LDO49_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11770;old_locus_tag=BCEP4_1640056 NZ_CAJZAV010000073.1 Protein Homology CDS 50128 51003 . + 0 ID=cds-WP_060074568.1;Parent=gene-LDO49_RS11770;Dbxref=GenBank:WP_060074568.1;Name=WP_060074568.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749882.1;locus_tag=LDO49_RS11770;product=LysR family transcriptional regulator;protein_id=WP_060074568.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 51034 51462 . - . ID=gene-LDO49_RS11775;Name=LDO49_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11775;old_locus_tag=BCEP4_1640057 NZ_CAJZAV010000073.1 Protein Homology CDS 51034 51462 . - 0 ID=cds-WP_224051781.1;Parent=gene-LDO49_RS11775;Dbxref=GenBank:WP_224051781.1;Name=WP_224051781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749881.1;locus_tag=LDO49_RS11775;product=lysozyme inhibitor LprI family protein;protein_id=WP_224051781.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 51490 52170 . - . ID=gene-LDO49_RS11780;Name=LDO49_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11780;old_locus_tag=BCEP4_1640058 NZ_CAJZAV010000073.1 Protein Homology CDS 51490 52170 . - 0 ID=cds-WP_224051783.1;Parent=gene-LDO49_RS11780;Dbxref=GenBank:WP_224051783.1;Name=WP_224051783.1;Ontology_term=GO:0000270,GO:0071555,GO:0008933,GO:0016787;gbkey=CDS;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480599.1;locus_tag=LDO49_RS11780;product=lytic transglycosylase domain-containing protein;protein_id=WP_224051783.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 52328 52723 . - . ID=gene-LDO49_RS11785;Name=arr;gbkey=Gene;gene=arr;gene_biotype=protein_coding;locus_tag=LDO49_RS11785;old_locus_tag=BCEP4_1640059 NZ_CAJZAV010000073.1 Protein Homology CDS 52328 52723 . - 0 ID=cds-WP_048024889.1;Parent=gene-LDO49_RS11785;Dbxref=GenBank:WP_048024889.1;Name=WP_048024889.1;gbkey=CDS;gene=arr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489117.1;locus_tag=LDO49_RS11785;product=NAD(+)--rifampin ADP-ribosyltransferase;protein_id=WP_048024889.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 52770 53540 . - . ID=gene-LDO49_RS11790;Name=LDO49_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11790;old_locus_tag=BCEP4_1640060 NZ_CAJZAV010000073.1 Protein Homology CDS 52770 53540 . - 0 ID=cds-WP_104766717.1;Parent=gene-LDO49_RS11790;Dbxref=GenBank:WP_104766717.1;Name=WP_104766717.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339479.1;locus_tag=LDO49_RS11790;product=ABC transporter permease;protein_id=WP_104766717.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 53555 54502 . - . ID=gene-LDO49_RS11795;Name=LDO49_RS11795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11795;old_locus_tag=BCEP4_1640061 NZ_CAJZAV010000073.1 Protein Homology CDS 53555 54502 . - 0 ID=cds-WP_224051784.1;Parent=gene-LDO49_RS11795;Dbxref=GenBank:WP_224051784.1;Name=WP_224051784.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115358.1;locus_tag=LDO49_RS11795;product=ABC transporter ATP-binding protein;protein_id=WP_224051784.1;transl_table=11 NZ_CAJZAV010000073.1 RefSeq gene 54499 55090 . - . ID=gene-LDO49_RS11800;Name=LDO49_RS11800;end_range=55090,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11800;old_locus_tag=BCEP4_1640062;partial=true NZ_CAJZAV010000073.1 Protein Homology CDS 54499 55090 . - 1 ID=cds-WP_224051786.1;Parent=gene-LDO49_RS11800;Dbxref=GenBank:WP_224051786.1;Name=WP_224051786.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;end_range=55090,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496830.1;locus_tag=LDO49_RS11800;partial=true;product=ABC transporter permease;protein_id=WP_224051786.1;transl_table=11 ##sequence-region NZ_CAJZAV010000074.1 1 36335 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000074.1 RefSeq region 1 36335 . + . ID=NZ_CAJZAV010000074.1:1..36335;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_165 NZ_CAJZAV010000074.1 RefSeq gene 1 192 . - . ID=gene-LDO49_RS11805;Name=LDO49_RS11805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11805;partial=true;start_range=.,1 NZ_CAJZAV010000074.1 Protein Homology CDS 1 192 . - 0 ID=cds-WP_224051787.1;Parent=gene-LDO49_RS11805;Dbxref=GenBank:WP_224051787.1;Name=WP_224051787.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007178953.1;locus_tag=LDO49_RS11805;partial=true;product=transposase;protein_id=WP_224051787.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 1027 1413 . + . ID=gene-LDO49_RS11810;Name=LDO49_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11810;old_locus_tag=BCEP4_1650003 NZ_CAJZAV010000074.1 GeneMarkS-2+ CDS 1027 1413 . + 0 ID=cds-WP_124475514.1;Parent=gene-LDO49_RS11810;Dbxref=GenBank:WP_124475514.1;Name=WP_124475514.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS11810;product=hypothetical protein;protein_id=WP_124475514.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 1664 2425 . - . ID=gene-LDO49_RS11815;Name=LDO49_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11815;old_locus_tag=BCEP4_1650004 NZ_CAJZAV010000074.1 Protein Homology CDS 1664 2425 . - 0 ID=cds-WP_224051788.1;Parent=gene-LDO49_RS11815;Dbxref=GenBank:WP_224051788.1;Name=WP_224051788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028572.1;locus_tag=LDO49_RS11815;product=VUT family protein;protein_id=WP_224051788.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 2874 3344 . - . ID=gene-LDO49_RS11820;Name=LDO49_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11820;old_locus_tag=BCEP4_1650005 NZ_CAJZAV010000074.1 Protein Homology CDS 2874 3344 . - 0 ID=cds-WP_059677783.1;Parent=gene-LDO49_RS11820;Dbxref=GenBank:WP_059677783.1;Name=WP_059677783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757999.1;locus_tag=LDO49_RS11820;product=plasmid fertility inhibition factor family protein;protein_id=WP_059677783.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 3670 4092 . + . ID=gene-LDO49_RS11825;Name=LDO49_RS11825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11825;old_locus_tag=BCEP4_1650006 NZ_CAJZAV010000074.1 Protein Homology CDS 3670 4092 . + 0 ID=cds-WP_060069879.1;Parent=gene-LDO49_RS11825;Dbxref=GenBank:WP_060069879.1;Name=WP_060069879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351869.1;locus_tag=LDO49_RS11825;product=hypothetical protein;protein_id=WP_060069879.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 4304 4930 . + . ID=gene-LDO49_RS11830;Name=LDO49_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11830;old_locus_tag=BCEP4_1650007 NZ_CAJZAV010000074.1 Protein Homology CDS 4304 4930 . + 0 ID=cds-WP_060069881.1;Parent=gene-LDO49_RS11830;Dbxref=GenBank:WP_060069881.1;Name=WP_060069881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351870.1;locus_tag=LDO49_RS11830;product=hypothetical protein;protein_id=WP_060069881.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 5351 6103 . - . ID=gene-LDO49_RS11835;Name=LDO49_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11835;old_locus_tag=BCEP4_1650009 NZ_CAJZAV010000074.1 Protein Homology CDS 5351 6103 . - 0 ID=cds-WP_060069883.1;Parent=gene-LDO49_RS11835;Dbxref=GenBank:WP_060069883.1;Name=WP_060069883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757998.1;locus_tag=LDO49_RS11835;product=DUF695 domain-containing protein;protein_id=WP_060069883.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 6190 6573 . + . ID=gene-LDO49_RS11840;Name=LDO49_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11840;old_locus_tag=BCEP4_1650011 NZ_CAJZAV010000074.1 GeneMarkS-2+ CDS 6190 6573 . + 0 ID=cds-WP_059496093.1;Parent=gene-LDO49_RS11840;Dbxref=GenBank:WP_059496093.1;Name=WP_059496093.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS11840;product=VOC family protein;protein_id=WP_059496093.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 6621 6929 . + . ID=gene-LDO49_RS11845;Name=LDO49_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11845;old_locus_tag=BCEP4_1650010 NZ_CAJZAV010000074.1 Protein Homology CDS 6621 6929 . + 0 ID=cds-WP_048020799.1;Parent=gene-LDO49_RS11845;Dbxref=GenBank:WP_048020799.1;Name=WP_048020799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545327.1;locus_tag=LDO49_RS11845;product=phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase;protein_id=WP_048020799.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 7135 7377 . + . ID=gene-LDO49_RS37380;Name=LDO49_RS37380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37380;old_locus_tag=BCEP4_1650012 NZ_CAJZAV010000074.1 Protein Homology CDS 7135 7377 . + 0 ID=cds-WP_081052453.1;Parent=gene-LDO49_RS37380;Dbxref=GenBank:WP_081052453.1;Name=WP_081052453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751009.1;locus_tag=LDO49_RS37380;product=hypothetical protein;protein_id=WP_081052453.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 7556 8098 . + . ID=gene-LDO49_RS11855;Name=LDO49_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11855;old_locus_tag=BCEP4_1650013 NZ_CAJZAV010000074.1 Protein Homology CDS 7556 8098 . + 0 ID=cds-WP_060069959.1;Parent=gene-LDO49_RS11855;Dbxref=GenBank:WP_060069959.1;Name=WP_060069959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328423.1;locus_tag=LDO49_RS11855;product=hypothetical protein;protein_id=WP_060069959.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 8261 8734 . + . ID=gene-LDO49_RS11860;Name=LDO49_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11860;old_locus_tag=BCEP4_1650014 NZ_CAJZAV010000074.1 Protein Homology CDS 8261 8734 . + 0 ID=cds-WP_021156992.1;Parent=gene-LDO49_RS11860;Dbxref=GenBank:WP_021156992.1;Name=WP_021156992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363804.1;locus_tag=LDO49_RS11860;product=VOC family protein;protein_id=WP_021156992.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 8786 9757 . - . ID=gene-LDO49_RS11865;Name=LDO49_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11865;old_locus_tag=BCEP4_1650015 NZ_CAJZAV010000074.1 Protein Homology CDS 8786 9757 . - 0 ID=cds-WP_060069885.1;Parent=gene-LDO49_RS11865;Dbxref=GenBank:WP_060069885.1;Name=WP_060069885.1;Ontology_term=GO:0005515,GO:0046872,GO:0052621;gbkey=CDS;go_function=protein binding|0005515||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484192.1;locus_tag=LDO49_RS11865;product=sensor domain-containing diguanylate cyclase;protein_id=WP_060069885.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 10022 10249 . + . ID=gene-LDO49_RS11870;Name=LDO49_RS11870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11870;old_locus_tag=BCEP4_1650016 NZ_CAJZAV010000074.1 Protein Homology CDS 10022 10249 . + 0 ID=cds-WP_021156995.1;Parent=gene-LDO49_RS11870;Dbxref=GenBank:WP_021156995.1;Name=WP_021156995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545331.1;locus_tag=LDO49_RS11870;product=hypothetical protein;protein_id=WP_021156995.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 10350 10973 . - . ID=gene-LDO49_RS11875;Name=LDO49_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11875;old_locus_tag=BCEP4_1650017 NZ_CAJZAV010000074.1 Protein Homology CDS 10350 10973 . - 0 ID=cds-WP_027787490.1;Parent=gene-LDO49_RS11875;Dbxref=GenBank:WP_027787490.1;Name=WP_027787490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351878.1;locus_tag=LDO49_RS11875;product=phospholipase D family nuclease;protein_id=WP_027787490.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 11318 11806 . - . ID=gene-LDO49_RS11880;Name=LDO49_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11880;old_locus_tag=BCEP4_1650018 NZ_CAJZAV010000074.1 Protein Homology CDS 11318 11806 . - 0 ID=cds-WP_021156997.1;Parent=gene-LDO49_RS11880;Dbxref=GenBank:WP_021156997.1;Name=WP_021156997.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495227.1;locus_tag=LDO49_RS11880;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_021156997.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 11976 12413 . + . ID=gene-LDO49_RS11885;Name=LDO49_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11885;old_locus_tag=BCEP4_1650019 NZ_CAJZAV010000074.1 Protein Homology CDS 11976 12413 . + 0 ID=cds-WP_021156998.1;Parent=gene-LDO49_RS11885;Dbxref=GenBank:WP_021156998.1;Name=WP_021156998.1;Ontology_term=GO:0016790,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332380.1;locus_tag=LDO49_RS11885;product=PaaI family thioesterase;protein_id=WP_021156998.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 12562 13614 . + . ID=gene-LDO49_RS11890;Name=LDO49_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11890;old_locus_tag=BCEP4_1650020 NZ_CAJZAV010000074.1 Protein Homology CDS 12562 13614 . + 0 ID=cds-WP_059623479.1;Parent=gene-LDO49_RS11890;Dbxref=GenBank:WP_059623479.1;Name=WP_059623479.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601897.1;locus_tag=LDO49_RS11890;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_059623479.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 13698 14984 . - . ID=gene-LDO49_RS11895;Name=LDO49_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11895;old_locus_tag=BCEP4_1650021 NZ_CAJZAV010000074.1 Protein Homology CDS 13698 14984 . - 0 ID=cds-WP_060069887.1;Parent=gene-LDO49_RS11895;Dbxref=GenBank:WP_060069887.1;Name=WP_060069887.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545336.1;locus_tag=LDO49_RS11895;product=MFS transporter;protein_id=WP_060069887.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 15020 16441 . - . ID=gene-LDO49_RS11900;Name=LDO49_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11900;old_locus_tag=BCEP4_1650022 NZ_CAJZAV010000074.1 Protein Homology CDS 15020 16441 . - 0 ID=cds-WP_059496083.1;Parent=gene-LDO49_RS11900;Dbxref=GenBank:WP_059496083.1;Name=WP_059496083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751000.1;locus_tag=LDO49_RS11900;product=M20 family metallopeptidase;protein_id=WP_059496083.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 16608 17561 . + . ID=gene-LDO49_RS11905;Name=LDO49_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11905;old_locus_tag=BCEP4_1650023 NZ_CAJZAV010000074.1 Protein Homology CDS 16608 17561 . + 0 ID=cds-WP_059484538.1;Parent=gene-LDO49_RS11905;Dbxref=GenBank:WP_059484538.1;Name=WP_059484538.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495222.1;locus_tag=LDO49_RS11905;product=LysR family transcriptional regulator;protein_id=WP_059484538.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 17626 18753 . + . ID=gene-LDO49_RS11910;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=LDO49_RS11910;old_locus_tag=BCEP4_1650024 NZ_CAJZAV010000074.1 Protein Homology CDS 17626 18753 . + 0 ID=cds-WP_060069889.1;Parent=gene-LDO49_RS11910;Dbxref=GenBank:WP_060069889.1;Name=WP_060069889.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897121.1;locus_tag=LDO49_RS11910;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_060069889.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 18750 19808 . + . ID=gene-LDO49_RS11915;Name=LDO49_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11915;old_locus_tag=BCEP4_1650025 NZ_CAJZAV010000074.1 Protein Homology CDS 18750 19808 . + 0 ID=cds-WP_059817145.1;Parent=gene-LDO49_RS11915;Dbxref=GenBank:WP_059817145.1;Name=WP_059817145.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400158.1;locus_tag=LDO49_RS11915;product=permease;protein_id=WP_059817145.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 19910 20332 . + . ID=gene-LDO49_RS11920;Name=LDO49_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11920;old_locus_tag=BCEP4_1650026 NZ_CAJZAV010000074.1 Protein Homology CDS 19910 20332 . + 0 ID=cds-WP_224051789.1;Parent=gene-LDO49_RS11920;Dbxref=GenBank:WP_224051789.1;Name=WP_224051789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897119.1;locus_tag=LDO49_RS11920;product=hypothetical protein;protein_id=WP_224051789.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 20370 21203 . - . ID=gene-LDO49_RS11925;Name=LDO49_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11925;old_locus_tag=BCEP4_1650027 NZ_CAJZAV010000074.1 Protein Homology CDS 20370 21203 . - 0 ID=cds-WP_059484540.1;Parent=gene-LDO49_RS11925;Dbxref=GenBank:WP_059484540.1;Name=WP_059484540.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545341.1;locus_tag=LDO49_RS11925;product=ABC transporter permease;protein_id=WP_059484540.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 21210 22124 . - . ID=gene-LDO49_RS11930;Name=nodI;gbkey=Gene;gene=nodI;gene_biotype=protein_coding;locus_tag=LDO49_RS11930;old_locus_tag=BCEP4_1650028 NZ_CAJZAV010000074.1 Protein Homology CDS 21210 22124 . - 0 ID=cds-WP_021157008.1;Parent=gene-LDO49_RS11930;Dbxref=GenBank:WP_021157008.1;Name=WP_021157008.1;gbkey=CDS;gene=nodI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897117.1;locus_tag=LDO49_RS11930;product=nodulation factor ABC transporter ATP-binding protein NodI;protein_id=WP_021157008.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 22462 22959 . + . ID=gene-LDO49_RS11935;Name=LDO49_RS11935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11935;old_locus_tag=BCEP4_1650029 NZ_CAJZAV010000074.1 Protein Homology CDS 22462 22959 . + 0 ID=cds-WP_021157010.1;Parent=gene-LDO49_RS11935;Dbxref=GenBank:WP_021157010.1;Name=WP_021157010.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351890.1;locus_tag=LDO49_RS11935;product=universal stress protein;protein_id=WP_021157010.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 23077 23790 . - . ID=gene-LDO49_RS11940;Name=LDO49_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11940;old_locus_tag=BCEP4_1650030 NZ_CAJZAV010000074.1 Protein Homology CDS 23077 23790 . - 0 ID=cds-WP_060069891.1;Parent=gene-LDO49_RS11940;Dbxref=GenBank:WP_060069891.1;Name=WP_060069891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545344.1;locus_tag=LDO49_RS11940;product=DUF2939 domain-containing protein;protein_id=WP_060069891.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 23820 24155 . - . ID=gene-LDO49_RS11945;Name=LDO49_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11945;old_locus_tag=BCEP4_1650031 NZ_CAJZAV010000074.1 Protein Homology CDS 23820 24155 . - 0 ID=cds-WP_006476078.1;Parent=gene-LDO49_RS11945;Dbxref=GenBank:WP_006476078.1;Name=WP_006476078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600929.1;locus_tag=LDO49_RS11945;product=hypothetical protein;protein_id=WP_006476078.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 24182 24829 . - . ID=gene-LDO49_RS11950;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=LDO49_RS11950;old_locus_tag=BCEP4_1650032 NZ_CAJZAV010000074.1 Protein Homology CDS 24182 24829 . - 0 ID=cds-WP_006754655.1;Parent=gene-LDO49_RS11950;Dbxref=GenBank:WP_006754655.1;Name=WP_006754655.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400150.1;locus_tag=LDO49_RS11950;product=transcriptional repressor LexA;protein_id=WP_006754655.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 25094 26131 . + . ID=gene-LDO49_RS11955;Name=LDO49_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11955;old_locus_tag=BCEP4_1650033 NZ_CAJZAV010000074.1 Protein Homology CDS 25094 26131 . + 0 ID=cds-WP_124843353.1;Parent=gene-LDO49_RS11955;Dbxref=GenBank:WP_124843353.1;Name=WP_124843353.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400148.1;locus_tag=LDO49_RS11955;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_124843353.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 26254 27147 . + . ID=gene-LDO49_RS11960;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=LDO49_RS11960;old_locus_tag=BCEP4_1650035 NZ_CAJZAV010000074.1 Protein Homology CDS 26254 27147 . + 0 ID=cds-WP_021157013.1;Parent=gene-LDO49_RS11960;Dbxref=GenBank:WP_021157013.1;Name=WP_021157013.1;Ontology_term=GO:1902358,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysT;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759461.1;locus_tag=LDO49_RS11960;product=sulfate ABC transporter permease subunit CysT;protein_id=WP_021157013.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 27144 28091 . + . ID=gene-LDO49_RS11965;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=LDO49_RS11965;old_locus_tag=BCEP4_1650034 NZ_CAJZAV010000074.1 Protein Homology CDS 27144 28091 . + 0 ID=cds-WP_021157014.1;Parent=gene-LDO49_RS11965;Dbxref=GenBank:WP_021157014.1;Name=WP_021157014.1;Ontology_term=GO:1902358,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysW;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213386.1;locus_tag=LDO49_RS11965;product=sulfate ABC transporter permease subunit CysW;protein_id=WP_021157014.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 28105 29163 . + . ID=gene-LDO49_RS11970;Name=LDO49_RS11970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11970;old_locus_tag=BCEP4_1650036 NZ_CAJZAV010000074.1 Protein Homology CDS 28105 29163 . + 0 ID=cds-WP_021157015.1;Parent=gene-LDO49_RS11970;Dbxref=GenBank:WP_021157015.1;Name=WP_021157015.1;Ontology_term=GO:0005524,GO:0015419,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192434.1;locus_tag=LDO49_RS11970;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=WP_021157015.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 29239 30165 . + . ID=gene-LDO49_RS11975;Name=LDO49_RS11975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11975;old_locus_tag=BCEP4_1650037 NZ_CAJZAV010000074.1 Protein Homology CDS 29239 30165 . + 0 ID=cds-WP_006484201.1;Parent=gene-LDO49_RS11975;Dbxref=GenBank:WP_006484201.1;Name=WP_006484201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884743.1;locus_tag=LDO49_RS11975;product=CysB family HTH-type transcriptional regulator;protein_id=WP_006484201.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 30666 31052 . + . ID=gene-LDO49_RS11980;Name=LDO49_RS11980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11980;old_locus_tag=BCEP4_1650038 NZ_CAJZAV010000074.1 Protein Homology CDS 30666 31052 . + 0 ID=cds-WP_059484544.1;Parent=gene-LDO49_RS11980;Dbxref=GenBank:WP_059484544.1;Name=WP_059484544.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF017470.6;locus_tag=LDO49_RS11980;product=DUF805 domain-containing protein;protein_id=WP_059484544.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 31330 32280 . + . ID=gene-LDO49_RS11985;Name=LDO49_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11985;old_locus_tag=BCEP4_1650039 NZ_CAJZAV010000074.1 Protein Homology CDS 31330 32280 . + 0 ID=cds-WP_021157018.1;Parent=gene-LDO49_RS11985;Dbxref=GenBank:WP_021157018.1;Name=WP_021157018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332399.1;locus_tag=LDO49_RS11985;product=sugar ABC transporter substrate-binding protein;protein_id=WP_021157018.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 32426 34039 . + . ID=gene-LDO49_RS11990;Name=LDO49_RS11990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11990;old_locus_tag=BCEP4_1650040 NZ_CAJZAV010000074.1 Protein Homology CDS 32426 34039 . + 0 ID=cds-WP_048020649.1;Parent=gene-LDO49_RS11990;Dbxref=GenBank:WP_048020649.1;Name=WP_048020649.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495212.1;locus_tag=LDO49_RS11990;product=sugar ABC transporter ATP-binding protein;protein_id=WP_048020649.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 34036 35055 . + . ID=gene-LDO49_RS11995;Name=LDO49_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS11995;old_locus_tag=BCEP4_1650041 NZ_CAJZAV010000074.1 Protein Homology CDS 34036 35055 . + 0 ID=cds-WP_027787475.1;Parent=gene-LDO49_RS11995;Dbxref=GenBank:WP_027787475.1;Name=WP_027787475.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759467.1;locus_tag=LDO49_RS11995;product=ABC transporter permease;protein_id=WP_027787475.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq gene 35091 36122 . + . ID=gene-LDO49_RS12000;Name=LDO49_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12000;old_locus_tag=BCEP4_1650042 NZ_CAJZAV010000074.1 Protein Homology CDS 35091 36122 . + 0 ID=cds-WP_027787474.1;Parent=gene-LDO49_RS12000;Dbxref=GenBank:WP_027787474.1;Name=WP_027787474.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759468.1;locus_tag=LDO49_RS12000;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_027787474.1;transl_table=11 NZ_CAJZAV010000074.1 RefSeq pseudogene 36119 36335 . + . ID=gene-LDO49_RS12005;Name=LDO49_RS12005;end_range=36335,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS12005;partial=true;pseudo=true NZ_CAJZAV010000074.1 Protein Homology CDS 36119 36335 . + 0 ID=cds-LDO49_RS12005;Parent=gene-LDO49_RS12005;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=36335,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656660.1;locus_tag=LDO49_RS12005;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000075.1 1 492 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000075.1 RefSeq region 1 492 . + . ID=NZ_CAJZAV010000075.1:1..492;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_166 NZ_CAJZAV010000075.1 RefSeq gene 1 221 . + . ID=gene-LDO49_RS37965;Name=LDO49_RS37965;end_range=221,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37965;old_locus_tag=BCEP4_1660001;partial=true;start_range=.,1 NZ_CAJZAV010000075.1 Protein Homology CDS 1 221 . + 0 ID=cds-WP_146107394.1;Parent=gene-LDO49_RS37965;Dbxref=GenBank:WP_146107394.1;Name=WP_146107394.1;Ontology_term=GO:0005524;end_range=221,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012078147.1;locus_tag=LDO49_RS37965;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_146107394.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000075.1 RefSeq pseudogene 232 492 . + . ID=gene-LDO49_RS37970;Name=LDO49_RS37970;end_range=492,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37970;partial=true;pseudo=true;start_range=.,232 NZ_CAJZAV010000075.1 Protein Homology CDS 232 492 . + 0 ID=cds-LDO49_RS37970;Parent=gene-LDO49_RS37970;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=492,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=LDO49_RS37970;partial=true;product=amino acid ABC transporter ATP-binding protein;pseudo=true;start_range=.,232;transl_table=11 ##sequence-region NZ_CAJZAV010000076.1 1 3897 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000076.1 RefSeq region 1 3897 . + . ID=NZ_CAJZAV010000076.1:1..3897;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_167 NZ_CAJZAV010000076.1 RefSeq pseudogene 1 242 . - . ID=gene-LDO49_RS12015;Name=LDO49_RS12015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS12015;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000076.1 Protein Homology CDS 1 242 . - 0 ID=cds-LDO49_RS12015;Parent=gene-LDO49_RS12015;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354284.1;locus_tag=LDO49_RS12015;partial=true;product=ABC transporter ATP-binding protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000076.1 RefSeq gene 292 1942 . - . ID=gene-LDO49_RS12020;Name=LDO49_RS12020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12020;old_locus_tag=BCEP4_1670002;partial=true;start_range=.,292 NZ_CAJZAV010000076.1 Protein Homology CDS 292 1942 . - 0 ID=cds-WP_443797943.1;Parent=gene-LDO49_RS12020;Dbxref=GenBank:WP_443797943.1;Name=WP_443797943.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523176.1;locus_tag=LDO49_RS12020;partial=true;product=ABC transporter ATP-binding protein;protein_id=WP_443797943.1;start_range=.,292;transl_table=11 NZ_CAJZAV010000076.1 RefSeq gene 1939 2991 . - . ID=gene-LDO49_RS12025;Name=LDO49_RS12025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12025;old_locus_tag=BCEP4_1670003 NZ_CAJZAV010000076.1 Protein Homology CDS 1939 2991 . - 0 ID=cds-WP_060071987.1;Parent=gene-LDO49_RS12025;Dbxref=GenBank:WP_060071987.1;Name=WP_060071987.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009900928.1;locus_tag=LDO49_RS12025;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_060071987.1;transl_table=11 NZ_CAJZAV010000076.1 RefSeq gene 2988 3897 . - . ID=gene-LDO49_RS12030;Name=LDO49_RS12030;end_range=3897,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12030;old_locus_tag=BCEP4_1670004;partial=true NZ_CAJZAV010000076.1 Protein Homology CDS 2988 3897 . - 1 ID=cds-WP_253074675.1;Parent=gene-LDO49_RS12030;Dbxref=GenBank:WP_253074675.1;Name=WP_253074675.1;Ontology_term=GO:0009058;end_range=3897,.;gbkey=CDS;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339599.1;locus_tag=LDO49_RS12030;partial=true;product=thioesterase domain-containing protein;protein_id=WP_253074675.1;transl_table=11 ##sequence-region NZ_CAJZAV010000077.1 1 10190 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000077.1 RefSeq region 1 10190 . + . ID=NZ_CAJZAV010000077.1:1..10190;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_168 NZ_CAJZAV010000077.1 RefSeq gene 211 1198 . - . ID=gene-LDO49_RS12035;Name=LDO49_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12035;partial=true;start_range=.,211 NZ_CAJZAV010000077.1 Protein Homology CDS 211 1198 . - 0 ID=cds-WP_443797944.1;Parent=gene-LDO49_RS12035;Dbxref=GenBank:WP_443797944.1;Name=WP_443797944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897906.1;locus_tag=LDO49_RS12035;partial=true;product=hypothetical protein;protein_id=WP_443797944.1;start_range=.,211;transl_table=11 NZ_CAJZAV010000077.1 RefSeq gene 1264 2730 . - . ID=gene-LDO49_RS12040;Name=LDO49_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12040;old_locus_tag=BCEP4_1680004 NZ_CAJZAV010000077.1 Protein Homology CDS 1264 2730 . - 0 ID=cds-WP_060073370.1;Parent=gene-LDO49_RS12040;Dbxref=GenBank:WP_060073370.1;Name=WP_060073370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351135.1;locus_tag=LDO49_RS12040;product=carbohydrate porin;protein_id=WP_060073370.1;transl_table=11 NZ_CAJZAV010000077.1 RefSeq gene 3806 5368 . + . ID=gene-LDO49_RS12045;Name=LDO49_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12045;old_locus_tag=BCEP4_1680005 NZ_CAJZAV010000077.1 Protein Homology CDS 3806 5368 . + 0 ID=cds-WP_224051790.1;Parent=gene-LDO49_RS12045;Dbxref=GenBank:WP_224051790.1;Name=WP_224051790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008354287.1;locus_tag=LDO49_RS12045;product=tetratricopeptide repeat protein;protein_id=WP_224051790.1;transl_table=11 NZ_CAJZAV010000077.1 RefSeq gene 5906 6043 . + . ID=gene-LDO49_RS12050;Name=LDO49_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12050 NZ_CAJZAV010000077.1 GeneMarkS-2+ CDS 5906 6043 . + 0 ID=cds-WP_224051791.1;Parent=gene-LDO49_RS12050;Dbxref=GenBank:WP_224051791.1;Name=WP_224051791.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS12050;product=hypothetical protein;protein_id=WP_224051791.1;transl_table=11 NZ_CAJZAV010000077.1 RefSeq gene 6288 6458 . + . ID=gene-LDO49_RS12055;Name=LDO49_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12055 NZ_CAJZAV010000077.1 GeneMarkS-2+ CDS 6288 6458 . + 0 ID=cds-WP_155627521.1;Parent=gene-LDO49_RS12055;Dbxref=GenBank:WP_155627521.1;Name=WP_155627521.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS12055;product=hypothetical protein;protein_id=WP_155627521.1;transl_table=11 NZ_CAJZAV010000077.1 RefSeq gene 6548 7477 . - . ID=gene-LDO49_RS12060;Name=LDO49_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12060;old_locus_tag=BCEP4_1680009 NZ_CAJZAV010000077.1 Protein Homology CDS 6548 7477 . - 0 ID=cds-WP_224051792.1;Parent=gene-LDO49_RS12060;Dbxref=GenBank:WP_224051792.1;Name=WP_224051792.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012301.6;locus_tag=LDO49_RS12060;product=response regulator transcription factor;protein_id=WP_224051792.1;transl_table=11 NZ_CAJZAV010000077.1 RefSeq gene 7736 8044 . + . ID=gene-LDO49_RS12065;Name=LDO49_RS12065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12065;old_locus_tag=BCEP4_1680011 NZ_CAJZAV010000077.1 Protein Homology CDS 7736 8044 . + 0 ID=cds-WP_167562607.1;Parent=gene-LDO49_RS12065;Dbxref=GenBank:WP_167562607.1;Name=WP_167562607.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009967440.1;locus_tag=LDO49_RS12065;product=H-NS histone family protein;protein_id=WP_167562607.1;transl_table=11 NZ_CAJZAV010000077.1 RefSeq gene 9027 10190 . + . ID=gene-LDO49_RS37295;Name=LDO49_RS37295;end_range=10190,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37295;partial=true NZ_CAJZAV010000077.1 Protein Homology CDS 9027 10190 . + 0 ID=cds-WP_290369829.1;Parent=gene-LDO49_RS37295;Dbxref=GenBank:WP_290369829.1;Name=WP_290369829.1;end_range=10190,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024418.6;locus_tag=LDO49_RS37295;partial=true;product=ESPR domain-containing protein;protein_id=WP_290369829.1;transl_table=11 ##sequence-region NZ_CAJZAV010000078.1 1 23954 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000078.1 RefSeq region 1 23954 . + . ID=NZ_CAJZAV010000078.1:1..23954;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_169 NZ_CAJZAV010000078.1 RefSeq gene 1 987 . + . ID=gene-LDO49_RS12080;Name=LDO49_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12080;old_locus_tag=BCEP4_1690001;partial=true;start_range=.,1 NZ_CAJZAV010000078.1 Protein Homology CDS 1 987 . + 0 ID=cds-WP_224051793.1;Parent=gene-LDO49_RS12080;Dbxref=GenBank:WP_224051793.1;Name=WP_224051793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658669.1;locus_tag=LDO49_RS12080;partial=true;product=SDR family oxidoreductase;protein_id=WP_224051793.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 1042 1482 . - . ID=gene-LDO49_RS12085;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=LDO49_RS12085;old_locus_tag=BCEP4_1690002 NZ_CAJZAV010000078.1 Protein Homology CDS 1042 1482 . - 0 ID=cds-WP_021164054.1;Parent=gene-LDO49_RS12085;Dbxref=GenBank:WP_021164054.1;Name=WP_021164054.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355386.1;locus_tag=LDO49_RS12085;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_021164054.1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 1635 2324 . + . ID=gene-LDO49_RS12090;Name=LDO49_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12090;old_locus_tag=BCEP4_1690004 NZ_CAJZAV010000078.1 Protein Homology CDS 1635 2324 . + 0 ID=cds-WP_060055929.1;Parent=gene-LDO49_RS12090;Dbxref=GenBank:WP_060055929.1;Name=WP_060055929.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415060.1;locus_tag=LDO49_RS12090;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_060055929.1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 2321 3085 . + . ID=gene-LDO49_RS12095;Name=LDO49_RS12095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12095;old_locus_tag=BCEP4_1690003 NZ_CAJZAV010000078.1 Protein Homology CDS 2321 3085 . + 0 ID=cds-WP_059591296.1;Parent=gene-LDO49_RS12095;Dbxref=GenBank:WP_059591296.1;Name=WP_059591296.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765813.1;locus_tag=LDO49_RS12095;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_059591296.1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 3108 4571 . + . ID=gene-LDO49_RS12100;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=LDO49_RS12100;old_locus_tag=BCEP4_1690005 NZ_CAJZAV010000078.1 Protein Homology CDS 3108 4571 . + 0 ID=cds-WP_059485026.1;Parent=gene-LDO49_RS12100;Dbxref=GenBank:WP_059485026.1;Name=WP_059485026.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009900809.1;locus_tag=LDO49_RS12100;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_059485026.1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 4621 5469 . + . ID=gene-LDO49_RS12105;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=LDO49_RS12105;old_locus_tag=BCEP4_1690006 NZ_CAJZAV010000078.1 Protein Homology CDS 4621 5469 . + 0 ID=cds-WP_060071684.1;Parent=gene-LDO49_RS12105;Dbxref=GenBank:WP_060071684.1;Name=WP_060071684.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329640.1;locus_tag=LDO49_RS12105;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_060071684.1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 5503 5895 . + . ID=gene-LDO49_RS12110;Name=LDO49_RS12110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12110;old_locus_tag=BCEP4_1690007 NZ_CAJZAV010000078.1 Protein Homology CDS 5503 5895 . + 0 ID=cds-WP_027791434.1;Parent=gene-LDO49_RS12110;Dbxref=GenBank:WP_027791434.1;Name=WP_027791434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479169.1;locus_tag=LDO49_RS12110;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_027791434.1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 5916 6719 . + . ID=gene-LDO49_RS12115;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=LDO49_RS12115;old_locus_tag=BCEP4_1690008 NZ_CAJZAV010000078.1 Protein Homology CDS 5916 6719 . + 0 ID=cds-WP_021164056.1;Parent=gene-LDO49_RS12115;Dbxref=GenBank:WP_021164056.1;Name=WP_021164056.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532788.1;locus_tag=LDO49_RS12115;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_021164056.1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 6732 7538 . + . ID=gene-LDO49_RS12120;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=LDO49_RS12120;old_locus_tag=BCEP4_1690009 NZ_CAJZAV010000078.1 Protein Homology CDS 6732 7538 . + 0 ID=cds-WP_224051794.1;Parent=gene-LDO49_RS12120;Dbxref=GenBank:WP_224051794.1;Name=WP_224051794.1;Ontology_term=GO:0010124;gbkey=CDS;gene=hpaI;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494968.1;locus_tag=LDO49_RS12120;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_224051794.1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 7751 8950 . + . ID=gene-LDO49_RS12125;Name=LDO49_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12125;old_locus_tag=BCEP4_1690010 NZ_CAJZAV010000078.1 Protein Homology CDS 7751 8950 . + 0 ID=cds-WP_224051795.1;Parent=gene-LDO49_RS12125;Dbxref=GenBank:WP_224051795.1;Name=WP_224051795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011490772.1;locus_tag=LDO49_RS12125;product=SEL1-like repeat protein;protein_id=WP_224051795.1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 8941 9105 . + . ID=gene-LDO49_RS12130;Name=LDO49_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12130 NZ_CAJZAV010000078.1 GeneMarkS-2+ CDS 8941 9105 . + 0 ID=cds-WP_155630249.1;Parent=gene-LDO49_RS12130;Dbxref=GenBank:WP_155630249.1;Name=WP_155630249.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS12130;product=hypothetical protein;protein_id=WP_155630249.1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 9187 9978 . - . ID=gene-LDO49_RS12135;Name=LDO49_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12135;old_locus_tag=BCEP4_1690011 NZ_CAJZAV010000078.1 Protein Homology CDS 9187 9978 . - 0 ID=cds-WP_059552339.1;Parent=gene-LDO49_RS12135;Dbxref=GenBank:WP_059552339.1;Name=WP_059552339.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490701.1;locus_tag=LDO49_RS12135;product=AraC family transcriptional regulator;protein_id=WP_059552339.1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 10074 10325 . + . ID=gene-LDO49_RS12140;Name=LDO49_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12140;old_locus_tag=BCEP4_1690012 NZ_CAJZAV010000078.1 Protein Homology CDS 10074 10325 . + 0 ID=cds-WP_048021897.1;Parent=gene-LDO49_RS12140;Dbxref=GenBank:WP_048021897.1;Name=WP_048021897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490702.1;locus_tag=LDO49_RS12140;product=hypothetical protein;protein_id=WP_048021897.1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 10372 11337 . + . ID=gene-LDO49_RS12145;Name=LDO49_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12145;old_locus_tag=BCEP4_1690013 NZ_CAJZAV010000078.1 Protein Homology CDS 10372 11337 . + 0 ID=cds-WP_224051797.1;Parent=gene-LDO49_RS12145;Dbxref=GenBank:WP_224051797.1;Name=WP_224051797.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554,GO:0048038;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338281.1;locus_tag=LDO49_RS12145;product=quinone oxidoreductase family protein;protein_id=WP_224051797.1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 11508 12599 . - . ID=gene-LDO49_RS12150;Name=LDO49_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12150;old_locus_tag=BCEP4_1690014 NZ_CAJZAV010000078.1 Protein Homology CDS 11508 12599 . - 0 ID=cds-WP_048021900.1;Parent=gene-LDO49_RS12150;Dbxref=GenBank:WP_048021900.1;Name=WP_048021900.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490700.1;locus_tag=LDO49_RS12150;product=porin;protein_id=WP_048021900.1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 12763 13830 . - . ID=gene-LDO49_RS12155;Name=LDO49_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12155;old_locus_tag=BCEP4_1690015 NZ_CAJZAV010000078.1 Protein Homology CDS 12763 13830 . - 0 ID=cds-WP_059552334.1;Parent=gene-LDO49_RS12155;Dbxref=GenBank:WP_059552334.1;Name=WP_059552334.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724979.1;locus_tag=LDO49_RS12155;product=ABC transporter ATP-binding protein;protein_id=WP_059552334.1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 13823 15595 . - . ID=gene-LDO49_RS12160;Name=LDO49_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12160;old_locus_tag=BCEP4_1690016 NZ_CAJZAV010000078.1 Protein Homology CDS 13823 15595 . - 0 ID=cds-WP_059485020.1;Parent=gene-LDO49_RS12160;Dbxref=GenBank:WP_059485020.1;Name=WP_059485020.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899532.1;locus_tag=LDO49_RS12160;product=ABC transporter permease;protein_id=WP_059485020.1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 15718 16818 . - . ID=gene-LDO49_RS12165;Name=LDO49_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12165;old_locus_tag=BCEP4_1690017 NZ_CAJZAV010000078.1 Protein Homology CDS 15718 16818 . - 0 ID=cds-WP_060125538.1;Parent=gene-LDO49_RS12165;Dbxref=GenBank:WP_060125538.1;Name=WP_060125538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758975.1;locus_tag=LDO49_RS12165;product=ABC transporter substrate-binding protein;protein_id=WP_060125538.1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 17037 18524 . - . ID=gene-LDO49_RS12170;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=LDO49_RS12170;old_locus_tag=BCEP4_1690018 NZ_CAJZAV010000078.1 Protein Homology CDS 17037 18524 . - 0 ID=cds-WP_224051799.1;Parent=gene-LDO49_RS12170;Dbxref=GenBank:WP_224051799.1;Name=WP_224051799.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355368.1;locus_tag=LDO49_RS12170;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_224051799.1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 18627 19865 . + . ID=gene-LDO49_RS12175;Name=LDO49_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12175;old_locus_tag=BCEP4_1690019 NZ_CAJZAV010000078.1 Protein Homology CDS 18627 19865 . + 0 ID=cds-WP_224051801.1;Parent=gene-LDO49_RS12175;Dbxref=GenBank:WP_224051801.1;Name=WP_224051801.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493302.1;locus_tag=LDO49_RS12175;product=multidrug effflux MFS transporter;protein_id=WP_224051801.1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 20004 20684 . + . ID=gene-LDO49_RS12180;Name=LDO49_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12180;old_locus_tag=BCEP4_1690020 NZ_CAJZAV010000078.1 Protein Homology CDS 20004 20684 . + 0 ID=cds-WP_021164068.1;Parent=gene-LDO49_RS12180;Dbxref=GenBank:WP_021164068.1;Name=WP_021164068.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484260.1;locus_tag=LDO49_RS12180;product=response regulator;protein_id=WP_021164068.1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 20764 22182 . + . ID=gene-LDO49_RS12185;Name=LDO49_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12185;old_locus_tag=BCEP4_1690021 NZ_CAJZAV010000078.1 Protein Homology CDS 20764 22182 . + 0 ID=cds-WP_224051802.1;Parent=gene-LDO49_RS12185;Dbxref=GenBank:WP_224051802.1;Name=WP_224051802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547828.1;locus_tag=LDO49_RS12185;product=sensor histidine kinase;protein_id=WP_224051802.1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 22318 23184 . - . ID=gene-LDO49_RS12190;Name=LDO49_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12190;old_locus_tag=BCEP4_1690022 NZ_CAJZAV010000078.1 Protein Homology CDS 22318 23184 . - 0 ID=cds-WP_059861385.1;Parent=gene-LDO49_RS12190;Dbxref=GenBank:WP_059861385.1;Name=WP_059861385.1;Ontology_term=GO:0016661,GO:0030151,GO:0030170,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338272.1;locus_tag=LDO49_RS12190;product=MOSC domain-containing protein;protein_id=WP_059861385.1;transl_table=11 NZ_CAJZAV010000078.1 RefSeq gene 23273 23954 . - . ID=gene-LDO49_RS12195;Name=LDO49_RS12195;end_range=23954,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12195;old_locus_tag=BCEP4_1690023;partial=true NZ_CAJZAV010000078.1 Protein Homology CDS 23273 23954 . - 1 ID=cds-WP_224051803.1;Parent=gene-LDO49_RS12195;Dbxref=GenBank:WP_224051803.1;Name=WP_224051803.1;end_range=23954,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217070.1;locus_tag=LDO49_RS12195;partial=true;product=ABC transporter substrate-binding protein;protein_id=WP_224051803.1;transl_table=11 ##sequence-region NZ_CAJZAV010000079.1 1 55886 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000079.1 RefSeq region 1 55886 . + . ID=NZ_CAJZAV010000079.1:1..55886;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_17 NZ_CAJZAV010000079.1 RefSeq gene 90 1493 . - . ID=gene-LDO49_RS12200;Name=LDO49_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12200;old_locus_tag=BCEP4_170001 NZ_CAJZAV010000079.1 Protein Homology CDS 90 1493 . - 0 ID=cds-WP_060341456.1;Parent=gene-LDO49_RS12200;Dbxref=GenBank:WP_060341456.1;Name=WP_060341456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415440.1;locus_tag=LDO49_RS12200;product=MBL fold metallo-hydrolase RNA specificity domain-containing protein;protein_id=WP_060341456.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 1792 2238 . + . ID=gene-LDO49_RS12205;Name=LDO49_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12205;old_locus_tag=BCEP4_170002 NZ_CAJZAV010000079.1 Protein Homology CDS 1792 2238 . + 0 ID=cds-WP_021163484.1;Parent=gene-LDO49_RS12205;Dbxref=GenBank:WP_021163484.1;Name=WP_021163484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415447.1;locus_tag=LDO49_RS12205;product=hypothetical protein;protein_id=WP_021163484.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 2273 3748 . - . ID=gene-LDO49_RS12210;Name=LDO49_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12210;old_locus_tag=BCEP4_170003 NZ_CAJZAV010000079.1 Protein Homology CDS 2273 3748 . - 0 ID=cds-WP_124475289.1;Parent=gene-LDO49_RS12210;Dbxref=GenBank:WP_124475289.1;Name=WP_124475289.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218241.1;locus_tag=LDO49_RS12210;product=efflux transporter outer membrane subunit;protein_id=WP_124475289.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 3726 4811 . - . ID=gene-LDO49_RS12215;Name=LDO49_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12215;old_locus_tag=BCEP4_170004 NZ_CAJZAV010000079.1 Protein Homology CDS 3726 4811 . - 0 ID=cds-WP_224051804.1;Parent=gene-LDO49_RS12215;Dbxref=GenBank:WP_224051804.1;Name=WP_224051804.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415444.1;locus_tag=LDO49_RS12215;product=HlyD family secretion protein;protein_id=WP_224051804.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 4808 5512 . - . ID=gene-LDO49_RS12220;Name=LDO49_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12220;old_locus_tag=BCEP4_170005 NZ_CAJZAV010000079.1 Protein Homology CDS 4808 5512 . - 0 ID=cds-WP_175851021.1;Parent=gene-LDO49_RS12220;Dbxref=GenBank:WP_175851021.1;Name=WP_175851021.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415426.1;locus_tag=LDO49_RS12220;product=ABC transporter ATP-binding protein;protein_id=WP_175851021.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 5509 6645 . - . ID=gene-LDO49_RS12225;Name=LDO49_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12225;old_locus_tag=BCEP4_170006 NZ_CAJZAV010000079.1 Protein Homology CDS 5509 6645 . - 0 ID=cds-WP_021163488.1;Parent=gene-LDO49_RS12225;Dbxref=GenBank:WP_021163488.1;Name=WP_021163488.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853754.1;locus_tag=LDO49_RS12225;product=ABC transporter permease;protein_id=WP_021163488.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 6674 6997 . - . ID=gene-LDO49_RS37500;Name=LDO49_RS37500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37500 NZ_CAJZAV010000079.1 Protein Homology CDS 6674 6997 . - 0 ID=cds-WP_372585837.1;Parent=gene-LDO49_RS37500;Dbxref=GenBank:WP_372585837.1;Name=WP_372585837.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022625.6;locus_tag=LDO49_RS37500;product=DUF2964 family protein;protein_id=WP_372585837.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 7046 8170 . - . ID=gene-LDO49_RS12235;Name=LDO49_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12235;old_locus_tag=BCEP4_170008 NZ_CAJZAV010000079.1 Protein Homology CDS 7046 8170 . - 0 ID=cds-WP_059621620.1;Parent=gene-LDO49_RS12235;Dbxref=GenBank:WP_059621620.1;Name=WP_059621620.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007176440.1;locus_tag=LDO49_RS12235;product=ABC transporter permease;protein_id=WP_059621620.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 8173 10980 . - . ID=gene-LDO49_RS12240;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=LDO49_RS12240;old_locus_tag=BCEP4_170009 NZ_CAJZAV010000079.1 Protein Homology CDS 8173 10980 . - 0 ID=cds-WP_060148400.1;Parent=gene-LDO49_RS12240;Dbxref=GenBank:WP_060148400.1;Name=WP_060148400.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488291.1;locus_tag=LDO49_RS12240;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_060148400.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 10977 12050 . - . ID=gene-LDO49_RS12245;Name=LDO49_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12245;old_locus_tag=BCEP4_170010 NZ_CAJZAV010000079.1 Protein Homology CDS 10977 12050 . - 0 ID=cds-WP_060148318.1;Parent=gene-LDO49_RS12245;Dbxref=GenBank:WP_060148318.1;Name=WP_060148318.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880374.1;locus_tag=LDO49_RS12245;product=HlyD family secretion protein;protein_id=WP_060148318.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 12047 13543 . - . ID=gene-LDO49_RS12250;Name=LDO49_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12250;old_locus_tag=BCEP4_170011 NZ_CAJZAV010000079.1 Protein Homology CDS 12047 13543 . - 0 ID=cds-WP_060148320.1;Parent=gene-LDO49_RS12250;Dbxref=GenBank:WP_060148320.1;Name=WP_060148320.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218235.1;locus_tag=LDO49_RS12250;product=efflux transporter outer membrane subunit;protein_id=WP_060148320.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 13752 13940 . - . ID=gene-LDO49_RS12255;Name=LDO49_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12255;old_locus_tag=BCEP4_170013 NZ_CAJZAV010000079.1 Protein Homology CDS 13752 13940 . - 0 ID=cds-WP_042977964.1;Parent=gene-LDO49_RS12255;Dbxref=GenBank:WP_042977964.1;Name=WP_042977964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488308.1;locus_tag=LDO49_RS12255;product=DUF2964 family protein;protein_id=WP_042977964.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 14222 14869 . + . ID=gene-LDO49_RS12260;Name=LDO49_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12260;old_locus_tag=BCEP4_170014 NZ_CAJZAV010000079.1 Protein Homology CDS 14222 14869 . + 0 ID=cds-WP_021163495.1;Parent=gene-LDO49_RS12260;Dbxref=GenBank:WP_021163495.1;Name=WP_021163495.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010120526.1;locus_tag=LDO49_RS12260;product=BON domain-containing protein;protein_id=WP_021163495.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 14908 15417 . + . ID=gene-LDO49_RS12265;Name=LDO49_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12265;old_locus_tag=BCEP4_170015 NZ_CAJZAV010000079.1 Protein Homology CDS 14908 15417 . + 0 ID=cds-WP_059484443.1;Parent=gene-LDO49_RS12265;Dbxref=GenBank:WP_059484443.1;Name=WP_059484443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218232.1;locus_tag=LDO49_RS12265;product=BCAM0308 family protein;protein_id=WP_059484443.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq pseudogene 15451 17421 . + . ID=gene-LDO49_RS12270;Name=ftsH;end_range=17421,.;gbkey=Gene;gene=ftsH;gene_biotype=pseudogene;locus_tag=LDO49_RS12270;old_locus_tag=BCEP4_170016;partial=true;pseudo=true NZ_CAJZAV010000079.1 Protein Homology CDS 15451 17421 . + 0 ID=cds-LDO49_RS12270;Parent=gene-LDO49_RS12270;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;end_range=17421,.;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004547620.1;locus_tag=LDO49_RS12270;partial=true;product=ATP-dependent zinc metalloprotease FtsH;pseudo=true;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 17389 19182 . - . ID=gene-LDO49_RS12275;Name=LDO49_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12275;old_locus_tag=BCEP4_170017 NZ_CAJZAV010000079.1 Protein Homology CDS 17389 19182 . - 0 ID=cds-WP_059676149.1;Parent=gene-LDO49_RS12275;Dbxref=GenBank:WP_059676149.1;Name=WP_059676149.1;Ontology_term=GO:0000166,GO:0004748,GO:0031419;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488453.1;locus_tag=LDO49_RS12275;product=adenosylcobalamin-dependent ribonucleoside-diphosphate reductase;protein_id=WP_059676149.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 19413 20375 . + . ID=gene-LDO49_RS12280;Name=LDO49_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12280;old_locus_tag=BCEP4_170018 NZ_CAJZAV010000079.1 Protein Homology CDS 19413 20375 . + 0 ID=cds-WP_059491913.1;Parent=gene-LDO49_RS12280;Dbxref=GenBank:WP_059491913.1;Name=WP_059491913.1;Ontology_term=GO:0016310,GO:0005524,GO:0008443;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphofructokinase activity|0008443||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488382.1;locus_tag=LDO49_RS12280;product=1-phosphofructokinase family hexose kinase;protein_id=WP_059491913.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 20372 21163 . + . ID=gene-LDO49_RS12285;Name=LDO49_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12285;old_locus_tag=BCEP4_170019 NZ_CAJZAV010000079.1 Protein Homology CDS 20372 21163 . + 0 ID=cds-WP_060148323.1;Parent=gene-LDO49_RS12285;Dbxref=GenBank:WP_060148323.1;Name=WP_060148323.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488471.1;locus_tag=LDO49_RS12285;product=polysaccharide deacetylase family protein;protein_id=WP_060148323.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 21342 21530 . + . ID=gene-LDO49_RS12290;Name=LDO49_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12290;old_locus_tag=BCEP4_170020 NZ_CAJZAV010000079.1 Protein Homology CDS 21342 21530 . + 0 ID=cds-WP_021163500.1;Parent=gene-LDO49_RS12290;Dbxref=GenBank:WP_021163500.1;Name=WP_021163500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011297393.1;locus_tag=LDO49_RS12290;product=hypothetical protein;protein_id=WP_021163500.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 21563 22063 . - . ID=gene-LDO49_RS12295;Name=LDO49_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12295;old_locus_tag=BCEP4_170021 NZ_CAJZAV010000079.1 Protein Homology CDS 21563 22063 . - 0 ID=cds-WP_059709030.1;Parent=gene-LDO49_RS12295;Dbxref=GenBank:WP_059709030.1;Name=WP_059709030.1;Ontology_term=GO:0042572,GO:0016746,GO:0047173;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA,phosphatidylcholine-retinol O-acyltransferase activity|0047173||IEA;go_process=retinol metabolic process|0042572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012427412.1;locus_tag=LDO49_RS12295;product=lecithin retinol acyltransferase family protein;protein_id=WP_059709030.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 22522 22989 . + . ID=gene-LDO49_RS12300;Name=LDO49_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12300 NZ_CAJZAV010000079.1 Protein Homology CDS 22522 22989 . + 0 ID=cds-WP_059491922.1;Parent=gene-LDO49_RS12300;Dbxref=GenBank:WP_059491922.1;Name=WP_059491922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493315.1;locus_tag=LDO49_RS12300;product=hypothetical protein;protein_id=WP_059491922.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 23200 24420 . + . ID=gene-LDO49_RS12305;Name=LDO49_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12305;old_locus_tag=BCEP4_170023 NZ_CAJZAV010000079.1 Protein Homology CDS 23200 24420 . + 0 ID=cds-WP_224051817.1;Parent=gene-LDO49_RS12305;Dbxref=GenBank:WP_224051817.1;Name=WP_224051817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698064.1;locus_tag=LDO49_RS12305;product=putative glycoside hydrolase;protein_id=WP_224051817.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 24366 26969 . + . ID=gene-LDO49_RS12310;Name=LDO49_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12310;old_locus_tag=BCEP4_170024 NZ_CAJZAV010000079.1 Protein Homology CDS 24366 26969 . + 0 ID=cds-WP_224051805.1;Parent=gene-LDO49_RS12310;Dbxref=GenBank:WP_224051805.1;Name=WP_224051805.1;Ontology_term=GO:0033922;gbkey=CDS;go_function=peptidoglycan beta-N-acetylmuramidase activity|0033922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020204350.1;locus_tag=LDO49_RS12310;product=exo-beta-N-acetylmuramidase NamZ domain-containing protein;protein_id=WP_224051805.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 27219 28382 . + . ID=gene-LDO49_RS12315;Name=LDO49_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12315;old_locus_tag=BCEP4_170026 NZ_CAJZAV010000079.1 Protein Homology CDS 27219 28382 . + 0 ID=cds-WP_224051806.1;Parent=gene-LDO49_RS12315;Dbxref=GenBank:WP_224051806.1;Name=WP_224051806.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349428.1;locus_tag=LDO49_RS12315;product=TIGR03364 family FAD-dependent oxidoreductase;protein_id=WP_224051806.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 28470 29678 . - . ID=gene-LDO49_RS12320;Name=LDO49_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12320;old_locus_tag=BCEP4_170027 NZ_CAJZAV010000079.1 Protein Homology CDS 28470 29678 . - 0 ID=cds-WP_060129991.1;Parent=gene-LDO49_RS12320;Dbxref=GenBank:WP_060129991.1;Name=WP_060129991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349460.1;locus_tag=LDO49_RS12320;product=zinc ribbon domain-containing protein;protein_id=WP_060129991.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 29708 30391 . - . ID=gene-LDO49_RS12325;Name=LDO49_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12325;old_locus_tag=BCEP4_170028 NZ_CAJZAV010000079.1 Protein Homology CDS 29708 30391 . - 0 ID=cds-WP_224051807.1;Parent=gene-LDO49_RS12325;Dbxref=GenBank:WP_224051807.1;Name=WP_224051807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349461.1;locus_tag=LDO49_RS12325;product=hypothetical protein;protein_id=WP_224051807.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 30421 31521 . + . ID=gene-LDO49_RS12330;Name=LDO49_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12330;old_locus_tag=BCEP4_170029 NZ_CAJZAV010000079.1 GeneMarkS-2+ CDS 30421 31521 . + 0 ID=cds-WP_224051818.1;Parent=gene-LDO49_RS12330;Dbxref=GenBank:WP_224051818.1;Name=WP_224051818.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS12330;product=hypothetical protein;protein_id=WP_224051818.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq pseudogene 31638 31790 . - . ID=gene-LDO49_RS37505;Name=LDO49_RS37505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37505;partial=true;pseudo=true;start_range=.,31638 NZ_CAJZAV010000079.1 Protein Homology CDS 31638 31790 . - 0 ID=cds-LDO49_RS37505;Parent=gene-LDO49_RS37505;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024183.6;locus_tag=LDO49_RS37505;partial=true;product=double zinc ribbon domain-containing protein;pseudo=true;start_range=.,31638;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 32305 32433 . - . ID=gene-LDO49_RS37300;Name=LDO49_RS37300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37300;old_locus_tag=BCEP4_170031 NZ_CAJZAV010000079.1 GeneMarkS-2+ CDS 32305 32433 . - 0 ID=cds-WP_021162513.1;Parent=gene-LDO49_RS37300;Dbxref=GenBank:WP_021162513.1;Name=WP_021162513.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37300;product=hypothetical protein;protein_id=WP_021162513.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 32658 33632 . + . ID=gene-LDO49_RS12340;Name=LDO49_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12340;old_locus_tag=BCEP4_170032 NZ_CAJZAV010000079.1 Protein Homology CDS 32658 33632 . + 0 ID=cds-WP_308043860.1;Parent=gene-LDO49_RS12340;Dbxref=GenBank:WP_308043860.1;Name=WP_308043860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017328826.1;locus_tag=LDO49_RS12340;product=hypothetical protein;protein_id=WP_308043860.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 33796 34905 . + . ID=gene-LDO49_RS12345;Name=LDO49_RS12345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12345;old_locus_tag=BCEP4_170033 NZ_CAJZAV010000079.1 Protein Homology CDS 33796 34905 . + 0 ID=cds-WP_224051808.1;Parent=gene-LDO49_RS12345;Dbxref=GenBank:WP_224051808.1;Name=WP_224051808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011798284.1;locus_tag=LDO49_RS12345;product=DNA alkylation repair protein;protein_id=WP_224051808.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 35248 36015 . - . ID=gene-LDO49_RS12350;Name=LDO49_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12350;old_locus_tag=BCEP4_170034 NZ_CAJZAV010000079.1 GeneMarkS-2+ CDS 35248 36015 . - 0 ID=cds-WP_224051809.1;Parent=gene-LDO49_RS12350;Dbxref=GenBank:WP_224051809.1;Name=WP_224051809.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS12350;product=hypothetical protein;protein_id=WP_224051809.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 36072 36938 . - . ID=gene-LDO49_RS12355;Name=LDO49_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12355;old_locus_tag=BCEP4_170035 NZ_CAJZAV010000079.1 GeneMarkS-2+ CDS 36072 36938 . - 0 ID=cds-WP_224051810.1;Parent=gene-LDO49_RS12355;Dbxref=GenBank:WP_224051810.1;Name=WP_224051810.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS12355;product=hypothetical protein;protein_id=WP_224051810.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 37273 37605 . + . ID=gene-LDO49_RS12360;Name=LDO49_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12360;old_locus_tag=BCEP4_170037 NZ_CAJZAV010000079.1 GeneMarkS-2+ CDS 37273 37605 . + 0 ID=cds-WP_224051811.1;Parent=gene-LDO49_RS12360;Dbxref=GenBank:WP_224051811.1;Name=WP_224051811.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS12360;product=hypothetical protein;protein_id=WP_224051811.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 37764 38597 . + . ID=gene-LDO49_RS12365;Name=LDO49_RS12365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12365;old_locus_tag=BCEP4_170038 NZ_CAJZAV010000079.1 Protein Homology CDS 37764 38597 . + 0 ID=cds-WP_224051812.1;Parent=gene-LDO49_RS12365;Dbxref=GenBank:WP_224051812.1;Name=WP_224051812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349497.1;locus_tag=LDO49_RS12365;product=hypothetical protein;protein_id=WP_224051812.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 38747 39349 . + . ID=gene-LDO49_RS12370;Name=LDO49_RS12370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12370;old_locus_tag=BCEP4_170041 NZ_CAJZAV010000079.1 Protein Homology CDS 38747 39349 . + 0 ID=cds-WP_060280311.1;Parent=gene-LDO49_RS12370;Dbxref=GenBank:WP_060280311.1;Name=WP_060280311.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349498.1;locus_tag=LDO49_RS12370;product=TetR/AcrR family transcriptional regulator;protein_id=WP_060280311.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 39769 40488 . + . ID=gene-LDO49_RS12375;Name=LDO49_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12375;old_locus_tag=BCEP4_170042 NZ_CAJZAV010000079.1 Protein Homology CDS 39769 40488 . + 0 ID=cds-WP_021162521.1;Parent=gene-LDO49_RS12375;Dbxref=GenBank:WP_021162521.1;Name=WP_021162521.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725594.1;locus_tag=LDO49_RS12375;product=response regulator transcription factor;protein_id=WP_021162521.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 40488 41993 . + . ID=gene-LDO49_RS12380;Name=LDO49_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12380;old_locus_tag=BCEP4_170043 NZ_CAJZAV010000079.1 Protein Homology CDS 40488 41993 . + 0 ID=cds-WP_059491918.1;Parent=gene-LDO49_RS12380;Dbxref=GenBank:WP_059491918.1;Name=WP_059491918.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337235.1;locus_tag=LDO49_RS12380;product=sensor histidine kinase;protein_id=WP_059491918.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 42013 43116 . - . ID=gene-LDO49_RS12385;Name=LDO49_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12385;old_locus_tag=BCEP4_170044 NZ_CAJZAV010000079.1 Protein Homology CDS 42013 43116 . - 0 ID=cds-WP_042977091.1;Parent=gene-LDO49_RS12385;Dbxref=GenBank:WP_042977091.1;Name=WP_042977091.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545752.1;locus_tag=LDO49_RS12385;product=AraC family transcriptional regulator;protein_id=WP_042977091.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 43241 44029 . - . ID=gene-LDO49_RS12390;Name=LDO49_RS12390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12390;old_locus_tag=BCEP4_170045 NZ_CAJZAV010000079.1 Protein Homology CDS 43241 44029 . - 0 ID=cds-WP_224051813.1;Parent=gene-LDO49_RS12390;Dbxref=GenBank:WP_224051813.1;Name=WP_224051813.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006158136.1;locus_tag=LDO49_RS12390;product=HAD-IIB family hydrolase;protein_id=WP_224051813.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 44331 45965 . + . ID=gene-LDO49_RS12395;Name=LDO49_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12395;old_locus_tag=BCEP4_170046 NZ_CAJZAV010000079.1 Protein Homology CDS 44331 45965 . + 0 ID=cds-WP_060148339.1;Parent=gene-LDO49_RS12395;Dbxref=GenBank:WP_060148339.1;Name=WP_060148339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545750.1;locus_tag=LDO49_RS12395;product=AMP-binding protein;protein_id=WP_060148339.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 45965 47119 . + . ID=gene-LDO49_RS12400;Name=LDO49_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12400;old_locus_tag=BCEP4_170047 NZ_CAJZAV010000079.1 Protein Homology CDS 45965 47119 . + 0 ID=cds-WP_042977092.1;Parent=gene-LDO49_RS12400;Dbxref=GenBank:WP_042977092.1;Name=WP_042977092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481445.1;locus_tag=LDO49_RS12400;product=AraC family transcriptional regulator;protein_id=WP_042977092.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 47377 48066 . - . ID=gene-LDO49_RS12405;Name=LDO49_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12405;old_locus_tag=BCEP4_170050 NZ_CAJZAV010000079.1 Protein Homology CDS 47377 48066 . - 0 ID=cds-WP_048028670.1;Parent=gene-LDO49_RS12405;Dbxref=GenBank:WP_048028670.1;Name=WP_048028670.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217089.1;locus_tag=LDO49_RS12405;product=response regulator;protein_id=WP_048028670.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 48180 49622 . - . ID=gene-LDO49_RS12410;Name=LDO49_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12410;old_locus_tag=BCEP4_170051 NZ_CAJZAV010000079.1 Protein Homology CDS 48180 49622 . - 0 ID=cds-WP_224051814.1;Parent=gene-LDO49_RS12410;Dbxref=GenBank:WP_224051814.1;Name=WP_224051814.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548137.1;locus_tag=LDO49_RS12410;product=efflux transporter outer membrane subunit;protein_id=WP_224051814.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 49627 52770 . - . ID=gene-LDO49_RS12415;Name=LDO49_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12415;old_locus_tag=BCEP4_170052 NZ_CAJZAV010000079.1 Protein Homology CDS 49627 52770 . - 0 ID=cds-WP_224051815.1;Parent=gene-LDO49_RS12415;Dbxref=GenBank:WP_224051815.1;Name=WP_224051815.1;Ontology_term=GO:0042908,GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479394.1;locus_tag=LDO49_RS12415;product=multidrug efflux RND transporter permease subunit;protein_id=WP_224051815.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 52791 53951 . - . ID=gene-LDO49_RS12420;Name=LDO49_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12420;old_locus_tag=BCEP4_170053 NZ_CAJZAV010000079.1 Protein Homology CDS 52791 53951 . - 0 ID=cds-WP_059621649.1;Parent=gene-LDO49_RS12420;Dbxref=GenBank:WP_059621649.1;Name=WP_059621649.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489047.1;locus_tag=LDO49_RS12420;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_059621649.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 54227 54976 . - . ID=gene-LDO49_RS12425;Name=LDO49_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12425;old_locus_tag=BCEP4_170054 NZ_CAJZAV010000079.1 GeneMarkS-2+ CDS 54227 54976 . - 0 ID=cds-WP_060148353.1;Parent=gene-LDO49_RS12425;Dbxref=GenBank:WP_060148353.1;Name=WP_060148353.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS12425;product=hypothetical protein;protein_id=WP_060148353.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 55029 55469 . - . ID=gene-LDO49_RS12430;Name=LDO49_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12430;old_locus_tag=BCEP4_170055 NZ_CAJZAV010000079.1 Protein Homology CDS 55029 55469 . - 0 ID=cds-WP_124475279.1;Parent=gene-LDO49_RS12430;Dbxref=GenBank:WP_124475279.1;Name=WP_124475279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349542.1;locus_tag=LDO49_RS12430;product=hypothetical protein;protein_id=WP_124475279.1;transl_table=11 NZ_CAJZAV010000079.1 RefSeq gene 55526 55886 . - . ID=gene-LDO49_RS12435;Name=LDO49_RS12435;end_range=55886,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12435;old_locus_tag=BCEP4_170056;partial=true NZ_CAJZAV010000079.1 Protein Homology CDS 55526 55886 . - 1 ID=cds-WP_224051816.1;Parent=gene-LDO49_RS12435;Dbxref=GenBank:WP_224051816.1;Name=WP_224051816.1;Ontology_term=GO:0055085,GO:0015562;end_range=55886,.;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349543.1;locus_tag=LDO49_RS12435;partial=true;product=TolC family protein;protein_id=WP_224051816.1;transl_table=11 ##sequence-region NZ_CAJZAV010000080.1 1 20806 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000080.1 RefSeq region 1 20806 . + . ID=NZ_CAJZAV010000080.1:1..20806;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_170 NZ_CAJZAV010000080.1 RefSeq pseudogene 1 134 . - . ID=gene-LDO49_RS37975;Name=LDO49_RS37975;end_range=134,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37975;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000080.1 Protein Homology CDS 1 134 . - 2 ID=cds-LDO49_RS37975;Parent=gene-LDO49_RS37975;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=134,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522077.1;locus_tag=LDO49_RS37975;partial=true;product=ExbD/TolR family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000080.1 RefSeq gene 145 360 . - . ID=gene-LDO49_RS37980;Name=LDO49_RS37980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37980;old_locus_tag=BCEP4_1700001;partial=true;start_range=.,145 NZ_CAJZAV010000080.1 Protein Homology CDS 145 360 . - 0 ID=cds-WP_443797945.1;Parent=gene-LDO49_RS37980;Dbxref=GenBank:WP_443797945.1;Name=WP_443797945.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522077.1;locus_tag=LDO49_RS37980;partial=true;product=biopolymer transporter ExbD;protein_id=WP_443797945.1;start_range=.,145;transl_table=11 NZ_CAJZAV010000080.1 RefSeq gene 385 773 . - . ID=gene-LDO49_RS37985;Name=LDO49_RS37985;end_range=773,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37985;old_locus_tag=BCEP4_1700002;partial=true NZ_CAJZAV010000080.1 Protein Homology CDS 385 773 . - 2 ID=cds-WP_206146637.1;Parent=gene-LDO49_RS37985;Dbxref=GenBank:WP_206146637.1;Name=WP_206146637.1;Ontology_term=GO:0015031,GO:0015252,GO:0005886,GO:0016020;end_range=773,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=proton channel activity|0015252||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852204.1;locus_tag=LDO49_RS37985;partial=true;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_206146637.1;transl_table=11 NZ_CAJZAV010000080.1 RefSeq pseudogene 784 1007 . - . ID=gene-LDO49_RS37990;Name=LDO49_RS37990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37990;old_locus_tag=BCEP4_1700003;partial=true;pseudo=true;start_range=.,784 NZ_CAJZAV010000080.1 Protein Homology CDS 784 1007 . - 0 ID=cds-LDO49_RS37990;Parent=gene-LDO49_RS37990;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852204.1;locus_tag=LDO49_RS37990;partial=true;product=MotA/TolQ/ExbB proton channel family protein;pseudo=true;start_range=.,784;transl_table=11 NZ_CAJZAV010000080.1 RefSeq gene 1026 1823 . - . ID=gene-LDO49_RS12450;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=LDO49_RS12450;old_locus_tag=BCEP4_1700004 NZ_CAJZAV010000080.1 Protein Homology CDS 1026 1823 . - 0 ID=cds-WP_060072229.1;Parent=gene-LDO49_RS12450;Dbxref=GenBank:WP_060072229.1;Name=WP_060072229.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762730.1;locus_tag=LDO49_RS12450;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_060072229.1;transl_table=11 NZ_CAJZAV010000080.1 RefSeq gene 1886 2701 . - . ID=gene-LDO49_RS12455;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=LDO49_RS12455;old_locus_tag=BCEP4_1700005 NZ_CAJZAV010000080.1 Protein Homology CDS 1886 2701 . - 0 ID=cds-WP_021159285.1;Parent=gene-LDO49_RS12455;Dbxref=GenBank:WP_021159285.1;Name=WP_021159285.1;Ontology_term=GO:0019867;gbkey=CDS;gene=bamE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496725.1;locus_tag=LDO49_RS12455;product=outer membrane protein assembly factor BamE;protein_id=WP_021159285.1;transl_table=11 NZ_CAJZAV010000080.1 RefSeq gene 2844 3272 . + . ID=gene-LDO49_RS12460;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=LDO49_RS12460;old_locus_tag=BCEP4_1700007 NZ_CAJZAV010000080.1 Protein Homology CDS 2844 3272 . + 0 ID=cds-WP_006400349.1;Parent=gene-LDO49_RS12460;Dbxref=GenBank:WP_006400349.1;Name=WP_006400349.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006051897.1;locus_tag=LDO49_RS12460;product=ferric iron uptake transcriptional regulator;protein_id=WP_006400349.1;transl_table=11 NZ_CAJZAV010000080.1 RefSeq gene 3496 4020 . - . ID=gene-LDO49_RS12465;Name=LDO49_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12465;old_locus_tag=BCEP4_1700008 NZ_CAJZAV010000080.1 Protein Homology CDS 3496 4020 . - 0 ID=cds-WP_021159284.1;Parent=gene-LDO49_RS12465;Dbxref=GenBank:WP_021159284.1;Name=WP_021159284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898100.1;locus_tag=LDO49_RS12465;product=ureidoglycolate lyase;protein_id=WP_021159284.1;transl_table=11 NZ_CAJZAV010000080.1 RefSeq gene 4035 5042 . - . ID=gene-LDO49_RS12470;Name=alc;gbkey=Gene;gene=alc;gene_biotype=protein_coding;locus_tag=LDO49_RS12470;old_locus_tag=BCEP4_1700009 NZ_CAJZAV010000080.1 Protein Homology CDS 4035 5042 . - 0 ID=cds-WP_060072231.1;Parent=gene-LDO49_RS12470;Dbxref=GenBank:WP_060072231.1;Name=WP_060072231.1;Ontology_term=GO:0000256,GO:0004037;gbkey=CDS;gene=alc;go_function=allantoicase activity|0004037||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476931.1;locus_tag=LDO49_RS12470;product=allantoicase;protein_id=WP_060072231.1;transl_table=11 NZ_CAJZAV010000080.1 RefSeq gene 5149 6471 . - . ID=gene-LDO49_RS12475;Name=LDO49_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12475;old_locus_tag=BCEP4_1700010 NZ_CAJZAV010000080.1 Protein Homology CDS 5149 6471 . - 0 ID=cds-WP_021159282.1;Parent=gene-LDO49_RS12475;Dbxref=GenBank:WP_021159282.1;Name=WP_021159282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350923.1;locus_tag=LDO49_RS12475;product=C4-dicarboxylate transporter DctA;protein_id=WP_021159282.1;transl_table=11 NZ_CAJZAV010000080.1 RefSeq gene 6685 7407 . + . ID=gene-LDO49_RS12480;Name=LDO49_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12480;old_locus_tag=BCEP4_1700011 NZ_CAJZAV010000080.1 Protein Homology CDS 6685 7407 . + 0 ID=cds-WP_081052479.1;Parent=gene-LDO49_RS12480;Dbxref=GenBank:WP_081052479.1;Name=WP_081052479.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407575.1;locus_tag=LDO49_RS12480;product=FadR/GntR family transcriptional regulator;protein_id=WP_081052479.1;transl_table=11 NZ_CAJZAV010000080.1 RefSeq gene 7444 8334 . - . ID=gene-LDO49_RS12485;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=LDO49_RS12485;old_locus_tag=BCEP4_1700012 NZ_CAJZAV010000080.1 Protein Homology CDS 7444 8334 . - 0 ID=cds-WP_060054850.1;Parent=gene-LDO49_RS12485;Dbxref=GenBank:WP_060054850.1;Name=WP_060054850.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350921.1;locus_tag=LDO49_RS12485;product=transcriptional regulator CynR;protein_id=WP_060054850.1;transl_table=11 NZ_CAJZAV010000080.1 RefSeq gene 8647 9846 . + . ID=gene-LDO49_RS12490;Name=LDO49_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12490;old_locus_tag=BCEP4_1700013 NZ_CAJZAV010000080.1 Protein Homology CDS 8647 9846 . + 0 ID=cds-WP_042974892.1;Parent=gene-LDO49_RS12490;Dbxref=GenBank:WP_042974892.1;Name=WP_042974892.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214132.1;locus_tag=LDO49_RS12490;product=MFS transporter;protein_id=WP_042974892.1;transl_table=11 NZ_CAJZAV010000080.1 RefSeq gene 9954 11012 . - . ID=gene-LDO49_RS12495;Name=LDO49_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12495;old_locus_tag=BCEP4_1700014 NZ_CAJZAV010000080.1 Protein Homology CDS 9954 11012 . - 0 ID=cds-WP_059484616.1;Parent=gene-LDO49_RS12495;Dbxref=GenBank:WP_059484616.1;Name=WP_059484616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327885.1;locus_tag=LDO49_RS12495;product=L-idonate 5-dehydrogenase;protein_id=WP_059484616.1;transl_table=11 NZ_CAJZAV010000080.1 RefSeq gene 11023 11979 . - . ID=gene-LDO49_RS12500;Name=LDO49_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12500;old_locus_tag=BCEP4_1700015 NZ_CAJZAV010000080.1 Protein Homology CDS 11023 11979 . - 0 ID=cds-WP_060072233.1;Parent=gene-LDO49_RS12500;Dbxref=GenBank:WP_060072233.1;Name=WP_060072233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350918.1;locus_tag=LDO49_RS12500;product=2-hydroxyacid dehydrogenase;protein_id=WP_060072233.1;transl_table=11 NZ_CAJZAV010000080.1 RefSeq gene 12049 13497 . - . ID=gene-LDO49_RS12505;Name=LDO49_RS12505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12505;old_locus_tag=BCEP4_1700016 NZ_CAJZAV010000080.1 Protein Homology CDS 12049 13497 . - 0 ID=cds-WP_124475548.1;Parent=gene-LDO49_RS12505;Dbxref=GenBank:WP_124475548.1;Name=WP_124475548.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898108.1;locus_tag=LDO49_RS12505;product=MFS transporter;protein_id=WP_124475548.1;transl_table=11 NZ_CAJZAV010000080.1 RefSeq gene 13652 14425 . - . ID=gene-LDO49_RS12510;Name=LDO49_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12510;old_locus_tag=BCEP4_1700017 NZ_CAJZAV010000080.1 Protein Homology CDS 13652 14425 . - 0 ID=cds-WP_027788397.1;Parent=gene-LDO49_RS12510;Dbxref=GenBank:WP_027788397.1;Name=WP_027788397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492962.1;locus_tag=LDO49_RS12510;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_027788397.1;transl_table=11 NZ_CAJZAV010000080.1 RefSeq gene 14577 15467 . + . ID=gene-LDO49_RS12515;Name=LDO49_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12515;old_locus_tag=BCEP4_1700018 NZ_CAJZAV010000080.1 Protein Homology CDS 14577 15467 . + 0 ID=cds-WP_021159274.1;Parent=gene-LDO49_RS12515;Dbxref=GenBank:WP_021159274.1;Name=WP_021159274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496730.1;locus_tag=LDO49_RS12515;product=LysR substrate-binding domain-containing protein;protein_id=WP_021159274.1;transl_table=11 NZ_CAJZAV010000080.1 RefSeq gene 15543 16553 . - . ID=gene-LDO49_RS12520;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=LDO49_RS12520;old_locus_tag=BCEP4_1700019 NZ_CAJZAV010000080.1 Protein Homology CDS 15543 16553 . - 0 ID=cds-WP_006485712.1;Parent=gene-LDO49_RS12520;Dbxref=GenBank:WP_006485712.1;Name=WP_006485712.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883251.1;locus_tag=LDO49_RS12520;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_006485712.1;transl_table=11 NZ_CAJZAV010000080.1 RefSeq gene 16640 18667 . - . ID=gene-LDO49_RS12525;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=LDO49_RS12525;old_locus_tag=BCEP4_1700020 NZ_CAJZAV010000080.1 Protein Homology CDS 16640 18667 . - 0 ID=cds-WP_059675922.1;Parent=gene-LDO49_RS12525;Dbxref=GenBank:WP_059675922.1;Name=WP_059675922.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424068.1;locus_tag=LDO49_RS12525;product=transketolase;protein_id=WP_059675922.1;transl_table=11 NZ_CAJZAV010000080.1 RefSeq gene 18927 19784 . + . ID=gene-LDO49_RS12530;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=LDO49_RS12530;old_locus_tag=BCEP4_1700021 NZ_CAJZAV010000080.1 Protein Homology CDS 18927 19784 . + 0 ID=cds-WP_060072236.1;Parent=gene-LDO49_RS12530;Dbxref=GenBank:WP_060072236.1;Name=WP_060072236.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203762.1;locus_tag=LDO49_RS12530;product=polyamine aminopropyltransferase;protein_id=WP_060072236.1;transl_table=11 NZ_CAJZAV010000080.1 RefSeq gene 19941 20357 . + . ID=gene-LDO49_RS12535;Name=LDO49_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12535;old_locus_tag=BCEP4_1700022 NZ_CAJZAV010000080.1 Protein Homology CDS 19941 20357 . + 0 ID=cds-WP_021159271.1;Parent=gene-LDO49_RS12535;Dbxref=GenBank:WP_021159271.1;Name=WP_021159271.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527755.1;locus_tag=LDO49_RS12535;product=VOC family protein;protein_id=WP_021159271.1;transl_table=11 NZ_CAJZAV010000080.1 RefSeq gene 20375 20806 . + . ID=gene-LDO49_RS12540;Name=LDO49_RS12540;end_range=20806,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12540;partial=true NZ_CAJZAV010000080.1 Protein Homology CDS 20375 20806 . + 0 ID=cds-WP_224051820.1;Parent=gene-LDO49_RS12540;Dbxref=GenBank:WP_224051820.1;Name=WP_224051820.1;Ontology_term=GO:0006364,GO:0008168;end_range=20806,.;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194189.1;locus_tag=LDO49_RS12540;partial=true;product=RsmE family RNA methyltransferase;protein_id=WP_224051820.1;transl_table=11 ##sequence-region NZ_CAJZAV010000081.1 1 4690 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000081.1 RefSeq region 1 4690 . + . ID=NZ_CAJZAV010000081.1:1..4690;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_171 NZ_CAJZAV010000081.1 RefSeq gene 239 571 . - . ID=gene-LDO49_RS12545;Name=LDO49_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12545;old_locus_tag=BCEP4_1710002 NZ_CAJZAV010000081.1 Protein Homology CDS 239 571 . - 0 ID=cds-WP_021164035.1;Parent=gene-LDO49_RS12545;Dbxref=GenBank:WP_021164035.1;Name=WP_021164035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197170.1;locus_tag=LDO49_RS12545;product=flagellar protein FliT;protein_id=WP_021164035.1;transl_table=11 NZ_CAJZAV010000081.1 RefSeq gene 568 1002 . - . ID=gene-LDO49_RS12550;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=LDO49_RS12550;old_locus_tag=BCEP4_1710003 NZ_CAJZAV010000081.1 Protein Homology CDS 568 1002 . - 0 ID=cds-WP_021164034.1;Parent=gene-LDO49_RS12550;Dbxref=GenBank:WP_021164034.1;Name=WP_021164034.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203429.1;locus_tag=LDO49_RS12550;product=flagellar export chaperone FliS;protein_id=WP_021164034.1;transl_table=11 NZ_CAJZAV010000081.1 RefSeq gene 1228 1572 . - . ID=gene-LDO49_RS12555;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=LDO49_RS12555;old_locus_tag=BCEP4_1710004 NZ_CAJZAV010000081.1 Protein Homology CDS 1228 1572 . - 0 ID=cds-WP_021164033.1;Parent=gene-LDO49_RS12555;Dbxref=GenBank:WP_021164033.1;Name=WP_021164033.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761724.1;locus_tag=LDO49_RS12555;product=flagellar hook-basal body complex protein FliE;protein_id=WP_021164033.1;transl_table=11 NZ_CAJZAV010000081.1 RefSeq gene 1821 3584 . + . ID=gene-LDO49_RS12560;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=LDO49_RS12560;old_locus_tag=BCEP4_1710005 NZ_CAJZAV010000081.1 Protein Homology CDS 1821 3584 . + 0 ID=cds-WP_048026708.1;Parent=gene-LDO49_RS12560;Dbxref=GenBank:WP_048026708.1;Name=WP_048026708.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197168.1;locus_tag=LDO49_RS12560;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_048026708.1;transl_table=11 NZ_CAJZAV010000081.1 RefSeq gene 3574 4569 . + . ID=gene-LDO49_RS12565;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=LDO49_RS12565;old_locus_tag=BCEP4_1710006 NZ_CAJZAV010000081.1 Protein Homology CDS 3574 4569 . + 0 ID=cds-WP_027788887.1;Parent=gene-LDO49_RS12565;Dbxref=GenBank:WP_027788887.1;Name=WP_027788887.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334572.1;locus_tag=LDO49_RS12565;product=flagellar motor switch protein FliG;protein_id=WP_027788887.1;transl_table=11 NZ_CAJZAV010000081.1 RefSeq pseudogene 4562 4690 . + . ID=gene-LDO49_RS12570;Name=LDO49_RS12570;end_range=4690,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS12570;partial=true;pseudo=true NZ_CAJZAV010000081.1 Protein Homology CDS 4562 4690 . + 0 ID=cds-LDO49_RS12570;Parent=gene-LDO49_RS12570;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4690,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525877.1;locus_tag=LDO49_RS12570;partial=true;product=flagellar assembly protein FliH;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000082.1 1 9619 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000082.1 RefSeq region 1 9619 . + . ID=NZ_CAJZAV010000082.1:1..9619;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_172 NZ_CAJZAV010000082.1 RefSeq gene 1 128 . + . ID=gene-LDO49_RS37995;Name=LDO49_RS37995;end_range=128,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37995;old_locus_tag=BCEP4_1720001;partial=true;start_range=.,1 NZ_CAJZAV010000082.1 Protein Homology CDS 1 128 . + 1 ID=cds-WP_443797948.1;Parent=gene-LDO49_RS37995;Dbxref=GenBank:WP_443797948.1;Name=WP_443797948.1;end_range=128,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660317.1;locus_tag=LDO49_RS37995;partial=true;product=DUF3348 family protein;protein_id=WP_443797948.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000082.1 RefSeq gene 139 215 . + . ID=gene-LDO49_RS38000;Name=LDO49_RS38000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38000;partial=true;start_range=.,139 NZ_CAJZAV010000082.1 Protein Homology CDS 139 215 . + 2 ID=cds-WP_443797949.1;Parent=gene-LDO49_RS38000;Dbxref=GenBank:WP_443797949.1;Name=WP_443797949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479650.1;locus_tag=LDO49_RS38000;partial=true;product=DUF3348 family protein;protein_id=WP_443797949.1;start_range=.,139;transl_table=11 NZ_CAJZAV010000082.1 RefSeq gene 226 432 . + . ID=gene-LDO49_RS38005;Name=LDO49_RS38005;end_range=432,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38005;old_locus_tag=BCEP4_1720002;partial=true NZ_CAJZAV010000082.1 Protein Homology CDS 226 432 . + 0 ID=cds-WP_443797946.1;Parent=gene-LDO49_RS38005;Dbxref=GenBank:WP_443797946.1;Name=WP_443797946.1;end_range=432,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356050.1;locus_tag=LDO49_RS38005;partial=true;product=hypothetical protein;protein_id=WP_443797946.1;transl_table=11 NZ_CAJZAV010000082.1 RefSeq gene 443 3301 . + . ID=gene-LDO49_RS12580;Name=LDO49_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12580;old_locus_tag=BCEP4_1720003;partial=true;start_range=.,443 NZ_CAJZAV010000082.1 Protein Homology CDS 443 3301 . + 0 ID=cds-WP_443797947.1;Parent=gene-LDO49_RS12580;Dbxref=GenBank:WP_443797947.1;Name=WP_443797947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491237.1;locus_tag=LDO49_RS12580;partial=true;product=DUF802 domain-containing protein;protein_id=WP_443797947.1;start_range=.,443;transl_table=11 NZ_CAJZAV010000082.1 RefSeq gene 3305 3949 . + . ID=gene-LDO49_RS12585;Name=LDO49_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12585;old_locus_tag=BCEP4_1720004 NZ_CAJZAV010000082.1 Protein Homology CDS 3305 3949 . + 0 ID=cds-WP_021163899.1;Parent=gene-LDO49_RS12585;Dbxref=GenBank:WP_021163899.1;Name=WP_021163899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217569.1;locus_tag=LDO49_RS12585;product=OmpA family protein;protein_id=WP_021163899.1;transl_table=11 NZ_CAJZAV010000082.1 RefSeq gene 3946 4569 . + . ID=gene-LDO49_RS12590;Name=LDO49_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12590;old_locus_tag=BCEP4_1720005 NZ_CAJZAV010000082.1 Protein Homology CDS 3946 4569 . + 0 ID=cds-WP_224051821.1;Parent=gene-LDO49_RS12590;Dbxref=GenBank:WP_224051821.1;Name=WP_224051821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494009.1;locus_tag=LDO49_RS12590;product=DUF2894 domain-containing protein;protein_id=WP_224051821.1;transl_table=11 NZ_CAJZAV010000082.1 RefSeq gene 4604 5107 . - . ID=gene-LDO49_RS12595;Name=LDO49_RS12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12595;old_locus_tag=BCEP4_1720006 NZ_CAJZAV010000082.1 Protein Homology CDS 4604 5107 . - 0 ID=cds-WP_060071130.1;Parent=gene-LDO49_RS12595;Dbxref=GenBank:WP_060071130.1;Name=WP_060071130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356047.1;locus_tag=LDO49_RS12595;product=DM13 domain-containing protein;protein_id=WP_060071130.1;transl_table=11 NZ_CAJZAV010000082.1 RefSeq gene 5356 5673 . + . ID=gene-LDO49_RS12600;Name=LDO49_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12600;old_locus_tag=BCEP4_1720007 NZ_CAJZAV010000082.1 Protein Homology CDS 5356 5673 . + 0 ID=cds-WP_048020252.1;Parent=gene-LDO49_RS12600;Dbxref=GenBank:WP_048020252.1;Name=WP_048020252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328508.1;locus_tag=LDO49_RS12600;product=DUF4148 domain-containing protein;protein_id=WP_048020252.1;transl_table=11 NZ_CAJZAV010000082.1 RefSeq gene 5753 6325 . - . ID=gene-LDO49_RS12605;Name=LDO49_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12605;old_locus_tag=BCEP4_1720008 NZ_CAJZAV010000082.1 Protein Homology CDS 5753 6325 . - 0 ID=cds-WP_060071133.1;Parent=gene-LDO49_RS12605;Dbxref=GenBank:WP_060071133.1;Name=WP_060071133.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755242.1;locus_tag=LDO49_RS12605;product=NADPH-dependent FMN reductase;protein_id=WP_060071133.1;transl_table=11 NZ_CAJZAV010000082.1 RefSeq gene 6380 7057 . - . ID=gene-LDO49_RS12610;Name=LDO49_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12610;old_locus_tag=BCEP4_1720009 NZ_CAJZAV010000082.1 Protein Homology CDS 6380 7057 . - 0 ID=cds-WP_060071137.1;Parent=gene-LDO49_RS12610;Dbxref=GenBank:WP_060071137.1;Name=WP_060071137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365445.1;locus_tag=LDO49_RS12610;product=hypothetical protein;protein_id=WP_060071137.1;transl_table=11 NZ_CAJZAV010000082.1 RefSeq gene 7817 9100 . - . ID=gene-LDO49_RS12615;Name=LDO49_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12615;old_locus_tag=BCEP4_1720011 NZ_CAJZAV010000082.1 Protein Homology CDS 7817 9100 . - 0 ID=cds-WP_021163891.1;Parent=gene-LDO49_RS12615;Dbxref=GenBank:WP_021163891.1;Name=WP_021163891.1;Ontology_term=GO:0006481,GO:0004671,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity|0004671||IEA;go_process=C-terminal protein methylation|0006481||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397897.1;locus_tag=LDO49_RS12615;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=WP_021163891.1;transl_table=11 NZ_CAJZAV010000082.1 RefSeq pseudogene 9221 9380 . - . ID=gene-LDO49_RS38010;Name=LDO49_RS38010;end_range=9380,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38010;old_locus_tag=BCEP4_1720012;partial=true;pseudo=true NZ_CAJZAV010000082.1 Protein Homology CDS 9221 9380 . - 1 ID=cds-LDO49_RS38010;Parent=gene-LDO49_RS38010;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=9380,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548340.1;locus_tag=LDO49_RS38010;partial=true;product=collagen-like triple helix repeat-containing protein;pseudo=true;transl_table=11 NZ_CAJZAV010000082.1 RefSeq pseudogene 9391 9619 . - . ID=gene-LDO49_RS38015;Name=LDO49_RS38015;end_range=9619,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38015;partial=true;pseudo=true;start_range=.,9391 NZ_CAJZAV010000082.1 Protein Homology CDS 9391 9619 . - 1 ID=cds-LDO49_RS38015;Parent=gene-LDO49_RS38015;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=9619,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548340.1;locus_tag=LDO49_RS38015;partial=true;product=collagen-like triple helix repeat-containing protein;pseudo=true;start_range=.,9391;transl_table=11 ##sequence-region NZ_CAJZAV010000083.1 1 13041 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000083.1 RefSeq region 1 13041 . + . ID=NZ_CAJZAV010000083.1:1..13041;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_173 NZ_CAJZAV010000083.1 RefSeq gene 1 893 . + . ID=gene-LDO49_RS12625;Name=LDO49_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12625;old_locus_tag=BCEP4_1730001;partial=true;start_range=.,1 NZ_CAJZAV010000083.1 Protein Homology CDS 1 893 . + 2 ID=cds-WP_224051822.1;Parent=gene-LDO49_RS12625;Dbxref=GenBank:WP_224051822.1;Name=WP_224051822.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496217.1;locus_tag=LDO49_RS12625;partial=true;product=FecCD family ABC transporter permease;protein_id=WP_224051822.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000083.1 RefSeq gene 913 1734 . + . ID=gene-LDO49_RS12630;Name=LDO49_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12630;old_locus_tag=BCEP4_1730002 NZ_CAJZAV010000083.1 Protein Homology CDS 913 1734 . + 0 ID=cds-WP_060074455.1;Parent=gene-LDO49_RS12630;Dbxref=GenBank:WP_060074455.1;Name=WP_060074455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353831.1;locus_tag=LDO49_RS12630;product=heme ABC transporter ATP-binding protein;protein_id=WP_060074455.1;transl_table=11 NZ_CAJZAV010000083.1 RefSeq gene 1832 2215 . + . ID=gene-LDO49_RS12635;Name=LDO49_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12635;old_locus_tag=BCEP4_1730003 NZ_CAJZAV010000083.1 Protein Homology CDS 1832 2215 . + 0 ID=cds-WP_060074456.1;Parent=gene-LDO49_RS12635;Dbxref=GenBank:WP_060074456.1;Name=WP_060074456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366994.1;locus_tag=LDO49_RS12635;product=VOC family protein;protein_id=WP_060074456.1;transl_table=11 NZ_CAJZAV010000083.1 RefSeq gene 2245 2856 . - . ID=gene-LDO49_RS12640;Name=LDO49_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12640;old_locus_tag=BCEP4_1730004 NZ_CAJZAV010000083.1 Protein Homology CDS 2245 2856 . - 0 ID=cds-WP_060074457.1;Parent=gene-LDO49_RS12640;Dbxref=GenBank:WP_060074457.1;Name=WP_060074457.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900898.1;locus_tag=LDO49_RS12640;product=trimeric intracellular cation channel family protein;protein_id=WP_060074457.1;transl_table=11 NZ_CAJZAV010000083.1 RefSeq gene 2865 4985 . - . ID=gene-LDO49_RS12645;Name=LDO49_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12645;old_locus_tag=BCEP4_1730005 NZ_CAJZAV010000083.1 Protein Homology CDS 2865 4985 . - 0 ID=cds-WP_059496280.1;Parent=gene-LDO49_RS12645;Dbxref=GenBank:WP_059496280.1;Name=WP_059496280.1;Ontology_term=GO:0006508,GO:0009252,GO:0008658,GO:0008955,GO:0009002;gbkey=CDS;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496214.1;locus_tag=LDO49_RS12645;product=penicillin-binding protein 1A;protein_id=WP_059496280.1;transl_table=11 NZ_CAJZAV010000083.1 RefSeq gene 5222 6016 . + . ID=gene-LDO49_RS12650;Name=LDO49_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12650;old_locus_tag=BCEP4_1730006 NZ_CAJZAV010000083.1 Protein Homology CDS 5222 6016 . + 0 ID=cds-WP_060074458.1;Parent=gene-LDO49_RS12650;Dbxref=GenBank:WP_060074458.1;Name=WP_060074458.1;Ontology_term=GO:0016310,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496213.1;locus_tag=LDO49_RS12650;product=aminoglycoside phosphotransferase family protein;protein_id=WP_060074458.1;transl_table=11 NZ_CAJZAV010000083.1 RefSeq gene 6190 6540 . + . ID=gene-LDO49_RS12655;Name=LDO49_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12655 NZ_CAJZAV010000083.1 Protein Homology CDS 6190 6540 . + 0 ID=cds-WP_042978265.1;Parent=gene-LDO49_RS12655;Dbxref=GenBank:WP_042978265.1;Name=WP_042978265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017923316.1;locus_tag=LDO49_RS12655;product=VOC family protein;protein_id=WP_042978265.1;transl_table=11 NZ_CAJZAV010000083.1 RefSeq gene 6715 7710 . - . ID=gene-LDO49_RS12660;Name=LDO49_RS12660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12660;old_locus_tag=BCEP4_1730009 NZ_CAJZAV010000083.1 Protein Homology CDS 6715 7710 . - 0 ID=cds-WP_060074459.1;Parent=gene-LDO49_RS12660;Dbxref=GenBank:WP_060074459.1;Name=WP_060074459.1;Ontology_term=GO:0003960,GO:0048038,GO:0070402;gbkey=CDS;go_function=quinone reductase (NADPH) activity|0003960||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882224.1;locus_tag=LDO49_RS12660;product=NAD(P)H-quinone oxidoreductase;protein_id=WP_060074459.1;transl_table=11 NZ_CAJZAV010000083.1 RefSeq gene 7707 8084 . - . ID=gene-LDO49_RS12665;Name=LDO49_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12665;old_locus_tag=BCEP4_1730010 NZ_CAJZAV010000083.1 Protein Homology CDS 7707 8084 . - 0 ID=cds-WP_021164021.1;Parent=gene-LDO49_RS12665;Dbxref=GenBank:WP_021164021.1;Name=WP_021164021.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882225.1;locus_tag=LDO49_RS12665;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_021164021.1;transl_table=11 NZ_CAJZAV010000083.1 RefSeq gene 8098 9534 . - . ID=gene-LDO49_RS12670;Name=LDO49_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12670;old_locus_tag=BCEP4_1730011 NZ_CAJZAV010000083.1 Protein Homology CDS 8098 9534 . - 0 ID=cds-WP_060074460.1;Parent=gene-LDO49_RS12670;Dbxref=GenBank:WP_060074460.1;Name=WP_060074460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013338256.1;locus_tag=LDO49_RS12670;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_060074460.1;transl_table=11 NZ_CAJZAV010000083.1 RefSeq gene 9892 10827 . + . ID=gene-LDO49_RS12675;Name=LDO49_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12675;old_locus_tag=BCEP4_1730012 NZ_CAJZAV010000083.1 Protein Homology CDS 9892 10827 . + 0 ID=cds-WP_124475478.1;Parent=gene-LDO49_RS12675;Dbxref=GenBank:WP_124475478.1;Name=WP_124475478.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882227.1;locus_tag=LDO49_RS12675;product=LysR family transcriptional regulator;protein_id=WP_124475478.1;transl_table=11 NZ_CAJZAV010000083.1 RefSeq gene 11078 11914 . - . ID=gene-LDO49_RS12680;Name=LDO49_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12680;old_locus_tag=BCEP4_1730013 NZ_CAJZAV010000083.1 Protein Homology CDS 11078 11914 . - 0 ID=cds-WP_060074462.1;Parent=gene-LDO49_RS12680;Dbxref=GenBank:WP_060074462.1;Name=WP_060074462.1;Ontology_term=GO:0010136,GO:0004037,GO:0071522;gbkey=CDS;go_function=allantoicase activity|0004037||IEA,ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880980.1;locus_tag=LDO49_RS12680;product=bifunctional allantoicase/(S)-ureidoglycine aminohydrolase;protein_id=WP_060074462.1;transl_table=11 NZ_CAJZAV010000083.1 RefSeq pseudogene 12816 13041 . - . ID=gene-LDO49_RS12685;Name=LDO49_RS12685;end_range=13041,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS12685;old_locus_tag=BCEP4_1730016;partial=true;pseudo=true NZ_CAJZAV010000083.1 Protein Homology CDS 12816 13041 . - 1 ID=cds-LDO49_RS12685;Parent=gene-LDO49_RS12685;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=13041,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880981.1;locus_tag=LDO49_RS12685;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000084.1 1 2169 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000084.1 RefSeq region 1 2169 . + . ID=NZ_CAJZAV010000084.1:1..2169;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_174 NZ_CAJZAV010000084.1 RefSeq gene 1 497 . + . ID=gene-LDO49_RS12690;Name=LDO49_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12690;old_locus_tag=BCEP4_1740001;partial=true;start_range=.,1 NZ_CAJZAV010000084.1 Protein Homology CDS 1 497 . + 2 ID=cds-WP_224051823.1;Parent=gene-LDO49_RS12690;Dbxref=GenBank:WP_224051823.1;Name=WP_224051823.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334492.1;locus_tag=LDO49_RS12690;partial=true;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_224051823.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000084.1 RefSeq gene 559 1674 . + . ID=gene-LDO49_RS12695;Name=LDO49_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12695;old_locus_tag=BCEP4_1740002 NZ_CAJZAV010000084.1 Protein Homology CDS 559 1674 . + 0 ID=cds-WP_021163819.1;Parent=gene-LDO49_RS12695;Dbxref=GenBank:WP_021163819.1;Name=WP_021163819.1;Ontology_term=GO:0015846,GO:0019808,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411182.1;locus_tag=LDO49_RS12695;product=polyamine ABC transporter substrate-binding protein;protein_id=WP_021163819.1;transl_table=11 NZ_CAJZAV010000084.1 RefSeq gene 1863 2169 . + . ID=gene-LDO49_RS12700;Name=LDO49_RS12700;end_range=2169,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12700;partial=true NZ_CAJZAV010000084.1 Protein Homology CDS 1863 2169 . + 0 ID=cds-WP_224051824.1;Parent=gene-LDO49_RS12700;Dbxref=GenBank:WP_224051824.1;Name=WP_224051824.1;Ontology_term=GO:0005524;end_range=2169,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017774051.1;locus_tag=LDO49_RS12700;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_224051824.1;transl_table=11 ##sequence-region NZ_CAJZAV010000085.1 1 18117 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000085.1 RefSeq region 1 18117 . + . ID=NZ_CAJZAV010000085.1:1..18117;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_175 NZ_CAJZAV010000085.1 RefSeq gene 1 555 . + . ID=gene-LDO49_RS12705;Name=LDO49_RS12705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12705;old_locus_tag=BCEP4_1750001;partial=true;start_range=.,1 NZ_CAJZAV010000085.1 Protein Homology CDS 1 555 . + 0 ID=cds-WP_224051826.1;Parent=gene-LDO49_RS12705;Dbxref=GenBank:WP_224051826.1;Name=WP_224051826.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753750.1;locus_tag=LDO49_RS12705;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_224051826.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000085.1 RefSeq gene 570 1697 . + . ID=gene-LDO49_RS12710;Name=LDO49_RS12710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12710;old_locus_tag=BCEP4_1750002 NZ_CAJZAV010000085.1 Protein Homology CDS 570 1697 . + 0 ID=cds-WP_124843687.1;Parent=gene-LDO49_RS12710;Dbxref=GenBank:WP_124843687.1;Name=WP_124843687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498291.1;locus_tag=LDO49_RS12710;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_124843687.1;transl_table=11 NZ_CAJZAV010000085.1 RefSeq gene 1873 3042 . + . ID=gene-LDO49_RS12715;Name=LDO49_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12715;old_locus_tag=BCEP4_1750003 NZ_CAJZAV010000085.1 Protein Homology CDS 1873 3042 . + 0 ID=cds-WP_224051828.1;Parent=gene-LDO49_RS12715;Dbxref=GenBank:WP_224051828.1;Name=WP_224051828.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660488.1;locus_tag=LDO49_RS12715;product=helix-turn-helix domain-containing protein;protein_id=WP_224051828.1;transl_table=11 NZ_CAJZAV010000085.1 RefSeq gene 3294 4751 . - . ID=gene-LDO49_RS12720;Name=iaaH;gbkey=Gene;gene=iaaH;gene_biotype=protein_coding;locus_tag=LDO49_RS12720;old_locus_tag=BCEP4_1750004 NZ_CAJZAV010000085.1 Protein Homology CDS 3294 4751 . - 0 ID=cds-WP_224051829.1;Parent=gene-LDO49_RS12720;Dbxref=GenBank:WP_224051829.1;Name=WP_224051829.1;gbkey=CDS;gene=iaaH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013234391.1;locus_tag=LDO49_RS12720;product=indoleacetamide hydrolase;protein_id=WP_224051829.1;transl_table=11 NZ_CAJZAV010000085.1 RefSeq gene 4854 5567 . - . ID=gene-LDO49_RS12725;Name=LDO49_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12725;old_locus_tag=BCEP4_1750005 NZ_CAJZAV010000085.1 Protein Homology CDS 4854 5567 . - 0 ID=cds-WP_059492958.1;Parent=gene-LDO49_RS12725;Dbxref=GenBank:WP_059492958.1;Name=WP_059492958.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349731.1;locus_tag=LDO49_RS12725;product=helix-turn-helix transcriptional regulator;protein_id=WP_059492958.1;transl_table=11 NZ_CAJZAV010000085.1 RefSeq gene 5564 5998 . - . ID=gene-LDO49_RS12730;Name=LDO49_RS12730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12730;old_locus_tag=BCEP4_1750006 NZ_CAJZAV010000085.1 GeneMarkS-2+ CDS 5564 5998 . - 0 ID=cds-WP_165580624.1;Parent=gene-LDO49_RS12730;Dbxref=GenBank:WP_165580624.1;Name=WP_165580624.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS12730;product=hypothetical protein;protein_id=WP_165580624.1;transl_table=11 NZ_CAJZAV010000085.1 RefSeq gene 6137 8296 . - . ID=gene-LDO49_RS12735;Name=LDO49_RS12735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12735;old_locus_tag=BCEP4_1750007 NZ_CAJZAV010000085.1 Protein Homology CDS 6137 8296 . - 0 ID=cds-WP_224051830.1;Parent=gene-LDO49_RS12735;Dbxref=GenBank:WP_224051830.1;Name=WP_224051830.1;Ontology_term=GO:0046355,GO:0004557;gbkey=CDS;go_function=alpha-galactosidase activity|0004557||IEA;go_process=mannan catabolic process|0046355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878081.1;locus_tag=LDO49_RS12735;product=alpha-galactosidase D;protein_id=WP_224051830.1;transl_table=11 NZ_CAJZAV010000085.1 RefSeq gene 8636 9538 . - . ID=gene-LDO49_RS12740;Name=LDO49_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12740;old_locus_tag=BCEP4_1750008 NZ_CAJZAV010000085.1 Protein Homology CDS 8636 9538 . - 0 ID=cds-WP_048028954.1;Parent=gene-LDO49_RS12740;Dbxref=GenBank:WP_048028954.1;Name=WP_048028954.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336651.1;locus_tag=LDO49_RS12740;product=LysR family transcriptional regulator;protein_id=WP_048028954.1;transl_table=11 NZ_CAJZAV010000085.1 RefSeq gene 9697 10473 . + . ID=gene-LDO49_RS12745;Name=LDO49_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12745;old_locus_tag=BCEP4_1750009 NZ_CAJZAV010000085.1 Protein Homology CDS 9697 10473 . + 0 ID=cds-WP_060125380.1;Parent=gene-LDO49_RS12745;Dbxref=GenBank:WP_060125380.1;Name=WP_060125380.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545521.1;locus_tag=LDO49_RS12745;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_060125380.1;transl_table=11 NZ_CAJZAV010000085.1 RefSeq gene 10502 11698 . - . ID=gene-LDO49_RS12750;Name=LDO49_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12750;old_locus_tag=BCEP4_1750010 NZ_CAJZAV010000085.1 Protein Homology CDS 10502 11698 . - 0 ID=cds-WP_060147880.1;Parent=gene-LDO49_RS12750;Dbxref=GenBank:WP_060147880.1;Name=WP_060147880.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545522.1;locus_tag=LDO49_RS12750;product=sugar transporter;protein_id=WP_060147880.1;transl_table=11 NZ_CAJZAV010000085.1 RefSeq gene 11912 12586 . + . ID=gene-LDO49_RS12755;Name=LDO49_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12755;old_locus_tag=BCEP4_1750011 NZ_CAJZAV010000085.1 Protein Homology CDS 11912 12586 . + 0 ID=cds-WP_021161534.1;Parent=gene-LDO49_RS12755;Dbxref=GenBank:WP_021161534.1;Name=WP_021161534.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008347718.1;locus_tag=LDO49_RS12755;product=HAD family hydrolase;protein_id=WP_021161534.1;transl_table=11 NZ_CAJZAV010000085.1 RefSeq gene 13174 14457 . + . ID=gene-LDO49_RS12760;Name=LDO49_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12760;old_locus_tag=BCEP4_1750015 NZ_CAJZAV010000085.1 Protein Homology CDS 13174 14457 . + 0 ID=cds-WP_124843677.1;Parent=gene-LDO49_RS12760;Dbxref=GenBank:WP_124843677.1;Name=WP_124843677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336643.1;locus_tag=LDO49_RS12760;product=DUF6402 family protein;protein_id=WP_124843677.1;transl_table=11 NZ_CAJZAV010000085.1 RefSeq gene 14460 14864 . + . ID=gene-LDO49_RS12765;Name=LDO49_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12765;old_locus_tag=BCEP4_1750016 NZ_CAJZAV010000085.1 GeneMarkS-2+ CDS 14460 14864 . + 0 ID=cds-WP_081058714.1;Parent=gene-LDO49_RS12765;Dbxref=GenBank:WP_081058714.1;Name=WP_081058714.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS12765;product=hypothetical protein;protein_id=WP_081058714.1;transl_table=11 NZ_CAJZAV010000085.1 RefSeq gene 15043 15285 . - . ID=gene-LDO49_RS12770;Name=LDO49_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12770;old_locus_tag=BCEP4_1750017 NZ_CAJZAV010000085.1 Protein Homology CDS 15043 15285 . - 0 ID=cds-WP_021161537.1;Parent=gene-LDO49_RS12770;Dbxref=GenBank:WP_021161537.1;Name=WP_021161537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372628.1;locus_tag=LDO49_RS12770;product=DUF6566 family protein;protein_id=WP_021161537.1;transl_table=11 NZ_CAJZAV010000085.1 RefSeq pseudogene 15477 16230 . + . ID=gene-LDO49_RS12775;Name=LDO49_RS12775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS12775;old_locus_tag=BCEP4_1750018;pseudo=true NZ_CAJZAV010000085.1 Protein Homology CDS 15477 16230 . + 0 ID=cds-LDO49_RS12775;Parent=gene-LDO49_RS12775;Note=frameshifted;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545531.1;locus_tag=LDO49_RS12775;product=MgtC/SapB family protein;pseudo=true;transl_table=11 NZ_CAJZAV010000085.1 RefSeq gene 16227 16565 . + . ID=gene-LDO49_RS12780;Name=LDO49_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12780 NZ_CAJZAV010000085.1 GeneMarkS-2+ CDS 16227 16565 . + 0 ID=cds-WP_224051831.1;Parent=gene-LDO49_RS12780;Dbxref=GenBank:WP_224051831.1;Name=WP_224051831.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS12780;product=hypothetical protein;protein_id=WP_224051831.1;transl_table=11 NZ_CAJZAV010000085.1 RefSeq pseudogene 16596 16918 . + . ID=gene-LDO49_RS37510;Name=LDO49_RS37510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37510;partial=true;pseudo=true;start_range=.,16596 NZ_CAJZAV010000085.1 Protein Homology CDS 16596 16918 . + 0 ID=cds-LDO49_RS37510;Parent=gene-LDO49_RS37510;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853358.1;locus_tag=LDO49_RS37510;partial=true;product=endonuclease/exonuclease/phosphatase family protein;pseudo=true;start_range=.,16596;transl_table=11 NZ_CAJZAV010000085.1 RefSeq gene 16822 17310 . + . ID=gene-LDO49_RS12790;Name=LDO49_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12790;old_locus_tag=BCEP4_1750019 NZ_CAJZAV010000085.1 Protein Homology CDS 16822 17310 . + 0 ID=cds-WP_060147876.1;Parent=gene-LDO49_RS12790;Dbxref=GenBank:WP_060147876.1;Name=WP_060147876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217901.1;locus_tag=LDO49_RS12790;product=phage protein NinX family protein;protein_id=WP_060147876.1;transl_table=11 NZ_CAJZAV010000085.1 RefSeq pseudogene 17465 18117 . + . ID=gene-LDO49_RS12795;Name=LDO49_RS12795;end_range=18117,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS12795;partial=true;pseudo=true NZ_CAJZAV010000085.1 Protein Homology CDS 17465 18117 . + 0 ID=cds-LDO49_RS12795;Parent=gene-LDO49_RS12795;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=18117,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498311.1;locus_tag=LDO49_RS12795;partial=true;product=DUF3416 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000086.1 1 19352 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000086.1 RefSeq region 1 19352 . + . ID=NZ_CAJZAV010000086.1:1..19352;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_176 NZ_CAJZAV010000086.1 RefSeq gene 1 657 . + . ID=gene-LDO49_RS12800;Name=LDO49_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12800;old_locus_tag=BCEP4_1760001;partial=true;start_range=.,1 NZ_CAJZAV010000086.1 Protein Homology CDS 1 657 . + 0 ID=cds-WP_224051832.1;Parent=gene-LDO49_RS12800;Dbxref=GenBank:WP_224051832.1;Name=WP_224051832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412439.1;locus_tag=LDO49_RS12800;partial=true;product=ABC transporter substrate-binding protein;protein_id=WP_224051832.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000086.1 RefSeq pseudogene 949 1218 . + . ID=gene-LDO49_RS12805;Name=LDO49_RS12805;end_range=1218,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS12805;old_locus_tag=BCEP4_1760002;partial=true;pseudo=true NZ_CAJZAV010000086.1 Protein Homology CDS 949 1218 . + 0 ID=cds-LDO49_RS12805;Parent=gene-LDO49_RS12805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1218,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760803.1;locus_tag=LDO49_RS12805;partial=true;product=glycosyltransferase;pseudo=true;transl_table=11 NZ_CAJZAV010000086.1 RefSeq gene 1762 2829 . + . ID=gene-LDO49_RS12810;Name=LDO49_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12810;old_locus_tag=BCEP4_1760003 NZ_CAJZAV010000086.1 Protein Homology CDS 1762 2829 . + 0 ID=cds-WP_060072330.1;Parent=gene-LDO49_RS12810;Dbxref=GenBank:WP_060072330.1;Name=WP_060072330.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217251.1;locus_tag=LDO49_RS12810;product=ABC transporter substrate-binding protein;protein_id=WP_060072330.1;transl_table=11 NZ_CAJZAV010000086.1 RefSeq gene 2844 7265 . + . ID=gene-LDO49_RS12815;Name=LDO49_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12815;old_locus_tag=BCEP4_1760004 NZ_CAJZAV010000086.1 Protein Homology CDS 2844 7265 . + 0 ID=cds-WP_224051833.1;Parent=gene-LDO49_RS12815;Dbxref=GenBank:WP_224051833.1;Name=WP_224051833.1;Ontology_term=GO:0009306,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212902.1;locus_tag=LDO49_RS12815;product=translocation/assembly module TamB domain-containing protein;protein_id=WP_224051833.1;transl_table=11 NZ_CAJZAV010000086.1 RefSeq gene 7334 9487 . - . ID=gene-LDO49_RS12820;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=LDO49_RS12820;old_locus_tag=BCEP4_1760005 NZ_CAJZAV010000086.1 Protein Homology CDS 7334 9487 . - 0 ID=cds-WP_060069651.1;Parent=gene-LDO49_RS12820;Dbxref=GenBank:WP_060069651.1;Name=WP_060069651.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657654.1;locus_tag=LDO49_RS12820;product=methionine--tRNA ligase;protein_id=WP_060069651.1;transl_table=11 NZ_CAJZAV010000086.1 RefSeq gene 9864 10508 . - . ID=gene-LDO49_RS12825;Name=LDO49_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12825;old_locus_tag=BCEP4_1760006 NZ_CAJZAV010000086.1 Protein Homology CDS 9864 10508 . - 0 ID=cds-WP_021163796.1;Parent=gene-LDO49_RS12825;Dbxref=GenBank:WP_021163796.1;Name=WP_021163796.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398612.1;locus_tag=LDO49_RS12825;product=OmpA family protein;protein_id=WP_021163796.1;transl_table=11 NZ_CAJZAV010000086.1 RefSeq gene 10857 11948 . + . ID=gene-LDO49_RS12830;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=LDO49_RS12830;old_locus_tag=BCEP4_1760007 NZ_CAJZAV010000086.1 Protein Homology CDS 10857 11948 . + 0 ID=cds-WP_060069649.1;Parent=gene-LDO49_RS12830;Dbxref=GenBank:WP_060069649.1;Name=WP_060069649.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600266.1;locus_tag=LDO49_RS12830;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_060069649.1;transl_table=11 NZ_CAJZAV010000086.1 RefSeq gene 12082 12618 . + . ID=gene-LDO49_RS12835;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=LDO49_RS12835;old_locus_tag=BCEP4_1760008 NZ_CAJZAV010000086.1 Protein Homology CDS 12082 12618 . + 0 ID=cds-WP_021163793.1;Parent=gene-LDO49_RS12835;Dbxref=GenBank:WP_021163793.1;Name=WP_021163793.1;gbkey=CDS;gene=sodC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493653.1;locus_tag=LDO49_RS12835;product=superoxide dismutase [Cu-Zn];protein_id=WP_021163793.1;transl_table=11 NZ_CAJZAV010000086.1 RefSeq gene 12731 13300 . + . ID=gene-LDO49_RS12840;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=LDO49_RS12840;old_locus_tag=BCEP4_1760009 NZ_CAJZAV010000086.1 Protein Homology CDS 12731 13300 . + 0 ID=cds-WP_006398615.1;Parent=gene-LDO49_RS12840;Dbxref=GenBank:WP_006398615.1;Name=WP_006398615.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398615.1;locus_tag=LDO49_RS12840;product=dCTP deaminase;protein_id=WP_006398615.1;transl_table=11 NZ_CAJZAV010000086.1 RefSeq gene 13382 15661 . + . ID=gene-LDO49_RS12845;Name=LDO49_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12845;old_locus_tag=BCEP4_1760010 NZ_CAJZAV010000086.1 Protein Homology CDS 13382 15661 . + 0 ID=cds-WP_021163792.1;Parent=gene-LDO49_RS12845;Dbxref=GenBank:WP_021163792.1;Name=WP_021163792.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491304.1;locus_tag=LDO49_RS12845;product=arginine/lysine/ornithine decarboxylase;protein_id=WP_021163792.1;transl_table=11 NZ_CAJZAV010000086.1 RefSeq gene 15688 16488 . + . ID=gene-LDO49_RS12850;Name=LDO49_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12850;old_locus_tag=BCEP4_1760011 NZ_CAJZAV010000086.1 Protein Homology CDS 15688 16488 . + 0 ID=cds-WP_372585839.1;Parent=gene-LDO49_RS12850;Dbxref=GenBank:WP_372585839.1;Name=WP_372585839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723459.1;locus_tag=LDO49_RS12850;product=lysozyme inhibitor LprI family protein;protein_id=WP_372585839.1;transl_table=11 NZ_CAJZAV010000086.1 RefSeq gene 16570 17253 . - . ID=gene-LDO49_RS12855;Name=LDO49_RS12855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12855;old_locus_tag=BCEP4_1760012 NZ_CAJZAV010000086.1 Protein Homology CDS 16570 17253 . - 0 ID=cds-WP_059618859.1;Parent=gene-LDO49_RS12855;Dbxref=GenBank:WP_059618859.1;Name=WP_059618859.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497173.1;locus_tag=LDO49_RS12855;product=HAD family hydrolase;protein_id=WP_059618859.1;transl_table=11 NZ_CAJZAV010000086.1 RefSeq gene 17348 18757 . - . ID=gene-LDO49_RS12860;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=LDO49_RS12860;old_locus_tag=BCEP4_1760013 NZ_CAJZAV010000086.1 Protein Homology CDS 17348 18757 . - 0 ID=cds-WP_027786739.1;Parent=gene-LDO49_RS12860;Dbxref=GenBank:WP_027786739.1;Name=WP_027786739.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762488.1;locus_tag=LDO49_RS12860;product=argininosuccinate lyase;protein_id=WP_027786739.1;transl_table=11 NZ_CAJZAV010000086.1 RefSeq gene 18896 19352 . - . ID=gene-LDO49_RS12865;Name=LDO49_RS12865;end_range=19352,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12865;old_locus_tag=BCEP4_1760014;partial=true NZ_CAJZAV010000086.1 Protein Homology CDS 18896 19352 . - 1 ID=cds-WP_443797950.1;Parent=gene-LDO49_RS12865;Dbxref=GenBank:WP_443797950.1;Name=WP_443797950.1;end_range=19352,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492931.1;locus_tag=LDO49_RS12865;partial=true;product=MmyB family transcriptional regulator;protein_id=WP_443797950.1;transl_table=11 ##sequence-region NZ_CAJZAV010000087.1 1 18156 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000087.1 RefSeq region 1 18156 . + . ID=NZ_CAJZAV010000087.1:1..18156;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_177 NZ_CAJZAV010000087.1 RefSeq gene 1 879 . + . ID=gene-LDO49_RS12870;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=LDO49_RS12870;old_locus_tag=BCEP4_1770001;partial=true;start_range=.,1 NZ_CAJZAV010000087.1 Protein Homology CDS 1 879 . + 0 ID=cds-WP_224051837.1;Parent=gene-LDO49_RS12870;Dbxref=GenBank:WP_224051837.1;Name=WP_224051837.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355192.1;locus_tag=LDO49_RS12870;partial=true;product=type VI secretion system protein TssA;protein_id=WP_224051837.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000087.1 RefSeq gene 953 1507 . + . ID=gene-LDO49_RS12875;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=LDO49_RS12875;old_locus_tag=BCEP4_1770002 NZ_CAJZAV010000087.1 Protein Homology CDS 953 1507 . + 0 ID=cds-WP_048024666.1;Parent=gene-LDO49_RS12875;Dbxref=GenBank:WP_048024666.1;Name=WP_048024666.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355191.1;locus_tag=LDO49_RS12875;product=type VI secretion system contractile sheath small subunit;protein_id=WP_048024666.1;transl_table=11 NZ_CAJZAV010000087.1 RefSeq gene 1500 3008 . + . ID=gene-LDO49_RS12880;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=LDO49_RS12880;old_locus_tag=BCEP4_1770003 NZ_CAJZAV010000087.1 Protein Homology CDS 1500 3008 . + 0 ID=cds-WP_048024664.1;Parent=gene-LDO49_RS12880;Dbxref=GenBank:WP_048024664.1;Name=WP_048024664.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355190.1;locus_tag=LDO49_RS12880;product=type VI secretion system contractile sheath large subunit;protein_id=WP_048024664.1;transl_table=11 NZ_CAJZAV010000087.1 RefSeq gene 3080 3571 . + . ID=gene-LDO49_RS12885;Name=LDO49_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12885;old_locus_tag=BCEP4_1770004 NZ_CAJZAV010000087.1 Protein Homology CDS 3080 3571 . + 0 ID=cds-WP_027791618.1;Parent=gene-LDO49_RS12885;Dbxref=GenBank:WP_027791618.1;Name=WP_027791618.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329316.1;locus_tag=LDO49_RS12885;product=Hcp family type VI secretion system effector;protein_id=WP_027791618.1;transl_table=11 NZ_CAJZAV010000087.1 RefSeq gene 3588 4136 . + . ID=gene-LDO49_RS12890;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=LDO49_RS12890;old_locus_tag=BCEP4_1770005 NZ_CAJZAV010000087.1 Protein Homology CDS 3588 4136 . + 0 ID=cds-WP_224051839.1;Parent=gene-LDO49_RS12890;Dbxref=GenBank:WP_224051839.1;Name=WP_224051839.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355188.1;locus_tag=LDO49_RS12890;product=type VI secretion system baseplate subunit TssE;protein_id=WP_224051839.1;transl_table=11 NZ_CAJZAV010000087.1 RefSeq gene 4141 6012 . + . ID=gene-LDO49_RS12895;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LDO49_RS12895;old_locus_tag=BCEP4_1770006 NZ_CAJZAV010000087.1 Protein Homology CDS 4141 6012 . + 0 ID=cds-WP_224051840.1;Parent=gene-LDO49_RS12895;Dbxref=GenBank:WP_224051840.1;Name=WP_224051840.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190509.1;locus_tag=LDO49_RS12895;product=type VI secretion system baseplate subunit TssF;protein_id=WP_224051840.1;transl_table=11 NZ_CAJZAV010000087.1 RefSeq gene 6009 7103 . + . ID=gene-LDO49_RS12900;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LDO49_RS12900;old_locus_tag=BCEP4_1770007 NZ_CAJZAV010000087.1 Protein Homology CDS 6009 7103 . + 0 ID=cds-WP_372585840.1;Parent=gene-LDO49_RS12900;Dbxref=GenBank:WP_372585840.1;Name=WP_372585840.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011400852.1;locus_tag=LDO49_RS12900;product=type VI secretion system baseplate subunit TssG;protein_id=WP_372585840.1;transl_table=11 NZ_CAJZAV010000087.1 RefSeq gene 7116 9776 . + . ID=gene-LDO49_RS12905;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=LDO49_RS12905;old_locus_tag=BCEP4_1770008 NZ_CAJZAV010000087.1 Protein Homology CDS 7116 9776 . + 0 ID=cds-WP_224051844.1;Parent=gene-LDO49_RS12905;Dbxref=GenBank:WP_224051844.1;Name=WP_224051844.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853851.1;locus_tag=LDO49_RS12905;product=type VI secretion system ATPase TssH;protein_id=WP_224051844.1;transl_table=11 NZ_CAJZAV010000087.1 RefSeq gene 9773 11977 . + . ID=gene-LDO49_RS12910;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=LDO49_RS12910;old_locus_tag=BCEP4_1770009 NZ_CAJZAV010000087.1 Protein Homology CDS 9773 11977 . + 0 ID=cds-WP_224051845.1;Parent=gene-LDO49_RS12910;Dbxref=GenBank:WP_224051845.1;Name=WP_224051845.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssI;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853850.1;locus_tag=LDO49_RS12910;product=type VI secretion system Vgr family protein;protein_id=WP_224051845.1;transl_table=11 NZ_CAJZAV010000087.1 RefSeq gene 11993 13258 . + . ID=gene-LDO49_RS12915;Name=LDO49_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12915;old_locus_tag=BCEP4_1770010 NZ_CAJZAV010000087.1 Protein Homology CDS 11993 13258 . + 0 ID=cds-WP_224051846.1;Parent=gene-LDO49_RS12915;Dbxref=GenBank:WP_224051846.1;Name=WP_224051846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553667.1;locus_tag=LDO49_RS12915;product=hypothetical protein;protein_id=WP_224051846.1;transl_table=11 NZ_CAJZAV010000087.1 RefSeq gene 13271 17911 . + . ID=gene-LDO49_RS12920;Name=LDO49_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12920;old_locus_tag=BCEP4_1770011 NZ_CAJZAV010000087.1 Protein Homology CDS 13271 17911 . + 0 ID=cds-WP_224051847.1;Parent=gene-LDO49_RS12920;Dbxref=GenBank:WP_224051847.1;Name=WP_224051847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089001.1;locus_tag=LDO49_RS12920;product=RHS repeat-associated core domain-containing protein;protein_id=WP_224051847.1;transl_table=11 NZ_CAJZAV010000087.1 RefSeq gene 18067 18156 . - . ID=gene-LDO49_RS12925;Name=LDO49_RS12925;end_range=18156,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12925;partial=true NZ_CAJZAV010000087.1 Protein Homology CDS 18067 18156 . - 0 ID=cds-WP_224051848.1;Parent=gene-LDO49_RS12925;Dbxref=GenBank:WP_224051848.1;Name=WP_224051848.1;Ontology_term=GO:0015074;end_range=18156,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010972061.1;locus_tag=LDO49_RS12925;partial=true;product=IS3 family transposase;protein_id=WP_224051848.1;transl_table=11 ##sequence-region NZ_CAJZAV010000088.1 1 2826 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000088.1 RefSeq region 1 2826 . + . ID=NZ_CAJZAV010000088.1:1..2826;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_178 NZ_CAJZAV010000088.1 RefSeq gene 1 1238 . + . ID=gene-LDO49_RS12930;Name=LDO49_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12930;old_locus_tag=BCEP4_1780001;partial=true;start_range=.,1 NZ_CAJZAV010000088.1 Protein Homology CDS 1 1238 . + 2 ID=cds-WP_224051849.1;Parent=gene-LDO49_RS12930;Dbxref=GenBank:WP_224051849.1;Name=WP_224051849.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895927.1;locus_tag=LDO49_RS12930;partial=true;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_224051849.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000088.1 RefSeq gene 1268 2476 . + . ID=gene-LDO49_RS12935;Name=LDO49_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12935;old_locus_tag=BCEP4_1780002 NZ_CAJZAV010000088.1 Protein Homology CDS 1268 2476 . + 0 ID=cds-WP_060070135.1;Parent=gene-LDO49_RS12935;Dbxref=GenBank:WP_060070135.1;Name=WP_060070135.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851010.1;locus_tag=LDO49_RS12935;product=acyl-CoA dehydrogenase family protein;protein_id=WP_060070135.1;transl_table=11 NZ_CAJZAV010000088.1 RefSeq gene 2491 2826 . + . ID=gene-LDO49_RS12940;Name=LDO49_RS12940;end_range=2826,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12940;partial=true NZ_CAJZAV010000088.1 Protein Homology CDS 2491 2826 . + 0 ID=cds-WP_224051850.1;Parent=gene-LDO49_RS12940;Dbxref=GenBank:WP_224051850.1;Name=WP_224051850.1;Ontology_term=GO:0016627,GO:0050660;end_range=2826,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364788.1;locus_tag=LDO49_RS12940;partial=true;product=acyl-CoA dehydrogenase family protein;protein_id=WP_224051850.1;transl_table=11 ##sequence-region NZ_CAJZAV010000089.1 1 26297 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000089.1 RefSeq region 1 26297 . + . ID=NZ_CAJZAV010000089.1:1..26297;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_179 NZ_CAJZAV010000089.1 RefSeq pseudogene 1 153 . + . ID=gene-LDO49_RS38020;Name=LDO49_RS38020;end_range=153,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38020;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000089.1 Protein Homology CDS 1 153 . + 0 ID=cds-LDO49_RS38020;Parent=gene-LDO49_RS38020;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=153,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917772.1;locus_tag=LDO49_RS38020;partial=true;product=branched-chain alpha-keto acid dehydrogenase subunit E2;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 164 656 . + . ID=gene-LDO49_RS12945;Name=LDO49_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12945;old_locus_tag=BCEP4_1790001;partial=true;start_range=.,164 NZ_CAJZAV010000089.1 Protein Homology CDS 164 656 . + 1 ID=cds-WP_443797951.1;Parent=gene-LDO49_RS12945;Dbxref=GenBank:WP_443797951.1;Name=WP_443797951.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917772.1;locus_tag=LDO49_RS12945;partial=true;product=2-oxo acid dehydrogenase subunit E2;protein_id=WP_443797951.1;start_range=.,164;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 942 2708 . + . ID=gene-LDO49_RS12950;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LDO49_RS12950;old_locus_tag=BCEP4_1790002 NZ_CAJZAV010000089.1 Protein Homology CDS 942 2708 . + 0 ID=cds-WP_059621474.1;Parent=gene-LDO49_RS12950;Dbxref=GenBank:WP_059621474.1;Name=WP_059621474.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213072.1;locus_tag=LDO49_RS12950;product=dihydrolipoyl dehydrogenase;protein_id=WP_059621474.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 2907 3473 . - . ID=gene-LDO49_RS12955;Name=LDO49_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12955;old_locus_tag=BCEP4_1790003 NZ_CAJZAV010000089.1 Protein Homology CDS 2907 3473 . - 0 ID=cds-WP_006481973.1;Parent=gene-LDO49_RS12955;Dbxref=GenBank:WP_006481973.1;Name=WP_006481973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331817.1;locus_tag=LDO49_RS12955;product=phasin family protein;protein_id=WP_006481973.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 4127 5296 . + . ID=gene-LDO49_RS12960;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=LDO49_RS12960;old_locus_tag=BCEP4_1790005 NZ_CAJZAV010000089.1 Protein Homology CDS 4127 5296 . + 0 ID=cds-WP_021157665.1;Parent=gene-LDO49_RS12960;Dbxref=GenBank:WP_021157665.1;Name=WP_021157665.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401961.1;locus_tag=LDO49_RS12960;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_021157665.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 5390 6199 . - . ID=gene-LDO49_RS12965;Name=LDO49_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12965;old_locus_tag=BCEP4_1790006 NZ_CAJZAV010000089.1 Protein Homology CDS 5390 6199 . - 0 ID=cds-WP_027786965.1;Parent=gene-LDO49_RS12965;Dbxref=GenBank:WP_027786965.1;Name=WP_027786965.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524720.1;locus_tag=LDO49_RS12965;product=IclR family transcriptional regulator;protein_id=WP_027786965.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 6383 7105 . + . ID=gene-LDO49_RS12970;Name=LDO49_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12970;old_locus_tag=BCEP4_1790007 NZ_CAJZAV010000089.1 Protein Homology CDS 6383 7105 . + 0 ID=cds-WP_060074620.1;Parent=gene-LDO49_RS12970;Dbxref=GenBank:WP_060074620.1;Name=WP_060074620.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549455.1;locus_tag=LDO49_RS12970;product=(Fe-S)-binding protein;protein_id=WP_060074620.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 7140 8549 . + . ID=gene-LDO49_RS12975;Name=LDO49_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12975;old_locus_tag=BCEP4_1790008 NZ_CAJZAV010000089.1 Protein Homology CDS 7140 8549 . + 0 ID=cds-WP_021157668.1;Parent=gene-LDO49_RS12975;Dbxref=GenBank:WP_021157668.1;Name=WP_021157668.1;Ontology_term=GO:0046872,GO:0051539;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408173.1;locus_tag=LDO49_RS12975;product=lactate utilization protein B;protein_id=WP_021157668.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 8679 8906 . + . ID=gene-LDO49_RS12980;Name=LDO49_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12980;old_locus_tag=BCEP4_1790009 NZ_CAJZAV010000089.1 Protein Homology CDS 8679 8906 . + 0 ID=cds-WP_027786967.1;Parent=gene-LDO49_RS12980;Dbxref=GenBank:WP_027786967.1;Name=WP_027786967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478387.1;locus_tag=LDO49_RS12980;product=hypothetical protein;protein_id=WP_027786967.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 9008 9490 . + . ID=gene-LDO49_RS12985;Name=LDO49_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12985;old_locus_tag=BCEP4_1790010 NZ_CAJZAV010000089.1 Protein Homology CDS 9008 9490 . + 0 ID=cds-WP_048024076.1;Parent=gene-LDO49_RS12985;Dbxref=GenBank:WP_048024076.1;Name=WP_048024076.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478388.1;locus_tag=LDO49_RS12985;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_048024076.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 9605 10144 . + . ID=gene-LDO49_RS12990;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=LDO49_RS12990;old_locus_tag=BCEP4_1790011 NZ_CAJZAV010000089.1 Protein Homology CDS 9605 10144 . + 0 ID=cds-WP_009691731.1;Parent=gene-LDO49_RS12990;Dbxref=GenBank:WP_009691731.1;Name=WP_009691731.1;Ontology_term=GO:0006355,GO:0003690,GO:0003700;gbkey=CDS;gene=iscR;go_function=double-stranded DNA binding|0003690||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195928.1;locus_tag=LDO49_RS12990;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_009691731.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 10210 11433 . + . ID=gene-LDO49_RS12995;Name=LDO49_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS12995;old_locus_tag=BCEP4_1790012 NZ_CAJZAV010000089.1 Protein Homology CDS 10210 11433 . + 0 ID=cds-WP_021157672.1;Parent=gene-LDO49_RS12995;Dbxref=GenBank:WP_021157672.1;Name=WP_021157672.1;Ontology_term=GO:0044571,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=[2Fe-2S] cluster assembly|0044571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698736.1;locus_tag=LDO49_RS12995;product=IscS subfamily cysteine desulfurase;protein_id=WP_021157672.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 11502 11909 . + . ID=gene-LDO49_RS13000;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=LDO49_RS13000;old_locus_tag=BCEP4_1790013 NZ_CAJZAV010000089.1 Protein Homology CDS 11502 11909 . + 0 ID=cds-WP_006481982.1;Parent=gene-LDO49_RS13000;Dbxref=GenBank:WP_006481982.1;Name=WP_006481982.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533937.1;locus_tag=LDO49_RS13000;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_006481982.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 11975 12298 . + . ID=gene-LDO49_RS13005;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=LDO49_RS13005;old_locus_tag=BCEP4_1790014 NZ_CAJZAV010000089.1 Protein Homology CDS 11975 12298 . + 0 ID=cds-WP_012492710.1;Parent=gene-LDO49_RS13005;Dbxref=GenBank:WP_012492710.1;Name=WP_012492710.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=iscA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018417526.1;locus_tag=LDO49_RS13005;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_012492710.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 12393 12920 . + . ID=gene-LDO49_RS13010;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=LDO49_RS13010;old_locus_tag=BCEP4_1790015 NZ_CAJZAV010000089.1 Protein Homology CDS 12393 12920 . + 0 ID=cds-WP_039364764.1;Parent=gene-LDO49_RS13010;Dbxref=GenBank:WP_039364764.1;Name=WP_039364764.1;Ontology_term=GO:0051259,GO:0051604,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein complex oligomerization|0051259||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091954.1;locus_tag=LDO49_RS13010;product=Fe-S protein assembly co-chaperone HscB;protein_id=WP_039364764.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 12975 14843 . + . ID=gene-LDO49_RS13015;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=LDO49_RS13015;old_locus_tag=BCEP4_1790016 NZ_CAJZAV010000089.1 Protein Homology CDS 12975 14843 . + 0 ID=cds-WP_021157675.1;Parent=gene-LDO49_RS13015;Dbxref=GenBank:WP_021157675.1;Name=WP_021157675.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876413.1;locus_tag=LDO49_RS13015;product=Fe-S protein assembly chaperone HscA;protein_id=WP_021157675.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 14932 15273 . + . ID=gene-LDO49_RS13020;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=LDO49_RS13020;old_locus_tag=BCEP4_1790017 NZ_CAJZAV010000089.1 Protein Homology CDS 14932 15273 . + 0 ID=cds-WP_011352558.1;Parent=gene-LDO49_RS13020;Dbxref=GenBank:WP_011352558.1;Name=WP_011352558.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193872.1;locus_tag=LDO49_RS13020;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_011352558.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 15293 15502 . + . ID=gene-LDO49_RS13025;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=LDO49_RS13025;old_locus_tag=BCEP4_1790018 NZ_CAJZAV010000089.1 Protein Homology CDS 15293 15502 . + 0 ID=cds-WP_021157676.1;Parent=gene-LDO49_RS13025;Dbxref=GenBank:WP_021157676.1;Name=WP_021157676.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601144.1;locus_tag=LDO49_RS13025;product=Fe-S cluster assembly protein IscX;protein_id=WP_021157676.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 15642 16385 . - . ID=gene-LDO49_RS13030;Name=LDO49_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13030;old_locus_tag=BCEP4_1790019 NZ_CAJZAV010000089.1 Protein Homology CDS 15642 16385 . - 0 ID=cds-WP_060074619.1;Parent=gene-LDO49_RS13030;Dbxref=GenBank:WP_060074619.1;Name=WP_060074619.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409697.1;locus_tag=LDO49_RS13030;product=glycine zipper 2TM domain-containing protein;protein_id=WP_060074619.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 16734 18260 . - . ID=gene-LDO49_RS13035;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=LDO49_RS13035;old_locus_tag=BCEP4_1790020 NZ_CAJZAV010000089.1 Protein Homology CDS 16734 18260 . - 0 ID=cds-WP_021157678.1;Parent=gene-LDO49_RS13035;Dbxref=GenBank:WP_021157678.1;Name=WP_021157678.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091959.1;locus_tag=LDO49_RS13035;product=lysine--tRNA ligase;protein_id=WP_021157678.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 18345 19449 . - . ID=gene-LDO49_RS13040;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=LDO49_RS13040;old_locus_tag=BCEP4_1790021 NZ_CAJZAV010000089.1 Protein Homology CDS 19369 19449 . - 0 ID=cds-WP_099318679.1;Parent=gene-LDO49_RS13040;Dbxref=GenBank:WP_099318679.1;Name=WP_099318679.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998981.1;locus_tag=LDO49_RS13040;product=peptide chain release factor 2;protein_id=WP_099318679.1;transl_table=11 NZ_CAJZAV010000089.1 Protein Homology CDS 18345 19367 . - 0 ID=cds-WP_099318679.1;Parent=gene-LDO49_RS13040;Dbxref=GenBank:WP_099318679.1;Name=WP_099318679.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998981.1;locus_tag=LDO49_RS13040;product=peptide chain release factor 2;protein_id=WP_099318679.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 19602 21299 . - . ID=gene-LDO49_RS13045;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=LDO49_RS13045;old_locus_tag=BCEP4_1790022 NZ_CAJZAV010000089.1 Protein Homology CDS 19602 21299 . - 0 ID=cds-WP_021157680.1;Parent=gene-LDO49_RS13045;Dbxref=GenBank:WP_021157680.1;Name=WP_021157680.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352553.1;locus_tag=LDO49_RS13045;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_021157680.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 21317 22381 . - . ID=gene-LDO49_RS13050;Name=LDO49_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13050;old_locus_tag=BCEP4_1790023 NZ_CAJZAV010000089.1 Protein Homology CDS 21317 22381 . - 0 ID=cds-WP_124475798.1;Parent=gene-LDO49_RS13050;Dbxref=GenBank:WP_124475798.1;Name=WP_124475798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025965.1;locus_tag=LDO49_RS13050;product=regulator;protein_id=WP_124475798.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 22544 23797 . + . ID=gene-LDO49_RS13055;Name=LDO49_RS13055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13055;old_locus_tag=BCEP4_1790024 NZ_CAJZAV010000089.1 Protein Homology CDS 22544 23797 . + 0 ID=cds-WP_021157682.1;Parent=gene-LDO49_RS13055;Dbxref=GenBank:WP_021157682.1;Name=WP_021157682.1;Ontology_term=GO:0042953,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532144.1;locus_tag=LDO49_RS13055;product=lipoprotein-releasing ABC transporter permease subunit;protein_id=WP_021157682.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 23790 24548 . + . ID=gene-LDO49_RS13060;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=LDO49_RS13060;old_locus_tag=BCEP4_1790025 NZ_CAJZAV010000089.1 Protein Homology CDS 23790 24548 . + 0 ID=cds-WP_021157683.1;Parent=gene-LDO49_RS13060;Dbxref=GenBank:WP_021157683.1;Name=WP_021157683.1;Ontology_term=GO:0042953,GO:0005524,GO:0043190;gbkey=CDS;gene=lolD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195923.1;locus_tag=LDO49_RS13060;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_021157683.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 24612 25400 . + . ID=gene-LDO49_RS13065;Name=LDO49_RS13065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13065;old_locus_tag=BCEP4_1790026 NZ_CAJZAV010000089.1 Protein Homology CDS 24612 25400 . + 0 ID=cds-WP_048024070.1;Parent=gene-LDO49_RS13065;Dbxref=GenBank:WP_048024070.1;Name=WP_048024070.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213084.1;locus_tag=LDO49_RS13065;product=TatD family hydrolase;protein_id=WP_048024070.1;transl_table=11 NZ_CAJZAV010000089.1 RefSeq gene 25458 26297 . + . ID=gene-LDO49_RS13070;Name=LDO49_RS13070;end_range=26297,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13070;partial=true NZ_CAJZAV010000089.1 Protein Homology CDS 25458 26297 . + 0 ID=cds-WP_224051852.1;Parent=gene-LDO49_RS13070;Dbxref=GenBank:WP_224051852.1;Name=WP_224051852.1;Ontology_term=GO:0030420,GO:0016020;end_range=26297,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657365.1;locus_tag=LDO49_RS13070;partial=true;product=ComEC/Rec2 family competence protein;protein_id=WP_224051852.1;transl_table=11 ##sequence-region NZ_CAJZAV010000090.1 1 48174 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000090.1 RefSeq region 1 48174 . + . ID=NZ_CAJZAV010000090.1:1..48174;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_18 NZ_CAJZAV010000090.1 RefSeq pseudogene 1 486 . - . ID=gene-LDO49_RS13075;Name=LDO49_RS13075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS13075;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000090.1 Protein Homology CDS 1 486 . - 0 ID=cds-LDO49_RS13075;Parent=gene-LDO49_RS13075;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479053.1;locus_tag=LDO49_RS13075;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 809 1279 . + . ID=gene-LDO49_RS13080;Name=LDO49_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13080;old_locus_tag=BCEP4_180003 NZ_CAJZAV010000090.1 Protein Homology CDS 809 1279 . + 0 ID=cds-WP_021159153.1;Parent=gene-LDO49_RS13080;Dbxref=GenBank:WP_021159153.1;Name=WP_021159153.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491557.1;locus_tag=LDO49_RS13080;product=universal stress protein;protein_id=WP_021159153.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 1653 2159 . + . ID=gene-LDO49_RS13085;Name=LDO49_RS13085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13085;old_locus_tag=BCEP4_180004 NZ_CAJZAV010000090.1 Protein Homology CDS 1653 2159 . + 0 ID=cds-WP_048023031.1;Parent=gene-LDO49_RS13085;Dbxref=GenBank:WP_048023031.1;Name=WP_048023031.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366041.1;locus_tag=LDO49_RS13085;product=cupin domain-containing protein;protein_id=WP_048023031.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 2345 3370 . + . ID=gene-LDO49_RS13090;Name=LDO49_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13090;old_locus_tag=BCEP4_180005 NZ_CAJZAV010000090.1 Protein Homology CDS 2345 3370 . + 0 ID=cds-WP_021159151.1;Parent=gene-LDO49_RS13090;Dbxref=GenBank:WP_021159151.1;Name=WP_021159151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340050.1;locus_tag=LDO49_RS13090;product=DedA family protein/thiosulfate sulfurtransferase GlpE;protein_id=WP_021159151.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 3914 6766 . + . ID=gene-LDO49_RS13095;Name=LDO49_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13095;old_locus_tag=BCEP4_180007 NZ_CAJZAV010000090.1 Protein Homology CDS 3914 6766 . + 0 ID=cds-WP_060071795.1;Parent=gene-LDO49_RS13095;Dbxref=GenBank:WP_060071795.1;Name=WP_060071795.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009982250.1;locus_tag=LDO49_RS13095;product=type VI secretion system Vgr family protein;protein_id=WP_060071795.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 6792 8057 . + . ID=gene-LDO49_RS13100;Name=LDO49_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13100;old_locus_tag=BCEP4_180008 NZ_CAJZAV010000090.1 Protein Homology CDS 6792 8057 . + 0 ID=cds-WP_060071797.1;Parent=gene-LDO49_RS13100;Dbxref=GenBank:WP_060071797.1;Name=WP_060071797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761091.1;locus_tag=LDO49_RS13100;product=VRR-NUC domain-containing protein;protein_id=WP_060071797.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 8096 9439 . + . ID=gene-LDO49_RS13105;Name=LDO49_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13105;old_locus_tag=BCEP4_180009 NZ_CAJZAV010000090.1 Protein Homology CDS 8096 9439 . + 0 ID=cds-WP_081067226.1;Parent=gene-LDO49_RS13105;Dbxref=GenBank:WP_081067226.1;Name=WP_081067226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761092.1;locus_tag=LDO49_RS13105;product=type VI immunity family protein;protein_id=WP_081067226.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 9467 10036 . + . ID=gene-LDO49_RS13110;Name=LDO49_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13110 NZ_CAJZAV010000090.1 GeneMarkS-2+ CDS 9467 10036 . + 0 ID=cds-WP_124474720.1;Parent=gene-LDO49_RS13110;Dbxref=GenBank:WP_124474720.1;Name=WP_124474720.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS13110;product=hypothetical protein;protein_id=WP_124474720.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 10193 10519 . + . ID=gene-LDO49_RS13115;Name=LDO49_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13115;old_locus_tag=BCEP4_180012 NZ_CAJZAV010000090.1 Protein Homology CDS 10193 10519 . + 0 ID=cds-WP_060071801.1;Parent=gene-LDO49_RS13115;Dbxref=GenBank:WP_060071801.1;Name=WP_060071801.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724501.1;locus_tag=LDO49_RS13115;product=PAAR domain-containing protein;protein_id=WP_060071801.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 10628 11272 . + . ID=gene-LDO49_RS37515;Name=LDO49_RS37515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37515;old_locus_tag=BCEP4_180013 NZ_CAJZAV010000090.1 Protein Homology CDS 10628 11272 . + 0 ID=cds-WP_185633895.1;Parent=gene-LDO49_RS37515;Dbxref=GenBank:WP_185633895.1;Name=WP_185633895.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF012792.6;locus_tag=LDO49_RS37515;product=GNAT family N-acetyltransferase;protein_id=WP_185633895.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 11753 13135 . + . ID=gene-LDO49_RS13125;Name=LDO49_RS13125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13125;old_locus_tag=BCEP4_180016 NZ_CAJZAV010000090.1 Protein Homology CDS 11753 13135 . + 0 ID=cds-WP_059814161.1;Parent=gene-LDO49_RS13125;Dbxref=GenBank:WP_059814161.1;Name=WP_059814161.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494879.1;locus_tag=LDO49_RS13125;product=amino acid permease;protein_id=WP_059814161.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 13345 14280 . + . ID=gene-LDO49_RS13130;Name=LDO49_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13130;old_locus_tag=BCEP4_180017 NZ_CAJZAV010000090.1 Protein Homology CDS 13345 14280 . + 0 ID=cds-WP_060071802.1;Parent=gene-LDO49_RS13130;Dbxref=GenBank:WP_060071802.1;Name=WP_060071802.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485822.1;locus_tag=LDO49_RS13130;product=universal stress protein;protein_id=WP_060071802.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq pseudogene 15016 15345 . - . ID=gene-LDO49_RS38025;Name=LDO49_RS38025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38025;old_locus_tag=BCEP4_180020;partial=true;pseudo=true;start_range=.,15016 NZ_CAJZAV010000090.1 Protein Homology CDS 15016 15345 . - 0 ID=cds-LDO49_RS38025;Parent=gene-LDO49_RS38025;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547723.1;locus_tag=LDO49_RS38025;partial=true;product=hypothetical protein;pseudo=true;start_range=.,15016;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 15899 16153 . + . ID=gene-LDO49_RS13135;Name=LDO49_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13135;old_locus_tag=BCEP4_180022 NZ_CAJZAV010000090.1 Protein Homology CDS 15899 16153 . + 0 ID=cds-WP_048023016.1;Parent=gene-LDO49_RS13135;Dbxref=GenBank:WP_048023016.1;Name=WP_048023016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491227.1;locus_tag=LDO49_RS13135;product=DUF3562 domain-containing protein;protein_id=WP_048023016.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 16499 18298 . + . ID=gene-LDO49_RS13140;Name=LDO49_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13140;old_locus_tag=BCEP4_180023 NZ_CAJZAV010000090.1 Protein Homology CDS 16499 18298 . + 0 ID=cds-WP_021162001.1;Parent=gene-LDO49_RS13140;Dbxref=GenBank:WP_021162001.1;Name=WP_021162001.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355245.1;locus_tag=LDO49_RS13140;product=methyl-accepting chemotaxis protein;protein_id=WP_021162001.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 18357 19394 . - . ID=gene-LDO49_RS13145;Name=LDO49_RS13145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13145;old_locus_tag=BCEP4_180024 NZ_CAJZAV010000090.1 Protein Homology CDS 18357 19394 . - 0 ID=cds-WP_048023164.1;Parent=gene-LDO49_RS13145;Dbxref=GenBank:WP_048023164.1;Name=WP_048023164.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547720.1;locus_tag=LDO49_RS13145;product=sigma-54 interaction domain-containing protein;protein_id=WP_048023164.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 19776 21767 . + . ID=gene-LDO49_RS13150;Name=LDO49_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13150;old_locus_tag=BCEP4_180025 NZ_CAJZAV010000090.1 Protein Homology CDS 19776 21767 . + 0 ID=cds-WP_224051854.1;Parent=gene-LDO49_RS13150;Dbxref=GenBank:WP_224051854.1;Name=WP_224051854.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355243.1;locus_tag=LDO49_RS13150;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_224051854.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 21801 22097 . + . ID=gene-LDO49_RS37525;Name=LDO49_RS37525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37525;old_locus_tag=BCEP4_180026 NZ_CAJZAV010000090.1 GeneMarkS-2+ CDS 21801 22097 . + 0 ID=cds-WP_224051856.1;Parent=gene-LDO49_RS37525;Dbxref=GenBank:WP_224051856.1;Name=WP_224051856.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37525;product=hypothetical protein;protein_id=WP_224051856.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 22147 22758 . + . ID=gene-LDO49_RS13160;Name=LDO49_RS13160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13160;old_locus_tag=BCEP4_180027 NZ_CAJZAV010000090.1 Protein Homology CDS 22147 22758 . + 0 ID=cds-WP_224051858.1;Parent=gene-LDO49_RS13160;Dbxref=GenBank:WP_224051858.1;Name=WP_224051858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355242.1;locus_tag=LDO49_RS13160;product=DUF4142 domain-containing protein;protein_id=WP_224051858.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 22780 23286 . - . ID=gene-LDO49_RS13165;Name=LDO49_RS13165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13165;old_locus_tag=BCEP4_180028 NZ_CAJZAV010000090.1 Protein Homology CDS 22780 23286 . - 0 ID=cds-WP_059492251.1;Parent=gene-LDO49_RS13165;Dbxref=GenBank:WP_059492251.1;Name=WP_059492251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882195.1;locus_tag=LDO49_RS13165;product=PRC-barrel domain-containing protein;protein_id=WP_059492251.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 23344 23775 . - . ID=gene-LDO49_RS13170;Name=LDO49_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13170;old_locus_tag=BCEP4_180029 NZ_CAJZAV010000090.1 Protein Homology CDS 23344 23775 . - 0 ID=cds-WP_021162006.1;Parent=gene-LDO49_RS13170;Dbxref=GenBank:WP_021162006.1;Name=WP_021162006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899408.1;locus_tag=LDO49_RS13170;product=CBS domain-containing protein;protein_id=WP_021162006.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 24139 24387 . - . ID=gene-LDO49_RS13175;Name=LDO49_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13175;old_locus_tag=BCEP4_180031 NZ_CAJZAV010000090.1 Protein Homology CDS 24139 24387 . - 0 ID=cds-WP_021162008.1;Parent=gene-LDO49_RS13175;Dbxref=GenBank:WP_021162008.1;Name=WP_021162008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479036.1;locus_tag=LDO49_RS13175;product=hypothetical protein;protein_id=WP_021162008.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 24543 24842 . + . ID=gene-LDO49_RS13180;Name=LDO49_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13180;old_locus_tag=BCEP4_180032 NZ_CAJZAV010000090.1 Protein Homology CDS 24543 24842 . + 0 ID=cds-WP_224051859.1;Parent=gene-LDO49_RS13180;Dbxref=GenBank:WP_224051859.1;Name=WP_224051859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467924.1;locus_tag=LDO49_RS13180;product=hypothetical protein;protein_id=WP_224051859.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 25149 25460 . + . ID=gene-LDO49_RS13185;Name=LDO49_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13185 NZ_CAJZAV010000090.1 Protein Homology CDS 25149 25460 . + 0 ID=cds-WP_042977308.1;Parent=gene-LDO49_RS13185;Dbxref=GenBank:WP_042977308.1;Name=WP_042977308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750981.1;locus_tag=LDO49_RS13185;product=hypothetical protein;protein_id=WP_042977308.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 25662 26543 . + . ID=gene-LDO49_RS13190;Name=LDO49_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13190;old_locus_tag=BCEP4_180035 NZ_CAJZAV010000090.1 Protein Homology CDS 25662 26543 . + 0 ID=cds-WP_021162747.1;Parent=gene-LDO49_RS13190;Dbxref=GenBank:WP_021162747.1;Name=WP_021162747.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491220.1;locus_tag=LDO49_RS13190;product=MipA/OmpV family protein;protein_id=WP_021162747.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 26640 28334 . + . ID=gene-LDO49_RS13195;Name=LDO49_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13195;old_locus_tag=BCEP4_180036 NZ_CAJZAV010000090.1 Protein Homology CDS 26640 28334 . + 0 ID=cds-WP_059814152.1;Parent=gene-LDO49_RS13195;Dbxref=GenBank:WP_059814152.1;Name=WP_059814152.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340033.1;locus_tag=LDO49_RS13195;product=VRR-NUC domain-containing protein;protein_id=WP_059814152.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 28331 30631 . + . ID=gene-LDO49_RS13200;Name=LDO49_RS13200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13200;old_locus_tag=BCEP4_180037 NZ_CAJZAV010000090.1 Protein Homology CDS 28331 30631 . + 0 ID=cds-WP_224051860.1;Parent=gene-LDO49_RS13200;Dbxref=GenBank:WP_224051860.1;Name=WP_224051860.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355233.1;locus_tag=LDO49_RS13200;product=ATP-dependent DNA helicase;protein_id=WP_224051860.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 30752 31438 . - . ID=gene-LDO49_RS13205;Name=LDO49_RS13205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13205;old_locus_tag=BCEP4_180038 NZ_CAJZAV010000090.1 Protein Homology CDS 30752 31438 . - 0 ID=cds-WP_060071821.1;Parent=gene-LDO49_RS13205;Dbxref=GenBank:WP_060071821.1;Name=WP_060071821.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329284.1;locus_tag=LDO49_RS13205;product=GntR family transcriptional regulator;protein_id=WP_060071821.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 31642 32973 . + . ID=gene-LDO49_RS13210;Name=LDO49_RS13210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13210;old_locus_tag=BCEP4_180039 NZ_CAJZAV010000090.1 Protein Homology CDS 31642 32973 . + 0 ID=cds-WP_060071824.1;Parent=gene-LDO49_RS13210;Dbxref=GenBank:WP_060071824.1;Name=WP_060071824.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329285.1;locus_tag=LDO49_RS13210;product=MFS transporter;protein_id=WP_060071824.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 32994 33737 . + . ID=gene-LDO49_RS13215;Name=LDO49_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13215;old_locus_tag=BCEP4_180040 NZ_CAJZAV010000090.1 Protein Homology CDS 32994 33737 . + 0 ID=cds-WP_060071826.1;Parent=gene-LDO49_RS13215;Dbxref=GenBank:WP_060071826.1;Name=WP_060071826.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329286.1;locus_tag=LDO49_RS13215;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_060071826.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 33734 35302 . + . ID=gene-LDO49_RS13220;Name=LDO49_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13220;old_locus_tag=BCEP4_180041 NZ_CAJZAV010000090.1 Protein Homology CDS 33734 35302 . + 0 ID=cds-WP_060071828.1;Parent=gene-LDO49_RS13220;Dbxref=GenBank:WP_060071828.1;Name=WP_060071828.1;Ontology_term=GO:0008410,GO:0016782;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018009106.1;locus_tag=LDO49_RS13220;product=acyl CoA:acetate/3-ketoacid CoA transferase;protein_id=WP_060071828.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 35363 36709 . + . ID=gene-LDO49_RS13225;Name=LDO49_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13225;old_locus_tag=BCEP4_180042 NZ_CAJZAV010000090.1 Protein Homology CDS 35363 36709 . + 0 ID=cds-WP_060071830.1;Parent=gene-LDO49_RS13225;Dbxref=GenBank:WP_060071830.1;Name=WP_060071830.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329288.1;locus_tag=LDO49_RS13225;product=FAD-dependent oxidoreductase;protein_id=WP_060071830.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 37048 37818 . - . ID=gene-LDO49_RS13230;Name=LDO49_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13230;old_locus_tag=BCEP4_180044 NZ_CAJZAV010000090.1 Protein Homology CDS 37048 37818 . - 0 ID=cds-WP_021162744.1;Parent=gene-LDO49_RS13230;Dbxref=GenBank:WP_021162744.1;Name=WP_021162744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899400.1;locus_tag=LDO49_RS13230;product=IclR family transcriptional regulator domain-containing protein;protein_id=WP_021162744.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 37732 38088 . + . ID=gene-LDO49_RS13235;Name=LDO49_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13235;old_locus_tag=BCEP4_180043 NZ_CAJZAV010000090.1 GeneMarkS-2+ CDS 37732 38088 . + 0 ID=cds-WP_185633899.1;Parent=gene-LDO49_RS13235;Dbxref=GenBank:WP_185633899.1;Name=WP_185633899.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS13235;product=hypothetical protein;protein_id=WP_185633899.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 38205 38816 . + . ID=gene-LDO49_RS13240;Name=LDO49_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13240;old_locus_tag=BCEP4_180046 NZ_CAJZAV010000090.1 Protein Homology CDS 38205 38816 . + 0 ID=cds-WP_060071834.1;Parent=gene-LDO49_RS13240;Dbxref=GenBank:WP_060071834.1;Name=WP_060071834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355231.1;locus_tag=LDO49_RS13240;product=hypothetical protein;protein_id=WP_060071834.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 38934 40235 . - . ID=gene-LDO49_RS13245;Name=LDO49_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13245;old_locus_tag=BCEP4_180047 NZ_CAJZAV010000090.1 Protein Homology CDS 38934 40235 . - 0 ID=cds-WP_059591134.1;Parent=gene-LDO49_RS13245;Dbxref=GenBank:WP_059591134.1;Name=WP_059591134.1;Ontology_term=GO:0007049,GO:0008360,GO:0009252,GO:0019277,GO:0051301,GO:0071555,GO:0008760;gbkey=CDS;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=cell cycle|0007049||IEA,regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198657.1;locus_tag=LDO49_RS13245;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_059591134.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 40441 41748 . - . ID=gene-LDO49_RS13250;Name=shiA;gbkey=Gene;gene=shiA;gene_biotype=protein_coding;locus_tag=LDO49_RS13250;old_locus_tag=BCEP4_180048 NZ_CAJZAV010000090.1 Protein Homology CDS 40441 41748 . - 0 ID=cds-WP_048023001.1;Parent=gene-LDO49_RS13250;Dbxref=GenBank:WP_048023001.1;Name=WP_048023001.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=shiA;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355229.1;locus_tag=LDO49_RS13250;product=shikimate transporter;protein_id=WP_048023001.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 42104 43231 . + . ID=gene-LDO49_RS13255;Name=LDO49_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13255;old_locus_tag=BCEP4_180049 NZ_CAJZAV010000090.1 Protein Homology CDS 42104 43231 . + 0 ID=cds-WP_021162738.1;Parent=gene-LDO49_RS13255;Dbxref=GenBank:WP_021162738.1;Name=WP_021162738.1;Ontology_term=GO:0009072,GO:0003868,GO:0016701;gbkey=CDS;go_function=4-hydroxyphenylpyruvate dioxygenase activity|0003868||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen|0016701||IEA;go_process=aromatic amino acid metabolic process|0009072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658813.1;locus_tag=LDO49_RS13255;product=4-hydroxyphenylpyruvate dioxygenase family protein;protein_id=WP_021162738.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 43278 44513 . - . ID=gene-LDO49_RS13260;Name=LDO49_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13260;old_locus_tag=BCEP4_180050 NZ_CAJZAV010000090.1 Protein Homology CDS 43278 44513 . - 0 ID=cds-WP_060071837.1;Parent=gene-LDO49_RS13260;Dbxref=GenBank:WP_060071837.1;Name=WP_060071837.1;Ontology_term=GO:0010181,GO:0016491,GO:0016651,GO:0030554;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485217.1;locus_tag=LDO49_RS13260;product=NADH:flavin oxidoreductase;protein_id=WP_060071837.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 44692 46032 . - . ID=gene-LDO49_RS13265;Name=LDO49_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13265;old_locus_tag=BCEP4_180051 NZ_CAJZAV010000090.1 Protein Homology CDS 44692 46032 . - 0 ID=cds-WP_059492245.1;Parent=gene-LDO49_RS13265;Dbxref=GenBank:WP_059492245.1;Name=WP_059492245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547702.1;locus_tag=LDO49_RS13265;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_059492245.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 46035 46463 . - . ID=gene-LDO49_RS13270;Name=LDO49_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13270;old_locus_tag=BCEP4_180052 NZ_CAJZAV010000090.1 Protein Homology CDS 46035 46463 . - 0 ID=cds-WP_021162735.1;Parent=gene-LDO49_RS13270;Dbxref=GenBank:WP_021162735.1;Name=WP_021162735.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403534.1;locus_tag=LDO49_RS13270;product=helix-turn-helix domain-containing protein;protein_id=WP_021162735.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 46616 47740 . - . ID=gene-LDO49_RS13275;Name=ribBA;gbkey=Gene;gene=ribBA;gene_biotype=protein_coding;locus_tag=LDO49_RS13275;old_locus_tag=BCEP4_180053 NZ_CAJZAV010000090.1 Protein Homology CDS 46616 47740 . - 0 ID=cds-WP_059650697.1;Parent=gene-LDO49_RS13275;Dbxref=GenBank:WP_059650697.1;Name=WP_059650697.1;Ontology_term=GO:0003935,GO:0008686;gbkey=CDS;gene=ribBA;go_function=GTP cyclohydrolase II activity|0003935||IEA,3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485225.1;locus_tag=LDO49_RS13275;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_059650697.1;transl_table=11 NZ_CAJZAV010000090.1 RefSeq gene 47737 48174 . - . ID=gene-LDO49_RS13280;Name=LDO49_RS13280;end_range=48174,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13280;old_locus_tag=BCEP4_180054;partial=true NZ_CAJZAV010000090.1 Protein Homology CDS 47737 48174 . - 0 ID=cds-WP_224051861.1;Parent=gene-LDO49_RS13280;Dbxref=GenBank:WP_224051861.1;Name=WP_224051861.1;Ontology_term=GO:0016787;end_range=48174,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355223.1;locus_tag=LDO49_RS13280;partial=true;product=alpha/beta hydrolase fold domain-containing protein;protein_id=WP_224051861.1;transl_table=11 ##sequence-region NZ_CAJZAV010000091.1 1 11300 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000091.1 RefSeq region 1 11300 . + . ID=NZ_CAJZAV010000091.1:1..11300;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_180 NZ_CAJZAV010000091.1 RefSeq gene 1 262 . + . ID=gene-LDO49_RS38030;Name=LDO49_RS38030;end_range=262,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38030;old_locus_tag=BCEP4_1800001;partial=true;start_range=.,1 NZ_CAJZAV010000091.1 Protein Homology CDS 1 262 . + 2 ID=cds-WP_443797953.1;Parent=gene-LDO49_RS38030;Dbxref=GenBank:WP_443797953.1;Name=WP_443797953.1;Ontology_term=GO:0004553;end_range=262,.;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498311.1;locus_tag=LDO49_RS38030;partial=true;product=maltotransferase domain-containing protein;protein_id=WP_443797953.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000091.1 RefSeq gene 273 476 . + . ID=gene-LDO49_RS38035;Name=LDO49_RS38035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38035;partial=true;start_range=.,273 NZ_CAJZAV010000091.1 Protein Homology CDS 273 476 . + 0 ID=cds-WP_443797952.1;Parent=gene-LDO49_RS38035;Dbxref=GenBank:WP_443797952.1;Name=WP_443797952.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023324.6;locus_tag=LDO49_RS38035;partial=true;product=hypothetical protein;protein_id=WP_443797952.1;start_range=.,273;transl_table=11 NZ_CAJZAV010000091.1 RefSeq gene 419 1843 . + . ID=gene-LDO49_RS13290;Name=LDO49_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13290;old_locus_tag=BCEP4_1800002 NZ_CAJZAV010000091.1 Protein Homology CDS 419 1843 . + 0 ID=cds-WP_224051863.1;Parent=gene-LDO49_RS13290;Dbxref=GenBank:WP_224051863.1;Name=WP_224051863.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF012356.7;locus_tag=LDO49_RS13290;product=alpha-amylase family glycosyl hydrolase;protein_id=WP_224051863.1;transl_table=11 NZ_CAJZAV010000091.1 RefSeq gene 1843 5256 . + . ID=gene-LDO49_RS13295;Name=treS;gbkey=Gene;gene=treS;gene_biotype=protein_coding;locus_tag=LDO49_RS13295;old_locus_tag=BCEP4_1800003 NZ_CAJZAV010000091.1 Protein Homology CDS 1843 5256 . + 0 ID=cds-WP_059486159.1;Parent=gene-LDO49_RS13295;Dbxref=GenBank:WP_059486159.1;Name=WP_059486159.1;Ontology_term=GO:0005991,GO:0047471;gbkey=CDS;gene=treS;go_function=maltose alpha-D-glucosyltransferase activity|0047471||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879950.1;locus_tag=LDO49_RS13295;product=maltose alpha-D-glucosyltransferase;protein_id=WP_059486159.1;transl_table=11 NZ_CAJZAV010000091.1 RefSeq gene 5253 7460 . + . ID=gene-LDO49_RS13300;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=LDO49_RS13300;old_locus_tag=BCEP4_1800004 NZ_CAJZAV010000091.1 Protein Homology CDS 5253 7460 . + 0 ID=cds-WP_059555748.1;Parent=gene-LDO49_RS13300;Dbxref=GenBank:WP_059555748.1;Name=WP_059555748.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521799.1;locus_tag=LDO49_RS13300;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=WP_059555748.1;transl_table=11 NZ_CAJZAV010000091.1 RefSeq gene 7493 9607 . + . ID=gene-LDO49_RS13305;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=LDO49_RS13305;old_locus_tag=BCEP4_1800005 NZ_CAJZAV010000091.1 Protein Homology CDS 7493 9607 . + 0 ID=cds-WP_021163727.1;Parent=gene-LDO49_RS13305;Dbxref=GenBank:WP_021163727.1;Name=WP_021163727.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372640.1;locus_tag=LDO49_RS13305;product=glycogen debranching protein GlgX;protein_id=WP_021163727.1;transl_table=11 NZ_CAJZAV010000091.1 RefSeq gene 9616 11300 . + . ID=gene-LDO49_RS13310;Name=treZ;end_range=11300,.;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=LDO49_RS13310;partial=true NZ_CAJZAV010000091.1 Protein Homology CDS 9616 11300 . + 0 ID=cds-WP_224051865.1;Parent=gene-LDO49_RS13310;Dbxref=GenBank:WP_224051865.1;Name=WP_224051865.1;Ontology_term=GO:0005992,GO:0033942;end_range=11300,.;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336632.1;locus_tag=LDO49_RS13310;partial=true;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_224051865.1;transl_table=11 ##sequence-region NZ_CAJZAV010000092.1 1 14590 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000092.1 RefSeq region 1 14590 . + . ID=NZ_CAJZAV010000092.1:1..14590;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_181 NZ_CAJZAV010000092.1 RefSeq gene 193 2007 . - . ID=gene-LDO49_RS13315;Name=LDO49_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13315;old_locus_tag=BCEP4_1810002 NZ_CAJZAV010000092.1 Protein Homology CDS 193 2007 . - 0 ID=cds-WP_059496654.1;Parent=gene-LDO49_RS13315;Dbxref=GenBank:WP_059496654.1;Name=WP_059496654.1;Ontology_term=GO:0009306,GO:0097347;gbkey=CDS;go_component=TAM protein secretion complex|0097347||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405825.1;locus_tag=LDO49_RS13315;product=autotransporter assembly complex protein TamA;protein_id=WP_059496654.1;transl_table=11 NZ_CAJZAV010000092.1 RefSeq gene 2273 2461 . + . ID=gene-LDO49_RS13320;Name=LDO49_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13320;old_locus_tag=BCEP4_1810003 NZ_CAJZAV010000092.1 Protein Homology CDS 2273 2461 . + 0 ID=cds-WP_006478107.1;Parent=gene-LDO49_RS13320;Dbxref=GenBank:WP_006478107.1;Name=WP_006478107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333879.1;locus_tag=LDO49_RS13320;product=DUF3460 family protein;protein_id=WP_006478107.1;transl_table=11 NZ_CAJZAV010000092.1 RefSeq gene 2466 3338 . + . ID=gene-LDO49_RS13325;Name=LDO49_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13325;old_locus_tag=BCEP4_1810004 NZ_CAJZAV010000092.1 Protein Homology CDS 2466 3338 . + 0 ID=cds-WP_021164248.1;Parent=gene-LDO49_RS13325;Dbxref=GenBank:WP_021164248.1;Name=WP_021164248.1;Ontology_term=GO:0007059,GO:0051301;gbkey=CDS;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102217.1;locus_tag=LDO49_RS13325;product=segregation and condensation protein A;protein_id=WP_021164248.1;transl_table=11 NZ_CAJZAV010000092.1 RefSeq gene 3624 4463 . + . ID=gene-LDO49_RS13330;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=LDO49_RS13330;old_locus_tag=BCEP4_1810005 NZ_CAJZAV010000092.1 Protein Homology CDS 3624 4463 . + 0 ID=cds-WP_021164249.1;Parent=gene-LDO49_RS13330;Dbxref=GenBank:WP_021164249.1;Name=WP_021164249.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352891.1;locus_tag=LDO49_RS13330;product=pantoate--beta-alanine ligase;protein_id=WP_021164249.1;transl_table=11 NZ_CAJZAV010000092.1 RefSeq gene 4509 4895 . + . ID=gene-LDO49_RS13335;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=LDO49_RS13335;old_locus_tag=BCEP4_1810006 NZ_CAJZAV010000092.1 Protein Homology CDS 4509 4895 . + 0 ID=cds-WP_021164250.1;Parent=gene-LDO49_RS13335;Dbxref=GenBank:WP_021164250.1;Name=WP_021164250.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006048527.1;locus_tag=LDO49_RS13335;product=aspartate 1-decarboxylase;protein_id=WP_021164250.1;transl_table=11 NZ_CAJZAV010000092.1 RefSeq gene 5055 5723 . - . ID=gene-LDO49_RS13340;Name=LDO49_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13340;old_locus_tag=BCEP4_1810007 NZ_CAJZAV010000092.1 Protein Homology CDS 5055 5723 . - 0 ID=cds-WP_059496656.1;Parent=gene-LDO49_RS13340;Dbxref=GenBank:WP_059496656.1;Name=WP_059496656.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352893.1;locus_tag=LDO49_RS13340;product=ParA family protein;protein_id=WP_059496656.1;transl_table=11 NZ_CAJZAV010000092.1 RefSeq gene 5882 6295 . - . ID=gene-LDO49_RS13345;Name=LDO49_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13345;old_locus_tag=BCEP4_1810008 NZ_CAJZAV010000092.1 Protein Homology CDS 5882 6295 . - 0 ID=cds-WP_027786730.1;Parent=gene-LDO49_RS13345;Dbxref=GenBank:WP_027786730.1;Name=WP_027786730.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761257.1;locus_tag=LDO49_RS13345;product=DoxX family protein;protein_id=WP_027786730.1;transl_table=11 NZ_CAJZAV010000092.1 RefSeq gene 6445 6585 . - . ID=gene-LDO49_RS13350;Name=LDO49_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13350;old_locus_tag=BCEP4_1810010 NZ_CAJZAV010000092.1 Protein Homology CDS 6445 6585 . - 0 ID=cds-WP_165581354.1;Parent=gene-LDO49_RS13350;Dbxref=GenBank:WP_165581354.1;Name=WP_165581354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484040.1;locus_tag=LDO49_RS13350;product=hypothetical protein;protein_id=WP_165581354.1;transl_table=11 NZ_CAJZAV010000092.1 RefSeq gene 6667 8178 . - . ID=gene-LDO49_RS13355;Name=LDO49_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13355;old_locus_tag=BCEP4_1810011 NZ_CAJZAV010000092.1 Protein Homology CDS 6667 8178 . - 0 ID=cds-WP_124843324.1;Parent=gene-LDO49_RS13355;Dbxref=GenBank:WP_124843324.1;Name=WP_124843324.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657662.1;locus_tag=LDO49_RS13355;product=cobyric acid synthase;protein_id=WP_124843324.1;transl_table=11 NZ_CAJZAV010000092.1 RefSeq gene 8253 8807 . + . ID=gene-LDO49_RS13360;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=LDO49_RS13360;old_locus_tag=BCEP4_1810012 NZ_CAJZAV010000092.1 Protein Homology CDS 8253 8807 . + 0 ID=cds-WP_048022573.1;Parent=gene-LDO49_RS13360;Dbxref=GenBank:WP_048022573.1;Name=WP_048022573.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364467.1;locus_tag=LDO49_RS13360;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_048022573.1;transl_table=11 NZ_CAJZAV010000092.1 RefSeq gene 8801 9745 . + . ID=gene-LDO49_RS13365;Name=cbiB;gbkey=Gene;gene=cbiB;gene_biotype=protein_coding;locus_tag=LDO49_RS13365;old_locus_tag=BCEP4_1810013 NZ_CAJZAV010000092.1 Protein Homology CDS 8801 9745 . + 0 ID=cds-WP_059496660.1;Parent=gene-LDO49_RS13365;Dbxref=GenBank:WP_059496660.1;Name=WP_059496660.1;Ontology_term=GO:0009236,GO:0048472,GO:0016020;gbkey=CDS;gene=cbiB;go_component=membrane|0016020||IEA;go_function=threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352897.1;locus_tag=LDO49_RS13365;product=adenosylcobinamide-phosphate synthase CbiB;protein_id=WP_059496660.1;transl_table=11 NZ_CAJZAV010000092.1 RefSeq gene 9738 10757 . + . ID=gene-LDO49_RS13370;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=LDO49_RS13370;old_locus_tag=BCEP4_1810014 NZ_CAJZAV010000092.1 Protein Homology CDS 9738 10757 . + 0 ID=cds-WP_124843322.1;Parent=gene-LDO49_RS13370;Dbxref=GenBank:WP_124843322.1;Name=WP_124843322.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;gene=cobD;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329017.1;locus_tag=LDO49_RS13370;product=threonine-phosphate decarboxylase CobD;protein_id=WP_124843322.1;transl_table=11 NZ_CAJZAV010000092.1 RefSeq gene 10754 11671 . + . ID=gene-LDO49_RS13375;Name=LDO49_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13375;old_locus_tag=BCEP4_1810015 NZ_CAJZAV010000092.1 Protein Homology CDS 10754 11671 . + 0 ID=cds-WP_124843320.1;Parent=gene-LDO49_RS13375;Dbxref=GenBank:WP_124843320.1;Name=WP_124843320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545969.1;locus_tag=LDO49_RS13375;product=cobalamin-binding protein;protein_id=WP_124843320.1;transl_table=11 NZ_CAJZAV010000092.1 RefSeq gene 11775 12359 . - . ID=gene-LDO49_RS13380;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=protein_coding;locus_tag=LDO49_RS13380;old_locus_tag=BCEP4_1810016 NZ_CAJZAV010000092.1 Protein Homology CDS 11775 12359 . - 0 ID=cds-WP_048022577.1;Parent=gene-LDO49_RS13380;Dbxref=GenBank:WP_048022577.1;Name=WP_048022577.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;gene=cobC;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522560.1;locus_tag=LDO49_RS13380;product=alpha-ribazole phosphatase;protein_id=WP_048022577.1;transl_table=11 NZ_CAJZAV010000092.1 RefSeq gene 12344 13120 . - . ID=gene-LDO49_RS13385;Name=LDO49_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13385;old_locus_tag=BCEP4_1810017 NZ_CAJZAV010000092.1 Protein Homology CDS 12344 13120 . - 0 ID=cds-WP_059484665.1;Parent=gene-LDO49_RS13385;Dbxref=GenBank:WP_059484665.1;Name=WP_059484665.1;Ontology_term=GO:0051073;gbkey=CDS;go_function=adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478096.1;locus_tag=LDO49_RS13385;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_059484665.1;transl_table=11 NZ_CAJZAV010000092.1 RefSeq gene 13110 14165 . - . ID=gene-LDO49_RS13390;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=LDO49_RS13390;old_locus_tag=BCEP4_1810018 NZ_CAJZAV010000092.1 Protein Homology CDS 13110 14165 . - 0 ID=cds-WP_042975791.1;Parent=gene-LDO49_RS13390;Dbxref=GenBank:WP_042975791.1;Name=WP_042975791.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694361.1;locus_tag=LDO49_RS13390;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_042975791.1;transl_table=11 NZ_CAJZAV010000092.1 RefSeq gene 14218 14590 . - . ID=gene-LDO49_RS13395;Name=LDO49_RS13395;end_range=14590,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13395;old_locus_tag=BCEP4_1810019;partial=true NZ_CAJZAV010000092.1 Protein Homology CDS 14218 14590 . - 1 ID=cds-WP_224051867.1;Parent=gene-LDO49_RS13395;Dbxref=GenBank:WP_224051867.1;Name=WP_224051867.1;Ontology_term=GO:0005524;end_range=14590,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409917.1;locus_tag=LDO49_RS13395;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_224051867.1;transl_table=11 ##sequence-region NZ_CAJZAV010000093.1 1 24314 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000093.1 RefSeq region 1 24314 . + . ID=NZ_CAJZAV010000093.1:1..24314;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_182 NZ_CAJZAV010000093.1 RefSeq gene 1 515 . + . ID=gene-LDO49_RS13400;Name=LDO49_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13400;old_locus_tag=BCEP4_1820001;partial=true;start_range=.,1 NZ_CAJZAV010000093.1 Protein Homology CDS 1 515 . + 2 ID=cds-WP_224051869.1;Parent=gene-LDO49_RS13400;Dbxref=GenBank:WP_224051869.1;Name=WP_224051869.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF014385.6;locus_tag=LDO49_RS13400;partial=true;product=TolC family protein;protein_id=WP_224051869.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000093.1 RefSeq gene 512 1732 . + . ID=gene-LDO49_RS13405;Name=LDO49_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13405;old_locus_tag=BCEP4_1820002 NZ_CAJZAV010000093.1 Protein Homology CDS 512 1732 . + 0 ID=cds-WP_060154469.1;Parent=gene-LDO49_RS13405;Dbxref=GenBank:WP_060154469.1;Name=WP_060154469.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878010.1;locus_tag=LDO49_RS13405;product=HlyD family secretion protein;protein_id=WP_060154469.1;transl_table=11 NZ_CAJZAV010000093.1 RefSeq gene 1735 3273 . + . ID=gene-LDO49_RS13410;Name=LDO49_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13410;old_locus_tag=BCEP4_1820003 NZ_CAJZAV010000093.1 Protein Homology CDS 1735 3273 . + 0 ID=cds-WP_224051871.1;Parent=gene-LDO49_RS13410;Dbxref=GenBank:WP_224051871.1;Name=WP_224051871.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878011.1;locus_tag=LDO49_RS13410;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_224051871.1;transl_table=11 NZ_CAJZAV010000093.1 RefSeq pseudogene 3307 3912 . + . ID=gene-LDO49_RS13415;Name=LDO49_RS13415;end_range=3912,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS13415;old_locus_tag=BCEP4_1820004;partial=true;pseudo=true;start_range=.,3307 NZ_CAJZAV010000093.1 Protein Homology CDS 3307 3912 . + 0 ID=cds-LDO49_RS13415;Parent=gene-LDO49_RS13415;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=3912,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008922272.1;locus_tag=LDO49_RS13415;partial=true;product=aldo/keto reductase;pseudo=true;start_range=.,3307;transl_table=11 NZ_CAJZAV010000093.1 RefSeq gene 3978 6455 . - . ID=gene-LDO49_RS13420;Name=LDO49_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13420;old_locus_tag=BCEP4_1820005 NZ_CAJZAV010000093.1 Protein Homology CDS 3978 6455 . - 0 ID=cds-WP_124475307.1;Parent=gene-LDO49_RS13420;Dbxref=GenBank:WP_124475307.1;Name=WP_124475307.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065882.1;locus_tag=LDO49_RS13420;product=AsmA family protein;protein_id=WP_124475307.1;transl_table=11 NZ_CAJZAV010000093.1 RefSeq gene 6708 8516 . + . ID=gene-LDO49_RS13425;Name=LDO49_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13425;old_locus_tag=BCEP4_1820006 NZ_CAJZAV010000093.1 Protein Homology CDS 6708 8516 . + 0 ID=cds-WP_124475308.1;Parent=gene-LDO49_RS13425;Dbxref=GenBank:WP_124475308.1;Name=WP_124475308.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100254.1;locus_tag=LDO49_RS13425;product=alkaline phosphatase D family protein;protein_id=WP_124475308.1;transl_table=11 NZ_CAJZAV010000093.1 RefSeq gene 8616 8762 . - . ID=gene-LDO49_RS13430;Name=LDO49_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13430;old_locus_tag=BCEP4_1820007 NZ_CAJZAV010000093.1 Protein Homology CDS 8616 8762 . - 0 ID=cds-WP_021157720.1;Parent=gene-LDO49_RS13430;Dbxref=GenBank:WP_021157720.1;Name=WP_021157720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751684.1;locus_tag=LDO49_RS13430;product=DUF3096 domain-containing protein;protein_id=WP_021157720.1;transl_table=11 NZ_CAJZAV010000093.1 RefSeq gene 8982 9197 . + . ID=gene-LDO49_RS37530;Name=LDO49_RS37530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37530 NZ_CAJZAV010000093.1 Protein Homology CDS 8982 9197 . + 0 ID=cds-WP_372585841.1;Parent=gene-LDO49_RS37530;Dbxref=GenBank:WP_372585841.1;Name=WP_372585841.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012336.6;locus_tag=LDO49_RS37530;product=hypothetical protein;protein_id=WP_372585841.1;transl_table=11 NZ_CAJZAV010000093.1 RefSeq gene 9364 9681 . + . ID=gene-LDO49_RS37535;Name=LDO49_RS37535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37535;old_locus_tag=BCEP4_1820008 NZ_CAJZAV010000093.1 Protein Homology CDS 9364 9681 . + 0 ID=cds-WP_443797954.1;Parent=gene-LDO49_RS37535;Dbxref=GenBank:WP_443797954.1;Name=WP_443797954.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014820.6;locus_tag=LDO49_RS37535;product=hypothetical protein;protein_id=WP_443797954.1;transl_table=11 NZ_CAJZAV010000093.1 RefSeq gene 9973 10398 . + . ID=gene-LDO49_RS13440;Name=LDO49_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13440 NZ_CAJZAV010000093.1 Protein Homology CDS 9973 10398 . + 0 ID=cds-WP_124475310.1;Parent=gene-LDO49_RS13440;Dbxref=GenBank:WP_124475310.1;Name=WP_124475310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691779.1;locus_tag=LDO49_RS13440;product=hypothetical protein;protein_id=WP_124475310.1;transl_table=11 NZ_CAJZAV010000093.1 RefSeq pseudogene 10395 10645 . + . ID=gene-LDO49_RS13445;Name=LDO49_RS13445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS13445;pseudo=true NZ_CAJZAV010000093.1 Protein Homology CDS 10395 10645 . + 0 ID=cds-LDO49_RS13445;Parent=gene-LDO49_RS13445;Note=frameshifted;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691782.1;locus_tag=LDO49_RS13445;product=PAAR domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAV010000093.1 RefSeq gene 10765 10956 . - . ID=gene-LDO49_RS13450;Name=LDO49_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13450;old_locus_tag=BCEP4_1820010 NZ_CAJZAV010000093.1 GeneMarkS-2+ CDS 10765 10956 . - 0 ID=cds-WP_060154459.1;Parent=gene-LDO49_RS13450;Dbxref=GenBank:WP_060154459.1;Name=WP_060154459.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS13450;product=hypothetical protein;protein_id=WP_060154459.1;transl_table=11 NZ_CAJZAV010000093.1 RefSeq gene 11230 11604 . - . ID=gene-LDO49_RS13455;Name=LDO49_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13455 NZ_CAJZAV010000093.1 GeneMarkS-2+ CDS 11230 11604 . - 0 ID=cds-WP_224051873.1;Parent=gene-LDO49_RS13455;Dbxref=GenBank:WP_224051873.1;Name=WP_224051873.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS13455;product=hypothetical protein;protein_id=WP_224051873.1;transl_table=11 NZ_CAJZAV010000093.1 RefSeq gene 11915 13033 . - . ID=gene-LDO49_RS13465;Name=LDO49_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13465;old_locus_tag=BCEP4_1820012 NZ_CAJZAV010000093.1 Protein Homology CDS 11915 13033 . - 0 ID=cds-WP_059585679.1;Parent=gene-LDO49_RS13465;Dbxref=GenBank:WP_059585679.1;Name=WP_059585679.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900652.1;locus_tag=LDO49_RS13465;product=helix-turn-helix transcriptional regulator;protein_id=WP_059585679.1;transl_table=11 NZ_CAJZAV010000093.1 RefSeq gene 13270 15351 . + . ID=gene-LDO49_RS13470;Name=LDO49_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13470;old_locus_tag=BCEP4_1820013 NZ_CAJZAV010000093.1 Protein Homology CDS 13270 15351 . + 0 ID=cds-WP_124475311.1;Parent=gene-LDO49_RS13470;Dbxref=GenBank:WP_124475311.1;Name=WP_124475311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754434.1;locus_tag=LDO49_RS13470;product=hypothetical protein;protein_id=WP_124475311.1;transl_table=11 NZ_CAJZAV010000093.1 RefSeq gene 15717 16640 . - . ID=gene-LDO49_RS13475;Name=LDO49_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13475;old_locus_tag=BCEP4_1820014 NZ_CAJZAV010000093.1 Protein Homology CDS 15717 16640 . - 0 ID=cds-WP_042973658.1;Parent=gene-LDO49_RS13475;Dbxref=GenBank:WP_042973658.1;Name=WP_042973658.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691588.1;locus_tag=LDO49_RS13475;product=LysR family transcriptional regulator;protein_id=WP_042973658.1;transl_table=11 NZ_CAJZAV010000093.1 RefSeq gene 16764 17321 . - . ID=gene-LDO49_RS13480;Name=LDO49_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13480;old_locus_tag=BCEP4_1820015 NZ_CAJZAV010000093.1 Protein Homology CDS 16764 17321 . - 0 ID=cds-WP_059863817.1;Parent=gene-LDO49_RS13480;Dbxref=GenBank:WP_059863817.1;Name=WP_059863817.1;Ontology_term=GO:0030638;gbkey=CDS;go_process=polyketide metabolic process|0030638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722905.1;locus_tag=LDO49_RS13480;product=ester cyclase;protein_id=WP_059863817.1;transl_table=11 NZ_CAJZAV010000093.1 RefSeq gene 17444 18490 . - . ID=gene-LDO49_RS13485;Name=LDO49_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13485;old_locus_tag=BCEP4_1820016 NZ_CAJZAV010000093.1 Protein Homology CDS 17444 18490 . - 0 ID=cds-WP_124475312.1;Parent=gene-LDO49_RS13485;Dbxref=GenBank:WP_124475312.1;Name=WP_124475312.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891587.1;locus_tag=LDO49_RS13485;product=polysaccharide deacetylase family protein;protein_id=WP_124475312.1;transl_table=11 NZ_CAJZAV010000093.1 RefSeq gene 18715 20040 . - . ID=gene-LDO49_RS13490;Name=LDO49_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13490;old_locus_tag=BCEP4_1820017 NZ_CAJZAV010000093.1 Protein Homology CDS 18715 20040 . - 0 ID=cds-WP_372585843.1;Parent=gene-LDO49_RS13490;Dbxref=GenBank:WP_372585843.1;Name=WP_372585843.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011614674.1;locus_tag=LDO49_RS13490;product=MFS transporter;protein_id=WP_372585843.1;transl_table=11 NZ_CAJZAV010000093.1 RefSeq gene 20086 20478 . - . ID=gene-LDO49_RS13495;Name=LDO49_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13495;old_locus_tag=BCEP4_1820018 NZ_CAJZAV010000093.1 Protein Homology CDS 20086 20478 . - 0 ID=cds-WP_224051875.1;Parent=gene-LDO49_RS13495;Dbxref=GenBank:WP_224051875.1;Name=WP_224051875.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014958.6;locus_tag=LDO49_RS13495;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_224051875.1;transl_table=11 NZ_CAJZAV010000093.1 RefSeq gene 20577 21539 . + . ID=gene-LDO49_RS13500;Name=LDO49_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13500;old_locus_tag=BCEP4_1820019 NZ_CAJZAV010000093.1 Protein Homology CDS 20577 21539 . + 0 ID=cds-WP_224051876.1;Parent=gene-LDO49_RS13500;Dbxref=GenBank:WP_224051876.1;Name=WP_224051876.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.6;locus_tag=LDO49_RS13500;product=LysR substrate-binding domain-containing protein;protein_id=WP_224051876.1;transl_table=11 NZ_CAJZAV010000093.1 RefSeq gene 21742 22452 . - . ID=gene-LDO49_RS13505;Name=LDO49_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13505;old_locus_tag=BCEP4_1820020 NZ_CAJZAV010000093.1 Protein Homology CDS 21742 22452 . - 0 ID=cds-WP_224051877.1;Parent=gene-LDO49_RS13505;Dbxref=GenBank:WP_224051877.1;Name=WP_224051877.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007744117.1;locus_tag=LDO49_RS13505;product=SDR family oxidoreductase;protein_id=WP_224051877.1;transl_table=11 NZ_CAJZAV010000093.1 RefSeq pseudogene 22476 22634 . - . ID=gene-LDO49_RS13510;Name=LDO49_RS13510;end_range=22634,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS13510;old_locus_tag=BCEP4_1820021;partial=true;pseudo=true;start_range=.,22476 NZ_CAJZAV010000093.1 Protein Homology CDS 22476 22634 . - 0 ID=cds-LDO49_RS13510;Parent=gene-LDO49_RS13510;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0010181,GO:0016491;end_range=22634,.;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010122759.1;locus_tag=LDO49_RS13510;partial=true;product=oxidoreductase;pseudo=true;start_range=.,22476;transl_table=11 NZ_CAJZAV010000093.1 RefSeq gene 22653 23057 . - . ID=gene-LDO49_RS13515;Name=LDO49_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13515;old_locus_tag=BCEP4_1820023 NZ_CAJZAV010000093.1 Protein Homology CDS 22653 23057 . - 0 ID=cds-WP_224051878.1;Parent=gene-LDO49_RS13515;Dbxref=GenBank:WP_224051878.1;Name=WP_224051878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013589563.1;locus_tag=LDO49_RS13515;product=extradiol dioxygenase;protein_id=WP_224051878.1;transl_table=11 NZ_CAJZAV010000093.1 RefSeq gene 23568 24098 . + . ID=gene-LDO49_RS13520;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=LDO49_RS13520;old_locus_tag=BCEP4_1820025 NZ_CAJZAV010000093.1 Protein Homology CDS 23568 24098 . + 0 ID=cds-WP_060147532.1;Parent=gene-LDO49_RS13520;Dbxref=GenBank:WP_060147532.1;Name=WP_060147532.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217807.1;locus_tag=LDO49_RS13520;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_060147532.1;transl_table=11 NZ_CAJZAV010000093.1 RefSeq gene 24134 24314 . + . ID=gene-LDO49_RS13525;Name=LDO49_RS13525;end_range=24314,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13525;partial=true NZ_CAJZAV010000093.1 Protein Homology CDS 24134 24314 . + 0 ID=cds-WP_224051879.1;Parent=gene-LDO49_RS13525;Dbxref=GenBank:WP_224051879.1;Name=WP_224051879.1;end_range=24314,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498597.1;locus_tag=LDO49_RS13525;partial=true;product=hypothetical protein;protein_id=WP_224051879.1;transl_table=11 ##sequence-region NZ_CAJZAV010000094.1 1 3464 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000094.1 RefSeq region 1 3464 . + . ID=NZ_CAJZAV010000094.1:1..3464;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_183 NZ_CAJZAV010000094.1 RefSeq gene 1 204 . - . ID=gene-LDO49_RS38040;Name=LDO49_RS38040;end_range=204,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38040;partial=true;start_range=.,1 NZ_CAJZAV010000094.1 Protein Homology CDS 1 204 . - 2 ID=cds-WP_443797955.1;Parent=gene-LDO49_RS38040;Dbxref=GenBank:WP_443797955.1;Name=WP_443797955.1;end_range=204,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656582.1;locus_tag=LDO49_RS38040;partial=true;product=hypothetical protein;protein_id=WP_443797955.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000094.1 RefSeq gene 215 1355 . - . ID=gene-LDO49_RS13530;Name=bcsZ;gbkey=Gene;gene=bcsZ;gene_biotype=protein_coding;locus_tag=LDO49_RS13530;old_locus_tag=BCEP4_1830002;partial=true;start_range=.,215 NZ_CAJZAV010000094.1 Protein Homology CDS 215 1355 . - 0 ID=cds-WP_224051881.1;Parent=gene-LDO49_RS13530;Dbxref=GenBank:WP_224051881.1;Name=WP_224051881.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=bcsZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351692.1;locus_tag=LDO49_RS13530;partial=true;product=cellulose synthase complex periplasmic endoglucanase BcsZ;protein_id=WP_224051881.1;start_range=.,215;transl_table=11 NZ_CAJZAV010000094.1 RefSeq gene 1359 3464 . - . ID=gene-LDO49_RS13535;Name=bcsB;end_range=3464,.;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=LDO49_RS13535;old_locus_tag=BCEP4_1830004;partial=true NZ_CAJZAV010000094.1 Protein Homology CDS 1359 3464 . - 0 ID=cds-WP_224051883.1;Parent=gene-LDO49_RS13535;Dbxref=GenBank:WP_224051883.1;Name=WP_224051883.1;end_range=3464,.;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545161.1;locus_tag=LDO49_RS13535;partial=true;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_224051883.1;transl_table=11 ##sequence-region NZ_CAJZAV010000095.1 1 11086 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000095.1 RefSeq region 1 11086 . + . ID=NZ_CAJZAV010000095.1:1..11086;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_184 NZ_CAJZAV010000095.1 RefSeq gene 1 350 . + . ID=gene-LDO49_RS13540;Name=LDO49_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13540;old_locus_tag=BCEP4_1840001;partial=true;start_range=.,1 NZ_CAJZAV010000095.1 Protein Homology CDS 1 350 . + 2 ID=cds-WP_224051885.1;Parent=gene-LDO49_RS13540;Dbxref=GenBank:WP_224051885.1;Name=WP_224051885.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366420.1;locus_tag=LDO49_RS13540;partial=true;product=TolC family protein;protein_id=WP_224051885.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000095.1 RefSeq gene 473 1375 . - . ID=gene-LDO49_RS13545;Name=LDO49_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13545;old_locus_tag=BCEP4_1840002 NZ_CAJZAV010000095.1 Protein Homology CDS 473 1375 . - 0 ID=cds-WP_027792102.1;Parent=gene-LDO49_RS13545;Dbxref=GenBank:WP_027792102.1;Name=WP_027792102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497952.1;locus_tag=LDO49_RS13545;product=LysR substrate-binding domain-containing protein;protein_id=WP_027792102.1;transl_table=11 NZ_CAJZAV010000095.1 RefSeq gene 1581 2492 . - . ID=gene-LDO49_RS13550;Name=LDO49_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13550;old_locus_tag=BCEP4_1840003 NZ_CAJZAV010000095.1 Protein Homology CDS 1581 2492 . - 0 ID=cds-WP_081076201.1;Parent=gene-LDO49_RS13550;Dbxref=GenBank:WP_081076201.1;Name=WP_081076201.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497951.1;locus_tag=LDO49_RS13550;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_081076201.1;transl_table=11 NZ_CAJZAV010000095.1 RefSeq gene 2632 3294 . - . ID=gene-LDO49_RS13555;Name=LDO49_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13555;old_locus_tag=BCEP4_1840004 NZ_CAJZAV010000095.1 Protein Homology CDS 2632 3294 . - 0 ID=cds-WP_060147514.1;Parent=gene-LDO49_RS13555;Dbxref=GenBank:WP_060147514.1;Name=WP_060147514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485182.1;locus_tag=LDO49_RS13555;product=ankyrin repeat domain-containing protein;protein_id=WP_060147514.1;transl_table=11 NZ_CAJZAV010000095.1 RefSeq gene 3539 3910 . + . ID=gene-LDO49_RS13560;Name=LDO49_RS13560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13560;old_locus_tag=BCEP4_1840006 NZ_CAJZAV010000095.1 Protein Homology CDS 3539 3910 . + 0 ID=cds-WP_021163834.1;Parent=gene-LDO49_RS13560;Dbxref=GenBank:WP_021163834.1;Name=WP_021163834.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350213.1;locus_tag=LDO49_RS13560;product=cupin domain-containing protein;protein_id=WP_021163834.1;transl_table=11 NZ_CAJZAV010000095.1 RefSeq gene 4085 5254 . - . ID=gene-LDO49_RS13565;Name=ampC;gbkey=Gene;gene=ampC;gene_biotype=protein_coding;locus_tag=LDO49_RS13565;old_locus_tag=BCEP4_1840007 NZ_CAJZAV010000095.1 Protein Homology CDS 4085 5254 . - 0 ID=cds-WP_224051886.1;Parent=gene-LDO49_RS13565;Dbxref=GenBank:WP_224051886.1;Name=WP_224051886.1;Ontology_term=GO:0008800,GO:0030288;gbkey=CDS;gene=ampC;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350219.1;locus_tag=LDO49_RS13565;product=class C beta-lactamase;protein_id=WP_224051886.1;transl_table=11 NZ_CAJZAV010000095.1 RefSeq gene 5577 6389 . - . ID=gene-LDO49_RS13570;Name=LDO49_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13570;old_locus_tag=BCEP4_1840009 NZ_CAJZAV010000095.1 Protein Homology CDS 5577 6389 . - 0 ID=cds-WP_060147467.1;Parent=gene-LDO49_RS13570;Dbxref=GenBank:WP_060147467.1;Name=WP_060147467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481116.1;locus_tag=LDO49_RS13570;product=alpha/beta fold hydrolase;protein_id=WP_060147467.1;transl_table=11 NZ_CAJZAV010000095.1 RefSeq gene 6459 6929 . - . ID=gene-LDO49_RS13575;Name=LDO49_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13575;old_locus_tag=BCEP4_1840010 NZ_CAJZAV010000095.1 Protein Homology CDS 6459 6929 . - 0 ID=cds-WP_048029059.1;Parent=gene-LDO49_RS13575;Dbxref=GenBank:WP_048029059.1;Name=WP_048029059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337068.1;locus_tag=LDO49_RS13575;product=hypothetical protein;protein_id=WP_048029059.1;transl_table=11 NZ_CAJZAV010000095.1 RefSeq gene 7334 7468 . + . ID=gene-LDO49_RS37305;Name=LDO49_RS37305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37305;old_locus_tag=BCEP4_1840012 NZ_CAJZAV010000095.1 Protein Homology CDS 7334 7468 . + 0 ID=cds-WP_006767081.1;Parent=gene-LDO49_RS37305;Dbxref=GenBank:WP_006767081.1;Name=WP_006767081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880630.1;locus_tag=LDO49_RS37305;product=hypothetical protein;protein_id=WP_006767081.1;transl_table=11 NZ_CAJZAV010000095.1 RefSeq gene 7585 8361 . + . ID=gene-LDO49_RS13580;Name=LDO49_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13580;old_locus_tag=BCEP4_1840011 NZ_CAJZAV010000095.1 Protein Homology CDS 7585 8361 . + 0 ID=cds-WP_060147466.1;Parent=gene-LDO49_RS13580;Dbxref=GenBank:WP_060147466.1;Name=WP_060147466.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350225.1;locus_tag=LDO49_RS13580;product=class I SAM-dependent methyltransferase;protein_id=WP_060147466.1;transl_table=11 NZ_CAJZAV010000095.1 RefSeq gene 8473 11086 . - . ID=gene-LDO49_RS13585;Name=LDO49_RS13585;end_range=11086,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13585;old_locus_tag=BCEP4_1840013;partial=true NZ_CAJZAV010000095.1 Protein Homology CDS 8473 11086 . - 1 ID=cds-WP_224051888.1;Parent=gene-LDO49_RS13585;Dbxref=GenBank:WP_224051888.1;Name=WP_224051888.1;end_range=11086,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350226.1;locus_tag=LDO49_RS13585;partial=true;product=glycoside hydrolase family 2 protein;protein_id=WP_224051888.1;transl_table=11 ##sequence-region NZ_CAJZAV010000096.1 1 8565 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000096.1 RefSeq region 1 8565 . + . ID=NZ_CAJZAV010000096.1:1..8565;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_185 NZ_CAJZAV010000096.1 RefSeq gene 1 919 . - . ID=gene-LDO49_RS13590;Name=LDO49_RS13590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13590;partial=true;start_range=.,1 NZ_CAJZAV010000096.1 Protein Homology CDS 1 919 . - 0 ID=cds-WP_224051889.1;Parent=gene-LDO49_RS13590;Dbxref=GenBank:WP_224051889.1;Name=WP_224051889.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694987.1;locus_tag=LDO49_RS13590;partial=true;product=HlyD family secretion protein;protein_id=WP_224051889.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000096.1 RefSeq gene 1003 2580 . + . ID=gene-LDO49_RS13595;Name=LDO49_RS13595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13595;old_locus_tag=BCEP4_1850002 NZ_CAJZAV010000096.1 Protein Homology CDS 1003 2580 . + 0 ID=cds-WP_059485773.1;Parent=gene-LDO49_RS13595;Dbxref=GenBank:WP_059485773.1;Name=WP_059485773.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545664.1;locus_tag=LDO49_RS13595;product=MFS transporter;protein_id=WP_059485773.1;transl_table=11 NZ_CAJZAV010000096.1 RefSeq gene 2725 3546 . - . ID=gene-LDO49_RS13600;Name=LDO49_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13600;old_locus_tag=BCEP4_1850004 NZ_CAJZAV010000096.1 Protein Homology CDS 2725 3546 . - 0 ID=cds-WP_042973930.1;Parent=gene-LDO49_RS13600;Dbxref=GenBank:WP_042973930.1;Name=WP_042973930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108042.1;locus_tag=LDO49_RS13600;product=alpha/beta fold hydrolase;protein_id=WP_042973930.1;transl_table=11 NZ_CAJZAV010000096.1 RefSeq gene 4105 4530 . + . ID=gene-LDO49_RS13605;Name=LDO49_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13605;old_locus_tag=BCEP4_1850005 NZ_CAJZAV010000096.1 Protein Homology CDS 4105 4530 . + 0 ID=cds-WP_021158281.1;Parent=gene-LDO49_RS13605;Dbxref=GenBank:WP_021158281.1;Name=WP_021158281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337486.1;locus_tag=LDO49_RS13605;product=DUF3331 domain-containing protein;protein_id=WP_021158281.1;transl_table=11 NZ_CAJZAV010000096.1 RefSeq gene 4601 5422 . + . ID=gene-LDO49_RS13610;Name=LDO49_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13610;old_locus_tag=BCEP4_1850006 NZ_CAJZAV010000096.1 Protein Homology CDS 4601 5422 . + 0 ID=cds-WP_059677923.1;Parent=gene-LDO49_RS13610;Dbxref=GenBank:WP_059677923.1;Name=WP_059677923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760325.1;locus_tag=LDO49_RS13610;product=alpha/beta fold hydrolase;protein_id=WP_059677923.1;transl_table=11 NZ_CAJZAV010000096.1 RefSeq gene 5475 6116 . - . ID=gene-LDO49_RS13615;Name=LDO49_RS13615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13615;old_locus_tag=BCEP4_1850007 NZ_CAJZAV010000096.1 Protein Homology CDS 5475 6116 . - 0 ID=cds-WP_059677922.1;Parent=gene-LDO49_RS13615;Dbxref=GenBank:WP_059677922.1;Name=WP_059677922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335693.1;locus_tag=LDO49_RS13615;product=HD domain-containing protein;protein_id=WP_059677922.1;transl_table=11 NZ_CAJZAV010000096.1 RefSeq gene 6630 8423 . + . ID=gene-LDO49_RS13620;Name=LDO49_RS13620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13620;old_locus_tag=BCEP4_1850008 NZ_CAJZAV010000096.1 Protein Homology CDS 6630 8423 . + 0 ID=cds-WP_048027056.1;Parent=gene-LDO49_RS13620;Dbxref=GenBank:WP_048027056.1;Name=WP_048027056.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337488.1;locus_tag=LDO49_RS13620;product=winged helix-turn-helix domain-containing protein;protein_id=WP_048027056.1;transl_table=11 ##sequence-region NZ_CAJZAV010000097.1 1 48246 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000097.1 RefSeq region 1 48246 . + . ID=NZ_CAJZAV010000097.1:1..48246;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_186 NZ_CAJZAV010000097.1 RefSeq gene 1 167 . + . ID=gene-LDO49_RS13625;Name=LDO49_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13625;old_locus_tag=BCEP4_1860001;partial=true;start_range=.,1 NZ_CAJZAV010000097.1 Protein Homology CDS 1 167 . + 2 ID=cds-WP_224051904.1;Parent=gene-LDO49_RS13625;Dbxref=GenBank:WP_224051904.1;Name=WP_224051904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339663.1;locus_tag=LDO49_RS13625;partial=true;product=SHOCT domain-containing protein;protein_id=WP_224051904.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 177 1694 . + . ID=gene-LDO49_RS13630;Name=LDO49_RS13630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13630;old_locus_tag=BCEP4_1860002 NZ_CAJZAV010000097.1 Protein Homology CDS 177 1694 . + 0 ID=cds-WP_059677551.1;Parent=gene-LDO49_RS13630;Dbxref=GenBank:WP_059677551.1;Name=WP_059677551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547262.1;locus_tag=LDO49_RS13630;product=DUF4178 domain-containing protein;protein_id=WP_059677551.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 1691 1840 . + . ID=gene-LDO49_RS13635;Name=LDO49_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13635 NZ_CAJZAV010000097.1 GeneMarkS-2+ CDS 1691 1840 . + 0 ID=cds-WP_153489189.1;Parent=gene-LDO49_RS13635;Dbxref=GenBank:WP_153489189.1;Name=WP_153489189.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS13635;product=hypothetical protein;protein_id=WP_153489189.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 1837 2232 . + . ID=gene-LDO49_RS13640;Name=speD;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=LDO49_RS13640;old_locus_tag=BCEP4_1860003 NZ_CAJZAV010000097.1 Protein Homology CDS 1837 2232 . + 0 ID=cds-WP_059485463.1;Parent=gene-LDO49_RS13640;Dbxref=GenBank:WP_059485463.1;Name=WP_059485463.1;Ontology_term=GO:0008295,GO:0004014;gbkey=CDS;gene=speD;go_function=adenosylmethionine decarboxylase activity|0004014||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491200.1;locus_tag=LDO49_RS13640;product=adenosylmethionine decarboxylase;protein_id=WP_059485463.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 2247 2633 . + . ID=gene-LDO49_RS13645;Name=LDO49_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13645;old_locus_tag=BCEP4_1860004 NZ_CAJZAV010000097.1 Protein Homology CDS 2247 2633 . + 0 ID=cds-WP_060070453.1;Parent=gene-LDO49_RS13645;Dbxref=GenBank:WP_060070453.1;Name=WP_060070453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354429.1;locus_tag=LDO49_RS13645;product=hypothetical protein;protein_id=WP_060070453.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 2807 3595 . - . ID=gene-LDO49_RS13650;Name=LDO49_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13650;old_locus_tag=BCEP4_1860005 NZ_CAJZAV010000097.1 Protein Homology CDS 2807 3595 . - 0 ID=cds-WP_224051890.1;Parent=gene-LDO49_RS13650;Dbxref=GenBank:WP_224051890.1;Name=WP_224051890.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018684.6;locus_tag=LDO49_RS13650;product=lysozyme inhibitor LprI family protein;protein_id=WP_224051890.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 3717 4604 . - . ID=gene-LDO49_RS13655;Name=LDO49_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13655;old_locus_tag=BCEP4_1860006 NZ_CAJZAV010000097.1 Protein Homology CDS 3717 4604 . - 0 ID=cds-WP_021162998.1;Parent=gene-LDO49_RS13655;Dbxref=GenBank:WP_021162998.1;Name=WP_021162998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354431.1;locus_tag=LDO49_RS13655;product=DUF4261 domain-containing protein;protein_id=WP_021162998.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 4818 5270 . - . ID=gene-LDO49_RS13660;Name=LDO49_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13660;old_locus_tag=BCEP4_1860007 NZ_CAJZAV010000097.1 Protein Homology CDS 4818 5270 . - 0 ID=cds-WP_021162997.1;Parent=gene-LDO49_RS13660;Dbxref=GenBank:WP_021162997.1;Name=WP_021162997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898741.1;locus_tag=LDO49_RS13660;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_021162997.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 5452 6492 . + . ID=gene-LDO49_RS13665;Name=LDO49_RS13665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13665;old_locus_tag=BCEP4_1860008 NZ_CAJZAV010000097.1 Protein Homology CDS 5452 6492 . + 0 ID=cds-WP_021162996.1;Parent=gene-LDO49_RS13665;Dbxref=GenBank:WP_021162996.1;Name=WP_021162996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366534.1;locus_tag=LDO49_RS13665;product=bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase;protein_id=WP_021162996.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 6567 8000 . + . ID=gene-LDO49_RS13670;Name=LDO49_RS13670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13670;old_locus_tag=BCEP4_1860009 NZ_CAJZAV010000097.1 Protein Homology CDS 6567 8000 . + 0 ID=cds-WP_060048675.1;Parent=gene-LDO49_RS13670;Dbxref=GenBank:WP_060048675.1;Name=WP_060048675.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339667.1;locus_tag=LDO49_RS13670;product=nicotinate phosphoribosyltransferase;protein_id=WP_060048675.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 8166 9623 . - . ID=gene-LDO49_RS13675;Name=LDO49_RS13675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13675;old_locus_tag=BCEP4_1860010 NZ_CAJZAV010000097.1 Protein Homology CDS 8166 9623 . - 0 ID=cds-WP_021162994.1;Parent=gene-LDO49_RS13675;Dbxref=GenBank:WP_021162994.1;Name=WP_021162994.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396560.1;locus_tag=LDO49_RS13675;product=aminotransferase-like domain-containing protein;protein_id=WP_021162994.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 9750 10637 . + . ID=gene-LDO49_RS13680;Name=LDO49_RS13680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13680;old_locus_tag=BCEP4_1860011 NZ_CAJZAV010000097.1 Protein Homology CDS 9750 10637 . + 0 ID=cds-WP_021162993.1;Parent=gene-LDO49_RS13680;Dbxref=GenBank:WP_021162993.1;Name=WP_021162993.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766260.1;locus_tag=LDO49_RS13680;product=DMT family transporter;protein_id=WP_021162993.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 10696 11064 . - . ID=gene-LDO49_RS13685;Name=LDO49_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13685;old_locus_tag=BCEP4_1860012 NZ_CAJZAV010000097.1 Protein Homology CDS 10696 11064 . - 0 ID=cds-WP_021162992.1;Parent=gene-LDO49_RS13685;Dbxref=GenBank:WP_021162992.1;Name=WP_021162992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354438.1;locus_tag=LDO49_RS13685;product=VOC family protein;protein_id=WP_021162992.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 11142 11843 . + . ID=gene-LDO49_RS13690;Name=LDO49_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13690;old_locus_tag=BCEP4_1860013 NZ_CAJZAV010000097.1 Protein Homology CDS 11142 11843 . + 0 ID=cds-WP_224051891.1;Parent=gene-LDO49_RS13690;Dbxref=GenBank:WP_224051891.1;Name=WP_224051891.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007848739.1;locus_tag=LDO49_RS13690;product=helix-turn-helix transcriptional regulator;protein_id=WP_224051891.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 11890 13128 . - . ID=gene-LDO49_RS13695;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=LDO49_RS13695;old_locus_tag=BCEP4_1860014 NZ_CAJZAV010000097.1 Protein Homology CDS 11890 13128 . - 0 ID=cds-WP_224051892.1;Parent=gene-LDO49_RS13695;Dbxref=GenBank:WP_224051892.1;Name=WP_224051892.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760719.1;locus_tag=LDO49_RS13695;product=diaminopimelate decarboxylase;protein_id=WP_224051892.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 13238 14152 . + . ID=gene-LDO49_RS13700;Name=LDO49_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13700;old_locus_tag=BCEP4_1860015 NZ_CAJZAV010000097.1 Protein Homology CDS 13238 14152 . + 0 ID=cds-WP_021162990.1;Parent=gene-LDO49_RS13700;Dbxref=GenBank:WP_021162990.1;Name=WP_021162990.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760720.1;locus_tag=LDO49_RS13700;product=LysR family transcriptional regulator;protein_id=WP_021162990.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 14216 14815 . + . ID=gene-LDO49_RS13705;Name=LDO49_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13705;old_locus_tag=BCEP4_1860016 NZ_CAJZAV010000097.1 Protein Homology CDS 14216 14815 . + 0 ID=cds-WP_124475230.1;Parent=gene-LDO49_RS13705;Dbxref=GenBank:WP_124475230.1;Name=WP_124475230.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498978.1;locus_tag=LDO49_RS13705;product=GNAT family N-acetyltransferase;protein_id=WP_124475230.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 14929 15501 . - . ID=gene-LDO49_RS13710;Name=LDO49_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13710;old_locus_tag=BCEP4_1860017 NZ_CAJZAV010000097.1 Protein Homology CDS 14929 15501 . - 0 ID=cds-WP_224051893.1;Parent=gene-LDO49_RS13710;Dbxref=GenBank:WP_224051893.1;Name=WP_224051893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760722.1;locus_tag=LDO49_RS13710;product=DUF4142 domain-containing protein;protein_id=WP_224051893.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 15886 16509 . - . ID=gene-LDO49_RS13715;Name=LDO49_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13715;old_locus_tag=BCEP4_1860018 NZ_CAJZAV010000097.1 Protein Homology CDS 15886 16509 . - 0 ID=cds-WP_059485454.1;Parent=gene-LDO49_RS13715;Dbxref=GenBank:WP_059485454.1;Name=WP_059485454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547273.1;locus_tag=LDO49_RS13715;product=HAD hydrolase-like protein;protein_id=WP_059485454.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 16715 17158 . + . ID=gene-LDO49_RS13720;Name=LDO49_RS13720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13720;old_locus_tag=BCEP4_1860019 NZ_CAJZAV010000097.1 Protein Homology CDS 16715 17158 . + 0 ID=cds-WP_027789537.1;Parent=gene-LDO49_RS13720;Dbxref=GenBank:WP_027789537.1;Name=WP_027789537.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760724.1;locus_tag=LDO49_RS13720;product=GNAT family N-acetyltransferase;protein_id=WP_027789537.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 17216 17434 . + . ID=gene-LDO49_RS13725;Name=LDO49_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13725;old_locus_tag=BCEP4_1860020 NZ_CAJZAV010000097.1 Protein Homology CDS 17216 17434 . + 0 ID=cds-WP_006480837.1;Parent=gene-LDO49_RS13725;Dbxref=GenBank:WP_006480837.1;Name=WP_006480837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366505.1;locus_tag=LDO49_RS13725;product=DUF1653 domain-containing protein;protein_id=WP_006480837.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 17520 18731 . - . ID=gene-LDO49_RS13730;Name=LDO49_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13730;old_locus_tag=BCEP4_1860021 NZ_CAJZAV010000097.1 Protein Homology CDS 17520 18731 . - 0 ID=cds-WP_060070438.1;Parent=gene-LDO49_RS13730;Dbxref=GenBank:WP_060070438.1;Name=WP_060070438.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760725.1;locus_tag=LDO49_RS13730;product=winged helix-turn-helix domain-containing protein;protein_id=WP_060070438.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 19113 20501 . - . ID=gene-LDO49_RS13735;Name=LDO49_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13735;old_locus_tag=BCEP4_1860023 NZ_CAJZAV010000097.1 Protein Homology CDS 19113 20501 . - 0 ID=cds-WP_059587018.1;Parent=gene-LDO49_RS13735;Dbxref=GenBank:WP_059587018.1;Name=WP_059587018.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760208.1;locus_tag=LDO49_RS13735;product=MFS transporter;protein_id=WP_059587018.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 20867 22642 . + . ID=gene-LDO49_RS13740;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=LDO49_RS13740;old_locus_tag=BCEP4_1860025 NZ_CAJZAV010000097.1 Protein Homology CDS 20867 22642 . + 0 ID=cds-WP_081067201.1;Parent=gene-LDO49_RS13740;Dbxref=GenBank:WP_081067201.1;Name=WP_081067201.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;gene=treA;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547286.1;locus_tag=LDO49_RS13740;product=alpha%2Calpha-trehalase TreA;protein_id=WP_081067201.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 22719 24100 . - . ID=gene-LDO49_RS13745;Name=LDO49_RS13745;end_range=24100,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13745;old_locus_tag=BCEP4_1860026;partial=true NZ_CAJZAV010000097.1 Protein Homology CDS 22719 24100 . - 2 ID=cds-WP_224051905.1;Parent=gene-LDO49_RS13745;Dbxref=GenBank:WP_224051905.1;Name=WP_224051905.1;end_range=24100,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480848.1;locus_tag=LDO49_RS13745;partial=true;product=carbohydrate porin;protein_id=WP_224051905.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 24111 24339 . - . ID=gene-LDO49_RS13750;Name=LDO49_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13750;old_locus_tag=BCEP4_1860027;partial=true;start_range=.,24111 NZ_CAJZAV010000097.1 Protein Homology CDS 24111 24339 . - 0 ID=cds-WP_224051894.1;Parent=gene-LDO49_RS13750;Dbxref=GenBank:WP_224051894.1;Name=WP_224051894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760205.1;locus_tag=LDO49_RS13750;partial=true;product=hypothetical protein;protein_id=WP_224051894.1;start_range=.,24111;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 25409 25546 . + . ID=gene-LDO49_RS13755;Name=LDO49_RS13755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13755;old_locus_tag=BCEP4_1860031 NZ_CAJZAV010000097.1 Protein Homology CDS 25409 25546 . + 0 ID=cds-WP_021162978.1;Parent=gene-LDO49_RS13755;Dbxref=GenBank:WP_021162978.1;Name=WP_021162978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396574.1;locus_tag=LDO49_RS13755;product=hypothetical protein;protein_id=WP_021162978.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 25663 27309 . + . ID=gene-LDO49_RS13760;Name=LDO49_RS13760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13760;old_locus_tag=BCEP4_1860032 NZ_CAJZAV010000097.1 Protein Homology CDS 25663 27309 . + 0 ID=cds-WP_021162977.1;Parent=gene-LDO49_RS13760;Dbxref=GenBank:WP_021162977.1;Name=WP_021162977.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498988.1;locus_tag=LDO49_RS13760;product=Nramp family divalent metal transporter;protein_id=WP_021162977.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 27437 28342 . - . ID=gene-LDO49_RS13765;Name=LDO49_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13765;old_locus_tag=BCEP4_1860033 NZ_CAJZAV010000097.1 Protein Homology CDS 27437 28342 . - 0 ID=cds-WP_059619453.1;Parent=gene-LDO49_RS13765;Dbxref=GenBank:WP_059619453.1;Name=WP_059619453.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354463.1;locus_tag=LDO49_RS13765;product=helix-turn-helix transcriptional regulator;protein_id=WP_059619453.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 28626 29459 . + . ID=gene-LDO49_RS13770;Name=LDO49_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13770;old_locus_tag=BCEP4_1860034 NZ_CAJZAV010000097.1 Protein Homology CDS 28626 29459 . + 0 ID=cds-WP_042977513.1;Parent=gene-LDO49_RS13770;Dbxref=GenBank:WP_042977513.1;Name=WP_042977513.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354464.1;locus_tag=LDO49_RS13770;product=helix-turn-helix transcriptional regulator;protein_id=WP_042977513.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 29732 31699 . + . ID=gene-LDO49_RS13775;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=LDO49_RS13775;old_locus_tag=BCEP4_1860035 NZ_CAJZAV010000097.1 Protein Homology CDS 29732 31699 . + 0 ID=cds-WP_042977509.1;Parent=gene-LDO49_RS13775;Dbxref=GenBank:WP_042977509.1;Name=WP_042977509.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898780.1;locus_tag=LDO49_RS13775;product=asparagine synthase (glutamine-hydrolyzing);protein_id=WP_042977509.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq pseudogene 31719 31910 . - . ID=gene-LDO49_RS13780;Name=LDO49_RS13780;end_range=31910,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS13780;partial=true;pseudo=true NZ_CAJZAV010000097.1 Protein Homology CDS 31719 31910 . - 0 ID=cds-LDO49_RS13780;Parent=gene-LDO49_RS13780;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=31910,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547306.1;locus_tag=LDO49_RS13780;partial=true;product=lytic transglycosylase;pseudo=true;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 32402 32800 . - . ID=gene-LDO49_RS13785;Name=LDO49_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13785;old_locus_tag=BCEP4_1860037 NZ_CAJZAV010000097.1 Protein Homology CDS 32402 32800 . - 0 ID=cds-WP_021162972.1;Parent=gene-LDO49_RS13785;Dbxref=GenBank:WP_021162972.1;Name=WP_021162972.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754334.1;locus_tag=LDO49_RS13785;product=winged helix-turn-helix domain-containing protein;protein_id=WP_021162972.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 33216 33359 . + . ID=gene-LDO49_RS13790;Name=LDO49_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13790 NZ_CAJZAV010000097.1 GeneMarkS-2+ CDS 33216 33359 . + 0 ID=cds-WP_224051896.1;Parent=gene-LDO49_RS13790;Dbxref=GenBank:WP_224051896.1;Name=WP_224051896.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS13790;product=hypothetical protein;protein_id=WP_224051896.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 33582 35792 . - . ID=gene-LDO49_RS13795;Name=LDO49_RS13795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13795;old_locus_tag=BCEP4_1860038 NZ_CAJZAV010000097.1 Protein Homology CDS 33582 35792 . - 0 ID=cds-WP_060070426.1;Parent=gene-LDO49_RS13795;Dbxref=GenBank:WP_060070426.1;Name=WP_060070426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659201.1;locus_tag=LDO49_RS13795;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=WP_060070426.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 35795 36256 . - . ID=gene-LDO49_RS13800;Name=LDO49_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13800;old_locus_tag=BCEP4_1860039 NZ_CAJZAV010000097.1 Protein Homology CDS 35795 36256 . - 0 ID=cds-WP_021162969.1;Parent=gene-LDO49_RS13800;Dbxref=GenBank:WP_021162969.1;Name=WP_021162969.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017328867.1;locus_tag=LDO49_RS13800;product=(2Fe-2S)-binding protein;protein_id=WP_021162969.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 36438 37361 . + . ID=gene-LDO49_RS13805;Name=LDO49_RS13805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13805;old_locus_tag=BCEP4_1860040 NZ_CAJZAV010000097.1 Protein Homology CDS 36438 37361 . + 0 ID=cds-WP_027789521.1;Parent=gene-LDO49_RS13805;Dbxref=GenBank:WP_027789521.1;Name=WP_027789521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766226.1;locus_tag=LDO49_RS13805;product=AraC family transcriptional regulator;protein_id=WP_027789521.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 37412 40078 . - . ID=gene-LDO49_RS13810;Name=LDO49_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13810;old_locus_tag=BCEP4_1860041 NZ_CAJZAV010000097.1 Protein Homology CDS 37412 40078 . - 0 ID=cds-WP_224051898.1;Parent=gene-LDO49_RS13810;Dbxref=GenBank:WP_224051898.1;Name=WP_224051898.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415620.1;locus_tag=LDO49_RS13810;product=glycosyltransferase;protein_id=WP_224051898.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 40102 41514 . - . ID=gene-LDO49_RS13815;Name=LDO49_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13815;old_locus_tag=BCEP4_1860042 NZ_CAJZAV010000097.1 Protein Homology CDS 40102 41514 . - 0 ID=cds-WP_224051899.1;Parent=gene-LDO49_RS13815;Dbxref=GenBank:WP_224051899.1;Name=WP_224051899.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354473.1;locus_tag=LDO49_RS13815;product=UDP-glucose dehydrogenase family protein;protein_id=WP_224051899.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 41550 42539 . - . ID=gene-LDO49_RS13820;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=LDO49_RS13820;old_locus_tag=BCEP4_1860043 NZ_CAJZAV010000097.1 Protein Homology CDS 41550 42539 . - 0 ID=cds-WP_224051901.1;Parent=gene-LDO49_RS13820;Dbxref=GenBank:WP_224051901.1;Name=WP_224051901.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216620.1;locus_tag=LDO49_RS13820;product=UDP-glucose 4-epimerase GalE;protein_id=WP_224051901.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 42536 43543 . - . ID=gene-LDO49_RS13825;Name=LDO49_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13825;old_locus_tag=BCEP4_1860044 NZ_CAJZAV010000097.1 Protein Homology CDS 42536 43543 . - 0 ID=cds-WP_042977503.1;Parent=gene-LDO49_RS13825;Dbxref=GenBank:WP_042977503.1;Name=WP_042977503.1;Ontology_term=GO:0042732,GO:0048040,GO:0070403;gbkey=CDS;go_function=UDP-glucuronate decarboxylase activity|0048040||IEA,NAD+ binding|0070403||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216621.1;locus_tag=LDO49_RS13825;product=UDP-glucuronic acid decarboxylase family protein;protein_id=WP_042977503.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 43536 43967 . - . ID=gene-LDO49_RS13830;Name=LDO49_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13830;old_locus_tag=BCEP4_1860045 NZ_CAJZAV010000097.1 Protein Homology CDS 43536 43967 . - 0 ID=cds-WP_059485440.1;Parent=gene-LDO49_RS13830;Dbxref=GenBank:WP_059485440.1;Name=WP_059485440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354476.1;locus_tag=LDO49_RS13830;product=hypothetical protein;protein_id=WP_059485440.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 45631 45954 . + . ID=gene-LDO49_RS13835;Name=LDO49_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13835;old_locus_tag=BCEP4_1860047 NZ_CAJZAV010000097.1 Protein Homology CDS 45631 45954 . + 0 ID=cds-WP_021162963.1;Parent=gene-LDO49_RS13835;Dbxref=GenBank:WP_021162963.1;Name=WP_021162963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491010.1;locus_tag=LDO49_RS13835;product=hypothetical protein;protein_id=WP_021162963.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 46066 46656 . + . ID=gene-LDO49_RS13840;Name=LDO49_RS13840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13840;old_locus_tag=BCEP4_1860048 NZ_CAJZAV010000097.1 Protein Homology CDS 46066 46656 . + 0 ID=cds-WP_060323877.1;Parent=gene-LDO49_RS13840;Dbxref=GenBank:WP_060323877.1;Name=WP_060323877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339704.1;locus_tag=LDO49_RS13840;product=hypothetical protein;protein_id=WP_060323877.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 46732 47013 . + . ID=gene-LDO49_RS13845;Name=LDO49_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13845;old_locus_tag=BCEP4_1860050 NZ_CAJZAV010000097.1 Protein Homology CDS 46732 47013 . + 0 ID=cds-WP_011354481.1;Parent=gene-LDO49_RS13845;Dbxref=GenBank:WP_011354481.1;Name=WP_011354481.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547315.1;locus_tag=LDO49_RS13845;product=hypothetical protein;protein_id=WP_011354481.1;transl_table=11 NZ_CAJZAV010000097.1 RefSeq gene 47058 48246 . + . ID=gene-LDO49_RS13850;Name=LDO49_RS13850;end_range=48246,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13850;partial=true NZ_CAJZAV010000097.1 Protein Homology CDS 47058 48246 . + 0 ID=cds-WP_224051903.1;Parent=gene-LDO49_RS13850;Dbxref=GenBank:WP_224051903.1;Name=WP_224051903.1;end_range=48246,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547316.1;locus_tag=LDO49_RS13850;partial=true;product=chemotaxis protein CheA;protein_id=WP_224051903.1;transl_table=11 ##sequence-region NZ_CAJZAV010000098.1 1 5108 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000098.1 RefSeq region 1 5108 . + . ID=NZ_CAJZAV010000098.1:1..5108;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_187 NZ_CAJZAV010000098.1 RefSeq pseudogene 250 385 . - . ID=gene-LDO49_RS13855;Name=LDO49_RS13855;end_range=385,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS13855;partial=true;pseudo=true NZ_CAJZAV010000098.1 Protein Homology CDS 250 385 . - 0 ID=cds-LDO49_RS13855;Parent=gene-LDO49_RS13855;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=385,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003263120.1;locus_tag=LDO49_RS13855;partial=true;product=IS5/IS1182 family transposase;pseudo=true;transl_table=11 NZ_CAJZAV010000098.1 RefSeq gene 442 1176 . + . ID=gene-LDO49_RS13860;Name=LDO49_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13860;old_locus_tag=BCEP4_1870003 NZ_CAJZAV010000098.1 GeneMarkS-2+ CDS 442 1176 . + 0 ID=cds-WP_124476056.1;Parent=gene-LDO49_RS13860;Dbxref=GenBank:WP_124476056.1;Name=WP_124476056.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS13860;product=DUF3841 domain-containing protein;protein_id=WP_124476056.1;transl_table=11 NZ_CAJZAV010000098.1 RefSeq pseudogene 1224 2031 . + . ID=gene-LDO49_RS13865;Name=LDO49_RS13865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS13865;pseudo=true NZ_CAJZAV010000098.1 Protein Homology CDS 1224 2031 . + 0 ID=cds-LDO49_RS13865;Parent=gene-LDO49_RS13865;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011493649.1;locus_tag=LDO49_RS13865;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CAJZAV010000098.1 RefSeq gene 2542 2943 . + . ID=gene-LDO49_RS13870;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LDO49_RS13870 NZ_CAJZAV010000098.1 Protein Homology CDS 2542 2943 . + 0 ID=cds-WP_063812085.1;Parent=gene-LDO49_RS13870;Dbxref=GenBank:WP_063812085.1;Name=WP_063812085.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: protein motif:HMM:NF047595.1;locus_tag=LDO49_RS13870;product=IS66-like element accessory protein TnpA;protein_id=WP_063812085.1;transl_table=11 NZ_CAJZAV010000098.1 RefSeq gene 3011 3316 . + . ID=gene-LDO49_RS13875;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=LDO49_RS13875;old_locus_tag=BCEP4_1870008 NZ_CAJZAV010000098.1 Protein Homology CDS 3011 3316 . + 0 ID=cds-WP_372585844.1;Parent=gene-LDO49_RS13875;Dbxref=GenBank:WP_372585844.1;Name=WP_372585844.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.6;locus_tag=LDO49_RS13875;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_372585844.1;transl_table=11 NZ_CAJZAV010000098.1 RefSeq pseudogene 3260 4015 . - . ID=gene-LDO49_RS13880;Name=LDO49_RS13880;end_range=4015,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS13880;old_locus_tag=BCEP4_1870009;partial=true;pseudo=true NZ_CAJZAV010000098.1 Protein Homology CDS 3260 4015 . - 0 ID=cds-LDO49_RS13880;Parent=gene-LDO49_RS13880;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=4015,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011872570.1;locus_tag=LDO49_RS13880;partial=true;product=IS30 family transposase;pseudo=true;transl_table=11 NZ_CAJZAV010000098.1 RefSeq gene 4065 5108 . + . ID=gene-LDO49_RS13885;Name=LDO49_RS13885;end_range=5108,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13885;partial=true NZ_CAJZAV010000098.1 Protein Homology CDS 4065 5108 . + 0 ID=cds-WP_224051906.1;Parent=gene-LDO49_RS13885;Dbxref=GenBank:WP_224051906.1;Name=WP_224051906.1;Ontology_term=GO:0004803;end_range=5108,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011000219.1;locus_tag=LDO49_RS13885;partial=true;product=IS256 family transposase;protein_id=WP_224051906.1;transl_table=11 ##sequence-region NZ_CAJZAV010000099.1 1 26680 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000099.1 RefSeq region 1 26680 . + . ID=NZ_CAJZAV010000099.1:1..26680;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_188 NZ_CAJZAV010000099.1 RefSeq gene 128 505 . - . ID=gene-LDO49_RS13890;Name=LDO49_RS13890;end_range=505,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13890;old_locus_tag=BCEP4_1880001;partial=true NZ_CAJZAV010000099.1 Protein Homology CDS 128 505 . - 0 ID=cds-WP_224051908.1;Parent=gene-LDO49_RS13890;Dbxref=GenBank:WP_224051908.1;Name=WP_224051908.1;end_range=505,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022094.6;locus_tag=LDO49_RS13890;partial=true;product=curli production assembly/transport protein CsgE;protein_id=WP_224051908.1;transl_table=11 NZ_CAJZAV010000099.1 RefSeq pseudogene 516 762 . - . ID=gene-LDO49_RS38045;Name=LDO49_RS38045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38045;old_locus_tag=BCEP4_1880002;partial=true;pseudo=true;start_range=.,516 NZ_CAJZAV010000099.1 GeneMarkS-2+ CDS 516 762 . - 0 ID=cds-LDO49_RS38045;Parent=gene-LDO49_RS38045;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS38045;partial=true;product=hypothetical protein;pseudo=true;start_range=.,516;transl_table=11 NZ_CAJZAV010000099.1 RefSeq gene 1223 1942 . + . ID=gene-LDO49_RS13895;Name=LDO49_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13895;old_locus_tag=BCEP4_1880003 NZ_CAJZAV010000099.1 Protein Homology CDS 1223 1942 . + 0 ID=cds-WP_060070918.1;Parent=gene-LDO49_RS13895;Dbxref=GenBank:WP_060070918.1;Name=WP_060070918.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694582.1;locus_tag=LDO49_RS13895;product=SDR family oxidoreductase;protein_id=WP_060070918.1;transl_table=11 NZ_CAJZAV010000099.1 RefSeq gene 2160 4118 . + . ID=gene-LDO49_RS13900;Name=LDO49_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13900;old_locus_tag=BCEP4_1880005 NZ_CAJZAV010000099.1 Protein Homology CDS 2160 4118 . + 0 ID=cds-WP_060070921.1;Parent=gene-LDO49_RS13900;Dbxref=GenBank:WP_060070921.1;Name=WP_060070921.1;Ontology_term=GO:0004065,GO:0008081,GO:0046872;gbkey=CDS;go_function=arylsulfatase activity|0004065||IEA,phosphoric diester hydrolase activity|0008081||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397804.1;locus_tag=LDO49_RS13900;product=arylsulfatase;protein_id=WP_060070921.1;transl_table=11 NZ_CAJZAV010000099.1 RefSeq gene 4134 5183 . + . ID=gene-LDO49_RS13905;Name=LDO49_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13905;old_locus_tag=BCEP4_1880006 NZ_CAJZAV010000099.1 Protein Homology CDS 4134 5183 . + 0 ID=cds-WP_060070924.1;Parent=gene-LDO49_RS13905;Dbxref=GenBank:WP_060070924.1;Name=WP_060070924.1;Ontology_term=GO:0016670,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity%2C acting on a sulfur group of donors%2C oxygen as acceptor|0016670||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749633.1;locus_tag=LDO49_RS13905;product=formylglycine-generating enzyme family protein;protein_id=WP_060070924.1;transl_table=11 NZ_CAJZAV010000099.1 RefSeq gene 5180 6016 . + . ID=gene-LDO49_RS13910;Name=LDO49_RS13910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13910;old_locus_tag=BCEP4_1880007 NZ_CAJZAV010000099.1 Protein Homology CDS 5180 6016 . + 0 ID=cds-WP_021161669.1;Parent=gene-LDO49_RS13910;Dbxref=GenBank:WP_021161669.1;Name=WP_021161669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365348.1;locus_tag=LDO49_RS13910;product=MetQ/NlpA family lipoprotein;protein_id=WP_021161669.1;transl_table=11 NZ_CAJZAV010000099.1 RefSeq gene 6010 6996 . + . ID=gene-LDO49_RS13915;Name=LDO49_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13915;old_locus_tag=BCEP4_1880008 NZ_CAJZAV010000099.1 Protein Homology CDS 6010 6996 . + 0 ID=cds-WP_060070927.1;Parent=gene-LDO49_RS13915;Dbxref=GenBank:WP_060070927.1;Name=WP_060070927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694586.1;locus_tag=LDO49_RS13915;product=YkgJ family cysteine cluster protein;protein_id=WP_060070927.1;transl_table=11 NZ_CAJZAV010000099.1 RefSeq gene 7062 7388 . + . ID=gene-LDO49_RS13920;Name=LDO49_RS13920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13920;old_locus_tag=BCEP4_1880009 NZ_CAJZAV010000099.1 Protein Homology CDS 7062 7388 . + 0 ID=cds-WP_060070931.1;Parent=gene-LDO49_RS13920;Dbxref=GenBank:WP_060070931.1;Name=WP_060070931.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760101.1;locus_tag=LDO49_RS13920;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_060070931.1;transl_table=11 NZ_CAJZAV010000099.1 RefSeq gene 7587 9287 . + . ID=gene-LDO49_RS13925;Name=LDO49_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13925;old_locus_tag=BCEP4_1880010 NZ_CAJZAV010000099.1 Protein Homology CDS 7587 9287 . + 0 ID=cds-WP_060070934.1;Parent=gene-LDO49_RS13925;Dbxref=GenBank:WP_060070934.1;Name=WP_060070934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356171.1;locus_tag=LDO49_RS13925;product=hypothetical protein;protein_id=WP_060070934.1;transl_table=11 NZ_CAJZAV010000099.1 RefSeq gene 9376 9636 . - . ID=gene-LDO49_RS13930;Name=LDO49_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13930;old_locus_tag=BCEP4_1880011 NZ_CAJZAV010000099.1 GeneMarkS-2+ CDS 9376 9636 . - 0 ID=cds-WP_224051910.1;Parent=gene-LDO49_RS13930;Dbxref=GenBank:WP_224051910.1;Name=WP_224051910.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS13930;product=hypothetical protein;protein_id=WP_224051910.1;transl_table=11 NZ_CAJZAV010000099.1 RefSeq gene 9700 10632 . - . ID=gene-LDO49_RS13935;Name=LDO49_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13935;old_locus_tag=BCEP4_1880012 NZ_CAJZAV010000099.1 Protein Homology CDS 9700 10632 . - 0 ID=cds-WP_048024376.1;Parent=gene-LDO49_RS13935;Dbxref=GenBank:WP_048024376.1;Name=WP_048024376.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330520.1;locus_tag=LDO49_RS13935;product=LysR family transcriptional regulator;protein_id=WP_048024376.1;transl_table=11 NZ_CAJZAV010000099.1 RefSeq gene 10838 11611 . + . ID=gene-LDO49_RS13940;Name=LDO49_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13940;old_locus_tag=BCEP4_1880013 NZ_CAJZAV010000099.1 Protein Homology CDS 10838 11611 . + 0 ID=cds-WP_060070939.1;Parent=gene-LDO49_RS13940;Dbxref=GenBank:WP_060070939.1;Name=WP_060070939.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694590.1;locus_tag=LDO49_RS13940;product=putative hydro-lyase;protein_id=WP_060070939.1;transl_table=11 NZ_CAJZAV010000099.1 RefSeq gene 11714 13012 . + . ID=gene-LDO49_RS13945;Name=LDO49_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13945;old_locus_tag=BCEP4_1880014 NZ_CAJZAV010000099.1 Protein Homology CDS 11714 13012 . + 0 ID=cds-WP_021161674.1;Parent=gene-LDO49_RS13945;Dbxref=GenBank:WP_021161674.1;Name=WP_021161674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356167.1;locus_tag=LDO49_RS13945;product=MFS transporter;protein_id=WP_021161674.1;transl_table=11 NZ_CAJZAV010000099.1 RefSeq gene 13134 16787 . + . ID=gene-LDO49_RS13950;Name=LDO49_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13950;old_locus_tag=BCEP4_1880015 NZ_CAJZAV010000099.1 Protein Homology CDS 13134 16787 . + 0 ID=cds-WP_060071173.1;Parent=gene-LDO49_RS13950;Dbxref=GenBank:WP_060071173.1;Name=WP_060071173.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749640.1;locus_tag=LDO49_RS13950;product=hydantoinase B/oxoprolinase family protein;protein_id=WP_060071173.1;transl_table=11 NZ_CAJZAV010000099.1 RefSeq gene 17363 19366 . + . ID=gene-LDO49_RS13955;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=LDO49_RS13955;old_locus_tag=BCEP4_1880017 NZ_CAJZAV010000099.1 Protein Homology CDS 17363 19366 . + 0 ID=cds-WP_059488994.1;Parent=gene-LDO49_RS13955;Dbxref=GenBank:WP_059488994.1;Name=WP_059488994.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758253.1;locus_tag=LDO49_RS13955;product=cyclic di-GMP phosphodiesterase;protein_id=WP_059488994.1;transl_table=11 NZ_CAJZAV010000099.1 RefSeq gene 19412 20275 . - . ID=gene-LDO49_RS13960;Name=LDO49_RS13960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13960;old_locus_tag=BCEP4_1880018 NZ_CAJZAV010000099.1 Protein Homology CDS 19412 20275 . - 0 ID=cds-WP_021161677.1;Parent=gene-LDO49_RS13960;Dbxref=GenBank:WP_021161677.1;Name=WP_021161677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397815.1;locus_tag=LDO49_RS13960;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_021161677.1;transl_table=11 NZ_CAJZAV010000099.1 RefSeq gene 20898 21122 . + . ID=gene-LDO49_RS13965;Name=LDO49_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13965;old_locus_tag=BCEP4_1880020 NZ_CAJZAV010000099.1 GeneMarkS-2+ CDS 20898 21122 . + 0 ID=cds-WP_060070941.1;Parent=gene-LDO49_RS13965;Dbxref=GenBank:WP_060070941.1;Name=WP_060070941.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS13965;product=hypothetical protein;protein_id=WP_060070941.1;transl_table=11 NZ_CAJZAV010000099.1 RefSeq pseudogene 21133 21711 . + . ID=gene-LDO49_RS13970;Name=LDO49_RS13970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS13970;old_locus_tag=BCEP4_1880021;partial=true;pseudo=true;start_range=.,21133 NZ_CAJZAV010000099.1 Protein Homology CDS 21133 21711 . + 0 ID=cds-LDO49_RS13970;Parent=gene-LDO49_RS13970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010112116.1;locus_tag=LDO49_RS13970;partial=true;product=amino acid transporter;pseudo=true;start_range=.,21133;transl_table=11 NZ_CAJZAV010000099.1 RefSeq gene 21782 21940 . - . ID=gene-LDO49_RS13975;Name=LDO49_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13975 NZ_CAJZAV010000099.1 GeneMarkS-2+ CDS 21782 21940 . - 0 ID=cds-WP_021161679.1;Parent=gene-LDO49_RS13975;Dbxref=GenBank:WP_021161679.1;Name=WP_021161679.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS13975;product=hypothetical protein;protein_id=WP_021161679.1;transl_table=11 NZ_CAJZAV010000099.1 RefSeq gene 22127 24043 . + . ID=gene-LDO49_RS13980;Name=LDO49_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13980;old_locus_tag=BCEP4_1880022 NZ_CAJZAV010000099.1 Protein Homology CDS 22127 24043 . + 0 ID=cds-WP_124474935.1;Parent=gene-LDO49_RS13980;Dbxref=GenBank:WP_124474935.1;Name=WP_124474935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010096696.1;locus_tag=LDO49_RS13980;product=DUF3857 domain-containing transglutaminase family protein;protein_id=WP_124474935.1;transl_table=11 NZ_CAJZAV010000099.1 RefSeq gene 24114 24281 . + . ID=gene-LDO49_RS13985;Name=LDO49_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13985;old_locus_tag=BCEP4_1880023 NZ_CAJZAV010000099.1 Protein Homology CDS 24114 24281 . + 0 ID=cds-WP_021161681.1;Parent=gene-LDO49_RS13985;Dbxref=GenBank:WP_021161681.1;Name=WP_021161681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749649.1;locus_tag=LDO49_RS13985;product=hypothetical protein;protein_id=WP_021161681.1;transl_table=11 NZ_CAJZAV010000099.1 RefSeq gene 24385 25434 . - . ID=gene-LDO49_RS13990;Name=LDO49_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13990;old_locus_tag=BCEP4_1880024 NZ_CAJZAV010000099.1 Protein Homology CDS 24385 25434 . - 0 ID=cds-WP_021161682.1;Parent=gene-LDO49_RS13990;Dbxref=GenBank:WP_021161682.1;Name=WP_021161682.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694597.1;locus_tag=LDO49_RS13990;product=AraC family transcriptional regulator;protein_id=WP_021161682.1;transl_table=11 NZ_CAJZAV010000099.1 RefSeq gene 25505 26680 . + . ID=gene-LDO49_RS13995;Name=LDO49_RS13995;end_range=26680,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS13995;partial=true NZ_CAJZAV010000099.1 Protein Homology CDS 25505 26680 . + 0 ID=cds-WP_224051911.1;Parent=gene-LDO49_RS13995;Dbxref=GenBank:WP_224051911.1;Name=WP_224051911.1;Ontology_term=GO:0055085,GO:0022857;end_range=26680,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881374.1;locus_tag=LDO49_RS13995;partial=true;product=MFS transporter;protein_id=WP_224051911.1;transl_table=11 ##sequence-region NZ_CAJZAV010000100.1 1 12060 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000100.1 RefSeq region 1 12060 . + . ID=NZ_CAJZAV010000100.1:1..12060;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_189 NZ_CAJZAV010000100.1 RefSeq gene 81 1418 . - . ID=gene-LDO49_RS14000;Name=LDO49_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14000;old_locus_tag=BCEP4_1890001 NZ_CAJZAV010000100.1 Protein Homology CDS 81 1418 . - 0 ID=cds-WP_027786942.1;Parent=gene-LDO49_RS14000;Dbxref=GenBank:WP_027786942.1;Name=WP_027786942.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524,GO:0046872;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657410.1;locus_tag=LDO49_RS14000;product=glutamine synthetase family protein;protein_id=WP_027786942.1;transl_table=11 NZ_CAJZAV010000100.1 RefSeq gene 1431 2237 . - . ID=gene-LDO49_RS14005;Name=LDO49_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14005;old_locus_tag=BCEP4_1890002 NZ_CAJZAV010000100.1 Protein Homology CDS 1431 2237 . - 0 ID=cds-WP_124844429.1;Parent=gene-LDO49_RS14005;Dbxref=GenBank:WP_124844429.1;Name=WP_124844429.1;Ontology_term=GO:0016787,GO:0016811;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497798.1;locus_tag=LDO49_RS14005;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_124844429.1;transl_table=11 NZ_CAJZAV010000100.1 RefSeq gene 2992 3789 . - . ID=gene-LDO49_RS14010;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=LDO49_RS14010;old_locus_tag=BCEP4_1890003 NZ_CAJZAV010000100.1 Protein Homology CDS 2992 3789 . - 0 ID=cds-WP_048026187.1;Parent=gene-LDO49_RS14010;Dbxref=GenBank:WP_048026187.1;Name=WP_048026187.1;Ontology_term=GO:0019557,GO:0050129;gbkey=CDS;gene=hutG;go_function=N-formylglutamate deformylase activity|0050129||IEA;go_process=L-histidine catabolic process to glutamate and formate|0019557||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352604.1;locus_tag=LDO49_RS14010;product=N-formylglutamate deformylase;protein_id=WP_048026187.1;transl_table=11 NZ_CAJZAV010000100.1 RefSeq gene 3850 5226 . - . ID=gene-LDO49_RS14015;Name=LDO49_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14015;old_locus_tag=BCEP4_1890004 NZ_CAJZAV010000100.1 Protein Homology CDS 3850 5226 . - 0 ID=cds-WP_059486407.1;Parent=gene-LDO49_RS14015;Dbxref=GenBank:WP_059486407.1;Name=WP_059486407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488097.1;locus_tag=LDO49_RS14015;product=formimidoylglutamate deiminase;protein_id=WP_059486407.1;transl_table=11 NZ_CAJZAV010000100.1 RefSeq gene 5235 6458 . - . ID=gene-LDO49_RS14020;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=LDO49_RS14020;old_locus_tag=BCEP4_1890005 NZ_CAJZAV010000100.1 Protein Homology CDS 5235 6458 . - 0 ID=cds-WP_059587938.1;Parent=gene-LDO49_RS14020;Dbxref=GenBank:WP_059587938.1;Name=WP_059587938.1;Ontology_term=GO:0019556,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488078.1;locus_tag=LDO49_RS14020;product=imidazolonepropionase;protein_id=WP_059587938.1;transl_table=11 NZ_CAJZAV010000100.1 RefSeq gene 6463 7101 . - . ID=gene-LDO49_RS14025;Name=LDO49_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14025;old_locus_tag=BCEP4_1890006 NZ_CAJZAV010000100.1 Protein Homology CDS 6463 7101 . - 0 ID=cds-WP_060070580.1;Parent=gene-LDO49_RS14025;Dbxref=GenBank:WP_060070580.1;Name=WP_060070580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328849.1;locus_tag=LDO49_RS14025;product=HutD/Ves family protein;protein_id=WP_060070580.1;transl_table=11 NZ_CAJZAV010000100.1 RefSeq gene 7104 8792 . - . ID=gene-LDO49_RS14030;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=LDO49_RS14030;old_locus_tag=BCEP4_1890007 NZ_CAJZAV010000100.1 Protein Homology CDS 7104 8792 . - 0 ID=cds-WP_027786936.1;Parent=gene-LDO49_RS14030;Dbxref=GenBank:WP_027786936.1;Name=WP_027786936.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600548.1;locus_tag=LDO49_RS14030;product=urocanate hydratase;protein_id=WP_027786936.1;transl_table=11 NZ_CAJZAV010000100.1 RefSeq gene 8831 9526 . - . ID=gene-LDO49_RS14035;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=LDO49_RS14035;old_locus_tag=BCEP4_1890008 NZ_CAJZAV010000100.1 Protein Homology CDS 8831 9526 . - 0 ID=cds-WP_027786935.1;Parent=gene-LDO49_RS14035;Dbxref=GenBank:WP_027786935.1;Name=WP_027786935.1;Ontology_term=GO:0006355,GO:0006547,GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-histidine metabolic process|0006547||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010116292.1;locus_tag=LDO49_RS14035;product=histidine utilization repressor;protein_id=WP_027786935.1;transl_table=11 NZ_CAJZAV010000100.1 RefSeq gene 9531 11054 . - . ID=gene-LDO49_RS14040;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=LDO49_RS14040;old_locus_tag=BCEP4_1890009 NZ_CAJZAV010000100.1 Protein Homology CDS 9531 11054 . - 0 ID=cds-WP_059486414.1;Parent=gene-LDO49_RS14040;Dbxref=GenBank:WP_059486414.1;Name=WP_059486414.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657420.1;locus_tag=LDO49_RS14040;product=histidine ammonia-lyase;protein_id=WP_059486414.1;transl_table=11 NZ_CAJZAV010000100.1 RefSeq gene 11268 12060 . + . ID=gene-LDO49_RS14045;Name=LDO49_RS14045;end_range=12060,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14045;partial=true NZ_CAJZAV010000100.1 Protein Homology CDS 11268 12060 . + 0 ID=cds-WP_224051912.1;Parent=gene-LDO49_RS14045;Dbxref=GenBank:WP_224051912.1;Name=WP_224051912.1;end_range=12060,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478340.1;locus_tag=LDO49_RS14045;partial=true;product=transporter substrate-binding domain-containing protein;protein_id=WP_224051912.1;transl_table=11 ##sequence-region NZ_CAJZAV010000101.1 1 29800 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000101.1 RefSeq region 1 29800 . + . ID=NZ_CAJZAV010000101.1:1..29800;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_19 NZ_CAJZAV010000101.1 RefSeq gene 1 286 . - . ID=gene-LDO49_RS14050;Name=LDO49_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14050;partial=true;start_range=.,1 NZ_CAJZAV010000101.1 Protein Homology CDS 1 286 . - 0 ID=cds-WP_224051913.1;Parent=gene-LDO49_RS14050;Dbxref=GenBank:WP_224051913.1;Name=WP_224051913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494399.1;locus_tag=LDO49_RS14050;partial=true;product=DUF3761 domain-containing protein;protein_id=WP_224051913.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 393 1310 . - . ID=gene-LDO49_RS14055;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=LDO49_RS14055;old_locus_tag=BCEP4_190002 NZ_CAJZAV010000101.1 Protein Homology CDS 393 1310 . - 0 ID=cds-WP_027788483.1;Parent=gene-LDO49_RS14055;Dbxref=GenBank:WP_027788483.1;Name=WP_027788483.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=gcvA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655858.1;locus_tag=LDO49_RS14055;product=transcriptional regulator GcvA;protein_id=WP_027788483.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 1504 2820 . + . ID=gene-LDO49_RS14060;Name=LDO49_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14060;old_locus_tag=BCEP4_190003 NZ_CAJZAV010000101.1 Protein Homology CDS 1504 2820 . + 0 ID=cds-WP_224051914.1;Parent=gene-LDO49_RS14060;Dbxref=GenBank:WP_224051914.1;Name=WP_224051914.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327827.1;locus_tag=LDO49_RS14060;product=MFS transporter;protein_id=WP_224051914.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 2902 3246 . + . ID=gene-LDO49_RS14065;Name=LDO49_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14065;old_locus_tag=BCEP4_190004 NZ_CAJZAV010000101.1 Protein Homology CDS 2902 3246 . + 0 ID=cds-WP_224051915.1;Parent=gene-LDO49_RS14065;Dbxref=GenBank:WP_224051915.1;Name=WP_224051915.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752681.1;locus_tag=LDO49_RS14065;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_224051915.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 3659 5050 . + . ID=gene-LDO49_RS14070;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=LDO49_RS14070;old_locus_tag=BCEP4_190005 NZ_CAJZAV010000101.1 Protein Homology CDS 3659 5050 . + 0 ID=cds-WP_021156961.1;Parent=gene-LDO49_RS14070;Dbxref=GenBank:WP_021156961.1;Name=WP_021156961.1;Ontology_term=GO:0015812,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=gamma-aminobutyric acid transport|0015812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898219.1;locus_tag=LDO49_RS14070;product=GABA permease;protein_id=WP_021156961.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 5486 6295 . + . ID=gene-LDO49_RS14075;Name=LDO49_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14075;old_locus_tag=BCEP4_190006 NZ_CAJZAV010000101.1 Protein Homology CDS 5486 6295 . + 0 ID=cds-WP_063800693.1;Parent=gene-LDO49_RS14075;Dbxref=GenBank:WP_063800693.1;Name=WP_063800693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008248895.1;locus_tag=LDO49_RS14075;product=alpha/beta hydrolase family protein;protein_id=WP_063800693.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 6335 7396 . + . ID=gene-LDO49_RS14080;Name=LDO49_RS14080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14080;old_locus_tag=BCEP4_190007 NZ_CAJZAV010000101.1 Protein Homology CDS 6335 7396 . + 0 ID=cds-WP_224051917.1;Parent=gene-LDO49_RS14080;Dbxref=GenBank:WP_224051917.1;Name=WP_224051917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214207.1;locus_tag=LDO49_RS14080;product=radical SAM protein;protein_id=WP_224051917.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 7470 8564 . - . ID=gene-LDO49_RS14085;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=LDO49_RS14085;old_locus_tag=BCEP4_190008 NZ_CAJZAV010000101.1 Protein Homology CDS 7470 8564 . - 0 ID=cds-WP_059486477.1;Parent=gene-LDO49_RS14085;Dbxref=GenBank:WP_059486477.1;Name=WP_059486477.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477050.1;locus_tag=LDO49_RS14085;product=redox-regulated ATPase YchF;protein_id=WP_059486477.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 8812 9990 . + . ID=gene-LDO49_RS14090;Name=LDO49_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14090;old_locus_tag=BCEP4_190009 NZ_CAJZAV010000101.1 Protein Homology CDS 8812 9990 . + 0 ID=cds-WP_060070326.1;Parent=gene-LDO49_RS14090;Dbxref=GenBank:WP_060070326.1;Name=WP_060070326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214205.1;locus_tag=LDO49_RS14090;product=UbiH/UbiF family hydroxylase;protein_id=WP_060070326.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 10081 10809 . + . ID=gene-LDO49_RS14095;Name=LDO49_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14095;old_locus_tag=BCEP4_190010 NZ_CAJZAV010000101.1 Protein Homology CDS 10081 10809 . + 0 ID=cds-WP_021156966.1;Parent=gene-LDO49_RS14095;Dbxref=GenBank:WP_021156966.1;Name=WP_021156966.1;Ontology_term=GO:0003756;gbkey=CDS;go_function=protein disulfide isomerase activity|0003756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758486.1;locus_tag=LDO49_RS14095;product=DsbC family protein;protein_id=WP_021156966.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 10916 12715 . + . ID=gene-LDO49_RS14100;Name=LDO49_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14100;old_locus_tag=BCEP4_190011 NZ_CAJZAV010000101.1 Protein Homology CDS 10916 12715 . + 0 ID=cds-WP_060070329.1;Parent=gene-LDO49_RS14100;Dbxref=GenBank:WP_060070329.1;Name=WP_060070329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350810.1;locus_tag=LDO49_RS14100;product=M61 family metallopeptidase;protein_id=WP_060070329.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 12863 13459 . + . ID=gene-LDO49_RS14105;Name=LDO49_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14105;old_locus_tag=BCEP4_190012 NZ_CAJZAV010000101.1 Protein Homology CDS 12863 13459 . + 0 ID=cds-WP_048026373.1;Parent=gene-LDO49_RS14105;Dbxref=GenBank:WP_048026373.1;Name=WP_048026373.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0016491,GO:0050136,GO:0050446;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363006.1;locus_tag=LDO49_RS14105;product=FMN-dependent NADH-azoreductase;protein_id=WP_048026373.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 13575 14480 . - . ID=gene-LDO49_RS14110;Name=LDO49_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14110;old_locus_tag=BCEP4_190013 NZ_CAJZAV010000101.1 Protein Homology CDS 13575 14480 . - 0 ID=cds-WP_021156969.1;Parent=gene-LDO49_RS14110;Dbxref=GenBank:WP_021156969.1;Name=WP_021156969.1;Ontology_term=GO:0006281,GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363007.1;locus_tag=LDO49_RS14110;product=uracil-DNA glycosylase;protein_id=WP_021156969.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 14493 15119 . - . ID=gene-LDO49_RS14115;Name=LDO49_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14115;old_locus_tag=BCEP4_190014 NZ_CAJZAV010000101.1 Protein Homology CDS 14493 15119 . - 0 ID=cds-WP_048026371.1;Parent=gene-LDO49_RS14115;Dbxref=GenBank:WP_048026371.1;Name=WP_048026371.1;Ontology_term=GO:0046872,GO:0050355;gbkey=CDS;go_function=metal ion binding|0046872||IEA,inorganic triphosphate phosphatase activity|0050355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363008.1;locus_tag=LDO49_RS14115;product=CYTH domain-containing protein;protein_id=WP_048026371.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 15119 15904 . - . ID=gene-LDO49_RS14120;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=LDO49_RS14120;old_locus_tag=BCEP4_190015 NZ_CAJZAV010000101.1 Protein Homology CDS 15119 15904 . - 0 ID=cds-WP_027788473.1;Parent=gene-LDO49_RS14120;Dbxref=GenBank:WP_027788473.1;Name=WP_027788473.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106662.1;locus_tag=LDO49_RS14120;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_027788473.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 15934 16965 . - . ID=gene-LDO49_RS14125;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=LDO49_RS14125;old_locus_tag=BCEP4_190016 NZ_CAJZAV010000101.1 Protein Homology CDS 15934 16965 . - 0 ID=cds-WP_027788472.1;Parent=gene-LDO49_RS14125;Dbxref=GenBank:WP_027788472.1;Name=WP_027788472.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406908.1;locus_tag=LDO49_RS14125;product=anthranilate phosphoribosyltransferase;protein_id=WP_027788472.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 16979 17569 . - . ID=gene-LDO49_RS14130;Name=LDO49_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14130;old_locus_tag=BCEP4_190017 NZ_CAJZAV010000101.1 Protein Homology CDS 16979 17569 . - 0 ID=cds-WP_059554485.1;Parent=gene-LDO49_RS14130;Dbxref=GenBank:WP_059554485.1;Name=WP_059554485.1;Ontology_term=GO:0000162,GO:0004049,GO:0046820;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA,4-amino-4-deoxychorismate synthase activity|0046820||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909895.1;locus_tag=LDO49_RS14130;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_059554485.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 17583 19076 . - . ID=gene-LDO49_RS14135;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=LDO49_RS14135;old_locus_tag=BCEP4_190018 NZ_CAJZAV010000101.1 Protein Homology CDS 17583 19076 . - 0 ID=cds-WP_042973047.1;Parent=gene-LDO49_RS14135;Dbxref=GenBank:WP_042973047.1;Name=WP_042973047.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020070700.1;locus_tag=LDO49_RS14135;product=anthranilate synthase component I;protein_id=WP_042973047.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 19434 20198 . - . ID=gene-LDO49_RS14140;Name=LDO49_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14140;old_locus_tag=BCEP4_190020 NZ_CAJZAV010000101.1 Protein Homology CDS 19434 20198 . - 0 ID=cds-WP_060070333.1;Parent=gene-LDO49_RS14140;Dbxref=GenBank:WP_060070333.1;Name=WP_060070333.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655874.1;locus_tag=LDO49_RS14140;product=phosphoglycolate phosphatase;protein_id=WP_060070333.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 20203 20889 . - . ID=gene-LDO49_RS14145;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=LDO49_RS14145;old_locus_tag=BCEP4_190021 NZ_CAJZAV010000101.1 Protein Homology CDS 20203 20889 . - 0 ID=cds-WP_011883156.1;Parent=gene-LDO49_RS14145;Dbxref=GenBank:WP_011883156.1;Name=WP_011883156.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883156.1;locus_tag=LDO49_RS14145;product=ribulose-phosphate 3-epimerase;protein_id=WP_011883156.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 21068 21442 . + . ID=gene-LDO49_RS14150;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=LDO49_RS14150;old_locus_tag=BCEP4_190022 NZ_CAJZAV010000101.1 Protein Homology CDS 21068 21442 . + 0 ID=cds-WP_011350820.1;Parent=gene-LDO49_RS14150;Dbxref=GenBank:WP_011350820.1;Name=WP_011350820.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186878.1;locus_tag=LDO49_RS14150;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_011350820.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 21524 22756 . + . ID=gene-LDO49_RS14155;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=LDO49_RS14155;old_locus_tag=BCEP4_190023 NZ_CAJZAV010000101.1 Protein Homology CDS 21524 22756 . + 0 ID=cds-WP_048026376.1;Parent=gene-LDO49_RS14155;Dbxref=GenBank:WP_048026376.1;Name=WP_048026376.1;Ontology_term=GO:0000270,GO:0008933,GO:0030288;gbkey=CDS;gene=mltA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327838.1;locus_tag=LDO49_RS14155;product=murein transglycosylase A;protein_id=WP_048026376.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 23003 24301 . - . ID=gene-LDO49_RS14160;Name=paaK;gbkey=Gene;gene=paaK;gene_biotype=protein_coding;locus_tag=LDO49_RS14160;old_locus_tag=BCEP4_190024 NZ_CAJZAV010000101.1 Protein Homology CDS 23003 24301 . - 0 ID=cds-WP_021156976.1;Parent=gene-LDO49_RS14160;Dbxref=GenBank:WP_021156976.1;Name=WP_021156976.1;Ontology_term=GO:0010124,GO:0047475;gbkey=CDS;gene=paaK;go_function=phenylacetate-CoA ligase activity|0047475||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898201.1;locus_tag=LDO49_RS14160;product=phenylacetate--CoA ligase PaaK;protein_id=WP_021156976.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 24340 24792 . - . ID=gene-LDO49_RS14165;Name=paaI;gbkey=Gene;gene=paaI;gene_biotype=protein_coding;locus_tag=LDO49_RS14165;old_locus_tag=BCEP4_190025 NZ_CAJZAV010000101.1 Protein Homology CDS 24340 24792 . - 0 ID=cds-WP_048026362.1;Parent=gene-LDO49_RS14165;Dbxref=GenBank:WP_048026362.1;Name=WP_048026362.1;Ontology_term=GO:0010124,GO:0016790;gbkey=CDS;gene=paaI;go_function=thiolester hydrolase activity|0016790||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350823.1;locus_tag=LDO49_RS14165;product=hydroxyphenylacetyl-CoA thioesterase PaaI;protein_id=WP_048026362.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 24794 25585 . - . ID=gene-LDO49_RS14170;Name=paaG;gbkey=Gene;gene=paaG;gene_biotype=protein_coding;locus_tag=LDO49_RS14170;old_locus_tag=BCEP4_190026 NZ_CAJZAV010000101.1 Protein Homology CDS 24794 25585 . - 0 ID=cds-WP_021156977.1;Parent=gene-LDO49_RS14170;Dbxref=GenBank:WP_021156977.1;Name=WP_021156977.1;Ontology_term=GO:0010124,GO:0016853;gbkey=CDS;gene=paaG;go_function=isomerase activity|0016853||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029796.1;locus_tag=LDO49_RS14170;product=2-(1%2C2-epoxy-1%2C2-dihydrophenyl)acetyl-CoA isomerase PaaG;protein_id=WP_021156977.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 25631 26833 . - . ID=gene-LDO49_RS14175;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;locus_tag=LDO49_RS14175;old_locus_tag=BCEP4_190028 NZ_CAJZAV010000101.1 Protein Homology CDS 25631 26833 . - 0 ID=cds-WP_060070337.1;Parent=gene-LDO49_RS14175;Dbxref=GenBank:WP_060070337.1;Name=WP_060070337.1;Ontology_term=GO:0019619,GO:0016747;gbkey=CDS;gene=pcaF;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197326.1;locus_tag=LDO49_RS14175;product=3-oxoadipyl-CoA thiolase;protein_id=WP_060070337.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 26921 28627 . - . ID=gene-LDO49_RS14180;Name=paaN;gbkey=Gene;gene=paaN;gene_biotype=protein_coding;locus_tag=LDO49_RS14180;old_locus_tag=BCEP4_190029 NZ_CAJZAV010000101.1 Protein Homology CDS 26921 28627 . - 0 ID=cds-WP_059498652.1;Parent=gene-LDO49_RS14180;Dbxref=GenBank:WP_059498652.1;Name=WP_059498652.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaN;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522008.1;locus_tag=LDO49_RS14180;product=phenylacetic acid degradation protein PaaN;protein_id=WP_059498652.1;transl_table=11 NZ_CAJZAV010000101.1 RefSeq gene 28757 29533 . + . ID=gene-LDO49_RS14185;Name=LDO49_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14185;old_locus_tag=BCEP4_190030 NZ_CAJZAV010000101.1 Protein Homology CDS 28757 29533 . + 0 ID=cds-WP_021156980.1;Parent=gene-LDO49_RS14185;Dbxref=GenBank:WP_021156980.1;Name=WP_021156980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008918651.1;locus_tag=LDO49_RS14185;product=enoyl-CoA hydratase;protein_id=WP_021156980.1;transl_table=11 ##sequence-region NZ_CAJZAV010000102.1 1 3664 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000102.1 RefSeq region 1 3664 . + . ID=NZ_CAJZAV010000102.1:1..3664;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_190 NZ_CAJZAV010000102.1 RefSeq gene 1 738 . - . ID=gene-LDO49_RS14190;Name=LDO49_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14190;partial=true;start_range=.,1 NZ_CAJZAV010000102.1 Protein Homology CDS 1 738 . - 0 ID=cds-WP_224051918.1;Parent=gene-LDO49_RS14190;Dbxref=GenBank:WP_224051918.1;Name=WP_224051918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538828.1;locus_tag=LDO49_RS14190;partial=true;product=DUF1254 domain-containing protein;protein_id=WP_224051918.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000102.1 RefSeq gene 1181 1504 . + . ID=gene-LDO49_RS14195;Name=LDO49_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14195;old_locus_tag=BCEP4_1900002 NZ_CAJZAV010000102.1 Protein Homology CDS 1181 1504 . + 0 ID=cds-WP_060074480.1;Parent=gene-LDO49_RS14195;Dbxref=GenBank:WP_060074480.1;Name=WP_060074480.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491388.1;locus_tag=LDO49_RS14195;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_060074480.1;transl_table=11 NZ_CAJZAV010000102.1 RefSeq gene 1688 3664 . + . ID=gene-LDO49_RS14200;Name=LDO49_RS14200;end_range=3664,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14200;partial=true NZ_CAJZAV010000102.1 Protein Homology CDS 1688 3664 . + 0 ID=cds-WP_224051919.1;Parent=gene-LDO49_RS14200;Dbxref=GenBank:WP_224051919.1;Name=WP_224051919.1;Ontology_term=GO:0005507;end_range=3664,.;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480341.1;locus_tag=LDO49_RS14200;partial=true;product=heavy metal translocating P-type ATPase;protein_id=WP_224051919.1;transl_table=11 ##sequence-region NZ_CAJZAV010000103.1 1 16754 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000103.1 RefSeq region 1 16754 . + . ID=NZ_CAJZAV010000103.1:1..16754;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_191 NZ_CAJZAV010000103.1 RefSeq gene 1 312 . - . ID=gene-LDO49_RS14205;Name=LDO49_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14205;partial=true;start_range=.,1 NZ_CAJZAV010000103.1 Protein Homology CDS 1 312 . - 0 ID=cds-WP_224051920.1;Parent=gene-LDO49_RS14205;Dbxref=GenBank:WP_224051920.1;Name=WP_224051920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494064.1;locus_tag=LDO49_RS14205;partial=true;product=VOC family protein;protein_id=WP_224051920.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000103.1 RefSeq gene 543 2003 . + . ID=gene-LDO49_RS14210;Name=LDO49_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14210;old_locus_tag=BCEP4_1910002 NZ_CAJZAV010000103.1 Protein Homology CDS 543 2003 . + 0 ID=cds-WP_021158544.1;Parent=gene-LDO49_RS14210;Dbxref=GenBank:WP_021158544.1;Name=WP_021158544.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533687.1;locus_tag=LDO49_RS14210;product=aminotransferase-like domain-containing protein;protein_id=WP_021158544.1;transl_table=11 NZ_CAJZAV010000103.1 RefSeq gene 2158 4056 . + . ID=gene-LDO49_RS14215;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=LDO49_RS14215;old_locus_tag=BCEP4_1910003 NZ_CAJZAV010000103.1 Protein Homology CDS 2158 4056 . + 0 ID=cds-WP_224051921.1;Parent=gene-LDO49_RS14215;Dbxref=GenBank:WP_224051921.1;Name=WP_224051921.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102343.1;locus_tag=LDO49_RS14215;product=molecular chaperone HtpG;protein_id=WP_224051921.1;transl_table=11 NZ_CAJZAV010000103.1 RefSeq gene 4065 4664 . + . ID=gene-LDO49_RS14220;Name=LDO49_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14220;old_locus_tag=BCEP4_1910004 NZ_CAJZAV010000103.1 Protein Homology CDS 4065 4664 . + 0 ID=cds-WP_042974122.1;Parent=gene-LDO49_RS14220;Dbxref=GenBank:WP_042974122.1;Name=WP_042974122.1;Ontology_term=GO:0006744,GO:0008813,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=chorismate lyase activity|0008813||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328957.1;locus_tag=LDO49_RS14220;product=chorismate--pyruvate lyase family protein;protein_id=WP_042974122.1;transl_table=11 NZ_CAJZAV010000103.1 RefSeq gene 4664 5140 . + . ID=gene-LDO49_RS14225;Name=LDO49_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14225;old_locus_tag=BCEP4_1910005 NZ_CAJZAV010000103.1 Protein Homology CDS 4664 5140 . + 0 ID=cds-WP_021158548.1;Parent=gene-LDO49_RS14225;Dbxref=GenBank:WP_021158548.1;Name=WP_021158548.1;Ontology_term=GO:0006285,GO:0033958;gbkey=CDS;go_function=DNA-deoxyinosine glycosylase activity|0033958||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752866.1;locus_tag=LDO49_RS14225;product=DNA-deoxyinosine glycosylase;protein_id=WP_021158548.1;transl_table=11 NZ_CAJZAV010000103.1 RefSeq gene 5158 5511 . - . ID=gene-LDO49_RS14230;Name=LDO49_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14230;old_locus_tag=BCEP4_1910006 NZ_CAJZAV010000103.1 Protein Homology CDS 5158 5511 . - 0 ID=cds-WP_060072192.1;Parent=gene-LDO49_RS14230;Dbxref=GenBank:WP_060072192.1;Name=WP_060072192.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762839.1;locus_tag=LDO49_RS14230;product=helix-turn-helix domain-containing protein;protein_id=WP_060072192.1;transl_table=11 NZ_CAJZAV010000103.1 RefSeq gene 5757 6011 . - . ID=gene-LDO49_RS14235;Name=LDO49_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14235;old_locus_tag=BCEP4_1910007 NZ_CAJZAV010000103.1 Protein Homology CDS 5757 6011 . - 0 ID=cds-WP_021158550.1;Parent=gene-LDO49_RS14235;Dbxref=GenBank:WP_021158550.1;Name=WP_021158550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478183.1;locus_tag=LDO49_RS14235;product=hypothetical protein;protein_id=WP_021158550.1;transl_table=11 NZ_CAJZAV010000103.1 RefSeq gene 6155 7072 . + . ID=gene-LDO49_RS14240;Name=LDO49_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14240;old_locus_tag=BCEP4_1910008 NZ_CAJZAV010000103.1 Protein Homology CDS 6155 7072 . + 0 ID=cds-WP_021158551.1;Parent=gene-LDO49_RS14240;Dbxref=GenBank:WP_021158551.1;Name=WP_021158551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526403.1;locus_tag=LDO49_RS14240;product=spermidine synthase-like protein;protein_id=WP_021158551.1;transl_table=11 NZ_CAJZAV010000103.1 RefSeq gene 7271 7513 . + . ID=gene-LDO49_RS14245;Name=LDO49_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14245;old_locus_tag=BCEP4_1910009 NZ_CAJZAV010000103.1 Protein Homology CDS 7271 7513 . + 0 ID=cds-WP_021158552.1;Parent=gene-LDO49_RS14245;Dbxref=GenBank:WP_021158552.1;Name=WP_021158552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102349.1;locus_tag=LDO49_RS14245;product=DUF3311 domain-containing protein;protein_id=WP_021158552.1;transl_table=11 NZ_CAJZAV010000103.1 RefSeq gene 7510 9060 . + . ID=gene-LDO49_RS14250;Name=mctP;gbkey=Gene;gene=mctP;gene_biotype=protein_coding;locus_tag=LDO49_RS14250;old_locus_tag=BCEP4_1910010 NZ_CAJZAV010000103.1 Protein Homology CDS 7510 9060 . + 0 ID=cds-WP_060072139.1;Parent=gene-LDO49_RS14250;Dbxref=GenBank:WP_060072139.1;Name=WP_060072139.1;Ontology_term=GO:0006848,GO:0015293;gbkey=CDS;gene=mctP;go_function=symporter activity|0015293||IEA;go_process=pyruvate transport|0006848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896416.1;locus_tag=LDO49_RS14250;product=monocarboxylate uptake permease MctP;protein_id=WP_060072139.1;transl_table=11 NZ_CAJZAV010000103.1 RefSeq gene 9121 9576 . - . ID=gene-LDO49_RS14255;Name=LDO49_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14255;old_locus_tag=BCEP4_1910011 NZ_CAJZAV010000103.1 Protein Homology CDS 9121 9576 . - 0 ID=cds-WP_059486351.1;Parent=gene-LDO49_RS14255;Dbxref=GenBank:WP_059486351.1;Name=WP_059486351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896417.1;locus_tag=LDO49_RS14255;product=VOC family protein;protein_id=WP_059486351.1;transl_table=11 NZ_CAJZAV010000103.1 RefSeq gene 9818 10771 . - . ID=gene-LDO49_RS14260;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=LDO49_RS14260;old_locus_tag=BCEP4_1910012 NZ_CAJZAV010000103.1 Protein Homology CDS 9818 10771 . - 0 ID=cds-WP_027786801.1;Parent=gene-LDO49_RS14260;Dbxref=GenBank:WP_027786801.1;Name=WP_027786801.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012432264.1;locus_tag=LDO49_RS14260;product=transaldolase;protein_id=WP_027786801.1;transl_table=11 NZ_CAJZAV010000103.1 RefSeq gene 10928 12139 . - . ID=gene-LDO49_RS14265;Name=LDO49_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14265;old_locus_tag=BCEP4_1910013 NZ_CAJZAV010000103.1 Protein Homology CDS 10928 12139 . - 0 ID=cds-WP_060072142.1;Parent=gene-LDO49_RS14265;Dbxref=GenBank:WP_060072142.1;Name=WP_060072142.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186095.1;locus_tag=LDO49_RS14265;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_060072142.1;transl_table=11 NZ_CAJZAV010000103.1 RefSeq gene 12195 13370 . - . ID=gene-LDO49_RS14270;Name=LDO49_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14270;old_locus_tag=BCEP4_1910014 NZ_CAJZAV010000103.1 Protein Homology CDS 12195 13370 . - 0 ID=cds-WP_027786803.1;Parent=gene-LDO49_RS14270;Dbxref=GenBank:WP_027786803.1;Name=WP_027786803.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186167.1;locus_tag=LDO49_RS14270;product=vWA domain-containing protein;protein_id=WP_027786803.1;transl_table=11 NZ_CAJZAV010000103.1 RefSeq gene 13397 14239 . - . ID=gene-LDO49_RS14275;Name=LDO49_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14275;old_locus_tag=BCEP4_1910015 NZ_CAJZAV010000103.1 Protein Homology CDS 13397 14239 . - 0 ID=cds-WP_021158556.1;Parent=gene-LDO49_RS14275;Dbxref=GenBank:WP_021158556.1;Name=WP_021158556.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186676.1;locus_tag=LDO49_RS14275;product=AAA family ATPase;protein_id=WP_021158556.1;transl_table=11 NZ_CAJZAV010000103.1 RefSeq gene 14475 14834 . + . ID=gene-LDO49_RS14280;Name=LDO49_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14280;old_locus_tag=BCEP4_1910016 NZ_CAJZAV010000103.1 Protein Homology CDS 14475 14834 . + 0 ID=cds-WP_021158557.1;Parent=gene-LDO49_RS14280;Dbxref=GenBank:WP_021158557.1;Name=WP_021158557.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601686.1;locus_tag=LDO49_RS14280;product=c-type cytochrome;protein_id=WP_021158557.1;transl_table=11 NZ_CAJZAV010000103.1 RefSeq gene 14874 15233 . + . ID=gene-LDO49_RS14285;Name=LDO49_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14285;old_locus_tag=BCEP4_1910017 NZ_CAJZAV010000103.1 Protein Homology CDS 14874 15233 . + 0 ID=cds-WP_021158558.1;Parent=gene-LDO49_RS14285;Dbxref=GenBank:WP_021158558.1;Name=WP_021158558.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761210.1;locus_tag=LDO49_RS14285;product=c-type cytochrome;protein_id=WP_021158558.1;transl_table=11 NZ_CAJZAV010000103.1 RefSeq gene 15333 15767 . - . ID=gene-LDO49_RS14290;Name=LDO49_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14290;old_locus_tag=BCEP4_1910018 NZ_CAJZAV010000103.1 Protein Homology CDS 15333 15767 . - 0 ID=cds-WP_059497744.1;Parent=gene-LDO49_RS14290;Dbxref=GenBank:WP_059497744.1;Name=WP_059497744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896423.1;locus_tag=LDO49_RS14290;product=DUF1841 family protein;protein_id=WP_059497744.1;transl_table=11 NZ_CAJZAV010000103.1 RefSeq gene 16049 16754 . + . ID=gene-LDO49_RS14295;Name=LDO49_RS14295;end_range=16754,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14295;partial=true NZ_CAJZAV010000103.1 Protein Homology CDS 16049 16754 . + 0 ID=cds-WP_224051922.1;Parent=gene-LDO49_RS14295;Dbxref=GenBank:WP_224051922.1;Name=WP_224051922.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=16754,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545870.1;locus_tag=LDO49_RS14295;partial=true;product=DMT family transporter;protein_id=WP_224051922.1;transl_table=11 ##sequence-region NZ_CAJZAV010000104.1 1 17171 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000104.1 RefSeq region 1 17171 . + . ID=NZ_CAJZAV010000104.1:1..17171;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_192 NZ_CAJZAV010000104.1 RefSeq gene 149 1249 . - . ID=gene-LDO49_RS14300;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=LDO49_RS14300;old_locus_tag=BCEP4_1920001 NZ_CAJZAV010000104.1 Protein Homology CDS 149 1249 . - 0 ID=cds-WP_021160805.1;Parent=gene-LDO49_RS14300;Dbxref=GenBank:WP_021160805.1;Name=WP_021160805.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413771.1;locus_tag=LDO49_RS14300;product=chorismate synthase;protein_id=WP_021160805.1;transl_table=11 NZ_CAJZAV010000104.1 RefSeq gene 1487 3421 . - . ID=gene-LDO49_RS14305;Name=LDO49_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14305;old_locus_tag=BCEP4_1920002 NZ_CAJZAV010000104.1 Protein Homology CDS 1487 3421 . - 0 ID=cds-WP_060074036.1;Parent=gene-LDO49_RS14305;Dbxref=GenBank:WP_060074036.1;Name=WP_060074036.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363715.1;locus_tag=LDO49_RS14305;product=MFS transporter;protein_id=WP_060074036.1;transl_table=11 NZ_CAJZAV010000104.1 RefSeq gene 3561 4016 . - . ID=gene-LDO49_RS14310;Name=LDO49_RS14310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14310;old_locus_tag=BCEP4_1920003 NZ_CAJZAV010000104.1 Protein Homology CDS 3561 4016 . - 0 ID=cds-WP_006755543.1;Parent=gene-LDO49_RS14310;Dbxref=GenBank:WP_006755543.1;Name=WP_006755543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755543.1;locus_tag=LDO49_RS14310;product=CBS domain-containing protein;protein_id=WP_006755543.1;transl_table=11 NZ_CAJZAV010000104.1 RefSeq gene 4176 4493 . + . ID=gene-LDO49_RS14315;Name=LDO49_RS14315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14315;old_locus_tag=BCEP4_1920004 NZ_CAJZAV010000104.1 Protein Homology CDS 4176 4493 . + 0 ID=cds-WP_021160807.1;Parent=gene-LDO49_RS14315;Dbxref=GenBank:WP_021160807.1;Name=WP_021160807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009905783.1;locus_tag=LDO49_RS14315;product=Mpo1-like protein;protein_id=WP_021160807.1;transl_table=11 NZ_CAJZAV010000104.1 RefSeq gene 4510 5841 . - . ID=gene-LDO49_RS14320;Name=LDO49_RS14320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14320;old_locus_tag=BCEP4_1920005 NZ_CAJZAV010000104.1 Protein Homology CDS 4510 5841 . - 0 ID=cds-WP_021160808.1;Parent=gene-LDO49_RS14320;Dbxref=GenBank:WP_021160808.1;Name=WP_021160808.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115728.1;locus_tag=LDO49_RS14320;product=YihY family inner membrane protein;protein_id=WP_021160808.1;transl_table=11 NZ_CAJZAV010000104.1 RefSeq gene 5987 6607 . + . ID=gene-LDO49_RS14325;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=LDO49_RS14325;old_locus_tag=BCEP4_1920006 NZ_CAJZAV010000104.1 Protein Homology CDS 5987 6607 . + 0 ID=cds-WP_021160809.1;Parent=gene-LDO49_RS14325;Dbxref=GenBank:WP_021160809.1;Name=WP_021160809.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476205.1;locus_tag=LDO49_RS14325;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_021160809.1;transl_table=11 NZ_CAJZAV010000104.1 RefSeq gene 6604 6996 . + . ID=gene-LDO49_RS14330;Name=LDO49_RS14330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14330;old_locus_tag=BCEP4_1920007 NZ_CAJZAV010000104.1 Protein Homology CDS 6604 6996 . + 0 ID=cds-WP_021160810.1;Parent=gene-LDO49_RS14330;Dbxref=GenBank:WP_021160810.1;Name=WP_021160810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328357.1;locus_tag=LDO49_RS14330;product=DUF2069 domain-containing protein;protein_id=WP_021160810.1;transl_table=11 NZ_CAJZAV010000104.1 RefSeq gene 7015 8436 . + . ID=gene-LDO49_RS14335;Name=LDO49_RS14335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14335;old_locus_tag=BCEP4_1920008 NZ_CAJZAV010000104.1 Protein Homology CDS 7015 8436 . + 0 ID=cds-WP_027787719.1;Parent=gene-LDO49_RS14335;Dbxref=GenBank:WP_027787719.1;Name=WP_027787719.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545230.1;locus_tag=LDO49_RS14335;product=FAD-binding oxidoreductase;protein_id=WP_027787719.1;transl_table=11 NZ_CAJZAV010000104.1 RefSeq gene 8462 9292 . + . ID=gene-LDO49_RS14340;Name=LDO49_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14340;old_locus_tag=BCEP4_1920009 NZ_CAJZAV010000104.1 Protein Homology CDS 8462 9292 . + 0 ID=cds-WP_059484314.1;Parent=gene-LDO49_RS14340;Dbxref=GenBank:WP_059484314.1;Name=WP_059484314.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363709.1;locus_tag=LDO49_RS14340;product=metallophosphoesterase;protein_id=WP_059484314.1;transl_table=11 NZ_CAJZAV010000104.1 RefSeq gene 9363 9515 . - . ID=gene-LDO49_RS14345;Name=LDO49_RS14345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14345;old_locus_tag=BCEP4_1920010 NZ_CAJZAV010000104.1 Protein Homology CDS 9363 9515 . - 0 ID=cds-WP_006476208.1;Parent=gene-LDO49_RS14345;Dbxref=GenBank:WP_006476208.1;Name=WP_006476208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476208.1;locus_tag=LDO49_RS14345;product=hypothetical protein;protein_id=WP_006476208.1;transl_table=11 NZ_CAJZAV010000104.1 RefSeq gene 9633 10574 . - . ID=gene-LDO49_RS14350;Name=LDO49_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14350;old_locus_tag=BCEP4_1920011 NZ_CAJZAV010000104.1 Protein Homology CDS 9633 10574 . - 0 ID=cds-WP_059484315.1;Parent=gene-LDO49_RS14350;Dbxref=GenBank:WP_059484315.1;Name=WP_059484315.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115732.1;locus_tag=LDO49_RS14350;product=LysR family transcriptional regulator;protein_id=WP_059484315.1;transl_table=11 NZ_CAJZAV010000104.1 RefSeq gene 10732 12330 . + . ID=gene-LDO49_RS14355;Name=LDO49_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14355;old_locus_tag=BCEP4_1920012 NZ_CAJZAV010000104.1 Protein Homology CDS 10732 12330 . + 0 ID=cds-WP_224051923.1;Parent=gene-LDO49_RS14355;Dbxref=GenBank:WP_224051923.1;Name=WP_224051923.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545227.1;locus_tag=LDO49_RS14355;product=efflux transporter outer membrane subunit;protein_id=WP_224051923.1;transl_table=11 NZ_CAJZAV010000104.1 RefSeq gene 12345 14546 . + . ID=gene-LDO49_RS14360;Name=LDO49_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14360;old_locus_tag=BCEP4_1920013 NZ_CAJZAV010000104.1 Protein Homology CDS 12345 14546 . + 0 ID=cds-WP_059674793.1;Parent=gene-LDO49_RS14360;Dbxref=GenBank:WP_059674793.1;Name=WP_059674793.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017843532.1;locus_tag=LDO49_RS14360;product=FUSC family protein;protein_id=WP_059674793.1;transl_table=11 NZ_CAJZAV010000104.1 RefSeq gene 14543 14746 . + . ID=gene-LDO49_RS14365;Name=LDO49_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14365;old_locus_tag=BCEP4_1920014 NZ_CAJZAV010000104.1 Protein Homology CDS 14543 14746 . + 0 ID=cds-WP_011351756.1;Parent=gene-LDO49_RS14365;Dbxref=GenBank:WP_011351756.1;Name=WP_011351756.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891634.1;locus_tag=LDO49_RS14365;product=DUF1656 domain-containing protein;protein_id=WP_011351756.1;transl_table=11 NZ_CAJZAV010000104.1 RefSeq gene 14759 15634 . + . ID=gene-LDO49_RS14370;Name=LDO49_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14370;old_locus_tag=BCEP4_1920015 NZ_CAJZAV010000104.1 Protein Homology CDS 14759 15634 . + 0 ID=cds-WP_014897260.1;Parent=gene-LDO49_RS14370;Dbxref=GenBank:WP_014897260.1;Name=WP_014897260.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897260.1;locus_tag=LDO49_RS14370;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_014897260.1;transl_table=11 NZ_CAJZAV010000104.1 RefSeq gene 15656 17171 . - . ID=gene-LDO49_RS14375;Name=LDO49_RS14375;end_range=17171,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14375;old_locus_tag=BCEP4_1920016;partial=true NZ_CAJZAV010000104.1 Protein Homology CDS 15656 17171 . - 1 ID=cds-WP_290369845.1;Parent=gene-LDO49_RS14375;Dbxref=GenBank:WP_290369845.1;Name=WP_290369845.1;Ontology_term=GO:0007165,GO:0016020;end_range=17171,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351753.1;locus_tag=LDO49_RS14375;partial=true;product=methyl-accepting chemotaxis protein;protein_id=WP_290369845.1;transl_table=11 ##sequence-region NZ_CAJZAV010000105.1 1 14832 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000105.1 RefSeq region 1 14832 . + . ID=NZ_CAJZAV010000105.1:1..14832;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_193 NZ_CAJZAV010000105.1 RefSeq gene 1 697 . - . ID=gene-LDO49_RS14380;Name=LDO49_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14380;partial=true;start_range=.,1 NZ_CAJZAV010000105.1 Protein Homology CDS 1 697 . - 0 ID=cds-WP_224051926.1;Parent=gene-LDO49_RS14380;Dbxref=GenBank:WP_224051926.1;Name=WP_224051926.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365420.1;locus_tag=LDO49_RS14380;partial=true;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_224051926.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000105.1 RefSeq gene 694 1041 . - . ID=gene-LDO49_RS14385;Name=LDO49_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14385;old_locus_tag=BCEP4_1930002 NZ_CAJZAV010000105.1 Protein Homology CDS 694 1041 . - 0 ID=cds-WP_059709821.1;Parent=gene-LDO49_RS14385;Dbxref=GenBank:WP_059709821.1;Name=WP_059709821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495622.1;locus_tag=LDO49_RS14385;product=(2Fe-2S)-binding protein;protein_id=WP_059709821.1;transl_table=11 NZ_CAJZAV010000105.1 RefSeq gene 1041 1835 . - . ID=gene-LDO49_RS14390;Name=LDO49_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14390;old_locus_tag=BCEP4_1930003 NZ_CAJZAV010000105.1 Protein Homology CDS 1041 1835 . - 0 ID=cds-WP_021158739.1;Parent=gene-LDO49_RS14390;Dbxref=GenBank:WP_021158739.1;Name=WP_021158739.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020068159.1;locus_tag=LDO49_RS14390;product=ABC transporter permease;protein_id=WP_021158739.1;transl_table=11 NZ_CAJZAV010000105.1 RefSeq gene 1832 2812 . - . ID=gene-LDO49_RS14395;Name=LDO49_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14395;old_locus_tag=BCEP4_1930004 NZ_CAJZAV010000105.1 Protein Homology CDS 1832 2812 . - 0 ID=cds-WP_060217881.1;Parent=gene-LDO49_RS14395;Dbxref=GenBank:WP_060217881.1;Name=WP_060217881.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365423.1;locus_tag=LDO49_RS14395;product=ABC transporter permease;protein_id=WP_060217881.1;transl_table=11 NZ_CAJZAV010000105.1 RefSeq gene 2813 3895 . - . ID=gene-LDO49_RS14400;Name=LDO49_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14400;old_locus_tag=BCEP4_1930006 NZ_CAJZAV010000105.1 Protein Homology CDS 2813 3895 . - 0 ID=cds-WP_224051927.1;Parent=gene-LDO49_RS14400;Dbxref=GenBank:WP_224051927.1;Name=WP_224051927.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759615.1;locus_tag=LDO49_RS14400;product=ABC transporter ATP-binding protein;protein_id=WP_224051927.1;transl_table=11 NZ_CAJZAV010000105.1 RefSeq gene 4190 5086 . + . ID=gene-LDO49_RS14405;Name=LDO49_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14405;old_locus_tag=BCEP4_1930005 NZ_CAJZAV010000105.1 Protein Homology CDS 4190 5086 . + 0 ID=cds-WP_021158743.1;Parent=gene-LDO49_RS14405;Dbxref=GenBank:WP_021158743.1;Name=WP_021158743.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660296.1;locus_tag=LDO49_RS14405;product=IclR family transcriptional regulator;protein_id=WP_021158743.1;transl_table=11 NZ_CAJZAV010000105.1 RefSeq gene 5390 6526 . + . ID=gene-LDO49_RS14410;Name=LDO49_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14410;old_locus_tag=BCEP4_1930007 NZ_CAJZAV010000105.1 Protein Homology CDS 5390 6526 . + 0 ID=cds-WP_060071179.1;Parent=gene-LDO49_RS14410;Dbxref=GenBank:WP_060071179.1;Name=WP_060071179.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900270.1;locus_tag=LDO49_RS14410;product=porin;protein_id=WP_060071179.1;transl_table=11 NZ_CAJZAV010000105.1 RefSeq gene 6566 6778 . + . ID=gene-LDO49_RS14415;Name=LDO49_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14415;old_locus_tag=BCEP4_1930008 NZ_CAJZAV010000105.1 Protein Homology CDS 6566 6778 . + 0 ID=cds-WP_059494669.1;Parent=gene-LDO49_RS14415;Dbxref=GenBank:WP_059494669.1;Name=WP_059494669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356070.1;locus_tag=LDO49_RS14415;product=DUF3311 domain-containing protein;protein_id=WP_059494669.1;transl_table=11 NZ_CAJZAV010000105.1 RefSeq gene 6775 8253 . + . ID=gene-LDO49_RS14420;Name=LDO49_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14420;old_locus_tag=BCEP4_1930009 NZ_CAJZAV010000105.1 Protein Homology CDS 6775 8253 . + 0 ID=cds-WP_060071104.1;Parent=gene-LDO49_RS14420;Dbxref=GenBank:WP_060071104.1;Name=WP_060071104.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356069.1;locus_tag=LDO49_RS14420;product=sodium:solute symporter family protein;protein_id=WP_060071104.1;transl_table=11 NZ_CAJZAV010000105.1 RefSeq gene 8395 9852 . + . ID=gene-LDO49_RS14425;Name=LDO49_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14425;old_locus_tag=BCEP4_1930010 NZ_CAJZAV010000105.1 Protein Homology CDS 8395 9852 . + 0 ID=cds-WP_224051928.1;Parent=gene-LDO49_RS14425;Dbxref=GenBank:WP_224051928.1;Name=WP_224051928.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356068.1;locus_tag=LDO49_RS14425;product=amidohydrolase family protein;protein_id=WP_224051928.1;transl_table=11 NZ_CAJZAV010000105.1 RefSeq gene 10011 11066 . - . ID=gene-LDO49_RS14430;Name=LDO49_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14430;old_locus_tag=BCEP4_1930012 NZ_CAJZAV010000105.1 Protein Homology CDS 10011 11066 . - 0 ID=cds-WP_060147438.1;Parent=gene-LDO49_RS14430;Dbxref=GenBank:WP_060147438.1;Name=WP_060147438.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018389.6;locus_tag=LDO49_RS14430;product=DUF1176 domain-containing protein;protein_id=WP_060147438.1;transl_table=11 NZ_CAJZAV010000105.1 RefSeq gene 11325 11987 . + . ID=gene-LDO49_RS14435;Name=LDO49_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14435;old_locus_tag=BCEP4_1930013 NZ_CAJZAV010000105.1 GeneMarkS-2+ CDS 11325 11987 . + 0 ID=cds-WP_060054564.1;Parent=gene-LDO49_RS14435;Dbxref=GenBank:WP_060054564.1;Name=WP_060054564.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS14435;product=hypothetical protein;protein_id=WP_060054564.1;transl_table=11 NZ_CAJZAV010000105.1 RefSeq gene 12024 12611 . - . ID=gene-LDO49_RS14440;Name=LDO49_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14440;old_locus_tag=BCEP4_1930014 NZ_CAJZAV010000105.1 Protein Homology CDS 12024 12611 . - 0 ID=cds-WP_224051929.1;Parent=gene-LDO49_RS14440;Dbxref=GenBank:WP_224051929.1;Name=WP_224051929.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338625.1;locus_tag=LDO49_RS14440;product=GNAT family N-acetyltransferase;protein_id=WP_224051929.1;transl_table=11 NZ_CAJZAV010000105.1 RefSeq gene 12726 13109 . + . ID=gene-LDO49_RS14445;Name=LDO49_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14445;old_locus_tag=BCEP4_1930015 NZ_CAJZAV010000105.1 Protein Homology CDS 12726 13109 . + 0 ID=cds-WP_048020274.1;Parent=gene-LDO49_RS14445;Dbxref=GenBank:WP_048020274.1;Name=WP_048020274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548356.1;locus_tag=LDO49_RS14445;product=hypothetical protein;protein_id=WP_048020274.1;transl_table=11 NZ_CAJZAV010000105.1 RefSeq gene 13188 13958 . - . ID=gene-LDO49_RS14450;Name=LDO49_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14450;old_locus_tag=BCEP4_1930016 NZ_CAJZAV010000105.1 Protein Homology CDS 13188 13958 . - 0 ID=cds-WP_059861142.1;Parent=gene-LDO49_RS14450;Dbxref=GenBank:WP_059861142.1;Name=WP_059861142.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356062.1;locus_tag=LDO49_RS14450;product=ABC transporter substrate-binding protein;protein_id=WP_059861142.1;transl_table=11 NZ_CAJZAV010000105.1 RefSeq pseudogene 14103 14682 . - . ID=gene-LDO49_RS14455;Name=LDO49_RS14455;end_range=14682,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS14455;old_locus_tag=BCEP4_1930017;partial=true;pseudo=true NZ_CAJZAV010000105.1 Protein Homology CDS 14103 14682 . - 1 ID=cds-LDO49_RS14455;Parent=gene-LDO49_RS14455;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=14682,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365428.1;locus_tag=LDO49_RS14455;partial=true;product=cyanate transporter;pseudo=true;transl_table=11 NZ_CAJZAV010000105.1 RefSeq pseudogene 14693 14832 . - . ID=gene-LDO49_RS38050;Name=LDO49_RS38050;end_range=14832,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38050;old_locus_tag=BCEP4_1930018;partial=true;pseudo=true;start_range=.,14693 NZ_CAJZAV010000105.1 Protein Homology CDS 14693 14832 . - 1 ID=cds-LDO49_RS38050;Parent=gene-LDO49_RS38050;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=14832,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365428.1;locus_tag=LDO49_RS38050;partial=true;product=cyanate transporter;pseudo=true;start_range=.,14693;transl_table=11 ##sequence-region NZ_CAJZAV010000106.1 1 5504 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000106.1 RefSeq region 1 5504 . + . ID=NZ_CAJZAV010000106.1:1..5504;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_194 NZ_CAJZAV010000106.1 RefSeq gene 1 648 . + . ID=gene-LDO49_RS14460;Name=LDO49_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14460;old_locus_tag=BCEP4_1940001;partial=true;start_range=.,1 NZ_CAJZAV010000106.1 Protein Homology CDS 1 648 . + 0 ID=cds-WP_224051930.1;Parent=gene-LDO49_RS14460;Dbxref=GenBank:WP_224051930.1;Name=WP_224051930.1;Ontology_term=GO:0006281,GO:0003677,GO:0003913,GO:0050660;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA photolyase activity|0003913||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549418.1;locus_tag=LDO49_RS14460;partial=true;product=cryptochrome/photolyase family protein;protein_id=WP_224051930.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000106.1 RefSeq gene 784 2016 . - . ID=gene-LDO49_RS14465;Name=LDO49_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14465;old_locus_tag=BCEP4_1940003 NZ_CAJZAV010000106.1 Protein Homology CDS 784 2016 . - 0 ID=cds-WP_060070595.1;Parent=gene-LDO49_RS14465;Dbxref=GenBank:WP_060070595.1;Name=WP_060070595.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896574.1;locus_tag=LDO49_RS14465;product=MFS transporter;protein_id=WP_060070595.1;transl_table=11 NZ_CAJZAV010000106.1 RefSeq gene 2215 3156 . - . ID=gene-LDO49_RS14470;Name=LDO49_RS14470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14470;old_locus_tag=BCEP4_1940004 NZ_CAJZAV010000106.1 Protein Homology CDS 2215 3156 . - 0 ID=cds-WP_060070592.1;Parent=gene-LDO49_RS14470;Dbxref=GenBank:WP_060070592.1;Name=WP_060070592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328853.1;locus_tag=LDO49_RS14470;product=LysR substrate-binding domain-containing protein;protein_id=WP_060070592.1;transl_table=11 NZ_CAJZAV010000106.1 RefSeq gene 3491 4531 . + . ID=gene-LDO49_RS14475;Name=LDO49_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14475;old_locus_tag=BCEP4_1940005 NZ_CAJZAV010000106.1 Protein Homology CDS 3491 4531 . + 0 ID=cds-WP_124844423.1;Parent=gene-LDO49_RS14475;Dbxref=GenBank:WP_124844423.1;Name=WP_124844423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497791.1;locus_tag=LDO49_RS14475;product=alpha/beta hydrolase family protein;protein_id=WP_124844423.1;transl_table=11 NZ_CAJZAV010000106.1 RefSeq pseudogene 4715 4962 . + . ID=gene-LDO49_RS38055;Name=LDO49_RS38055;end_range=4962,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38055;partial=true;pseudo=true NZ_CAJZAV010000106.1 Protein Homology CDS 4715 4962 . + 0 ID=cds-LDO49_RS38055;Parent=gene-LDO49_RS38055;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=4962,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328851.1;locus_tag=LDO49_RS38055;partial=true;product=4'-phosphopantetheinyl transferase;pseudo=true;transl_table=11 NZ_CAJZAV010000106.1 RefSeq gene 4973 5504 . + . ID=gene-LDO49_RS14480;Name=LDO49_RS14480;end_range=5504,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14480;partial=true;start_range=.,4973 NZ_CAJZAV010000106.1 Protein Homology CDS 4973 5504 . + 0 ID=cds-WP_372585845.1;Parent=gene-LDO49_RS14480;Dbxref=GenBank:WP_372585845.1;Name=WP_372585845.1;Ontology_term=GO:0008897;end_range=5504,.;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328851.1;locus_tag=LDO49_RS14480;partial=true;product=4'-phosphopantetheinyl transferase family protein;protein_id=WP_372585845.1;start_range=.,4973;transl_table=11 ##sequence-region NZ_CAJZAV010000107.1 1 13986 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000107.1 RefSeq region 1 13986 . + . ID=NZ_CAJZAV010000107.1:1..13986;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_195 NZ_CAJZAV010000107.1 RefSeq gene 1 1497 . - . ID=gene-LDO49_RS14485;Name=LDO49_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14485;partial=true;start_range=.,1 NZ_CAJZAV010000107.1 Protein Homology CDS 1 1497 . - 0 ID=cds-WP_224051931.1;Parent=gene-LDO49_RS14485;Dbxref=GenBank:WP_224051931.1;Name=WP_224051931.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366627.1;locus_tag=LDO49_RS14485;partial=true;product=MFS transporter;protein_id=WP_224051931.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000107.1 RefSeq gene 1675 2580 . + . ID=gene-LDO49_RS14490;Name=LDO49_RS14490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14490;old_locus_tag=BCEP4_1950002 NZ_CAJZAV010000107.1 Protein Homology CDS 1675 2580 . + 0 ID=cds-WP_059485170.1;Parent=gene-LDO49_RS14490;Dbxref=GenBank:WP_059485170.1;Name=WP_059485170.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339624.1;locus_tag=LDO49_RS14490;product=LysR family transcriptional regulator;protein_id=WP_059485170.1;transl_table=11 NZ_CAJZAV010000107.1 RefSeq gene 2640 3683 . - . ID=gene-LDO49_RS14495;Name=LDO49_RS14495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14495;old_locus_tag=BCEP4_1950003 NZ_CAJZAV010000107.1 Protein Homology CDS 2640 3683 . - 0 ID=cds-WP_059675956.1;Parent=gene-LDO49_RS14495;Dbxref=GenBank:WP_059675956.1;Name=WP_059675956.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354328.1;locus_tag=LDO49_RS14495;product=AbrB family transcriptional regulator;protein_id=WP_059675956.1;transl_table=11 NZ_CAJZAV010000107.1 RefSeq gene 3680 4207 . - . ID=gene-LDO49_RS14500;Name=LDO49_RS14500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14500;old_locus_tag=BCEP4_1950004 NZ_CAJZAV010000107.1 GeneMarkS-2+ CDS 3680 4207 . - 0 ID=cds-WP_060070540.1;Parent=gene-LDO49_RS14500;Dbxref=GenBank:WP_060070540.1;Name=WP_060070540.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS14500;product=hypothetical protein;protein_id=WP_060070540.1;transl_table=11 NZ_CAJZAV010000107.1 RefSeq gene 4959 6098 . - . ID=gene-LDO49_RS14505;Name=LDO49_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14505;old_locus_tag=BCEP4_1950008 NZ_CAJZAV010000107.1 Protein Homology CDS 4959 6098 . - 0 ID=cds-WP_060070543.1;Parent=gene-LDO49_RS14505;Dbxref=GenBank:WP_060070543.1;Name=WP_060070543.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766300.1;locus_tag=LDO49_RS14505;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_060070543.1;transl_table=11 NZ_CAJZAV010000107.1 RefSeq gene 6095 6886 . - . ID=gene-LDO49_RS14510;Name=LDO49_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14510;old_locus_tag=BCEP4_1950009 NZ_CAJZAV010000107.1 Protein Homology CDS 6095 6886 . - 0 ID=cds-WP_059485175.1;Parent=gene-LDO49_RS14510;Dbxref=GenBank:WP_059485175.1;Name=WP_059485175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354326.1;locus_tag=LDO49_RS14510;product=enoyl-CoA hydratase;protein_id=WP_059485175.1;transl_table=11 NZ_CAJZAV010000107.1 RefSeq gene 6883 7785 . - . ID=gene-LDO49_RS14515;Name=mmsB;gbkey=Gene;gene=mmsB;gene_biotype=protein_coding;locus_tag=LDO49_RS14515;old_locus_tag=BCEP4_1950010 NZ_CAJZAV010000107.1 Protein Homology CDS 6883 7785 . - 0 ID=cds-WP_027789614.1;Parent=gene-LDO49_RS14515;Dbxref=GenBank:WP_027789614.1;Name=WP_027789614.1;Ontology_term=GO:0006574,GO:0008442,GO:0051287;gbkey=CDS;gene=mmsB;go_function=3-hydroxyisobutyrate dehydrogenase activity|0008442||IEA,NAD binding|0051287||IEA;go_process=L-valine catabolic process|0006574||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898638.1;locus_tag=LDO49_RS14515;product=3-hydroxyisobutyrate dehydrogenase;protein_id=WP_027789614.1;transl_table=11 NZ_CAJZAV010000107.1 RefSeq gene 7804 9333 . - . ID=gene-LDO49_RS14520;Name=LDO49_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14520;old_locus_tag=BCEP4_1950011 NZ_CAJZAV010000107.1 Protein Homology CDS 7804 9333 . - 0 ID=cds-WP_059649446.1;Parent=gene-LDO49_RS14520;Dbxref=GenBank:WP_059649446.1;Name=WP_059649446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523210.1;locus_tag=LDO49_RS14520;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_059649446.1;transl_table=11 NZ_CAJZAV010000107.1 RefSeq gene 9442 11148 . - . ID=gene-LDO49_RS14525;Name=LDO49_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14525;old_locus_tag=BCEP4_1950012 NZ_CAJZAV010000107.1 Protein Homology CDS 9442 11148 . - 0 ID=cds-WP_059588759.1;Parent=gene-LDO49_RS14525;Dbxref=GenBank:WP_059588759.1;Name=WP_059588759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530826.1;locus_tag=LDO49_RS14525;product=AMP-binding protein;protein_id=WP_059588759.1;transl_table=11 NZ_CAJZAV010000107.1 RefSeq gene 11333 12466 . - . ID=gene-LDO49_RS14530;Name=LDO49_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14530;old_locus_tag=BCEP4_1950013 NZ_CAJZAV010000107.1 Protein Homology CDS 11333 12466 . - 0 ID=cds-WP_027789617.1;Parent=gene-LDO49_RS14530;Dbxref=GenBank:WP_027789617.1;Name=WP_027789617.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603915.1;locus_tag=LDO49_RS14530;product=acyl-CoA dehydrogenase family protein;protein_id=WP_027789617.1;transl_table=11 NZ_CAJZAV010000107.1 RefSeq gene 12604 13617 . + . ID=gene-LDO49_RS14535;Name=LDO49_RS14535;end_range=13617,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14535;old_locus_tag=BCEP4_1950014;partial=true NZ_CAJZAV010000107.1 Protein Homology CDS 12604 13617 . + 0 ID=cds-WP_224051933.1;Parent=gene-LDO49_RS14535;Dbxref=GenBank:WP_224051933.1;Name=WP_224051933.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=13617,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898634.1;locus_tag=LDO49_RS14535;partial=true;product=AraC family transcriptional regulator;protein_id=WP_224051933.1;transl_table=11 NZ_CAJZAV010000107.1 RefSeq gene 13628 13764 . + . ID=gene-LDO49_RS38060;Name=LDO49_RS38060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38060;partial=true;start_range=.,13628 NZ_CAJZAV010000107.1 Protein Homology CDS 13628 13764 . + 2 ID=cds-WP_443797956.1;Parent=gene-LDO49_RS38060;Dbxref=GenBank:WP_443797956.1;Name=WP_443797956.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: protein motif:HMM:NF024242.6;locus_tag=LDO49_RS38060;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_443797956.1;start_range=.,13628;transl_table=11 ##sequence-region NZ_CAJZAV010000108.1 1 18456 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000108.1 RefSeq region 1 18456 . + . ID=NZ_CAJZAV010000108.1:1..18456;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_196 NZ_CAJZAV010000108.1 RefSeq gene 343 1239 . + . ID=gene-LDO49_RS14540;Name=LDO49_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14540;old_locus_tag=BCEP4_1960001 NZ_CAJZAV010000108.1 Protein Homology CDS 343 1239 . + 0 ID=cds-WP_021163402.1;Parent=gene-LDO49_RS14540;Dbxref=GenBank:WP_021163402.1;Name=WP_021163402.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549404.1;locus_tag=LDO49_RS14540;product=DMT family transporter;protein_id=WP_021163402.1;transl_table=11 NZ_CAJZAV010000108.1 RefSeq gene 1353 1976 . + . ID=gene-LDO49_RS14545;Name=LDO49_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14545;old_locus_tag=BCEP4_1960002 NZ_CAJZAV010000108.1 Protein Homology CDS 1353 1976 . + 0 ID=cds-WP_042977899.1;Parent=gene-LDO49_RS14545;Dbxref=GenBank:WP_042977899.1;Name=WP_042977899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896552.1;locus_tag=LDO49_RS14545;product=TIGR00645 family protein;protein_id=WP_042977899.1;transl_table=11 NZ_CAJZAV010000108.1 RefSeq gene 2011 3534 . + . ID=gene-LDO49_RS14550;Name=LDO49_RS14550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14550;old_locus_tag=BCEP4_1960003 NZ_CAJZAV010000108.1 Protein Homology CDS 2011 3534 . + 0 ID=cds-WP_006478316.1;Parent=gene-LDO49_RS14550;Dbxref=GenBank:WP_006478316.1;Name=WP_006478316.1;Ontology_term=GO:0006091,GO:0006099,GO:0004333,GO:0046872,GO:0051539;gbkey=CDS;go_function=fumarate hydratase activity|0004333||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=generation of precursor metabolites and energy|0006091||IEA,tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549402.1;locus_tag=LDO49_RS14550;product=fumarate hydratase;protein_id=WP_006478316.1;transl_table=11 NZ_CAJZAV010000108.1 RefSeq gene 3729 4205 . + . ID=gene-LDO49_RS14555;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=LDO49_RS14555;old_locus_tag=BCEP4_1960004 NZ_CAJZAV010000108.1 Protein Homology CDS 3729 4205 . + 0 ID=cds-WP_011352652.1;Parent=gene-LDO49_RS14555;Dbxref=GenBank:WP_011352652.1;Name=WP_011352652.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028498.1;locus_tag=LDO49_RS14555;product=bacterioferritin;protein_id=WP_011352652.1;transl_table=11 NZ_CAJZAV010000108.1 RefSeq gene 4245 5105 . + . ID=gene-LDO49_RS14560;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=LDO49_RS14560;old_locus_tag=BCEP4_1960005 NZ_CAJZAV010000108.1 Protein Homology CDS 4245 5105 . + 0 ID=cds-WP_060073205.1;Parent=gene-LDO49_RS14560;Dbxref=GenBank:WP_060073205.1;Name=WP_060073205.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496786.1;locus_tag=LDO49_RS14560;product=glutamate racemase;protein_id=WP_060073205.1;transl_table=11 NZ_CAJZAV010000108.1 RefSeq gene 5257 5493 . + . ID=gene-LDO49_RS14565;Name=LDO49_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14565 NZ_CAJZAV010000108.1 Protein Homology CDS 5257 5493 . + 0 ID=cds-WP_011352654.1;Parent=gene-LDO49_RS14565;Dbxref=GenBank:WP_011352654.1;Name=WP_011352654.1;Ontology_term=GO:0046872,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187745.1;locus_tag=LDO49_RS14565;product=(2Fe-2S)-binding protein;protein_id=WP_011352654.1;transl_table=11 NZ_CAJZAV010000108.1 RefSeq gene 5711 6442 . + . ID=gene-LDO49_RS14570;Name=LDO49_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14570;old_locus_tag=BCEP4_1960007 NZ_CAJZAV010000108.1 Protein Homology CDS 5711 6442 . + 0 ID=cds-WP_048026661.1;Parent=gene-LDO49_RS14570;Dbxref=GenBank:WP_048026661.1;Name=WP_048026661.1;Ontology_term=GO:0015031,GO:0015891,GO:0055085,GO:0031992,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=energy transducer activity|0031992||IEA;go_process=protein transport|0015031||IEA,siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492728.1;locus_tag=LDO49_RS14570;product=energy transducer TonB;protein_id=WP_048026661.1;transl_table=11 NZ_CAJZAV010000108.1 RefSeq gene 6479 7210 . + . ID=gene-LDO49_RS14575;Name=LDO49_RS14575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14575;old_locus_tag=BCEP4_1960008 NZ_CAJZAV010000108.1 Protein Homology CDS 6479 7210 . + 0 ID=cds-WP_021163406.1;Parent=gene-LDO49_RS14575;Dbxref=GenBank:WP_021163406.1;Name=WP_021163406.1;Ontology_term=GO:0015031,GO:0015252,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=proton channel activity|0015252||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331685.1;locus_tag=LDO49_RS14575;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_021163406.1;transl_table=11 NZ_CAJZAV010000108.1 RefSeq gene 7224 7652 . + . ID=gene-LDO49_RS14580;Name=LDO49_RS14580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14580;old_locus_tag=BCEP4_1960009 NZ_CAJZAV010000108.1 Protein Homology CDS 7224 7652 . + 0 ID=cds-WP_021163407.1;Parent=gene-LDO49_RS14580;Dbxref=GenBank:WP_021163407.1;Name=WP_021163407.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011401478.1;locus_tag=LDO49_RS14580;product=ExbD/TolR family protein;protein_id=WP_021163407.1;transl_table=11 NZ_CAJZAV010000108.1 RefSeq gene 8037 9011 . - . ID=gene-LDO49_RS14585;Name=LDO49_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14585;old_locus_tag=BCEP4_1960010 NZ_CAJZAV010000108.1 Protein Homology CDS 8037 9011 . - 0 ID=cds-WP_021163408.1;Parent=gene-LDO49_RS14585;Dbxref=GenBank:WP_021163408.1;Name=WP_021163408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328881.1;locus_tag=LDO49_RS14585;product=LysR family transcriptional regulator;protein_id=WP_021163408.1;transl_table=11 NZ_CAJZAV010000108.1 RefSeq gene 9134 10006 . + . ID=gene-LDO49_RS14590;Name=LDO49_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14590;old_locus_tag=BCEP4_1960011 NZ_CAJZAV010000108.1 Protein Homology CDS 9134 10006 . + 0 ID=cds-WP_060073202.1;Parent=gene-LDO49_RS14590;Dbxref=GenBank:WP_060073202.1;Name=WP_060073202.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525407.1;locus_tag=LDO49_RS14590;product=pirin family protein;protein_id=WP_060073202.1;transl_table=11 NZ_CAJZAV010000108.1 RefSeq gene 10106 10588 . + . ID=gene-LDO49_RS14595;Name=LDO49_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14595;old_locus_tag=BCEP4_1960012 NZ_CAJZAV010000108.1 Protein Homology CDS 10106 10588 . + 0 ID=cds-WP_027786893.1;Parent=gene-LDO49_RS14595;Dbxref=GenBank:WP_027786893.1;Name=WP_027786893.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852697.1;locus_tag=LDO49_RS14595;product=SRPBCC family protein;protein_id=WP_027786893.1;transl_table=11 NZ_CAJZAV010000108.1 RefSeq gene 10727 10972 . + . ID=gene-LDO49_RS14600;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=LDO49_RS14600;old_locus_tag=BCEP4_1960013 NZ_CAJZAV010000108.1 Protein Homology CDS 10727 10972 . + 0 ID=cds-WP_021163412.1;Parent=gene-LDO49_RS14600;Dbxref=GenBank:WP_021163412.1;Name=WP_021163412.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478306.1;locus_tag=LDO49_RS14600;product=hemin uptake protein HemP;protein_id=WP_021163412.1;transl_table=11 NZ_CAJZAV010000108.1 RefSeq gene 11245 12642 . - . ID=gene-LDO49_RS14605;Name=LDO49_RS14605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14605;old_locus_tag=BCEP4_1960015 NZ_CAJZAV010000108.1 Protein Homology CDS 11245 12642 . - 0 ID=cds-WP_060073200.1;Parent=gene-LDO49_RS14605;Dbxref=GenBank:WP_060073200.1;Name=WP_060073200.1;Ontology_term=GO:0051539;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352662.1;locus_tag=LDO49_RS14605;product=4Fe-4S binding protein;protein_id=WP_060073200.1;transl_table=11 NZ_CAJZAV010000108.1 RefSeq gene 12639 13481 . - . ID=gene-LDO49_RS14610;Name=LDO49_RS14610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14610;old_locus_tag=BCEP4_1960016 NZ_CAJZAV010000108.1 Protein Homology CDS 12639 13481 . - 0 ID=cds-WP_021163415.1;Parent=gene-LDO49_RS14610;Dbxref=GenBank:WP_021163415.1;Name=WP_021163415.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009914340.1;locus_tag=LDO49_RS14610;product=FTR1 family iron permease;protein_id=WP_021163415.1;transl_table=11 NZ_CAJZAV010000108.1 RefSeq gene 13540 13872 . - . ID=gene-LDO49_RS14615;Name=LDO49_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14615;old_locus_tag=BCEP4_1960017 NZ_CAJZAV010000108.1 Protein Homology CDS 13540 13872 . - 0 ID=cds-WP_021163416.1;Parent=gene-LDO49_RS14615;Dbxref=GenBank:WP_021163416.1;Name=WP_021163416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763873.1;locus_tag=LDO49_RS14615;product=cupredoxin domain-containing protein;protein_id=WP_021163416.1;transl_table=11 NZ_CAJZAV010000108.1 RefSeq gene 13928 14479 . - . ID=gene-LDO49_RS14620;Name=LDO49_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14620;old_locus_tag=BCEP4_1960018 NZ_CAJZAV010000108.1 Protein Homology CDS 13928 14479 . - 0 ID=cds-WP_021163417.1;Parent=gene-LDO49_RS14620;Dbxref=GenBank:WP_021163417.1;Name=WP_021163417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407929.1;locus_tag=LDO49_RS14620;product=iron transporter;protein_id=WP_021163417.1;transl_table=11 NZ_CAJZAV010000108.1 RefSeq gene 14700 16790 . - . ID=gene-LDO49_RS14625;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=LDO49_RS14625;old_locus_tag=BCEP4_1960019 NZ_CAJZAV010000108.1 Protein Homology CDS 14700 16790 . - 0 ID=cds-WP_060073198.1;Parent=gene-LDO49_RS14625;Dbxref=GenBank:WP_060073198.1;Name=WP_060073198.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364293.1;locus_tag=LDO49_RS14625;product=excinuclease ABC subunit UvrB;protein_id=WP_060073198.1;transl_table=11 NZ_CAJZAV010000108.1 RefSeq gene 17054 18253 . + . ID=gene-LDO49_RS14630;Name=LDO49_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14630;old_locus_tag=BCEP4_1960020 NZ_CAJZAV010000108.1 Protein Homology CDS 17054 18253 . + 0 ID=cds-WP_021163420.1;Parent=gene-LDO49_RS14630;Dbxref=GenBank:WP_021163420.1;Name=WP_021163420.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009932860.1;locus_tag=LDO49_RS14630;product=amino acid aminotransferase;protein_id=WP_021163420.1;transl_table=11 ##sequence-region NZ_CAJZAV010000109.1 1 14775 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000109.1 RefSeq region 1 14775 . + . ID=NZ_CAJZAV010000109.1:1..14775;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_197 NZ_CAJZAV010000109.1 RefSeq pseudogene 1 206 . + . ID=gene-LDO49_RS14635;Name=LDO49_RS14635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS14635;old_locus_tag=BCEP4_1970001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000109.1 Protein Homology CDS 1 206 . + 2 ID=cds-LDO49_RS14635;Parent=gene-LDO49_RS14635;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006499070.1;locus_tag=LDO49_RS14635;partial=true;product=VanZ family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000109.1 RefSeq gene 524 841 . + . ID=gene-LDO49_RS14640;Name=LDO49_RS14640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14640;old_locus_tag=BCEP4_1970002 NZ_CAJZAV010000109.1 Protein Homology CDS 524 841 . + 0 ID=cds-WP_011694422.1;Parent=gene-LDO49_RS14640;Dbxref=GenBank:WP_011694422.1;Name=WP_011694422.1;Ontology_term=GO:0009055,GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090546.1;locus_tag=LDO49_RS14640;product=(2Fe-2S) ferredoxin domain-containing protein;protein_id=WP_011694422.1;transl_table=11 NZ_CAJZAV010000109.1 RefSeq gene 855 1499 . + . ID=gene-LDO49_RS14645;Name=LDO49_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14645;old_locus_tag=BCEP4_1970003 NZ_CAJZAV010000109.1 Protein Homology CDS 855 1499 . + 0 ID=cds-WP_021157030.1;Parent=gene-LDO49_RS14645;Dbxref=GenBank:WP_021157030.1;Name=WP_021157030.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908400.1;locus_tag=LDO49_RS14645;product=alpha/beta hydrolase;protein_id=WP_021157030.1;transl_table=11 NZ_CAJZAV010000109.1 RefSeq gene 1988 3265 . + . ID=gene-LDO49_RS14650;Name=LDO49_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14650;old_locus_tag=BCEP4_1970004 NZ_CAJZAV010000109.1 Protein Homology CDS 1988 3265 . + 0 ID=cds-WP_224051934.1;Parent=gene-LDO49_RS14650;Dbxref=GenBank:WP_224051934.1;Name=WP_224051934.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534083.1;locus_tag=LDO49_RS14650;product=D-alanyl-D-alanine carboxypeptidase family protein;protein_id=WP_224051934.1;transl_table=11 NZ_CAJZAV010000109.1 RefSeq gene 3314 4240 . + . ID=gene-LDO49_RS14655;Name=LDO49_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14655;old_locus_tag=BCEP4_1970005 NZ_CAJZAV010000109.1 Protein Homology CDS 3314 4240 . + 0 ID=cds-WP_027789029.1;Parent=gene-LDO49_RS14655;Dbxref=GenBank:WP_027789029.1;Name=WP_027789029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886142.1;locus_tag=LDO49_RS14655;product=D-amino acid aminotransferase;protein_id=WP_027789029.1;transl_table=11 NZ_CAJZAV010000109.1 RefSeq gene 4240 4548 . + . ID=gene-LDO49_RS14660;Name=LDO49_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14660;old_locus_tag=BCEP4_1970006 NZ_CAJZAV010000109.1 Protein Homology CDS 4240 4548 . + 0 ID=cds-WP_011353335.1;Parent=gene-LDO49_RS14660;Dbxref=GenBank:WP_011353335.1;Name=WP_011353335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601869.1;locus_tag=LDO49_RS14660;product=HP0495 family protein;protein_id=WP_011353335.1;transl_table=11 NZ_CAJZAV010000109.1 RefSeq gene 4532 5518 . - . ID=gene-LDO49_RS14665;Name=LDO49_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14665;old_locus_tag=BCEP4_1970007 NZ_CAJZAV010000109.1 Protein Homology CDS 4532 5518 . - 0 ID=cds-WP_021157034.1;Parent=gene-LDO49_RS14665;Dbxref=GenBank:WP_021157034.1;Name=WP_021157034.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353334.1;locus_tag=LDO49_RS14665;product=transcriptional regulator GcvA;protein_id=WP_021157034.1;transl_table=11 NZ_CAJZAV010000109.1 RefSeq gene 5621 5947 . + . ID=gene-LDO49_RS14670;Name=LDO49_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14670;old_locus_tag=BCEP4_1970008 NZ_CAJZAV010000109.1 Protein Homology CDS 5621 5947 . + 0 ID=cds-WP_059486942.1;Parent=gene-LDO49_RS14670;Dbxref=GenBank:WP_059486942.1;Name=WP_059486942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546304.1;locus_tag=LDO49_RS14670;product=DUF2917 domain-containing protein;protein_id=WP_059486942.1;transl_table=11 NZ_CAJZAV010000109.1 RefSeq gene 6032 6790 . + . ID=gene-LDO49_RS14675;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=LDO49_RS14675;old_locus_tag=BCEP4_1970009 NZ_CAJZAV010000109.1 Protein Homology CDS 6032 6790 . + 0 ID=cds-WP_060070143.1;Parent=gene-LDO49_RS14675;Dbxref=GenBank:WP_060070143.1;Name=WP_060070143.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364793.1;locus_tag=LDO49_RS14675;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_060070143.1;transl_table=11 NZ_CAJZAV010000109.1 RefSeq gene 6783 7775 . + . ID=gene-LDO49_RS14680;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=LDO49_RS14680;old_locus_tag=BCEP4_1970010 NZ_CAJZAV010000109.1 Protein Homology CDS 6783 7775 . + 0 ID=cds-WP_060051706.1;Parent=gene-LDO49_RS14680;Dbxref=GenBank:WP_060051706.1;Name=WP_060051706.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601526.1;locus_tag=LDO49_RS14680;product=lipoyl synthase;protein_id=WP_060051706.1;transl_table=11 NZ_CAJZAV010000109.1 RefSeq gene 8027 9043 . + . ID=gene-LDO49_RS14685;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=LDO49_RS14685;old_locus_tag=BCEP4_1970011 NZ_CAJZAV010000109.1 Protein Homology CDS 8027 9043 . + 0 ID=cds-WP_027789032.1;Parent=gene-LDO49_RS14685;Dbxref=GenBank:WP_027789032.1;Name=WP_027789032.1;Ontology_term=GO:0015734,GO:0015411,GO:0030977,GO:0042597,GO:0055052;gbkey=CDS;gene=tauA;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA,taurine binding|0030977||IEA;go_process=taurine transmembrane transport|0015734||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763294.1;locus_tag=LDO49_RS14685;product=taurine ABC transporter substrate-binding protein;protein_id=WP_027789032.1;transl_table=11 NZ_CAJZAV010000109.1 RefSeq gene 9082 9879 . + . ID=gene-LDO49_RS14690;Name=LDO49_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14690;old_locus_tag=BCEP4_1970012 NZ_CAJZAV010000109.1 Protein Homology CDS 9082 9879 . + 0 ID=cds-WP_060070141.1;Parent=gene-LDO49_RS14690;Dbxref=GenBank:WP_060070141.1;Name=WP_060070141.1;Ontology_term=GO:0015734,GO:0005524,GO:0015411,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type taurine transporter transporter activity|0015411||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=taurine transmembrane transport|0015734||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329291.1;locus_tag=LDO49_RS14690;product=taurine ABC transporter ATP-binding protein;protein_id=WP_060070141.1;transl_table=11 NZ_CAJZAV010000109.1 RefSeq gene 9879 10844 . + . ID=gene-LDO49_RS14695;Name=LDO49_RS14695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14695;old_locus_tag=BCEP4_1970013 NZ_CAJZAV010000109.1 Protein Homology CDS 9879 10844 . + 0 ID=cds-WP_059812026.1;Parent=gene-LDO49_RS14695;Dbxref=GenBank:WP_059812026.1;Name=WP_059812026.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895924.1;locus_tag=LDO49_RS14695;product=ABC transporter permease;protein_id=WP_059812026.1;transl_table=11 NZ_CAJZAV010000109.1 RefSeq gene 10862 11458 . - . ID=gene-LDO49_RS14700;Name=LDO49_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14700;old_locus_tag=BCEP4_1970014 NZ_CAJZAV010000109.1 GeneMarkS-2+ CDS 10862 11458 . - 0 ID=cds-WP_060070139.1;Parent=gene-LDO49_RS14700;Dbxref=GenBank:WP_060070139.1;Name=WP_060070139.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS14700;product=hypothetical protein;protein_id=WP_060070139.1;transl_table=11 NZ_CAJZAV010000109.1 RefSeq gene 11464 13341 . - . ID=gene-LDO49_RS14705;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=LDO49_RS14705;old_locus_tag=BCEP4_1970015 NZ_CAJZAV010000109.1 Protein Homology CDS 11464 13341 . - 0 ID=cds-WP_059621161.1;Parent=gene-LDO49_RS14705;Dbxref=GenBank:WP_059621161.1;Name=WP_059621161.1;Ontology_term=GO:0006750,GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione biosynthetic process|0006750||IEA,glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477697.1;locus_tag=LDO49_RS14705;product=gamma-glutamyltransferase;protein_id=WP_059621161.1;transl_table=11 NZ_CAJZAV010000109.1 RefSeq gene 13413 14375 . - . ID=gene-LDO49_RS14710;Name=LDO49_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14710;old_locus_tag=BCEP4_1970016 NZ_CAJZAV010000109.1 Protein Homology CDS 13413 14375 . - 0 ID=cds-WP_021157042.1;Parent=gene-LDO49_RS14710;Dbxref=GenBank:WP_021157042.1;Name=WP_021157042.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353323.1;locus_tag=LDO49_RS14710;product=LysR family transcriptional regulator;protein_id=WP_021157042.1;transl_table=11 ##sequence-region NZ_CAJZAV010000110.1 1 13173 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000110.1 RefSeq region 1 13173 . + . ID=NZ_CAJZAV010000110.1:1..13173;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_198 NZ_CAJZAV010000110.1 RefSeq pseudogene 1 399 . - . ID=gene-LDO49_RS14715;Name=LDO49_RS14715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS14715;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000110.1 Protein Homology CDS 1 399 . - 0 ID=cds-LDO49_RS14715;Parent=gene-LDO49_RS14715;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544735.1;locus_tag=LDO49_RS14715;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000110.1 RefSeq gene 503 673 . - . ID=gene-LDO49_RS14720;Name=LDO49_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14720;old_locus_tag=BCEP4_1980002 NZ_CAJZAV010000110.1 Protein Homology CDS 503 673 . - 0 ID=cds-WP_004186709.1;Parent=gene-LDO49_RS14720;Dbxref=GenBank:WP_004186709.1;Name=WP_004186709.1;Ontology_term=GO:0043448,GO:0005506,GO:0009055;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=alkane catabolic process|0043448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013436118.1;locus_tag=LDO49_RS14720;product=rubredoxin;protein_id=WP_004186709.1;transl_table=11 NZ_CAJZAV010000110.1 RefSeq gene 927 1793 . + . ID=gene-LDO49_RS14725;Name=LDO49_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14725;old_locus_tag=BCEP4_1980003 NZ_CAJZAV010000110.1 Protein Homology CDS 927 1793 . + 0 ID=cds-WP_027788204.1;Parent=gene-LDO49_RS14725;Dbxref=GenBank:WP_027788204.1;Name=WP_027788204.1;Ontology_term=GO:0009228,GO:0009229,GO:0005524,GO:0008902,GO:0008972;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA,thiamine diphosphate biosynthetic process|0009229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753914.1;locus_tag=LDO49_RS14725;product=hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;protein_id=WP_027788204.1;transl_table=11 NZ_CAJZAV010000110.1 RefSeq gene 1981 3621 . - . ID=gene-LDO49_RS14730;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=LDO49_RS14730;old_locus_tag=BCEP4_1980004 NZ_CAJZAV010000110.1 Protein Homology CDS 1981 3621 . - 0 ID=cds-WP_021163332.1;Parent=gene-LDO49_RS14730;Dbxref=GenBank:WP_021163332.1;Name=WP_021163332.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753915.1;locus_tag=LDO49_RS14730;product=chaperonin GroEL;protein_id=WP_021163332.1;transl_table=11 NZ_CAJZAV010000110.1 RefSeq gene 3668 3961 . - . ID=gene-LDO49_RS14735;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=LDO49_RS14735;old_locus_tag=BCEP4_1980005 NZ_CAJZAV010000110.1 Protein Homology CDS 3668 3961 . - 0 ID=cds-WP_011351136.1;Parent=gene-LDO49_RS14735;Dbxref=GenBank:WP_011351136.1;Name=WP_011351136.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=groES;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544732.1;locus_tag=LDO49_RS14735;product=co-chaperone GroES;protein_id=WP_011351136.1;transl_table=11 NZ_CAJZAV010000110.1 RefSeq pseudogene 4596 4821 . - . ID=gene-LDO49_RS14740;Name=LDO49_RS14740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS14740;partial=true;pseudo=true;start_range=.,4596 NZ_CAJZAV010000110.1 Protein Homology CDS 4596 4821 . - 0 ID=cds-LDO49_RS14740;Parent=gene-LDO49_RS14740;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011695115.1;locus_tag=LDO49_RS14740;partial=true;product=IS481 family transposase;pseudo=true;start_range=.,4596;transl_table=11 NZ_CAJZAV010000110.1 RefSeq gene 6026 6805 . + . ID=gene-LDO49_RS14745;Name=LDO49_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14745;old_locus_tag=BCEP4_1980010 NZ_CAJZAV010000110.1 Protein Homology CDS 6026 6805 . + 0 ID=cds-WP_224051935.1;Parent=gene-LDO49_RS14745;Dbxref=GenBank:WP_224051935.1;Name=WP_224051935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069002.1;locus_tag=LDO49_RS14745;product=DUF2968 domain-containing protein;protein_id=WP_224051935.1;transl_table=11 NZ_CAJZAV010000110.1 RefSeq pseudogene 6944 7225 . + . ID=gene-LDO49_RS14750;Name=LDO49_RS14750;end_range=7225,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS14750;old_locus_tag=BCEP4_1980011;partial=true;pseudo=true;start_range=.,6944 NZ_CAJZAV010000110.1 Protein Homology CDS 6944 7225 . + 0 ID=cds-LDO49_RS14750;Parent=gene-LDO49_RS14750;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=7225,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_083782911.1;locus_tag=LDO49_RS14750;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,6944;transl_table=11 NZ_CAJZAV010000110.1 RefSeq pseudogene 7322 8525 . + . ID=gene-LDO49_RS14755;Name=LDO49_RS14755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS14755;pseudo=true NZ_CAJZAV010000110.1 Protein Homology CDS 7322 8525 . + 0 ID=cds-LDO49_RS14755;Parent=gene-LDO49_RS14755;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611305.1;locus_tag=LDO49_RS14755;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CAJZAV010000110.1 RefSeq pseudogene 8557 9252 . + . ID=gene-LDO49_RS14760;Name=LDO49_RS14760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS14760;old_locus_tag=BCEP4_1980014;partial=true;pseudo=true;start_range=.,8557 NZ_CAJZAV010000110.1 Protein Homology CDS 8557 9252 . + 0 ID=cds-LDO49_RS14760;Parent=gene-LDO49_RS14760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_083782911.1;locus_tag=LDO49_RS14760;partial=true;product=IS4 family transposase;pseudo=true;start_range=.,8557;transl_table=11 NZ_CAJZAV010000110.1 RefSeq gene 9302 10144 . + . ID=gene-LDO49_RS14765;Name=LDO49_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14765;old_locus_tag=BCEP4_1980015 NZ_CAJZAV010000110.1 Protein Homology CDS 9302 10144 . + 0 ID=cds-WP_060073793.1;Parent=gene-LDO49_RS14765;Dbxref=GenBank:WP_060073793.1;Name=WP_060073793.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: protein motif:HMM:NF016908.7;locus_tag=LDO49_RS14765;product=FkbM family methyltransferase;protein_id=WP_060073793.1;transl_table=11 NZ_CAJZAV010000110.1 RefSeq pseudogene 10316 10498 . + . ID=gene-LDO49_RS37540;Name=LDO49_RS37540;end_range=10498,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37540;partial=true;pseudo=true NZ_CAJZAV010000110.1 Protein Homology CDS 10316 10498 . + 0 ID=cds-LDO49_RS37540;Parent=gene-LDO49_RS37540;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=10498,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016908.7;locus_tag=LDO49_RS37540;partial=true;product=FkbM family methyltransferase;pseudo=true;transl_table=11 NZ_CAJZAV010000110.1 RefSeq pseudogene 10605 11030 . + . ID=gene-LDO49_RS14775;Name=LDO49_RS14775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS14775;partial=true;pseudo=true;start_range=.,10605 NZ_CAJZAV010000110.1 Protein Homology CDS 10605 11030 . + 0 ID=cds-LDO49_RS14775;Parent=gene-LDO49_RS14775;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611072.1;locus_tag=LDO49_RS14775;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,10605;transl_table=11 NZ_CAJZAV010000110.1 RefSeq gene 11553 11951 . + . ID=gene-LDO49_RS14780;Name=LDO49_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14780 NZ_CAJZAV010000110.1 GeneMarkS-2+ CDS 11553 11951 . + 0 ID=cds-WP_124843064.1;Parent=gene-LDO49_RS14780;Dbxref=GenBank:WP_124843064.1;Name=WP_124843064.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS14780;product=hypothetical protein;protein_id=WP_124843064.1;transl_table=11 NZ_CAJZAV010000110.1 RefSeq pseudogene 12005 12142 . + . ID=gene-LDO49_RS14785;Name=LDO49_RS14785;end_range=12142,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS14785;old_locus_tag=BCEP4_1980019;partial=true;pseudo=true NZ_CAJZAV010000110.1 Protein Homology CDS 12005 12142 . + 0 ID=cds-LDO49_RS14785;Parent=gene-LDO49_RS14785;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=12142,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_052642687.1;locus_tag=LDO49_RS14785;partial=true;product=IS6 family transposase;pseudo=true;transl_table=11 NZ_CAJZAV010000110.1 RefSeq pseudogene 12201 13173 . - . ID=gene-LDO49_RS14795;Name=LDO49_RS14795;end_range=13173,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS14795;partial=true;pseudo=true NZ_CAJZAV010000110.1 Protein Homology CDS 12201 13173 . - 0 ID=cds-LDO49_RS14795;Parent=gene-LDO49_RS14795;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0015074;end_range=13173,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548482.1;locus_tag=LDO49_RS14795;partial=true;product=DDE-type integrase/transposase/recombinase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000111.1 1 606 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000111.1 RefSeq region 1 606 . + . ID=NZ_CAJZAV010000111.1:1..606;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_199 NZ_CAJZAV010000111.1 RefSeq pseudogene 1 541 . - . ID=gene-LDO49_RS14800;Name=LDO49_RS14800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS14800;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000111.1 Protein Homology CDS 1 541 . - 0 ID=cds-LDO49_RS14800;Parent=gene-LDO49_RS14800;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611281.1;locus_tag=LDO49_RS14800;partial=true;product=transposase;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAV010000112.1 1 25569 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000112.1 RefSeq region 1 25569 . + . ID=NZ_CAJZAV010000112.1:1..25569;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_2 NZ_CAJZAV010000112.1 RefSeq gene 1 2250 . - . ID=gene-LDO49_RS14805;Name=LDO49_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14805;partial=true;start_range=.,1 NZ_CAJZAV010000112.1 Protein Homology CDS 1 2250 . - 0 ID=cds-WP_224051936.1;Parent=gene-LDO49_RS14805;Dbxref=GenBank:WP_224051936.1;Name=WP_224051936.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495094.1;locus_tag=LDO49_RS14805;partial=true;product=ABC transporter ATP-binding protein;protein_id=WP_224051936.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000112.1 RefSeq gene 2370 3329 . + . ID=gene-LDO49_RS14810;Name=LDO49_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14810;old_locus_tag=BCEP4_20002 NZ_CAJZAV010000112.1 Protein Homology CDS 2370 3329 . + 0 ID=cds-WP_042976269.1;Parent=gene-LDO49_RS14810;Dbxref=GenBank:WP_042976269.1;Name=WP_042976269.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486231.1;locus_tag=LDO49_RS14810;product=LysR family transcriptional regulator;protein_id=WP_042976269.1;transl_table=11 NZ_CAJZAV010000112.1 RefSeq gene 3377 3748 . - . ID=gene-LDO49_RS14815;Name=LDO49_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14815;old_locus_tag=BCEP4_20003 NZ_CAJZAV010000112.1 Protein Homology CDS 3377 3748 . - 0 ID=cds-WP_021161362.1;Parent=gene-LDO49_RS14815;Dbxref=GenBank:WP_021161362.1;Name=WP_021161362.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495095.1;locus_tag=LDO49_RS14815;product=MAPEG family protein;protein_id=WP_021161362.1;transl_table=11 NZ_CAJZAV010000112.1 RefSeq gene 4050 5171 . + . ID=gene-LDO49_RS14820;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=LDO49_RS14820;old_locus_tag=BCEP4_20004 NZ_CAJZAV010000112.1 Protein Homology CDS 4050 5171 . + 0 ID=cds-WP_060071536.1;Parent=gene-LDO49_RS14820;Dbxref=GenBank:WP_060071536.1;Name=WP_060071536.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899697.1;locus_tag=LDO49_RS14820;product=alanine racemase;protein_id=WP_060071536.1;transl_table=11 NZ_CAJZAV010000112.1 RefSeq gene 5323 6117 . - . ID=gene-LDO49_RS14825;Name=LDO49_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14825;old_locus_tag=BCEP4_20005 NZ_CAJZAV010000112.1 Protein Homology CDS 5323 6117 . - 0 ID=cds-WP_042976285.1;Parent=gene-LDO49_RS14825;Dbxref=GenBank:WP_042976285.1;Name=WP_042976285.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486235.1;locus_tag=LDO49_RS14825;product=enoyl-CoA hydratase;protein_id=WP_042976285.1;transl_table=11 NZ_CAJZAV010000112.1 RefSeq gene 6267 6632 . - . ID=gene-LDO49_RS14830;Name=LDO49_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14830;old_locus_tag=BCEP4_20006 NZ_CAJZAV010000112.1 Protein Homology CDS 6267 6632 . - 0 ID=cds-WP_443797957.1;Parent=gene-LDO49_RS14830;Dbxref=GenBank:WP_443797957.1;Name=WP_443797957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355564.1;locus_tag=LDO49_RS14830;product=DUF3592 domain-containing protein;protein_id=WP_443797957.1;transl_table=11 NZ_CAJZAV010000112.1 RefSeq gene 6724 7311 . - . ID=gene-LDO49_RS14835;Name=LDO49_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14835;old_locus_tag=BCEP4_20007 NZ_CAJZAV010000112.1 GeneMarkS-2+ CDS 6724 7311 . - 0 ID=cds-WP_059651022.1;Parent=gene-LDO49_RS14835;Dbxref=GenBank:WP_059651022.1;Name=WP_059651022.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS14835;product=hypothetical protein;protein_id=WP_059651022.1;transl_table=11 NZ_CAJZAV010000112.1 RefSeq gene 7451 8356 . - . ID=gene-LDO49_RS14840;Name=LDO49_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14840;old_locus_tag=BCEP4_20008 NZ_CAJZAV010000112.1 Protein Homology CDS 7451 8356 . - 0 ID=cds-WP_060071534.1;Parent=gene-LDO49_RS14840;Dbxref=GenBank:WP_060071534.1;Name=WP_060071534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355570.1;locus_tag=LDO49_RS14840;product=LysR family transcriptional regulator;protein_id=WP_060071534.1;transl_table=11 NZ_CAJZAV010000112.1 RefSeq gene 8447 8977 . + . ID=gene-LDO49_RS14845;Name=LDO49_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14845;old_locus_tag=BCEP4_20009 NZ_CAJZAV010000112.1 Protein Homology CDS 8447 8977 . + 0 ID=cds-WP_048026016.1;Parent=gene-LDO49_RS14845;Dbxref=GenBank:WP_048026016.1;Name=WP_048026016.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696506.1;locus_tag=LDO49_RS14845;product=DMT family transporter;protein_id=WP_048026016.1;transl_table=11 NZ_CAJZAV010000112.1 RefSeq gene 9018 9383 . - . ID=gene-LDO49_RS14850;Name=LDO49_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14850;old_locus_tag=BCEP4_20010 NZ_CAJZAV010000112.1 Protein Homology CDS 9018 9383 . - 0 ID=cds-WP_011355572.1;Parent=gene-LDO49_RS14850;Dbxref=GenBank:WP_011355572.1;Name=WP_011355572.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759394.1;locus_tag=LDO49_RS14850;product=response regulator;protein_id=WP_011355572.1;transl_table=11 NZ_CAJZAV010000112.1 RefSeq gene 9419 10378 . - . ID=gene-LDO49_RS14855;Name=LDO49_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14855;old_locus_tag=BCEP4_20011 NZ_CAJZAV010000112.1 Protein Homology CDS 9419 10378 . - 0 ID=cds-WP_042976276.1;Parent=gene-LDO49_RS14855;Dbxref=GenBank:WP_042976276.1;Name=WP_042976276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495102.1;locus_tag=LDO49_RS14855;product=chemotaxis protein CheX;protein_id=WP_042976276.1;transl_table=11 NZ_CAJZAV010000112.1 RefSeq gene 10411 10992 . - . ID=gene-LDO49_RS14860;Name=LDO49_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14860;old_locus_tag=BCEP4_20012 NZ_CAJZAV010000112.1 Protein Homology CDS 10411 10992 . - 0 ID=cds-WP_059814466.1;Parent=gene-LDO49_RS14860;Dbxref=GenBank:WP_059814466.1;Name=WP_059814466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495103.1;locus_tag=LDO49_RS14860;product=hypothetical protein;protein_id=WP_059814466.1;transl_table=11 NZ_CAJZAV010000112.1 RefSeq gene 10989 11729 . - . ID=gene-LDO49_RS14865;Name=LDO49_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14865;old_locus_tag=BCEP4_20013 NZ_CAJZAV010000112.1 Protein Homology CDS 10989 11729 . - 0 ID=cds-WP_372585846.1;Parent=gene-LDO49_RS14865;Dbxref=GenBank:WP_372585846.1;Name=WP_372585846.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658488.1;locus_tag=LDO49_RS14865;product=methyl-accepting chemotaxis protein;protein_id=WP_372585846.1;transl_table=11 NZ_CAJZAV010000112.1 RefSeq gene 11740 14112 . - . ID=gene-LDO49_RS14870;Name=LDO49_RS14870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14870;old_locus_tag=BCEP4_20014 NZ_CAJZAV010000112.1 Protein Homology CDS 11740 14112 . - 0 ID=cds-WP_060071530.1;Parent=gene-LDO49_RS14870;Dbxref=GenBank:WP_060071530.1;Name=WP_060071530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491138.1;locus_tag=LDO49_RS14870;product=MCP four helix bundle domain-containing protein;protein_id=WP_060071530.1;transl_table=11 NZ_CAJZAV010000112.1 RefSeq gene 14565 16295 . - . ID=gene-LDO49_RS14875;Name=LDO49_RS14875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14875;old_locus_tag=BCEP4_20015 NZ_CAJZAV010000112.1 Protein Homology CDS 14565 16295 . - 0 ID=cds-WP_060071526.1;Parent=gene-LDO49_RS14875;Dbxref=GenBank:WP_060071526.1;Name=WP_060071526.1;Ontology_term=GO:0006847,GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;go_process=plasma membrane acetate transport|0006847||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004635416.1;locus_tag=LDO49_RS14875;product=cation acetate symporter;protein_id=WP_060071526.1;transl_table=11 NZ_CAJZAV010000112.1 RefSeq gene 16292 16600 . - . ID=gene-LDO49_RS14880;Name=LDO49_RS14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14880;old_locus_tag=BCEP4_20016 NZ_CAJZAV010000112.1 Protein Homology CDS 16292 16600 . - 0 ID=cds-WP_021161374.1;Parent=gene-LDO49_RS14880;Dbxref=GenBank:WP_021161374.1;Name=WP_021161374.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004635419.1;locus_tag=LDO49_RS14880;product=DUF485 domain-containing protein;protein_id=WP_021161374.1;transl_table=11 NZ_CAJZAV010000112.1 RefSeq gene 16873 17556 . + . ID=gene-LDO49_RS14885;Name=LDO49_RS14885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14885;old_locus_tag=BCEP4_20017 NZ_CAJZAV010000112.1 Protein Homology CDS 16873 17556 . + 0 ID=cds-WP_060071523.1;Parent=gene-LDO49_RS14885;Dbxref=GenBank:WP_060071523.1;Name=WP_060071523.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495107.1;locus_tag=LDO49_RS14885;product=alpha/beta hydrolase;protein_id=WP_060071523.1;transl_table=11 NZ_CAJZAV010000112.1 RefSeq gene 17607 19118 . - . ID=gene-LDO49_RS14890;Name=LDO49_RS14890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14890;old_locus_tag=BCEP4_20018 NZ_CAJZAV010000112.1 Protein Homology CDS 17607 19118 . - 0 ID=cds-WP_060056156.1;Parent=gene-LDO49_RS14890;Dbxref=GenBank:WP_060056156.1;Name=WP_060056156.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491141.1;locus_tag=LDO49_RS14890;product=amino acid permease;protein_id=WP_060056156.1;transl_table=11 NZ_CAJZAV010000112.1 RefSeq gene 19225 20631 . - . ID=gene-LDO49_RS14895;Name=LDO49_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14895;old_locus_tag=BCEP4_20019 NZ_CAJZAV010000112.1 Protein Homology CDS 19225 20631 . - 0 ID=cds-WP_021161379.1;Parent=gene-LDO49_RS14895;Dbxref=GenBank:WP_021161379.1;Name=WP_021161379.1;Ontology_term=GO:0006099,GO:0006531,GO:0008797,GO:0042802;gbkey=CDS;go_function=aspartate ammonia-lyase activity|0008797||IEA,identical protein binding|0042802||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,aspartate metabolic process|0006531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355581.1;locus_tag=LDO49_RS14895;product=aspartate ammonia-lyase;protein_id=WP_021161379.1;transl_table=11 NZ_CAJZAV010000112.1 RefSeq gene 20773 21747 . + . ID=gene-LDO49_RS14900;Name=LDO49_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14900;old_locus_tag=BCEP4_20020 NZ_CAJZAV010000112.1 Protein Homology CDS 20773 21747 . + 0 ID=cds-WP_060071520.1;Parent=gene-LDO49_RS14900;Dbxref=GenBank:WP_060071520.1;Name=WP_060071520.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338402.1;locus_tag=LDO49_RS14900;product=LysR family transcriptional regulator;protein_id=WP_060071520.1;transl_table=11 NZ_CAJZAV010000112.1 RefSeq gene 21850 22914 . - . ID=gene-LDO49_RS14905;Name=LDO49_RS14905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14905;old_locus_tag=BCEP4_20021 NZ_CAJZAV010000112.1 Protein Homology CDS 21850 22914 . - 0 ID=cds-WP_060071517.1;Parent=gene-LDO49_RS14905;Dbxref=GenBank:WP_060071517.1;Name=WP_060071517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759441.1;locus_tag=LDO49_RS14905;product=asparaginase;protein_id=WP_060071517.1;transl_table=11 NZ_CAJZAV010000112.1 RefSeq gene 23237 25477 . + . ID=gene-LDO49_RS14910;Name=LDO49_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14910;old_locus_tag=BCEP4_20022 NZ_CAJZAV010000112.1 Protein Homology CDS 23237 25477 . + 0 ID=cds-WP_059858979.1;Parent=gene-LDO49_RS14910;Dbxref=GenBank:WP_059858979.1;Name=WP_059858979.1;Ontology_term=GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689336.1;locus_tag=LDO49_RS14910;product=TonB-dependent receptor;protein_id=WP_059858979.1;transl_table=11 ##sequence-region NZ_CAJZAV010000113.1 1 6814 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000113.1 RefSeq region 1 6814 . + . ID=NZ_CAJZAV010000113.1:1..6814;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_20 NZ_CAJZAV010000113.1 RefSeq gene 1 716 . - . ID=gene-LDO49_RS14915;Name=LDO49_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14915;partial=true;start_range=.,1 NZ_CAJZAV010000113.1 Protein Homology CDS 1 716 . - 0 ID=cds-WP_224051937.1;Parent=gene-LDO49_RS14915;Dbxref=GenBank:WP_224051937.1;Name=WP_224051937.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493180.1;locus_tag=LDO49_RS14915;partial=true;product=MFS transporter;protein_id=WP_224051937.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000113.1 RefSeq gene 870 1340 . + . ID=gene-LDO49_RS14920;Name=LDO49_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14920;old_locus_tag=BCEP4_200002 NZ_CAJZAV010000113.1 Protein Homology CDS 870 1340 . + 0 ID=cds-WP_175851814.1;Parent=gene-LDO49_RS14920;Dbxref=GenBank:WP_175851814.1;Name=WP_175851814.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355858.1;locus_tag=LDO49_RS14920;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_175851814.1;transl_table=11 NZ_CAJZAV010000113.1 RefSeq gene 1409 2344 . + . ID=gene-LDO49_RS14925;Name=LDO49_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14925;old_locus_tag=BCEP4_200003 NZ_CAJZAV010000113.1 Protein Homology CDS 1409 2344 . + 0 ID=cds-WP_060071349.1;Parent=gene-LDO49_RS14925;Dbxref=GenBank:WP_060071349.1;Name=WP_060071349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355857.1;locus_tag=LDO49_RS14925;product=hypothetical protein;protein_id=WP_060071349.1;transl_table=11 NZ_CAJZAV010000113.1 RefSeq gene 2355 3803 . - . ID=gene-LDO49_RS14930;Name=LDO49_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14930;old_locus_tag=BCEP4_200004 NZ_CAJZAV010000113.1 Protein Homology CDS 2355 3803 . - 0 ID=cds-WP_060071352.1;Parent=gene-LDO49_RS14930;Dbxref=GenBank:WP_060071352.1;Name=WP_060071352.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413094.1;locus_tag=LDO49_RS14930;product=MFS transporter;protein_id=WP_060071352.1;transl_table=11 NZ_CAJZAV010000113.1 RefSeq gene 4136 4909 . - . ID=gene-LDO49_RS14935;Name=LDO49_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14935;old_locus_tag=BCEP4_200005 NZ_CAJZAV010000113.1 Protein Homology CDS 4136 4909 . - 0 ID=cds-WP_059484092.1;Parent=gene-LDO49_RS14935;Dbxref=GenBank:WP_059484092.1;Name=WP_059484092.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761934.1;locus_tag=LDO49_RS14935;product=helix-turn-helix transcriptional regulator;protein_id=WP_059484092.1;transl_table=11 NZ_CAJZAV010000113.1 RefSeq gene 4945 5286 . - . ID=gene-LDO49_RS14940;Name=LDO49_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14940;old_locus_tag=BCEP4_200006 NZ_CAJZAV010000113.1 Protein Homology CDS 4945 5286 . - 0 ID=cds-WP_021164331.1;Parent=gene-LDO49_RS14940;Dbxref=GenBank:WP_021164331.1;Name=WP_021164331.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004537279.1;locus_tag=LDO49_RS14940;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_021164331.1;transl_table=11 NZ_CAJZAV010000113.1 RefSeq gene 5868 6785 . + . ID=gene-LDO49_RS14945;Name=LDO49_RS14945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14945;old_locus_tag=BCEP4_200007 NZ_CAJZAV010000113.1 Protein Homology CDS 5868 6785 . + 0 ID=cds-WP_059484191.1;Parent=gene-LDO49_RS14945;Dbxref=GenBank:WP_059484191.1;Name=WP_059484191.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479473.1;locus_tag=LDO49_RS14945;product=metal-dependent hydrolase;protein_id=WP_059484191.1;transl_table=11 ##sequence-region NZ_CAJZAV010000114.1 1 4615 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000114.1 RefSeq region 1 4615 . + . ID=NZ_CAJZAV010000114.1:1..4615;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_200 NZ_CAJZAV010000114.1 RefSeq pseudogene 73 613 . + . ID=gene-LDO49_RS37395;Name=LDO49_RS37395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37395;pseudo=true NZ_CAJZAV010000114.1 Protein Homology CDS 73 613 . + 0 ID=cds-LDO49_RS37395;Parent=gene-LDO49_RS37395;Note=frameshifted;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699891.1;locus_tag=LDO49_RS37395;product=transposase;pseudo=true;transl_table=11 NZ_CAJZAV010000114.1 RefSeq gene 589 939 . + . ID=gene-LDO49_RS14955;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=LDO49_RS14955;old_locus_tag=BCEP4_2000003 NZ_CAJZAV010000114.1 Protein Homology CDS 589 939 . + 0 ID=cds-WP_060147766.1;Parent=gene-LDO49_RS14955;Dbxref=GenBank:WP_060147766.1;Name=WP_060147766.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.6;locus_tag=LDO49_RS14955;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_060147766.1;transl_table=11 NZ_CAJZAV010000114.1 RefSeq pseudogene 971 2483 . + . ID=gene-LDO49_RS14960;Name=tnpC;gbkey=Gene;gene=tnpC;gene_biotype=pseudogene;locus_tag=LDO49_RS14960;pseudo=true NZ_CAJZAV010000114.1 Protein Homology CDS 971 2483 . + 0 ID=cds-LDO49_RS14960;Parent=gene-LDO49_RS14960;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875269.1;locus_tag=LDO49_RS14960;product=IS66 family transposase;pseudo=true;transl_table=11 NZ_CAJZAV010000114.1 RefSeq gene 2529 3170 . + . ID=gene-LDO49_RS14965;Name=LDO49_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14965;old_locus_tag=BCEP4_2000007 NZ_CAJZAV010000114.1 Protein Homology CDS 2529 3170 . + 0 ID=cds-WP_060147764.1;Parent=gene-LDO49_RS14965;Dbxref=GenBank:WP_060147764.1;Name=WP_060147764.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697490.1;locus_tag=LDO49_RS14965;product=glutathione S-transferase family protein;protein_id=WP_060147764.1;transl_table=11 NZ_CAJZAV010000114.1 RefSeq gene 3910 4248 . + . ID=gene-LDO49_RS37545;Name=LDO49_RS37545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37545 NZ_CAJZAV010000114.1 Protein Homology CDS 3910 4248 . + 0 ID=cds-WP_372585847.1;Parent=gene-LDO49_RS37545;Dbxref=GenBank:WP_372585847.1;Name=WP_372585847.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046631.2;locus_tag=LDO49_RS37545;product=DUF6968 family protein;protein_id=WP_372585847.1;transl_table=11 ##sequence-region NZ_CAJZAV010000115.1 1 9469 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000115.1 RefSeq region 1 9469 . + . ID=NZ_CAJZAV010000115.1:1..9469;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_201 NZ_CAJZAV010000115.1 RefSeq gene 93 548 . - . ID=gene-LDO49_RS14970;Name=LDO49_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14970;old_locus_tag=BCEP4_2010001 NZ_CAJZAV010000115.1 Protein Homology CDS 93 548 . - 0 ID=cds-WP_027789419.1;Parent=gene-LDO49_RS14970;Dbxref=GenBank:WP_027789419.1;Name=WP_027789419.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485425.1;locus_tag=LDO49_RS14970;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_027789419.1;transl_table=11 NZ_CAJZAV010000115.1 RefSeq gene 722 3406 . + . ID=gene-LDO49_RS14975;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=LDO49_RS14975;old_locus_tag=BCEP4_2010002 NZ_CAJZAV010000115.1 Protein Homology CDS 722 3406 . + 0 ID=cds-WP_060074769.1;Parent=gene-LDO49_RS14975;Dbxref=GenBank:WP_060074769.1;Name=WP_060074769.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496896.1;locus_tag=LDO49_RS14975;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_060074769.1;transl_table=11 NZ_CAJZAV010000115.1 RefSeq gene 3463 4986 . - . ID=gene-LDO49_RS14980;Name=LDO49_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14980;old_locus_tag=BCEP4_2010003 NZ_CAJZAV010000115.1 Protein Homology CDS 3463 4986 . - 0 ID=cds-WP_060074770.1;Parent=gene-LDO49_RS14980;Dbxref=GenBank:WP_060074770.1;Name=WP_060074770.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493447.1;locus_tag=LDO49_RS14980;product=efflux transporter outer membrane subunit;protein_id=WP_060074770.1;transl_table=11 NZ_CAJZAV010000115.1 RefSeq gene 4983 8156 . - . ID=gene-LDO49_RS14985;Name=LDO49_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14985;old_locus_tag=BCEP4_2010004 NZ_CAJZAV010000115.1 Protein Homology CDS 4983 8156 . - 0 ID=cds-WP_124475873.1;Parent=gene-LDO49_RS14985;Dbxref=GenBank:WP_124475873.1;Name=WP_124475873.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752586.1;locus_tag=LDO49_RS14985;product=efflux RND transporter permease subunit;protein_id=WP_124475873.1;transl_table=11 NZ_CAJZAV010000115.1 RefSeq gene 8170 9100 . - . ID=gene-LDO49_RS14990;Name=LDO49_RS14990;end_range=9100,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14990;old_locus_tag=BCEP4_2010005;partial=true NZ_CAJZAV010000115.1 Protein Homology CDS 8170 9100 . - 1 ID=cds-WP_443797958.1;Parent=gene-LDO49_RS14990;Dbxref=GenBank:WP_443797958.1;Name=WP_443797958.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;end_range=9100,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409853.1;locus_tag=LDO49_RS14990;partial=true;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_443797958.1;transl_table=11 NZ_CAJZAV010000115.1 RefSeq pseudogene 9111 9332 . - . ID=gene-LDO49_RS38065;Name=LDO49_RS38065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38065;old_locus_tag=BCEP4_2010006;partial=true;pseudo=true;start_range=.,9111 NZ_CAJZAV010000115.1 Protein Homology CDS 9111 9332 . - 0 ID=cds-LDO49_RS38065;Parent=gene-LDO49_RS38065;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409853.1;locus_tag=LDO49_RS38065;partial=true;product=efflux RND transporter periplasmic adaptor subunit;pseudo=true;start_range=.,9111;transl_table=11 ##sequence-region NZ_CAJZAV010000116.1 1 5450 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000116.1 RefSeq region 1 5450 . + . ID=NZ_CAJZAV010000116.1:1..5450;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_202 NZ_CAJZAV010000116.1 RefSeq gene 157 570 . + . ID=gene-LDO49_RS14995;Name=LDO49_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS14995;old_locus_tag=BCEP4_2020001;partial=true;start_range=.,157 NZ_CAJZAV010000116.1 Protein Homology CDS 157 570 . + 0 ID=cds-WP_224051940.1;Parent=gene-LDO49_RS14995;Dbxref=GenBank:WP_224051940.1;Name=WP_224051940.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351987.1;locus_tag=LDO49_RS14995;partial=true;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_224051940.1;start_range=.,157;transl_table=11 NZ_CAJZAV010000116.1 RefSeq gene 752 1387 . - . ID=gene-LDO49_RS15000;Name=LDO49_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15000;old_locus_tag=BCEP4_2020003 NZ_CAJZAV010000116.1 GeneMarkS-2+ CDS 752 1387 . - 0 ID=cds-WP_060073346.1;Parent=gene-LDO49_RS15000;Dbxref=GenBank:WP_060073346.1;Name=WP_060073346.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS15000;product=hypothetical protein;protein_id=WP_060073346.1;transl_table=11 NZ_CAJZAV010000116.1 RefSeq gene 1482 2483 . - . ID=gene-LDO49_RS15005;Name=LDO49_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15005;old_locus_tag=BCEP4_2020005 NZ_CAJZAV010000116.1 GeneMarkS-2+ CDS 1482 2483 . - 0 ID=cds-WP_224051942.1;Parent=gene-LDO49_RS15005;Dbxref=GenBank:WP_224051942.1;Name=WP_224051942.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS15005;product=hypothetical protein;protein_id=WP_224051942.1;transl_table=11 NZ_CAJZAV010000116.1 RefSeq gene 2746 3048 . - . ID=gene-LDO49_RS15010;Name=LDO49_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15010;old_locus_tag=BCEP4_2020006 NZ_CAJZAV010000116.1 Protein Homology CDS 2746 3048 . - 0 ID=cds-WP_185633982.1;Parent=gene-LDO49_RS15010;Dbxref=GenBank:WP_185633982.1;Name=WP_185633982.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025477.6;locus_tag=LDO49_RS15010;product=immunity 22 family protein;protein_id=WP_185633982.1;transl_table=11 NZ_CAJZAV010000116.1 RefSeq gene 3723 4427 . - . ID=gene-LDO49_RS15015;Name=LDO49_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15015;old_locus_tag=BCEP4_2020007 NZ_CAJZAV010000116.1 Protein Homology CDS 3723 4427 . - 0 ID=cds-WP_059677813.1;Parent=gene-LDO49_RS15015;Dbxref=GenBank:WP_059677813.1;Name=WP_059677813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363895.1;locus_tag=LDO49_RS15015;product=glutathione binding-like protein;protein_id=WP_059677813.1;transl_table=11 NZ_CAJZAV010000116.1 RefSeq gene 4627 5450 . - . ID=gene-LDO49_RS15020;Name=LDO49_RS15020;end_range=5450,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15020;old_locus_tag=BCEP4_2020008;partial=true NZ_CAJZAV010000116.1 Protein Homology CDS 4627 5450 . - 2 ID=cds-WP_224051943.1;Parent=gene-LDO49_RS15020;Dbxref=GenBank:WP_224051943.1;Name=WP_224051943.1;Ontology_term=GO:0015288,GO:0009279;end_range=5450,.;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481520.1;locus_tag=LDO49_RS15020;partial=true;product=porin;protein_id=WP_224051943.1;transl_table=11 ##sequence-region NZ_CAJZAV010000117.1 1 3663 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000117.1 RefSeq region 1 3663 . + . ID=NZ_CAJZAV010000117.1:1..3663;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_203 NZ_CAJZAV010000117.1 RefSeq pseudogene 1 196 . + . ID=gene-LDO49_RS15025;Name=LDO49_RS15025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS15025;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000117.1 Protein Homology CDS 1 196 . + 1 ID=cds-LDO49_RS15025;Parent=gene-LDO49_RS15025;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350707.1;locus_tag=LDO49_RS15025;partial=true;product=RNA 2'%2C3'-cyclic phosphodiesterase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000117.1 RefSeq gene 570 1904 . - . ID=gene-LDO49_RS15030;Name=LDO49_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15030;old_locus_tag=BCEP4_2030002 NZ_CAJZAV010000117.1 Protein Homology CDS 570 1904 . - 0 ID=cds-WP_224051944.1;Parent=gene-LDO49_RS15030;Dbxref=GenBank:WP_224051944.1;Name=WP_224051944.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212584.1;locus_tag=LDO49_RS15030;product=D-amino acid dehydrogenase;protein_id=WP_224051944.1;transl_table=11 NZ_CAJZAV010000117.1 RefSeq gene 1930 3192 . - . ID=gene-LDO49_RS15035;Name=LDO49_RS15035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15035;old_locus_tag=BCEP4_2030003 NZ_CAJZAV010000117.1 Protein Homology CDS 1930 3192 . - 0 ID=cds-WP_027788552.1;Parent=gene-LDO49_RS15035;Dbxref=GenBank:WP_027788552.1;Name=WP_027788552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546618.1;locus_tag=LDO49_RS15035;product=MFS transporter;protein_id=WP_027788552.1;transl_table=11 NZ_CAJZAV010000117.1 RefSeq gene 3431 3663 . - . ID=gene-LDO49_RS15040;Name=LDO49_RS15040;end_range=3663,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15040;partial=true NZ_CAJZAV010000117.1 Protein Homology CDS 3431 3663 . - 2 ID=cds-WP_224051945.1;Parent=gene-LDO49_RS15040;Dbxref=GenBank:WP_224051945.1;Name=WP_224051945.1;end_range=3663,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492303.1;locus_tag=LDO49_RS15040;partial=true;product=SDR family oxidoreductase;protein_id=WP_224051945.1;transl_table=11 ##sequence-region NZ_CAJZAV010000118.1 1 18419 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000118.1 RefSeq region 1 18419 . + . ID=NZ_CAJZAV010000118.1:1..18419;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_204 NZ_CAJZAV010000118.1 RefSeq gene 1 500 . + . ID=gene-LDO49_RS15045;Name=LDO49_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15045;old_locus_tag=BCEP4_2040001;partial=true;start_range=.,1 NZ_CAJZAV010000118.1 Protein Homology CDS 1 500 . + 2 ID=cds-WP_224051946.1;Parent=gene-LDO49_RS15045;Dbxref=GenBank:WP_224051946.1;Name=WP_224051946.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478352.1;locus_tag=LDO49_RS15045;partial=true;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_224051946.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000118.1 RefSeq gene 778 1446 . - . ID=gene-LDO49_RS15050;Name=LDO49_RS15050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15050;old_locus_tag=BCEP4_2040002 NZ_CAJZAV010000118.1 GeneMarkS-2+ CDS 778 1446 . - 0 ID=cds-WP_224051947.1;Parent=gene-LDO49_RS15050;Dbxref=GenBank:WP_224051947.1;Name=WP_224051947.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS15050;product=hypothetical protein;protein_id=WP_224051947.1;transl_table=11 NZ_CAJZAV010000118.1 RefSeq gene 1657 1959 . + . ID=gene-LDO49_RS15055;Name=LDO49_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15055;old_locus_tag=BCEP4_2040004 NZ_CAJZAV010000118.1 GeneMarkS-2+ CDS 1657 1959 . + 0 ID=cds-WP_124843889.1;Parent=gene-LDO49_RS15055;Dbxref=GenBank:WP_124843889.1;Name=WP_124843889.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS15055;product=hypothetical protein;protein_id=WP_124843889.1;transl_table=11 NZ_CAJZAV010000118.1 RefSeq gene 1971 2711 . + . ID=gene-LDO49_RS15060;Name=LDO49_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15060;old_locus_tag=BCEP4_2040005 NZ_CAJZAV010000118.1 Protein Homology CDS 1971 2711 . + 0 ID=cds-WP_109341505.1;Parent=gene-LDO49_RS15060;Dbxref=GenBank:WP_109341505.1;Name=WP_109341505.1;Ontology_term=GO:0006270,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication initiation|0006270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009242021.1;locus_tag=LDO49_RS15060;product=replication initiation protein;protein_id=WP_109341505.1;transl_table=11 NZ_CAJZAV010000118.1 RefSeq gene 2714 3055 . + . ID=gene-LDO49_RS15065;Name=LDO49_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15065;old_locus_tag=BCEP4_2040006 NZ_CAJZAV010000118.1 GeneMarkS-2+ CDS 2714 3055 . + 0 ID=cds-WP_109341504.1;Parent=gene-LDO49_RS15065;Dbxref=GenBank:WP_109341504.1;Name=WP_109341504.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS15065;product=hypothetical protein;protein_id=WP_109341504.1;transl_table=11 NZ_CAJZAV010000118.1 RefSeq gene 3052 5223 . + . ID=gene-LDO49_RS15070;Name=LDO49_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15070;old_locus_tag=BCEP4_2040007 NZ_CAJZAV010000118.1 Protein Homology CDS 3052 5223 . + 0 ID=cds-WP_224051948.1;Parent=gene-LDO49_RS15070;Dbxref=GenBank:WP_224051948.1;Name=WP_224051948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917959.1;locus_tag=LDO49_RS15070;product=DotA/TraY family protein;protein_id=WP_224051948.1;transl_table=11 NZ_CAJZAV010000118.1 RefSeq gene 5233 5769 . + . ID=gene-LDO49_RS15075;Name=LDO49_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15075;old_locus_tag=BCEP4_2040008 NZ_CAJZAV010000118.1 Protein Homology CDS 5233 5769 . + 0 ID=cds-WP_224051950.1;Parent=gene-LDO49_RS15075;Dbxref=GenBank:WP_224051950.1;Name=WP_224051950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004541357.1;locus_tag=LDO49_RS15075;product=hypothetical protein;protein_id=WP_224051950.1;transl_table=11 NZ_CAJZAV010000118.1 RefSeq gene 6350 7351 . + . ID=gene-LDO49_RS15080;Name=LDO49_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15080;old_locus_tag=BCEP4_2040009 NZ_CAJZAV010000118.1 Protein Homology CDS 6350 7351 . + 0 ID=cds-WP_224051952.1;Parent=gene-LDO49_RS15080;Dbxref=GenBank:WP_224051952.1;Name=WP_224051952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013954408.1;locus_tag=LDO49_RS15080;product=ABC-three component system protein;protein_id=WP_224051952.1;transl_table=11 NZ_CAJZAV010000118.1 RefSeq gene 7339 7854 . + . ID=gene-LDO49_RS15085;Name=LDO49_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15085;old_locus_tag=BCEP4_2040010 NZ_CAJZAV010000118.1 Protein Homology CDS 7339 7854 . + 0 ID=cds-WP_308043885.1;Parent=gene-LDO49_RS15085;Dbxref=GenBank:WP_308043885.1;Name=WP_308043885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013954409.1;locus_tag=LDO49_RS15085;product=ABC-three component system middle component 2;protein_id=WP_308043885.1;transl_table=11 NZ_CAJZAV010000118.1 RefSeq gene 7851 9716 . + . ID=gene-LDO49_RS15090;Name=LDO49_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15090;old_locus_tag=BCEP4_2040011 NZ_CAJZAV010000118.1 Protein Homology CDS 7851 9716 . + 0 ID=cds-WP_224051955.1;Parent=gene-LDO49_RS15090;Dbxref=GenBank:WP_224051955.1;Name=WP_224051955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013954410.1;locus_tag=LDO49_RS15090;product=hypothetical protein;protein_id=WP_224051955.1;transl_table=11 NZ_CAJZAV010000118.1 RefSeq gene 9869 12214 . - . ID=gene-LDO49_RS15095;Name=LDO49_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15095;old_locus_tag=BCEP4_2040013 NZ_CAJZAV010000118.1 Protein Homology CDS 9869 12214 . - 0 ID=cds-WP_224051956.1;Parent=gene-LDO49_RS15095;Dbxref=GenBank:WP_224051956.1;Name=WP_224051956.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019313.6;locus_tag=LDO49_RS15095;product=KAP family P-loop NTPase fold protein;protein_id=WP_224051956.1;transl_table=11 NZ_CAJZAV010000118.1 RefSeq gene 12211 12543 . - . ID=gene-LDO49_RS15100;Name=LDO49_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15100 NZ_CAJZAV010000118.1 Protein Homology CDS 12211 12543 . - 0 ID=cds-WP_224051958.1;Parent=gene-LDO49_RS15100;Dbxref=GenBank:WP_224051958.1;Name=WP_224051958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875783.1;locus_tag=LDO49_RS15100;product=hypothetical protein;protein_id=WP_224051958.1;transl_table=11 NZ_CAJZAV010000118.1 RefSeq gene 12647 12955 . - . ID=gene-LDO49_RS15105;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=LDO49_RS15105;old_locus_tag=BCEP4_2040016 NZ_CAJZAV010000118.1 Protein Homology CDS 12647 12955 . - 0 ID=cds-WP_157130377.1;Parent=gene-LDO49_RS15105;Dbxref=GenBank:WP_157130377.1;Name=WP_157130377.1;Ontology_term=GO:0006355;gbkey=CDS;gene=mobA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007183074.1;locus_tag=LDO49_RS15105;product=plasmid mobilization protein MobA;protein_id=WP_157130377.1;transl_table=11 NZ_CAJZAV010000118.1 RefSeq gene 14596 15645 . - . ID=gene-LDO49_RS15110;Name=LDO49_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15110;old_locus_tag=BCEP4_2040019 NZ_CAJZAV010000118.1 Protein Homology CDS 14596 15645 . - 0 ID=cds-WP_224051959.1;Parent=gene-LDO49_RS15110;Dbxref=GenBank:WP_224051959.1;Name=WP_224051959.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014616775.1;locus_tag=LDO49_RS15110;product=site-specific integrase;protein_id=WP_224051959.1;transl_table=11 NZ_CAJZAV010000118.1 RefSeq gene 15802 15876 . - . ID=gene-LDO49_RS15115;Name=LDO49_RS15115;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS15115;old_locus_tag=BCEP4_TRNA28 NZ_CAJZAV010000118.1 tRNAscan-SE tRNA 15802 15876 . - . ID=rna-LDO49_RS15115;Parent=gene-LDO49_RS15115;anticodon=(pos:complement(15842..15844));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS15115;product=tRNA-Val NZ_CAJZAV010000118.1 tRNAscan-SE exon 15802 15876 . - . ID=exon-LDO49_RS15115-1;Parent=rna-LDO49_RS15115;anticodon=(pos:complement(15842..15844));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS15115;product=tRNA-Val NZ_CAJZAV010000118.1 RefSeq gene 15977 16879 . - . ID=gene-LDO49_RS15120;Name=LDO49_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15120;old_locus_tag=BCEP4_2040022 NZ_CAJZAV010000118.1 Protein Homology CDS 15977 16879 . - 0 ID=cds-WP_027786944.1;Parent=gene-LDO49_RS15120;Dbxref=GenBank:WP_027786944.1;Name=WP_027786944.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331845.1;locus_tag=LDO49_RS15120;product=LysR family transcriptional regulator;protein_id=WP_027786944.1;transl_table=11 NZ_CAJZAV010000118.1 RefSeq gene 17054 18419 . + . ID=gene-LDO49_RS15125;Name=LDO49_RS15125;end_range=18419,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15125;partial=true NZ_CAJZAV010000118.1 Protein Homology CDS 17054 18419 . + 0 ID=cds-WP_224051960.1;Parent=gene-LDO49_RS15125;Dbxref=GenBank:WP_224051960.1;Name=WP_224051960.1;Ontology_term=GO:0016627;end_range=18419,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415158.1;locus_tag=LDO49_RS15125;partial=true;product=acyl-CoA dehydrogenase family protein;protein_id=WP_224051960.1;transl_table=11 ##sequence-region NZ_CAJZAV010000119.1 1 10838 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000119.1 RefSeq region 1 10838 . + . ID=NZ_CAJZAV010000119.1:1..10838;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_205 NZ_CAJZAV010000119.1 RefSeq gene 1 934 . - . ID=gene-LDO49_RS15130;Name=LDO49_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15130;partial=true;start_range=.,1 NZ_CAJZAV010000119.1 Protein Homology CDS 1 934 . - 0 ID=cds-WP_224051961.1;Parent=gene-LDO49_RS15130;Dbxref=GenBank:WP_224051961.1;Name=WP_224051961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363463.1;locus_tag=LDO49_RS15130;partial=true;product=FAD binding domain-containing protein;protein_id=WP_224051961.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000119.1 RefSeq gene 974 1849 . - . ID=gene-LDO49_RS15135;Name=LDO49_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15135;old_locus_tag=BCEP4_2050002 NZ_CAJZAV010000119.1 Protein Homology CDS 974 1849 . - 0 ID=cds-WP_059587589.1;Parent=gene-LDO49_RS15135;Dbxref=GenBank:WP_059587589.1;Name=WP_059587589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761598.1;locus_tag=LDO49_RS15135;product=alpha/beta fold hydrolase;protein_id=WP_059587589.1;transl_table=11 NZ_CAJZAV010000119.1 RefSeq gene 2143 2862 . - . ID=gene-LDO49_RS15140;Name=LDO49_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15140;old_locus_tag=BCEP4_2050003 NZ_CAJZAV010000119.1 Protein Homology CDS 2143 2862 . - 0 ID=cds-WP_060147973.1;Parent=gene-LDO49_RS15140;Dbxref=GenBank:WP_060147973.1;Name=WP_060147973.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726116.1;locus_tag=LDO49_RS15140;product=TetR/AcrR family transcriptional regulator;protein_id=WP_060147973.1;transl_table=11 NZ_CAJZAV010000119.1 RefSeq gene 3207 3938 . + . ID=gene-LDO49_RS15145;Name=LDO49_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15145;old_locus_tag=BCEP4_2050004 NZ_CAJZAV010000119.1 Protein Homology CDS 3207 3938 . + 0 ID=cds-WP_048027023.1;Parent=gene-LDO49_RS15145;Dbxref=GenBank:WP_048027023.1;Name=WP_048027023.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007743213.1;locus_tag=LDO49_RS15145;product=YoaK family protein;protein_id=WP_048027023.1;transl_table=11 NZ_CAJZAV010000119.1 RefSeq gene 3987 4928 . + . ID=gene-LDO49_RS15150;Name=LDO49_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15150;old_locus_tag=BCEP4_2050006 NZ_CAJZAV010000119.1 Protein Homology CDS 3987 4928 . + 0 ID=cds-WP_021158249.1;Parent=gene-LDO49_RS15150;Dbxref=GenBank:WP_021158249.1;Name=WP_021158249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758728.1;locus_tag=LDO49_RS15150;product=hypothetical protein;protein_id=WP_021158249.1;transl_table=11 NZ_CAJZAV010000119.1 RefSeq gene 4943 6403 . + . ID=gene-LDO49_RS15155;Name=LDO49_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15155;old_locus_tag=BCEP4_2050005 NZ_CAJZAV010000119.1 Protein Homology CDS 4943 6403 . + 0 ID=cds-WP_060148012.1;Parent=gene-LDO49_RS15155;Dbxref=GenBank:WP_060148012.1;Name=WP_060148012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337468.1;locus_tag=LDO49_RS15155;product=alginate export family protein;protein_id=WP_060148012.1;transl_table=11 NZ_CAJZAV010000119.1 RefSeq gene 6442 7347 . - . ID=gene-LDO49_RS15160;Name=LDO49_RS15160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15160;old_locus_tag=BCEP4_2050008 NZ_CAJZAV010000119.1 Protein Homology CDS 6442 7347 . - 0 ID=cds-WP_021158251.1;Parent=gene-LDO49_RS15160;Dbxref=GenBank:WP_021158251.1;Name=WP_021158251.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545679.1;locus_tag=LDO49_RS15160;product=LysR family transcriptional regulator;protein_id=WP_021158251.1;transl_table=11 NZ_CAJZAV010000119.1 RefSeq gene 7468 8118 . + . ID=gene-LDO49_RS15165;Name=LDO49_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15165;old_locus_tag=BCEP4_2050007 NZ_CAJZAV010000119.1 Protein Homology CDS 7468 8118 . + 0 ID=cds-WP_060148014.1;Parent=gene-LDO49_RS15165;Dbxref=GenBank:WP_060148014.1;Name=WP_060148014.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020068435.1;locus_tag=LDO49_RS15165;product=DsbA family oxidoreductase;protein_id=WP_060148014.1;transl_table=11 NZ_CAJZAV010000119.1 RefSeq gene 8254 9225 . + . ID=gene-LDO49_RS15170;Name=LDO49_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15170;old_locus_tag=BCEP4_2050009 NZ_CAJZAV010000119.1 Protein Homology CDS 8254 9225 . + 0 ID=cds-WP_372585848.1;Parent=gene-LDO49_RS15170;Dbxref=GenBank:WP_372585848.1;Name=WP_372585848.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100299.1;locus_tag=LDO49_RS15170;product=MBL fold metallo-hydrolase;protein_id=WP_372585848.1;transl_table=11 NZ_CAJZAV010000119.1 RefSeq gene 9295 10209 . - . ID=gene-LDO49_RS15175;Name=LDO49_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15175;old_locus_tag=BCEP4_2050010 NZ_CAJZAV010000119.1 Protein Homology CDS 9295 10209 . - 0 ID=cds-WP_059485794.1;Parent=gene-LDO49_RS15175;Dbxref=GenBank:WP_059485794.1;Name=WP_059485794.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498483.1;locus_tag=LDO49_RS15175;product=helix-turn-helix domain-containing protein;protein_id=WP_059485794.1;transl_table=11 NZ_CAJZAV010000119.1 RefSeq gene 10321 10838 . + . ID=gene-LDO49_RS15180;Name=LDO49_RS15180;end_range=10838,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15180;partial=true NZ_CAJZAV010000119.1 Protein Homology CDS 10321 10838 . + 0 ID=cds-WP_224051963.1;Parent=gene-LDO49_RS15180;Dbxref=GenBank:WP_224051963.1;Name=WP_224051963.1;Ontology_term=GO:0003677;end_range=10838,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751572.1;locus_tag=LDO49_RS15180;partial=true;product=winged helix-turn-helix domain-containing protein;protein_id=WP_224051963.1;transl_table=11 ##sequence-region NZ_CAJZAV010000120.1 1 7287 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000120.1 RefSeq region 1 7287 . + . ID=NZ_CAJZAV010000120.1:1..7287;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_206 NZ_CAJZAV010000120.1 RefSeq gene 1 215 . + . ID=gene-LDO49_RS15185;Name=LDO49_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15185;old_locus_tag=BCEP4_2060001;partial=true;start_range=.,1 NZ_CAJZAV010000120.1 Protein Homology CDS 1 215 . + 2 ID=cds-WP_224051964.1;Parent=gene-LDO49_RS15185;Dbxref=GenBank:WP_224051964.1;Name=WP_224051964.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558340.1;locus_tag=LDO49_RS15185;partial=true;product=transposase;protein_id=WP_224051964.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000120.1 RefSeq gene 391 750 . - . ID=gene-LDO49_RS15190;Name=LDO49_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15190;old_locus_tag=BCEP4_2060002 NZ_CAJZAV010000120.1 Protein Homology CDS 391 750 . - 0 ID=cds-WP_060073301.1;Parent=gene-LDO49_RS15190;Dbxref=GenBank:WP_060073301.1;Name=WP_060073301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893756.1;locus_tag=LDO49_RS15190;product=DUF6277 family protein;protein_id=WP_060073301.1;transl_table=11 NZ_CAJZAV010000120.1 RefSeq pseudogene 809 1575 . - . ID=gene-LDO49_RS15195;Name=LDO49_RS15195;end_range=1575,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS15195;partial=true;pseudo=true NZ_CAJZAV010000120.1 Protein Homology CDS 809 1575 . - 0 ID=cds-LDO49_RS15195;Parent=gene-LDO49_RS15195;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1575,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190265.1;locus_tag=LDO49_RS15195;partial=true;product=ImcF-related family protein;pseudo=true;transl_table=11 NZ_CAJZAV010000120.1 RefSeq gene 1631 2020 . - . ID=gene-LDO49_RS15200;Name=LDO49_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15200;old_locus_tag=BCEP4_2060005 NZ_CAJZAV010000120.1 Protein Homology CDS 1631 2020 . - 0 ID=cds-WP_081067302.1;Parent=gene-LDO49_RS15200;Dbxref=GenBank:WP_081067302.1;Name=WP_081067302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190606.1;locus_tag=LDO49_RS15200;product=DUF4150 domain-containing protein;protein_id=WP_081067302.1;transl_table=11 NZ_CAJZAV010000120.1 RefSeq gene 2057 2689 . - . ID=gene-LDO49_RS15205;Name=LDO49_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15205 NZ_CAJZAV010000120.1 Protein Homology CDS 2057 2689 . - 0 ID=cds-WP_060073308.1;Parent=gene-LDO49_RS15205;Dbxref=GenBank:WP_060073308.1;Name=WP_060073308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017843703.1;locus_tag=LDO49_RS15205;product=DUF3540 domain-containing protein;protein_id=WP_060073308.1;transl_table=11 NZ_CAJZAV010000120.1 RefSeq gene 2673 3755 . - . ID=gene-LDO49_RS15210;Name=LDO49_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15210;old_locus_tag=BCEP4_2060007 NZ_CAJZAV010000120.1 Protein Homology CDS 2673 3755 . - 0 ID=cds-WP_060073310.1;Parent=gene-LDO49_RS15210;Dbxref=GenBank:WP_060073310.1;Name=WP_060073310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202229.1;locus_tag=LDO49_RS15210;product=pentapeptide repeat-containing protein;protein_id=WP_060073310.1;transl_table=11 NZ_CAJZAV010000120.1 RefSeq gene 3752 5971 . - . ID=gene-LDO49_RS15215;Name=LDO49_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15215;old_locus_tag=BCEP4_2060008 NZ_CAJZAV010000120.1 Protein Homology CDS 3752 5971 . - 0 ID=cds-WP_060073312.1;Parent=gene-LDO49_RS15215;Dbxref=GenBank:WP_060073312.1;Name=WP_060073312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331438.1;locus_tag=LDO49_RS15215;product=DUF2169 family type VI secretion system accessory protein;protein_id=WP_060073312.1;transl_table=11 NZ_CAJZAV010000120.1 RefSeq pseudogene 6001 7287 . - . ID=gene-LDO49_RS15220;Name=LDO49_RS15220;end_range=7287,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS15220;old_locus_tag=BCEP4_2060009;partial=true;pseudo=true NZ_CAJZAV010000120.1 Protein Homology CDS 6001 7287 . - 0 ID=cds-LDO49_RS15220;Parent=gene-LDO49_RS15220;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=7287,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602557.1;locus_tag=LDO49_RS15220;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000121.1 1 28381 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000121.1 RefSeq region 1 28381 . + . ID=NZ_CAJZAV010000121.1:1..28381;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_207 NZ_CAJZAV010000121.1 RefSeq gene 47 745 . - . ID=gene-LDO49_RS15225;Name=LDO49_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15225;old_locus_tag=BCEP4_2070001 NZ_CAJZAV010000121.1 Protein Homology CDS 47 745 . - 0 ID=cds-WP_224051966.1;Parent=gene-LDO49_RS15225;Dbxref=GenBank:WP_224051966.1;Name=WP_224051966.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755639.1;locus_tag=LDO49_RS15225;product=TetR/AcrR family transcriptional regulator;protein_id=WP_224051966.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 1076 1498 . - . ID=gene-LDO49_RS15230;Name=LDO49_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15230;old_locus_tag=BCEP4_2070002 NZ_CAJZAV010000121.1 Protein Homology CDS 1076 1498 . - 0 ID=cds-WP_021159256.1;Parent=gene-LDO49_RS15230;Dbxref=GenBank:WP_021159256.1;Name=WP_021159256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355344.1;locus_tag=LDO49_RS15230;product=cupin domain-containing protein;protein_id=WP_021159256.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 1509 1946 . - . ID=gene-LDO49_RS15235;Name=LDO49_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15235;old_locus_tag=BCEP4_2070003 NZ_CAJZAV010000121.1 Protein Homology CDS 1509 1946 . - 0 ID=cds-WP_021159255.1;Parent=gene-LDO49_RS15235;Dbxref=GenBank:WP_021159255.1;Name=WP_021159255.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099649.1;locus_tag=LDO49_RS15235;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_021159255.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 2041 3525 . - . ID=gene-LDO49_RS15240;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=LDO49_RS15240;old_locus_tag=BCEP4_2070004 NZ_CAJZAV010000121.1 Protein Homology CDS 2041 3525 . - 0 ID=cds-WP_224051968.1;Parent=gene-LDO49_RS15240;Dbxref=GenBank:WP_224051968.1;Name=WP_224051968.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485811.1;locus_tag=LDO49_RS15240;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_224051968.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 3753 4670 . + . ID=gene-LDO49_RS15245;Name=LDO49_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15245;old_locus_tag=BCEP4_2070005 NZ_CAJZAV010000121.1 Protein Homology CDS 3753 4670 . + 0 ID=cds-WP_021159253.1;Parent=gene-LDO49_RS15245;Dbxref=GenBank:WP_021159253.1;Name=WP_021159253.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365969.1;locus_tag=LDO49_RS15245;product=LysR family transcriptional regulator;protein_id=WP_021159253.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 4817 5566 . + . ID=gene-LDO49_RS15250;Name=LDO49_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15250;old_locus_tag=BCEP4_2070006 NZ_CAJZAV010000121.1 Protein Homology CDS 4817 5566 . + 0 ID=cds-WP_021159252.1;Parent=gene-LDO49_RS15250;Dbxref=GenBank:WP_021159252.1;Name=WP_021159252.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338255.1;locus_tag=LDO49_RS15250;product=SDR family oxidoreductase;protein_id=WP_021159252.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 5642 7276 . - . ID=gene-LDO49_RS15255;Name=LDO49_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15255;old_locus_tag=BCEP4_2070007 NZ_CAJZAV010000121.1 Protein Homology CDS 5642 7276 . - 0 ID=cds-WP_224051970.1;Parent=gene-LDO49_RS15255;Dbxref=GenBank:WP_224051970.1;Name=WP_224051970.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479139.1;locus_tag=LDO49_RS15255;product=glycoside hydrolase family 32 protein;protein_id=WP_224051970.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 7452 9029 . - . ID=gene-LDO49_RS15260;Name=LDO49_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15260;old_locus_tag=BCEP4_2070009 NZ_CAJZAV010000121.1 Protein Homology CDS 7452 9029 . - 0 ID=cds-WP_059650794.1;Parent=gene-LDO49_RS15260;Dbxref=GenBank:WP_059650794.1;Name=WP_059650794.1;Ontology_term=GO:0009758,GO:0050053;gbkey=CDS;go_function=levansucrase activity|0050053||IEA;go_process=carbohydrate utilization|0009758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338253.1;locus_tag=LDO49_RS15260;product=glycoside hydrolase family 68 protein;protein_id=WP_059650794.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 9217 10257 . + . ID=gene-LDO49_RS15265;Name=LDO49_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15265;old_locus_tag=BCEP4_2070010 NZ_CAJZAV010000121.1 Protein Homology CDS 9217 10257 . + 0 ID=cds-WP_224051971.1;Parent=gene-LDO49_RS15265;Dbxref=GenBank:WP_224051971.1;Name=WP_224051971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338252.1;locus_tag=LDO49_RS15265;product=substrate-binding domain-containing protein;protein_id=WP_224051971.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 10644 11330 . + . ID=gene-LDO49_RS15270;Name=LDO49_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15270;old_locus_tag=BCEP4_2070012 NZ_CAJZAV010000121.1 Protein Homology CDS 10644 11330 . + 0 ID=cds-WP_124474694.1;Parent=gene-LDO49_RS15270;Dbxref=GenBank:WP_124474694.1;Name=WP_124474694.1;Ontology_term=GO:0019172;gbkey=CDS;go_function=glyoxalase III activity|0019172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397181.1;locus_tag=LDO49_RS15270;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_124474694.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 11472 12581 . + . ID=gene-LDO49_RS15275;Name=LDO49_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15275;old_locus_tag=BCEP4_2070013 NZ_CAJZAV010000121.1 Protein Homology CDS 11472 12581 . + 0 ID=cds-WP_021159246.1;Parent=gene-LDO49_RS15275;Dbxref=GenBank:WP_021159246.1;Name=WP_021159246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494940.1;locus_tag=LDO49_RS15275;product=NADH:flavin oxidoreductase/NADH oxidase;protein_id=WP_021159246.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 12706 13776 . + . ID=gene-LDO49_RS15280;Name=LDO49_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15280;old_locus_tag=BCEP4_2070014 NZ_CAJZAV010000121.1 Protein Homology CDS 12706 13776 . + 0 ID=cds-WP_124474695.1;Parent=gene-LDO49_RS15280;Dbxref=GenBank:WP_124474695.1;Name=WP_124474695.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485660.1;locus_tag=LDO49_RS15280;product=AI-2E family transporter;protein_id=WP_124474695.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 13988 14362 . + . ID=gene-LDO49_RS15285;Name=LDO49_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15285;old_locus_tag=BCEP4_2070015 NZ_CAJZAV010000121.1 Protein Homology CDS 13988 14362 . + 0 ID=cds-WP_049097651.1;Parent=gene-LDO49_RS15285;Dbxref=GenBank:WP_049097651.1;Name=WP_049097651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494939.1;locus_tag=LDO49_RS15285;product=hypothetical protein;protein_id=WP_049097651.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 14390 15184 . - . ID=gene-LDO49_RS15290;Name=LDO49_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15290;old_locus_tag=BCEP4_2070016 NZ_CAJZAV010000121.1 Protein Homology CDS 14390 15184 . - 0 ID=cds-WP_124474696.1;Parent=gene-LDO49_RS15290;Dbxref=GenBank:WP_124474696.1;Name=WP_124474696.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603553.1;locus_tag=LDO49_RS15290;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_124474696.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 15355 16200 . + . ID=gene-LDO49_RS15295;Name=LDO49_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15295;old_locus_tag=BCEP4_2070017 NZ_CAJZAV010000121.1 Protein Homology CDS 15355 16200 . + 0 ID=cds-WP_124474697.1;Parent=gene-LDO49_RS15295;Dbxref=GenBank:WP_124474697.1;Name=WP_124474697.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411630.1;locus_tag=LDO49_RS15295;product=helix-turn-helix transcriptional regulator;protein_id=WP_124474697.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 16225 16812 . - . ID=gene-LDO49_RS15300;Name=LDO49_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15300;old_locus_tag=BCEP4_2070018 NZ_CAJZAV010000121.1 Protein Homology CDS 16225 16812 . - 0 ID=cds-WP_021159242.1;Parent=gene-LDO49_RS15300;Dbxref=GenBank:WP_021159242.1;Name=WP_021159242.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009900746.1;locus_tag=LDO49_RS15300;product=LysE family translocator;protein_id=WP_021159242.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 16910 18376 . - . ID=gene-LDO49_RS15305;Name=LDO49_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15305;old_locus_tag=BCEP4_2070019 NZ_CAJZAV010000121.1 Protein Homology CDS 16910 18376 . - 0 ID=cds-WP_124841326.1;Parent=gene-LDO49_RS15305;Dbxref=GenBank:WP_124841326.1;Name=WP_124841326.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547792.1;locus_tag=LDO49_RS15305;product=heavy metal sensor histidine kinase;protein_id=WP_124841326.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 18373 19068 . - . ID=gene-LDO49_RS15310;Name=LDO49_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15310;old_locus_tag=BCEP4_2070020 NZ_CAJZAV010000121.1 Protein Homology CDS 18373 19068 . - 0 ID=cds-WP_021159240.1;Parent=gene-LDO49_RS15310;Dbxref=GenBank:WP_021159240.1;Name=WP_021159240.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882131.1;locus_tag=LDO49_RS15310;product=heavy metal response regulator transcription factor;protein_id=WP_021159240.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 19097 20608 . - . ID=gene-LDO49_RS15315;Name=LDO49_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15315;old_locus_tag=BCEP4_2070021 NZ_CAJZAV010000121.1 Protein Homology CDS 19097 20608 . - 0 ID=cds-WP_224051973.1;Parent=gene-LDO49_RS15315;Dbxref=GenBank:WP_224051973.1;Name=WP_224051973.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547790.1;locus_tag=LDO49_RS15315;product=efflux transporter outer membrane subunit;protein_id=WP_224051973.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 20614 21843 . - . ID=gene-LDO49_RS15320;Name=LDO49_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15320;old_locus_tag=BCEP4_2070022 NZ_CAJZAV010000121.1 Protein Homology CDS 20614 21843 . - 0 ID=cds-WP_021159238.1;Parent=gene-LDO49_RS15320;Dbxref=GenBank:WP_021159238.1;Name=WP_021159238.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658725.1;locus_tag=LDO49_RS15320;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_021159238.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 21883 25050 . - . ID=gene-LDO49_RS15325;Name=LDO49_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15325;old_locus_tag=BCEP4_2070023 NZ_CAJZAV010000121.1 Protein Homology CDS 21883 25050 . - 0 ID=cds-WP_059484985.1;Parent=gene-LDO49_RS15325;Dbxref=GenBank:WP_059484985.1;Name=WP_059484985.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492928.1;locus_tag=LDO49_RS15325;product=efflux RND transporter permease subunit;protein_id=WP_059484985.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 25289 26044 . - . ID=gene-LDO49_RS15330;Name=LDO49_RS15330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15330;old_locus_tag=BCEP4_2070025 NZ_CAJZAV010000121.1 Protein Homology CDS 25289 26044 . - 0 ID=cds-WP_021159235.1;Parent=gene-LDO49_RS15330;Dbxref=GenBank:WP_021159235.1;Name=WP_021159235.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760008.1;locus_tag=LDO49_RS15330;product=Crp/Fnr family transcriptional regulator;protein_id=WP_021159235.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 26213 27865 . + . ID=gene-LDO49_RS15335;Name=LDO49_RS15335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15335;old_locus_tag=BCEP4_2070024 NZ_CAJZAV010000121.1 Protein Homology CDS 26213 27865 . + 0 ID=cds-WP_042974869.1;Parent=gene-LDO49_RS15335;Dbxref=GenBank:WP_042974869.1;Name=WP_042974869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547786.1;locus_tag=LDO49_RS15335;product=acyl-CoA synthetase;protein_id=WP_042974869.1;transl_table=11 NZ_CAJZAV010000121.1 RefSeq gene 27916 28381 . - . ID=gene-LDO49_RS15340;Name=LDO49_RS15340;end_range=28381,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15340;old_locus_tag=BCEP4_2070026;partial=true NZ_CAJZAV010000121.1 Protein Homology CDS 27916 28381 . - 1 ID=cds-WP_224051972.1;Parent=gene-LDO49_RS15340;Dbxref=GenBank:WP_224051972.1;Name=WP_224051972.1;Ontology_term=GO:0007165,GO:0016020;end_range=28381,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397154.1;locus_tag=LDO49_RS15340;partial=true;product=methyl-accepting chemotaxis protein;protein_id=WP_224051972.1;transl_table=11 ##sequence-region NZ_CAJZAV010000122.1 1 32139 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000122.1 RefSeq region 1 32139 . + . ID=NZ_CAJZAV010000122.1:1..32139;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_208 NZ_CAJZAV010000122.1 RefSeq gene 1 389 . - . ID=gene-LDO49_RS15345;Name=LDO49_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15345;partial=true;start_range=.,1 NZ_CAJZAV010000122.1 Protein Homology CDS 1 389 . - 0 ID=cds-WP_224051974.1;Parent=gene-LDO49_RS15345;Dbxref=GenBank:WP_224051974.1;Name=WP_224051974.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410146.1;locus_tag=LDO49_RS15345;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_224051974.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 448 789 . - . ID=gene-LDO49_RS15350;Name=LDO49_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15350;old_locus_tag=BCEP4_2080002 NZ_CAJZAV010000122.1 Protein Homology CDS 448 789 . - 0 ID=cds-WP_060072286.1;Parent=gene-LDO49_RS15350;Dbxref=GenBank:WP_060072286.1;Name=WP_060072286.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491133.1;locus_tag=LDO49_RS15350;product=GNAT family N-acetyltransferase;protein_id=WP_060072286.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 1060 2586 . + . ID=gene-LDO49_RS15355;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=LDO49_RS15355;old_locus_tag=BCEP4_2080003 NZ_CAJZAV010000122.1 Protein Homology CDS 1060 2586 . + 0 ID=cds-WP_224051975.1;Parent=gene-LDO49_RS15355;Dbxref=GenBank:WP_224051975.1;Name=WP_224051975.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493060.1;locus_tag=LDO49_RS15355;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_224051975.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 3112 6006 . + . ID=gene-LDO49_RS15360;Name=LDO49_RS15360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15360;old_locus_tag=BCEP4_2080004 NZ_CAJZAV010000122.1 Protein Homology CDS 3112 6006 . + 0 ID=cds-WP_124475741.1;Parent=gene-LDO49_RS15360;Dbxref=GenBank:WP_124475741.1;Name=WP_124475741.1;Ontology_term=GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355588.1;locus_tag=LDO49_RS15360;product=GH92 family glycosyl hydrolase;protein_id=WP_124475741.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 6408 6806 . + . ID=gene-LDO49_RS15365;Name=LDO49_RS15365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15365;old_locus_tag=BCEP4_2080006 NZ_CAJZAV010000122.1 Protein Homology CDS 6408 6806 . + 0 ID=cds-WP_021157640.1;Parent=gene-LDO49_RS15365;Dbxref=GenBank:WP_021157640.1;Name=WP_021157640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399779.1;locus_tag=LDO49_RS15365;product=nuclear transport factor 2 family protein;protein_id=WP_021157640.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 6968 8785 . + . ID=gene-LDO49_RS15370;Name=xsc;gbkey=Gene;gene=xsc;gene_biotype=protein_coding;locus_tag=LDO49_RS15370;old_locus_tag=BCEP4_2080008 NZ_CAJZAV010000122.1 Protein Homology CDS 6968 8785 . + 0 ID=cds-WP_059494990.1;Parent=gene-LDO49_RS15370;Dbxref=GenBank:WP_059494990.1;Name=WP_059494990.1;Ontology_term=GO:0019529,GO:0000287,GO:0030976,GO:0050487,GO:0005737;gbkey=CDS;gene=xsc;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,sulfoacetaldehyde acetyltransferase activity|0050487||IEA;go_process=taurine catabolic process|0019529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403857.1;locus_tag=LDO49_RS15370;product=sulfoacetaldehyde acetyltransferase;protein_id=WP_059494990.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 8923 9957 . + . ID=gene-LDO49_RS15375;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=LDO49_RS15375;old_locus_tag=BCEP4_2080010 NZ_CAJZAV010000122.1 Protein Homology CDS 8923 9957 . + 0 ID=cds-WP_060072292.1;Parent=gene-LDO49_RS15375;Dbxref=GenBank:WP_060072292.1;Name=WP_060072292.1;Ontology_term=GO:0006086,GO:0008959;gbkey=CDS;gene=pta;go_function=phosphate acetyltransferase activity|0008959||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399776.1;locus_tag=LDO49_RS15375;product=phosphate acetyltransferase;protein_id=WP_060072292.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 9954 10721 . + . ID=gene-LDO49_RS15380;Name=LDO49_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15380;old_locus_tag=BCEP4_2080009 NZ_CAJZAV010000122.1 Protein Homology CDS 9954 10721 . + 0 ID=cds-WP_027791255.1;Parent=gene-LDO49_RS15380;Dbxref=GenBank:WP_027791255.1;Name=WP_027791255.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011492557.1;locus_tag=LDO49_RS15380;product=sulfite exporter TauE/SafE family protein;protein_id=WP_027791255.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 10798 12519 . - . ID=gene-LDO49_RS15385;Name=LDO49_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15385;old_locus_tag=BCEP4_2080011 NZ_CAJZAV010000122.1 Protein Homology CDS 10798 12519 . - 0 ID=cds-WP_224051976.1;Parent=gene-LDO49_RS15385;Dbxref=GenBank:WP_224051976.1;Name=WP_224051976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493256.1;locus_tag=LDO49_RS15385;product=cobaltochelatase CobT-related protein;protein_id=WP_224051976.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 12516 13508 . - . ID=gene-LDO49_RS15390;Name=LDO49_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15390;old_locus_tag=BCEP4_2080012 NZ_CAJZAV010000122.1 Protein Homology CDS 12516 13508 . - 0 ID=cds-WP_059622049.1;Parent=gene-LDO49_RS15390;Dbxref=GenBank:WP_059622049.1;Name=WP_059622049.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399773.1;locus_tag=LDO49_RS15390;product=AAA family ATPase;protein_id=WP_059622049.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 13719 14471 . + . ID=gene-LDO49_RS15395;Name=LDO49_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15395;old_locus_tag=BCEP4_2080013 NZ_CAJZAV010000122.1 Protein Homology CDS 13719 14471 . + 0 ID=cds-WP_059484216.1;Parent=gene-LDO49_RS15395;Dbxref=GenBank:WP_059484216.1;Name=WP_059484216.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403862.1;locus_tag=LDO49_RS15395;product=IclR family transcriptional regulator;protein_id=WP_059484216.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 14498 15445 . - . ID=gene-LDO49_RS15400;Name=LDO49_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15400;old_locus_tag=BCEP4_2080014 NZ_CAJZAV010000122.1 Protein Homology CDS 14498 15445 . - 0 ID=cds-WP_059706247.1;Parent=gene-LDO49_RS15400;Dbxref=GenBank:WP_059706247.1;Name=WP_059706247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188558.1;locus_tag=LDO49_RS15400;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_059706247.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 15483 16229 . - . ID=gene-LDO49_RS15405;Name=LDO49_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15405;old_locus_tag=BCEP4_2080015 NZ_CAJZAV010000122.1 Protein Homology CDS 15483 16229 . - 0 ID=cds-WP_059591871.1;Parent=gene-LDO49_RS15405;Dbxref=GenBank:WP_059591871.1;Name=WP_059591871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410978.1;locus_tag=LDO49_RS15405;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_059591871.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 16246 19182 . - . ID=gene-LDO49_RS15410;Name=LDO49_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15410;old_locus_tag=BCEP4_2080016 NZ_CAJZAV010000122.1 Protein Homology CDS 16246 19182 . - 0 ID=cds-WP_224051977.1;Parent=gene-LDO49_RS15410;Dbxref=GenBank:WP_224051977.1;Name=WP_224051977.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399769.1;locus_tag=LDO49_RS15410;product=molybdopterin oxidoreductase family protein;protein_id=WP_224051977.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 19406 20830 . - . ID=gene-LDO49_RS15415;Name=LDO49_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15415;old_locus_tag=BCEP4_2080017 NZ_CAJZAV010000122.1 Protein Homology CDS 19406 20830 . - 0 ID=cds-WP_021157629.1;Parent=gene-LDO49_RS15415;Dbxref=GenBank:WP_021157629.1;Name=WP_021157629.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403866.1;locus_tag=LDO49_RS15415;product=amino acid permease;protein_id=WP_021157629.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 21031 22446 . - . ID=gene-LDO49_RS15420;Name=LDO49_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15420;old_locus_tag=BCEP4_2080019 NZ_CAJZAV010000122.1 Protein Homology CDS 21031 22446 . - 0 ID=cds-WP_021157628.1;Parent=gene-LDO49_RS15420;Dbxref=GenBank:WP_021157628.1;Name=WP_021157628.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355600.1;locus_tag=LDO49_RS15420;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_021157628.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 22969 24273 . - . ID=gene-LDO49_RS15425;Name=LDO49_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15425;old_locus_tag=BCEP4_2080020 NZ_CAJZAV010000122.1 Protein Homology CDS 22969 24273 . - 0 ID=cds-WP_224051978.1;Parent=gene-LDO49_RS15425;Dbxref=GenBank:WP_224051978.1;Name=WP_224051978.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355601.1;locus_tag=LDO49_RS15425;product=MFS transporter;protein_id=WP_224051978.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 24402 26057 . - . ID=gene-LDO49_RS15430;Name=LDO49_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15430;old_locus_tag=BCEP4_2080022 NZ_CAJZAV010000122.1 Protein Homology CDS 24402 26057 . - 0 ID=cds-WP_060072304.1;Parent=gene-LDO49_RS15430;Dbxref=GenBank:WP_060072304.1;Name=WP_060072304.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217226.1;locus_tag=LDO49_RS15430;product=GMC family oxidoreductase;protein_id=WP_060072304.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 26246 27070 . + . ID=gene-LDO49_RS15435;Name=LDO49_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15435;old_locus_tag=BCEP4_2080023 NZ_CAJZAV010000122.1 Protein Homology CDS 26246 27070 . + 0 ID=cds-WP_124922351.1;Parent=gene-LDO49_RS15435;Dbxref=GenBank:WP_124922351.1;Name=WP_124922351.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495186.1;locus_tag=LDO49_RS15435;product=IclR family transcriptional regulator;protein_id=WP_124922351.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 27227 27574 . - . ID=gene-LDO49_RS15440;Name=LDO49_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15440;old_locus_tag=BCEP4_2080024 NZ_CAJZAV010000122.1 Protein Homology CDS 27227 27574 . - 0 ID=cds-WP_060072308.1;Parent=gene-LDO49_RS15440;Dbxref=GenBank:WP_060072308.1;Name=WP_060072308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338406.1;locus_tag=LDO49_RS15440;product=hypothetical protein;protein_id=WP_060072308.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 27690 28712 . - . ID=gene-LDO49_RS15445;Name=LDO49_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15445;old_locus_tag=BCEP4_2080025 NZ_CAJZAV010000122.1 Protein Homology CDS 27690 28712 . - 0 ID=cds-WP_224051979.1;Parent=gene-LDO49_RS15445;Dbxref=GenBank:WP_224051979.1;Name=WP_224051979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491312.1;locus_tag=LDO49_RS15445;product=DUF2891 domain-containing protein;protein_id=WP_224051979.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 28732 29682 . - . ID=gene-LDO49_RS15450;Name=LDO49_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15450;old_locus_tag=BCEP4_2080026 NZ_CAJZAV010000122.1 Protein Homology CDS 28732 29682 . - 0 ID=cds-WP_224051980.1;Parent=gene-LDO49_RS15450;Dbxref=GenBank:WP_224051980.1;Name=WP_224051980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399760.1;locus_tag=LDO49_RS15450;product=DUF979 domain-containing protein;protein_id=WP_224051980.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 29679 30368 . - . ID=gene-LDO49_RS15455;Name=LDO49_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15455;old_locus_tag=BCEP4_2080027 NZ_CAJZAV010000122.1 Protein Homology CDS 29679 30368 . - 0 ID=cds-WP_021157620.1;Parent=gene-LDO49_RS15455;Dbxref=GenBank:WP_021157620.1;Name=WP_021157620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658477.1;locus_tag=LDO49_RS15455;product=DUF969 domain-containing protein;protein_id=WP_021157620.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 30705 30929 . + . ID=gene-LDO49_RS15460;Name=LDO49_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15460;old_locus_tag=BCEP4_2080028 NZ_CAJZAV010000122.1 Protein Homology CDS 30705 30929 . + 0 ID=cds-WP_021157619.1;Parent=gene-LDO49_RS15460;Dbxref=GenBank:WP_021157619.1;Name=WP_021157619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759437.1;locus_tag=LDO49_RS15460;product=hypothetical protein;protein_id=WP_021157619.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 30987 31415 . - . ID=gene-LDO49_RS15465;Name=LDO49_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15465;old_locus_tag=BCEP4_2080029 NZ_CAJZAV010000122.1 Protein Homology CDS 30987 31415 . - 0 ID=cds-WP_048025786.1;Parent=gene-LDO49_RS15465;Dbxref=GenBank:WP_048025786.1;Name=WP_048025786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694699.1;locus_tag=LDO49_RS15465;product=hypothetical protein;protein_id=WP_048025786.1;transl_table=11 NZ_CAJZAV010000122.1 RefSeq gene 31754 32139 . + . ID=gene-LDO49_RS15470;Name=LDO49_RS15470;end_range=32139,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15470;partial=true NZ_CAJZAV010000122.1 Protein Homology CDS 31754 32139 . + 0 ID=cds-WP_224051981.1;Parent=gene-LDO49_RS15470;Dbxref=GenBank:WP_224051981.1;Name=WP_224051981.1;Ontology_term=GO:0000160;end_range=32139,.;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365781.1;locus_tag=LDO49_RS15470;partial=true;product=response regulator;protein_id=WP_224051981.1;transl_table=11 ##sequence-region NZ_CAJZAV010000123.1 1 10677 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000123.1 RefSeq region 1 10677 . + . ID=NZ_CAJZAV010000123.1:1..10677;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_209 NZ_CAJZAV010000123.1 RefSeq gene 1 2166 . - . ID=gene-LDO49_RS15475;Name=LDO49_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15475;partial=true;start_range=.,1 NZ_CAJZAV010000123.1 Protein Homology CDS 1 2166 . - 0 ID=cds-WP_224051982.1;Parent=gene-LDO49_RS15475;Dbxref=GenBank:WP_224051982.1;Name=WP_224051982.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350301.1;locus_tag=LDO49_RS15475;partial=true;product=type VI secretion system Vgr family protein;protein_id=WP_224051982.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000123.1 RefSeq gene 2586 2846 . + . ID=gene-LDO49_RS15480;Name=LDO49_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15480;old_locus_tag=BCEP4_2090003 NZ_CAJZAV010000123.1 Protein Homology CDS 2586 2846 . + 0 ID=cds-WP_060147444.1;Parent=gene-LDO49_RS15480;Dbxref=GenBank:WP_060147444.1;Name=WP_060147444.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350302.1;locus_tag=LDO49_RS15480;product=PAAR domain-containing protein;protein_id=WP_060147444.1;transl_table=11 NZ_CAJZAV010000123.1 RefSeq gene 2912 4279 . + . ID=gene-LDO49_RS15485;Name=LDO49_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15485;old_locus_tag=BCEP4_2090004 NZ_CAJZAV010000123.1 Protein Homology CDS 2912 4279 . + 0 ID=cds-WP_060147443.1;Parent=gene-LDO49_RS15485;Dbxref=GenBank:WP_060147443.1;Name=WP_060147443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521774.1;locus_tag=LDO49_RS15485;product=hypothetical protein;protein_id=WP_060147443.1;transl_table=11 NZ_CAJZAV010000123.1 RefSeq gene 4334 6196 . - . ID=gene-LDO49_RS15490;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LDO49_RS15490;old_locus_tag=BCEP4_2090005 NZ_CAJZAV010000123.1 Protein Homology CDS 4334 6196 . - 0 ID=cds-WP_060147442.1;Parent=gene-LDO49_RS15490;Dbxref=GenBank:WP_060147442.1;Name=WP_060147442.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350304.1;locus_tag=LDO49_RS15490;product=type VI secretion system baseplate subunit TssF;protein_id=WP_060147442.1;transl_table=11 NZ_CAJZAV010000123.1 RefSeq gene 6565 6978 . - . ID=gene-LDO49_RS15495;Name=LDO49_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15495;old_locus_tag=BCEP4_2090006 NZ_CAJZAV010000123.1 Protein Homology CDS 6565 6978 . - 0 ID=cds-WP_021160104.1;Parent=gene-LDO49_RS15495;Dbxref=GenBank:WP_021160104.1;Name=WP_021160104.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760672.1;locus_tag=LDO49_RS15495;product=DoxX family protein;protein_id=WP_021160104.1;transl_table=11 NZ_CAJZAV010000123.1 RefSeq gene 7982 9484 . + . ID=gene-LDO49_RS15500;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=LDO49_RS15500;old_locus_tag=BCEP4_2090010 NZ_CAJZAV010000123.1 Protein Homology CDS 7982 9484 . + 0 ID=cds-WP_060147441.1;Parent=gene-LDO49_RS15500;Dbxref=GenBank:WP_060147441.1;Name=WP_060147441.1;Ontology_term=GO:0007155,GO:0009288;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485861.1;locus_tag=LDO49_RS15500;product=flagellar filament capping protein FliD;protein_id=WP_060147441.1;transl_table=11 NZ_CAJZAV010000123.1 RefSeq gene 9685 10332 . - . ID=gene-LDO49_RS15505;Name=LDO49_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15505;old_locus_tag=BCEP4_2090011 NZ_CAJZAV010000123.1 Protein Homology CDS 9685 10332 . - 0 ID=cds-WP_060147440.1;Parent=gene-LDO49_RS15505;Dbxref=GenBank:WP_060147440.1;Name=WP_060147440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481056.1;locus_tag=LDO49_RS15505;product=hypothetical protein;protein_id=WP_060147440.1;transl_table=11 ##sequence-region NZ_CAJZAV010000124.1 1 37249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000124.1 RefSeq region 1 37249 . + . ID=NZ_CAJZAV010000124.1:1..37249;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_21 NZ_CAJZAV010000124.1 RefSeq gene 1 758 . + . ID=gene-LDO49_RS15510;Name=LDO49_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15510;old_locus_tag=BCEP4_210001;partial=true;start_range=.,1 NZ_CAJZAV010000124.1 Protein Homology CDS 1 758 . + 2 ID=cds-WP_224051984.1;Parent=gene-LDO49_RS15510;Dbxref=GenBank:WP_224051984.1;Name=WP_224051984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758175.1;locus_tag=LDO49_RS15510;partial=true;product=LysR substrate-binding domain-containing protein;protein_id=WP_224051984.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 1257 1508 . - . ID=gene-LDO49_RS15515;Name=LDO49_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15515;old_locus_tag=BCEP4_210004 NZ_CAJZAV010000124.1 Protein Homology CDS 1257 1508 . - 0 ID=cds-WP_224051986.1;Parent=gene-LDO49_RS15515;Dbxref=GenBank:WP_224051986.1;Name=WP_224051986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354368.1;locus_tag=LDO49_RS15515;product=hypothetical protein;protein_id=WP_224051986.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 1603 3825 . - . ID=gene-LDO49_RS15520;Name=LDO49_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15520;old_locus_tag=BCEP4_210005 NZ_CAJZAV010000124.1 Protein Homology CDS 1603 3825 . - 0 ID=cds-WP_021158801.1;Parent=gene-LDO49_RS15520;Dbxref=GenBank:WP_021158801.1;Name=WP_021158801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898673.1;locus_tag=LDO49_RS15520;product=amylo-alpha-1%2C6-glucosidase;protein_id=WP_021158801.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 3981 12458 . - . ID=gene-LDO49_RS15525;Name=LDO49_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15525;old_locus_tag=BCEP4_210006 NZ_CAJZAV010000124.1 Protein Homology CDS 3981 12458 . - 0 ID=cds-WP_224051988.1;Parent=gene-LDO49_RS15525;Dbxref=GenBank:WP_224051988.1;Name=WP_224051988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482134.1;locus_tag=LDO49_RS15525;product=autotransporter-associated beta strand repeat-containing protein;protein_id=WP_224051988.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 12436 12717 . + . ID=gene-LDO49_RS15530;Name=LDO49_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15530 NZ_CAJZAV010000124.1 GeneMarkS-2+ CDS 12436 12717 . + 0 ID=cds-WP_224051989.1;Parent=gene-LDO49_RS15530;Dbxref=GenBank:WP_224051989.1;Name=WP_224051989.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS15530;product=hypothetical protein;protein_id=WP_224051989.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 13142 13831 . - . ID=gene-LDO49_RS15535;Name=LDO49_RS15535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15535;old_locus_tag=BCEP4_210007 NZ_CAJZAV010000124.1 Protein Homology CDS 13142 13831 . - 0 ID=cds-WP_059492091.1;Parent=gene-LDO49_RS15535;Dbxref=GenBank:WP_059492091.1;Name=WP_059492091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482132.1;locus_tag=LDO49_RS15535;product=YdcF family protein;protein_id=WP_059492091.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 14101 15135 . - . ID=gene-LDO49_RS15540;Name=LDO49_RS15540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15540;old_locus_tag=BCEP4_210008 NZ_CAJZAV010000124.1 Protein Homology CDS 14101 15135 . - 0 ID=cds-WP_027789592.1;Parent=gene-LDO49_RS15540;Dbxref=GenBank:WP_027789592.1;Name=WP_027789592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366613.1;locus_tag=LDO49_RS15540;product=rod shape-determining protein;protein_id=WP_027789592.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 15407 17800 . + . ID=gene-LDO49_RS15545;Name=LDO49_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15545;old_locus_tag=BCEP4_210009 NZ_CAJZAV010000124.1 Protein Homology CDS 15407 17800 . + 0 ID=cds-WP_059484033.1;Parent=gene-LDO49_RS15545;Dbxref=GenBank:WP_059484033.1;Name=WP_059484033.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480782.1;locus_tag=LDO49_RS15545;product=patatin-like phospholipase family protein;protein_id=WP_059484033.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 17858 18481 . - . ID=gene-LDO49_RS15550;Name=LDO49_RS15550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15550;old_locus_tag=BCEP4_210010 NZ_CAJZAV010000124.1 Protein Homology CDS 17858 18481 . - 0 ID=cds-WP_021162770.1;Parent=gene-LDO49_RS15550;Dbxref=GenBank:WP_021162770.1;Name=WP_021162770.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0016491,GO:0050136,GO:0050446;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498857.1;locus_tag=LDO49_RS15550;product=FMN-dependent NADH-azoreductase;protein_id=WP_021162770.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 18805 19935 . - . ID=gene-LDO49_RS15555;Name=LDO49_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15555;old_locus_tag=BCEP4_210011 NZ_CAJZAV010000124.1 Protein Homology CDS 18805 19935 . - 0 ID=cds-WP_059857817.1;Parent=gene-LDO49_RS15555;Dbxref=GenBank:WP_059857817.1;Name=WP_059857817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880672.1;locus_tag=LDO49_RS15555;product=ATP-binding protein;protein_id=WP_059857817.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 20000 20710 . - . ID=gene-LDO49_RS15560;Name=LDO49_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15560;old_locus_tag=BCEP4_210012 NZ_CAJZAV010000124.1 Protein Homology CDS 20000 20710 . - 0 ID=cds-WP_027789596.1;Parent=gene-LDO49_RS15560;Dbxref=GenBank:WP_027789596.1;Name=WP_027789596.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184573.1;locus_tag=LDO49_RS15560;product=response regulator;protein_id=WP_027789596.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 20929 21843 . + . ID=gene-LDO49_RS15565;Name=LDO49_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15565;old_locus_tag=BCEP4_210013 NZ_CAJZAV010000124.1 Protein Homology CDS 20929 21843 . + 0 ID=cds-WP_060070519.1;Parent=gene-LDO49_RS15565;Dbxref=GenBank:WP_060070519.1;Name=WP_060070519.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108377.1;locus_tag=LDO49_RS15565;product=glutaminase;protein_id=WP_060070519.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 22184 22450 . - . ID=gene-LDO49_RS15570;Name=LDO49_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15570;old_locus_tag=BCEP4_210016 NZ_CAJZAV010000124.1 GeneMarkS-2+ CDS 22184 22450 . - 0 ID=cds-WP_021162772.1;Parent=gene-LDO49_RS15570;Dbxref=GenBank:WP_021162772.1;Name=WP_021162772.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS15570;product=hypothetical protein;protein_id=WP_021162772.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 23629 23994 . - . ID=gene-LDO49_RS15575;Name=LDO49_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15575;old_locus_tag=BCEP4_210017 NZ_CAJZAV010000124.1 Protein Homology CDS 23629 23994 . - 0 ID=cds-WP_059588780.1;Parent=gene-LDO49_RS15575;Dbxref=GenBank:WP_059588780.1;Name=WP_059588780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006388152.1;locus_tag=LDO49_RS15575;product=VOC family protein;protein_id=WP_059588780.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 24144 24548 . - . ID=gene-LDO49_RS15580;Name=LDO49_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15580;old_locus_tag=BCEP4_210019 NZ_CAJZAV010000124.1 Protein Homology CDS 24144 24548 . - 0 ID=cds-WP_059484037.1;Parent=gene-LDO49_RS15580;Dbxref=GenBank:WP_059484037.1;Name=WP_059484037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020066447.1;locus_tag=LDO49_RS15580;product=hypothetical protein;protein_id=WP_059484037.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 24862 25500 . + . ID=gene-LDO49_RS15585;Name=LDO49_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15585;old_locus_tag=BCEP4_210020 NZ_CAJZAV010000124.1 Protein Homology CDS 24862 25500 . + 0 ID=cds-WP_060070522.1;Parent=gene-LDO49_RS15585;Dbxref=GenBank:WP_060070522.1;Name=WP_060070522.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406129.1;locus_tag=LDO49_RS15585;product=isochorismatase family cysteine hydrolase;protein_id=WP_060070522.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 25660 26391 . - . ID=gene-LDO49_RS15590;Name=LDO49_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15590;old_locus_tag=BCEP4_210021 NZ_CAJZAV010000124.1 Protein Homology CDS 25660 26391 . - 0 ID=cds-WP_006498851.1;Parent=gene-LDO49_RS15590;Dbxref=GenBank:WP_006498851.1;Name=WP_006498851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009971536.1;locus_tag=LDO49_RS15590;product=ribonuclease T2;protein_id=WP_006498851.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 26622 27011 . + . ID=gene-LDO49_RS15595;Name=LDO49_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15595;old_locus_tag=BCEP4_210022 NZ_CAJZAV010000124.1 Protein Homology CDS 26622 27011 . + 0 ID=cds-WP_060070525.1;Parent=gene-LDO49_RS15595;Dbxref=GenBank:WP_060070525.1;Name=WP_060070525.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013395325.1;locus_tag=LDO49_RS15595;product=OsmC family protein;protein_id=WP_060070525.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 27093 27671 . - . ID=gene-LDO49_RS15600;Name=LDO49_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15600;old_locus_tag=BCEP4_210023 NZ_CAJZAV010000124.1 Protein Homology CDS 27093 27671 . - 0 ID=cds-WP_021162777.1;Parent=gene-LDO49_RS15600;Dbxref=GenBank:WP_021162777.1;Name=WP_021162777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354340.1;locus_tag=LDO49_RS15600;product=hypothetical protein;protein_id=WP_021162777.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 27768 29171 . - . ID=gene-LDO49_RS15605;Name=LDO49_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15605;old_locus_tag=BCEP4_210024 NZ_CAJZAV010000124.1 Protein Homology CDS 27768 29171 . - 0 ID=cds-WP_059484040.1;Parent=gene-LDO49_RS15605;Dbxref=GenBank:WP_059484040.1;Name=WP_059484040.1;Ontology_term=GO:0009268;gbkey=CDS;go_process=response to pH|0009268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339629.1;locus_tag=LDO49_RS15605;product=HdeD family acid-resistance protein;protein_id=WP_059484040.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 29532 30209 . + . ID=gene-LDO49_RS15610;Name=LDO49_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15610;old_locus_tag=BCEP4_210025 NZ_CAJZAV010000124.1 GeneMarkS-2+ CDS 29532 30209 . + 0 ID=cds-WP_224051990.1;Parent=gene-LDO49_RS15610;Dbxref=GenBank:WP_224051990.1;Name=WP_224051990.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS15610;product=hypothetical protein;protein_id=WP_224051990.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 30264 30821 . + . ID=gene-LDO49_RS15615;Name=LDO49_RS15615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15615;old_locus_tag=BCEP4_210026 NZ_CAJZAV010000124.1 Protein Homology CDS 30264 30821 . + 0 ID=cds-WP_059709465.1;Parent=gene-LDO49_RS15615;Dbxref=GenBank:WP_059709465.1;Name=WP_059709465.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216545.1;locus_tag=LDO49_RS15615;product=helix-turn-helix domain-containing protein;protein_id=WP_059709465.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 30903 31484 . + . ID=gene-LDO49_RS15620;Name=LDO49_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15620;old_locus_tag=BCEP4_210027 NZ_CAJZAV010000124.1 Protein Homology CDS 30903 31484 . + 0 ID=cds-WP_060070528.1;Parent=gene-LDO49_RS15620;Dbxref=GenBank:WP_060070528.1;Name=WP_060070528.1;Ontology_term=GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483155.1;locus_tag=LDO49_RS15620;product=HD domain-containing protein;protein_id=WP_060070528.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 31540 32268 . + . ID=gene-LDO49_RS15625;Name=LDO49_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15625;old_locus_tag=BCEP4_210028 NZ_CAJZAV010000124.1 Protein Homology CDS 31540 32268 . + 0 ID=cds-WP_059812766.1;Parent=gene-LDO49_RS15625;Dbxref=GenBank:WP_059812766.1;Name=WP_059812766.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522281.1;locus_tag=LDO49_RS15625;product=class I SAM-dependent methyltransferase;protein_id=WP_059812766.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 32556 33749 . + . ID=gene-LDO49_RS15630;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=LDO49_RS15630;old_locus_tag=BCEP4_210029 NZ_CAJZAV010000124.1 Protein Homology CDS 32556 33749 . + 0 ID=cds-WP_059485166.1;Parent=gene-LDO49_RS15630;Dbxref=GenBank:WP_059485166.1;Name=WP_059485166.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483156.1;locus_tag=LDO49_RS15630;product=macrolide transporter subunit MacA;protein_id=WP_059485166.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 33752 35812 . + . ID=gene-LDO49_RS15635;Name=LDO49_RS15635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15635;old_locus_tag=BCEP4_210030 NZ_CAJZAV010000124.1 Protein Homology CDS 33752 35812 . + 0 ID=cds-WP_060070531.1;Parent=gene-LDO49_RS15635;Dbxref=GenBank:WP_060070531.1;Name=WP_060070531.1;Ontology_term=GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538968.1;locus_tag=LDO49_RS15635;product=MacB family efflux pump subunit;protein_id=WP_060070531.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq gene 35826 37001 . + . ID=gene-LDO49_RS15640;Name=LDO49_RS15640;end_range=37001,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15640;old_locus_tag=BCEP4_210031;partial=true NZ_CAJZAV010000124.1 Protein Homology CDS 35826 37001 . + 0 ID=cds-WP_443797959.1;Parent=gene-LDO49_RS15640;Dbxref=GenBank:WP_443797959.1;Name=WP_443797959.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;end_range=37001,.;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898643.1;locus_tag=LDO49_RS15640;partial=true;product=efflux transporter outer membrane subunit;protein_id=WP_443797959.1;transl_table=11 NZ_CAJZAV010000124.1 RefSeq pseudogene 37012 37174 . + . ID=gene-LDO49_RS38070;Name=LDO49_RS38070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38070;old_locus_tag=BCEP4_210032;partial=true;pseudo=true;start_range=.,37012 NZ_CAJZAV010000124.1 Protein Homology CDS 37012 37174 . + 1 ID=cds-LDO49_RS38070;Parent=gene-LDO49_RS38070;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480769.1;locus_tag=LDO49_RS38070;partial=true;product=efflux transporter outer membrane subunit;pseudo=true;start_range=.,37012;transl_table=11 ##sequence-region NZ_CAJZAV010000125.1 1 4818 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000125.1 RefSeq region 1 4818 . + . ID=NZ_CAJZAV010000125.1:1..4818;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_210 NZ_CAJZAV010000125.1 RefSeq gene 1 1229 . - . ID=gene-LDO49_RS15645;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=LDO49_RS15645;partial=true;start_range=.,1 NZ_CAJZAV010000125.1 Protein Homology CDS 1 1229 . - 0 ID=cds-WP_224051991.1;Parent=gene-LDO49_RS15645;Dbxref=GenBank:WP_224051991.1;Name=WP_224051991.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523038.1;locus_tag=LDO49_RS15645;partial=true;product=flagellar hook-associated protein FlgL;protein_id=WP_224051991.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000125.1 RefSeq gene 1247 3178 . - . ID=gene-LDO49_RS15650;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=LDO49_RS15650;old_locus_tag=BCEP4_2100002 NZ_CAJZAV010000125.1 Protein Homology CDS 1247 3178 . - 0 ID=cds-WP_059483901.1;Parent=gene-LDO49_RS15650;Dbxref=GenBank:WP_059483901.1;Name=WP_059483901.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493512.1;locus_tag=LDO49_RS15650;product=flagellar hook-associated protein FlgK;protein_id=WP_059483901.1;transl_table=11 NZ_CAJZAV010000125.1 RefSeq gene 3384 4139 . - . ID=gene-LDO49_RS15655;Name=LDO49_RS15655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15655;old_locus_tag=BCEP4_2100003 NZ_CAJZAV010000125.1 Protein Homology CDS 3384 4139 . - 0 ID=cds-WP_021164374.1;Parent=gene-LDO49_RS15655;Dbxref=GenBank:WP_021164374.1;Name=WP_021164374.1;Ontology_term=GO:0035438;gbkey=CDS;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024243.1;locus_tag=LDO49_RS15655;product=flagellar brake protein;protein_id=WP_021164374.1;transl_table=11 NZ_CAJZAV010000125.1 RefSeq gene 4357 4818 . - . ID=gene-LDO49_RS15660;Name=flgJ;end_range=4818,.;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=LDO49_RS15660;old_locus_tag=BCEP4_2100004;partial=true NZ_CAJZAV010000125.1 Protein Homology CDS 4357 4818 . - 0 ID=cds-WP_224051992.1;Parent=gene-LDO49_RS15660;Dbxref=GenBank:WP_224051992.1;Name=WP_224051992.1;Ontology_term=GO:0044780,GO:0016798;end_range=4818,.;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364900.1;locus_tag=LDO49_RS15660;partial=true;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_224051992.1;transl_table=11 ##sequence-region NZ_CAJZAV010000126.1 1 5714 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000126.1 RefSeq region 1 5714 . + . ID=NZ_CAJZAV010000126.1:1..5714;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_211 NZ_CAJZAV010000126.1 RefSeq pseudogene 1 228 . + . ID=gene-LDO49_RS38075;Name=LDO49_RS38075;end_range=228,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38075;old_locus_tag=BCEP4_2110001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000126.1 Protein Homology CDS 1 228 . + 1 ID=cds-LDO49_RS38075;Parent=gene-LDO49_RS38075;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=228,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544347.1;locus_tag=LDO49_RS38075;partial=true;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000126.1 RefSeq gene 239 1160 . + . ID=gene-LDO49_RS15665;Name=LDO49_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15665;old_locus_tag=BCEP4_2110003;partial=true;start_range=.,239 NZ_CAJZAV010000126.1 Protein Homology CDS 239 1160 . + 1 ID=cds-WP_443797960.1;Parent=gene-LDO49_RS15665;Dbxref=GenBank:WP_443797960.1;Name=WP_443797960.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544347.1;locus_tag=LDO49_RS15665;partial=true;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_443797960.1;start_range=.,239;transl_table=11 NZ_CAJZAV010000126.1 RefSeq gene 1157 1957 . + . ID=gene-LDO49_RS15670;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=LDO49_RS15670;old_locus_tag=BCEP4_2110002 NZ_CAJZAV010000126.1 Protein Homology CDS 1157 1957 . + 0 ID=cds-WP_048020607.1;Parent=gene-LDO49_RS15670;Dbxref=GenBank:WP_048020607.1;Name=WP_048020607.1;Ontology_term=GO:0033214,GO:0008199,GO:0016491,GO:0051537;gbkey=CDS;gene=fhuF;go_function=ferric iron binding|0008199||IEA,oxidoreductase activity|0016491||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=siderophore-iron import into cell|0033214||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488656.1;locus_tag=LDO49_RS15670;product=siderophore-iron reductase FhuF;protein_id=WP_048020607.1;transl_table=11 NZ_CAJZAV010000126.1 RefSeq gene 1954 3009 . + . ID=gene-LDO49_RS15675;Name=LDO49_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15675;old_locus_tag=BCEP4_2110004 NZ_CAJZAV010000126.1 Protein Homology CDS 1954 3009 . + 0 ID=cds-WP_059653281.1;Parent=gene-LDO49_RS15675;Dbxref=GenBank:WP_059653281.1;Name=WP_059653281.1;Ontology_term=GO:0022857,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328455.1;locus_tag=LDO49_RS15675;product=ABC transporter substrate-binding protein;protein_id=WP_059653281.1;transl_table=11 NZ_CAJZAV010000126.1 RefSeq gene 3187 4932 . - . ID=gene-LDO49_RS15680;Name=LDO49_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15680;old_locus_tag=BCEP4_2110005 NZ_CAJZAV010000126.1 Protein Homology CDS 3187 4932 . - 0 ID=cds-WP_224051993.1;Parent=gene-LDO49_RS15680;Dbxref=GenBank:WP_224051993.1;Name=WP_224051993.1;Ontology_term=GO:0015833,GO:0005524,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351939.1;locus_tag=LDO49_RS15680;product=cyclic peptide export ABC transporter;protein_id=WP_224051993.1;transl_table=11 NZ_CAJZAV010000126.1 RefSeq gene 5205 5378 . + . ID=gene-LDO49_RS38080;Name=LDO49_RS38080;end_range=5378,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38080;old_locus_tag=BCEP4_2110007;partial=true NZ_CAJZAV010000126.1 Protein Homology CDS 5205 5378 . + 0 ID=cds-WP_443797962.1;Parent=gene-LDO49_RS38080;Dbxref=GenBank:WP_443797962.1;Name=WP_443797962.1;end_range=5378,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400101.1;locus_tag=LDO49_RS38080;partial=true;product=hypothetical protein;protein_id=WP_443797962.1;transl_table=11 NZ_CAJZAV010000126.1 RefSeq gene 5389 5714 . + . ID=gene-LDO49_RS38085;Name=LDO49_RS38085;end_range=5714,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38085;partial=true;start_range=.,5389 NZ_CAJZAV010000126.1 Protein Homology CDS 5389 5714 . + 2 ID=cds-WP_443797961.1;Parent=gene-LDO49_RS38085;Dbxref=GenBank:WP_443797961.1;Name=WP_443797961.1;end_range=5714,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400101.1;locus_tag=LDO49_RS38085;partial=true;product=AMP-binding protein;protein_id=WP_443797961.1;start_range=.,5389;transl_table=11 ##sequence-region NZ_CAJZAV010000127.1 1 453 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000127.1 RefSeq region 1 453 . + . ID=NZ_CAJZAV010000127.1:1..453;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_212 NZ_CAJZAV010000127.1 RefSeq gene 1 304 . + . ID=gene-LDO49_RS15690;Name=LDO49_RS15690;end_range=304,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15690;old_locus_tag=BCEP4_2120001;partial=true;start_range=.,1 NZ_CAJZAV010000127.1 Protein Homology CDS 1 304 . + 1 ID=cds-WP_443797963.1;Parent=gene-LDO49_RS15690;Dbxref=GenBank:WP_443797963.1;Name=WP_443797963.1;end_range=304,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217789.1;locus_tag=LDO49_RS15690;partial=true;product=hypothetical protein;protein_id=WP_443797963.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAV010000128.1 1 1610 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000128.1 RefSeq region 1 1610 . + . ID=NZ_CAJZAV010000128.1:1..1610;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_213 NZ_CAJZAV010000128.1 RefSeq gene 29 1567 . - . ID=gene-LDO49_RS15695;Name=LDO49_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15695;old_locus_tag=BCEP4_2130001 NZ_CAJZAV010000128.1 Protein Homology CDS 29 1567 . - 0 ID=cds-WP_060148186.1;Parent=gene-LDO49_RS15695;Dbxref=GenBank:WP_060148186.1;Name=WP_060148186.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690338.1;locus_tag=LDO49_RS15695;product=IS3 family transposase;protein_id=WP_060148186.1;transl_table=11 ##sequence-region NZ_CAJZAV010000129.1 1 6403 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000129.1 RefSeq region 1 6403 . + . ID=NZ_CAJZAV010000129.1:1..6403;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_214 NZ_CAJZAV010000129.1 RefSeq gene 1 526 . + . ID=gene-LDO49_RS15700;Name=LDO49_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15700;old_locus_tag=BCEP4_2140001;partial=true;start_range=.,1 NZ_CAJZAV010000129.1 Protein Homology CDS 1 526 . + 1 ID=cds-WP_224051994.1;Parent=gene-LDO49_RS15700;Dbxref=GenBank:WP_224051994.1;Name=WP_224051994.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495910.1;locus_tag=LDO49_RS15700;partial=true;product=ABC transporter permease;protein_id=WP_224051994.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000129.1 RefSeq gene 561 1406 . + . ID=gene-LDO49_RS15705;Name=LDO49_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15705;old_locus_tag=BCEP4_2140002 NZ_CAJZAV010000129.1 Protein Homology CDS 561 1406 . + 0 ID=cds-WP_021162897.1;Parent=gene-LDO49_RS15705;Dbxref=GenBank:WP_021162897.1;Name=WP_021162897.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899772.1;locus_tag=LDO49_RS15705;product=ABC transporter ATP-binding protein;protein_id=WP_021162897.1;transl_table=11 NZ_CAJZAV010000129.1 RefSeq gene 1555 2508 . + . ID=gene-LDO49_RS15710;Name=LDO49_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15710;old_locus_tag=BCEP4_2140003 NZ_CAJZAV010000129.1 Protein Homology CDS 1555 2508 . + 0 ID=cds-WP_060072334.1;Parent=gene-LDO49_RS15710;Dbxref=GenBank:WP_060072334.1;Name=WP_060072334.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694695.1;locus_tag=LDO49_RS15710;product=TauD/TfdA dioxygenase family protein;protein_id=WP_060072334.1;transl_table=11 NZ_CAJZAV010000129.1 RefSeq gene 2665 3612 . + . ID=gene-LDO49_RS15715;Name=LDO49_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15715;old_locus_tag=BCEP4_2140004 NZ_CAJZAV010000129.1 Protein Homology CDS 2665 3612 . + 0 ID=cds-WP_021162895.1;Parent=gene-LDO49_RS15715;Dbxref=GenBank:WP_021162895.1;Name=WP_021162895.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399712.1;locus_tag=LDO49_RS15715;product=TauD/TfdA dioxygenase family protein;protein_id=WP_021162895.1;transl_table=11 NZ_CAJZAV010000129.1 RefSeq gene 3721 5382 . - . ID=gene-LDO49_RS15720;Name=LDO49_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15720;old_locus_tag=BCEP4_2140005 NZ_CAJZAV010000129.1 Protein Homology CDS 3721 5382 . - 0 ID=cds-WP_060072336.1;Parent=gene-LDO49_RS15720;Dbxref=GenBank:WP_060072336.1;Name=WP_060072336.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486177.1;locus_tag=LDO49_RS15720;product=ABC transporter substrate-binding protein;protein_id=WP_060072336.1;transl_table=11 NZ_CAJZAV010000129.1 RefSeq gene 5576 5872 . + . ID=gene-LDO49_RS15725;Name=LDO49_RS15725;end_range=5872,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15725;partial=true NZ_CAJZAV010000129.1 Protein Homology CDS 5576 5872 . + 0 ID=cds-WP_372585849.1;Parent=gene-LDO49_RS15725;Dbxref=GenBank:WP_372585849.1;Name=WP_372585849.1;end_range=5872,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007586033.1;locus_tag=LDO49_RS15725;partial=true;product=DUF427 domain-containing protein;protein_id=WP_372585849.1;transl_table=11 NZ_CAJZAV010000129.1 RefSeq gene 5883 6144 . - . ID=gene-LDO49_RS38090;Name=LDO49_RS38090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38090;partial=true;start_range=.,5883 NZ_CAJZAV010000129.1 GeneMarkS-2+ CDS 5883 6144 . - 0 ID=cds-WP_443797964.1;Parent=gene-LDO49_RS38090;Dbxref=GenBank:WP_443797964.1;Name=WP_443797964.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS38090;partial=true;product=hypothetical protein;protein_id=WP_443797964.1;start_range=.,5883;transl_table=11 ##sequence-region NZ_CAJZAV010000130.1 1 7038 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000130.1 RefSeq region 1 7038 . + . ID=NZ_CAJZAV010000130.1:1..7038;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_215 NZ_CAJZAV010000130.1 RefSeq gene 1 463 . - . ID=gene-LDO49_RS15730;Name=LDO49_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15730;partial=true;start_range=.,1 NZ_CAJZAV010000130.1 Protein Homology CDS 1 463 . - 0 ID=cds-WP_253074678.1;Parent=gene-LDO49_RS15730;Dbxref=GenBank:WP_253074678.1;Name=WP_253074678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496735.1;locus_tag=LDO49_RS15730;partial=true;product=AIR synthase related protein;protein_id=WP_253074678.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000130.1 RefSeq gene 598 2940 . + . ID=gene-LDO49_RS15735;Name=LDO49_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15735;old_locus_tag=BCEP4_2150002 NZ_CAJZAV010000130.1 Protein Homology CDS 598 2940 . + 0 ID=cds-WP_269150515.1;Parent=gene-LDO49_RS15735;Dbxref=GenBank:WP_269150515.1;Name=WP_269150515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760308.1;locus_tag=LDO49_RS15735;product=NADP-dependent malic enzyme;protein_id=WP_269150515.1;transl_table=11 NZ_CAJZAV010000130.1 RefSeq gene 3317 3748 . + . ID=gene-LDO49_RS15740;Name=LDO49_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15740;old_locus_tag=BCEP4_2150003 NZ_CAJZAV010000130.1 Protein Homology CDS 3317 3748 . + 0 ID=cds-WP_021159265.1;Parent=gene-LDO49_RS15740;Dbxref=GenBank:WP_021159265.1;Name=WP_021159265.1;Ontology_term=GO:0003723,GO:0004521;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194152.1;locus_tag=LDO49_RS15740;product=ribonuclease domain-containing protein;protein_id=WP_021159265.1;transl_table=11 NZ_CAJZAV010000130.1 RefSeq gene 3765 4328 . + . ID=gene-LDO49_RS15745;Name=LDO49_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15745;old_locus_tag=BCEP4_2150004 NZ_CAJZAV010000130.1 Protein Homology CDS 3765 4328 . + 0 ID=cds-WP_021159266.1;Parent=gene-LDO49_RS15745;Dbxref=GenBank:WP_021159266.1;Name=WP_021159266.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350906.1;locus_tag=LDO49_RS15745;product=barstar family protein;protein_id=WP_021159266.1;transl_table=11 NZ_CAJZAV010000130.1 RefSeq gene 4581 5270 . + . ID=gene-LDO49_RS15750;Name=LDO49_RS15750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15750;old_locus_tag=BCEP4_2150005 NZ_CAJZAV010000130.1 GeneMarkS-2+ CDS 4581 5270 . + 0 ID=cds-WP_124475549.1;Parent=gene-LDO49_RS15750;Dbxref=GenBank:WP_124475549.1;Name=WP_124475549.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS15750;product=hypothetical protein;protein_id=WP_124475549.1;transl_table=11 NZ_CAJZAV010000130.1 RefSeq gene 5318 6061 . + . ID=gene-LDO49_RS15755;Name=LDO49_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15755;old_locus_tag=BCEP4_2150006 NZ_CAJZAV010000130.1 Protein Homology CDS 5318 6061 . + 0 ID=cds-WP_060072237.1;Parent=gene-LDO49_RS15755;Dbxref=GenBank:WP_060072237.1;Name=WP_060072237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350908.1;locus_tag=LDO49_RS15755;product=hypothetical protein;protein_id=WP_060072237.1;transl_table=11 NZ_CAJZAV010000130.1 RefSeq gene 6124 6954 . + . ID=gene-LDO49_RS15760;Name=LDO49_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15760;old_locus_tag=BCEP4_2150007 NZ_CAJZAV010000130.1 Protein Homology CDS 6124 6954 . + 0 ID=cds-WP_059623942.1;Parent=gene-LDO49_RS15760;Dbxref=GenBank:WP_059623942.1;Name=WP_059623942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350909.1;locus_tag=LDO49_RS15760;product=hypothetical protein;protein_id=WP_059623942.1;transl_table=11 ##sequence-region NZ_CAJZAV010000131.1 1 16647 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000131.1 RefSeq region 1 16647 . + . ID=NZ_CAJZAV010000131.1:1..16647;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_216 NZ_CAJZAV010000131.1 RefSeq gene 1 1701 . + . ID=gene-LDO49_RS15765;Name=LDO49_RS15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15765;old_locus_tag=BCEP4_2160001;partial=true;start_range=.,1 NZ_CAJZAV010000131.1 Protein Homology CDS 1 1701 . + 0 ID=cds-WP_224051996.1;Parent=gene-LDO49_RS15765;Dbxref=GenBank:WP_224051996.1;Name=WP_224051996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497027.1;locus_tag=LDO49_RS15765;partial=true;product=DUF4118 domain-containing protein;protein_id=WP_224051996.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000131.1 RefSeq gene 1694 2392 . + . ID=gene-LDO49_RS15770;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=LDO49_RS15770;old_locus_tag=BCEP4_2160002 NZ_CAJZAV010000131.1 Protein Homology CDS 1694 2392 . + 0 ID=cds-WP_027786844.1;Parent=gene-LDO49_RS15770;Dbxref=GenBank:WP_027786844.1;Name=WP_027786844.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752204.1;locus_tag=LDO49_RS15770;product=two-component system response regulator KdpE;protein_id=WP_027786844.1;transl_table=11 NZ_CAJZAV010000131.1 RefSeq gene 2551 2835 . + . ID=gene-LDO49_RS15775;Name=LDO49_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15775;old_locus_tag=BCEP4_2160003 NZ_CAJZAV010000131.1 Protein Homology CDS 2551 2835 . + 0 ID=cds-WP_060072163.1;Parent=gene-LDO49_RS15775;Dbxref=GenBank:WP_060072163.1;Name=WP_060072163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483516.1;locus_tag=LDO49_RS15775;product=putative hemolysin;protein_id=WP_060072163.1;transl_table=11 NZ_CAJZAV010000131.1 RefSeq gene 2973 3293 . + . ID=gene-LDO49_RS15780;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=LDO49_RS15780;old_locus_tag=BCEP4_2160004 NZ_CAJZAV010000131.1 Protein Homology CDS 2973 3293 . + 0 ID=cds-WP_021161112.1;Parent=gene-LDO49_RS15780;Dbxref=GenBank:WP_021161112.1;Name=WP_021161112.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896472.1;locus_tag=LDO49_RS15780;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_021161112.1;transl_table=11 NZ_CAJZAV010000131.1 RefSeq gene 3505 4122 . + . ID=gene-LDO49_RS15785;Name=LDO49_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15785;old_locus_tag=BCEP4_2160006 NZ_CAJZAV010000131.1 Protein Homology CDS 3505 4122 . + 0 ID=cds-WP_021161113.1;Parent=gene-LDO49_RS15785;Dbxref=GenBank:WP_021161113.1;Name=WP_021161113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009980272.1;locus_tag=LDO49_RS15785;product=DUF4126 domain-containing protein;protein_id=WP_021161113.1;transl_table=11 NZ_CAJZAV010000131.1 RefSeq gene 4173 6734 . + . ID=gene-LDO49_RS15790;Name=LDO49_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15790;old_locus_tag=BCEP4_2160005 NZ_CAJZAV010000131.1 Protein Homology CDS 4173 6734 . + 0 ID=cds-WP_060072165.1;Parent=gene-LDO49_RS15790;Dbxref=GenBank:WP_060072165.1;Name=WP_060072165.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013955990.1;locus_tag=LDO49_RS15790;product=ABC transporter permease;protein_id=WP_060072165.1;transl_table=11 NZ_CAJZAV010000131.1 RefSeq gene 6778 7188 . + . ID=gene-LDO49_RS15795;Name=LDO49_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15795;old_locus_tag=BCEP4_2160007 NZ_CAJZAV010000131.1 Protein Homology CDS 6778 7188 . + 0 ID=cds-WP_006398765.1;Parent=gene-LDO49_RS15795;Dbxref=GenBank:WP_006398765.1;Name=WP_006398765.1;Ontology_term=GO:0005344,GO:0019825,GO:0020037,GO:0046872;gbkey=CDS;go_function=oxygen carrier activity|0005344||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331548.1;locus_tag=LDO49_RS15795;product=group II truncated hemoglobin;protein_id=WP_006398765.1;transl_table=11 NZ_CAJZAV010000131.1 RefSeq gene 7293 8024 . + . ID=gene-LDO49_RS15800;Name=LDO49_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15800;old_locus_tag=BCEP4_2160008 NZ_CAJZAV010000131.1 Protein Homology CDS 7293 8024 . + 0 ID=cds-WP_048020474.1;Parent=gene-LDO49_RS15800;Dbxref=GenBank:WP_048020474.1;Name=WP_048020474.1;Ontology_term=GO:0006419,GO:0002161,GO:0002196,GO:0003676,GO:0004813,GO:0005524,GO:0046872;gbkey=CDS;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA,Ser-tRNA(Ala) deacylase activity|0002196||IEA,nucleic acid binding|0003676||IEA,alanine-tRNA ligase activity|0004813||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526445.1;locus_tag=LDO49_RS15800;product=alanyl-tRNA editing protein;protein_id=WP_048020474.1;transl_table=11 NZ_CAJZAV010000131.1 RefSeq gene 8021 8638 . + . ID=gene-LDO49_RS15805;Name=LDO49_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15805;old_locus_tag=BCEP4_2160009 NZ_CAJZAV010000131.1 Protein Homology CDS 8021 8638 . + 0 ID=cds-WP_224051998.1;Parent=gene-LDO49_RS15805;Dbxref=GenBank:WP_224051998.1;Name=WP_224051998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488213.1;locus_tag=LDO49_RS15805;product=DUF924 family protein;protein_id=WP_224051998.1;transl_table=11 NZ_CAJZAV010000131.1 RefSeq gene 8824 10716 . - . ID=gene-LDO49_RS15810;Name=LDO49_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15810;old_locus_tag=BCEP4_2160010 NZ_CAJZAV010000131.1 Protein Homology CDS 8824 10716 . - 0 ID=cds-WP_060072167.1;Parent=gene-LDO49_RS15810;Dbxref=GenBank:WP_060072167.1;Name=WP_060072167.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492738.1;locus_tag=LDO49_RS15810;product=ArnT family glycosyltransferase;protein_id=WP_060072167.1;transl_table=11 NZ_CAJZAV010000131.1 RefSeq gene 10946 11707 . - . ID=gene-LDO49_RS15815;Name=LDO49_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15815;old_locus_tag=BCEP4_2160011 NZ_CAJZAV010000131.1 Protein Homology CDS 10946 11707 . - 0 ID=cds-WP_059590673.1;Parent=gene-LDO49_RS15815;Dbxref=GenBank:WP_059590673.1;Name=WP_059590673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600657.1;locus_tag=LDO49_RS15815;product=SDR family oxidoreductase;protein_id=WP_059590673.1;transl_table=11 NZ_CAJZAV010000131.1 RefSeq gene 11730 12311 . - . ID=gene-LDO49_RS15820;Name=LDO49_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15820;old_locus_tag=BCEP4_2160012 NZ_CAJZAV010000131.1 Protein Homology CDS 11730 12311 . - 0 ID=cds-WP_060072169.1;Parent=gene-LDO49_RS15820;Dbxref=GenBank:WP_060072169.1;Name=WP_060072169.1;Ontology_term=GO:0009691,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885556.1;locus_tag=LDO49_RS15820;product=TIGR00730 family Rossman fold protein;protein_id=WP_060072169.1;transl_table=11 NZ_CAJZAV010000131.1 RefSeq gene 12308 13066 . - . ID=gene-LDO49_RS15825;Name=LDO49_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15825;old_locus_tag=BCEP4_2160013 NZ_CAJZAV010000131.1 Protein Homology CDS 12308 13066 . - 0 ID=cds-WP_021161119.1;Parent=gene-LDO49_RS15825;Dbxref=GenBank:WP_021161119.1;Name=WP_021161119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212998.1;locus_tag=LDO49_RS15825;product=TetR/AcrR family transcriptional regulator;protein_id=WP_021161119.1;transl_table=11 NZ_CAJZAV010000131.1 RefSeq gene 13273 13809 . - . ID=gene-LDO49_RS15830;Name=LDO49_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15830;old_locus_tag=BCEP4_2160014 NZ_CAJZAV010000131.1 Protein Homology CDS 13273 13809 . - 0 ID=cds-WP_048020482.1;Parent=gene-LDO49_RS15830;Dbxref=GenBank:WP_048020482.1;Name=WP_048020482.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411034.1;locus_tag=LDO49_RS15830;product=diacylglycerol kinase;protein_id=WP_048020482.1;transl_table=11 NZ_CAJZAV010000131.1 RefSeq gene 13806 14840 . - . ID=gene-LDO49_RS15835;Name=LDO49_RS15835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15835;old_locus_tag=BCEP4_2160015 NZ_CAJZAV010000131.1 Protein Homology CDS 13806 14840 . - 0 ID=cds-WP_027786855.1;Parent=gene-LDO49_RS15835;Dbxref=GenBank:WP_027786855.1;Name=WP_027786855.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328913.1;locus_tag=LDO49_RS15835;product=glycosyltransferase family 4 protein;protein_id=WP_027786855.1;transl_table=11 NZ_CAJZAV010000131.1 RefSeq gene 14870 15808 . - . ID=gene-LDO49_RS15840;Name=LDO49_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15840;old_locus_tag=BCEP4_2160016 NZ_CAJZAV010000131.1 Protein Homology CDS 14870 15808 . - 0 ID=cds-WP_021161120.1;Parent=gene-LDO49_RS15840;Dbxref=GenBank:WP_021161120.1;Name=WP_021161120.1;Ontology_term=GO:0009245,GO:0008758,GO:0046872;gbkey=CDS;go_function=UDP-2%2C3-diacylglucosamine hydrolase activity|0008758||IEA,metal ion binding|0046872||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196438.1;locus_tag=LDO49_RS15840;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_021161120.1;transl_table=11 NZ_CAJZAV010000131.1 RefSeq gene 16059 16565 . - . ID=gene-LDO49_RS15845;Name=LDO49_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15845;old_locus_tag=BCEP4_2160017 NZ_CAJZAV010000131.1 Protein Homology CDS 16059 16565 . - 0 ID=cds-WP_048020484.1;Parent=gene-LDO49_RS15845;Dbxref=GenBank:WP_048020484.1;Name=WP_048020484.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488204.1;locus_tag=LDO49_RS15845;product=RDD family protein;protein_id=WP_048020484.1;transl_table=11 ##sequence-region NZ_CAJZAV010000132.1 1 12704 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000132.1 RefSeq region 1 12704 . + . ID=NZ_CAJZAV010000132.1:1..12704;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_217 NZ_CAJZAV010000132.1 RefSeq pseudogene 1 230 . - . ID=gene-LDO49_RS15850;Name=LDO49_RS15850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS15850;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000132.1 Protein Homology CDS 1 230 . - 0 ID=cds-LDO49_RS15850;Parent=gene-LDO49_RS15850;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328453.1;locus_tag=LDO49_RS15850;partial=true;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000132.1 RefSeq gene 227 1075 . - . ID=gene-LDO49_RS15855;Name=LDO49_RS15855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15855;old_locus_tag=BCEP4_2170002 NZ_CAJZAV010000132.1 Protein Homology CDS 227 1075 . - 0 ID=cds-WP_224051999.1;Parent=gene-LDO49_RS15855;Dbxref=GenBank:WP_224051999.1;Name=WP_224051999.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486076.1;locus_tag=LDO49_RS15855;product=ABC transporter ATP-binding protein;protein_id=WP_224051999.1;transl_table=11 NZ_CAJZAV010000132.1 RefSeq gene 1075 2082 . - . ID=gene-LDO49_RS15860;Name=LDO49_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15860;old_locus_tag=BCEP4_2170003 NZ_CAJZAV010000132.1 Protein Homology CDS 1075 2082 . - 0 ID=cds-WP_193093546.1;Parent=gene-LDO49_RS15860;Dbxref=GenBank:WP_193093546.1;Name=WP_193093546.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486082.1;locus_tag=LDO49_RS15860;product=TauD/TfdA family dioxygenase;protein_id=WP_193093546.1;transl_table=11 NZ_CAJZAV010000132.1 RefSeq gene 2128 2370 . - . ID=gene-LDO49_RS15865;Name=LDO49_RS15865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15865;old_locus_tag=BCEP4_2170004 NZ_CAJZAV010000132.1 Protein Homology CDS 2128 2370 . - 0 ID=cds-WP_021163602.1;Parent=gene-LDO49_RS15865;Dbxref=GenBank:WP_021163602.1;Name=WP_021163602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363848.1;locus_tag=LDO49_RS15865;product=MbtH family protein;protein_id=WP_021163602.1;transl_table=11 NZ_CAJZAV010000132.1 RefSeq gene 2479 3135 . - . ID=gene-LDO49_RS15870;Name=LDO49_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15870;old_locus_tag=BCEP4_2170005 NZ_CAJZAV010000132.1 Protein Homology CDS 2479 3135 . - 0 ID=cds-WP_027787449.1;Parent=gene-LDO49_RS15870;Dbxref=GenBank:WP_027787449.1;Name=WP_027787449.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476053.1;locus_tag=LDO49_RS15870;product=RNA polymerase factor sigma-70;protein_id=WP_027787449.1;transl_table=11 NZ_CAJZAV010000132.1 RefSeq gene 3461 3703 . + . ID=gene-LDO49_RS15875;Name=LDO49_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15875;old_locus_tag=BCEP4_2170006 NZ_CAJZAV010000132.1 Protein Homology CDS 3461 3703 . + 0 ID=cds-WP_081075925.1;Parent=gene-LDO49_RS15875;Dbxref=GenBank:WP_081075925.1;Name=WP_081075925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414153.1;locus_tag=LDO49_RS15875;product=hypothetical protein;protein_id=WP_081075925.1;transl_table=11 NZ_CAJZAV010000132.1 RefSeq gene 3752 3889 . + . ID=gene-LDO49_RS15880;Name=LDO49_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15880;old_locus_tag=BCEP4_2170007 NZ_CAJZAV010000132.1 Protein Homology CDS 3752 3889 . + 0 ID=cds-WP_021163599.1;Parent=gene-LDO49_RS15880;Dbxref=GenBank:WP_021163599.1;Name=WP_021163599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897078.1;locus_tag=LDO49_RS15880;product=HHHH-motif protein;protein_id=WP_021163599.1;transl_table=11 NZ_CAJZAV010000132.1 RefSeq gene 3955 5298 . - . ID=gene-LDO49_RS15885;Name=LDO49_RS15885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15885;old_locus_tag=BCEP4_2170008 NZ_CAJZAV010000132.1 Protein Homology CDS 3955 5298 . - 0 ID=cds-WP_224052000.1;Parent=gene-LDO49_RS15885;Dbxref=GenBank:WP_224052000.1;Name=WP_224052000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006499085.1;locus_tag=LDO49_RS15885;product=calcium-binding protein;protein_id=WP_224052000.1;transl_table=11 NZ_CAJZAV010000132.1 RefSeq gene 5383 6408 . - . ID=gene-LDO49_RS15890;Name=LDO49_RS15890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15890;old_locus_tag=BCEP4_2170009 NZ_CAJZAV010000132.1 Protein Homology CDS 5383 6408 . - 0 ID=cds-WP_059861754.1;Parent=gene-LDO49_RS15890;Dbxref=GenBank:WP_059861754.1;Name=WP_059861754.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103818.1;locus_tag=LDO49_RS15890;product=fimbrial protein;protein_id=WP_059861754.1;transl_table=11 NZ_CAJZAV010000132.1 RefSeq gene 6405 7151 . - . ID=gene-LDO49_RS15895;Name=LDO49_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15895;old_locus_tag=BCEP4_2170010 NZ_CAJZAV010000132.1 Protein Homology CDS 6405 7151 . - 0 ID=cds-WP_224052001.1;Parent=gene-LDO49_RS15895;Dbxref=GenBank:WP_224052001.1;Name=WP_224052001.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414162.1;locus_tag=LDO49_RS15895;product=fimbrial biogenesis chaperone;protein_id=WP_224052001.1;transl_table=11 NZ_CAJZAV010000132.1 RefSeq gene 7168 9621 . - . ID=gene-LDO49_RS15900;Name=LDO49_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15900;old_locus_tag=BCEP4_2170011 NZ_CAJZAV010000132.1 Protein Homology CDS 7168 9621 . - 0 ID=cds-WP_021163595.1;Parent=gene-LDO49_RS15900;Dbxref=GenBank:WP_021163595.1;Name=WP_021163595.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753782.1;locus_tag=LDO49_RS15900;product=fimbria/pilus outer membrane usher protein;protein_id=WP_021163595.1;transl_table=11 NZ_CAJZAV010000132.1 RefSeq gene 9740 10252 . - . ID=gene-LDO49_RS15905;Name=LDO49_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15905;old_locus_tag=BCEP4_2170012 NZ_CAJZAV010000132.1 Protein Homology CDS 9740 10252 . - 0 ID=cds-WP_021163594.1;Parent=gene-LDO49_RS15905;Dbxref=GenBank:WP_021163594.1;Name=WP_021163594.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193385.1;locus_tag=LDO49_RS15905;product=fimbrial protein;protein_id=WP_021163594.1;transl_table=11 NZ_CAJZAV010000132.1 RefSeq gene 11047 12507 . - . ID=gene-LDO49_RS15910;Name=LDO49_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15910;old_locus_tag=BCEP4_2170014 NZ_CAJZAV010000132.1 Protein Homology CDS 11047 12507 . - 0 ID=cds-WP_224052003.1;Parent=gene-LDO49_RS15910;Dbxref=GenBank:WP_224052003.1;Name=WP_224052003.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545363.1;locus_tag=LDO49_RS15910;product=efflux transporter outer membrane subunit;protein_id=WP_224052003.1;transl_table=11 NZ_CAJZAV010000132.1 RefSeq gene 12507 12704 . - . ID=gene-LDO49_RS15915;Name=LDO49_RS15915;end_range=12704,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15915;old_locus_tag=BCEP4_2170015;partial=true NZ_CAJZAV010000132.1 Protein Homology CDS 12507 12704 . - 0 ID=cds-WP_224052002.1;Parent=gene-LDO49_RS15915;Dbxref=GenBank:WP_224052002.1;Name=WP_224052002.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=12704,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213376.1;locus_tag=LDO49_RS15915;partial=true;product=efflux RND transporter permease subunit;protein_id=WP_224052002.1;transl_table=11 ##sequence-region NZ_CAJZAV010000133.1 1 2666 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000133.1 RefSeq region 1 2666 . + . ID=NZ_CAJZAV010000133.1:1..2666;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_218 NZ_CAJZAV010000133.1 RefSeq pseudogene 1 445 . + . ID=gene-LDO49_RS15920;Name=LDO49_RS15920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS15920;old_locus_tag=BCEP4_2180001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000133.1 Protein Homology CDS 1 445 . + 1 ID=cds-LDO49_RS15920;Parent=gene-LDO49_RS15920;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897034.1;locus_tag=LDO49_RS15920;partial=true;product=precorrin-3B synthase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000133.1 RefSeq gene 438 1064 . + . ID=gene-LDO49_RS15925;Name=LDO49_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15925;old_locus_tag=BCEP4_2180002 NZ_CAJZAV010000133.1 Protein Homology CDS 438 1064 . + 0 ID=cds-WP_027787410.1;Parent=gene-LDO49_RS15925;Dbxref=GenBank:WP_027787410.1;Name=WP_027787410.1;Ontology_term=GO:0009236,GO:0016993;gbkey=CDS;go_function=precorrin-8X methylmutase activity|0016993||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017778279.1;locus_tag=LDO49_RS15925;product=precorrin-8X methylmutase;protein_id=WP_027787410.1;transl_table=11 NZ_CAJZAV010000133.1 RefSeq gene 1061 1795 . + . ID=gene-LDO49_RS15930;Name=LDO49_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15930;old_locus_tag=BCEP4_2180003 NZ_CAJZAV010000133.1 Protein Homology CDS 1061 1795 . + 0 ID=cds-WP_048020553.1;Parent=gene-LDO49_RS15930;Dbxref=GenBank:WP_048020553.1;Name=WP_048020553.1;Ontology_term=GO:0009236,GO:0030788;gbkey=CDS;go_function=precorrin-2 C20-methyltransferase activity|0030788||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601722.1;locus_tag=LDO49_RS15930;product=precorrin-2 C(20)-methyltransferase;protein_id=WP_048020553.1;transl_table=11 NZ_CAJZAV010000133.1 RefSeq pseudogene 1792 2500 . + . ID=gene-LDO49_RS15935;Name=LDO49_RS15935;end_range=2500,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS15935;old_locus_tag=BCEP4_2180004;partial=true;pseudo=true NZ_CAJZAV010000133.1 Protein Homology CDS 1792 2500 . + 0 ID=cds-LDO49_RS15935;Parent=gene-LDO49_RS15935;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2500,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213339.1;locus_tag=LDO49_RS15935;partial=true;product=cobalamin biosynthesis protein CbiG;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000134.1 1 9842 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000134.1 RefSeq region 1 9842 . + . ID=NZ_CAJZAV010000134.1:1..9842;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_219 NZ_CAJZAV010000134.1 RefSeq gene 1 562 . - . ID=gene-LDO49_RS15940;Name=LDO49_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15940;partial=true;start_range=.,1 NZ_CAJZAV010000134.1 Protein Homology CDS 1 562 . - 0 ID=cds-WP_224052005.1;Parent=gene-LDO49_RS15940;Dbxref=GenBank:WP_224052005.1;Name=WP_224052005.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350595.1;locus_tag=LDO49_RS15940;partial=true;product=Hpt domain-containing protein;protein_id=WP_224052005.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000134.1 RefSeq gene 596 973 . - . ID=gene-LDO49_RS15945;Name=LDO49_RS15945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15945;old_locus_tag=BCEP4_2190002 NZ_CAJZAV010000134.1 Protein Homology CDS 596 973 . - 0 ID=cds-WP_021164383.1;Parent=gene-LDO49_RS15945;Dbxref=GenBank:WP_021164383.1;Name=WP_021164383.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482646.1;locus_tag=LDO49_RS15945;product=response regulator;protein_id=WP_021164383.1;transl_table=11 NZ_CAJZAV010000134.1 RefSeq gene 998 2017 . - . ID=gene-LDO49_RS15950;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=LDO49_RS15950;old_locus_tag=BCEP4_2190003 NZ_CAJZAV010000134.1 Protein Homology CDS 998 2017 . - 0 ID=cds-WP_048025309.1;Parent=gene-LDO49_RS15950;Dbxref=GenBank:WP_048025309.1;Name=WP_048025309.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010107083.1;locus_tag=LDO49_RS15950;product=flagellar motor protein MotB;protein_id=WP_048025309.1;transl_table=11 NZ_CAJZAV010000134.1 RefSeq gene 2031 2891 . - . ID=gene-LDO49_RS15955;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=LDO49_RS15955;old_locus_tag=BCEP4_2190004 NZ_CAJZAV010000134.1 Protein Homology CDS 2031 2891 . - 0 ID=cds-WP_011350592.1;Parent=gene-LDO49_RS15955;Dbxref=GenBank:WP_011350592.1;Name=WP_011350592.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013090904.1;locus_tag=LDO49_RS15955;product=flagellar motor stator protein MotA;protein_id=WP_011350592.1;transl_table=11 NZ_CAJZAV010000134.1 RefSeq gene 3071 3625 . - . ID=gene-LDO49_RS15960;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=LDO49_RS15960;old_locus_tag=BCEP4_2190005 NZ_CAJZAV010000134.1 Protein Homology CDS 3071 3625 . - 0 ID=cds-WP_011350591.1;Parent=gene-LDO49_RS15960;Dbxref=GenBank:WP_011350591.1;Name=WP_011350591.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760462.1;locus_tag=LDO49_RS15960;product=flagellar transcriptional regulator FlhC;protein_id=WP_011350591.1;transl_table=11 NZ_CAJZAV010000134.1 RefSeq gene 3722 4042 . - . ID=gene-LDO49_RS15965;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=LDO49_RS15965;old_locus_tag=BCEP4_2190007 NZ_CAJZAV010000134.1 Protein Homology CDS 3722 4042 . - 0 ID=cds-WP_027788649.1;Parent=gene-LDO49_RS15965;Dbxref=GenBank:WP_027788649.1;Name=WP_027788649.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198199.1;locus_tag=LDO49_RS15965;product=flagellar transcriptional regulator FlhD;protein_id=WP_027788649.1;transl_table=11 NZ_CAJZAV010000134.1 RefSeq gene 4705 5769 . + . ID=gene-LDO49_RS15970;Name=LDO49_RS15970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15970;old_locus_tag=BCEP4_2190008 NZ_CAJZAV010000134.1 Protein Homology CDS 4705 5769 . + 0 ID=cds-WP_021162850.1;Parent=gene-LDO49_RS15970;Dbxref=GenBank:WP_021162850.1;Name=WP_021162850.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415729.1;locus_tag=LDO49_RS15970;product=glycosyltransferase family 4 protein;protein_id=WP_021162850.1;transl_table=11 NZ_CAJZAV010000134.1 RefSeq gene 5876 6172 . - . ID=gene-LDO49_RS15975;Name=LDO49_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15975;old_locus_tag=BCEP4_2190009 NZ_CAJZAV010000134.1 Protein Homology CDS 5876 6172 . - 0 ID=cds-WP_021162849.1;Parent=gene-LDO49_RS15975;Dbxref=GenBank:WP_021162849.1;Name=WP_021162849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762906.1;locus_tag=LDO49_RS15975;product=H-NS histone family protein;protein_id=WP_021162849.1;transl_table=11 NZ_CAJZAV010000134.1 RefSeq gene 6477 7217 . + . ID=gene-LDO49_RS15980;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=LDO49_RS15980;old_locus_tag=BCEP4_2190010 NZ_CAJZAV010000134.1 Protein Homology CDS 6477 7217 . + 0 ID=cds-WP_021162848.1;Parent=gene-LDO49_RS15980;Dbxref=GenBank:WP_021162848.1;Name=WP_021162848.1;Ontology_term=GO:0006833,GO:0015250;gbkey=CDS;gene=aqpZ;go_function=water channel activity|0015250||IEA;go_process=water transport|0006833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477345.1;locus_tag=LDO49_RS15980;product=aquaporin Z;protein_id=WP_021162848.1;transl_table=11 NZ_CAJZAV010000134.1 RefSeq gene 7336 8160 . - . ID=gene-LDO49_RS15985;Name=LDO49_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15985;old_locus_tag=BCEP4_2190011 NZ_CAJZAV010000134.1 Protein Homology CDS 7336 8160 . - 0 ID=cds-WP_048025307.1;Parent=gene-LDO49_RS15985;Dbxref=GenBank:WP_048025307.1;Name=WP_048025307.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546718.1;locus_tag=LDO49_RS15985;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_048025307.1;transl_table=11 NZ_CAJZAV010000134.1 RefSeq pseudogene 8304 8724 . - . ID=gene-LDO49_RS38095;Name=LDO49_RS38095;end_range=8724,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38095;old_locus_tag=BCEP4_2190012;partial=true;pseudo=true NZ_CAJZAV010000134.1 Protein Homology CDS 8304 8724 . - 1 ID=cds-LDO49_RS38095;Parent=gene-LDO49_RS38095;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=8724,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350585.1;locus_tag=LDO49_RS38095;partial=true;product=BadF/BadG/BcrA/BcrD ATPase family protein;pseudo=true;transl_table=11 NZ_CAJZAV010000134.1 RefSeq pseudogene 8735 9020 . - . ID=gene-LDO49_RS38100;Name=LDO49_RS38100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38100;old_locus_tag=BCEP4_2190013;partial=true;pseudo=true;start_range=.,8735 NZ_CAJZAV010000134.1 Protein Homology CDS 8735 9020 . - 0 ID=cds-LDO49_RS38100;Parent=gene-LDO49_RS38100;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760457.1;locus_tag=LDO49_RS38100;partial=true;product=BadF/BadG/BcrA/BcrD ATPase family protein;pseudo=true;start_range=.,8735;transl_table=11 NZ_CAJZAV010000134.1 RefSeq gene 9163 9765 . + . ID=gene-LDO49_RS15995;Name=LDO49_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS15995;old_locus_tag=BCEP4_2190014 NZ_CAJZAV010000134.1 Protein Homology CDS 9163 9765 . + 0 ID=cds-WP_060073610.1;Parent=gene-LDO49_RS15995;Dbxref=GenBank:WP_060073610.1;Name=WP_060073610.1;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401407.1;locus_tag=LDO49_RS15995;product=DNA-3-methyladenine glycosylase I;protein_id=WP_060073610.1;transl_table=11 ##sequence-region NZ_CAJZAV010000135.1 1 225561 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000135.1 RefSeq region 1 225561 . + . ID=NZ_CAJZAV010000135.1:1..225561;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_22 NZ_CAJZAV010000135.1 RefSeq pseudogene 1 250 . + . ID=gene-LDO49_RS38105;Name=LDO49_RS38105;end_range=250,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38105;old_locus_tag=BCEP4_220001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000135.1 Protein Homology CDS 1 250 . + 2 ID=cds-LDO49_RS38105;Parent=gene-LDO49_RS38105;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=250,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214288.1;locus_tag=LDO49_RS38105;partial=true;product=putrescine ABC transporter permease PotH;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 261 677 . + . ID=gene-LDO49_RS38110;Name=LDO49_RS38110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38110;old_locus_tag=BCEP4_220002;partial=true;start_range=.,261 NZ_CAJZAV010000135.1 Protein Homology CDS 261 677 . + 0 ID=cds-WP_155704476.1;Parent=gene-LDO49_RS38110;Dbxref=GenBank:WP_155704476.1;Name=WP_155704476.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214288.1;locus_tag=LDO49_RS38110;partial=true;product=ABC transporter permease subunit;protein_id=WP_155704476.1;start_range=.,261;transl_table=11 NZ_CAJZAV010000135.1 RefSeq pseudogene 674 1137 . + . ID=gene-LDO49_RS38115;Name=LDO49_RS38115;end_range=1137,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38115;old_locus_tag=BCEP4_220003;partial=true;pseudo=true NZ_CAJZAV010000135.1 Protein Homology CDS 674 1137 . + 0 ID=cds-LDO49_RS38115;Parent=gene-LDO49_RS38115;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1137,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760185.1;locus_tag=LDO49_RS38115;partial=true;product=putrescine ABC transporter permease PotI;pseudo=true;transl_table=11 NZ_CAJZAV010000135.1 RefSeq pseudogene 1148 1417 . + . ID=gene-LDO49_RS37550;Name=LDO49_RS37550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37550;old_locus_tag=BCEP4_220004;partial=true;pseudo=true;start_range=.,1148 NZ_CAJZAV010000135.1 Protein Homology CDS 1148 1417 . + 0 ID=cds-LDO49_RS37550;Parent=gene-LDO49_RS37550;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760185.1;locus_tag=LDO49_RS37550;partial=true;product=putrescine ABC transporter permease PotI;pseudo=true;start_range=.,1148;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 1810 2244 . + . ID=gene-LDO49_RS16010;Name=LDO49_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16010;old_locus_tag=BCEP4_220006 NZ_CAJZAV010000135.1 Protein Homology CDS 1810 2244 . + 0 ID=cds-WP_027789881.1;Parent=gene-LDO49_RS16010;Dbxref=GenBank:WP_027789881.1;Name=WP_027789881.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548408.1;locus_tag=LDO49_RS16010;product=GNAT family N-acetyltransferase;protein_id=WP_027789881.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 2384 3667 . - . ID=gene-LDO49_RS16015;Name=LDO49_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16015;old_locus_tag=BCEP4_220007 NZ_CAJZAV010000135.1 Protein Homology CDS 2384 3667 . - 0 ID=cds-WP_059488722.1;Parent=gene-LDO49_RS16015;Dbxref=GenBank:WP_059488722.1;Name=WP_059488722.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356398.1;locus_tag=LDO49_RS16015;product=cystathionine gamma-synthase family protein;protein_id=WP_059488722.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 3809 4705 . - . ID=gene-LDO49_RS16020;Name=LDO49_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16020;old_locus_tag=BCEP4_220008 NZ_CAJZAV010000135.1 Protein Homology CDS 3809 4705 . - 0 ID=cds-WP_224052008.1;Parent=gene-LDO49_RS16020;Dbxref=GenBank:WP_224052008.1;Name=WP_224052008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365235.1;locus_tag=LDO49_RS16020;product=LysR family transcriptional regulator;protein_id=WP_224052008.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 4845 5630 . + . ID=gene-LDO49_RS16025;Name=tam;gbkey=Gene;gene=tam;gene_biotype=protein_coding;locus_tag=LDO49_RS16025;old_locus_tag=BCEP4_220009 NZ_CAJZAV010000135.1 Protein Homology CDS 4845 5630 . + 0 ID=cds-WP_224052009.1;Parent=gene-LDO49_RS16025;Dbxref=GenBank:WP_224052009.1;Name=WP_224052009.1;Ontology_term=GO:0030798;gbkey=CDS;gene=tam;go_function=trans-aconitate 2-methyltransferase activity|0030798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495838.1;locus_tag=LDO49_RS16025;product=trans-aconitate 2-methyltransferase;protein_id=WP_224052009.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 5660 6250 . - . ID=gene-LDO49_RS16030;Name=LDO49_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16030;old_locus_tag=BCEP4_220010 NZ_CAJZAV010000135.1 Protein Homology CDS 5660 6250 . - 0 ID=cds-WP_021159949.1;Parent=gene-LDO49_RS16030;Dbxref=GenBank:WP_021159949.1;Name=WP_021159949.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479869.1;locus_tag=LDO49_RS16030;product=GNAT family N-acetyltransferase;protein_id=WP_021159949.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 6728 6994 . + . ID=gene-LDO49_RS16035;Name=LDO49_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16035 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 6728 6994 . + 0 ID=cds-WP_224052010.1;Parent=gene-LDO49_RS16035;Dbxref=GenBank:WP_224052010.1;Name=WP_224052010.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16035;product=hypothetical protein;protein_id=WP_224052010.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 7210 9660 . - . ID=gene-LDO49_RS16040;Name=LDO49_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16040;old_locus_tag=BCEP4_220012 NZ_CAJZAV010000135.1 Protein Homology CDS 7210 9660 . - 0 ID=cds-WP_224052012.1;Parent=gene-LDO49_RS16040;Dbxref=GenBank:WP_224052012.1;Name=WP_224052012.1;Ontology_term=GO:0034480;gbkey=CDS;go_function=phosphatidylcholine phospholipase C activity|0034480||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495833.1;locus_tag=LDO49_RS16040;product=phosphocholine-specific phospholipase C;protein_id=WP_224052012.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 9739 9933 . + . ID=gene-LDO49_RS16045;Name=LDO49_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16045 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 9739 9933 . + 0 ID=cds-WP_155631506.1;Parent=gene-LDO49_RS16045;Dbxref=GenBank:WP_155631506.1;Name=WP_155631506.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16045;product=hypothetical protein;protein_id=WP_155631506.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 10011 10691 . - . ID=gene-LDO49_RS16050;Name=LDO49_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16050;old_locus_tag=BCEP4_220014 NZ_CAJZAV010000135.1 Protein Homology CDS 10011 10691 . - 0 ID=cds-WP_224052014.1;Parent=gene-LDO49_RS16050;Dbxref=GenBank:WP_224052014.1;Name=WP_224052014.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482220.1;locus_tag=LDO49_RS16050;product=HAD family hydrolase;protein_id=WP_224052014.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 10715 11659 . - . ID=gene-LDO49_RS16055;Name=LDO49_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16055;old_locus_tag=BCEP4_220015 NZ_CAJZAV010000135.1 Protein Homology CDS 10715 11659 . - 0 ID=cds-WP_104765698.1;Parent=gene-LDO49_RS16055;Dbxref=GenBank:WP_104765698.1;Name=WP_104765698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482222.1;locus_tag=LDO49_RS16055;product=choline ABC transporter substrate-binding protein;protein_id=WP_104765698.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 11929 12609 . + . ID=gene-LDO49_RS16060;Name=LDO49_RS16060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16060;old_locus_tag=BCEP4_220017 NZ_CAJZAV010000135.1 Protein Homology CDS 11929 12609 . + 0 ID=cds-WP_027789870.1;Parent=gene-LDO49_RS16060;Dbxref=GenBank:WP_027789870.1;Name=WP_027789870.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356388.1;locus_tag=LDO49_RS16060;product=MgtC/SapB family protein;protein_id=WP_027789870.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 12653 13420 . + . ID=gene-LDO49_RS16065;Name=LDO49_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16065;old_locus_tag=BCEP4_220018 NZ_CAJZAV010000135.1 Protein Homology CDS 12653 13420 . + 0 ID=cds-WP_224052015.1;Parent=gene-LDO49_RS16065;Dbxref=GenBank:WP_224052015.1;Name=WP_224052015.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482225.1;locus_tag=LDO49_RS16065;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_224052015.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 13562 14071 . + . ID=gene-LDO49_RS16070;Name=LDO49_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16070;old_locus_tag=BCEP4_220019 NZ_CAJZAV010000135.1 Protein Homology CDS 13562 14071 . + 0 ID=cds-WP_224052016.1;Parent=gene-LDO49_RS16070;Dbxref=GenBank:WP_224052016.1;Name=WP_224052016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356386.1;locus_tag=LDO49_RS16070;product=molybdopterin-dependent oxidoreductase;protein_id=WP_224052016.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 14188 14511 . + . ID=gene-LDO49_RS16075;Name=LDO49_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16075;old_locus_tag=BCEP4_220020 NZ_CAJZAV010000135.1 Protein Homology CDS 14188 14511 . + 0 ID=cds-WP_021159959.1;Parent=gene-LDO49_RS16075;Dbxref=GenBank:WP_021159959.1;Name=WP_021159959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356385.1;locus_tag=LDO49_RS16075;product=winged helix-turn-helix domain-containing protein;protein_id=WP_021159959.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 14603 15949 . - . ID=gene-LDO49_RS16080;Name=LDO49_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16080;old_locus_tag=BCEP4_220021 NZ_CAJZAV010000135.1 Protein Homology CDS 14603 15949 . - 0 ID=cds-WP_224052018.1;Parent=gene-LDO49_RS16080;Dbxref=GenBank:WP_224052018.1;Name=WP_224052018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482218.1;locus_tag=LDO49_RS16080;product=DUF2325 domain-containing protein;protein_id=WP_224052018.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 16080 16631 . - . ID=gene-LDO49_RS16085;Name=LDO49_RS16085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16085;old_locus_tag=BCEP4_220022 NZ_CAJZAV010000135.1 Protein Homology CDS 16080 16631 . - 0 ID=cds-WP_224052019.1;Parent=gene-LDO49_RS16085;Dbxref=GenBank:WP_224052019.1;Name=WP_224052019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493093.1;locus_tag=LDO49_RS16085;product=hypothetical protein;protein_id=WP_224052019.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 17024 17980 . - . ID=gene-LDO49_RS16090;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=LDO49_RS16090;old_locus_tag=BCEP4_220024 NZ_CAJZAV010000135.1 Protein Homology CDS 17024 17980 . - 0 ID=cds-WP_021159962.1;Parent=gene-LDO49_RS16090;Dbxref=GenBank:WP_021159962.1;Name=WP_021159962.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356382.1;locus_tag=LDO49_RS16090;product=flagellar motor protein MotB;protein_id=WP_021159962.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 17991 18860 . - . ID=gene-LDO49_RS16095;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=LDO49_RS16095;old_locus_tag=BCEP4_220025 NZ_CAJZAV010000135.1 Protein Homology CDS 17991 18860 . - 0 ID=cds-WP_048024585.1;Parent=gene-LDO49_RS16095;Dbxref=GenBank:WP_048024585.1;Name=WP_048024585.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012403499.1;locus_tag=LDO49_RS16095;product=flagellar motor stator protein MotA;protein_id=WP_048024585.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 19459 20940 . - . ID=gene-LDO49_RS16100;Name=LDO49_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16100;old_locus_tag=BCEP4_220026 NZ_CAJZAV010000135.1 Protein Homology CDS 19459 20940 . - 0 ID=cds-WP_111999569.1;Parent=gene-LDO49_RS16100;Dbxref=GenBank:WP_111999569.1;Name=WP_111999569.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404465.1;locus_tag=LDO49_RS16100;product=aldehyde dehydrogenase family protein;protein_id=WP_111999569.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 20969 21919 . - . ID=gene-LDO49_RS16105;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=LDO49_RS16105;old_locus_tag=BCEP4_220027 NZ_CAJZAV010000135.1 Protein Homology CDS 20969 21919 . - 0 ID=cds-WP_027789862.1;Parent=gene-LDO49_RS16105;Dbxref=GenBank:WP_027789862.1;Name=WP_027789862.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900442.1;locus_tag=LDO49_RS16105;product=agmatinase;protein_id=WP_027789862.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 22088 22987 . - . ID=gene-LDO49_RS16110;Name=LDO49_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16110;old_locus_tag=BCEP4_220028 NZ_CAJZAV010000135.1 Protein Homology CDS 22088 22987 . - 0 ID=cds-WP_224052021.1;Parent=gene-LDO49_RS16110;Dbxref=GenBank:WP_224052021.1;Name=WP_224052021.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356377.1;locus_tag=LDO49_RS16110;product=helix-turn-helix transcriptional regulator;protein_id=WP_224052021.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 23186 23530 . + . ID=gene-LDO49_RS16115;Name=LDO49_RS16115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16115;old_locus_tag=BCEP4_220029 NZ_CAJZAV010000135.1 Protein Homology CDS 23186 23530 . + 0 ID=cds-WP_027789860.1;Parent=gene-LDO49_RS16115;Dbxref=GenBank:WP_027789860.1;Name=WP_027789860.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397739.1;locus_tag=LDO49_RS16115;product=cupin domain-containing protein;protein_id=WP_027789860.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 23615 25072 . + . ID=gene-LDO49_RS16120;Name=LDO49_RS16120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16120;old_locus_tag=BCEP4_220030 NZ_CAJZAV010000135.1 Protein Homology CDS 23615 25072 . + 0 ID=cds-WP_042975380.1;Parent=gene-LDO49_RS16120;Dbxref=GenBank:WP_042975380.1;Name=WP_042975380.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397740.1;locus_tag=LDO49_RS16120;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_042975380.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 25160 26350 . + . ID=gene-LDO49_RS16125;Name=LDO49_RS16125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16125;old_locus_tag=BCEP4_220031 NZ_CAJZAV010000135.1 Protein Homology CDS 25160 26350 . + 0 ID=cds-WP_224052022.1;Parent=gene-LDO49_RS16125;Dbxref=GenBank:WP_224052022.1;Name=WP_224052022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492867.1;locus_tag=LDO49_RS16125;product=MFS transporter;protein_id=WP_224052022.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 26480 27400 . + . ID=gene-LDO49_RS16130;Name=LDO49_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16130;old_locus_tag=BCEP4_220032 NZ_CAJZAV010000135.1 Protein Homology CDS 26480 27400 . + 0 ID=cds-WP_042975417.1;Parent=gene-LDO49_RS16130;Dbxref=GenBank:WP_042975417.1;Name=WP_042975417.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217687.1;locus_tag=LDO49_RS16130;product=LysR family transcriptional regulator;protein_id=WP_042975417.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 27416 28246 . - . ID=gene-LDO49_RS16135;Name=LDO49_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16135;old_locus_tag=BCEP4_220033 NZ_CAJZAV010000135.1 Protein Homology CDS 27416 28246 . - 0 ID=cds-WP_042975384.1;Parent=gene-LDO49_RS16135;Dbxref=GenBank:WP_042975384.1;Name=WP_042975384.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484603.1;locus_tag=LDO49_RS16135;product=helix-turn-helix transcriptional regulator;protein_id=WP_042975384.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 28485 30209 . + . ID=gene-LDO49_RS16140;Name=LDO49_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16140;old_locus_tag=BCEP4_220034 NZ_CAJZAV010000135.1 Protein Homology CDS 28485 30209 . + 0 ID=cds-WP_060054287.1;Parent=gene-LDO49_RS16140;Dbxref=GenBank:WP_060054287.1;Name=WP_060054287.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495818.1;locus_tag=LDO49_RS16140;product=amidohydrolase;protein_id=WP_060054287.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 30423 31538 . + . ID=gene-LDO49_RS16145;Name=LDO49_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16145;old_locus_tag=BCEP4_220035 NZ_CAJZAV010000135.1 Protein Homology CDS 30423 31538 . + 0 ID=cds-WP_021159975.1;Parent=gene-LDO49_RS16145;Dbxref=GenBank:WP_021159975.1;Name=WP_021159975.1;Ontology_term=GO:0015846,GO:0019808,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493097.1;locus_tag=LDO49_RS16145;product=polyamine ABC transporter substrate-binding protein;protein_id=WP_021159975.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 31635 33233 . + . ID=gene-LDO49_RS16150;Name=LDO49_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16150;old_locus_tag=BCEP4_220036 NZ_CAJZAV010000135.1 Protein Homology CDS 31635 33233 . + 0 ID=cds-WP_059654237.1;Parent=gene-LDO49_RS16150;Dbxref=GenBank:WP_059654237.1;Name=WP_059654237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493098.1;locus_tag=LDO49_RS16150;product=DUF3138 family protein;protein_id=WP_059654237.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 33350 34426 . + . ID=gene-LDO49_RS16155;Name=LDO49_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16155;old_locus_tag=BCEP4_220037 NZ_CAJZAV010000135.1 Protein Homology CDS 33350 34426 . + 0 ID=cds-WP_224052023.1;Parent=gene-LDO49_RS16155;Dbxref=GenBank:WP_224052023.1;Name=WP_224052023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900432.1;locus_tag=LDO49_RS16155;product=C45 family autoproteolytic acyltransferase/hydolase;protein_id=WP_224052023.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 34484 35869 . - . ID=gene-LDO49_RS16160;Name=LDO49_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16160;old_locus_tag=BCEP4_220038 NZ_CAJZAV010000135.1 Protein Homology CDS 34484 35869 . - 0 ID=cds-WP_060070669.1;Parent=gene-LDO49_RS16160;Dbxref=GenBank:WP_060070669.1;Name=WP_060070669.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404460.1;locus_tag=LDO49_RS16160;product=MFS transporter;protein_id=WP_060070669.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 36051 36911 . - . ID=gene-LDO49_RS16165;Name=LDO49_RS16165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16165;old_locus_tag=BCEP4_220039 NZ_CAJZAV010000135.1 Protein Homology CDS 36051 36911 . - 0 ID=cds-WP_060070673.1;Parent=gene-LDO49_RS16165;Dbxref=GenBank:WP_060070673.1;Name=WP_060070673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660104.1;locus_tag=LDO49_RS16165;product=XAC2610-related protein;protein_id=WP_060070673.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 36925 37677 . + . ID=gene-LDO49_RS16170;Name=LDO49_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16170;old_locus_tag=BCEP4_220040 NZ_CAJZAV010000135.1 Protein Homology CDS 36925 37677 . + 0 ID=cds-WP_224052024.1;Parent=gene-LDO49_RS16170;Dbxref=GenBank:WP_224052024.1;Name=WP_224052024.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013340.6;locus_tag=LDO49_RS16170;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_224052024.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 37674 38042 . - . ID=gene-LDO49_RS16175;Name=LDO49_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16175;old_locus_tag=BCEP4_220041 NZ_CAJZAV010000135.1 Protein Homology CDS 37674 38042 . - 0 ID=cds-WP_059488765.1;Parent=gene-LDO49_RS16175;Dbxref=GenBank:WP_059488765.1;Name=WP_059488765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356364.1;locus_tag=LDO49_RS16175;product=hypothetical protein;protein_id=WP_059488765.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 38073 38465 . - . ID=gene-LDO49_RS16180;Name=LDO49_RS16180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16180;old_locus_tag=BCEP4_220042 NZ_CAJZAV010000135.1 Protein Homology CDS 38073 38465 . - 0 ID=cds-WP_060070676.1;Parent=gene-LDO49_RS16180;Dbxref=GenBank:WP_060070676.1;Name=WP_060070676.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479865.1;locus_tag=LDO49_RS16180;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_060070676.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 38602 39234 . + . ID=gene-LDO49_RS16185;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=LDO49_RS16185;old_locus_tag=BCEP4_220043 NZ_CAJZAV010000135.1 Protein Homology CDS 38602 39234 . + 0 ID=cds-WP_224052025.1;Parent=gene-LDO49_RS16185;Dbxref=GenBank:WP_224052025.1;Name=WP_224052025.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694476.1;locus_tag=LDO49_RS16185;product=glutathione transferase GstA;protein_id=WP_224052025.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 39337 39720 . + . ID=gene-LDO49_RS16190;Name=LDO49_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16190;old_locus_tag=BCEP4_220044 NZ_CAJZAV010000135.1 Protein Homology CDS 39337 39720 . + 0 ID=cds-WP_042975387.1;Parent=gene-LDO49_RS16190;Dbxref=GenBank:WP_042975387.1;Name=WP_042975387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484529.1;locus_tag=LDO49_RS16190;product=hypothetical protein;protein_id=WP_042975387.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 39814 41106 . + . ID=gene-LDO49_RS16195;Name=LDO49_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16195;old_locus_tag=BCEP4_220045 NZ_CAJZAV010000135.1 Protein Homology CDS 39814 41106 . + 0 ID=cds-WP_224052026.1;Parent=gene-LDO49_RS16195;Dbxref=GenBank:WP_224052026.1;Name=WP_224052026.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875591.1;locus_tag=LDO49_RS16195;product=TolC family protein;protein_id=WP_224052026.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 41118 42659 . + . ID=gene-LDO49_RS16200;Name=LDO49_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16200;old_locus_tag=BCEP4_220047 NZ_CAJZAV010000135.1 Protein Homology CDS 41118 42659 . + 0 ID=cds-WP_060070685.1;Parent=gene-LDO49_RS16200;Dbxref=GenBank:WP_060070685.1;Name=WP_060070685.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548398.1;locus_tag=LDO49_RS16200;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_060070685.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 42656 45862 . + . ID=gene-LDO49_RS16205;Name=LDO49_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16205;old_locus_tag=BCEP4_220046 NZ_CAJZAV010000135.1 Protein Homology CDS 42656 45862 . + 0 ID=cds-WP_060070687.1;Parent=gene-LDO49_RS16205;Dbxref=GenBank:WP_060070687.1;Name=WP_060070687.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338825.1;locus_tag=LDO49_RS16205;product=efflux RND transporter permease subunit;protein_id=WP_060070687.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 45859 46227 . + . ID=gene-LDO49_RS16210;Name=LDO49_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16210;old_locus_tag=BCEP4_220048 NZ_CAJZAV010000135.1 Protein Homology CDS 45859 46227 . + 0 ID=cds-WP_059488773.1;Parent=gene-LDO49_RS16210;Dbxref=GenBank:WP_059488773.1;Name=WP_059488773.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012211074.1;locus_tag=LDO49_RS16210;product=copper-binding protein;protein_id=WP_059488773.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 46437 46769 . + . ID=gene-LDO49_RS16215;Name=LDO49_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16215;old_locus_tag=BCEP4_220049 NZ_CAJZAV010000135.1 Protein Homology CDS 46437 46769 . + 0 ID=cds-WP_042975389.1;Parent=gene-LDO49_RS16215;Dbxref=GenBank:WP_042975389.1;Name=WP_042975389.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020066555.1;locus_tag=LDO49_RS16215;product=ArsR/SmtB family transcription factor;protein_id=WP_042975389.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 46766 47836 . + . ID=gene-LDO49_RS16220;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=LDO49_RS16220;old_locus_tag=BCEP4_220050 NZ_CAJZAV010000135.1 Protein Homology CDS 46766 47836 . + 0 ID=cds-WP_059861173.1;Parent=gene-LDO49_RS16220;Dbxref=GenBank:WP_059861173.1;Name=WP_059861173.1;Ontology_term=GO:0015700,GO:0046685,GO:0008490,GO:0015103,GO:0015297,GO:0016020;gbkey=CDS;gene=arsB;go_component=membrane|0016020||IEA;go_function=arsenite secondary active transmembrane transporter activity|0008490||IEA,inorganic anion transmembrane transporter activity|0015103||IEA,antiporter activity|0015297||IEA;go_process=arsenite transport|0015700||IEA,response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429983.1;locus_tag=LDO49_RS16220;product=ACR3 family arsenite efflux transporter;protein_id=WP_059861173.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 47857 48279 . + . ID=gene-LDO49_RS16225;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=LDO49_RS16225;old_locus_tag=BCEP4_220051 NZ_CAJZAV010000135.1 Protein Homology CDS 47857 48279 . + 0 ID=cds-WP_042975391.1;Parent=gene-LDO49_RS16225;Dbxref=GenBank:WP_042975391.1;Name=WP_042975391.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009523256.1;locus_tag=LDO49_RS16225;product=arsenate reductase (glutaredoxin);protein_id=WP_042975391.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 48257 48994 . + . ID=gene-LDO49_RS16230;Name=arsH;gbkey=Gene;gene=arsH;gene_biotype=protein_coding;locus_tag=LDO49_RS16230;old_locus_tag=BCEP4_220052 NZ_CAJZAV010000135.1 Protein Homology CDS 48257 48994 . + 0 ID=cds-WP_224052027.1;Parent=gene-LDO49_RS16230;Dbxref=GenBank:WP_224052027.1;Name=WP_224052027.1;Ontology_term=GO:0046685;gbkey=CDS;gene=arsH;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012211085.1;locus_tag=LDO49_RS16230;product=arsenical resistance protein ArsH;protein_id=WP_224052027.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 49068 50078 . - . ID=gene-LDO49_RS16235;Name=LDO49_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16235;old_locus_tag=BCEP4_220053 NZ_CAJZAV010000135.1 Protein Homology CDS 49068 50078 . - 0 ID=cds-WP_111999400.1;Parent=gene-LDO49_RS16235;Dbxref=GenBank:WP_111999400.1;Name=WP_111999400.1;Ontology_term=GO:0006874,GO:0008273;gbkey=CDS;go_function=calcium%2C potassium:sodium antiporter activity|0008273||IEA;go_process=intracellular calcium ion homeostasis|0006874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484621.1;locus_tag=LDO49_RS16235;product=sodium:calcium antiporter;protein_id=WP_111999400.1;transl_table=11 NZ_CAJZAV010000135.1 cmsearch riboswitch 50153 50327 . - . ID=id-NZ_CAJZAV010000135.1:50153..50327;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAV010000135.1 RefSeq gene 51016 51705 . + . ID=gene-LDO49_RS16240;Name=LDO49_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16240;old_locus_tag=BCEP4_220056 NZ_CAJZAV010000135.1 Protein Homology CDS 51016 51705 . + 0 ID=cds-WP_060070693.1;Parent=gene-LDO49_RS16240;Dbxref=GenBank:WP_060070693.1;Name=WP_060070693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405263.1;locus_tag=LDO49_RS16240;product=hypothetical protein;protein_id=WP_060070693.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 52113 52388 . + . ID=gene-LDO49_RS16245;Name=LDO49_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16245;old_locus_tag=BCEP4_220058 NZ_CAJZAV010000135.1 Protein Homology CDS 52113 52388 . + 0 ID=cds-WP_021159994.1;Parent=gene-LDO49_RS16245;Dbxref=GenBank:WP_021159994.1;Name=WP_021159994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009941095.1;locus_tag=LDO49_RS16245;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_021159994.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 52401 53408 . + . ID=gene-LDO49_RS16250;Name=dmeF;gbkey=Gene;gene=dmeF;gene_biotype=protein_coding;locus_tag=LDO49_RS16250;old_locus_tag=BCEP4_220059 NZ_CAJZAV010000135.1 Protein Homology CDS 52401 53408 . + 0 ID=cds-WP_060070698.1;Parent=gene-LDO49_RS16250;Dbxref=GenBank:WP_060070698.1;Name=WP_060070698.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=dmeF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404566.1;locus_tag=LDO49_RS16250;product=CDF family Co(II)/Ni(II) efflux transporter DmeF;protein_id=WP_060070698.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 53411 53596 . + . ID=gene-LDO49_RS16255;Name=LDO49_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16255;old_locus_tag=BCEP4_220060 NZ_CAJZAV010000135.1 Protein Homology CDS 53411 53596 . + 0 ID=cds-WP_021159996.1;Parent=gene-LDO49_RS16255;Dbxref=GenBank:WP_021159996.1;Name=WP_021159996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338820.1;locus_tag=LDO49_RS16255;product=DUF1289 domain-containing protein;protein_id=WP_021159996.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq pseudogene 53670 53825 . - . ID=gene-LDO49_RS16260;Name=LDO49_RS16260;end_range=53825,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS16260;old_locus_tag=BCEP4_220061;partial=true;pseudo=true NZ_CAJZAV010000135.1 Protein Homology CDS 53670 53825 . - 0 ID=cds-LDO49_RS16260;Parent=gene-LDO49_RS16260;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=53825,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495805.1;locus_tag=LDO49_RS16260;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_CAJZAV010000135.1 RefSeq pseudogene 53815 54528 . + . ID=gene-LDO49_RS16265;Name=LDO49_RS16265;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS16265;old_locus_tag=BCEP4_220062;partial=true;pseudo=true;start_range=.,53815 NZ_CAJZAV010000135.1 Protein Homology CDS 53815 54528 . + 0 ID=cds-LDO49_RS16265;Parent=gene-LDO49_RS16265;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760112.1;locus_tag=LDO49_RS16265;partial=true;product=copper resistance D family protein;pseudo=true;start_range=.,53815;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 54744 56558 . + . ID=gene-LDO49_RS16270;Name=LDO49_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16270;old_locus_tag=BCEP4_220063 NZ_CAJZAV010000135.1 Protein Homology CDS 54744 56558 . + 0 ID=cds-WP_060070702.1;Parent=gene-LDO49_RS16270;Dbxref=GenBank:WP_060070702.1;Name=WP_060070702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900411.1;locus_tag=LDO49_RS16270;product=ExeM/NucH family extracellular endonuclease;protein_id=WP_060070702.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 57291 59138 . + . ID=gene-LDO49_RS16275;Name=LDO49_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16275;old_locus_tag=BCEP4_220065 NZ_CAJZAV010000135.1 Protein Homology CDS 57291 59138 . + 0 ID=cds-WP_060070705.1;Parent=gene-LDO49_RS16275;Dbxref=GenBank:WP_060070705.1;Name=WP_060070705.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479844.1;locus_tag=LDO49_RS16275;product=S10 family serine carboxypeptidase-like protein;protein_id=WP_060070705.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 59182 59613 . + . ID=gene-LDO49_RS16280;Name=LDO49_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16280;old_locus_tag=BCEP4_220066 NZ_CAJZAV010000135.1 Protein Homology CDS 59182 59613 . + 0 ID=cds-WP_051392297.1;Parent=gene-LDO49_RS16280;Dbxref=GenBank:WP_051392297.1;Name=WP_051392297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548379.1;locus_tag=LDO49_RS16280;product=hypothetical protein;protein_id=WP_051392297.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 59679 59879 . - . ID=gene-LDO49_RS37200;Name=LDO49_RS37200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37200;old_locus_tag=BCEP4_220067 NZ_CAJZAV010000135.1 Protein Homology CDS 59679 59879 . - 0 ID=cds-WP_230944171.1;Parent=gene-LDO49_RS37200;Dbxref=GenBank:WP_230944171.1;Name=WP_230944171.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024242.6;locus_tag=LDO49_RS37200;product=helix-turn-helix domain-containing protein;protein_id=WP_230944171.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 59915 60925 . - . ID=gene-LDO49_RS16290;Name=LDO49_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16290;old_locus_tag=BCEP4_220068 NZ_CAJZAV010000135.1 Protein Homology CDS 59915 60925 . - 0 ID=cds-WP_060070712.1;Parent=gene-LDO49_RS16290;Dbxref=GenBank:WP_060070712.1;Name=WP_060070712.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356338.1;locus_tag=LDO49_RS16290;product=GlxA family transcriptional regulator;protein_id=WP_060070712.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 61014 62114 . + . ID=gene-LDO49_RS16295;Name=LDO49_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16295;old_locus_tag=BCEP4_220069 NZ_CAJZAV010000135.1 Protein Homology CDS 61014 62114 . + 0 ID=cds-WP_060070714.1;Parent=gene-LDO49_RS16295;Dbxref=GenBank:WP_060070714.1;Name=WP_060070714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356337.1;locus_tag=LDO49_RS16295;product=DJ-1/PfpI family protein;protein_id=WP_060070714.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 62132 62551 . - . ID=gene-LDO49_RS16300;Name=LDO49_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16300;old_locus_tag=BCEP4_220070 NZ_CAJZAV010000135.1 Protein Homology CDS 62132 62551 . - 0 ID=cds-WP_059488801.1;Parent=gene-LDO49_RS16300;Dbxref=GenBank:WP_059488801.1;Name=WP_059488801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495792.1;locus_tag=LDO49_RS16300;product=hypothetical protein;protein_id=WP_059488801.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 62690 63769 . - . ID=gene-LDO49_RS16305;Name=LDO49_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16305;old_locus_tag=BCEP4_220071 NZ_CAJZAV010000135.1 Protein Homology CDS 62690 63769 . - 0 ID=cds-WP_059556088.1;Parent=gene-LDO49_RS16305;Dbxref=GenBank:WP_059556088.1;Name=WP_059556088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479838.1;locus_tag=LDO49_RS16305;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_059556088.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 63879 64670 . + . ID=gene-LDO49_RS16310;Name=LDO49_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16310;old_locus_tag=BCEP4_220072 NZ_CAJZAV010000135.1 Protein Homology CDS 63879 64670 . + 0 ID=cds-WP_059589280.1;Parent=gene-LDO49_RS16310;Dbxref=GenBank:WP_059589280.1;Name=WP_059589280.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548375.1;locus_tag=LDO49_RS16310;product=helix-turn-helix transcriptional regulator;protein_id=WP_059589280.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 64768 66246 . - . ID=gene-LDO49_RS16315;Name=LDO49_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16315;old_locus_tag=BCEP4_220073 NZ_CAJZAV010000135.1 Protein Homology CDS 64768 66246 . - 0 ID=cds-WP_060070717.1;Parent=gene-LDO49_RS16315;Dbxref=GenBank:WP_060070717.1;Name=WP_060070717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495788.1;locus_tag=LDO49_RS16315;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_060070717.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 66517 66822 . - . ID=gene-LDO49_RS16320;Name=LDO49_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16320;old_locus_tag=BCEP4_220075 NZ_CAJZAV010000135.1 Protein Homology CDS 66517 66822 . - 0 ID=cds-WP_060070720.1;Parent=gene-LDO49_RS16320;Dbxref=GenBank:WP_060070720.1;Name=WP_060070720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752296.1;locus_tag=LDO49_RS16320;product=TrfB-related DNA-binding protein;protein_id=WP_060070720.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 66841 67098 . - . ID=gene-LDO49_RS16325;Name=LDO49_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16325;old_locus_tag=BCEP4_220076 NZ_CAJZAV010000135.1 Protein Homology CDS 66841 67098 . - 0 ID=cds-WP_081052751.1;Parent=gene-LDO49_RS16325;Dbxref=GenBank:WP_081052751.1;Name=WP_081052751.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752297.1;locus_tag=LDO49_RS16325;product=PAAR domain-containing protein;protein_id=WP_081052751.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 67169 68650 . - . ID=gene-LDO49_RS16330;Name=LDO49_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16330;old_locus_tag=BCEP4_220077 NZ_CAJZAV010000135.1 Protein Homology CDS 67169 68650 . - 0 ID=cds-WP_224052030.1;Parent=gene-LDO49_RS16330;Dbxref=GenBank:WP_224052030.1;Name=WP_224052030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365270.1;locus_tag=LDO49_RS16330;product=virulence factor;protein_id=WP_224052030.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 68647 70821 . - . ID=gene-LDO49_RS16335;Name=LDO49_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16335;old_locus_tag=BCEP4_220078 NZ_CAJZAV010000135.1 Protein Homology CDS 68647 70821 . - 0 ID=cds-WP_060070723.1;Parent=gene-LDO49_RS16335;Dbxref=GenBank:WP_060070723.1;Name=WP_060070723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013204734.1;locus_tag=LDO49_RS16335;product=T6SS effector phospholipase Tle3 domain-containing protein;protein_id=WP_060070723.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 70964 73732 . - . ID=gene-LDO49_RS16340;Name=LDO49_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16340;old_locus_tag=BCEP4_220079 NZ_CAJZAV010000135.1 Protein Homology CDS 70964 73732 . - 0 ID=cds-WP_060070727.1;Parent=gene-LDO49_RS16340;Dbxref=GenBank:WP_060070727.1;Name=WP_060070727.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759982.1;locus_tag=LDO49_RS16340;product=type VI secretion system Vgr family protein;protein_id=WP_060070727.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 74675 75928 . + . ID=gene-LDO49_RS16345;Name=LDO49_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16345;old_locus_tag=BCEP4_220081 NZ_CAJZAV010000135.1 Protein Homology CDS 74675 75928 . + 0 ID=cds-WP_059860892.1;Parent=gene-LDO49_RS16345;Dbxref=GenBank:WP_059860892.1;Name=WP_059860892.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484557.1;locus_tag=LDO49_RS16345;product=MFS transporter;protein_id=WP_059860892.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 76087 77016 . + . ID=gene-LDO49_RS16350;Name=LDO49_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16350;old_locus_tag=BCEP4_220082 NZ_CAJZAV010000135.1 Protein Homology CDS 76087 77016 . + 0 ID=cds-WP_059817496.1;Parent=gene-LDO49_RS16350;Dbxref=GenBank:WP_059817496.1;Name=WP_059817496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900397.1;locus_tag=LDO49_RS16350;product=LysR family transcriptional regulator;protein_id=WP_059817496.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 77132 77626 . + . ID=gene-LDO49_RS16355;Name=LDO49_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16355;old_locus_tag=BCEP4_220083 NZ_CAJZAV010000135.1 Protein Homology CDS 77132 77626 . + 0 ID=cds-WP_059488817.1;Parent=gene-LDO49_RS16355;Dbxref=GenBank:WP_059488817.1;Name=WP_059488817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399235.1;locus_tag=LDO49_RS16355;product=hypothetical protein;protein_id=WP_059488817.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 77665 78684 . + . ID=gene-LDO49_RS16360;Name=LDO49_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16360;old_locus_tag=BCEP4_220085 NZ_CAJZAV010000135.1 Protein Homology CDS 77665 78684 . + 0 ID=cds-WP_060070729.1;Parent=gene-LDO49_RS16360;Dbxref=GenBank:WP_060070729.1;Name=WP_060070729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900395.1;locus_tag=LDO49_RS16360;product=hypothetical protein;protein_id=WP_060070729.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 78729 80195 . + . ID=gene-LDO49_RS16365;Name=LDO49_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16365;old_locus_tag=BCEP4_220086 NZ_CAJZAV010000135.1 Protein Homology CDS 78729 80195 . + 0 ID=cds-WP_060070733.1;Parent=gene-LDO49_RS16365;Dbxref=GenBank:WP_060070733.1;Name=WP_060070733.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900394.1;locus_tag=LDO49_RS16365;product=aldehyde dehydrogenase family protein;protein_id=WP_060070733.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 80204 81271 . + . ID=gene-LDO49_RS16370;Name=LDO49_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16370;old_locus_tag=BCEP4_220087 NZ_CAJZAV010000135.1 Protein Homology CDS 80204 81271 . + 0 ID=cds-WP_059654150.1;Parent=gene-LDO49_RS16370;Dbxref=GenBank:WP_059654150.1;Name=WP_059654150.1;Ontology_term=GO:0018506,GO:0030554,GO:0046872;gbkey=CDS;go_function=maleylacetate reductase activity|0018506||IEA,adenyl nucleotide binding|0030554||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399232.1;locus_tag=LDO49_RS16370;product=maleylacetate reductase;protein_id=WP_059654150.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 81299 81436 . + . ID=gene-LDO49_RS16375;Name=LDO49_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16375 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 81299 81436 . + 0 ID=cds-WP_155630089.1;Parent=gene-LDO49_RS16375;Dbxref=GenBank:WP_155630089.1;Name=WP_155630089.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16375;product=hypothetical protein;protein_id=WP_155630089.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 81442 81753 . + . ID=gene-LDO49_RS16380;Name=LDO49_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16380;old_locus_tag=BCEP4_220088 NZ_CAJZAV010000135.1 Protein Homology CDS 81442 81753 . + 0 ID=cds-WP_021160030.1;Parent=gene-LDO49_RS16380;Dbxref=GenBank:WP_021160030.1;Name=WP_021160030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660145.1;locus_tag=LDO49_RS16380;product=YciI family protein;protein_id=WP_021160030.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 81757 82092 . + . ID=gene-LDO49_RS16385;Name=LDO49_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16385;old_locus_tag=BCEP4_220089 NZ_CAJZAV010000135.1 Protein Homology CDS 81757 82092 . + 0 ID=cds-WP_060070736.1;Parent=gene-LDO49_RS16385;Dbxref=GenBank:WP_060070736.1;Name=WP_060070736.1;Ontology_term=GO:0046872,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365280.1;locus_tag=LDO49_RS16385;product=Rieske (2Fe-2S) protein;protein_id=WP_060070736.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 82290 83378 . + . ID=gene-LDO49_RS16390;Name=LDO49_RS16390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16390;old_locus_tag=BCEP4_220090 NZ_CAJZAV010000135.1 Protein Homology CDS 82290 83378 . + 0 ID=cds-WP_060070739.1;Parent=gene-LDO49_RS16390;Dbxref=GenBank:WP_060070739.1;Name=WP_060070739.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752310.1;locus_tag=LDO49_RS16390;product=porin;protein_id=WP_060070739.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 83424 84083 . - . ID=gene-LDO49_RS16395;Name=LDO49_RS16395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16395;old_locus_tag=BCEP4_220091 NZ_CAJZAV010000135.1 Protein Homology CDS 83424 84083 . - 0 ID=cds-WP_059589296.1;Parent=gene-LDO49_RS16395;Dbxref=GenBank:WP_059589296.1;Name=WP_059589296.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759993.1;locus_tag=LDO49_RS16395;product=glutathione S-transferase family protein;protein_id=WP_059589296.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 84207 85019 . + . ID=gene-LDO49_RS16400;Name=LDO49_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16400;old_locus_tag=BCEP4_220092 NZ_CAJZAV010000135.1 Protein Homology CDS 84207 85019 . + 0 ID=cds-WP_060070742.1;Parent=gene-LDO49_RS16400;Dbxref=GenBank:WP_060070742.1;Name=WP_060070742.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881291.1;locus_tag=LDO49_RS16400;product=helix-turn-helix domain-containing protein;protein_id=WP_060070742.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 85235 86047 . + . ID=gene-LDO49_RS16405;Name=LDO49_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16405;old_locus_tag=BCEP4_220093 NZ_CAJZAV010000135.1 Protein Homology CDS 85235 86047 . + 0 ID=cds-WP_060071151.1;Parent=gene-LDO49_RS16405;Dbxref=GenBank:WP_060071151.1;Name=WP_060071151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365284.1;locus_tag=LDO49_RS16405;product=hypothetical protein;protein_id=WP_060071151.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 86208 87347 . + . ID=gene-LDO49_RS16410;Name=LDO49_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16410;old_locus_tag=BCEP4_220094 NZ_CAJZAV010000135.1 Protein Homology CDS 86208 87347 . + 0 ID=cds-WP_224052032.1;Parent=gene-LDO49_RS16410;Dbxref=GenBank:WP_224052032.1;Name=WP_224052032.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013077.6;locus_tag=LDO49_RS16410;product=nitroreductase family protein;protein_id=WP_224052032.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 87344 88834 . + . ID=gene-LDO49_RS16415;Name=LDO49_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16415;old_locus_tag=BCEP4_220095 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 87344 88834 . + 0 ID=cds-WP_060070748.1;Parent=gene-LDO49_RS16415;Dbxref=GenBank:WP_060070748.1;Name=WP_060070748.1;Ontology_term=GO:0010124,GO:0047475;gbkey=CDS;go_function=phenylacetate-CoA ligase activity|0047475||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16415;product=phenylacetate--CoA ligase family protein;protein_id=WP_060070748.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 88920 89690 . + . ID=gene-LDO49_RS16420;Name=LDO49_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16420;old_locus_tag=BCEP4_220096 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 88920 89690 . + 0 ID=cds-WP_124474851.1;Parent=gene-LDO49_RS16420;Dbxref=GenBank:WP_124474851.1;Name=WP_124474851.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16420;product=hypothetical protein;protein_id=WP_124474851.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 89797 90183 . - . ID=gene-LDO49_RS16425;Name=LDO49_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16425;old_locus_tag=BCEP4_220097 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 89797 90183 . - 0 ID=cds-WP_124474852.1;Parent=gene-LDO49_RS16425;Dbxref=GenBank:WP_124474852.1;Name=WP_124474852.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16425;product=hypothetical protein;protein_id=WP_124474852.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 90200 91108 . - . ID=gene-LDO49_RS16430;Name=LDO49_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16430;old_locus_tag=BCEP4_220098 NZ_CAJZAV010000135.1 Protein Homology CDS 90200 91108 . - 0 ID=cds-WP_060070752.1;Parent=gene-LDO49_RS16430;Dbxref=GenBank:WP_060070752.1;Name=WP_060070752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414951.1;locus_tag=LDO49_RS16430;product=5'-nucleotidase;protein_id=WP_060070752.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 91556 92416 . + . ID=gene-LDO49_RS16435;Name=LDO49_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16435;old_locus_tag=BCEP4_220099 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 91556 92416 . + 0 ID=cds-WP_063802661.1;Parent=gene-LDO49_RS16435;Dbxref=GenBank:WP_063802661.1;Name=WP_063802661.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16435;product=hypothetical protein;protein_id=WP_063802661.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 92424 93908 . + . ID=gene-LDO49_RS16440;Name=LDO49_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16440;old_locus_tag=BCEP4_220100 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 92424 93908 . + 0 ID=cds-WP_196486193.1;Parent=gene-LDO49_RS16440;Dbxref=GenBank:WP_196486193.1;Name=WP_196486193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16440;product=hypothetical protein;protein_id=WP_196486193.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 93941 94105 . + . ID=gene-LDO49_RS16445;Name=LDO49_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16445;old_locus_tag=BCEP4_220101 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 93941 94105 . + 0 ID=cds-WP_155627568.1;Parent=gene-LDO49_RS16445;Dbxref=GenBank:WP_155627568.1;Name=WP_155627568.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16445;product=hypothetical protein;protein_id=WP_155627568.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 94226 95116 . + . ID=gene-LDO49_RS16450;Name=LDO49_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16450;old_locus_tag=BCEP4_220102 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 94226 95116 . + 0 ID=cds-WP_224052033.1;Parent=gene-LDO49_RS16450;Dbxref=GenBank:WP_224052033.1;Name=WP_224052033.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16450;product=YaaW family protein;protein_id=WP_224052033.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 95209 96300 . - . ID=gene-LDO49_RS16455;Name=LDO49_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16455;old_locus_tag=BCEP4_220103 NZ_CAJZAV010000135.1 Protein Homology CDS 95209 96300 . - 0 ID=cds-WP_060070757.1;Parent=gene-LDO49_RS16455;Dbxref=GenBank:WP_060070757.1;Name=WP_060070757.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016346202.1;locus_tag=LDO49_RS16455;product=helix-turn-helix transcriptional regulator;protein_id=WP_060070757.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 96710 96889 . + . ID=gene-LDO49_RS16460;Name=LDO49_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16460;old_locus_tag=BCEP4_220105 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 96710 96889 . + 0 ID=cds-WP_027789791.1;Parent=gene-LDO49_RS16460;Dbxref=GenBank:WP_027789791.1;Name=WP_027789791.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16460;product=hypothetical protein;protein_id=WP_027789791.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 96902 97324 . + . ID=gene-LDO49_RS16465;Name=LDO49_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16465;old_locus_tag=BCEP4_220106 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 96902 97324 . + 0 ID=cds-WP_059488846.1;Parent=gene-LDO49_RS16465;Dbxref=GenBank:WP_059488846.1;Name=WP_059488846.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16465;product=hypothetical protein;protein_id=WP_059488846.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 97651 98871 . + . ID=gene-LDO49_RS16470;Name=LDO49_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16470;old_locus_tag=BCEP4_220107 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 97651 98871 . + 0 ID=cds-WP_060070762.1;Parent=gene-LDO49_RS16470;Dbxref=GenBank:WP_060070762.1;Name=WP_060070762.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16470;product=hypothetical protein;protein_id=WP_060070762.1;transl_table=11 NZ_CAJZAV010000135.1 cmsearch riboswitch 99448 99551 . + . ID=id-NZ_CAJZAV010000135.1:99448..99551;Dbxref=RFAM:RF01725;Note=SAM-I-IV-variant riboswitch%3B SAM riboswitches modulate the expression of downstream genes in response to levels of S-adenosylmethionine;bound_moiety=S-adenosylmethionine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAV010000135.1 RefSeq gene 99594 99932 . + . ID=gene-LDO49_RS16475;Name=LDO49_RS16475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16475;old_locus_tag=BCEP4_220109 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 99594 99932 . + 0 ID=cds-WP_148668956.1;Parent=gene-LDO49_RS16475;Dbxref=GenBank:WP_148668956.1;Name=WP_148668956.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16475;product=hypothetical protein;protein_id=WP_148668956.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 100290 102119 . - . ID=gene-LDO49_RS16480;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LDO49_RS16480;old_locus_tag=BCEP4_220110 NZ_CAJZAV010000135.1 Protein Homology CDS 100290 102119 . - 0 ID=cds-WP_059687513.1;Parent=gene-LDO49_RS16480;Dbxref=GenBank:WP_059687513.1;Name=WP_059687513.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330587.1;locus_tag=LDO49_RS16480;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_059687513.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 102276 102767 . + . ID=gene-LDO49_RS16485;Name=LDO49_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16485;old_locus_tag=BCEP4_220111 NZ_CAJZAV010000135.1 Protein Homology CDS 102276 102767 . + 0 ID=cds-WP_021160045.1;Parent=gene-LDO49_RS16485;Dbxref=GenBank:WP_021160045.1;Name=WP_021160045.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900377.1;locus_tag=LDO49_RS16485;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_021160045.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 102815 103672 . - . ID=gene-LDO49_RS16490;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=LDO49_RS16490;old_locus_tag=BCEP4_220112 NZ_CAJZAV010000135.1 Protein Homology CDS 102815 103672 . - 0 ID=cds-WP_059654107.1;Parent=gene-LDO49_RS16490;Dbxref=GenBank:WP_059654107.1;Name=WP_059654107.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356313.1;locus_tag=LDO49_RS16490;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_059654107.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 103750 104568 . + . ID=gene-LDO49_RS16495;Name=LDO49_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16495;old_locus_tag=BCEP4_220113 NZ_CAJZAV010000135.1 Protein Homology CDS 103750 104568 . + 0 ID=cds-WP_021160047.1;Parent=gene-LDO49_RS16495;Dbxref=GenBank:WP_021160047.1;Name=WP_021160047.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761027.1;locus_tag=LDO49_RS16495;product=AraC family transcriptional regulator;protein_id=WP_021160047.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 104588 105121 . - . ID=gene-LDO49_RS16500;Name=LDO49_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16500;old_locus_tag=BCEP4_220114 NZ_CAJZAV010000135.1 Protein Homology CDS 104588 105121 . - 0 ID=cds-WP_224052034.1;Parent=gene-LDO49_RS16500;Dbxref=GenBank:WP_224052034.1;Name=WP_224052034.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495779.1;locus_tag=LDO49_RS16500;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_224052034.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 105560 106852 . + . ID=gene-LDO49_RS16505;Name=LDO49_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16505;old_locus_tag=BCEP4_220115 NZ_CAJZAV010000135.1 Protein Homology CDS 105560 106852 . + 0 ID=cds-WP_059589565.1;Parent=gene-LDO49_RS16505;Dbxref=GenBank:WP_059589565.1;Name=WP_059589565.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749560.1;locus_tag=LDO49_RS16505;product=MFS transporter;protein_id=WP_059589565.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 106962 108065 . - . ID=gene-LDO49_RS16510;Name=LDO49_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16510;old_locus_tag=BCEP4_220116 NZ_CAJZAV010000135.1 Protein Homology CDS 106962 108065 . - 0 ID=cds-WP_048024481.1;Parent=gene-LDO49_RS16510;Dbxref=GenBank:WP_048024481.1;Name=WP_048024481.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484546.1;locus_tag=LDO49_RS16510;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_048024481.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 108148 108984 . + . ID=gene-LDO49_RS16515;Name=LDO49_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16515;old_locus_tag=BCEP4_220117 NZ_CAJZAV010000135.1 Protein Homology CDS 108148 108984 . + 0 ID=cds-WP_021160051.1;Parent=gene-LDO49_RS16515;Dbxref=GenBank:WP_021160051.1;Name=WP_021160051.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495775.1;locus_tag=LDO49_RS16515;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_021160051.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 109013 109333 . - . ID=gene-LDO49_RS16520;Name=LDO49_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16520;old_locus_tag=BCEP4_220118 NZ_CAJZAV010000135.1 Protein Homology CDS 109013 109333 . - 0 ID=cds-WP_048024479.1;Parent=gene-LDO49_RS16520;Dbxref=GenBank:WP_048024479.1;Name=WP_048024479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724414.1;locus_tag=LDO49_RS16520;product=DUF1330 domain-containing protein;protein_id=WP_048024479.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 109546 110244 . - . ID=gene-LDO49_RS16525;Name=LDO49_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16525;old_locus_tag=BCEP4_220120 NZ_CAJZAV010000135.1 Protein Homology CDS 109546 110244 . - 0 ID=cds-WP_175850763.1;Parent=gene-LDO49_RS16525;Dbxref=GenBank:WP_175850763.1;Name=WP_175850763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484558.1;locus_tag=LDO49_RS16525;product=hypothetical protein;protein_id=WP_175850763.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 110348 110812 . - . ID=gene-LDO49_RS16530;Name=LDO49_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16530;old_locus_tag=BCEP4_220121 NZ_CAJZAV010000135.1 Protein Homology CDS 110348 110812 . - 0 ID=cds-WP_060054385.1;Parent=gene-LDO49_RS16530;Dbxref=GenBank:WP_060054385.1;Name=WP_060054385.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484623.1;locus_tag=LDO49_RS16530;product=MerR family transcriptional regulator;protein_id=WP_060054385.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 110892 112136 . + . ID=gene-LDO49_RS16535;Name=LDO49_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16535;old_locus_tag=BCEP4_220122 NZ_CAJZAV010000135.1 Protein Homology CDS 110892 112136 . + 0 ID=cds-WP_060070780.1;Parent=gene-LDO49_RS16535;Dbxref=GenBank:WP_060070780.1;Name=WP_060070780.1;Ontology_term=GO:0010181,GO:0036382;gbkey=CDS;go_function=FMN binding|0010181||IEA,flavin reductase (NADH) activity|0036382||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479813.1;locus_tag=LDO49_RS16535;product=NADH:flavin oxidoreductase/NADH oxidase family protein;protein_id=WP_060070780.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 112179 114296 . - . ID=gene-LDO49_RS16540;Name=LDO49_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16540;old_locus_tag=BCEP4_220123 NZ_CAJZAV010000135.1 Protein Homology CDS 112179 114296 . - 0 ID=cds-WP_224052035.1;Parent=gene-LDO49_RS16540;Dbxref=GenBank:WP_224052035.1;Name=WP_224052035.1;Ontology_term=GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338786.1;locus_tag=LDO49_RS16540;product=TonB-dependent receptor;protein_id=WP_224052035.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 114347 116458 . - . ID=gene-LDO49_RS16545;Name=LDO49_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16545;old_locus_tag=BCEP4_220124 NZ_CAJZAV010000135.1 Protein Homology CDS 114347 116458 . - 0 ID=cds-WP_124474855.1;Parent=gene-LDO49_RS16545;Dbxref=GenBank:WP_124474855.1;Name=WP_124474855.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356295.1;locus_tag=LDO49_RS16545;product=TonB-dependent receptor family protein;protein_id=WP_124474855.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 116632 117057 . - . ID=gene-LDO49_RS16550;Name=LDO49_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16550;old_locus_tag=BCEP4_220125 NZ_CAJZAV010000135.1 Protein Homology CDS 116632 117057 . - 0 ID=cds-WP_060070786.1;Parent=gene-LDO49_RS16550;Dbxref=GenBank:WP_060070786.1;Name=WP_060070786.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022610.6;locus_tag=LDO49_RS16550;product=DUF2946 domain-containing protein;protein_id=WP_060070786.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 117035 118504 . - . ID=gene-LDO49_RS16555;Name=LDO49_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16555;old_locus_tag=BCEP4_220126 NZ_CAJZAV010000135.1 Protein Homology CDS 117035 118504 . - 0 ID=cds-WP_060070789.1;Parent=gene-LDO49_RS16555;Dbxref=GenBank:WP_060070789.1;Name=WP_060070789.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338785.1;locus_tag=LDO49_RS16555;product=PepSY-associated TM helix domain-containing protein;protein_id=WP_060070789.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 118747 119232 . - . ID=gene-LDO49_RS16560;Name=LDO49_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16560;old_locus_tag=BCEP4_220127 NZ_CAJZAV010000135.1 Protein Homology CDS 118747 119232 . - 0 ID=cds-WP_059676909.1;Parent=gene-LDO49_RS16560;Dbxref=GenBank:WP_059676909.1;Name=WP_059676909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694508.1;locus_tag=LDO49_RS16560;product=hypothetical protein;protein_id=WP_059676909.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 119338 119883 . - . ID=gene-LDO49_RS16565;Name=LDO49_RS16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16565;old_locus_tag=BCEP4_220128 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 119338 119883 . - 0 ID=cds-WP_027789773.1;Parent=gene-LDO49_RS16565;Dbxref=GenBank:WP_027789773.1;Name=WP_027789773.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16565;product=hypothetical protein;protein_id=WP_027789773.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 119880 120113 . - . ID=gene-LDO49_RS16570;Name=LDO49_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16570;old_locus_tag=BCEP4_220129 NZ_CAJZAV010000135.1 Protein Homology CDS 119880 120113 . - 0 ID=cds-WP_059494420.1;Parent=gene-LDO49_RS16570;Dbxref=GenBank:WP_059494420.1;Name=WP_059494420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356290.1;locus_tag=LDO49_RS16570;product=hypothetical protein;protein_id=WP_059494420.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 120202 120525 . - . ID=gene-LDO49_RS16575;Name=LDO49_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16575;old_locus_tag=BCEP4_220130 NZ_CAJZAV010000135.1 Protein Homology CDS 120202 120525 . - 0 ID=cds-WP_021162626.1;Parent=gene-LDO49_RS16575;Dbxref=GenBank:WP_021162626.1;Name=WP_021162626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356289.1;locus_tag=LDO49_RS16575;product=hypothetical protein;protein_id=WP_021162626.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 120674 120823 . + . ID=gene-LDO49_RS16580;Name=LDO49_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16580 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 120674 120823 . + 0 ID=cds-WP_185633901.1;Parent=gene-LDO49_RS16580;Dbxref=GenBank:WP_185633901.1;Name=WP_185633901.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16580;product=hypothetical protein;protein_id=WP_185633901.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 121120 121752 . + . ID=gene-LDO49_RS16585;Name=LDO49_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16585;old_locus_tag=BCEP4_220131 NZ_CAJZAV010000135.1 Protein Homology CDS 121120 121752 . + 0 ID=cds-WP_048021593.1;Parent=gene-LDO49_RS16585;Dbxref=GenBank:WP_048021593.1;Name=WP_048021593.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900368.1;locus_tag=LDO49_RS16585;product=LysE family translocator;protein_id=WP_048021593.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 121832 123460 . - . ID=gene-LDO49_RS16590;Name=LDO49_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16590;old_locus_tag=BCEP4_220132 NZ_CAJZAV010000135.1 Protein Homology CDS 121832 123460 . - 0 ID=cds-WP_048021595.1;Parent=gene-LDO49_RS16590;Dbxref=GenBank:WP_048021595.1;Name=WP_048021595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766794.1;locus_tag=LDO49_RS16590;product=NADP-dependent glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_048021595.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 124386 126515 . + . ID=gene-LDO49_RS16595;Name=LDO49_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16595;old_locus_tag=BCEP4_220133 NZ_CAJZAV010000135.1 Protein Homology CDS 124386 126515 . + 0 ID=cds-WP_060070792.1;Parent=gene-LDO49_RS16595;Dbxref=GenBank:WP_060070792.1;Name=WP_060070792.1;Ontology_term=GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335379.1;locus_tag=LDO49_RS16595;product=TonB-dependent receptor;protein_id=WP_060070792.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 127244 130057 . + . ID=gene-LDO49_RS16600;Name=LDO49_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16600;old_locus_tag=BCEP4_220134 NZ_CAJZAV010000135.1 Protein Homology CDS 127244 130057 . + 0 ID=cds-WP_081067208.1;Parent=gene-LDO49_RS16600;Dbxref=GenBank:WP_081067208.1;Name=WP_081067208.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:TIGR03361.1;locus_tag=LDO49_RS16600;product=type VI secretion system Vgr family protein;protein_id=WP_081067208.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 130070 131323 . + . ID=gene-LDO49_RS16605;Name=LDO49_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16605;old_locus_tag=BCEP4_220135 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 130070 131323 . + 0 ID=cds-WP_048021600.1;Parent=gene-LDO49_RS16605;Dbxref=GenBank:WP_048021600.1;Name=WP_048021600.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16605;product=hypothetical protein;protein_id=WP_048021600.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 131361 131795 . + . ID=gene-LDO49_RS16610;Name=LDO49_RS16610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16610;old_locus_tag=BCEP4_220136 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 131361 131795 . + 0 ID=cds-WP_224052036.1;Parent=gene-LDO49_RS16610;Dbxref=GenBank:WP_224052036.1;Name=WP_224052036.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16610;product=hypothetical protein;protein_id=WP_224052036.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 131885 132832 . - . ID=gene-LDO49_RS16615;Name=LDO49_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16615;old_locus_tag=BCEP4_220137 NZ_CAJZAV010000135.1 Protein Homology CDS 131885 132832 . - 0 ID=cds-WP_060070795.1;Parent=gene-LDO49_RS16615;Dbxref=GenBank:WP_060070795.1;Name=WP_060070795.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330573.1;locus_tag=LDO49_RS16615;product=LysR family transcriptional regulator;protein_id=WP_060070795.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 133059 134087 . + . ID=gene-LDO49_RS16620;Name=LDO49_RS16620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16620;old_locus_tag=BCEP4_220138 NZ_CAJZAV010000135.1 Protein Homology CDS 133059 134087 . + 0 ID=cds-WP_059488881.1;Parent=gene-LDO49_RS16620;Dbxref=GenBank:WP_059488881.1;Name=WP_059488881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330572.1;locus_tag=LDO49_RS16620;product=DUF1338 domain-containing protein;protein_id=WP_059488881.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 134459 134656 . - . ID=gene-LDO49_RS16625;Name=LDO49_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16625;old_locus_tag=BCEP4_220140 NZ_CAJZAV010000135.1 Protein Homology CDS 134459 134656 . - 0 ID=cds-WP_021162617.1;Parent=gene-LDO49_RS16625;Dbxref=GenBank:WP_021162617.1;Name=WP_021162617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397770.1;locus_tag=LDO49_RS16625;product=CsbD family protein;protein_id=WP_021162617.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 134713 135063 . - . ID=gene-LDO49_RS16630;Name=LDO49_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16630;old_locus_tag=BCEP4_220141 NZ_CAJZAV010000135.1 Protein Homology CDS 134713 135063 . - 0 ID=cds-WP_224052037.1;Parent=gene-LDO49_RS16630;Dbxref=GenBank:WP_224052037.1;Name=WP_224052037.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749572.1;locus_tag=LDO49_RS16630;product=BON domain-containing protein;protein_id=WP_224052037.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 135146 135310 . - . ID=gene-LDO49_RS16635;Name=LDO49_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16635;old_locus_tag=BCEP4_220142 NZ_CAJZAV010000135.1 Protein Homology CDS 135146 135310 . - 0 ID=cds-WP_021162615.1;Parent=gene-LDO49_RS16635;Dbxref=GenBank:WP_021162615.1;Name=WP_021162615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484627.1;locus_tag=LDO49_RS16635;product=hypothetical protein;protein_id=WP_021162615.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 135682 137214 . + . ID=gene-LDO49_RS16640;Name=LDO49_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16640;old_locus_tag=BCEP4_220143 NZ_CAJZAV010000135.1 Protein Homology CDS 135682 137214 . + 0 ID=cds-WP_021162613.1;Parent=gene-LDO49_RS16640;Dbxref=GenBank:WP_021162613.1;Name=WP_021162613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479801.1;locus_tag=LDO49_RS16640;product=PAS domain S-box protein;protein_id=WP_021162613.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 137355 137546 . + . ID=gene-LDO49_RS16645;Name=LDO49_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16645;old_locus_tag=BCEP4_220144 NZ_CAJZAV010000135.1 Protein Homology CDS 137355 137546 . + 0 ID=cds-WP_021162612.1;Parent=gene-LDO49_RS16645;Dbxref=GenBank:WP_021162612.1;Name=WP_021162612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694517.1;locus_tag=LDO49_RS16645;product=CsbD family protein;protein_id=WP_021162612.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 137963 139114 . + . ID=gene-LDO49_RS16650;Name=LDO49_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16650;old_locus_tag=BCEP4_220146 NZ_CAJZAV010000135.1 Protein Homology CDS 137963 139114 . + 0 ID=cds-WP_021162611.1;Parent=gene-LDO49_RS16650;Dbxref=GenBank:WP_021162611.1;Name=WP_021162611.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217652.1;locus_tag=LDO49_RS16650;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_021162611.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 139310 140482 . + . ID=gene-LDO49_RS16655;Name=LDO49_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16655;old_locus_tag=BCEP4_220147 NZ_CAJZAV010000135.1 Protein Homology CDS 139310 140482 . + 0 ID=cds-WP_048021606.1;Parent=gene-LDO49_RS16655;Dbxref=GenBank:WP_048021606.1;Name=WP_048021606.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356268.1;locus_tag=LDO49_RS16655;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_048021606.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 140574 141755 . - . ID=gene-LDO49_RS16660;Name=LDO49_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16660;old_locus_tag=BCEP4_220149 NZ_CAJZAV010000135.1 Protein Homology CDS 140574 141755 . - 0 ID=cds-WP_059589331.1;Parent=gene-LDO49_RS16660;Dbxref=GenBank:WP_059589331.1;Name=WP_059589331.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356267.1;locus_tag=LDO49_RS16660;product=serine hydrolase domain-containing protein;protein_id=WP_059589331.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 142091 143218 . + . ID=gene-LDO49_RS16665;Name=LDO49_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16665;old_locus_tag=BCEP4_220150 NZ_CAJZAV010000135.1 Protein Homology CDS 142091 143218 . + 0 ID=cds-WP_042972847.1;Parent=gene-LDO49_RS16665;Dbxref=GenBank:WP_042972847.1;Name=WP_042972847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479795.1;locus_tag=LDO49_RS16665;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_042972847.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 143397 143807 . + . ID=gene-LDO49_RS16670;Name=LDO49_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16670;old_locus_tag=BCEP4_220151 NZ_CAJZAV010000135.1 Protein Homology CDS 143397 143807 . + 0 ID=cds-WP_048021611.1;Parent=gene-LDO49_RS16670;Dbxref=GenBank:WP_048021611.1;Name=WP_048021611.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338758.1;locus_tag=LDO49_RS16670;product=GNAT family N-acetyltransferase;protein_id=WP_048021611.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 143868 144212 . + . ID=gene-LDO49_RS16675;Name=LDO49_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16675 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 143868 144212 . + 0 ID=cds-WP_124474857.1;Parent=gene-LDO49_RS16675;Dbxref=GenBank:WP_124474857.1;Name=WP_124474857.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16675;product=hypothetical protein;protein_id=WP_124474857.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 144791 145426 . - . ID=gene-LDO49_RS16685;Name=LDO49_RS16685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16685;old_locus_tag=BCEP4_220152 NZ_CAJZAV010000135.1 Protein Homology CDS 144791 145426 . - 0 ID=cds-WP_059676708.1;Parent=gene-LDO49_RS16685;Dbxref=GenBank:WP_059676708.1;Name=WP_059676708.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877986.1;locus_tag=LDO49_RS16685;product=glutathione S-transferase family protein;protein_id=WP_059676708.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 145596 145904 . + . ID=gene-LDO49_RS16690;Name=LDO49_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16690;old_locus_tag=BCEP4_220154 NZ_CAJZAV010000135.1 Protein Homology CDS 145596 145904 . + 0 ID=cds-WP_051392129.1;Parent=gene-LDO49_RS16690;Dbxref=GenBank:WP_051392129.1;Name=WP_051392129.1;Ontology_term=GO:0006633,GO:0009245,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: protein motif:HMM:NF012759.6;locus_tag=LDO49_RS16690;product=acyl carrier protein;protein_id=WP_051392129.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 145901 146416 . + . ID=gene-LDO49_RS16695;Name=LDO49_RS16695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16695;old_locus_tag=BCEP4_220153 NZ_CAJZAV010000135.1 Protein Homology CDS 145901 146416 . + 0 ID=cds-WP_059709908.1;Parent=gene-LDO49_RS16695;Dbxref=GenBank:WP_059709908.1;Name=WP_059709908.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877985.1;locus_tag=LDO49_RS16695;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_059709908.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 146884 148188 . + . ID=gene-LDO49_RS16700;Name=LDO49_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16700;old_locus_tag=BCEP4_220155 NZ_CAJZAV010000135.1 Protein Homology CDS 146884 148188 . + 0 ID=cds-WP_059589336.1;Parent=gene-LDO49_RS16700;Dbxref=GenBank:WP_059589336.1;Name=WP_059589336.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424772.1;locus_tag=LDO49_RS16700;product=MFS transporter;protein_id=WP_059589336.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 148226 148750 . + . ID=gene-LDO49_RS16705;Name=LDO49_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16705;old_locus_tag=BCEP4_220156 NZ_CAJZAV010000135.1 Protein Homology CDS 148226 148750 . + 0 ID=cds-WP_048021615.1;Parent=gene-LDO49_RS16705;Dbxref=GenBank:WP_048021615.1;Name=WP_048021615.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877983.1;locus_tag=LDO49_RS16705;product=flavin reductase;protein_id=WP_048021615.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 148777 149847 . + . ID=gene-LDO49_RS16710;Name=LDO49_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16710;old_locus_tag=BCEP4_220157 NZ_CAJZAV010000135.1 Protein Homology CDS 148777 149847 . + 0 ID=cds-WP_224052039.1;Parent=gene-LDO49_RS16710;Dbxref=GenBank:WP_224052039.1;Name=WP_224052039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877982.1;locus_tag=LDO49_RS16710;product=DUF6421 family protein;protein_id=WP_224052039.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 149899 151740 . + . ID=gene-LDO49_RS16715;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=LDO49_RS16715;old_locus_tag=BCEP4_220158 NZ_CAJZAV010000135.1 Protein Homology CDS 149899 151740 . + 0 ID=cds-WP_021156684.1;Parent=gene-LDO49_RS16715;Dbxref=GenBank:WP_021156684.1;Name=WP_021156684.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: protein motif:HMM:NF009103.0;locus_tag=LDO49_RS16715;product=dihydroxy-acid dehydratase;protein_id=WP_021156684.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 151743 152933 . + . ID=gene-LDO49_RS16720;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=LDO49_RS16720;old_locus_tag=BCEP4_220159 NZ_CAJZAV010000135.1 Protein Homology CDS 151743 152933 . + 0 ID=cds-WP_021156685.1;Parent=gene-LDO49_RS16720;Dbxref=GenBank:WP_021156685.1;Name=WP_021156685.1;Ontology_term=GO:0009086,GO:0047804;gbkey=CDS;gene=metC;go_function=cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877980.1;locus_tag=LDO49_RS16720;product=cystathionine beta-lyase;protein_id=WP_021156685.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 153002 154318 . + . ID=gene-LDO49_RS16725;Name=LDO49_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16725;old_locus_tag=BCEP4_220160 NZ_CAJZAV010000135.1 Protein Homology CDS 153002 154318 . + 0 ID=cds-WP_060070799.1;Parent=gene-LDO49_RS16725;Dbxref=GenBank:WP_060070799.1;Name=WP_060070799.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877979.1;locus_tag=LDO49_RS16725;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_060070799.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 154385 156016 . + . ID=gene-LDO49_RS16730;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=LDO49_RS16730;old_locus_tag=BCEP4_220161 NZ_CAJZAV010000135.1 Protein Homology CDS 154385 156016 . + 0 ID=cds-WP_224052077.1;Parent=gene-LDO49_RS16730;Dbxref=GenBank:WP_224052077.1;Name=WP_224052077.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012079023.1;locus_tag=LDO49_RS16730;product=glutamate--cysteine ligase;protein_id=WP_224052077.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 156056 157246 . + . ID=gene-LDO49_RS16735;Name=LDO49_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16735;old_locus_tag=BCEP4_220162 NZ_CAJZAV010000135.1 Protein Homology CDS 156056 157246 . + 0 ID=cds-WP_059589341.1;Parent=gene-LDO49_RS16735;Dbxref=GenBank:WP_059589341.1;Name=WP_059589341.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877977.1;locus_tag=LDO49_RS16735;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_059589341.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 157306 158466 . + . ID=gene-LDO49_RS16740;Name=LDO49_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16740;old_locus_tag=BCEP4_220163 NZ_CAJZAV010000135.1 Protein Homology CDS 157306 158466 . + 0 ID=cds-WP_224052041.1;Parent=gene-LDO49_RS16740;Dbxref=GenBank:WP_224052041.1;Name=WP_224052041.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424846.1;locus_tag=LDO49_RS16740;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=WP_224052041.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 158596 159507 . - . ID=gene-LDO49_RS16745;Name=LDO49_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16745;old_locus_tag=BCEP4_220164 NZ_CAJZAV010000135.1 Protein Homology CDS 158596 159507 . - 0 ID=cds-WP_224052042.1;Parent=gene-LDO49_RS16745;Dbxref=GenBank:WP_224052042.1;Name=WP_224052042.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333901.1;locus_tag=LDO49_RS16745;product=LysR family transcriptional regulator;protein_id=WP_224052042.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 159837 160271 . - . ID=gene-LDO49_RS16750;Name=LDO49_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16750;old_locus_tag=BCEP4_220166 NZ_CAJZAV010000135.1 Protein Homology CDS 159837 160271 . - 0 ID=cds-WP_224052043.1;Parent=gene-LDO49_RS16750;Dbxref=GenBank:WP_224052043.1;Name=WP_224052043.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF012792.6;locus_tag=LDO49_RS16750;product=GNAT family N-acetyltransferase;protein_id=WP_224052043.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 160540 161406 . + . ID=gene-LDO49_RS16755;Name=LDO49_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16755;old_locus_tag=BCEP4_220167 NZ_CAJZAV010000135.1 Protein Homology CDS 160540 161406 . + 0 ID=cds-WP_081062869.1;Parent=gene-LDO49_RS16755;Dbxref=GenBank:WP_081062869.1;Name=WP_081062869.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356262.1;locus_tag=LDO49_RS16755;product=AraC family transcriptional regulator;protein_id=WP_081062869.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 161494 162408 . + . ID=gene-LDO49_RS16760;Name=LDO49_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16760;old_locus_tag=BCEP4_220168 NZ_CAJZAV010000135.1 Protein Homology CDS 161494 162408 . + 0 ID=cds-WP_224052044.1;Parent=gene-LDO49_RS16760;Dbxref=GenBank:WP_224052044.1;Name=WP_224052044.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356261.1;locus_tag=LDO49_RS16760;product=alpha/beta hydrolase;protein_id=WP_224052044.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 163152 163526 . + . ID=gene-LDO49_RS16765;Name=LDO49_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16765;old_locus_tag=BCEP4_220169 NZ_CAJZAV010000135.1 Protein Homology CDS 163152 163526 . + 0 ID=cds-WP_021156694.1;Parent=gene-LDO49_RS16765;Dbxref=GenBank:WP_021156694.1;Name=WP_021156694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484605.1;locus_tag=LDO49_RS16765;product=VOC family protein;protein_id=WP_021156694.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 163654 163881 . + . ID=gene-LDO49_RS16770;Name=LDO49_RS16770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16770;old_locus_tag=BCEP4_220170 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 163654 163881 . + 0 ID=cds-WP_021156695.1;Parent=gene-LDO49_RS16770;Dbxref=GenBank:WP_021156695.1;Name=WP_021156695.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16770;product=hypothetical protein;protein_id=WP_021156695.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 164033 164476 . + . ID=gene-LDO49_RS16775;Name=LDO49_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16775;old_locus_tag=BCEP4_220171 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 164033 164476 . + 0 ID=cds-WP_155631512.1;Parent=gene-LDO49_RS16775;Dbxref=GenBank:WP_155631512.1;Name=WP_155631512.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16775;product=hypothetical protein;protein_id=WP_155631512.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 164714 166606 . + . ID=gene-LDO49_RS16780;Name=LDO49_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16780;old_locus_tag=BCEP4_220173 NZ_CAJZAV010000135.1 Protein Homology CDS 164714 166606 . + 0 ID=cds-WP_104765749.1;Parent=gene-LDO49_RS16780;Dbxref=GenBank:WP_104765749.1;Name=WP_104765749.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534797.1;locus_tag=LDO49_RS16780;product=SAM-dependent methyltransferase;protein_id=WP_104765749.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 166712 167389 . + . ID=gene-LDO49_RS16785;Name=LDO49_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16785;old_locus_tag=BCEP4_220174 NZ_CAJZAV010000135.1 Protein Homology CDS 166712 167389 . + 0 ID=cds-WP_021156699.1;Parent=gene-LDO49_RS16785;Dbxref=GenBank:WP_021156699.1;Name=WP_021156699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495748.1;locus_tag=LDO49_RS16785;product=hypothetical protein;protein_id=WP_021156699.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 167476 168447 . - . ID=gene-LDO49_RS16790;Name=LDO49_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16790;old_locus_tag=BCEP4_220175 NZ_CAJZAV010000135.1 Protein Homology CDS 167476 168447 . - 0 ID=cds-WP_021156700.1;Parent=gene-LDO49_RS16790;Dbxref=GenBank:WP_021156700.1;Name=WP_021156700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484599.1;locus_tag=LDO49_RS16790;product=LysR substrate-binding domain-containing protein;protein_id=WP_021156700.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 168584 170884 . + . ID=gene-LDO49_RS16795;Name=LDO49_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16795;old_locus_tag=BCEP4_220176 NZ_CAJZAV010000135.1 Protein Homology CDS 168584 170884 . + 0 ID=cds-WP_059709900.1;Parent=gene-LDO49_RS16795;Dbxref=GenBank:WP_059709900.1;Name=WP_059709900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659438.1;locus_tag=LDO49_RS16795;product=NADP-dependent malic enzyme;protein_id=WP_059709900.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 170958 171593 . - . ID=gene-LDO49_RS16800;Name=LDO49_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16800;old_locus_tag=BCEP4_220177 NZ_CAJZAV010000135.1 Protein Homology CDS 170958 171593 . - 0 ID=cds-WP_060071158.1;Parent=gene-LDO49_RS16800;Dbxref=GenBank:WP_060071158.1;Name=WP_060071158.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016450878.1;locus_tag=LDO49_RS16800;product=TetR/AcrR family transcriptional regulator;protein_id=WP_060071158.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 171693 172982 . + . ID=gene-LDO49_RS16805;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=LDO49_RS16805;old_locus_tag=BCEP4_220178 NZ_CAJZAV010000135.1 Protein Homology CDS 171693 172982 . + 0 ID=cds-WP_060070820.1;Parent=gene-LDO49_RS16805;Dbxref=GenBank:WP_060070820.1;Name=WP_060070820.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012078783.1;locus_tag=LDO49_RS16805;product=beta-ketoacyl-ACP synthase II;protein_id=WP_060070820.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 173728 174630 . + . ID=gene-LDO49_RS16810;Name=LDO49_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16810;old_locus_tag=BCEP4_220179 NZ_CAJZAV010000135.1 Protein Homology CDS 173728 174630 . + 0 ID=cds-WP_224052045.1;Parent=gene-LDO49_RS16810;Dbxref=GenBank:WP_224052045.1;Name=WP_224052045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759216.1;locus_tag=LDO49_RS16810;product=hypothetical protein;protein_id=WP_224052045.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 174671 176365 . - . ID=gene-LDO49_RS16815;Name=LDO49_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16815;old_locus_tag=BCEP4_220180 NZ_CAJZAV010000135.1 Protein Homology CDS 174671 176365 . - 0 ID=cds-WP_060070826.1;Parent=gene-LDO49_RS16815;Dbxref=GenBank:WP_060070826.1;Name=WP_060070826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900170.1;locus_tag=LDO49_RS16815;product=NfrA family protein;protein_id=WP_060070826.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 176362 178323 . - . ID=gene-LDO49_RS16820;Name=LDO49_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16820;old_locus_tag=BCEP4_220181 NZ_CAJZAV010000135.1 Protein Homology CDS 176362 178323 . - 0 ID=cds-WP_059494462.1;Parent=gene-LDO49_RS16820;Dbxref=GenBank:WP_059494462.1;Name=WP_059494462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356250.1;locus_tag=LDO49_RS16820;product=glycosyl transferase family protein;protein_id=WP_059494462.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 179020 179241 . - . ID=gene-LDO49_RS16825;Name=LDO49_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16825;old_locus_tag=BCEP4_220183 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 179020 179241 . - 0 ID=cds-WP_124474859.1;Parent=gene-LDO49_RS16825;Dbxref=GenBank:WP_124474859.1;Name=WP_124474859.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16825;product=hypothetical protein;protein_id=WP_124474859.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 179285 179590 . + . ID=gene-LDO49_RS16830;Name=LDO49_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16830;old_locus_tag=BCEP4_220185 NZ_CAJZAV010000135.1 Protein Homology CDS 179285 179590 . + 0 ID=cds-WP_081062585.1;Parent=gene-LDO49_RS16830;Dbxref=GenBank:WP_081062585.1;Name=WP_081062585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356248.1;locus_tag=LDO49_RS16830;product=hypothetical protein;protein_id=WP_081062585.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 179603 181246 . + . ID=gene-LDO49_RS16835;Name=LDO49_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16835;old_locus_tag=BCEP4_220186 NZ_CAJZAV010000135.1 Protein Homology CDS 179603 181246 . + 0 ID=cds-WP_224052046.1;Parent=gene-LDO49_RS16835;Dbxref=GenBank:WP_224052046.1;Name=WP_224052046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759221.1;locus_tag=LDO49_RS16835;product=DUF2334 domain-containing protein;protein_id=WP_224052046.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 181353 182321 . + . ID=gene-LDO49_RS16840;Name=LDO49_RS16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16840;old_locus_tag=BCEP4_220187 NZ_CAJZAV010000135.1 Protein Homology CDS 181353 182321 . + 0 ID=cds-WP_059488919.1;Parent=gene-LDO49_RS16840;Dbxref=GenBank:WP_059488919.1;Name=WP_059488919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356246.1;locus_tag=LDO49_RS16840;product=hypothetical protein;protein_id=WP_059488919.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 182642 183841 . + . ID=gene-LDO49_RS16845;Name=LDO49_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16845;old_locus_tag=BCEP4_220188 NZ_CAJZAV010000135.1 Protein Homology CDS 182642 183841 . + 0 ID=cds-WP_224052078.1;Parent=gene-LDO49_RS16845;Dbxref=GenBank:WP_224052078.1;Name=WP_224052078.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365333.1;locus_tag=LDO49_RS16845;product=aminotransferase-like domain-containing protein;protein_id=WP_224052078.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 183854 184045 . + . ID=gene-LDO49_RS16850;Name=LDO49_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16850;old_locus_tag=BCEP4_220189 NZ_CAJZAV010000135.1 Protein Homology CDS 183854 184045 . + 0 ID=cds-WP_224052047.1;Parent=gene-LDO49_RS16850;Dbxref=GenBank:WP_224052047.1;Name=WP_224052047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338753.1;locus_tag=LDO49_RS16850;product=hypothetical protein;protein_id=WP_224052047.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 184141 184737 . + . ID=gene-LDO49_RS16855;Name=LDO49_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16855;old_locus_tag=BCEP4_220190 NZ_CAJZAV010000135.1 Protein Homology CDS 184141 184737 . + 0 ID=cds-WP_224052048.1;Parent=gene-LDO49_RS16855;Dbxref=GenBank:WP_224052048.1;Name=WP_224052048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900347.1;locus_tag=LDO49_RS16855;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_224052048.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 184748 185029 . - . ID=gene-LDO49_RS16860;Name=LDO49_RS16860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16860;old_locus_tag=BCEP4_220191 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 184748 185029 . - 0 ID=cds-WP_048021649.1;Parent=gene-LDO49_RS16860;Dbxref=GenBank:WP_048021649.1;Name=WP_048021649.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16860;product=hypothetical protein;protein_id=WP_048021649.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 185056 185997 . - . ID=gene-LDO49_RS16865;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=LDO49_RS16865;old_locus_tag=BCEP4_220192 NZ_CAJZAV010000135.1 Protein Homology CDS 185056 185997 . - 0 ID=cds-WP_059488925.1;Parent=gene-LDO49_RS16865;Dbxref=GenBank:WP_059488925.1;Name=WP_059488925.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=gcvA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356241.1;locus_tag=LDO49_RS16865;product=transcriptional regulator GcvA;protein_id=WP_059488925.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 186132 186836 . + . ID=gene-LDO49_RS16870;Name=LDO49_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16870;old_locus_tag=BCEP4_220193 NZ_CAJZAV010000135.1 Protein Homology CDS 186132 186836 . + 0 ID=cds-WP_224052049.1;Parent=gene-LDO49_RS16870;Dbxref=GenBank:WP_224052049.1;Name=WP_224052049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404426.1;locus_tag=LDO49_RS16870;product=SDR family oxidoreductase;protein_id=WP_224052049.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 187040 188317 . + . ID=gene-LDO49_RS16875;Name=LDO49_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16875;old_locus_tag=BCEP4_220194 NZ_CAJZAV010000135.1 Protein Homology CDS 187040 188317 . + 0 ID=cds-WP_224052050.1;Parent=gene-LDO49_RS16875;Dbxref=GenBank:WP_224052050.1;Name=WP_224052050.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338749.1;locus_tag=LDO49_RS16875;product=epoxide hydrolase family protein;protein_id=WP_224052050.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 188729 189538 . + . ID=gene-LDO49_RS16880;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=LDO49_RS16880;old_locus_tag=BCEP4_220195 NZ_CAJZAV010000135.1 Protein Homology CDS 188729 189538 . + 0 ID=cds-WP_021156720.1;Parent=gene-LDO49_RS16880;Dbxref=GenBank:WP_021156720.1;Name=WP_021156720.1;Ontology_term=GO:0006633,GO:0004318;gbkey=CDS;gene=fabI;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356227.1;locus_tag=LDO49_RS16880;product=enoyl-ACP reductase FabI;protein_id=WP_021156720.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 189607 191955 . + . ID=gene-LDO49_RS16885;Name=LDO49_RS16885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16885;old_locus_tag=BCEP4_220196 NZ_CAJZAV010000135.1 Protein Homology CDS 189607 191955 . + 0 ID=cds-WP_224052051.1;Parent=gene-LDO49_RS16885;Dbxref=GenBank:WP_224052051.1;Name=WP_224052051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356226.1;locus_tag=LDO49_RS16885;product=DUF3141 domain-containing protein;protein_id=WP_224052051.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 191975 192913 . + . ID=gene-LDO49_RS16890;Name=LDO49_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16890;old_locus_tag=BCEP4_220197 NZ_CAJZAV010000135.1 Protein Homology CDS 191975 192913 . + 0 ID=cds-WP_224052052.1;Parent=gene-LDO49_RS16890;Dbxref=GenBank:WP_224052052.1;Name=WP_224052052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012352673.1;locus_tag=LDO49_RS16890;product=phosphate acetyltransferase;protein_id=WP_224052052.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 192918 194096 . + . ID=gene-LDO49_RS16895;Name=LDO49_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16895;old_locus_tag=BCEP4_220198 NZ_CAJZAV010000135.1 Protein Homology CDS 192918 194096 . + 0 ID=cds-WP_048021656.1;Parent=gene-LDO49_RS16895;Dbxref=GenBank:WP_048021656.1;Name=WP_048021656.1;Ontology_term=GO:0006082,GO:0016310,GO:0000287,GO:0005524,GO:0016301,GO:0016774;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C carboxyl group as acceptor|0016774||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356224.1;locus_tag=LDO49_RS16895;product=acetate/propionate family kinase;protein_id=WP_048021656.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 194121 194375 . + . ID=gene-LDO49_RS16900;Name=LDO49_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16900;old_locus_tag=BCEP4_220199 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 194121 194375 . + 0 ID=cds-WP_021156724.1;Parent=gene-LDO49_RS16900;Dbxref=GenBank:WP_021156724.1;Name=WP_021156724.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16900;product=hypothetical protein;protein_id=WP_021156724.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 194496 194900 . - . ID=gene-LDO49_RS16905;Name=LDO49_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16905;old_locus_tag=BCEP4_220200 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 194496 194900 . - 0 ID=cds-WP_224052053.1;Parent=gene-LDO49_RS16905;Dbxref=GenBank:WP_224052053.1;Name=WP_224052053.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16905;product=hypothetical protein;protein_id=WP_224052053.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 195240 196283 . + . ID=gene-LDO49_RS16910;Name=LDO49_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16910;old_locus_tag=BCEP4_220201 NZ_CAJZAV010000135.1 Protein Homology CDS 195240 196283 . + 0 ID=cds-WP_059488935.1;Parent=gene-LDO49_RS16910;Dbxref=GenBank:WP_059488935.1;Name=WP_059488935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900344.1;locus_tag=LDO49_RS16910;product=alpha/beta fold hydrolase;protein_id=WP_059488935.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 196283 196828 . + . ID=gene-LDO49_RS16915;Name=LDO49_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16915;old_locus_tag=BCEP4_220202 NZ_CAJZAV010000135.1 Protein Homology CDS 196283 196828 . + 0 ID=cds-WP_059624139.1;Parent=gene-LDO49_RS16915;Dbxref=GenBank:WP_059624139.1;Name=WP_059624139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757012.1;locus_tag=LDO49_RS16915;product=cytochrome P460 family protein;protein_id=WP_059624139.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 197473 197799 . + . ID=gene-LDO49_RS16920;Name=LDO49_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16920;old_locus_tag=BCEP4_220203 NZ_CAJZAV010000135.1 Protein Homology CDS 197473 197799 . + 0 ID=cds-WP_224052055.1;Parent=gene-LDO49_RS16920;Dbxref=GenBank:WP_224052055.1;Name=WP_224052055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479766.1;locus_tag=LDO49_RS16920;product=DUF4148 domain-containing protein;protein_id=WP_224052055.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 197898 198689 . + . ID=gene-LDO49_RS16925;Name=LDO49_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16925;old_locus_tag=BCEP4_220204 NZ_CAJZAV010000135.1 Protein Homology CDS 197898 198689 . + 0 ID=cds-WP_224052056.1;Parent=gene-LDO49_RS16925;Dbxref=GenBank:WP_224052056.1;Name=WP_224052056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484617.1;locus_tag=LDO49_RS16925;product=alpha/beta fold hydrolase;protein_id=WP_224052056.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 198766 200166 . + . ID=gene-LDO49_RS16930;Name=LDO49_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16930;old_locus_tag=BCEP4_220205 NZ_CAJZAV010000135.1 Protein Homology CDS 198766 200166 . + 0 ID=cds-WP_224052057.1;Parent=gene-LDO49_RS16930;Dbxref=GenBank:WP_224052057.1;Name=WP_224052057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356218.1;locus_tag=LDO49_RS16930;product=amidase family protein;protein_id=WP_224052057.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 200589 201059 . + . ID=gene-LDO49_RS16935;Name=LDO49_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16935;old_locus_tag=BCEP4_220207 NZ_CAJZAV010000135.1 Protein Homology CDS 200589 201059 . + 0 ID=cds-WP_224052059.1;Parent=gene-LDO49_RS16935;Dbxref=GenBank:WP_224052059.1;Name=WP_224052059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495730.1;locus_tag=LDO49_RS16935;product=rhodanese-like domain-containing protein;protein_id=WP_224052059.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 201088 202026 . + . ID=gene-LDO49_RS16940;Name=epsC;gbkey=Gene;gene=epsC;gene_biotype=protein_coding;locus_tag=LDO49_RS16940;old_locus_tag=BCEP4_220208 NZ_CAJZAV010000135.1 Protein Homology CDS 201088 202026 . + 0 ID=cds-WP_069254189.1;Parent=gene-LDO49_RS16940;Dbxref=GenBank:WP_069254189.1;Name=WP_069254189.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=epsC;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694557.1;locus_tag=LDO49_RS16940;product=serine O-acetyltransferase EpsC;protein_id=WP_069254189.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 202035 202256 . + . ID=gene-LDO49_RS16945;Name=LDO49_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16945;old_locus_tag=BCEP4_220209 NZ_CAJZAV010000135.1 Protein Homology CDS 202035 202256 . + 0 ID=cds-WP_021156738.1;Parent=gene-LDO49_RS16945;Dbxref=GenBank:WP_021156738.1;Name=WP_021156738.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356215.1;locus_tag=LDO49_RS16945;product=helix-turn-helix domain-containing protein;protein_id=WP_021156738.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 202395 203327 . + . ID=gene-LDO49_RS16950;Name=LDO49_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16950;old_locus_tag=BCEP4_220210 NZ_CAJZAV010000135.1 Protein Homology CDS 202395 203327 . + 0 ID=cds-WP_027790729.1;Parent=gene-LDO49_RS16950;Dbxref=GenBank:WP_027790729.1;Name=WP_027790729.1;Ontology_term=GO:0140737;gbkey=CDS;go_component=encapsulin nanocompartment|0140737||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006157090.1;locus_tag=LDO49_RS16950;product=family 2A encapsulin nanocompartment shell protein;protein_id=WP_027790729.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 203302 205302 . + . ID=gene-LDO49_RS16955;Name=LDO49_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16955;old_locus_tag=BCEP4_220211 NZ_CAJZAV010000135.1 Protein Homology CDS 203302 205302 . + 0 ID=cds-WP_224052060.1;Parent=gene-LDO49_RS16955;Dbxref=GenBank:WP_224052060.1;Name=WP_224052060.1;Ontology_term=GO:0140737;gbkey=CDS;go_component=encapsulin nanocompartment|0140737||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338738.1;locus_tag=LDO49_RS16955;product=family 2A encapsulin nanocompartment cargo protein cysteine desulfurase;protein_id=WP_224052060.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 205407 205730 . + . ID=gene-LDO49_RS16960;Name=LDO49_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16960;old_locus_tag=BCEP4_220212 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 205407 205730 . + 0 ID=cds-WP_224052062.1;Parent=gene-LDO49_RS16960;Dbxref=GenBank:WP_224052062.1;Name=WP_224052062.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS16960;product=hypothetical protein;protein_id=WP_224052062.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 205822 207642 . + . ID=gene-LDO49_RS37310;Name=LDO49_RS37310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37310;old_locus_tag=BCEP4_220213 NZ_CAJZAV010000135.1 Protein Homology CDS 205822 207642 . + 0 ID=cds-WP_290369858.1;Parent=gene-LDO49_RS37310;Dbxref=GenBank:WP_290369858.1;Name=WP_290369858.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777904.1;locus_tag=LDO49_RS37310;product=methyl-accepting chemotaxis protein;protein_id=WP_290369858.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 208012 209160 . + . ID=gene-LDO49_RS16975;Name=LDO49_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16975;old_locus_tag=BCEP4_220215 NZ_CAJZAV010000135.1 Protein Homology CDS 208012 209160 . + 0 ID=cds-WP_059676730.1;Parent=gene-LDO49_RS16975;Dbxref=GenBank:WP_059676730.1;Name=WP_059676730.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900333.1;locus_tag=LDO49_RS16975;product=porin;protein_id=WP_059676730.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 209202 210095 . - . ID=gene-LDO49_RS16980;Name=LDO49_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16980;old_locus_tag=BCEP4_220216 NZ_CAJZAV010000135.1 Protein Homology CDS 209202 210095 . - 0 ID=cds-WP_224052064.1;Parent=gene-LDO49_RS16980;Dbxref=GenBank:WP_224052064.1;Name=WP_224052064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479758.1;locus_tag=LDO49_RS16980;product=amino acid kinase family protein;protein_id=WP_224052064.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 210151 210672 . - . ID=gene-LDO49_RS16985;Name=LDO49_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16985;old_locus_tag=BCEP4_220217 NZ_CAJZAV010000135.1 Protein Homology CDS 210151 210672 . - 0 ID=cds-WP_224052066.1;Parent=gene-LDO49_RS16985;Dbxref=GenBank:WP_224052066.1;Name=WP_224052066.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356212.1;locus_tag=LDO49_RS16985;product=PTS sugar transporter subunit IIA;protein_id=WP_224052066.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 211082 211453 . - . ID=gene-LDO49_RS16990;Name=LDO49_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16990;old_locus_tag=BCEP4_220219 NZ_CAJZAV010000135.1 Protein Homology CDS 211082 211453 . - 0 ID=cds-WP_224052067.1;Parent=gene-LDO49_RS16990;Dbxref=GenBank:WP_224052067.1;Name=WP_224052067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356210.1;locus_tag=LDO49_RS16990;product=DUF6697 family protein;protein_id=WP_224052067.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 211538 211669 . + . ID=gene-LDO49_RS37315;Name=LDO49_RS37315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37315 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 211538 211669 . + 0 ID=cds-WP_257250325.1;Parent=gene-LDO49_RS37315;Dbxref=GenBank:WP_257250325.1;Name=WP_257250325.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37315;product=hypothetical protein;protein_id=WP_257250325.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 211883 213175 . - . ID=gene-LDO49_RS16995;Name=LDO49_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS16995;old_locus_tag=BCEP4_220220 NZ_CAJZAV010000135.1 Protein Homology CDS 211883 213175 . - 0 ID=cds-WP_060070890.1;Parent=gene-LDO49_RS16995;Dbxref=GenBank:WP_060070890.1;Name=WP_060070890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495724.1;locus_tag=LDO49_RS16995;product=hypothetical protein;protein_id=WP_060070890.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 213360 215000 . - . ID=gene-LDO49_RS17000;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=LDO49_RS17000;old_locus_tag=BCEP4_220221 NZ_CAJZAV010000135.1 Protein Homology CDS 213360 215000 . - 0 ID=cds-WP_021156751.1;Parent=gene-LDO49_RS17000;Dbxref=GenBank:WP_021156751.1;Name=WP_021156751.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760091.1;locus_tag=LDO49_RS17000;product=chaperonin GroEL;protein_id=WP_021156751.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 215013 215303 . - . ID=gene-LDO49_RS17005;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=LDO49_RS17005;old_locus_tag=BCEP4_220222 NZ_CAJZAV010000135.1 Protein Homology CDS 215013 215303 . - 0 ID=cds-WP_027790739.1;Parent=gene-LDO49_RS17005;Dbxref=GenBank:WP_027790739.1;Name=WP_027790739.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=groES;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694564.1;locus_tag=LDO49_RS17005;product=co-chaperone GroES;protein_id=WP_027790739.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 215458 216417 . - . ID=gene-LDO49_RS17010;Name=LDO49_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17010;old_locus_tag=BCEP4_220224 NZ_CAJZAV010000135.1 Protein Homology CDS 215458 216417 . - 0 ID=cds-WP_224052068.1;Parent=gene-LDO49_RS17010;Dbxref=GenBank:WP_224052068.1;Name=WP_224052068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494638.1;locus_tag=LDO49_RS17010;product=LysR substrate-binding domain-containing protein;protein_id=WP_224052068.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 216602 217735 . + . ID=gene-LDO49_RS17015;Name=LDO49_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17015;old_locus_tag=BCEP4_220225 NZ_CAJZAV010000135.1 Protein Homology CDS 216602 217735 . + 0 ID=cds-WP_224052079.1;Parent=gene-LDO49_RS17015;Dbxref=GenBank:WP_224052079.1;Name=WP_224052079.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494636.1;locus_tag=LDO49_RS17015;product=M20 aminoacylase family protein;protein_id=WP_224052079.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 217786 218583 . + . ID=gene-LDO49_RS17020;Name=LDO49_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17020;old_locus_tag=BCEP4_220226 NZ_CAJZAV010000135.1 Protein Homology CDS 217786 218583 . + 0 ID=cds-WP_224052070.1;Parent=gene-LDO49_RS17020;Dbxref=GenBank:WP_224052070.1;Name=WP_224052070.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758245.1;locus_tag=LDO49_RS17020;product=ABC transporter substrate-binding protein;protein_id=WP_224052070.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 218635 219819 . + . ID=gene-LDO49_RS17025;Name=LDO49_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17025;old_locus_tag=BCEP4_220227 NZ_CAJZAV010000135.1 Protein Homology CDS 218635 219819 . + 0 ID=cds-WP_224052072.1;Parent=gene-LDO49_RS17025;Dbxref=GenBank:WP_224052072.1;Name=WP_224052072.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411059.1;locus_tag=LDO49_RS17025;product=porin;protein_id=WP_224052072.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 219869 220888 . - . ID=gene-LDO49_RS17030;Name=LDO49_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17030;old_locus_tag=BCEP4_220228 NZ_CAJZAV010000135.1 Protein Homology CDS 219869 220888 . - 0 ID=cds-WP_059589399.1;Parent=gene-LDO49_RS17030;Dbxref=GenBank:WP_059589399.1;Name=WP_059589399.1;Ontology_term=GO:0008270,GO:0016491,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416414.1;locus_tag=LDO49_RS17030;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_059589399.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 221016 221927 . + . ID=gene-LDO49_RS17035;Name=LDO49_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17035;old_locus_tag=BCEP4_220229 NZ_CAJZAV010000135.1 Protein Homology CDS 221016 221927 . + 0 ID=cds-WP_048021706.1;Parent=gene-LDO49_RS17035;Dbxref=GenBank:WP_048021706.1;Name=WP_048021706.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404415.1;locus_tag=LDO49_RS17035;product=LysR family transcriptional regulator;protein_id=WP_048021706.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 221964 222284 . - . ID=gene-LDO49_RS17040;Name=csgH;gbkey=Gene;gene=csgH;gene_biotype=protein_coding;locus_tag=LDO49_RS17040;old_locus_tag=BCEP4_220230 NZ_CAJZAV010000135.1 Protein Homology CDS 221964 222284 . - 0 ID=cds-WP_059494537.1;Parent=gene-LDO49_RS17040;Dbxref=GenBank:WP_059494537.1;Name=WP_059494537.1;gbkey=CDS;gene=csgH;inference=COORDINATES: protein motif:HMM:NF041112.1;locus_tag=LDO49_RS17040;product=curli-like amyloid fiber formation chaperone CsgH;protein_id=WP_059494537.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 222356 223732 . - . ID=gene-LDO49_RS17045;Name=LDO49_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17045;old_locus_tag=BCEP4_220231 NZ_CAJZAV010000135.1 Protein Homology CDS 222356 223732 . - 0 ID=cds-WP_059653910.1;Parent=gene-LDO49_RS17045;Dbxref=GenBank:WP_059653910.1;Name=WP_059653910.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018688.6;locus_tag=LDO49_RS17045;product=beta strand repeat-containing protein;protein_id=WP_059653910.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 223862 224404 . - . ID=gene-LDO49_RS17050;Name=LDO49_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17050;old_locus_tag=BCEP4_220232 NZ_CAJZAV010000135.1 GeneMarkS-2+ CDS 223862 224404 . - 0 ID=cds-WP_124841570.1;Parent=gene-LDO49_RS17050;Dbxref=GenBank:WP_124841570.1;Name=WP_124841570.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS17050;product=hypothetical protein;protein_id=WP_124841570.1;transl_table=11 NZ_CAJZAV010000135.1 RefSeq gene 224434 225333 . - . ID=gene-LDO49_RS17055;Name=LDO49_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17055;old_locus_tag=BCEP4_220233 NZ_CAJZAV010000135.1 Protein Homology CDS 224434 225333 . - 0 ID=cds-WP_042976486.1;Parent=gene-LDO49_RS17055;Dbxref=GenBank:WP_042976486.1;Name=WP_042976486.1;Ontology_term=GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356180.1;locus_tag=LDO49_RS17055;product=CsgG/HfaB family protein;protein_id=WP_042976486.1;transl_table=11 ##sequence-region NZ_CAJZAV010000136.1 1 2679 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000136.1 RefSeq region 1 2679 . + . ID=NZ_CAJZAV010000136.1:1..2679;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_220 NZ_CAJZAV010000136.1 RefSeq gene 1 853 . - . ID=gene-LDO49_RS17060;Name=LDO49_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17060;partial=true;start_range=.,1 NZ_CAJZAV010000136.1 Protein Homology CDS 1 853 . - 0 ID=cds-WP_253074679.1;Parent=gene-LDO49_RS17060;Dbxref=GenBank:WP_253074679.1;Name=WP_253074679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365959.1;locus_tag=LDO49_RS17060;partial=true;product=rhodanese-like domain-containing protein;protein_id=WP_253074679.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000136.1 RefSeq gene 959 1525 . - . ID=gene-LDO49_RS17065;Name=LDO49_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17065;old_locus_tag=BCEP4_2200002 NZ_CAJZAV010000136.1 Protein Homology CDS 959 1525 . - 0 ID=cds-WP_060071706.1;Parent=gene-LDO49_RS17065;Dbxref=GenBank:WP_060071706.1;Name=WP_060071706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755516.1;locus_tag=LDO49_RS17065;product=cysteine dioxygenase;protein_id=WP_060071706.1;transl_table=11 NZ_CAJZAV010000136.1 RefSeq gene 1543 2517 . + . ID=gene-LDO49_RS17070;Name=LDO49_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17070;old_locus_tag=BCEP4_2200003 NZ_CAJZAV010000136.1 Protein Homology CDS 1543 2517 . + 0 ID=cds-WP_174413061.1;Parent=gene-LDO49_RS17070;Dbxref=GenBank:WP_174413061.1;Name=WP_174413061.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482083.1;locus_tag=LDO49_RS17070;product=LysR family transcriptional regulator;protein_id=WP_174413061.1;transl_table=11 ##sequence-region NZ_CAJZAV010000137.1 1 2977 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000137.1 RefSeq region 1 2977 . + . ID=NZ_CAJZAV010000137.1:1..2977;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_221 NZ_CAJZAV010000137.1 RefSeq gene 1 642 . + . ID=gene-LDO49_RS17075;Name=LDO49_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17075;old_locus_tag=BCEP4_2210001;partial=true;start_range=.,1 NZ_CAJZAV010000137.1 Protein Homology CDS 1 642 . + 0 ID=cds-WP_224052080.1;Parent=gene-LDO49_RS17075;Dbxref=GenBank:WP_224052080.1;Name=WP_224052080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546218.1;locus_tag=LDO49_RS17075;partial=true;product=beta-ketoacyl synthase chain length factor;protein_id=WP_224052080.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000137.1 RefSeq gene 642 1145 . + . ID=gene-LDO49_RS17080;Name=LDO49_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17080;old_locus_tag=BCEP4_2210002 NZ_CAJZAV010000137.1 Protein Homology CDS 642 1145 . + 0 ID=cds-WP_060069856.1;Parent=gene-LDO49_RS17080;Dbxref=GenBank:WP_060069856.1;Name=WP_060069856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546219.1;locus_tag=LDO49_RS17080;product=hotdog family protein;protein_id=WP_060069856.1;transl_table=11 NZ_CAJZAV010000137.1 RefSeq gene 1177 1467 . + . ID=gene-LDO49_RS17085;Name=LDO49_RS17085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17085;old_locus_tag=BCEP4_2210003 NZ_CAJZAV010000137.1 Protein Homology CDS 1177 1467 . + 0 ID=cds-WP_048025657.1;Parent=gene-LDO49_RS17085;Dbxref=GenBank:WP_048025657.1;Name=WP_048025657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364722.1;locus_tag=LDO49_RS17085;product=hypothetical protein;protein_id=WP_048025657.1;transl_table=11 NZ_CAJZAV010000137.1 RefSeq gene 1559 1765 . - . ID=gene-LDO49_RS17090;Name=LDO49_RS17090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17090;old_locus_tag=BCEP4_2210004 NZ_CAJZAV010000137.1 Protein Homology CDS 1559 1765 . - 0 ID=cds-WP_224052082.1;Parent=gene-LDO49_RS17090;Dbxref=GenBank:WP_224052082.1;Name=WP_224052082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546221.1;locus_tag=LDO49_RS17090;product=hypothetical protein;protein_id=WP_224052082.1;transl_table=11 NZ_CAJZAV010000137.1 RefSeq gene 1874 2617 . - . ID=gene-LDO49_RS17095;Name=phbB;gbkey=Gene;gene=phbB;gene_biotype=protein_coding;locus_tag=LDO49_RS17095;old_locus_tag=BCEP4_2210005 NZ_CAJZAV010000137.1 Protein Homology CDS 1874 2617 . - 0 ID=cds-WP_048025659.1;Parent=gene-LDO49_RS17095;Dbxref=GenBank:WP_048025659.1;Name=WP_048025659.1;Ontology_term=GO:0042619,GO:0018454,GO:0005737;gbkey=CDS;gene=phbB;go_component=cytoplasm|0005737||IEA;go_function=acetoacetyl-CoA reductase activity|0018454||IEA;go_process=poly-hydroxybutyrate biosynthetic process|0042619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212714.1;locus_tag=LDO49_RS17095;product=acetoacetyl-CoA reductase;protein_id=WP_048025659.1;transl_table=11 NZ_CAJZAV010000137.1 RefSeq pseudogene 2835 2977 . - . ID=gene-LDO49_RS17100;Name=LDO49_RS17100;end_range=2977,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS17100;old_locus_tag=BCEP4_2210006;partial=true;pseudo=true NZ_CAJZAV010000137.1 Protein Homology CDS 2835 2977 . - 2 ID=cds-LDO49_RS17100;Parent=gene-LDO49_RS17100;Note=Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase%2C catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2977,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884947.1;locus_tag=LDO49_RS17100;partial=true;product=acetyl-CoA C-acetyltransferase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000138.1 1 1299 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000138.1 RefSeq region 1 1299 . + . ID=NZ_CAJZAV010000138.1:1..1299;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_222 NZ_CAJZAV010000138.1 RefSeq gene 7 1077 . - . ID=gene-LDO49_RS17105;Name=LDO49_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17105;old_locus_tag=BCEP4_2220001 NZ_CAJZAV010000138.1 Protein Homology CDS 7 1077 . - 0 ID=cds-WP_059492598.1;Parent=gene-LDO49_RS17105;Dbxref=GenBank:WP_059492598.1;Name=WP_059492598.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339490.1;locus_tag=LDO49_RS17105;product=porin;protein_id=WP_059492598.1;transl_table=11 ##sequence-region NZ_CAJZAV010000139.1 1 1739 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000139.1 RefSeq region 1 1739 . + . ID=NZ_CAJZAV010000139.1:1..1739;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_223 NZ_CAJZAV010000139.1 RefSeq gene 1 126 . - . ID=gene-LDO49_RS38120;Name=LDO49_RS38120;end_range=126,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38120;partial=true;start_range=.,1 NZ_CAJZAV010000139.1 Protein Homology CDS 1 126 . - 1 ID=cds-WP_443797967.1;Parent=gene-LDO49_RS38120;Dbxref=GenBank:WP_443797967.1;Name=WP_443797967.1;end_range=126,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495449.1;locus_tag=LDO49_RS38120;partial=true;product=EAL domain-containing protein;protein_id=WP_443797967.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000139.1 RefSeq gene 137 727 . - . ID=gene-LDO49_RS17110;Name=LDO49_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17110;old_locus_tag=BCEP4_2230002;partial=true;start_range=.,137 NZ_CAJZAV010000139.1 Protein Homology CDS 137 727 . - 0 ID=cds-WP_443797965.1;Parent=gene-LDO49_RS17110;Dbxref=GenBank:WP_443797965.1;Name=WP_443797965.1;Ontology_term=GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495449.1;locus_tag=LDO49_RS17110;partial=true;product=EAL domain-containing protein;protein_id=WP_443797965.1;start_range=.,137;transl_table=11 NZ_CAJZAV010000139.1 RefSeq gene 994 1542 . + . ID=gene-LDO49_RS17115;Name=LDO49_RS17115;end_range=1542,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17115;old_locus_tag=BCEP4_2230003;partial=true NZ_CAJZAV010000139.1 Protein Homology CDS 994 1542 . + 0 ID=cds-WP_443797968.1;Parent=gene-LDO49_RS17115;Dbxref=GenBank:WP_443797968.1;Name=WP_443797968.1;Ontology_term=GO:0006812,GO:0055085,GO:1902600,GO:0015297,GO:0016020;end_range=1542,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011325089.1;locus_tag=LDO49_RS17115;partial=true;product=cation:proton antiporter domain-containing protein;protein_id=WP_443797968.1;transl_table=11 NZ_CAJZAV010000139.1 RefSeq gene 1553 1739 . + . ID=gene-LDO49_RS38125;Name=LDO49_RS38125;end_range=1739,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38125;partial=true;start_range=.,1553 NZ_CAJZAV010000139.1 Protein Homology CDS 1553 1739 . + 0 ID=cds-WP_443797966.1;Parent=gene-LDO49_RS38125;Dbxref=GenBank:WP_443797966.1;Name=WP_443797966.1;Ontology_term=GO:0006812,GO:0055085,GO:1902600,GO:0015297,GO:0016020;end_range=1739,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009902467.1;locus_tag=LDO49_RS38125;partial=true;product=cation:proton antiporter domain-containing protein;protein_id=WP_443797966.1;start_range=.,1553;transl_table=11 ##sequence-region NZ_CAJZAV010000140.1 1 6580 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000140.1 RefSeq region 1 6580 . + . ID=NZ_CAJZAV010000140.1:1..6580;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_224 NZ_CAJZAV010000140.1 RefSeq pseudogene 1 399 . + . ID=gene-LDO49_RS38130;Name=LDO49_RS38130;end_range=399,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38130;old_locus_tag=BCEP4_2240001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000140.1 Protein Homology CDS 1 399 . + 0 ID=cds-LDO49_RS38130;Parent=gene-LDO49_RS38130;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=399,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492409.1;locus_tag=LDO49_RS38130;partial=true;product=endoribonuclease L-PSP;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000140.1 RefSeq pseudogene 410 983 . + . ID=gene-LDO49_RS38135;Name=LDO49_RS38135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38135;old_locus_tag=BCEP4_2240002;partial=true;pseudo=true;start_range=.,410 NZ_CAJZAV010000140.1 Protein Homology CDS 410 983 . + 1 ID=cds-LDO49_RS38135;Parent=gene-LDO49_RS38135;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492409.1;locus_tag=LDO49_RS38135;partial=true;product=endoribonuclease L-PSP;pseudo=true;start_range=.,410;transl_table=11 NZ_CAJZAV010000140.1 RefSeq gene 1109 1891 . + . ID=gene-LDO49_RS17125;Name=LDO49_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17125;old_locus_tag=BCEP4_2240003 NZ_CAJZAV010000140.1 Protein Homology CDS 1109 1891 . + 0 ID=cds-WP_042975723.1;Parent=gene-LDO49_RS17125;Dbxref=GenBank:WP_042975723.1;Name=WP_042975723.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694400.1;locus_tag=LDO49_RS17125;product=glycosyltransferase family 2 protein;protein_id=WP_042975723.1;transl_table=11 NZ_CAJZAV010000140.1 RefSeq gene 2087 2848 . + . ID=gene-LDO49_RS17130;Name=LDO49_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17130;old_locus_tag=BCEP4_2240004 NZ_CAJZAV010000140.1 Protein Homology CDS 2087 2848 . + 0 ID=cds-WP_021160648.1;Parent=gene-LDO49_RS17130;Dbxref=GenBank:WP_021160648.1;Name=WP_021160648.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477817.1;locus_tag=LDO49_RS17130;product=M48 family metalloprotease;protein_id=WP_021160648.1;transl_table=11 NZ_CAJZAV010000140.1 RefSeq gene 2959 4671 . - . ID=gene-LDO49_RS17135;Name=LDO49_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17135;old_locus_tag=BCEP4_2240005 NZ_CAJZAV010000140.1 Protein Homology CDS 2959 4671 . - 0 ID=cds-WP_060069841.1;Parent=gene-LDO49_RS17135;Dbxref=GenBank:WP_060069841.1;Name=WP_060069841.1;Ontology_term=GO:0015718,GO:0008028,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=monocarboxylic acid transmembrane transporter activity|0008028||IEA;go_process=monocarboxylic acid transport|0015718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761804.1;locus_tag=LDO49_RS17135;product=lactate permease LctP family transporter;protein_id=WP_060069841.1;transl_table=11 NZ_CAJZAV010000140.1 RefSeq gene 4729 6174 . - . ID=gene-LDO49_RS17140;Name=LDO49_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17140;old_locus_tag=BCEP4_2240006 NZ_CAJZAV010000140.1 Protein Homology CDS 4729 6174 . - 0 ID=cds-WP_060069839.1;Parent=gene-LDO49_RS17140;Dbxref=GenBank:WP_060069839.1;Name=WP_060069839.1;Ontology_term=GO:0006089,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886021.1;locus_tag=LDO49_RS17140;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;protein_id=WP_060069839.1;transl_table=11 NZ_CAJZAV010000140.1 RefSeq gene 6171 6580 . - . ID=gene-LDO49_RS17145;Name=LDO49_RS17145;end_range=6580,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17145;old_locus_tag=BCEP4_2240007;partial=true NZ_CAJZAV010000140.1 Protein Homology CDS 6171 6580 . - 2 ID=cds-WP_224052086.1;Parent=gene-LDO49_RS17145;Dbxref=GenBank:WP_224052086.1;Name=WP_224052086.1;Ontology_term=GO:0006089;end_range=6580,.;gbkey=CDS;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364706.1;locus_tag=LDO49_RS17145;partial=true;product=LutC/YkgG family protein;protein_id=WP_224052086.1;transl_table=11 ##sequence-region NZ_CAJZAV010000141.1 1 3765 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000141.1 RefSeq region 1 3765 . + . ID=NZ_CAJZAV010000141.1:1..3765;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_225 NZ_CAJZAV010000141.1 RefSeq gene 1 701 . + . ID=gene-LDO49_RS17150;Name=LDO49_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17150;old_locus_tag=BCEP4_2250001;partial=true;start_range=.,1 NZ_CAJZAV010000141.1 Protein Homology CDS 1 701 . + 2 ID=cds-WP_224052087.1;Parent=gene-LDO49_RS17150;Dbxref=GenBank:WP_224052087.1;Name=WP_224052087.1;Ontology_term=GO:0016311,GO:0008138;gbkey=CDS;go_function=protein tyrosine/serine/threonine phosphatase activity|0008138||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351687.1;locus_tag=LDO49_RS17150;partial=true;product=dual specificity protein phosphatase family protein;protein_id=WP_224052087.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000141.1 RefSeq gene 701 1153 . + . ID=gene-LDO49_RS17155;Name=LDO49_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17155;old_locus_tag=BCEP4_2250002 NZ_CAJZAV010000141.1 Protein Homology CDS 701 1153 . + 0 ID=cds-WP_104768478.1;Parent=gene-LDO49_RS17155;Dbxref=GenBank:WP_104768478.1;Name=WP_104768478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328304.1;locus_tag=LDO49_RS17155;product=hypothetical protein;protein_id=WP_104768478.1;transl_table=11 NZ_CAJZAV010000141.1 RefSeq gene 1239 2261 . - . ID=gene-LDO49_RS17160;Name=LDO49_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17160;old_locus_tag=BCEP4_2250003 NZ_CAJZAV010000141.1 Protein Homology CDS 1239 2261 . - 0 ID=cds-WP_021164184.1;Parent=gene-LDO49_RS17160;Dbxref=GenBank:WP_021164184.1;Name=WP_021164184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351689.1;locus_tag=LDO49_RS17160;product=sensor domain-containing diguanylate cyclase;protein_id=WP_021164184.1;transl_table=11 NZ_CAJZAV010000141.1 RefSeq gene 2884 3669 . - . ID=gene-LDO49_RS17165;Name=LDO49_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17165;old_locus_tag=BCEP4_2250005 NZ_CAJZAV010000141.1 Protein Homology CDS 2884 3669 . - 0 ID=cds-WP_224052088.1;Parent=gene-LDO49_RS17165;Dbxref=GenBank:WP_224052088.1;Name=WP_224052088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407082.1;locus_tag=LDO49_RS17165;product=type III pantothenate kinase;protein_id=WP_224052088.1;transl_table=11 NZ_CAJZAV010000141.1 RefSeq pseudogene 3666 3765 . - . ID=gene-LDO49_RS17170;Name=LDO49_RS17170;end_range=3765,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS17170;partial=true;pseudo=true NZ_CAJZAV010000141.1 Protein Homology CDS 3666 3765 . - 1 ID=cds-LDO49_RS17170;Parent=gene-LDO49_RS17170;Note=catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3765,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353348.1;locus_tag=LDO49_RS17170;partial=true;product=biotin--[acetyl-CoA-carboxylase] ligase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000142.1 1 29186 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000142.1 RefSeq region 1 29186 . + . ID=NZ_CAJZAV010000142.1:1..29186;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_226 NZ_CAJZAV010000142.1 RefSeq pseudogene 197 257 . + . ID=gene-LDO49_RS38140;Name=LDO49_RS38140;end_range=257,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38140;partial=true;pseudo=true NZ_CAJZAV010000142.1 Protein Homology CDS 197 257 . + 0 ID=cds-LDO49_RS38140;Parent=gene-LDO49_RS38140;Note=frameshifted%3B incomplete%3B missing C-terminus;end_range=257,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013384.6;locus_tag=LDO49_RS38140;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 268 1053 . + . ID=gene-LDO49_RS17175;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=LDO49_RS17175;old_locus_tag=BCEP4_2260002;partial=true;start_range=.,268 NZ_CAJZAV010000142.1 Protein Homology CDS 268 1053 . + 0 ID=cds-WP_443797969.1;Parent=gene-LDO49_RS17175;Dbxref=GenBank:WP_443797969.1;Name=WP_443797969.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339268.1;locus_tag=LDO49_RS17175;partial=true;product=low-specificity L-threonine aldolase;protein_id=WP_443797969.1;start_range=.,268;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 1168 1380 . - . ID=gene-LDO49_RS17180;Name=LDO49_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17180;old_locus_tag=BCEP4_2260003 NZ_CAJZAV010000142.1 Protein Homology CDS 1168 1380 . - 0 ID=cds-WP_042978387.1;Parent=gene-LDO49_RS17180;Dbxref=GenBank:WP_042978387.1;Name=WP_042978387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758457.1;locus_tag=LDO49_RS17180;product=DUF1059 domain-containing protein;protein_id=WP_042978387.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 1547 2452 . - . ID=gene-LDO49_RS17185;Name=LDO49_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17185;old_locus_tag=BCEP4_2260004 NZ_CAJZAV010000142.1 Protein Homology CDS 1547 2452 . - 0 ID=cds-WP_059487548.1;Parent=gene-LDO49_RS17185;Dbxref=GenBank:WP_059487548.1;Name=WP_059487548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750650.1;locus_tag=LDO49_RS17185;product=HTH-type transcriptional regulator ArgP;protein_id=WP_059487548.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 2740 3393 . + . ID=gene-LDO49_RS17190;Name=LDO49_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17190;old_locus_tag=BCEP4_2260005 NZ_CAJZAV010000142.1 Protein Homology CDS 2740 3393 . + 0 ID=cds-WP_048023540.1;Parent=gene-LDO49_RS17190;Dbxref=GenBank:WP_048023540.1;Name=WP_048023540.1;Ontology_term=GO:0008379;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013337690.1;locus_tag=LDO49_RS17190;product=peroxiredoxin;protein_id=WP_048023540.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 3518 4588 . + . ID=gene-LDO49_RS17195;Name=LDO49_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17195;old_locus_tag=BCEP4_2260006 NZ_CAJZAV010000142.1 Protein Homology CDS 3518 4588 . + 0 ID=cds-WP_060074549.1;Parent=gene-LDO49_RS17195;Dbxref=GenBank:WP_060074549.1;Name=WP_060074549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367024.1;locus_tag=LDO49_RS17195;product=rhodanese-like domain-containing protein;protein_id=WP_060074549.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 4716 5375 . + . ID=gene-LDO49_RS17200;Name=LDO49_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17200;old_locus_tag=BCEP4_2260007 NZ_CAJZAV010000142.1 Protein Homology CDS 4716 5375 . + 0 ID=cds-WP_021164299.1;Parent=gene-LDO49_RS17200;Dbxref=GenBank:WP_021164299.1;Name=WP_021164299.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548950.1;locus_tag=LDO49_RS17200;product=glutathione S-transferase family protein;protein_id=WP_021164299.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 5475 6167 . - . ID=gene-LDO49_RS17205;Name=LDO49_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17205;old_locus_tag=BCEP4_2260008 NZ_CAJZAV010000142.1 Protein Homology CDS 5475 6167 . - 0 ID=cds-WP_060074471.1;Parent=gene-LDO49_RS17205;Dbxref=GenBank:WP_060074471.1;Name=WP_060074471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406677.1;locus_tag=LDO49_RS17205;product=phosphatase PAP2 family protein;protein_id=WP_060074471.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 6643 7281 . - . ID=gene-LDO49_RS17210;Name=LDO49_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17210;old_locus_tag=BCEP4_2260009 NZ_CAJZAV010000142.1 Protein Homology CDS 6643 7281 . - 0 ID=cds-WP_060074470.1;Parent=gene-LDO49_RS17210;Dbxref=GenBank:WP_060074470.1;Name=WP_060074470.1;Ontology_term=GO:1901170,GO:0018845,GO:0043295;gbkey=CDS;go_function=2-hydroxychromene-2-carboxylate isomerase activity|0018845||IEA,glutathione binding|0043295||IEA;go_process=naphthalene catabolic process|1901170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367019.1;locus_tag=LDO49_RS17210;product=2-hydroxychromene-2-carboxylate isomerase;protein_id=WP_060074470.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 7444 8265 . - . ID=gene-LDO49_RS17215;Name=LDO49_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17215;old_locus_tag=BCEP4_2260010 NZ_CAJZAV010000142.1 Protein Homology CDS 7444 8265 . - 0 ID=cds-WP_124475479.1;Parent=gene-LDO49_RS17215;Dbxref=GenBank:WP_124475479.1;Name=WP_124475479.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367018.1;locus_tag=LDO49_RS17215;product=IclR family transcriptional regulator;protein_id=WP_124475479.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 8438 9424 . + . ID=gene-LDO49_RS17220;Name=LDO49_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17220;old_locus_tag=BCEP4_2260011 NZ_CAJZAV010000142.1 Protein Homology CDS 8438 9424 . + 0 ID=cds-WP_060074468.1;Parent=gene-LDO49_RS17220;Dbxref=GenBank:WP_060074468.1;Name=WP_060074468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339276.1;locus_tag=LDO49_RS17220;product=hydroxymethylglutaryl-CoA lyase;protein_id=WP_060074468.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 9421 10701 . + . ID=gene-LDO49_RS17225;Name=LDO49_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17225;old_locus_tag=BCEP4_2260012 NZ_CAJZAV010000142.1 Protein Homology CDS 9421 10701 . + 0 ID=cds-WP_060074467.1;Parent=gene-LDO49_RS17225;Dbxref=GenBank:WP_060074467.1;Name=WP_060074467.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335764.1;locus_tag=LDO49_RS17225;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_060074467.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 10785 12092 . + . ID=gene-LDO49_RS17230;Name=LDO49_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17230;old_locus_tag=BCEP4_2260013 NZ_CAJZAV010000142.1 Protein Homology CDS 10785 12092 . + 0 ID=cds-WP_224052089.1;Parent=gene-LDO49_RS17230;Dbxref=GenBank:WP_224052089.1;Name=WP_224052089.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339278.1;locus_tag=LDO49_RS17230;product=MFS transporter;protein_id=WP_224052089.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 12094 13227 . + . ID=gene-LDO49_RS17235;Name=LDO49_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17235;old_locus_tag=BCEP4_2260014 NZ_CAJZAV010000142.1 Protein Homology CDS 12094 13227 . + 0 ID=cds-WP_059552607.1;Parent=gene-LDO49_RS17235;Dbxref=GenBank:WP_059552607.1;Name=WP_059552607.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335766.1;locus_tag=LDO49_RS17235;product=amidohydrolase family protein;protein_id=WP_059552607.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 13259 13735 . - . ID=gene-LDO49_RS17240;Name=LDO49_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17240;old_locus_tag=BCEP4_2260015 NZ_CAJZAV010000142.1 Protein Homology CDS 13259 13735 . - 0 ID=cds-WP_048023590.1;Parent=gene-LDO49_RS17240;Dbxref=GenBank:WP_048023590.1;Name=WP_048023590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766589.1;locus_tag=LDO49_RS17240;product=SRPBCC family protein;protein_id=WP_048023590.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 13856 14341 . - . ID=gene-LDO49_RS17245;Name=LDO49_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17245;old_locus_tag=BCEP4_2260016 NZ_CAJZAV010000142.1 Protein Homology CDS 13856 14341 . - 0 ID=cds-WP_048023526.1;Parent=gene-LDO49_RS17245;Dbxref=GenBank:WP_048023526.1;Name=WP_048023526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548961.1;locus_tag=LDO49_RS17245;product=SRPBCC family protein;protein_id=WP_048023526.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 14313 14678 . - . ID=gene-LDO49_RS17250;Name=LDO49_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17250;old_locus_tag=BCEP4_2260017 NZ_CAJZAV010000142.1 Protein Homology CDS 14313 14678 . - 0 ID=cds-WP_021159939.1;Parent=gene-LDO49_RS17250;Dbxref=GenBank:WP_021159939.1;Name=WP_021159939.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339281.1;locus_tag=LDO49_RS17250;product=ArsR/SmtB family transcription factor;protein_id=WP_021159939.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 14883 15413 . + . ID=gene-LDO49_RS17255;Name=LDO49_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17255;old_locus_tag=BCEP4_2260019 NZ_CAJZAV010000142.1 Protein Homology CDS 14883 15413 . + 0 ID=cds-WP_042975362.1;Parent=gene-LDO49_RS17255;Dbxref=GenBank:WP_042975362.1;Name=WP_042975362.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339282.1;locus_tag=LDO49_RS17255;product=GNAT family N-acetyltransferase;protein_id=WP_042975362.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 15584 16162 . + . ID=gene-LDO49_RS17260;Name=LDO49_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17260;old_locus_tag=BCEP4_2260018 NZ_CAJZAV010000142.1 Protein Homology CDS 15584 16162 . + 0 ID=cds-WP_059487540.1;Parent=gene-LDO49_RS17260;Dbxref=GenBank:WP_059487540.1;Name=WP_059487540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750631.1;locus_tag=LDO49_RS17260;product=hypothetical protein;protein_id=WP_059487540.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 16209 16793 . - . ID=gene-LDO49_RS17265;Name=LDO49_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17265;old_locus_tag=BCEP4_2260020 NZ_CAJZAV010000142.1 Protein Homology CDS 16209 16793 . - 0 ID=cds-WP_021159936.1;Parent=gene-LDO49_RS17265;Dbxref=GenBank:WP_021159936.1;Name=WP_021159936.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483950.1;locus_tag=LDO49_RS17265;product=TetR/AcrR family transcriptional regulator;protein_id=WP_021159936.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 17140 17844 . + . ID=gene-LDO49_RS17270;Name=LDO49_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17270;old_locus_tag=BCEP4_2260021 NZ_CAJZAV010000142.1 Protein Homology CDS 17140 17844 . + 0 ID=cds-WP_048023522.1;Parent=gene-LDO49_RS17270;Dbxref=GenBank:WP_048023522.1;Name=WP_048023522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480370.1;locus_tag=LDO49_RS17270;product=SDR family oxidoreductase;protein_id=WP_048023522.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 17909 19111 . - . ID=gene-LDO49_RS17275;Name=fabV;gbkey=Gene;gene=fabV;gene_biotype=protein_coding;locus_tag=LDO49_RS17275;old_locus_tag=BCEP4_2260022 NZ_CAJZAV010000142.1 Protein Homology CDS 17909 19111 . - 0 ID=cds-WP_021159934.1;Parent=gene-LDO49_RS17275;Dbxref=GenBank:WP_021159934.1;Name=WP_021159934.1;Ontology_term=GO:0006633,GO:0004318;gbkey=CDS;gene=fabV;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397317.1;locus_tag=LDO49_RS17275;product=enoyl-ACP reductase FabV;protein_id=WP_021159934.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 19273 19806 . + . ID=gene-LDO49_RS17280;Name=LDO49_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17280;old_locus_tag=BCEP4_2260023 NZ_CAJZAV010000142.1 Protein Homology CDS 19273 19806 . + 0 ID=cds-WP_011353812.1;Parent=gene-LDO49_RS17280;Dbxref=GenBank:WP_011353812.1;Name=WP_011353812.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900884.1;locus_tag=LDO49_RS17280;product=GbsR/MarR family transcriptional regulator;protein_id=WP_011353812.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 19896 21215 . + . ID=gene-LDO49_RS17285;Name=LDO49_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17285;old_locus_tag=BCEP4_2260024 NZ_CAJZAV010000142.1 Protein Homology CDS 19896 21215 . + 0 ID=cds-WP_060074466.1;Parent=gene-LDO49_RS17285;Dbxref=GenBank:WP_060074466.1;Name=WP_060074466.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496205.1;locus_tag=LDO49_RS17285;product=SDR family oxidoreductase;protein_id=WP_060074466.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 21212 21682 . + . ID=gene-LDO49_RS17290;Name=LDO49_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17290;old_locus_tag=BCEP4_2260025 NZ_CAJZAV010000142.1 Protein Homology CDS 21212 21682 . + 0 ID=cds-WP_059708848.1;Parent=gene-LDO49_RS17290;Dbxref=GenBank:WP_059708848.1;Name=WP_059708848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480374.1;locus_tag=LDO49_RS17290;product=DUF2269 family protein;protein_id=WP_059708848.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 21779 22654 . + . ID=gene-LDO49_RS17295;Name=LDO49_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17295;old_locus_tag=BCEP4_2260026 NZ_CAJZAV010000142.1 Protein Homology CDS 21779 22654 . + 0 ID=cds-WP_060074465.1;Parent=gene-LDO49_RS17295;Dbxref=GenBank:WP_060074465.1;Name=WP_060074465.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496206.1;locus_tag=LDO49_RS17295;product=thiol-disulfide oxidoreductase DCC family protein;protein_id=WP_060074465.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 22651 24150 . + . ID=gene-LDO49_RS17300;Name=LDO49_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17300;old_locus_tag=BCEP4_2260027 NZ_CAJZAV010000142.1 Protein Homology CDS 22651 24150 . + 0 ID=cds-WP_060074464.1;Parent=gene-LDO49_RS17300;Dbxref=GenBank:WP_060074464.1;Name=WP_060074464.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548972.1;locus_tag=LDO49_RS17300;product=TIGR01777 family oxidoreductase;protein_id=WP_060074464.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 24294 24917 . + . ID=gene-LDO49_RS17305;Name=LDO49_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17305;old_locus_tag=BCEP4_2260028 NZ_CAJZAV010000142.1 Protein Homology CDS 24294 24917 . + 0 ID=cds-WP_021159929.1;Parent=gene-LDO49_RS17305;Dbxref=GenBank:WP_021159929.1;Name=WP_021159929.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760787.1;locus_tag=LDO49_RS17305;product=glutathione S-transferase family protein;protein_id=WP_021159929.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 24998 26395 . - . ID=gene-LDO49_RS17310;Name=LDO49_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17310;old_locus_tag=BCEP4_2260029 NZ_CAJZAV010000142.1 Protein Homology CDS 24998 26395 . - 0 ID=cds-WP_060074463.1;Parent=gene-LDO49_RS17310;Dbxref=GenBank:WP_060074463.1;Name=WP_060074463.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548974.1;locus_tag=LDO49_RS17310;product=serine hydrolase domain-containing protein;protein_id=WP_060074463.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq pseudogene 26588 26871 . - . ID=gene-LDO49_RS17315;Name=LDO49_RS17315;end_range=26871,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS17315;partial=true;pseudo=true NZ_CAJZAV010000142.1 Protein Homology CDS 26588 26871 . - 0 ID=cds-LDO49_RS17315;Parent=gene-LDO49_RS17315;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=26871,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353819.1;locus_tag=LDO49_RS17315;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 26960 27379 . + . ID=gene-LDO49_RS17320;Name=LDO49_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17320;old_locus_tag=BCEP4_2260031 NZ_CAJZAV010000142.1 Protein Homology CDS 26960 27379 . + 0 ID=cds-WP_021159927.1;Parent=gene-LDO49_RS17320;Dbxref=GenBank:WP_021159927.1;Name=WP_021159927.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485763.1;locus_tag=LDO49_RS17320;product=HIT family protein;protein_id=WP_021159927.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 27634 27798 . + . ID=gene-LDO49_RS17325;Name=LDO49_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17325;old_locus_tag=BCEP4_2260032 NZ_CAJZAV010000142.1 Protein Homology CDS 27634 27798 . + 0 ID=cds-WP_021159926.1;Parent=gene-LDO49_RS17325;Dbxref=GenBank:WP_021159926.1;Name=WP_021159926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755831.1;locus_tag=LDO49_RS17325;product=hypothetical protein;protein_id=WP_021159926.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq gene 27955 28614 . + . ID=gene-LDO49_RS17330;Name=LDO49_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17330;old_locus_tag=BCEP4_2260033 NZ_CAJZAV010000142.1 Protein Homology CDS 27955 28614 . + 0 ID=cds-WP_021159925.1;Parent=gene-LDO49_RS17330;Dbxref=GenBank:WP_021159925.1;Name=WP_021159925.1;Ontology_term=GO:0032259,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548977.1;locus_tag=LDO49_RS17330;product=methyltransferase family protein;protein_id=WP_021159925.1;transl_table=11 NZ_CAJZAV010000142.1 RefSeq pseudogene 28993 29186 . + . ID=gene-LDO49_RS17335;Name=LDO49_RS17335;end_range=29186,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS17335;partial=true;pseudo=true NZ_CAJZAV010000142.1 Protein Homology CDS 28993 29186 . + 0 ID=cds-LDO49_RS17335;Parent=gene-LDO49_RS17335;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=29186,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880981.1;locus_tag=LDO49_RS17335;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000143.1 1 10978 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000143.1 RefSeq region 1 10978 . + . ID=NZ_CAJZAV010000143.1:1..10978;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_227 NZ_CAJZAV010000143.1 RefSeq pseudogene 1 325 . - . ID=gene-LDO49_RS17340;Name=LDO49_RS17340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS17340;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000143.1 GeneMarkS-2+ CDS 1 325 . - 0 ID=cds-LDO49_RS17340;Parent=gene-LDO49_RS17340;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS17340;partial=true;product=cytochrome c;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000143.1 RefSeq gene 316 717 . - . ID=gene-LDO49_RS17345;Name=LDO49_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17345;old_locus_tag=BCEP4_2270002 NZ_CAJZAV010000143.1 Protein Homology CDS 316 717 . - 0 ID=cds-WP_059621001.1;Parent=gene-LDO49_RS17345;Dbxref=GenBank:WP_059621001.1;Name=WP_059621001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011695019.1;locus_tag=LDO49_RS17345;product=hypothetical protein;protein_id=WP_059621001.1;transl_table=11 NZ_CAJZAV010000143.1 RefSeq gene 714 3353 . - . ID=gene-LDO49_RS17350;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=LDO49_RS17350;old_locus_tag=BCEP4_2270003 NZ_CAJZAV010000143.1 Protein Homology CDS 714 3353 . - 0 ID=cds-WP_224052090.1;Parent=gene-LDO49_RS17350;Dbxref=GenBank:WP_224052090.1;Name=WP_224052090.1;Ontology_term=GO:0015990,GO:0004129;gbkey=CDS;gene=ctaD;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493757.1;locus_tag=LDO49_RS17350;product=cytochrome c oxidase subunit I;protein_id=WP_224052090.1;transl_table=11 NZ_CAJZAV010000143.1 RefSeq gene 3367 4392 . - . ID=gene-LDO49_RS17355;Name=coxB;gbkey=Gene;gene=coxB;gene_biotype=protein_coding;locus_tag=LDO49_RS17355;old_locus_tag=BCEP4_2270004 NZ_CAJZAV010000143.1 Protein Homology CDS 3367 4392 . - 0 ID=cds-WP_224052091.1;Parent=gene-LDO49_RS17355;Dbxref=GenBank:WP_224052091.1;Name=WP_224052091.1;Ontology_term=GO:0004129,GO:0016020;gbkey=CDS;gene=coxB;go_component=membrane|0016020||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498275.1;locus_tag=LDO49_RS17355;product=cytochrome c oxidase subunit II;protein_id=WP_224052091.1;transl_table=11 NZ_CAJZAV010000143.1 RefSeq gene 4698 5681 . + . ID=gene-LDO49_RS17360;Name=LDO49_RS17360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17360;old_locus_tag=BCEP4_2270006 NZ_CAJZAV010000143.1 Protein Homology CDS 4698 5681 . + 0 ID=cds-WP_224052092.1;Parent=gene-LDO49_RS17360;Dbxref=GenBank:WP_224052092.1;Name=WP_224052092.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767300.1;locus_tag=LDO49_RS17360;product=SDR family oxidoreductase;protein_id=WP_224052092.1;transl_table=11 NZ_CAJZAV010000143.1 RefSeq gene 5687 7465 . + . ID=gene-LDO49_RS17365;Name=LDO49_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17365;old_locus_tag=BCEP4_2270005 NZ_CAJZAV010000143.1 Protein Homology CDS 5687 7465 . + 0 ID=cds-WP_224052094.1;Parent=gene-LDO49_RS17365;Dbxref=GenBank:WP_224052094.1;Name=WP_224052094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482040.1;locus_tag=LDO49_RS17365;product=glycoside hydrolase family 15 protein;protein_id=WP_224052094.1;transl_table=11 NZ_CAJZAV010000143.1 RefSeq gene 7506 9323 . - . ID=gene-LDO49_RS17370;Name=LDO49_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17370;old_locus_tag=BCEP4_2270007 NZ_CAJZAV010000143.1 Protein Homology CDS 7506 9323 . - 0 ID=cds-WP_060220888.1;Parent=gene-LDO49_RS17370;Dbxref=GenBank:WP_060220888.1;Name=WP_060220888.1;Ontology_term=GO:0000287,GO:0030976;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372601.1;locus_tag=LDO49_RS17370;product=thiamine pyrophosphate-requiring protein;protein_id=WP_060220888.1;transl_table=11 NZ_CAJZAV010000143.1 RefSeq gene 9454 10554 . + . ID=gene-LDO49_RS17375;Name=LDO49_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17375;old_locus_tag=BCEP4_2270008 NZ_CAJZAV010000143.1 Protein Homology CDS 9454 10554 . + 0 ID=cds-WP_224052093.1;Parent=gene-LDO49_RS17375;Dbxref=GenBank:WP_224052093.1;Name=WP_224052093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405139.1;locus_tag=LDO49_RS17375;product=enolase C-terminal domain-like protein;protein_id=WP_224052093.1;transl_table=11 NZ_CAJZAV010000143.1 RefSeq pseudogene 10577 10978 . + . ID=gene-LDO49_RS17380;Name=LDO49_RS17380;end_range=10978,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS17380;partial=true;pseudo=true NZ_CAJZAV010000143.1 Protein Homology CDS 10577 10978 . + 0 ID=cds-LDO49_RS17380;Parent=gene-LDO49_RS17380;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=10978,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493754.1;locus_tag=LDO49_RS17380;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000144.1 1 11327 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000144.1 RefSeq region 1 11327 . + . ID=NZ_CAJZAV010000144.1:1..11327;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_228 NZ_CAJZAV010000144.1 RefSeq pseudogene 94 300 . + . ID=gene-LDO49_RS17385;Name=LDO49_RS17385;end_range=300,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS17385;old_locus_tag=BCEP4_2280001;partial=true;pseudo=true NZ_CAJZAV010000144.1 Protein Homology CDS 94 300 . + 0 ID=cds-LDO49_RS17385;Parent=gene-LDO49_RS17385;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=300,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759494.1;locus_tag=LDO49_RS17385;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAV010000144.1 RefSeq gene 660 1799 . + . ID=gene-LDO49_RS17390;Name=LDO49_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17390;old_locus_tag=BCEP4_2280002 NZ_CAJZAV010000144.1 Protein Homology CDS 660 1799 . + 0 ID=cds-WP_059495916.1;Parent=gene-LDO49_RS17390;Dbxref=GenBank:WP_059495916.1;Name=WP_059495916.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:NF012656.6;locus_tag=LDO49_RS17390;product=acyl-CoA dehydrogenase family protein;protein_id=WP_059495916.1;transl_table=11 NZ_CAJZAV010000144.1 RefSeq gene 1847 2749 . + . ID=gene-LDO49_RS17395;Name=LDO49_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17395;old_locus_tag=BCEP4_2280003 NZ_CAJZAV010000144.1 Protein Homology CDS 1847 2749 . + 0 ID=cds-WP_059488474.1;Parent=gene-LDO49_RS17395;Dbxref=GenBank:WP_059488474.1;Name=WP_059488474.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF015297.7;locus_tag=LDO49_RS17395;product=HpcH/HpaI aldolase/citrate lyase family protein;protein_id=WP_059488474.1;transl_table=11 NZ_CAJZAV010000144.1 RefSeq gene 2757 3410 . + . ID=gene-LDO49_RS17400;Name=LDO49_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17400;old_locus_tag=BCEP4_2280004 NZ_CAJZAV010000144.1 Protein Homology CDS 2757 3410 . + 0 ID=cds-WP_021160967.1;Parent=gene-LDO49_RS17400;Dbxref=GenBank:WP_021160967.1;Name=WP_021160967.1;Ontology_term=GO:0008615,GO:0036001,GO:0042823,GO:0004733,GO:0010181,GO:0016491,GO:0042301,GO:0042803,GO:1902444,GO:0005829,GO:0032991;gbkey=CDS;go_component=cytosol|0005829||IEA,protein-containing complex|0032991||IEA;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,phosphate ion binding|0042301||IEA,protein homodimerization activity|0042803||IEA,riboflavin binding|1902444||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,'de novo' pyridoxal 5'-phosphate biosynthetic process|0036001||IEA,pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: protein motif:HMM:NF004231.0;locus_tag=LDO49_RS17400;product=pyridoxine/pyridoxamine 5'-phosphate oxidase;protein_id=WP_021160967.1;transl_table=11 NZ_CAJZAV010000144.1 RefSeq gene 3458 4666 . + . ID=gene-LDO49_RS17405;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=LDO49_RS17405;old_locus_tag=BCEP4_2280006 NZ_CAJZAV010000144.1 Protein Homology CDS 3458 4666 . + 0 ID=cds-WP_060074671.1;Parent=gene-LDO49_RS17405;Dbxref=GenBank:WP_060074671.1;Name=WP_060074671.1;Ontology_term=GO:0009086,GO:0047804;gbkey=CDS;gene=metC;go_function=cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366517.1;locus_tag=LDO49_RS17405;product=cystathionine beta-lyase;protein_id=WP_060074671.1;transl_table=11 NZ_CAJZAV010000144.1 RefSeq gene 4660 5304 . + . ID=gene-LDO49_RS17410;Name=LDO49_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17410;old_locus_tag=BCEP4_2280005 NZ_CAJZAV010000144.1 Protein Homology CDS 4660 5304 . + 0 ID=cds-WP_021160969.1;Parent=gene-LDO49_RS17410;Dbxref=GenBank:WP_021160969.1;Name=WP_021160969.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549317.1;locus_tag=LDO49_RS17410;product=glutathione S-transferase family protein;protein_id=WP_021160969.1;transl_table=11 NZ_CAJZAV010000144.1 RefSeq gene 5378 6160 . + . ID=gene-LDO49_RS17415;Name=LDO49_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17415;old_locus_tag=BCEP4_2280007 NZ_CAJZAV010000144.1 Protein Homology CDS 5378 6160 . + 0 ID=cds-WP_063800523.1;Parent=gene-LDO49_RS17415;Dbxref=GenBank:WP_063800523.1;Name=WP_063800523.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF005072.0;locus_tag=LDO49_RS17415;product=glutamine amidotransferase;protein_id=WP_063800523.1;transl_table=11 NZ_CAJZAV010000144.1 RefSeq gene 6083 6817 . - . ID=gene-LDO49_RS17420;Name=LDO49_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17420;old_locus_tag=BCEP4_2280008 NZ_CAJZAV010000144.1 Protein Homology CDS 6083 6817 . - 0 ID=cds-WP_081067383.1;Parent=gene-LDO49_RS17420;Dbxref=GenBank:WP_081067383.1;Name=WP_081067383.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015437.6;locus_tag=LDO49_RS17420;product=autoinducer binding domain-containing protein;protein_id=WP_081067383.1;transl_table=11 NZ_CAJZAV010000144.1 RefSeq gene 6904 7398 . - . ID=gene-LDO49_RS17425;Name=LDO49_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17425;old_locus_tag=BCEP4_2280009 NZ_CAJZAV010000144.1 Protein Homology CDS 6904 7398 . - 0 ID=cds-WP_224052095.1;Parent=gene-LDO49_RS17425;Dbxref=GenBank:WP_224052095.1;Name=WP_224052095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759498.1;locus_tag=LDO49_RS17425;product=hypothetical protein;protein_id=WP_224052095.1;transl_table=11 NZ_CAJZAV010000144.1 RefSeq gene 7395 8933 . - . ID=gene-LDO49_RS17430;Name=LDO49_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17430;old_locus_tag=BCEP4_2280010 NZ_CAJZAV010000144.1 Protein Homology CDS 7395 8933 . - 0 ID=cds-WP_059817025.1;Parent=gene-LDO49_RS17430;Dbxref=GenBank:WP_059817025.1;Name=WP_059817025.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759499.1;locus_tag=LDO49_RS17430;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_059817025.1;transl_table=11 NZ_CAJZAV010000144.1 RefSeq gene 8930 10105 . - . ID=gene-LDO49_RS17435;Name=LDO49_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17435 NZ_CAJZAV010000144.1 Protein Homology CDS 8930 10105 . - 0 ID=cds-WP_224052096.1;Parent=gene-LDO49_RS17435;Dbxref=GenBank:WP_224052096.1;Name=WP_224052096.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012739.7;locus_tag=LDO49_RS17435;product=HlyD family efflux transporter periplasmic adaptor subunit;protein_id=WP_224052096.1;transl_table=11 NZ_CAJZAV010000144.1 RefSeq pseudogene 10088 11327 . - . ID=gene-LDO49_RS17440;Name=LDO49_RS17440;end_range=11327,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS17440;partial=true;pseudo=true;start_range=.,10088 NZ_CAJZAV010000144.1 Protein Homology CDS 10088 11327 . - 1 ID=cds-LDO49_RS17440;Parent=gene-LDO49_RS17440;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=11327,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544614.1;locus_tag=LDO49_RS17440;partial=true;product=site-specific recombinase;pseudo=true;start_range=.,10088;transl_table=11 ##sequence-region NZ_CAJZAV010000145.1 1 1061 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000145.1 RefSeq region 1 1061 . + . ID=NZ_CAJZAV010000145.1:1..1061;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_229 NZ_CAJZAV010000145.1 RefSeq gene 1 710 . + . ID=gene-LDO49_RS17445;Name=LDO49_RS17445;end_range=710,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17445;old_locus_tag=BCEP4_2290001;partial=true;start_range=.,1 NZ_CAJZAV010000145.1 Protein Homology CDS 1 710 . + 0 ID=cds-WP_443797970.1;Parent=gene-LDO49_RS17445;Dbxref=GenBank:WP_443797970.1;Name=WP_443797970.1;end_range=710,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011793521.1;locus_tag=LDO49_RS17445;partial=true;product=elongation factor Tu;protein_id=WP_443797970.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000145.1 RefSeq pseudogene 721 1061 . + . ID=gene-LDO49_RS38145;Name=tuf;end_range=1061,.;gbkey=Gene;gene=tuf;gene_biotype=pseudogene;locus_tag=LDO49_RS38145;partial=true;pseudo=true;start_range=.,721 NZ_CAJZAV010000145.1 Protein Homology CDS 721 1061 . + 0 ID=cds-LDO49_RS38145;Parent=gene-LDO49_RS38145;Note=EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1061,.;gbkey=CDS;gene=tuf;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011793521.1;locus_tag=LDO49_RS38145;partial=true;product=elongation factor Tu;pseudo=true;start_range=.,721;transl_table=11 ##sequence-region NZ_CAJZAV010000146.1 1 11692 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000146.1 RefSeq region 1 11692 . + . ID=NZ_CAJZAV010000146.1:1..11692;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_23 NZ_CAJZAV010000146.1 RefSeq gene 1 254 . + . ID=gene-LDO49_RS17450;Name=LDO49_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17450;old_locus_tag=BCEP4_230001;partial=true;start_range=.,1 NZ_CAJZAV010000146.1 Protein Homology CDS 1 254 . + 2 ID=cds-WP_290369861.1;Parent=gene-LDO49_RS17450;Dbxref=GenBank:WP_290369861.1;Name=WP_290369861.1;Ontology_term=GO:0000160,GO:0006935,GO:0000156,GO:0008984,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphorelay response regulator activity|0000156||IEA,protein-glutamate methylesterase activity|0008984||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365781.1;locus_tag=LDO49_RS17450;partial=true;product=chemotaxis protein CheB;protein_id=WP_290369861.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000146.1 RefSeq gene 310 1377 . + . ID=gene-LDO49_RS17455;Name=LDO49_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17455;old_locus_tag=BCEP4_230002 NZ_CAJZAV010000146.1 Protein Homology CDS 310 1377 . + 0 ID=cds-WP_042977849.1;Parent=gene-LDO49_RS17455;Dbxref=GenBank:WP_042977849.1;Name=WP_042977849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355615.1;locus_tag=LDO49_RS17455;product=response regulator;protein_id=WP_042977849.1;transl_table=11 NZ_CAJZAV010000146.1 RefSeq gene 1412 3661 . - . ID=gene-LDO49_RS17460;Name=LDO49_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17460;old_locus_tag=BCEP4_230003 NZ_CAJZAV010000146.1 Protein Homology CDS 1412 3661 . - 0 ID=cds-WP_060072310.1;Parent=gene-LDO49_RS17460;Dbxref=GenBank:WP_060072310.1;Name=WP_060072310.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487684.1;locus_tag=LDO49_RS17460;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_060072310.1;transl_table=11 NZ_CAJZAV010000146.1 RefSeq gene 4258 4980 . + . ID=gene-LDO49_RS17465;Name=LDO49_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17465;old_locus_tag=BCEP4_230004 NZ_CAJZAV010000146.1 Protein Homology CDS 4258 4980 . + 0 ID=cds-WP_048025779.1;Parent=gene-LDO49_RS17465;Dbxref=GenBank:WP_048025779.1;Name=WP_048025779.1;Ontology_term=GO:0019120;gbkey=CDS;go_function=hydrolase activity%2C acting on acid halide bonds%2C in C-halide compounds|0019120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754371.1;locus_tag=LDO49_RS17465;product=haloacid dehalogenase type II;protein_id=WP_048025779.1;transl_table=11 NZ_CAJZAV010000146.1 RefSeq gene 5036 6046 . + . ID=gene-LDO49_RS17470;Name=LDO49_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17470;old_locus_tag=BCEP4_230006 NZ_CAJZAV010000146.1 Protein Homology CDS 5036 6046 . + 0 ID=cds-WP_224052097.1;Parent=gene-LDO49_RS17470;Dbxref=GenBank:WP_224052097.1;Name=WP_224052097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365777.1;locus_tag=LDO49_RS17470;product=hypothetical protein;protein_id=WP_224052097.1;transl_table=11 NZ_CAJZAV010000146.1 RefSeq gene 6043 6540 . - . ID=gene-LDO49_RS17475;Name=LDO49_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17475;old_locus_tag=BCEP4_230007 NZ_CAJZAV010000146.1 Protein Homology CDS 6043 6540 . - 0 ID=cds-WP_059484229.1;Parent=gene-LDO49_RS17475;Dbxref=GenBank:WP_059484229.1;Name=WP_059484229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006391604.1;locus_tag=LDO49_RS17475;product=SRPBCC family protein;protein_id=WP_059484229.1;transl_table=11 NZ_CAJZAV010000146.1 RefSeq gene 6600 7391 . - . ID=gene-LDO49_RS17480;Name=LDO49_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17480;old_locus_tag=BCEP4_230008 NZ_CAJZAV010000146.1 Protein Homology CDS 6600 7391 . - 0 ID=cds-WP_165581494.1;Parent=gene-LDO49_RS17480;Dbxref=GenBank:WP_165581494.1;Name=WP_165581494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479245.1;locus_tag=LDO49_RS17480;product=uracil permease;protein_id=WP_165581494.1;transl_table=11 NZ_CAJZAV010000146.1 RefSeq gene 7482 8441 . - . ID=gene-LDO49_RS17485;Name=LDO49_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17485;old_locus_tag=BCEP4_230009 NZ_CAJZAV010000146.1 Protein Homology CDS 7482 8441 . - 0 ID=cds-WP_124843967.1;Parent=gene-LDO49_RS17485;Dbxref=GenBank:WP_124843967.1;Name=WP_124843967.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355628.1;locus_tag=LDO49_RS17485;product=LysR family transcriptional regulator;protein_id=WP_124843967.1;transl_table=11 NZ_CAJZAV010000146.1 RefSeq gene 8599 9918 . + . ID=gene-LDO49_RS17490;Name=LDO49_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17490;old_locus_tag=BCEP4_230010 NZ_CAJZAV010000146.1 Protein Homology CDS 8599 9918 . + 0 ID=cds-WP_027791229.1;Parent=gene-LDO49_RS17490;Dbxref=GenBank:WP_027791229.1;Name=WP_027791229.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479247.1;locus_tag=LDO49_RS17490;product=MFS transporter;protein_id=WP_027791229.1;transl_table=11 NZ_CAJZAV010000146.1 RefSeq gene 10034 11560 . + . ID=gene-LDO49_RS17495;Name=LDO49_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17495;old_locus_tag=BCEP4_230011 NZ_CAJZAV010000146.1 Protein Homology CDS 10034 11560 . + 0 ID=cds-WP_059484230.1;Parent=gene-LDO49_RS17495;Dbxref=GenBank:WP_059484230.1;Name=WP_059484230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658468.1;locus_tag=LDO49_RS17495;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_059484230.1;transl_table=11 NZ_CAJZAV010000146.1 RefSeq gene 11575 11692 . + . ID=gene-LDO49_RS17500;Name=LDO49_RS17500;end_range=11692,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17500;partial=true NZ_CAJZAV010000146.1 Protein Homology CDS 11575 11692 . + 0 ID=cds-WP_224052099.1;Parent=gene-LDO49_RS17500;Dbxref=GenBank:WP_224052099.1;Name=WP_224052099.1;Ontology_term=GO:0050661;end_range=11692,.;gbkey=CDS;go_function=NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899744.1;locus_tag=LDO49_RS17500;partial=true;product=NAD(P)-binding domain-containing protein;protein_id=WP_224052099.1;transl_table=11 ##sequence-region NZ_CAJZAV010000147.1 1 2726 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000147.1 RefSeq region 1 2726 . + . ID=NZ_CAJZAV010000147.1:1..2726;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_230 NZ_CAJZAV010000147.1 RefSeq gene 1221 1469 . - . ID=gene-LDO49_RS17505;Name=LDO49_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17505;old_locus_tag=BCEP4_2300001 NZ_CAJZAV010000147.1 GeneMarkS-2+ CDS 1221 1469 . - 0 ID=cds-WP_060070208.1;Parent=gene-LDO49_RS17505;Dbxref=GenBank:WP_060070208.1;Name=WP_060070208.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS17505;product=hypothetical protein;protein_id=WP_060070208.1;transl_table=11 NZ_CAJZAV010000147.1 RefSeq gene 2168 2253 . + . ID=gene-LDO49_RS17510;Name=LDO49_RS17510;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS17510;old_locus_tag=BCEP4_TRNA25 NZ_CAJZAV010000147.1 tRNAscan-SE tRNA 2168 2253 . + . ID=rna-LDO49_RS17510;Parent=gene-LDO49_RS17510;anticodon=(pos:2202..2204);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS17510;product=tRNA-Tyr NZ_CAJZAV010000147.1 tRNAscan-SE exon 2168 2253 . + . ID=exon-LDO49_RS17510-1;Parent=rna-LDO49_RS17510;anticodon=(pos:2202..2204);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS17510;product=tRNA-Tyr NZ_CAJZAV010000147.1 RefSeq gene 2297 2370 . + . ID=gene-LDO49_RS17515;Name=LDO49_RS17515;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS17515;old_locus_tag=BCEP4_TRNA26 NZ_CAJZAV010000147.1 tRNAscan-SE tRNA 2297 2370 . + . ID=rna-LDO49_RS17515;Parent=gene-LDO49_RS17515;anticodon=(pos:2329..2331);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS17515;product=tRNA-Gly NZ_CAJZAV010000147.1 tRNAscan-SE exon 2297 2370 . + . ID=exon-LDO49_RS17515-1;Parent=rna-LDO49_RS17515;anticodon=(pos:2329..2331);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS17515;product=tRNA-Gly NZ_CAJZAV010000147.1 RefSeq gene 2395 2469 . + . ID=gene-LDO49_RS17520;Name=LDO49_RS17520;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS17520;old_locus_tag=BCEP4_TRNA27 NZ_CAJZAV010000147.1 tRNAscan-SE tRNA 2395 2469 . + . ID=rna-LDO49_RS17520;Parent=gene-LDO49_RS17520;anticodon=(pos:2427..2429);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS17520;product=tRNA-Thr NZ_CAJZAV010000147.1 tRNAscan-SE exon 2395 2469 . + . ID=exon-LDO49_RS17520-1;Parent=rna-LDO49_RS17520;anticodon=(pos:2427..2429);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS17520;product=tRNA-Thr NZ_CAJZAV010000147.1 RefSeq gene 2586 2726 . + . ID=gene-LDO49_RS17525;Name=LDO49_RS17525;end_range=2726,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17525;partial=true;start_range=.,2586 NZ_CAJZAV010000147.1 Protein Homology CDS 2586 2726 . + 2 ID=cds-WP_372585828.1-2;Parent=gene-LDO49_RS17525;Dbxref=GenBank:WP_372585828.1;Name=WP_372585828.1;Ontology_term=GO:0005525;end_range=2726,.;gbkey=CDS;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011901887.1;locus_tag=LDO49_RS17525;partial=true;product=EF-Tu/IF-2/RF-3 family GTPase;protein_id=WP_372585828.1;start_range=.,2586;transl_table=11 ##sequence-region NZ_CAJZAV010000148.1 1 7257 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000148.1 RefSeq region 1 7257 . + . ID=NZ_CAJZAV010000148.1:1..7257;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_231 NZ_CAJZAV010000148.1 RefSeq pseudogene 1 882 . - . ID=gene-LDO49_RS17530;Name=LDO49_RS17530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS17530;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000148.1 Protein Homology CDS 1 882 . - 0 ID=cds-LDO49_RS17530;Parent=gene-LDO49_RS17530;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013104584.1;locus_tag=LDO49_RS17530;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000148.1 RefSeq pseudogene 950 1480 . + . ID=gene-LDO49_RS17535;Name=LDO49_RS17535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS17535;partial=true;pseudo=true;start_range=.,950 NZ_CAJZAV010000148.1 Protein Homology CDS 950 1480 . + 0 ID=cds-LDO49_RS17535;Parent=gene-LDO49_RS17535;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611183.1;locus_tag=LDO49_RS17535;partial=true;product=transposase;pseudo=true;start_range=.,950;transl_table=11 NZ_CAJZAV010000148.1 RefSeq gene 1964 2311 . - . ID=gene-LDO49_RS17540;Name=LDO49_RS17540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17540 NZ_CAJZAV010000148.1 Protein Homology CDS 1964 2311 . - 0 ID=cds-WP_081067177.1;Parent=gene-LDO49_RS17540;Dbxref=GenBank:WP_081067177.1;Name=WP_081067177.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335248.1;locus_tag=LDO49_RS17540;product=H-NS histone family protein;protein_id=WP_081067177.1;transl_table=11 NZ_CAJZAV010000148.1 RefSeq gene 2639 4591 . - . ID=gene-LDO49_RS17545;Name=LDO49_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17545;old_locus_tag=BCEP4_2310009 NZ_CAJZAV010000148.1 Protein Homology CDS 2639 4591 . - 0 ID=cds-WP_224052100.1;Parent=gene-LDO49_RS17545;Dbxref=GenBank:WP_224052100.1;Name=WP_224052100.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025214.6;locus_tag=LDO49_RS17545;product=O-linked N-acetylglucosamine transferase family protein;protein_id=WP_224052100.1;transl_table=11 NZ_CAJZAV010000148.1 RefSeq gene 4847 5209 . - . ID=gene-LDO49_RS17550;Name=LDO49_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17550 NZ_CAJZAV010000148.1 Protein Homology CDS 4847 5209 . - 0 ID=cds-WP_081067175.1;Parent=gene-LDO49_RS17550;Dbxref=GenBank:WP_081067175.1;Name=WP_081067175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011205038.1;locus_tag=LDO49_RS17550;product=H-NS histone family protein;protein_id=WP_081067175.1;transl_table=11 NZ_CAJZAV010000148.1 RefSeq gene 5595 6296 . - . ID=gene-LDO49_RS17555;Name=LDO49_RS17555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17555;old_locus_tag=BCEP4_2310014 NZ_CAJZAV010000148.1 Protein Homology CDS 5595 6296 . - 0 ID=cds-WP_224052102.1;Parent=gene-LDO49_RS17555;Dbxref=GenBank:WP_224052102.1;Name=WP_224052102.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762599.1;locus_tag=LDO49_RS17555;product=OmpA family protein;protein_id=WP_224052102.1;transl_table=11 NZ_CAJZAV010000148.1 RefSeq gene 6386 7257 . - . ID=gene-LDO49_RS17560;Name=LDO49_RS17560;end_range=7257,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17560;partial=true NZ_CAJZAV010000148.1 Protein Homology CDS 6386 7257 . - 2 ID=cds-WP_224052103.1;Parent=gene-LDO49_RS17560;Dbxref=GenBank:WP_224052103.1;Name=WP_224052103.1;Ontology_term=GO:0007155,GO:0015031;end_range=7257,.;gbkey=CDS;go_process=cell adhesion|0007155||IEA,protein transport|0015031||IEA;inference=COORDINATES: protein motif:HMM:NF015831.6;locus_tag=LDO49_RS17560;partial=true;product=YadA family autotransporter adhesin;protein_id=WP_224052103.1;transl_table=11 ##sequence-region NZ_CAJZAV010000149.1 1 11217 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000149.1 RefSeq region 1 11217 . + . ID=NZ_CAJZAV010000149.1:1..11217;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_232 NZ_CAJZAV010000149.1 RefSeq gene 1 616 . + . ID=gene-LDO49_RS17565;Name=LDO49_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17565;old_locus_tag=BCEP4_2320001;partial=true;start_range=.,1 NZ_CAJZAV010000149.1 Protein Homology CDS 1 616 . + 1 ID=cds-WP_224052104.1;Parent=gene-LDO49_RS17565;Dbxref=GenBank:WP_224052104.1;Name=WP_224052104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483714.1;locus_tag=LDO49_RS17565;partial=true;product=ATP-binding domain-containing protein;protein_id=WP_224052104.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000149.1 RefSeq gene 613 1017 . + . ID=gene-LDO49_RS17570;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=LDO49_RS17570;old_locus_tag=BCEP4_2320002 NZ_CAJZAV010000149.1 Protein Homology CDS 613 1017 . + 0 ID=cds-WP_124545067.1;Parent=gene-LDO49_RS17570;Dbxref=GenBank:WP_124545067.1;Name=WP_124545067.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526513.1;locus_tag=LDO49_RS17570;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_124545067.1;transl_table=11 NZ_CAJZAV010000149.1 RefSeq gene 1076 2356 . - . ID=gene-LDO49_RS17575;Name=LDO49_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17575;old_locus_tag=BCEP4_2320003 NZ_CAJZAV010000149.1 Protein Homology CDS 1076 2356 . - 0 ID=cds-WP_059551943.1;Parent=gene-LDO49_RS17575;Dbxref=GenBank:WP_059551943.1;Name=WP_059551943.1;Ontology_term=GO:0007165,GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213733.1;locus_tag=LDO49_RS17575;product=sensor domain-containing phosphodiesterase;protein_id=WP_059551943.1;transl_table=11 NZ_CAJZAV010000149.1 RefSeq gene 2820 3746 . - . ID=gene-LDO49_RS17580;Name=LDO49_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17580;old_locus_tag=BCEP4_2320005 NZ_CAJZAV010000149.1 Protein Homology CDS 2820 3746 . - 0 ID=cds-WP_021162065.1;Parent=gene-LDO49_RS17580;Dbxref=GenBank:WP_021162065.1;Name=WP_021162065.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351494.1;locus_tag=LDO49_RS17580;product=DMT family transporter;protein_id=WP_021162065.1;transl_table=11 NZ_CAJZAV010000149.1 RefSeq gene 3890 4129 . - . ID=gene-LDO49_RS17585;Name=LDO49_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17585;old_locus_tag=BCEP4_2320006 NZ_CAJZAV010000149.1 Protein Homology CDS 3890 4129 . - 0 ID=cds-WP_021162064.1;Parent=gene-LDO49_RS17585;Dbxref=GenBank:WP_021162064.1;Name=WP_021162064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363480.1;locus_tag=LDO49_RS17585;product=hypothetical protein;protein_id=WP_021162064.1;transl_table=11 NZ_CAJZAV010000149.1 RefSeq gene 4326 4538 . - . ID=gene-LDO49_RS17590;Name=LDO49_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17590;old_locus_tag=BCEP4_2320007 NZ_CAJZAV010000149.1 Protein Homology CDS 4326 4538 . - 0 ID=cds-WP_021162063.1;Parent=gene-LDO49_RS17590;Dbxref=GenBank:WP_021162063.1;Name=WP_021162063.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545020.1;locus_tag=LDO49_RS17590;product=glycine zipper 2TM domain-containing protein;protein_id=WP_021162063.1;transl_table=11 NZ_CAJZAV010000149.1 RefSeq gene 4788 6719 . - . ID=gene-LDO49_RS17595;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=LDO49_RS17595;old_locus_tag=BCEP4_2320008 NZ_CAJZAV010000149.1 Protein Homology CDS 4788 6719 . - 0 ID=cds-WP_048024440.1;Parent=gene-LDO49_RS17595;Dbxref=GenBank:WP_048024440.1;Name=WP_048024440.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697214.1;locus_tag=LDO49_RS17595;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_048024440.1;transl_table=11 NZ_CAJZAV010000149.1 cmsearch riboswitch 6844 6960 . - . ID=id-NZ_CAJZAV010000149.1:6844..6960;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAV010000149.1 RefSeq gene 7230 7505 . + . ID=gene-LDO49_RS17600;Name=LDO49_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17600;old_locus_tag=BCEP4_2320009 NZ_CAJZAV010000149.1 Protein Homology CDS 7230 7505 . + 0 ID=cds-WP_027787940.1;Parent=gene-LDO49_RS17600;Dbxref=GenBank:WP_027787940.1;Name=WP_027787940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363482.1;locus_tag=LDO49_RS17600;product=pentapeptide MXKDX repeat protein;protein_id=WP_027787940.1;transl_table=11 NZ_CAJZAV010000149.1 RefSeq gene 7598 8230 . + . ID=gene-LDO49_RS17605;Name=LDO49_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17605;old_locus_tag=BCEP4_2320010 NZ_CAJZAV010000149.1 Protein Homology CDS 7598 8230 . + 0 ID=cds-WP_027787939.1;Parent=gene-LDO49_RS17605;Dbxref=GenBank:WP_027787939.1;Name=WP_027787939.1;Ontology_term=GO:0005506,GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483711.1;locus_tag=LDO49_RS17605;product=cytochrome b/b6 domain-containing protein;protein_id=WP_027787939.1;transl_table=11 NZ_CAJZAV010000149.1 RefSeq gene 8260 9048 . + . ID=gene-LDO49_RS17610;Name=LDO49_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17610;old_locus_tag=BCEP4_2320011 NZ_CAJZAV010000149.1 Protein Homology CDS 8260 9048 . + 0 ID=cds-WP_021162060.1;Parent=gene-LDO49_RS17610;Dbxref=GenBank:WP_021162060.1;Name=WP_021162060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754215.1;locus_tag=LDO49_RS17610;product=molybdopterin-dependent oxidoreductase;protein_id=WP_021162060.1;transl_table=11 NZ_CAJZAV010000149.1 RefSeq gene 9089 9370 . - . ID=gene-LDO49_RS17615;Name=LDO49_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17615;old_locus_tag=BCEP4_2320012 NZ_CAJZAV010000149.1 Protein Homology CDS 9089 9370 . - 0 ID=cds-WP_059486657.1;Parent=gene-LDO49_RS17615;Dbxref=GenBank:WP_059486657.1;Name=WP_059486657.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497662.1;locus_tag=LDO49_RS17615;product=helix-turn-helix domain-containing protein;protein_id=WP_059486657.1;transl_table=11 NZ_CAJZAV010000149.1 RefSeq gene 9367 9720 . - . ID=gene-LDO49_RS17620;Name=LDO49_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17620;old_locus_tag=BCEP4_2320014 NZ_CAJZAV010000149.1 Protein Homology CDS 9367 9720 . - 0 ID=cds-WP_042976757.1;Parent=gene-LDO49_RS17620;Dbxref=GenBank:WP_042976757.1;Name=WP_042976757.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328204.1;locus_tag=LDO49_RS17620;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_042976757.1;transl_table=11 NZ_CAJZAV010000149.1 RefSeq gene 10226 11217 . + . ID=gene-LDO49_RS17625;Name=LDO49_RS17625;end_range=11217,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17625;partial=true NZ_CAJZAV010000149.1 Protein Homology CDS 10226 11217 . + 0 ID=cds-WP_224052105.1;Parent=gene-LDO49_RS17625;Dbxref=GenBank:WP_224052105.1;Name=WP_224052105.1;Ontology_term=GO:0016020;end_range=11217,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497659.1;locus_tag=LDO49_RS17625;partial=true;product=EamA family transporter;protein_id=WP_224052105.1;transl_table=11 ##sequence-region NZ_CAJZAV010000150.1 1 948 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000150.1 RefSeq region 1 948 . + . ID=NZ_CAJZAV010000150.1:1..948;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_233 NZ_CAJZAV010000150.1 RefSeq gene 1 948 . + . ID=gene-LDO49_RS17630;Name=LDO49_RS17630;end_range=948,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17630;partial=true;start_range=.,1 NZ_CAJZAV010000150.1 Protein Homology CDS 1 948 . + 0 ID=cds-WP_224052106.1;Parent=gene-LDO49_RS17630;Dbxref=GenBank:WP_224052106.1;Name=WP_224052106.1;Ontology_term=GO:0008483,GO:0030170;end_range=948,.;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478352.1;locus_tag=LDO49_RS17630;partial=true;product=aminotransferase;protein_id=WP_224052106.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAV010000151.1 1 9166 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000151.1 RefSeq region 1 9166 . + . ID=NZ_CAJZAV010000151.1:1..9166;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_234 NZ_CAJZAV010000151.1 RefSeq pseudogene 1 143 . + . ID=gene-LDO49_RS17635;Name=LDO49_RS17635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS17635;old_locus_tag=BCEP4_2340001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000151.1 Protein Homology CDS 1 143 . + 2 ID=cds-LDO49_RS17635;Parent=gene-LDO49_RS17635;Note=Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase%2C catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009905164.1;locus_tag=LDO49_RS17635;partial=true;product=acetyl-CoA C-acetyltransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000151.1 RefSeq gene 278 1018 . + . ID=gene-LDO49_RS17640;Name=LDO49_RS17640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17640;old_locus_tag=BCEP4_2340002 NZ_CAJZAV010000151.1 Protein Homology CDS 278 1018 . + 0 ID=cds-WP_006491801.1;Parent=gene-LDO49_RS17640;Dbxref=GenBank:WP_006491801.1;Name=WP_006491801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007586437.1;locus_tag=LDO49_RS17640;product=3-ketoacyl-ACP reductase;protein_id=WP_006491801.1;transl_table=11 NZ_CAJZAV010000151.1 RefSeq gene 1138 1704 . + . ID=gene-LDO49_RS17645;Name=phaR;gbkey=Gene;gene=phaR;gene_biotype=protein_coding;locus_tag=LDO49_RS17645;old_locus_tag=BCEP4_2340003 NZ_CAJZAV010000151.1 Protein Homology CDS 1138 1704 . + 0 ID=cds-WP_011549704.1;Parent=gene-LDO49_RS17645;Dbxref=GenBank:WP_011549704.1;Name=WP_011549704.1;Ontology_term=GO:0006355;gbkey=CDS;gene=phaR;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192676.1;locus_tag=LDO49_RS17645;product=polyhydroxyalkanoate synthesis repressor PhaR;protein_id=WP_011549704.1;transl_table=11 NZ_CAJZAV010000151.1 RefSeq gene 2123 2953 . + . ID=gene-LDO49_RS17650;Name=LDO49_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17650;old_locus_tag=BCEP4_2340004 NZ_CAJZAV010000151.1 Protein Homology CDS 2123 2953 . + 0 ID=cds-WP_224052107.1;Parent=gene-LDO49_RS17650;Dbxref=GenBank:WP_224052107.1;Name=WP_224052107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352238.1;locus_tag=LDO49_RS17650;product=lysozyme inhibitor LprI family protein;protein_id=WP_224052107.1;transl_table=11 NZ_CAJZAV010000151.1 RefSeq gene 3018 3272 . - . ID=gene-LDO49_RS17655;Name=LDO49_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17655;old_locus_tag=BCEP4_2340005 NZ_CAJZAV010000151.1 Protein Homology CDS 3018 3272 . - 0 ID=cds-WP_021159790.1;Parent=gene-LDO49_RS17655;Dbxref=GenBank:WP_021159790.1;Name=WP_021159790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417214.1;locus_tag=LDO49_RS17655;product=hypothetical protein;protein_id=WP_021159790.1;transl_table=11 NZ_CAJZAV010000151.1 RefSeq gene 3527 4873 . - . ID=gene-LDO49_RS17660;Name=LDO49_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17660;old_locus_tag=BCEP4_2340006 NZ_CAJZAV010000151.1 Protein Homology CDS 3527 4873 . - 0 ID=cds-WP_060057765.1;Parent=gene-LDO49_RS17660;Dbxref=GenBank:WP_060057765.1;Name=WP_060057765.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF017044.6;locus_tag=LDO49_RS17660;product=M16 family metallopeptidase;protein_id=WP_060057765.1;transl_table=11 NZ_CAJZAV010000151.1 RefSeq gene 4870 6171 . - . ID=gene-LDO49_RS17665;Name=LDO49_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17665;old_locus_tag=BCEP4_2340007 NZ_CAJZAV010000151.1 Protein Homology CDS 4870 6171 . - 0 ID=cds-WP_060072754.1;Parent=gene-LDO49_RS17665;Dbxref=GenBank:WP_060072754.1;Name=WP_060072754.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092278.1;locus_tag=LDO49_RS17665;product=M16 family metallopeptidase;protein_id=WP_060072754.1;transl_table=11 NZ_CAJZAV010000151.1 RefSeq gene 6292 6813 . - . ID=gene-LDO49_RS17670;Name=LDO49_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17670;old_locus_tag=BCEP4_2340008 NZ_CAJZAV010000151.1 GeneMarkS-2+ CDS 6292 6813 . - 0 ID=cds-WP_124476019.1;Parent=gene-LDO49_RS17670;Dbxref=GenBank:WP_124476019.1;Name=WP_124476019.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS17670;product=hypothetical protein;protein_id=WP_124476019.1;transl_table=11 NZ_CAJZAV010000151.1 RefSeq pseudogene 7104 7289 . + . ID=gene-LDO49_RS17675;Name=LDO49_RS17675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS17675;old_locus_tag=BCEP4_2340009;partial=true;pseudo=true;start_range=.,7104 NZ_CAJZAV010000151.1 Protein Homology CDS 7104 7289 . + 0 ID=cds-LDO49_RS17675;Parent=gene-LDO49_RS17675;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612186.1;locus_tag=LDO49_RS17675;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,7104;transl_table=11 NZ_CAJZAV010000151.1 RefSeq gene 7913 8431 . + . ID=gene-LDO49_RS17680;Name=LDO49_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17680;old_locus_tag=BCEP4_2340010 NZ_CAJZAV010000151.1 Protein Homology CDS 7913 8431 . + 0 ID=cds-WP_060072758.1;Parent=gene-LDO49_RS17680;Dbxref=GenBank:WP_060072758.1;Name=WP_060072758.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008167163.1;locus_tag=LDO49_RS17680;product=Hcp family type VI secretion system effector;protein_id=WP_060072758.1;transl_table=11 NZ_CAJZAV010000151.1 RefSeq gene 8523 9166 . + . ID=gene-LDO49_RS17685;Name=vgrG;end_range=9166,.;gbkey=Gene;gene=vgrG;gene_biotype=protein_coding;locus_tag=LDO49_RS17685;partial=true NZ_CAJZAV010000151.1 Protein Homology CDS 8523 9166 . + 0 ID=cds-WP_224052109.1;Parent=gene-LDO49_RS17685;Dbxref=GenBank:WP_224052109.1;Name=WP_224052109.1;end_range=9166,.;gbkey=CDS;gene=vgrG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008167165.1;locus_tag=LDO49_RS17685;partial=true;product=type VI secretion system tip protein VgrG;protein_id=WP_224052109.1;transl_table=11 ##sequence-region NZ_CAJZAV010000152.1 1 2030 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000152.1 RefSeq region 1 2030 . + . ID=NZ_CAJZAV010000152.1:1..2030;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_235 NZ_CAJZAV010000152.1 RefSeq gene 1 367 . + . ID=gene-LDO49_RS17690;Name=LDO49_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17690;old_locus_tag=BCEP4_2350001;partial=true;start_range=.,1 NZ_CAJZAV010000152.1 Protein Homology CDS 1 367 . + 1 ID=cds-WP_224052110.1;Parent=gene-LDO49_RS17690;Dbxref=GenBank:WP_224052110.1;Name=WP_224052110.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212677.1;locus_tag=LDO49_RS17690;partial=true;product=PTS transporter subunit EIIB;protein_id=WP_224052110.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000152.1 RefSeq gene 522 2030 . - . ID=gene-LDO49_RS17695;Name=LDO49_RS17695;end_range=2030,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17695;old_locus_tag=BCEP4_2350002;partial=true NZ_CAJZAV010000152.1 Protein Homology CDS 522 2030 . - 0 ID=cds-WP_224052111.1;Parent=gene-LDO49_RS17695;Dbxref=GenBank:WP_224052111.1;Name=WP_224052111.1;Ontology_term=GO:0005975,GO:0004553;end_range=2030,.;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006499030.1;locus_tag=LDO49_RS17695;partial=true;product=family 20 glycosylhydrolase;protein_id=WP_224052111.1;transl_table=11 ##sequence-region NZ_CAJZAV010000153.1 1 14769 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000153.1 RefSeq region 1 14769 . + . ID=NZ_CAJZAV010000153.1:1..14769;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_236 NZ_CAJZAV010000153.1 RefSeq gene 1 288 . + . ID=gene-LDO49_RS17700;Name=LDO49_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17700;old_locus_tag=BCEP4_2360001;partial=true;start_range=.,1 NZ_CAJZAV010000153.1 Protein Homology CDS 1 288 . + 0 ID=cds-WP_224052112.1;Parent=gene-LDO49_RS17700;Dbxref=GenBank:WP_224052112.1;Name=WP_224052112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217420.1;locus_tag=LDO49_RS17700;partial=true;product=phage holin family protein;protein_id=WP_224052112.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000153.1 RefSeq gene 281 1081 . + . ID=gene-LDO49_RS17705;Name=LDO49_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17705;old_locus_tag=BCEP4_2360002 NZ_CAJZAV010000153.1 Protein Homology CDS 281 1081 . + 0 ID=cds-WP_202754310.1;Parent=gene-LDO49_RS17705;Dbxref=GenBank:WP_202754310.1;Name=WP_202754310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217421.1;locus_tag=LDO49_RS17705;product=N-acetylmuramidase domain-containing protein;protein_id=WP_202754310.1;transl_table=11 NZ_CAJZAV010000153.1 RefSeq gene 1078 1569 . + . ID=gene-LDO49_RS17710;Name=LDO49_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17710;old_locus_tag=BCEP4_2360003 NZ_CAJZAV010000153.1 Protein Homology CDS 1078 1569 . + 0 ID=cds-WP_202754311.1;Parent=gene-LDO49_RS17710;Dbxref=GenBank:WP_202754311.1;Name=WP_202754311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327673.1;locus_tag=LDO49_RS17710;product=hypothetical protein;protein_id=WP_202754311.1;transl_table=11 NZ_CAJZAV010000153.1 RefSeq gene 1566 1976 . + . ID=gene-LDO49_RS17715;Name=LDO49_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17715;old_locus_tag=BCEP4_2360005 NZ_CAJZAV010000153.1 Protein Homology CDS 1566 1976 . + 0 ID=cds-WP_202754312.1;Parent=gene-LDO49_RS17715;Dbxref=GenBank:WP_202754312.1;Name=WP_202754312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217423.1;locus_tag=LDO49_RS17715;product=phage tail protein;protein_id=WP_202754312.1;transl_table=11 NZ_CAJZAV010000153.1 RefSeq pseudogene 2018 2321 . + . ID=gene-LDO49_RS17720;Name=LDO49_RS17720;end_range=2321,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS17720;old_locus_tag=BCEP4_2360006;partial=true;pseudo=true NZ_CAJZAV010000153.1 Protein Homology CDS 2018 2321 . + 0 ID=cds-LDO49_RS17720;Parent=gene-LDO49_RS17720;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0016032,GO:0005198,GO:0044423;end_range=2321,.;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217424.1;locus_tag=LDO49_RS17720;partial=true;product=phage virion morphogenesis protein;pseudo=true;transl_table=11 NZ_CAJZAV010000153.1 RefSeq pseudogene 2332 2393 . + . ID=gene-LDO49_RS38150;Name=LDO49_RS38150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38150;partial=true;pseudo=true;start_range=.,2332 NZ_CAJZAV010000153.1 Protein Homology CDS 2332 2393 . + 2 ID=cds-LDO49_RS38150;Parent=gene-LDO49_RS38150;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217424.1;locus_tag=LDO49_RS38150;partial=true;product=phage virion morphogenesis protein;pseudo=true;start_range=.,2332;transl_table=11 NZ_CAJZAV010000153.1 RefSeq gene 2575 4455 . + . ID=gene-LDO49_RS17725;Name=LDO49_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17725;old_locus_tag=BCEP4_2360007 NZ_CAJZAV010000153.1 Protein Homology CDS 2575 4455 . + 0 ID=cds-WP_202754314.1;Parent=gene-LDO49_RS17725;Dbxref=GenBank:WP_202754314.1;Name=WP_202754314.1;Ontology_term=GO:0004519,GO:0004527,GO:0005524,GO:0016887,GO:0046872;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,exonuclease activity|0004527||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018913215.1;locus_tag=LDO49_RS17725;product=ATP-dependent nuclease;protein_id=WP_202754314.1;transl_table=11 NZ_CAJZAV010000153.1 RefSeq gene 4666 5370 . + . ID=gene-LDO49_RS17730;Name=LDO49_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17730;old_locus_tag=BCEP4_2360009 NZ_CAJZAV010000153.1 Protein Homology CDS 4666 5370 . + 0 ID=cds-WP_202754315.1;Parent=gene-LDO49_RS17730;Dbxref=GenBank:WP_202754315.1;Name=WP_202754315.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416661.1;locus_tag=LDO49_RS17730;product=phage baseplate assembly protein V;protein_id=WP_202754315.1;transl_table=11 NZ_CAJZAV010000153.1 RefSeq gene 5376 5732 . + . ID=gene-LDO49_RS17735;Name=LDO49_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17735;old_locus_tag=BCEP4_2360010 NZ_CAJZAV010000153.1 Protein Homology CDS 5376 5732 . + 0 ID=cds-WP_372585851.1;Parent=gene-LDO49_RS17735;Dbxref=GenBank:WP_372585851.1;Name=WP_372585851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401813.1;locus_tag=LDO49_RS17735;product=GPW/gp25 family protein;protein_id=WP_372585851.1;transl_table=11 NZ_CAJZAV010000153.1 RefSeq gene 5729 6634 . + . ID=gene-LDO49_RS17740;Name=LDO49_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17740;old_locus_tag=BCEP4_2360011 NZ_CAJZAV010000153.1 Protein Homology CDS 5729 6634 . + 0 ID=cds-WP_202754317.1;Parent=gene-LDO49_RS17740;Dbxref=GenBank:WP_202754317.1;Name=WP_202754317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416675.1;locus_tag=LDO49_RS17740;product=baseplate J/gp47 family protein;protein_id=WP_202754317.1;transl_table=11 NZ_CAJZAV010000153.1 RefSeq gene 6627 7178 . + . ID=gene-LDO49_RS17745;Name=LDO49_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17745;old_locus_tag=BCEP4_2360012 NZ_CAJZAV010000153.1 Protein Homology CDS 6627 7178 . + 0 ID=cds-WP_202754318.1;Parent=gene-LDO49_RS17745;Dbxref=GenBank:WP_202754318.1;Name=WP_202754318.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757097.1;locus_tag=LDO49_RS17745;product=phage tail protein I;protein_id=WP_202754318.1;transl_table=11 NZ_CAJZAV010000153.1 RefSeq gene 7184 7963 . + . ID=gene-LDO49_RS38155;Name=LDO49_RS38155;end_range=7963,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38155;old_locus_tag=BCEP4_2360013;partial=true NZ_CAJZAV010000153.1 Protein Homology CDS 7184 7963 . + 0 ID=cds-WP_443797973.1;Parent=gene-LDO49_RS38155;Dbxref=GenBank:WP_443797973.1;Name=WP_443797973.1;end_range=7963,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016038201.1;locus_tag=LDO49_RS38155;partial=true;product=phage tail fiber protein;protein_id=WP_443797973.1;transl_table=11 NZ_CAJZAV010000153.1 RefSeq gene 7974 10408 . + . ID=gene-LDO49_RS17750;Name=LDO49_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17750;old_locus_tag=BCEP4_2360014;partial=true;start_range=.,7974 NZ_CAJZAV010000153.1 Protein Homology CDS 7974 10408 . + 2 ID=cds-WP_443797971.1;Parent=gene-LDO49_RS17750;Dbxref=GenBank:WP_443797971.1;Name=WP_443797971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875769.1;locus_tag=LDO49_RS17750;partial=true;product=phage tail fiber protein;protein_id=WP_443797971.1;start_range=.,7974;transl_table=11 NZ_CAJZAV010000153.1 RefSeq gene 10405 10839 . + . ID=gene-LDO49_RS17755;Name=LDO49_RS17755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17755;old_locus_tag=BCEP4_2360015 NZ_CAJZAV010000153.1 Protein Homology CDS 10405 10839 . + 0 ID=cds-WP_202754319.1;Parent=gene-LDO49_RS17755;Dbxref=GenBank:WP_202754319.1;Name=WP_202754319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875770.1;locus_tag=LDO49_RS17755;product=XkdW family protein;protein_id=WP_202754319.1;transl_table=11 NZ_CAJZAV010000153.1 RefSeq gene 10862 11200 . + . ID=gene-LDO49_RS17760;Name=LDO49_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17760;old_locus_tag=BCEP4_2360016 NZ_CAJZAV010000153.1 Protein Homology CDS 10862 11200 . + 0 ID=cds-WP_035984600.1;Parent=gene-LDO49_RS17760;Dbxref=GenBank:WP_035984600.1;Name=WP_035984600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724672.1;locus_tag=LDO49_RS17760;product=hypothetical protein;protein_id=WP_035984600.1;transl_table=11 NZ_CAJZAV010000153.1 RefSeq gene 11350 11532 . + . ID=gene-LDO49_RS17765;Name=LDO49_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17765 NZ_CAJZAV010000153.1 Protein Homology CDS 11350 11532 . + 0 ID=cds-WP_202754320.1;Parent=gene-LDO49_RS17765;Dbxref=GenBank:WP_202754320.1;Name=WP_202754320.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021626.6;locus_tag=LDO49_RS17765;product=Com family DNA-binding transcriptional regulator;protein_id=WP_202754320.1;transl_table=11 NZ_CAJZAV010000153.1 RefSeq gene 11510 12259 . + . ID=gene-LDO49_RS17770;Name=LDO49_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17770;old_locus_tag=BCEP4_2360017 NZ_CAJZAV010000153.1 Protein Homology CDS 11510 12259 . + 0 ID=cds-WP_202754321.1;Parent=gene-LDO49_RS17770;Dbxref=GenBank:WP_202754321.1;Name=WP_202754321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217432.1;locus_tag=LDO49_RS17770;product=DNA-methyltransferase;protein_id=WP_202754321.1;transl_table=11 NZ_CAJZAV010000153.1 RefSeq gene 12497 13457 . + . ID=gene-LDO49_RS17775;Name=LDO49_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17775;old_locus_tag=BCEP4_2360019;partial=true;start_range=.,12497 NZ_CAJZAV010000153.1 Protein Homology CDS 12497 13457 . + 1 ID=cds-WP_443797972.1;Parent=gene-LDO49_RS17775;Dbxref=GenBank:WP_443797972.1;Name=WP_443797972.1;Ontology_term=GO:0099000,GO:0098027;gbkey=CDS;go_component=virus tail%2C sheath|0098027||IEA;go_process=symbiont genome ejection through host cell envelope%2C contractile tail mechanism|0099000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217433.1;locus_tag=LDO49_RS17775;partial=true;product=phage tail sheath protein;protein_id=WP_443797972.1;start_range=.,12497;transl_table=11 NZ_CAJZAV010000153.1 RefSeq gene 13487 13996 . + . ID=gene-LDO49_RS17780;Name=LDO49_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17780;old_locus_tag=BCEP4_2360020 NZ_CAJZAV010000153.1 Protein Homology CDS 13487 13996 . + 0 ID=cds-WP_175977947.1;Parent=gene-LDO49_RS17780;Dbxref=GenBank:WP_175977947.1;Name=WP_175977947.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217434.1;locus_tag=LDO49_RS17780;product=phage major tail tube protein;protein_id=WP_175977947.1;transl_table=11 NZ_CAJZAV010000153.1 RefSeq gene 14029 14340 . + . ID=gene-LDO49_RS17785;Name=LDO49_RS17785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17785;old_locus_tag=BCEP4_2360021 NZ_CAJZAV010000153.1 Protein Homology CDS 14029 14340 . + 0 ID=cds-WP_200093557.1;Parent=gene-LDO49_RS17785;Dbxref=GenBank:WP_200093557.1;Name=WP_200093557.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724667.1;locus_tag=LDO49_RS17785;product=phage tail assembly protein;protein_id=WP_200093557.1;transl_table=11 NZ_CAJZAV010000153.1 RefSeq gene 14340 14459 . + . ID=gene-LDO49_RS17790;Name=LDO49_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17790 NZ_CAJZAV010000153.1 Protein Homology CDS 14340 14459 . + 0 ID=cds-WP_014724666.1;Parent=gene-LDO49_RS17790;Dbxref=GenBank:WP_014724666.1;Name=WP_014724666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724666.1;locus_tag=LDO49_RS17790;product=GpE family phage tail protein;protein_id=WP_014724666.1;transl_table=11 NZ_CAJZAV010000153.1 RefSeq pseudogene 14456 14769 . + . ID=gene-LDO49_RS17795;Name=LDO49_RS17795;end_range=14769,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS17795;partial=true;pseudo=true NZ_CAJZAV010000153.1 GeneMarkS-2+ CDS 14456 14769 . + 0 ID=cds-LDO49_RS17795;Parent=gene-LDO49_RS17795;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=14769,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS17795;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000154.1 1 4254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000154.1 RefSeq region 1 4254 . + . ID=NZ_CAJZAV010000154.1:1..4254;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_237 NZ_CAJZAV010000154.1 RefSeq gene 151 1221 . - . ID=gene-LDO49_RS17800;Name=LDO49_RS17800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17800;old_locus_tag=BCEP4_2370001 NZ_CAJZAV010000154.1 Protein Homology CDS 151 1221 . - 0 ID=cds-WP_176131002.1;Parent=gene-LDO49_RS17800;Dbxref=GenBank:WP_176131002.1;Name=WP_176131002.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365953.1;locus_tag=LDO49_RS17800;product=ABC transporter substrate-binding protein;protein_id=WP_176131002.1;transl_table=11 NZ_CAJZAV010000154.1 RefSeq gene 1254 2093 . - . ID=gene-LDO49_RS17805;Name=LDO49_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17805;old_locus_tag=BCEP4_2370002 NZ_CAJZAV010000154.1 Protein Homology CDS 1254 2093 . - 0 ID=cds-WP_124841336.1;Parent=gene-LDO49_RS17805;Dbxref=GenBank:WP_124841336.1;Name=WP_124841336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402356.1;locus_tag=LDO49_RS17805;product=class II aldolase/adducin family protein;protein_id=WP_124841336.1;transl_table=11 NZ_CAJZAV010000154.1 RefSeq gene 2116 3201 . - . ID=gene-LDO49_RS17810;Name=LDO49_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17810;old_locus_tag=BCEP4_2370003 NZ_CAJZAV010000154.1 Protein Homology CDS 2116 3201 . - 0 ID=cds-WP_124841335.1;Parent=gene-LDO49_RS17810;Dbxref=GenBank:WP_124841335.1;Name=WP_124841335.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402355.1;locus_tag=LDO49_RS17810;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_124841335.1;transl_table=11 NZ_CAJZAV010000154.1 RefSeq gene 3515 4254 . + . ID=gene-LDO49_RS17815;Name=LDO49_RS17815;end_range=4254,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17815;partial=true NZ_CAJZAV010000154.1 Protein Homology CDS 3515 4254 . + 0 ID=cds-WP_224052113.1;Parent=gene-LDO49_RS17815;Dbxref=GenBank:WP_224052113.1;Name=WP_224052113.1;Ontology_term=GO:0003995,GO:0050660;end_range=4254,.;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493077.1;locus_tag=LDO49_RS17815;partial=true;product=acyl-CoA dehydrogenase family protein;protein_id=WP_224052113.1;transl_table=11 ##sequence-region NZ_CAJZAV010000155.1 1 1265 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000155.1 RefSeq region 1 1265 . + . ID=NZ_CAJZAV010000155.1:1..1265;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_238 NZ_CAJZAV010000155.1 RefSeq gene 171 1265 . + . ID=gene-LDO49_RS17820;Name=LDO49_RS17820;end_range=1265,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17820;partial=true NZ_CAJZAV010000155.1 Protein Homology CDS 171 1265 . + 0 ID=cds-WP_224052114.1;Parent=gene-LDO49_RS17820;Dbxref=GenBank:WP_224052114.1;Name=WP_224052114.1;Ontology_term=GO:0004803;end_range=1265,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959400.1;locus_tag=LDO49_RS17820;partial=true;product=IS256 family transposase;protein_id=WP_224052114.1;transl_table=11 ##sequence-region NZ_CAJZAV010000156.1 1 11546 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000156.1 RefSeq region 1 11546 . + . ID=NZ_CAJZAV010000156.1:1..11546;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_239 NZ_CAJZAV010000156.1 RefSeq gene 1 339 . + . ID=gene-LDO49_RS38160;Name=LDO49_RS38160;end_range=339,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38160;old_locus_tag=BCEP4_2390001;partial=true;start_range=.,1 NZ_CAJZAV010000156.1 Protein Homology CDS 1 339 . + 0 ID=cds-WP_443797974.1;Parent=gene-LDO49_RS38160;Dbxref=GenBank:WP_443797974.1;Name=WP_443797974.1;Ontology_term=GO:0030655,GO:0008800;end_range=339,.;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_027789588.1;locus_tag=LDO49_RS38160;partial=true;product=serine hydrolase;protein_id=WP_443797974.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000156.1 RefSeq gene 350 772 . + . ID=gene-LDO49_RS38165;Name=LDO49_RS38165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38165;old_locus_tag=BCEP4_2390002;partial=true;start_range=.,350 NZ_CAJZAV010000156.1 Protein Homology CDS 350 772 . + 0 ID=cds-WP_443797975.1;Parent=gene-LDO49_RS38165;Dbxref=GenBank:WP_443797975.1;Name=WP_443797975.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_027789588.1;locus_tag=LDO49_RS38165;partial=true;product=serine hydrolase;protein_id=WP_443797975.1;start_range=.,350;transl_table=11 NZ_CAJZAV010000156.1 RefSeq gene 1256 1456 . - . ID=gene-LDO49_RS17830;Name=LDO49_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17830;old_locus_tag=BCEP4_2390003 NZ_CAJZAV010000156.1 Protein Homology CDS 1256 1456 . - 0 ID=cds-WP_021159889.1;Parent=gene-LDO49_RS17830;Dbxref=GenBank:WP_021159889.1;Name=WP_021159889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485688.1;locus_tag=LDO49_RS17830;product=hypothetical protein;protein_id=WP_021159889.1;transl_table=11 NZ_CAJZAV010000156.1 RefSeq gene 2025 2393 . - . ID=gene-LDO49_RS17835;Name=LDO49_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17835;old_locus_tag=BCEP4_2390004 NZ_CAJZAV010000156.1 Protein Homology CDS 2025 2393 . - 0 ID=cds-WP_060070509.1;Parent=gene-LDO49_RS17835;Dbxref=GenBank:WP_060070509.1;Name=WP_060070509.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339640.1;locus_tag=LDO49_RS17835;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_060070509.1;transl_table=11 NZ_CAJZAV010000156.1 RefSeq gene 2435 2881 . - . ID=gene-LDO49_RS17840;Name=LDO49_RS17840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17840;old_locus_tag=BCEP4_2390005 NZ_CAJZAV010000156.1 Protein Homology CDS 2435 2881 . - 0 ID=cds-WP_059488328.1;Parent=gene-LDO49_RS17840;Dbxref=GenBank:WP_059488328.1;Name=WP_059488328.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898679.1;locus_tag=LDO49_RS17840;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059488328.1;transl_table=11 NZ_CAJZAV010000156.1 RefSeq gene 3057 3563 . + . ID=gene-LDO49_RS17845;Name=LDO49_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17845;old_locus_tag=BCEP4_2390006 NZ_CAJZAV010000156.1 GeneMarkS-2+ CDS 3057 3563 . + 0 ID=cds-WP_059866622.1;Parent=gene-LDO49_RS17845;Dbxref=GenBank:WP_059866622.1;Name=WP_059866622.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS17845;product=hypothetical protein;protein_id=WP_059866622.1;transl_table=11 NZ_CAJZAV010000156.1 RefSeq gene 3714 5090 . - . ID=gene-LDO49_RS17850;Name=LDO49_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17850;old_locus_tag=BCEP4_2390007 NZ_CAJZAV010000156.1 Protein Homology CDS 3714 5090 . - 0 ID=cds-WP_021159888.1;Parent=gene-LDO49_RS17850;Dbxref=GenBank:WP_021159888.1;Name=WP_021159888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758172.1;locus_tag=LDO49_RS17850;product=ATP-binding protein;protein_id=WP_021159888.1;transl_table=11 NZ_CAJZAV010000156.1 RefSeq gene 5087 5749 . - . ID=gene-LDO49_RS17855;Name=LDO49_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17855;old_locus_tag=BCEP4_2390008 NZ_CAJZAV010000156.1 Protein Homology CDS 5087 5749 . - 0 ID=cds-WP_021159887.1;Parent=gene-LDO49_RS17855;Dbxref=GenBank:WP_021159887.1;Name=WP_021159887.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194706.1;locus_tag=LDO49_RS17855;product=response regulator;protein_id=WP_021159887.1;transl_table=11 NZ_CAJZAV010000156.1 RefSeq gene 5979 6332 . + . ID=gene-LDO49_RS17860;Name=LDO49_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17860;old_locus_tag=BCEP4_2390009 NZ_CAJZAV010000156.1 Protein Homology CDS 5979 6332 . + 0 ID=cds-WP_021159886.1;Parent=gene-LDO49_RS17860;Dbxref=GenBank:WP_021159886.1;Name=WP_021159886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753955.1;locus_tag=LDO49_RS17860;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_021159886.1;transl_table=11 NZ_CAJZAV010000156.1 RefSeq gene 6395 7255 . + . ID=gene-LDO49_RS17865;Name=LDO49_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17865;old_locus_tag=BCEP4_2390010 NZ_CAJZAV010000156.1 Protein Homology CDS 6395 7255 . + 0 ID=cds-WP_021159885.1;Parent=gene-LDO49_RS17865;Dbxref=GenBank:WP_021159885.1;Name=WP_021159885.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108400.1;locus_tag=LDO49_RS17865;product=MurR/RpiR family transcriptional regulator;protein_id=WP_021159885.1;transl_table=11 NZ_CAJZAV010000156.1 RefSeq gene 7310 7735 . + . ID=gene-LDO49_RS17870;Name=LDO49_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17870;old_locus_tag=BCEP4_2390011 NZ_CAJZAV010000156.1 Protein Homology CDS 7310 7735 . + 0 ID=cds-WP_021159884.1;Parent=gene-LDO49_RS17870;Dbxref=GenBank:WP_021159884.1;Name=WP_021159884.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547237.1;locus_tag=LDO49_RS17870;product=GNAT family N-acetyltransferase;protein_id=WP_021159884.1;transl_table=11 NZ_CAJZAV010000156.1 RefSeq gene 7925 9592 . + . ID=gene-LDO49_RS17875;Name=LDO49_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17875;old_locus_tag=BCEP4_2390012 NZ_CAJZAV010000156.1 Protein Homology CDS 7925 9592 . + 0 ID=cds-WP_060070506.1;Parent=gene-LDO49_RS17875;Dbxref=GenBank:WP_060070506.1;Name=WP_060070506.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339645.1;locus_tag=LDO49_RS17875;product=ankyrin repeat domain-containing protein;protein_id=WP_060070506.1;transl_table=11 NZ_CAJZAV010000156.1 RefSeq gene 9852 10712 . + . ID=gene-LDO49_RS17880;Name=LDO49_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17880;old_locus_tag=BCEP4_2390013 NZ_CAJZAV010000156.1 Protein Homology CDS 9852 10712 . + 0 ID=cds-WP_224052117.1;Parent=gene-LDO49_RS17880;Dbxref=GenBank:WP_224052117.1;Name=WP_224052117.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498871.1;locus_tag=LDO49_RS17880;product=isocitrate lyase/PEP mutase family protein;protein_id=WP_224052117.1;transl_table=11 NZ_CAJZAV010000156.1 RefSeq gene 11050 11316 . + . ID=gene-LDO49_RS17885;Name=LDO49_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17885;old_locus_tag=BCEP4_2390014 NZ_CAJZAV010000156.1 Protein Homology CDS 11050 11316 . + 0 ID=cds-WP_021164209.1;Parent=gene-LDO49_RS17885;Dbxref=GenBank:WP_021164209.1;Name=WP_021164209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396526.1;locus_tag=LDO49_RS17885;product=YodC family protein;protein_id=WP_021164209.1;transl_table=11 NZ_CAJZAV010000156.1 RefSeq pseudogene 11418 11546 . + . ID=gene-LDO49_RS17890;Name=LDO49_RS17890;end_range=11546,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS17890;partial=true;pseudo=true NZ_CAJZAV010000156.1 Protein Homology CDS 11418 11546 . + 0 ID=cds-LDO49_RS17890;Parent=gene-LDO49_RS17890;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=11546,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216565.1;locus_tag=LDO49_RS17890;partial=true;product=cytochrome P450;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000157.1 1 74807 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000157.1 RefSeq region 1 74807 . + . ID=NZ_CAJZAV010000157.1:1..74807;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_24 NZ_CAJZAV010000157.1 RefSeq gene 1 224 . - . ID=gene-LDO49_RS17895;Name=LDO49_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17895;partial=true;start_range=.,1 NZ_CAJZAV010000157.1 Protein Homology CDS 1 224 . - 0 ID=cds-WP_372585852.1;Parent=gene-LDO49_RS17895;Dbxref=GenBank:WP_372585852.1;Name=WP_372585852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338550.1;locus_tag=LDO49_RS17895;partial=true;product=DUF3761 domain-containing protein;protein_id=WP_372585852.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 286 423 . - . ID=gene-LDO49_RS17900;Name=LDO49_RS17900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17900 NZ_CAJZAV010000157.1 Protein Homology CDS 286 423 . - 0 ID=cds-WP_021157327.1;Parent=gene-LDO49_RS17900;Dbxref=GenBank:WP_021157327.1;Name=WP_021157327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897078.1;locus_tag=LDO49_RS17900;product=HHHH-motif protein;protein_id=WP_021157327.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 757 1191 . - . ID=gene-LDO49_RS17905;Name=LDO49_RS17905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17905;old_locus_tag=BCEP4_240003 NZ_CAJZAV010000157.1 Protein Homology CDS 757 1191 . - 0 ID=cds-WP_021157328.1;Parent=gene-LDO49_RS17905;Dbxref=GenBank:WP_021157328.1;Name=WP_021157328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355960.1;locus_tag=LDO49_RS17905;product=cupin domain-containing protein;protein_id=WP_021157328.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 1266 2033 . - . ID=gene-LDO49_RS17910;Name=LDO49_RS17910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17910;old_locus_tag=BCEP4_240004 NZ_CAJZAV010000157.1 Protein Homology CDS 1266 2033 . - 0 ID=cds-WP_042973307.1;Parent=gene-LDO49_RS17910;Dbxref=GenBank:WP_042973307.1;Name=WP_042973307.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330339.1;locus_tag=LDO49_RS17910;product=ABC transporter ATP-binding protein;protein_id=WP_042973307.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 2077 2790 . - . ID=gene-LDO49_RS17915;Name=LDO49_RS17915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17915;old_locus_tag=BCEP4_240005 NZ_CAJZAV010000157.1 Protein Homology CDS 2077 2790 . - 0 ID=cds-WP_011355969.1;Parent=gene-LDO49_RS17915;Dbxref=GenBank:WP_011355969.1;Name=WP_011355969.1;Ontology_term=GO:0022857,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482521.1;locus_tag=LDO49_RS17915;product=ABC transporter permease;protein_id=WP_011355969.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 2787 3476 . - . ID=gene-LDO49_RS17920;Name=LDO49_RS17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17920;old_locus_tag=BCEP4_240006 NZ_CAJZAV010000157.1 Protein Homology CDS 2787 3476 . - 0 ID=cds-WP_048022423.1;Parent=gene-LDO49_RS17920;Dbxref=GenBank:WP_048022423.1;Name=WP_048022423.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397957.1;locus_tag=LDO49_RS17920;product=ABC transporter permease;protein_id=WP_048022423.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 3668 4441 . - . ID=gene-LDO49_RS17925;Name=LDO49_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17925;old_locus_tag=BCEP4_240007 NZ_CAJZAV010000157.1 Protein Homology CDS 3668 4441 . - 0 ID=cds-WP_021157330.1;Parent=gene-LDO49_RS17925;Dbxref=GenBank:WP_021157330.1;Name=WP_021157330.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482536.1;locus_tag=LDO49_RS17925;product=ABC transporter substrate-binding protein;protein_id=WP_021157330.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 4742 5494 . - . ID=gene-LDO49_RS17930;Name=LDO49_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17930;old_locus_tag=BCEP4_240008 NZ_CAJZAV010000157.1 Protein Homology CDS 4742 5494 . - 0 ID=cds-WP_124922268.1;Parent=gene-LDO49_RS17930;Dbxref=GenBank:WP_124922268.1;Name=WP_124922268.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355972.1;locus_tag=LDO49_RS17930;product=response regulator;protein_id=WP_124922268.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 5491 7197 . - . ID=gene-LDO49_RS17935;Name=LDO49_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17935;old_locus_tag=BCEP4_240009 NZ_CAJZAV010000157.1 Protein Homology CDS 5491 7197 . - 0 ID=cds-WP_059493630.1;Parent=gene-LDO49_RS17935;Dbxref=GenBank:WP_059493630.1;Name=WP_059493630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355973.1;locus_tag=LDO49_RS17935;product=DUF4118 domain-containing protein;protein_id=WP_059493630.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 7278 9302 . - . ID=gene-LDO49_RS17940;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=LDO49_RS17940;old_locus_tag=BCEP4_240010 NZ_CAJZAV010000157.1 Protein Homology CDS 7278 9302 . - 0 ID=cds-WP_059675186.1;Parent=gene-LDO49_RS17940;Dbxref=GenBank:WP_059675186.1;Name=WP_059675186.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900186.1;locus_tag=LDO49_RS17940;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_059675186.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 9386 10084 . - . ID=gene-LDO49_RS17945;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=LDO49_RS17945;old_locus_tag=BCEP4_240011 NZ_CAJZAV010000157.1 Protein Homology CDS 9386 10084 . - 0 ID=cds-WP_196486195.1;Parent=gene-LDO49_RS17945;Dbxref=GenBank:WP_196486195.1;Name=WP_196486195.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900187.1;locus_tag=LDO49_RS17945;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_196486195.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 10095 11798 . - . ID=gene-LDO49_RS17950;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=LDO49_RS17950;old_locus_tag=BCEP4_240012 NZ_CAJZAV010000157.1 Protein Homology CDS 10095 11798 . - 0 ID=cds-WP_021157335.1;Parent=gene-LDO49_RS17950;Dbxref=GenBank:WP_021157335.1;Name=WP_021157335.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900188.1;locus_tag=LDO49_RS17950;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_021157335.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 11938 12225 . - . ID=gene-LDO49_RS37555;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=LDO49_RS37555 NZ_CAJZAV010000157.1 Protein Homology CDS 11938 12225 . - 0 ID=cds-WP_081058618.1;Parent=gene-LDO49_RS37555;Dbxref=GenBank:WP_081058618.1;Name=WP_081058618.1;Ontology_term=GO:0006813,GO:0043462,GO:0031004;gbkey=CDS;gene=kdpF;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_process=potassium ion transport|0006813||IEA,regulation of ATP-dependent activity|0043462||IEA;inference=COORDINATES: protein motif:HMM:TIGR02115.1;locus_tag=LDO49_RS37555;product=K(+)-transporting ATPase subunit F;protein_id=WP_081058618.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 12353 12667 . + . ID=gene-LDO49_RS17960;Name=LDO49_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17960;old_locus_tag=BCEP4_240013 NZ_CAJZAV010000157.1 Protein Homology CDS 12353 12667 . + 0 ID=cds-WP_224052118.1;Parent=gene-LDO49_RS17960;Dbxref=GenBank:WP_224052118.1;Name=WP_224052118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496057.1;locus_tag=LDO49_RS17960;product=hypothetical protein;protein_id=WP_224052118.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 12812 13939 . + . ID=gene-LDO49_RS17965;Name=LDO49_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17965;old_locus_tag=BCEP4_240014 NZ_CAJZAV010000157.1 Protein Homology CDS 12812 13939 . + 0 ID=cds-WP_059554575.1;Parent=gene-LDO49_RS17965;Dbxref=GenBank:WP_059554575.1;Name=WP_059554575.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900191.1;locus_tag=LDO49_RS17965;product=porin;protein_id=WP_059554575.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 14122 14817 . + . ID=gene-LDO49_RS17970;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=LDO49_RS17970;old_locus_tag=BCEP4_240015 NZ_CAJZAV010000157.1 Protein Homology CDS 14122 14817 . + 0 ID=cds-WP_048022472.1;Parent=gene-LDO49_RS17970;Dbxref=GenBank:WP_048022472.1;Name=WP_048022472.1;Ontology_term=GO:0006355,GO:0006547,GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-histidine metabolic process|0006547||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900192.1;locus_tag=LDO49_RS17970;product=histidine utilization repressor;protein_id=WP_048022472.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 14833 16074 . - . ID=gene-LDO49_RS17975;Name=LDO49_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17975;old_locus_tag=BCEP4_240016 NZ_CAJZAV010000157.1 Protein Homology CDS 14833 16074 . - 0 ID=cds-WP_224052119.1;Parent=gene-LDO49_RS17975;Dbxref=GenBank:WP_224052119.1;Name=WP_224052119.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548285.1;locus_tag=LDO49_RS17975;product=glycosyltransferase;protein_id=WP_224052119.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 16169 16789 . + . ID=gene-LDO49_RS17980;Name=LDO49_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17980;old_locus_tag=BCEP4_240017 NZ_CAJZAV010000157.1 Protein Homology CDS 16169 16789 . + 0 ID=cds-WP_060309665.1;Parent=gene-LDO49_RS17980;Dbxref=GenBank:WP_060309665.1;Name=WP_060309665.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482520.1;locus_tag=LDO49_RS17980;product=TetR/AcrR family transcriptional regulator;protein_id=WP_060309665.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 17040 17393 . + . ID=gene-LDO49_RS17985;Name=LDO49_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17985;old_locus_tag=BCEP4_240018 NZ_CAJZAV010000157.1 Protein Homology CDS 17040 17393 . + 0 ID=cds-WP_021157344.1;Parent=gene-LDO49_RS17985;Dbxref=GenBank:WP_021157344.1;Name=WP_021157344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355985.1;locus_tag=LDO49_RS17985;product=hypothetical protein;protein_id=WP_021157344.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 17431 18276 . - . ID=gene-LDO49_RS17990;Name=LDO49_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17990;old_locus_tag=BCEP4_240019 NZ_CAJZAV010000157.1 Protein Homology CDS 17431 18276 . - 0 ID=cds-WP_224052120.1;Parent=gene-LDO49_RS17990;Dbxref=GenBank:WP_224052120.1;Name=WP_224052120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493775.1;locus_tag=LDO49_RS17990;product=alpha/beta fold hydrolase;protein_id=WP_224052120.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 18386 19303 . - . ID=gene-LDO49_RS17995;Name=LDO49_RS17995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS17995;old_locus_tag=BCEP4_240020 NZ_CAJZAV010000157.1 Protein Homology CDS 18386 19303 . - 0 ID=cds-WP_059814926.1;Parent=gene-LDO49_RS17995;Dbxref=GenBank:WP_059814926.1;Name=WP_059814926.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355987.1;locus_tag=LDO49_RS17995;product=LysR family transcriptional regulator;protein_id=WP_059814926.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 19489 19734 . - . ID=gene-LDO49_RS18000;Name=LDO49_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18000;old_locus_tag=BCEP4_240021 NZ_CAJZAV010000157.1 Protein Homology CDS 19489 19734 . - 0 ID=cds-WP_042973317.1;Parent=gene-LDO49_RS18000;Dbxref=GenBank:WP_042973317.1;Name=WP_042973317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397950.1;locus_tag=LDO49_RS18000;product=DUF3717 domain-containing protein;protein_id=WP_042973317.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 19999 21534 . - . ID=gene-LDO49_RS18005;Name=LDO49_RS18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18005;old_locus_tag=BCEP4_240023 NZ_CAJZAV010000157.1 Protein Homology CDS 19999 21534 . - 0 ID=cds-WP_042973318.1;Parent=gene-LDO49_RS18005;Dbxref=GenBank:WP_042973318.1;Name=WP_042973318.1;Ontology_term=GO:0006865;gbkey=CDS;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496062.1;locus_tag=LDO49_RS18005;product=amino acid permease;protein_id=WP_042973318.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 22134 23666 . + . ID=gene-LDO49_RS18010;Name=LDO49_RS18010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18010;old_locus_tag=BCEP4_240025 NZ_CAJZAV010000157.1 Protein Homology CDS 22134 23666 . + 0 ID=cds-WP_059586145.1;Parent=gene-LDO49_RS18010;Dbxref=GenBank:WP_059586145.1;Name=WP_059586145.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548291.1;locus_tag=LDO49_RS18010;product=GGDEF domain-containing protein;protein_id=WP_059586145.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 23828 24898 . + . ID=gene-LDO49_RS18015;Name=LDO49_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18015;old_locus_tag=BCEP4_240026 NZ_CAJZAV010000157.1 Protein Homology CDS 23828 24898 . + 0 ID=cds-WP_224052121.1;Parent=gene-LDO49_RS18015;Dbxref=GenBank:WP_224052121.1;Name=WP_224052121.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338564.1;locus_tag=LDO49_RS18015;product=FUSC family protein;protein_id=WP_224052121.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 25227 26561 . + . ID=gene-LDO49_RS18020;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=LDO49_RS18020;old_locus_tag=BCEP4_240027 NZ_CAJZAV010000157.1 Protein Homology CDS 25227 26561 . + 0 ID=cds-WP_021157353.1;Parent=gene-LDO49_RS18020;Dbxref=GenBank:WP_021157353.1;Name=WP_021157353.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355992.1;locus_tag=LDO49_RS18020;product=argininosuccinate synthase;protein_id=WP_021157353.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 26785 27282 . + . ID=gene-LDO49_RS18025;Name=LDO49_RS18025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18025;old_locus_tag=BCEP4_240028 NZ_CAJZAV010000157.1 Protein Homology CDS 26785 27282 . + 0 ID=cds-WP_224052122.1;Parent=gene-LDO49_RS18025;Dbxref=GenBank:WP_224052122.1;Name=WP_224052122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487487.1;locus_tag=LDO49_RS18025;product=shikimate kinase;protein_id=WP_224052122.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 27334 27468 . + . ID=gene-LDO49_RS37320;Name=LDO49_RS37320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37320;old_locus_tag=BCEP4_240029 NZ_CAJZAV010000157.1 GeneMarkS-2+ CDS 27334 27468 . + 0 ID=cds-WP_290369862.1;Parent=gene-LDO49_RS37320;Dbxref=GenBank:WP_290369862.1;Name=WP_290369862.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37320;product=hypothetical protein;protein_id=WP_290369862.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 27536 28846 . - . ID=gene-LDO49_RS18030;Name=LDO49_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18030;old_locus_tag=BCEP4_240030 NZ_CAJZAV010000157.1 Protein Homology CDS 27536 28846 . - 0 ID=cds-WP_224052124.1;Parent=gene-LDO49_RS18030;Dbxref=GenBank:WP_224052124.1;Name=WP_224052124.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487485.1;locus_tag=LDO49_RS18030;product=MFS transporter;protein_id=WP_224052124.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 29055 30137 . - . ID=gene-LDO49_RS18035;Name=LDO49_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18035;old_locus_tag=BCEP4_240031 NZ_CAJZAV010000157.1 Protein Homology CDS 29055 30137 . - 0 ID=cds-WP_060331910.1;Parent=gene-LDO49_RS18035;Dbxref=GenBank:WP_060331910.1;Name=WP_060331910.1;Ontology_term=GO:0046395,GO:0009027,GO:0051287;gbkey=CDS;go_function=tartrate dehydrogenase activity|0009027||IEA,NAD binding|0051287||IEA;go_process=carboxylic acid catabolic process|0046395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411801.1;locus_tag=LDO49_RS18035;product=tartrate dehydrogenase;protein_id=WP_060331910.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 30246 31166 . + . ID=gene-LDO49_RS18040;Name=LDO49_RS18040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18040;old_locus_tag=BCEP4_240032 NZ_CAJZAV010000157.1 Protein Homology CDS 30246 31166 . + 0 ID=cds-WP_224052126.1;Parent=gene-LDO49_RS18040;Dbxref=GenBank:WP_224052126.1;Name=WP_224052126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490478.1;locus_tag=LDO49_RS18040;product=LysR substrate-binding domain-containing protein;protein_id=WP_224052126.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 31355 31867 . + . ID=gene-LDO49_RS18045;Name=LDO49_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18045;old_locus_tag=BCEP4_240033 NZ_CAJZAV010000157.1 Protein Homology CDS 31355 31867 . + 0 ID=cds-WP_021157360.1;Parent=gene-LDO49_RS18045;Dbxref=GenBank:WP_021157360.1;Name=WP_021157360.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006159281.1;locus_tag=LDO49_RS18045;product=helix-turn-helix domain-containing protein;protein_id=WP_021157360.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 31864 33135 . + . ID=gene-LDO49_RS18050;Name=LDO49_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18050;old_locus_tag=BCEP4_240034 NZ_CAJZAV010000157.1 Protein Homology CDS 31864 33135 . + 0 ID=cds-WP_021157361.1;Parent=gene-LDO49_RS18050;Dbxref=GenBank:WP_021157361.1;Name=WP_021157361.1;Ontology_term=GO:0016310,GO:0004674,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008167780.1;locus_tag=LDO49_RS18050;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_021157361.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 33161 34162 . - . ID=gene-LDO49_RS18055;Name=LDO49_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18055;old_locus_tag=BCEP4_240035 NZ_CAJZAV010000157.1 Protein Homology CDS 33161 34162 . - 0 ID=cds-WP_060331912.1;Parent=gene-LDO49_RS18055;Dbxref=GenBank:WP_060331912.1;Name=WP_060331912.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467803.1;locus_tag=LDO49_RS18055;product=LysR family transcriptional regulator;protein_id=WP_060331912.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 34262 34681 . - . ID=gene-LDO49_RS18060;Name=LDO49_RS18060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18060;old_locus_tag=BCEP4_240036 NZ_CAJZAV010000157.1 Protein Homology CDS 34262 34681 . - 0 ID=cds-WP_060071248.1;Parent=gene-LDO49_RS18060;Dbxref=GenBank:WP_060071248.1;Name=WP_060071248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355996.1;locus_tag=LDO49_RS18060;product=hypothetical protein;protein_id=WP_060071248.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 34813 35613 . - . ID=gene-LDO49_RS18065;Name=LDO49_RS18065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18065;old_locus_tag=BCEP4_240037 NZ_CAJZAV010000157.1 Protein Homology CDS 34813 35613 . - 0 ID=cds-WP_042973320.1;Parent=gene-LDO49_RS18065;Dbxref=GenBank:WP_042973320.1;Name=WP_042973320.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548299.1;locus_tag=LDO49_RS18065;product=AraC family transcriptional regulator;protein_id=WP_042973320.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 35807 36433 . + . ID=gene-LDO49_RS18070;Name=LDO49_RS18070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18070;old_locus_tag=BCEP4_240038 NZ_CAJZAV010000157.1 Protein Homology CDS 35807 36433 . + 0 ID=cds-WP_021157365.1;Parent=gene-LDO49_RS18070;Dbxref=GenBank:WP_021157365.1;Name=WP_021157365.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355998.1;locus_tag=LDO49_RS18070;product=LysE family translocator;protein_id=WP_021157365.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 36447 37211 . + . ID=gene-LDO49_RS18075;Name=LDO49_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18075;old_locus_tag=BCEP4_240039 NZ_CAJZAV010000157.1 Protein Homology CDS 36447 37211 . + 0 ID=cds-WP_224052128.1;Parent=gene-LDO49_RS18075;Dbxref=GenBank:WP_224052128.1;Name=WP_224052128.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766900.1;locus_tag=LDO49_RS18075;product=class I SAM-dependent methyltransferase;protein_id=WP_224052128.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 37231 37920 . - . ID=gene-LDO49_RS18080;Name=LDO49_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18080;old_locus_tag=BCEP4_240040 NZ_CAJZAV010000157.1 Protein Homology CDS 37231 37920 . - 0 ID=cds-WP_059493660.1;Parent=gene-LDO49_RS18080;Dbxref=GenBank:WP_059493660.1;Name=WP_059493660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338572.1;locus_tag=LDO49_RS18080;product=DUF2848 domain-containing protein;protein_id=WP_059493660.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 37992 38378 . - . ID=gene-LDO49_RS18085;Name=LDO49_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18085;old_locus_tag=BCEP4_240041 NZ_CAJZAV010000157.1 Protein Homology CDS 37992 38378 . - 0 ID=cds-WP_048022440.1;Parent=gene-LDO49_RS18085;Dbxref=GenBank:WP_048022440.1;Name=WP_048022440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338573.1;locus_tag=LDO49_RS18085;product=hypothetical protein;protein_id=WP_048022440.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 38427 39905 . - . ID=gene-LDO49_RS18090;Name=LDO49_RS18090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18090;old_locus_tag=BCEP4_240042 NZ_CAJZAV010000157.1 Protein Homology CDS 38427 39905 . - 0 ID=cds-WP_059622381.1;Parent=gene-LDO49_RS18090;Dbxref=GenBank:WP_059622381.1;Name=WP_059622381.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490471.1;locus_tag=LDO49_RS18090;product=4-hydroxyphenylacetate 3-hydroxylase family protein;protein_id=WP_059622381.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 39942 40490 . - . ID=gene-LDO49_RS18095;Name=LDO49_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18095;old_locus_tag=BCEP4_240043 NZ_CAJZAV010000157.1 Protein Homology CDS 39942 40490 . - 0 ID=cds-WP_224052129.1;Parent=gene-LDO49_RS18095;Dbxref=GenBank:WP_224052129.1;Name=WP_224052129.1;Ontology_term=GO:0010181,GO:0016491,GO:0016646;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors%2C NAD or NADP as acceptor|0016646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356004.1;locus_tag=LDO49_RS18095;product=flavin reductase family protein;protein_id=WP_224052129.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 40746 41957 . + . ID=gene-LDO49_RS18100;Name=LDO49_RS18100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18100;old_locus_tag=BCEP4_240045 NZ_CAJZAV010000157.1 Protein Homology CDS 40746 41957 . + 0 ID=cds-WP_224052130.1;Parent=gene-LDO49_RS18100;Dbxref=GenBank:WP_224052130.1;Name=WP_224052130.1;Ontology_term=GO:0044571,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=[2Fe-2S] cluster assembly|0044571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338576.1;locus_tag=LDO49_RS18100;product=IscS subfamily cysteine desulfurase;protein_id=WP_224052130.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 41997 42539 . - . ID=gene-LDO49_RS18105;Name=LDO49_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18105;old_locus_tag=BCEP4_240046 NZ_CAJZAV010000157.1 Protein Homology CDS 41997 42539 . - 0 ID=cds-WP_027790922.1;Parent=gene-LDO49_RS18105;Dbxref=GenBank:WP_027790922.1;Name=WP_027790922.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548306.1;locus_tag=LDO49_RS18105;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_027790922.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 42668 43258 . + . ID=gene-LDO49_RS18110;Name=LDO49_RS18110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18110;old_locus_tag=BCEP4_240047 NZ_CAJZAV010000157.1 Protein Homology CDS 42668 43258 . + 0 ID=cds-WP_224052131.1;Parent=gene-LDO49_RS18110;Dbxref=GenBank:WP_224052131.1;Name=WP_224052131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479615.1;locus_tag=LDO49_RS18110;product=nuclear transport factor 2 family protein;protein_id=WP_224052131.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 43284 43793 . - . ID=gene-LDO49_RS18115;Name=LDO49_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18115;old_locus_tag=BCEP4_240048 NZ_CAJZAV010000157.1 Protein Homology CDS 43284 43793 . - 0 ID=cds-WP_224052132.1;Parent=gene-LDO49_RS18115;Dbxref=GenBank:WP_224052132.1;Name=WP_224052132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490472.1;locus_tag=LDO49_RS18115;product=SUKH-3 domain-containing protein;protein_id=WP_224052132.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 43876 45495 . - . ID=gene-LDO49_RS18120;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=LDO49_RS18120;old_locus_tag=BCEP4_240049 NZ_CAJZAV010000157.1 Protein Homology CDS 43876 45495 . - 0 ID=cds-WP_224052133.1;Parent=gene-LDO49_RS18120;Dbxref=GenBank:WP_224052133.1;Name=WP_224052133.1;Ontology_term=GO:0006355,GO:0003700,GO:0005524,GO:0008134;gbkey=CDS;gene=rtcR;go_function=DNA-binding transcription factor activity|0003700||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330396.1;locus_tag=LDO49_RS18120;product=RNA repair transcriptional activator RtcR;protein_id=WP_224052133.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 45832 45904 . + . ID=gene-LDO49_RS18125;Name=LDO49_RS18125;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS18125;old_locus_tag=BCEP4_TRNA10 NZ_CAJZAV010000157.1 tRNAscan-SE tRNA 45832 45904 . + . ID=rna-LDO49_RS18125;Parent=gene-LDO49_RS18125;anticodon=(pos:45865..45867);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS18125;product=tRNA-Cys NZ_CAJZAV010000157.1 tRNAscan-SE exon 45832 45904 . + . ID=exon-LDO49_RS18125-1;Parent=rna-LDO49_RS18125;anticodon=(pos:45865..45867);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS18125;product=tRNA-Cys NZ_CAJZAV010000157.1 RefSeq gene 46163 47302 . + . ID=gene-LDO49_RS18130;Name=LDO49_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18130;old_locus_tag=BCEP4_240050 NZ_CAJZAV010000157.1 Protein Homology CDS 46163 47302 . + 0 ID=cds-WP_060071226.1;Parent=gene-LDO49_RS18130;Dbxref=GenBank:WP_060071226.1;Name=WP_060071226.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365467.1;locus_tag=LDO49_RS18130;product=slipin family protein;protein_id=WP_060071226.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 47365 48588 . + . ID=gene-LDO49_RS18135;Name=LDO49_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18135;old_locus_tag=BCEP4_240051 NZ_CAJZAV010000157.1 Protein Homology CDS 47365 48588 . + 0 ID=cds-WP_290369863.1;Parent=gene-LDO49_RS18135;Dbxref=GenBank:WP_290369863.1;Name=WP_290369863.1;Ontology_term=GO:0006396,GO:0008452;gbkey=CDS;go_function=RNA ligase activity|0008452||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338582.1;locus_tag=LDO49_RS18135;product=RtcB family protein;protein_id=WP_290369863.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 48646 49458 . + . ID=gene-LDO49_RS18140;Name=LDO49_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18140;old_locus_tag=BCEP4_240052 NZ_CAJZAV010000157.1 Protein Homology CDS 48646 49458 . + 0 ID=cds-WP_060071223.1;Parent=gene-LDO49_RS18140;Dbxref=GenBank:WP_060071223.1;Name=WP_060071223.1;Ontology_term=GO:0000166,GO:0016779,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleotidyltransferase activity|0016779||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356011.1;locus_tag=LDO49_RS18140;product=nucleotidyltransferase domain-containing protein;protein_id=WP_060071223.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 49720 50868 . + . ID=gene-LDO49_RS18145;Name=LDO49_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18145;old_locus_tag=BCEP4_240053 NZ_CAJZAV010000157.1 Protein Homology CDS 49720 50868 . + 0 ID=cds-WP_060071220.1;Parent=gene-LDO49_RS18145;Dbxref=GenBank:WP_060071220.1;Name=WP_060071220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356012.1;locus_tag=LDO49_RS18145;product=DUF1176 domain-containing protein;protein_id=WP_060071220.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 50930 52234 . + . ID=gene-LDO49_RS18150;Name=LDO49_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18150;old_locus_tag=BCEP4_240054 NZ_CAJZAV010000157.1 Protein Homology CDS 50930 52234 . + 0 ID=cds-WP_060071216.1;Parent=gene-LDO49_RS18150;Dbxref=GenBank:WP_060071216.1;Name=WP_060071216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496080.1;locus_tag=LDO49_RS18150;product=XAC2610-related protein;protein_id=WP_060071216.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 52271 52939 . - . ID=gene-LDO49_RS18155;Name=LDO49_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18155;old_locus_tag=BCEP4_240055 NZ_CAJZAV010000157.1 Protein Homology CDS 52271 52939 . - 0 ID=cds-WP_060050765.1;Parent=gene-LDO49_RS18155;Dbxref=GenBank:WP_060050765.1;Name=WP_060050765.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004528605.1;locus_tag=LDO49_RS18155;product=O-methyltransferase;protein_id=WP_060050765.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 53072 54367 . + . ID=gene-LDO49_RS18160;Name=LDO49_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18160;old_locus_tag=BCEP4_240056 NZ_CAJZAV010000157.1 Protein Homology CDS 53072 54367 . + 0 ID=cds-WP_021157380.1;Parent=gene-LDO49_RS18160;Dbxref=GenBank:WP_021157380.1;Name=WP_021157380.1;Ontology_term=GO:0019346,GO:0016765,GO:0030170;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188263.1;locus_tag=LDO49_RS18160;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein;protein_id=WP_021157380.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 54550 55275 . + . ID=gene-LDO49_RS18165;Name=LDO49_RS18165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18165;old_locus_tag=BCEP4_240057 NZ_CAJZAV010000157.1 Protein Homology CDS 54550 55275 . + 0 ID=cds-WP_059857310.1;Parent=gene-LDO49_RS18165;Dbxref=GenBank:WP_059857310.1;Name=WP_059857310.1;Ontology_term=GO:0030001,GO:0055085,GO:0046873;gbkey=CDS;go_function=metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479624.1;locus_tag=LDO49_RS18165;product=ZIP family metal transporter;protein_id=WP_059857310.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 55298 55801 . - . ID=gene-LDO49_RS18170;Name=LDO49_RS18170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18170;old_locus_tag=BCEP4_240058 NZ_CAJZAV010000157.1 Protein Homology CDS 55298 55801 . - 0 ID=cds-WP_060071213.1;Parent=gene-LDO49_RS18170;Dbxref=GenBank:WP_060071213.1;Name=WP_060071213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009693532.1;locus_tag=LDO49_RS18170;product=hypothetical protein;protein_id=WP_060071213.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 55867 56142 . - . ID=gene-LDO49_RS18175;Name=LDO49_RS18175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18175;old_locus_tag=BCEP4_240059 NZ_CAJZAV010000157.1 Protein Homology CDS 55867 56142 . - 0 ID=cds-WP_021157383.1;Parent=gene-LDO49_RS18175;Dbxref=GenBank:WP_021157383.1;Name=WP_021157383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356018.1;locus_tag=LDO49_RS18175;product=DUF4148 domain-containing protein;protein_id=WP_021157383.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 56460 57620 . + . ID=gene-LDO49_RS18180;Name=LDO49_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18180;old_locus_tag=BCEP4_240060 NZ_CAJZAV010000157.1 Protein Homology CDS 56460 57620 . + 0 ID=cds-WP_060071209.1;Parent=gene-LDO49_RS18180;Dbxref=GenBank:WP_060071209.1;Name=WP_060071209.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356019.1;locus_tag=LDO49_RS18180;product=porin;protein_id=WP_060071209.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 57931 58278 . - . ID=gene-LDO49_RS18185;Name=LDO49_RS18185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18185;old_locus_tag=BCEP4_240061 NZ_CAJZAV010000157.1 Protein Homology CDS 57931 58278 . - 0 ID=cds-WP_224052134.1;Parent=gene-LDO49_RS18185;Dbxref=GenBank:WP_224052134.1;Name=WP_224052134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010098879.1;locus_tag=LDO49_RS18185;product=hypothetical protein;protein_id=WP_224052134.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 58485 58772 . + . ID=gene-LDO49_RS18190;Name=LDO49_RS18190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18190;old_locus_tag=BCEP4_240062 NZ_CAJZAV010000157.1 Protein Homology CDS 58485 58772 . + 0 ID=cds-WP_021157386.1;Parent=gene-LDO49_RS18190;Dbxref=GenBank:WP_021157386.1;Name=WP_021157386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479629.1;locus_tag=LDO49_RS18190;product=DUF4148 domain-containing protein;protein_id=WP_021157386.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 58852 60276 . - . ID=gene-LDO49_RS18195;Name=LDO49_RS18195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18195;old_locus_tag=BCEP4_240063 NZ_CAJZAV010000157.1 Protein Homology CDS 58852 60276 . - 0 ID=cds-WP_060058938.1;Parent=gene-LDO49_RS18195;Dbxref=GenBank:WP_060058938.1;Name=WP_060058938.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548322.1;locus_tag=LDO49_RS18195;product=heavy metal sensor histidine kinase;protein_id=WP_060058938.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 60273 60956 . - . ID=gene-LDO49_RS18200;Name=irlR;gbkey=Gene;gene=irlR;gene_biotype=protein_coding;locus_tag=LDO49_RS18200;old_locus_tag=BCEP4_240064 NZ_CAJZAV010000157.1 Protein Homology CDS 60273 60956 . - 0 ID=cds-WP_021157388.1;Parent=gene-LDO49_RS18200;Dbxref=GenBank:WP_021157388.1;Name=WP_021157388.1;gbkey=CDS;gene=irlR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490455.1;locus_tag=LDO49_RS18200;product=heavy metal response regulator transcription factor IrlR;protein_id=WP_021157388.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 60956 64180 . - . ID=gene-LDO49_RS18205;Name=LDO49_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18205;old_locus_tag=BCEP4_240065 NZ_CAJZAV010000157.1 Protein Homology CDS 60956 64180 . - 0 ID=cds-WP_059484170.1;Parent=gene-LDO49_RS18205;Dbxref=GenBank:WP_059484170.1;Name=WP_059484170.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548324.1;locus_tag=LDO49_RS18205;product=efflux RND transporter permease subunit;protein_id=WP_059484170.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 64318 65793 . - . ID=gene-LDO49_RS18210;Name=LDO49_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18210;old_locus_tag=BCEP4_240066 NZ_CAJZAV010000157.1 Protein Homology CDS 64318 65793 . - 0 ID=cds-WP_060071206.1;Parent=gene-LDO49_RS18210;Dbxref=GenBank:WP_060071206.1;Name=WP_060071206.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493151.1;locus_tag=LDO49_RS18210;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_060071206.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 65828 67165 . - . ID=gene-LDO49_RS18215;Name=LDO49_RS18215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18215;old_locus_tag=BCEP4_240067 NZ_CAJZAV010000157.1 Protein Homology CDS 65828 67165 . - 0 ID=cds-WP_060071203.1;Parent=gene-LDO49_RS18215;Dbxref=GenBank:WP_060071203.1;Name=WP_060071203.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356026.1;locus_tag=LDO49_RS18215;product=TolC family protein;protein_id=WP_060071203.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 67536 68288 . - . ID=gene-LDO49_RS18220;Name=LDO49_RS18220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18220;old_locus_tag=BCEP4_240069 NZ_CAJZAV010000157.1 Protein Homology CDS 67536 68288 . - 0 ID=cds-WP_081067220.1;Parent=gene-LDO49_RS18220;Dbxref=GenBank:WP_081067220.1;Name=WP_081067220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010096051.1;locus_tag=LDO49_RS18220;product=hypothetical protein;protein_id=WP_081067220.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 68302 68988 . - . ID=gene-LDO49_RS18225;Name=LDO49_RS18225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18225;old_locus_tag=BCEP4_240070 NZ_CAJZAV010000157.1 Protein Homology CDS 68302 68988 . - 0 ID=cds-WP_081058622.1;Parent=gene-LDO49_RS18225;Dbxref=GenBank:WP_081058622.1;Name=WP_081058622.1;Ontology_term=GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: protein motif:HMM:NF025874.6;locus_tag=LDO49_RS18225;product=M35 family metallo-endopeptidase;protein_id=WP_081058622.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 68994 69536 . - . ID=gene-LDO49_RS18230;Name=LDO49_RS18230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18230;old_locus_tag=BCEP4_240071 NZ_CAJZAV010000157.1 Protein Homology CDS 68994 69536 . - 0 ID=cds-WP_059484173.1;Parent=gene-LDO49_RS18230;Dbxref=GenBank:WP_059484173.1;Name=WP_059484173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749997.1;locus_tag=LDO49_RS18230;product=hypothetical protein;protein_id=WP_059484173.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 69533 70216 . - . ID=gene-LDO49_RS18235;Name=LDO49_RS18235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18235;old_locus_tag=BCEP4_240072 NZ_CAJZAV010000157.1 Protein Homology CDS 69533 70216 . - 0 ID=cds-WP_060071200.1;Parent=gene-LDO49_RS18235;Dbxref=GenBank:WP_060071200.1;Name=WP_060071200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749996.1;locus_tag=LDO49_RS18235;product=PAAR domain-containing protein;protein_id=WP_060071200.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 70807 71997 . - . ID=gene-LDO49_RS18240;Name=LDO49_RS18240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18240;old_locus_tag=BCEP4_240075 NZ_CAJZAV010000157.1 Protein Homology CDS 70807 71997 . - 0 ID=cds-WP_059586125.1;Parent=gene-LDO49_RS18240;Dbxref=GenBank:WP_059586125.1;Name=WP_059586125.1;Ontology_term=GO:0016310,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496091.1;locus_tag=LDO49_RS18240;product=phosphotransferase enzyme family protein;protein_id=WP_059586125.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 72034 72666 . - . ID=gene-LDO49_RS18245;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=LDO49_RS18245;old_locus_tag=BCEP4_240076 NZ_CAJZAV010000157.1 Protein Homology CDS 72034 72666 . - 0 ID=cds-WP_021157393.1;Parent=gene-LDO49_RS18245;Dbxref=GenBank:WP_021157393.1;Name=WP_021157393.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356028.1;locus_tag=LDO49_RS18245;product=nicotinamide riboside transporter PnuC;protein_id=WP_021157393.1;transl_table=11 NZ_CAJZAV010000157.1 RefSeq gene 72726 74807 . - . ID=gene-LDO49_RS18250;Name=LDO49_RS18250;end_range=74807,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18250;old_locus_tag=BCEP4_240077;partial=true NZ_CAJZAV010000157.1 Protein Homology CDS 72726 74807 . - 0 ID=cds-WP_224052135.1;Parent=gene-LDO49_RS18250;Dbxref=GenBank:WP_224052135.1;Name=WP_224052135.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;end_range=74807,.;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750788.1;locus_tag=LDO49_RS18250;partial=true;product=TonB-dependent siderophore receptor;protein_id=WP_224052135.1;transl_table=11 ##sequence-region NZ_CAJZAV010000158.1 1 13296 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000158.1 RefSeq region 1 13296 . + . ID=NZ_CAJZAV010000158.1:1..13296;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_240 NZ_CAJZAV010000158.1 RefSeq gene 1 531 . + . ID=gene-LDO49_RS18255;Name=LDO49_RS18255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18255;old_locus_tag=BCEP4_2400001;partial=true;start_range=.,1 NZ_CAJZAV010000158.1 Protein Homology CDS 1 531 . + 0 ID=cds-WP_224052140.1;Parent=gene-LDO49_RS18255;Dbxref=GenBank:WP_224052140.1;Name=WP_224052140.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213361.1;locus_tag=LDO49_RS18255;partial=true;product=GNAT family N-acetyltransferase;protein_id=WP_224052140.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000158.1 RefSeq gene 564 1919 . + . ID=gene-LDO49_RS18260;Name=LDO49_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18260;old_locus_tag=BCEP4_2400002 NZ_CAJZAV010000158.1 Protein Homology CDS 564 1919 . + 0 ID=cds-WP_060330707.1;Parent=gene-LDO49_RS18260;Dbxref=GenBank:WP_060330707.1;Name=WP_060330707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755667.1;locus_tag=LDO49_RS18260;product=lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family protein;protein_id=WP_060330707.1;transl_table=11 NZ_CAJZAV010000158.1 RefSeq gene 1942 4191 . + . ID=gene-LDO49_RS18265;Name=LDO49_RS18265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18265;old_locus_tag=BCEP4_2400003 NZ_CAJZAV010000158.1 Protein Homology CDS 1942 4191 . + 0 ID=cds-WP_224052141.1;Parent=gene-LDO49_RS18265;Dbxref=GenBank:WP_224052141.1;Name=WP_224052141.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328461.1;locus_tag=LDO49_RS18265;product=TonB-dependent siderophore receptor;protein_id=WP_224052141.1;transl_table=11 NZ_CAJZAV010000158.1 RefSeq gene 4278 5117 . + . ID=gene-LDO49_RS18270;Name=LDO49_RS18270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18270;old_locus_tag=BCEP4_2400004 NZ_CAJZAV010000158.1 Protein Homology CDS 4278 5117 . + 0 ID=cds-WP_042975471.1;Parent=gene-LDO49_RS18270;Dbxref=GenBank:WP_042975471.1;Name=WP_042975471.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213359.1;locus_tag=LDO49_RS18270;product=formyltransferase family protein;protein_id=WP_042975471.1;transl_table=11 NZ_CAJZAV010000158.1 RefSeq gene 5117 6133 . + . ID=gene-LDO49_RS18275;Name=LDO49_RS18275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18275;old_locus_tag=BCEP4_2400005 NZ_CAJZAV010000158.1 Protein Homology CDS 5117 6133 . + 0 ID=cds-WP_224052142.1;Parent=gene-LDO49_RS18275;Dbxref=GenBank:WP_224052142.1;Name=WP_224052142.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328462.1;locus_tag=LDO49_RS18275;product=GNAT family N-acetyltransferase;protein_id=WP_224052142.1;transl_table=11 NZ_CAJZAV010000158.1 RefSeq gene 6384 6644 . + . ID=gene-LDO49_RS18280;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=LDO49_RS18280;old_locus_tag=BCEP4_2400006 NZ_CAJZAV010000158.1 Protein Homology CDS 6384 6644 . + 0 ID=cds-WP_021160097.1;Parent=gene-LDO49_RS18280;Dbxref=GenBank:WP_021160097.1;Name=WP_021160097.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092407.1;locus_tag=LDO49_RS18280;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_021160097.1;transl_table=11 NZ_CAJZAV010000158.1 RefSeq gene 6641 7057 . + . ID=gene-LDO49_RS18285;Name=LDO49_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18285;old_locus_tag=BCEP4_2400007 NZ_CAJZAV010000158.1 Protein Homology CDS 6641 7057 . + 0 ID=cds-WP_021160096.1;Parent=gene-LDO49_RS18285;Dbxref=GenBank:WP_021160096.1;Name=WP_021160096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656832.1;locus_tag=LDO49_RS18285;product=PIN domain-containing protein;protein_id=WP_021160096.1;transl_table=11 NZ_CAJZAV010000158.1 RefSeq pseudogene 7106 8004 . - . ID=gene-LDO49_RS18290;Name=LDO49_RS18290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS18290;old_locus_tag=BCEP4_2400008;pseudo=true NZ_CAJZAV010000158.1 Protein Homology CDS 7106 8004 . - 0 ID=cds-LDO49_RS18290;Parent=gene-LDO49_RS18290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762019.1;locus_tag=LDO49_RS18290;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;pseudo=true;transl_table=11 NZ_CAJZAV010000158.1 RefSeq gene 7973 9046 . - . ID=gene-LDO49_RS18295;Name=LDO49_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18295;old_locus_tag=BCEP4_2400009 NZ_CAJZAV010000158.1 Protein Homology CDS 7973 9046 . - 0 ID=cds-WP_059653445.1;Parent=gene-LDO49_RS18295;Dbxref=GenBank:WP_059653445.1;Name=WP_059653445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897058.1;locus_tag=LDO49_RS18295;product=type IV toxin-antitoxin system AbiEi family antitoxin;protein_id=WP_059653445.1;transl_table=11 NZ_CAJZAV010000158.1 RefSeq gene 9388 10551 . + . ID=gene-LDO49_RS18300;Name=LDO49_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18300;old_locus_tag=BCEP4_2400010 NZ_CAJZAV010000158.1 Protein Homology CDS 9388 10551 . + 0 ID=cds-WP_059484570.1;Parent=gene-LDO49_RS18300;Dbxref=GenBank:WP_059484570.1;Name=WP_059484570.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328465.1;locus_tag=LDO49_RS18300;product=M20 aminoacylase family protein;protein_id=WP_059484570.1;transl_table=11 NZ_CAJZAV010000158.1 RefSeq gene 10795 11334 . + . ID=gene-LDO49_RS18305;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=LDO49_RS18305;old_locus_tag=BCEP4_2400011 NZ_CAJZAV010000158.1 Protein Homology CDS 10795 11334 . + 0 ID=cds-WP_224052143.1;Parent=gene-LDO49_RS18305;Dbxref=GenBank:WP_224052143.1;Name=WP_224052143.1;Ontology_term=GO:0019867;gbkey=CDS;gene=bamE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008351377.1;locus_tag=LDO49_RS18305;product=outer membrane protein assembly factor BamE domain-containing protein;protein_id=WP_224052143.1;transl_table=11 NZ_CAJZAV010000158.1 RefSeq gene 11362 12666 . - . ID=gene-LDO49_RS18310;Name=LDO49_RS18310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18310;old_locus_tag=BCEP4_2400012 NZ_CAJZAV010000158.1 Protein Homology CDS 11362 12666 . - 0 ID=cds-WP_224052144.1;Parent=gene-LDO49_RS18310;Dbxref=GenBank:WP_224052144.1;Name=WP_224052144.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496450.1;locus_tag=LDO49_RS18310;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_224052144.1;transl_table=11 NZ_CAJZAV010000158.1 RefSeq gene 12669 12935 . - . ID=gene-LDO49_RS18315;Name=LDO49_RS18315;end_range=12935,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18315;old_locus_tag=BCEP4_2400013;partial=true NZ_CAJZAV010000158.1 Protein Homology CDS 12669 12935 . - 0 ID=cds-WP_443797976.1;Parent=gene-LDO49_RS18315;Dbxref=GenBank:WP_443797976.1;Name=WP_443797976.1;Ontology_term=GO:0005524,GO:0008817;end_range=12935,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,corrinoid adenosyltransferase activity|0008817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018442736.1;locus_tag=LDO49_RS18315;partial=true;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_443797976.1;transl_table=11 NZ_CAJZAV010000158.1 RefSeq pseudogene 12946 13057 . - . ID=gene-LDO49_RS38170;Name=LDO49_RS38170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38170;old_locus_tag=BCEP4_2400014;partial=true;pseudo=true;start_range=.,12946 NZ_CAJZAV010000158.1 Protein Homology CDS 12946 13057 . - 0 ID=cds-LDO49_RS38170;Parent=gene-LDO49_RS38170;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018442736.1;locus_tag=LDO49_RS38170;partial=true;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;pseudo=true;start_range=.,12946;transl_table=11 NZ_CAJZAV010000158.1 RefSeq gene 13095 13296 . - . ID=gene-LDO49_RS18320;Name=LDO49_RS18320;end_range=13296,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18320;old_locus_tag=BCEP4_2400015;partial=true NZ_CAJZAV010000158.1 Protein Homology CDS 13095 13296 . - 1 ID=cds-WP_224052146.1;Parent=gene-LDO49_RS18320;Dbxref=GenBank:WP_224052146.1;Name=WP_224052146.1;Ontology_term=GO:0009236;end_range=13296,.;gbkey=CDS;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545388.1;locus_tag=LDO49_RS18320;partial=true;product=cobalamin biosynthesis protein;protein_id=WP_224052146.1;transl_table=11 ##sequence-region NZ_CAJZAV010000159.1 1 4678 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000159.1 RefSeq region 1 4678 . + . ID=NZ_CAJZAV010000159.1:1..4678;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_241 NZ_CAJZAV010000159.1 RefSeq gene 1 441 . + . ID=gene-LDO49_RS18325;Name=LDO49_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18325;old_locus_tag=BCEP4_2410001;partial=true;start_range=.,1 NZ_CAJZAV010000159.1 Protein Homology CDS 1 441 . + 0 ID=cds-WP_224052148.1;Parent=gene-LDO49_RS18325;Dbxref=GenBank:WP_224052148.1;Name=WP_224052148.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364080.1;locus_tag=LDO49_RS18325;partial=true;product=glycerate kinase;protein_id=WP_224052148.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000159.1 RefSeq gene 504 953 . + . ID=gene-LDO49_RS18330;Name=LDO49_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18330;old_locus_tag=BCEP4_2410002 NZ_CAJZAV010000159.1 Protein Homology CDS 504 953 . + 0 ID=cds-WP_021160399.1;Parent=gene-LDO49_RS18330;Dbxref=GenBank:WP_021160399.1;Name=WP_021160399.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478574.1;locus_tag=LDO49_RS18330;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_021160399.1;transl_table=11 NZ_CAJZAV010000159.1 RefSeq gene 1124 2122 . - . ID=gene-LDO49_RS18335;Name=LDO49_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18335;old_locus_tag=BCEP4_2410003 NZ_CAJZAV010000159.1 Protein Homology CDS 1124 2122 . - 0 ID=cds-WP_224052150.1;Parent=gene-LDO49_RS18335;Dbxref=GenBank:WP_224052150.1;Name=WP_224052150.1;Ontology_term=GO:0015940,GO:0008677,GO:0050661;gbkey=CDS;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA,NADP binding|0050661||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213186.1;locus_tag=LDO49_RS18335;product=2-dehydropantoate 2-reductase;protein_id=WP_224052150.1;transl_table=11 NZ_CAJZAV010000159.1 RefSeq gene 2222 3367 . - . ID=gene-LDO49_RS18340;Name=LDO49_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18340;old_locus_tag=BCEP4_2410004 NZ_CAJZAV010000159.1 Protein Homology CDS 2222 3367 . - 0 ID=cds-WP_224052152.1;Parent=gene-LDO49_RS18340;Dbxref=GenBank:WP_224052152.1;Name=WP_224052152.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213185.1;locus_tag=LDO49_RS18340;product=helix-turn-helix transcriptional regulator;protein_id=WP_224052152.1;transl_table=11 NZ_CAJZAV010000159.1 RefSeq gene 3670 4678 . + . ID=gene-LDO49_RS18345;Name=LDO49_RS18345;end_range=4678,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18345;partial=true NZ_CAJZAV010000159.1 Protein Homology CDS 3670 4678 . + 0 ID=cds-WP_224052154.1;Parent=gene-LDO49_RS18345;Dbxref=GenBank:WP_224052154.1;Name=WP_224052154.1;Ontology_term=GO:0015288,GO:0009279;end_range=4678,.;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328705.1;locus_tag=LDO49_RS18345;partial=true;product=porin;protein_id=WP_224052154.1;transl_table=11 ##sequence-region NZ_CAJZAV010000160.1 1 4556 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000160.1 RefSeq region 1 4556 . + . ID=NZ_CAJZAV010000160.1:1..4556;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_242 NZ_CAJZAV010000160.1 RefSeq pseudogene 70 295 . + . ID=gene-LDO49_RS38175;Name=LDO49_RS38175;end_range=295,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38175;old_locus_tag=BCEP4_2420001;partial=true;pseudo=true NZ_CAJZAV010000160.1 Protein Homology CDS 70 295 . + 0 ID=cds-LDO49_RS38175;Parent=gene-LDO49_RS38175;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=295,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498323.1;locus_tag=LDO49_RS38175;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAV010000160.1 RefSeq gene 468 1016 . + . ID=gene-LDO49_RS18355;Name=LDO49_RS18355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18355;old_locus_tag=BCEP4_2420002 NZ_CAJZAV010000160.1 Protein Homology CDS 468 1016 . + 0 ID=cds-WP_021164229.1;Parent=gene-LDO49_RS18355;Dbxref=GenBank:WP_021164229.1;Name=WP_021164229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660511.1;locus_tag=LDO49_RS18355;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_021164229.1;transl_table=11 NZ_CAJZAV010000160.1 RefSeq gene 1021 1353 . + . ID=gene-LDO49_RS18360;Name=LDO49_RS18360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18360;old_locus_tag=BCEP4_2420003 NZ_CAJZAV010000160.1 Protein Homology CDS 1021 1353 . + 0 ID=cds-WP_060147858.1;Parent=gene-LDO49_RS18360;Dbxref=GenBank:WP_060147858.1;Name=WP_060147858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761778.1;locus_tag=LDO49_RS18360;product=DUF1488 domain-containing protein;protein_id=WP_060147858.1;transl_table=11 NZ_CAJZAV010000160.1 RefSeq gene 1610 1855 . + . ID=gene-LDO49_RS18365;Name=LDO49_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18365;old_locus_tag=BCEP4_2420004 NZ_CAJZAV010000160.1 Protein Homology CDS 1610 1855 . + 0 ID=cds-WP_021164227.1;Parent=gene-LDO49_RS18365;Dbxref=GenBank:WP_021164227.1;Name=WP_021164227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545545.1;locus_tag=LDO49_RS18365;product=hypothetical protein;protein_id=WP_021164227.1;transl_table=11 NZ_CAJZAV010000160.1 RefSeq gene 1874 3124 . - . ID=gene-LDO49_RS18370;Name=LDO49_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18370;old_locus_tag=BCEP4_2420005 NZ_CAJZAV010000160.1 Protein Homology CDS 1874 3124 . - 0 ID=cds-WP_224052156.1;Parent=gene-LDO49_RS18370;Dbxref=GenBank:WP_224052156.1;Name=WP_224052156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398950.1;locus_tag=LDO49_RS18370;product=phosphatidylserine decarboxylase family protein;protein_id=WP_224052156.1;transl_table=11 NZ_CAJZAV010000160.1 RefSeq gene 3236 3520 . + . ID=gene-LDO49_RS18375;Name=LDO49_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18375 NZ_CAJZAV010000160.1 Protein Homology CDS 3236 3520 . + 0 ID=cds-WP_059485892.1;Parent=gene-LDO49_RS18375;Dbxref=GenBank:WP_059485892.1;Name=WP_059485892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372648.1;locus_tag=LDO49_RS18375;product=hypothetical protein;protein_id=WP_059485892.1;transl_table=11 NZ_CAJZAV010000160.1 RefSeq pseudogene 3629 4400 . - . ID=gene-LDO49_RS18380;Name=LDO49_RS18380;end_range=4400,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS18380;old_locus_tag=BCEP4_2420006;partial=true;pseudo=true NZ_CAJZAV010000160.1 Protein Homology CDS 3629 4400 . - 1 ID=cds-LDO49_RS18380;Parent=gene-LDO49_RS18380;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=4400,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545542.1;locus_tag=LDO49_RS18380;partial=true;product=malto-oligosyltrehalose synthase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000161.1 1 1734 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000161.1 RefSeq region 1 1734 . + . ID=NZ_CAJZAV010000161.1:1..1734;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_243 NZ_CAJZAV010000161.1 RefSeq gene 1 207 . - . ID=gene-LDO49_RS18385;Name=LDO49_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18385;partial=true;start_range=.,1 NZ_CAJZAV010000161.1 Protein Homology CDS 1 207 . - 0 ID=cds-WP_224052158.1;Parent=gene-LDO49_RS18385;Dbxref=GenBank:WP_224052158.1;Name=WP_224052158.1;Ontology_term=GO:0009236,GO:0016994;gbkey=CDS;go_function=precorrin-6A reductase activity|0016994||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400061.1;locus_tag=LDO49_RS18385;partial=true;product=precorrin-6A/cobalt-precorrin-6A reductase;protein_id=WP_224052158.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000161.1 RefSeq gene 204 1292 . - . ID=gene-LDO49_RS18390;Name=LDO49_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18390;old_locus_tag=BCEP4_2430002 NZ_CAJZAV010000161.1 Protein Homology CDS 204 1292 . - 0 ID=cds-WP_060069950.1;Parent=gene-LDO49_RS18390;Dbxref=GenBank:WP_060069950.1;Name=WP_060069950.1;Ontology_term=GO:0009236,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496429.1;locus_tag=LDO49_RS18390;product=cobalt-precorrin-5B (C(1))-methyltransferase;protein_id=WP_060069950.1;transl_table=11 NZ_CAJZAV010000161.1 RefSeq pseudogene 1364 1734 . - . ID=gene-LDO49_RS37405;Name=LDO49_RS37405;end_range=1734,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37405;old_locus_tag=BCEP4_2430003;partial=true;pseudo=true;start_range=.,1364 NZ_CAJZAV010000161.1 Protein Homology CDS 1364 1734 . - 1 ID=cds-LDO49_RS37405;Parent=gene-LDO49_RS37405;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1734,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363888.1;locus_tag=LDO49_RS37405;partial=true;product=bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase;pseudo=true;start_range=.,1364;transl_table=11 ##sequence-region NZ_CAJZAV010000162.1 1 831 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000162.1 RefSeq region 1 831 . + . ID=NZ_CAJZAV010000162.1:1..831;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_244 NZ_CAJZAV010000162.1 RefSeq pseudogene 20 289 . + . ID=gene-LDO49_RS18400;Name=LDO49_RS18400;end_range=289,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS18400;partial=true;pseudo=true NZ_CAJZAV010000162.1 Protein Homology CDS 20 289 . + 0 ID=cds-LDO49_RS18400;Parent=gene-LDO49_RS18400;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=289,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336742.1;locus_tag=LDO49_RS18400;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAV010000162.1 RefSeq pseudogene 303 831 . - . ID=gene-LDO49_RS18405;Name=LDO49_RS18405;end_range=831,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS18405;old_locus_tag=BCEP4_2440001;partial=true;pseudo=true NZ_CAJZAV010000162.1 Protein Homology CDS 303 831 . - 1 ID=cds-LDO49_RS18405;Parent=gene-LDO49_RS18405;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=831,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355163.1;locus_tag=LDO49_RS18405;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000163.1 1 1065 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000163.1 RefSeq region 1 1065 . + . ID=NZ_CAJZAV010000163.1:1..1065;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_245 NZ_CAJZAV010000163.1 RefSeq gene 1 585 . + . ID=gene-LDO49_RS18410;Name=LDO49_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18410;old_locus_tag=BCEP4_2450001;partial=true;start_range=.,1 NZ_CAJZAV010000163.1 GeneMarkS-2+ CDS 1 585 . + 0 ID=cds-WP_224052159.1;Parent=gene-LDO49_RS18410;Dbxref=GenBank:WP_224052159.1;Name=WP_224052159.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS18410;partial=true;product=hypothetical protein;protein_id=WP_224052159.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000163.1 RefSeq pseudogene 663 1065 . + . ID=gene-LDO49_RS18415;Name=LDO49_RS18415;end_range=1065,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS18415;partial=true;pseudo=true NZ_CAJZAV010000163.1 Protein Homology CDS 663 1065 . + 0 ID=cds-LDO49_RS18415;Parent=gene-LDO49_RS18415;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1065,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355163.1;locus_tag=LDO49_RS18415;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000164.1 1 11479 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000164.1 RefSeq region 1 11479 . + . ID=NZ_CAJZAV010000164.1:1..11479;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_246 NZ_CAJZAV010000164.1 RefSeq pseudogene 108 226 . - . ID=gene-LDO49_RS38180;Name=LDO49_RS38180;end_range=226,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38180;old_locus_tag=BCEP4_2460001;partial=true;pseudo=true NZ_CAJZAV010000164.1 Protein Homology CDS 108 226 . - 2 ID=cds-LDO49_RS38180;Parent=gene-LDO49_RS38180;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=226,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896425.1;locus_tag=LDO49_RS38180;partial=true;product=endonuclease III;pseudo=true;transl_table=11 NZ_CAJZAV010000164.1 RefSeq gene 237 732 . - . ID=gene-LDO49_RS18420;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=LDO49_RS18420;partial=true;start_range=.,237 NZ_CAJZAV010000164.1 Protein Homology CDS 237 732 . - 0 ID=cds-WP_443797977.1;Parent=gene-LDO49_RS18420;Dbxref=GenBank:WP_443797977.1;Name=WP_443797977.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013338622.1;locus_tag=LDO49_RS18420;partial=true;product=endonuclease III;protein_id=WP_443797977.1;start_range=.,237;transl_table=11 NZ_CAJZAV010000164.1 RefSeq gene 729 1721 . - . ID=gene-LDO49_RS18425;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=LDO49_RS18425;old_locus_tag=BCEP4_2460003 NZ_CAJZAV010000164.1 Protein Homology CDS 729 1721 . - 0 ID=cds-WP_060072145.1;Parent=gene-LDO49_RS18425;Dbxref=GenBank:WP_060072145.1;Name=WP_060072145.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212964.1;locus_tag=LDO49_RS18425;product=electron transport complex subunit RsxB;protein_id=WP_060072145.1;transl_table=11 NZ_CAJZAV010000164.1 RefSeq gene 1878 2510 . + . ID=gene-LDO49_RS18430;Name=LDO49_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18430;old_locus_tag=BCEP4_2460004 NZ_CAJZAV010000164.1 Protein Homology CDS 1878 2510 . + 0 ID=cds-WP_059590646.1;Parent=gene-LDO49_RS18430;Dbxref=GenBank:WP_059590646.1;Name=WP_059590646.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185974.1;locus_tag=LDO49_RS18430;product=TetR family transcriptional regulator;protein_id=WP_059590646.1;transl_table=11 NZ_CAJZAV010000164.1 RefSeq gene 2602 4080 . - . ID=gene-LDO49_RS18435;Name=LDO49_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18435;old_locus_tag=BCEP4_2460005 NZ_CAJZAV010000164.1 Protein Homology CDS 2602 4080 . - 0 ID=cds-WP_021161257.1;Parent=gene-LDO49_RS18435;Dbxref=GenBank:WP_021161257.1;Name=WP_021161257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545868.1;locus_tag=LDO49_RS18435;product=polyhydroxyalkanoate depolymerase;protein_id=WP_021161257.1;transl_table=11 NZ_CAJZAV010000164.1 RefSeq gene 4292 6121 . - . ID=gene-LDO49_RS18440;Name=LDO49_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18440;old_locus_tag=BCEP4_2460006 NZ_CAJZAV010000164.1 Protein Homology CDS 4292 6121 . - 0 ID=cds-WP_048026570.1;Parent=gene-LDO49_RS18440;Dbxref=GenBank:WP_048026570.1;Name=WP_048026570.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331492.1;locus_tag=LDO49_RS18440;product=glycoside hydrolase family 15 protein;protein_id=WP_048026570.1;transl_table=11 NZ_CAJZAV010000164.1 RefSeq gene 6288 7532 . + . ID=gene-LDO49_RS18445;Name=LDO49_RS18445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18445;old_locus_tag=BCEP4_2460007 NZ_CAJZAV010000164.1 Protein Homology CDS 6288 7532 . + 0 ID=cds-WP_104768670.1;Parent=gene-LDO49_RS18445;Dbxref=GenBank:WP_104768670.1;Name=WP_104768670.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352784.1;locus_tag=LDO49_RS18445;product=lactonase family protein;protein_id=WP_104768670.1;transl_table=11 NZ_CAJZAV010000164.1 RefSeq gene 7630 11479 . - . ID=gene-LDO49_RS18450;Name=LDO49_RS18450;end_range=11479,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18450;old_locus_tag=BCEP4_2460009;partial=true NZ_CAJZAV010000164.1 Protein Homology CDS 7630 11479 . - 1 ID=cds-WP_290369864.1;Parent=gene-LDO49_RS18450;Dbxref=GenBank:WP_290369864.1;Name=WP_290369864.1;end_range=11479,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412708.1;locus_tag=LDO49_RS18450;partial=true;product=DNA translocase FtsK;protein_id=WP_290369864.1;transl_table=11 ##sequence-region NZ_CAJZAV010000165.1 1 5611 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000165.1 RefSeq region 1 5611 . + . ID=NZ_CAJZAV010000165.1:1..5611;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_247 NZ_CAJZAV010000165.1 RefSeq pseudogene 57 1994 . - . ID=gene-LDO49_RS18460;Name=LDO49_RS18460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS18460;old_locus_tag=BCEP4_2470001;partial=true;pseudo=true;start_range=.,57 NZ_CAJZAV010000165.1 Protein Homology CDS 57 1994 . - 0 ID=cds-LDO49_RS18460;Parent=gene-LDO49_RS18460;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497849.1;locus_tag=LDO49_RS18460;partial=true;product=FUSC family protein;pseudo=true;start_range=.,57;transl_table=11 NZ_CAJZAV010000165.1 RefSeq gene 1991 2470 . - . ID=gene-LDO49_RS18465;Name=LDO49_RS18465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18465;old_locus_tag=BCEP4_2470002 NZ_CAJZAV010000165.1 Protein Homology CDS 1991 2470 . - 0 ID=cds-WP_048028119.1;Parent=gene-LDO49_RS18465;Dbxref=GenBank:WP_048028119.1;Name=WP_048028119.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481010.1;locus_tag=LDO49_RS18465;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_048028119.1;transl_table=11 NZ_CAJZAV010000165.1 RefSeq gene 2802 3662 . + . ID=gene-LDO49_RS18470;Name=LDO49_RS18470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18470;old_locus_tag=BCEP4_2470005 NZ_CAJZAV010000165.1 Protein Homology CDS 2802 3662 . + 0 ID=cds-WP_059487864.1;Parent=gene-LDO49_RS18470;Dbxref=GenBank:WP_059487864.1;Name=WP_059487864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350406.1;locus_tag=LDO49_RS18470;product=FAS1-like dehydratase domain-containing protein;protein_id=WP_059487864.1;transl_table=11 NZ_CAJZAV010000165.1 RefSeq gene 3876 4163 . + . ID=gene-LDO49_RS18475;Name=LDO49_RS18475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18475;old_locus_tag=BCEP4_2470007 NZ_CAJZAV010000165.1 Protein Homology CDS 3876 4163 . + 0 ID=cds-WP_021160733.1;Parent=gene-LDO49_RS18475;Dbxref=GenBank:WP_021160733.1;Name=WP_021160733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007590239.1;locus_tag=LDO49_RS18475;product=DUF1330 domain-containing protein;protein_id=WP_021160733.1;transl_table=11 NZ_CAJZAV010000165.1 RefSeq gene 4222 4692 . + . ID=gene-LDO49_RS18480;Name=LDO49_RS18480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18480;old_locus_tag=BCEP4_2470008 NZ_CAJZAV010000165.1 GeneMarkS-2+ CDS 4222 4692 . + 0 ID=cds-WP_124475932.1;Parent=gene-LDO49_RS18480;Dbxref=GenBank:WP_124475932.1;Name=WP_124475932.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS18480;product=hypothetical protein;protein_id=WP_124475932.1;transl_table=11 NZ_CAJZAV010000165.1 RefSeq gene 4726 5611 . - . ID=gene-LDO49_RS18485;Name=dhaL;end_range=5611,.;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=LDO49_RS18485;old_locus_tag=BCEP4_2470009;partial=true NZ_CAJZAV010000165.1 Protein Homology CDS 4726 5611 . - 1 ID=cds-WP_224052162.1;Parent=gene-LDO49_RS18485;Dbxref=GenBank:WP_224052162.1;Name=WP_224052162.1;Ontology_term=GO:0006071,GO:0047324;end_range=5611,.;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554346.1;locus_tag=LDO49_RS18485;partial=true;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_224052162.1;transl_table=11 ##sequence-region NZ_CAJZAV010000166.1 1 7772 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000166.1 RefSeq region 1 7772 . + . ID=NZ_CAJZAV010000166.1:1..7772;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_248 NZ_CAJZAV010000166.1 RefSeq gene 1 292 . - . ID=gene-LDO49_RS18490;Name=LDO49_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18490;partial=true;start_range=.,1 NZ_CAJZAV010000166.1 Protein Homology CDS 1 292 . - 0 ID=cds-WP_290369865.1;Parent=gene-LDO49_RS18490;Dbxref=GenBank:WP_290369865.1;Name=WP_290369865.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350368.1;locus_tag=LDO49_RS18490;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_290369865.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000166.1 RefSeq gene 304 1425 . - . ID=gene-LDO49_RS18495;Name=LDO49_RS18495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18495;old_locus_tag=BCEP4_2480002 NZ_CAJZAV010000166.1 Protein Homology CDS 304 1425 . - 0 ID=cds-WP_059551800.1;Parent=gene-LDO49_RS18495;Dbxref=GenBank:WP_059551800.1;Name=WP_059551800.1;Ontology_term=GO:0015846,GO:0019808,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350369.1;locus_tag=LDO49_RS18495;product=polyamine ABC transporter substrate-binding protein;protein_id=WP_059551800.1;transl_table=11 NZ_CAJZAV010000166.1 RefSeq gene 1668 2501 . + . ID=gene-LDO49_RS18500;Name=LDO49_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18500;old_locus_tag=BCEP4_2480003 NZ_CAJZAV010000166.1 Protein Homology CDS 1668 2501 . + 0 ID=cds-WP_059487810.1;Parent=gene-LDO49_RS18500;Dbxref=GenBank:WP_059487810.1;Name=WP_059487810.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660942.1;locus_tag=LDO49_RS18500;product=helix-turn-helix transcriptional regulator;protein_id=WP_059487810.1;transl_table=11 NZ_CAJZAV010000166.1 RefSeq gene 2654 3826 . + . ID=gene-LDO49_RS18505;Name=LDO49_RS18505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18505;old_locus_tag=BCEP4_2480004 NZ_CAJZAV010000166.1 Protein Homology CDS 2654 3826 . + 0 ID=cds-WP_224052164.1;Parent=gene-LDO49_RS18505;Dbxref=GenBank:WP_224052164.1;Name=WP_224052164.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756579.1;locus_tag=LDO49_RS18505;product=porin;protein_id=WP_224052164.1;transl_table=11 NZ_CAJZAV010000166.1 RefSeq gene 3946 4590 . + . ID=gene-LDO49_RS18510;Name=LDO49_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18510;old_locus_tag=BCEP4_2480005 NZ_CAJZAV010000166.1 Protein Homology CDS 3946 4590 . + 0 ID=cds-WP_059491831.1;Parent=gene-LDO49_RS18510;Dbxref=GenBank:WP_059491831.1;Name=WP_059491831.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497886.1;locus_tag=LDO49_RS18510;product=glutathione S-transferase family protein;protein_id=WP_059491831.1;transl_table=11 NZ_CAJZAV010000166.1 RefSeq gene 4745 5908 . + . ID=gene-LDO49_RS18515;Name=LDO49_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18515;old_locus_tag=BCEP4_2480006 NZ_CAJZAV010000166.1 Protein Homology CDS 4745 5908 . + 0 ID=cds-WP_063812018.1;Parent=gene-LDO49_RS18515;Dbxref=GenBank:WP_063812018.1;Name=WP_063812018.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337115.1;locus_tag=LDO49_RS18515;product=acyltransferase family protein;protein_id=WP_063812018.1;transl_table=11 NZ_CAJZAV010000166.1 RefSeq gene 5967 6476 . - . ID=gene-LDO49_RS18520;Name=LDO49_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18520;old_locus_tag=BCEP4_2480007 NZ_CAJZAV010000166.1 Protein Homology CDS 5967 6476 . - 0 ID=cds-WP_060147661.1;Parent=gene-LDO49_RS18520;Dbxref=GenBank:WP_060147661.1;Name=WP_060147661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350373.1;locus_tag=LDO49_RS18520;product=hypothetical protein;protein_id=WP_060147661.1;transl_table=11 NZ_CAJZAV010000166.1 RefSeq gene 6720 7175 . - . ID=gene-LDO49_RS18525;Name=LDO49_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18525;old_locus_tag=BCEP4_2480009 NZ_CAJZAV010000166.1 Protein Homology CDS 6720 7175 . - 0 ID=cds-WP_060147660.1;Parent=gene-LDO49_RS18525;Dbxref=GenBank:WP_060147660.1;Name=WP_060147660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350374.1;locus_tag=LDO49_RS18525;product=hypothetical protein;protein_id=WP_060147660.1;transl_table=11 NZ_CAJZAV010000166.1 RefSeq gene 7288 7772 . - . ID=gene-LDO49_RS18530;Name=LDO49_RS18530;end_range=7772,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18530;old_locus_tag=BCEP4_2480010;partial=true NZ_CAJZAV010000166.1 Protein Homology CDS 7288 7772 . - 2 ID=cds-WP_224052165.1;Parent=gene-LDO49_RS18530;Dbxref=GenBank:WP_224052165.1;Name=WP_224052165.1;end_range=7772,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497884.1;locus_tag=LDO49_RS18530;partial=true;product=nitroreductase;protein_id=WP_224052165.1;transl_table=11 ##sequence-region NZ_CAJZAV010000167.1 1 1449 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000167.1 RefSeq region 1 1449 . + . ID=NZ_CAJZAV010000167.1:1..1449;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_249 NZ_CAJZAV010000167.1 RefSeq gene 134 1369 . + . ID=gene-LDO49_RS18535;Name=LDO49_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18535;old_locus_tag=BCEP4_2490001 NZ_CAJZAV010000167.1 Protein Homology CDS 134 1369 . + 0 ID=cds-WP_224052169.1;Parent=gene-LDO49_RS18535;Dbxref=GenBank:WP_224052169.1;Name=WP_224052169.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882724.1;locus_tag=LDO49_RS18535;product=IS110 family transposase;protein_id=WP_224052169.1;transl_table=11 ##sequence-region NZ_CAJZAV010000168.1 1 59305 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000168.1 RefSeq region 1 59305 . + . ID=NZ_CAJZAV010000168.1:1..59305;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_25 NZ_CAJZAV010000168.1 RefSeq gene 110 598 . - . ID=gene-LDO49_RS18540;Name=LDO49_RS18540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18540;old_locus_tag=BCEP4_250002 NZ_CAJZAV010000168.1 Protein Homology CDS 110 598 . - 0 ID=cds-WP_021161452.1;Parent=gene-LDO49_RS18540;Dbxref=GenBank:WP_021161452.1;Name=WP_021161452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898568.1;locus_tag=LDO49_RS18540;product=thioesterase family protein;protein_id=WP_021161452.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 628 1593 . - . ID=gene-LDO49_RS18545;Name=LDO49_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18545;old_locus_tag=BCEP4_250003 NZ_CAJZAV010000168.1 Protein Homology CDS 628 1593 . - 0 ID=cds-WP_021161453.1;Parent=gene-LDO49_RS18545;Dbxref=GenBank:WP_021161453.1;Name=WP_021161453.1;Ontology_term=GO:0006631,GO:0016616,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484739.1;locus_tag=LDO49_RS18545;product=L-carnitine dehydrogenase;protein_id=WP_021161453.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 1684 2613 . - . ID=gene-LDO49_RS18550;Name=LDO49_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18550;old_locus_tag=BCEP4_250004 NZ_CAJZAV010000168.1 Protein Homology CDS 1684 2613 . - 0 ID=cds-WP_060072027.1;Parent=gene-LDO49_RS18550;Dbxref=GenBank:WP_060072027.1;Name=WP_060072027.1;Ontology_term=GO:0019475,GO:0043720,GO:0046872;gbkey=CDS;go_function=3-keto-5-aminohexanoate cleavage activity|0043720||IEA,metal ion binding|0046872||IEA;go_process=L-lysine fermentation|0019475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396403.1;locus_tag=LDO49_RS18550;product=3-keto-5-aminohexanoate cleavage protein;protein_id=WP_060072027.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 2693 3646 . - . ID=gene-LDO49_RS18555;Name=LDO49_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18555;old_locus_tag=BCEP4_250006 NZ_CAJZAV010000168.1 Protein Homology CDS 2693 3646 . - 0 ID=cds-WP_224052170.1;Parent=gene-LDO49_RS18555;Dbxref=GenBank:WP_224052170.1;Name=WP_224052170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017328652.1;locus_tag=LDO49_RS18555;product=choline ABC transporter substrate-binding protein;protein_id=WP_224052170.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 4258 5841 . + . ID=gene-LDO49_RS18560;Name=LDO49_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18560;old_locus_tag=BCEP4_250007 NZ_CAJZAV010000168.1 Protein Homology CDS 4258 5841 . + 0 ID=cds-WP_021161457.1;Parent=gene-LDO49_RS18560;Dbxref=GenBank:WP_021161457.1;Name=WP_021161457.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018006619.1;locus_tag=LDO49_RS18560;product=isocitrate lyase;protein_id=WP_021161457.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 5928 6827 . - . ID=gene-LDO49_RS18565;Name=LDO49_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18565;old_locus_tag=BCEP4_250008 NZ_CAJZAV010000168.1 Protein Homology CDS 5928 6827 . - 0 ID=cds-WP_060072031.1;Parent=gene-LDO49_RS18565;Dbxref=GenBank:WP_060072031.1;Name=WP_060072031.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480684.1;locus_tag=LDO49_RS18565;product=LysR family transcriptional regulator;protein_id=WP_060072031.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 6948 7391 . + . ID=gene-LDO49_RS18570;Name=LDO49_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18570;old_locus_tag=BCEP4_250009 NZ_CAJZAV010000168.1 Protein Homology CDS 6948 7391 . + 0 ID=cds-WP_060072034.1;Parent=gene-LDO49_RS18570;Dbxref=GenBank:WP_060072034.1;Name=WP_060072034.1;Ontology_term=GO:0055085,GO:0005215,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480683.1;locus_tag=LDO49_RS18570;product=DMT family transporter;protein_id=WP_060072034.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 7674 9179 . - . ID=gene-LDO49_RS18575;Name=LDO49_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18575;old_locus_tag=BCEP4_250011 NZ_CAJZAV010000168.1 Protein Homology CDS 7674 9179 . - 0 ID=cds-WP_059489578.1;Parent=gene-LDO49_RS18575;Dbxref=GenBank:WP_059489578.1;Name=WP_059489578.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484740.1;locus_tag=LDO49_RS18575;product=aldehyde dehydrogenase family protein;protein_id=WP_059489578.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 9213 9653 . - . ID=gene-LDO49_RS18580;Name=LDO49_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18580;old_locus_tag=BCEP4_250012 NZ_CAJZAV010000168.1 Protein Homology CDS 9213 9653 . - 0 ID=cds-WP_205713655.1;Parent=gene-LDO49_RS18580;Dbxref=GenBank:WP_205713655.1;Name=WP_205713655.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366711.1;locus_tag=LDO49_RS18580;product=c-type cytochrome;protein_id=WP_205713655.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 9755 10255 . - . ID=gene-LDO49_RS18585;Name=LDO49_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18585;old_locus_tag=BCEP4_250013 NZ_CAJZAV010000168.1 Protein Homology CDS 9755 10255 . - 0 ID=cds-WP_059494882.1;Parent=gene-LDO49_RS18585;Dbxref=GenBank:WP_059494882.1;Name=WP_059494882.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339554.1;locus_tag=LDO49_RS18585;product=c-type cytochrome;protein_id=WP_059494882.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 10252 10788 . - . ID=gene-LDO49_RS18590;Name=LDO49_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18590;old_locus_tag=BCEP4_250014 NZ_CAJZAV010000168.1 Protein Homology CDS 10252 10788 . - 0 ID=cds-WP_060072038.1;Parent=gene-LDO49_RS18590;Dbxref=GenBank:WP_060072038.1;Name=WP_060072038.1;Ontology_term=GO:0009308,GO:0016638,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=amine metabolic process|0009308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409135.1;locus_tag=LDO49_RS18590;product=methylamine dehydrogenase light chain;protein_id=WP_060072038.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 10828 11454 . - . ID=gene-LDO49_RS18595;Name=mauD;gbkey=Gene;gene=mauD;gene_biotype=protein_coding;locus_tag=LDO49_RS18595;old_locus_tag=BCEP4_250015 NZ_CAJZAV010000168.1 Protein Homology CDS 10828 11454 . - 0 ID=cds-WP_021161465.1;Parent=gene-LDO49_RS18595;Dbxref=GenBank:WP_021161465.1;Name=WP_021161465.1;Ontology_term=GO:0030416;gbkey=CDS;gene=mauD;go_process=methylamine metabolic process|0030416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354211.1;locus_tag=LDO49_RS18595;product=methylamine dehydrogenase accessory protein MauD;protein_id=WP_021161465.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 11451 12005 . - . ID=gene-LDO49_RS18600;Name=LDO49_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18600;old_locus_tag=BCEP4_250016 NZ_CAJZAV010000168.1 Protein Homology CDS 11451 12005 . - 0 ID=cds-WP_048024826.1;Parent=gene-LDO49_RS18600;Dbxref=GenBank:WP_048024826.1;Name=WP_048024826.1;Ontology_term=GO:0030416,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=methylamine metabolic process|0030416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898551.1;locus_tag=LDO49_RS18600;product=MauE/DoxX family redox-associated membrane protein;protein_id=WP_048024826.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 12013 13170 . - . ID=gene-LDO49_RS18605;Name=LDO49_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18605;old_locus_tag=BCEP4_250017 NZ_CAJZAV010000168.1 Protein Homology CDS 12013 13170 . - 0 ID=cds-WP_224052171.1;Parent=gene-LDO49_RS18605;Dbxref=GenBank:WP_224052171.1;Name=WP_224052171.1;Ontology_term=GO:0030058,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_function=aliphatic amine dehydrogenase activity|0030058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354209.1;locus_tag=LDO49_RS18605;product=amine dehydrogenase large subunit;protein_id=WP_224052171.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 13415 14377 . + . ID=gene-LDO49_RS18610;Name=LDO49_RS18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18610;old_locus_tag=BCEP4_250018 NZ_CAJZAV010000168.1 Protein Homology CDS 13415 14377 . + 0 ID=cds-WP_048024823.1;Parent=gene-LDO49_RS18610;Dbxref=GenBank:WP_048024823.1;Name=WP_048024823.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480676.1;locus_tag=LDO49_RS18610;product=helix-turn-helix domain-containing protein;protein_id=WP_048024823.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 14466 15410 . + . ID=gene-LDO49_RS18615;Name=LDO49_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18615;old_locus_tag=BCEP4_250019 NZ_CAJZAV010000168.1 Protein Homology CDS 14466 15410 . + 0 ID=cds-WP_021161470.1;Parent=gene-LDO49_RS18615;Dbxref=GenBank:WP_021161470.1;Name=WP_021161470.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898548.1;locus_tag=LDO49_RS18615;product=GlxA family transcriptional regulator;protein_id=WP_021161470.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 15908 17620 . + . ID=gene-LDO49_RS18620;Name=LDO49_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18620;old_locus_tag=BCEP4_250022 NZ_CAJZAV010000168.1 Protein Homology CDS 15908 17620 . + 0 ID=cds-WP_224052172.1;Parent=gene-LDO49_RS18620;Dbxref=GenBank:WP_224052172.1;Name=WP_224052172.1;Ontology_term=GO:0004222,GO:0008270,GO:0005615;gbkey=CDS;go_component=extracellular space|0005615||IEA;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547114.1;locus_tag=LDO49_RS18620;product=M36 family metallopeptidase;protein_id=WP_224052172.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 17700 18953 . + . ID=gene-LDO49_RS18625;Name=LDO49_RS18625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18625;old_locus_tag=BCEP4_250023 NZ_CAJZAV010000168.1 Protein Homology CDS 17700 18953 . + 0 ID=cds-WP_224052173.1;Parent=gene-LDO49_RS18625;Dbxref=GenBank:WP_224052173.1;Name=WP_224052173.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498753.1;locus_tag=LDO49_RS18625;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_224052173.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 19129 19491 . + . ID=gene-LDO49_RS18630;Name=LDO49_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18630;old_locus_tag=BCEP4_250024 NZ_CAJZAV010000168.1 Protein Homology CDS 19129 19491 . + 0 ID=cds-WP_059489505.1;Parent=gene-LDO49_RS18630;Dbxref=GenBank:WP_059489505.1;Name=WP_059489505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880759.1;locus_tag=LDO49_RS18630;product=YbjQ family protein;protein_id=WP_059489505.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 19498 20748 . - . ID=gene-LDO49_RS18635;Name=LDO49_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18635;old_locus_tag=BCEP4_250025 NZ_CAJZAV010000168.1 Protein Homology CDS 19498 20748 . - 0 ID=cds-WP_224052174.1;Parent=gene-LDO49_RS18635;Dbxref=GenBank:WP_224052174.1;Name=WP_224052174.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547111.1;locus_tag=LDO49_RS18635;product=MFS transporter;protein_id=WP_224052174.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 20999 22411 . - . ID=gene-LDO49_RS18640;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=LDO49_RS18640;old_locus_tag=BCEP4_250026 NZ_CAJZAV010000168.1 Protein Homology CDS 20999 22411 . - 0 ID=cds-WP_224052181.1;Parent=gene-LDO49_RS18640;Dbxref=GenBank:WP_224052181.1;Name=WP_224052181.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354198.1;locus_tag=LDO49_RS18640;product=cysteine--tRNA ligase;protein_id=WP_224052181.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 22797 23936 . - . ID=gene-LDO49_RS18645;Name=LDO49_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18645;old_locus_tag=BCEP4_250028 NZ_CAJZAV010000168.1 Protein Homology CDS 22797 23936 . - 0 ID=cds-WP_021161478.1;Parent=gene-LDO49_RS18645;Dbxref=GenBank:WP_021161478.1;Name=WP_021161478.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898544.1;locus_tag=LDO49_RS18645;product=porin;protein_id=WP_021161478.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 24197 25165 . - . ID=gene-LDO49_RS18650;Name=choX;gbkey=Gene;gene=choX;gene_biotype=protein_coding;locus_tag=LDO49_RS18650;old_locus_tag=BCEP4_250030 NZ_CAJZAV010000168.1 Protein Homology CDS 24197 25165 . - 0 ID=cds-WP_059489509.1;Parent=gene-LDO49_RS18650;Dbxref=GenBank:WP_059489509.1;Name=WP_059489509.1;Ontology_term=GO:0015871,GO:0033265,GO:0042597;gbkey=CDS;gene=choX;go_component=periplasmic space|0042597||IEA;go_function=choline binding|0033265||IEA;go_process=choline transport|0015871||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756091.1;locus_tag=LDO49_RS18650;product=choline ABC transporter substrate-binding protein;protein_id=WP_059489509.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 25211 26746 . - . ID=gene-LDO49_RS18655;Name=betC;gbkey=Gene;gene=betC;gene_biotype=protein_coding;locus_tag=LDO49_RS18655;old_locus_tag=BCEP4_250031 NZ_CAJZAV010000168.1 Protein Homology CDS 25211 26746 . - 0 ID=cds-WP_224052175.1;Parent=gene-LDO49_RS18655;Dbxref=GenBank:WP_224052175.1;Name=WP_224052175.1;Ontology_term=GO:0008484;gbkey=CDS;gene=betC;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756090.1;locus_tag=LDO49_RS18655;product=choline-sulfatase;protein_id=WP_224052175.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 27046 27951 . + . ID=gene-LDO49_RS18660;Name=LDO49_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18660;old_locus_tag=BCEP4_250032 NZ_CAJZAV010000168.1 Protein Homology CDS 27046 27951 . + 0 ID=cds-WP_042976344.1;Parent=gene-LDO49_RS18660;Dbxref=GenBank:WP_042976344.1;Name=WP_042976344.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480666.1;locus_tag=LDO49_RS18660;product=choline sulfate utilization transcriptional regulator;protein_id=WP_042976344.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 28225 29112 . + . ID=gene-LDO49_RS18665;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=LDO49_RS18665;old_locus_tag=BCEP4_250033 NZ_CAJZAV010000168.1 Protein Homology CDS 28225 29112 . + 0 ID=cds-WP_059489511.1;Parent=gene-LDO49_RS18665;Dbxref=GenBank:WP_059489511.1;Name=WP_059489511.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898540.1;locus_tag=LDO49_RS18665;product=formyltetrahydrofolate deformylase;protein_id=WP_059489511.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 29134 30126 . - . ID=gene-LDO49_RS18670;Name=LDO49_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18670;old_locus_tag=BCEP4_250034 NZ_CAJZAV010000168.1 Protein Homology CDS 29134 30126 . - 0 ID=cds-WP_224052176.1;Parent=gene-LDO49_RS18670;Dbxref=GenBank:WP_224052176.1;Name=WP_224052176.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354192.1;locus_tag=LDO49_RS18670;product=DMT family transporter;protein_id=WP_224052176.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 30293 30904 . - . ID=gene-LDO49_RS18675;Name=LDO49_RS18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18675;old_locus_tag=BCEP4_250035 NZ_CAJZAV010000168.1 Protein Homology CDS 30293 30904 . - 0 ID=cds-WP_048026439.1;Parent=gene-LDO49_RS18675;Dbxref=GenBank:WP_048026439.1;Name=WP_048026439.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354191.1;locus_tag=LDO49_RS18675;product=TetR/AcrR family transcriptional regulator;protein_id=WP_048026439.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 30903 31412 . + . ID=gene-LDO49_RS18680;Name=LDO49_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18680;old_locus_tag=BCEP4_250036 NZ_CAJZAV010000168.1 Protein Homology CDS 30903 31412 . + 0 ID=cds-WP_081058076.1;Parent=gene-LDO49_RS18680;Dbxref=GenBank:WP_081058076.1;Name=WP_081058076.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024491.6;locus_tag=LDO49_RS18680;product=phospholipase D-like domain-containing protein;protein_id=WP_081058076.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 31416 32732 . + . ID=gene-LDO49_RS18685;Name=LDO49_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18685;old_locus_tag=BCEP4_250037 NZ_CAJZAV010000168.1 Protein Homology CDS 31416 32732 . + 0 ID=cds-WP_224052177.1;Parent=gene-LDO49_RS18685;Dbxref=GenBank:WP_224052177.1;Name=WP_224052177.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493018.1;locus_tag=LDO49_RS18685;product=SEL1-like repeat protein;protein_id=WP_224052177.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 32963 34279 . + . ID=gene-LDO49_RS18690;Name=LDO49_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18690;old_locus_tag=BCEP4_250038 NZ_CAJZAV010000168.1 Protein Homology CDS 32963 34279 . + 0 ID=cds-WP_224052178.1;Parent=gene-LDO49_RS18690;Dbxref=GenBank:WP_224052178.1;Name=WP_224052178.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493017.1;locus_tag=LDO49_RS18690;product=SEL1-like repeat protein;protein_id=WP_224052178.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 34391 36046 . - . ID=gene-LDO49_RS18695;Name=LDO49_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18695;old_locus_tag=BCEP4_250040 NZ_CAJZAV010000168.1 Protein Homology CDS 34391 36046 . - 0 ID=cds-WP_021160640.1;Parent=gene-LDO49_RS18695;Dbxref=GenBank:WP_021160640.1;Name=WP_021160640.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396370.1;locus_tag=LDO49_RS18695;product=APC family permease;protein_id=WP_021160640.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 36225 37088 . - . ID=gene-LDO49_RS18700;Name=LDO49_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18700;old_locus_tag=BCEP4_250041 NZ_CAJZAV010000168.1 Protein Homology CDS 36225 37088 . - 0 ID=cds-WP_021160639.1;Parent=gene-LDO49_RS18700;Dbxref=GenBank:WP_021160639.1;Name=WP_021160639.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523141.1;locus_tag=LDO49_RS18700;product=glycine betaine ABC transporter substrate-binding protein;protein_id=WP_021160639.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 37223 38371 . - . ID=gene-LDO49_RS18705;Name=LDO49_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18705;old_locus_tag=BCEP4_250042 NZ_CAJZAV010000168.1 Protein Homology CDS 37223 38371 . - 0 ID=cds-WP_224052179.1;Parent=gene-LDO49_RS18705;Dbxref=GenBank:WP_224052179.1;Name=WP_224052179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749542.1;locus_tag=LDO49_RS18705;product=hybrid-cluster NAD(P)-dependent oxidoreductase;protein_id=WP_224052179.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 38398 39639 . - . ID=gene-LDO49_RS18710;Name=LDO49_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18710;old_locus_tag=BCEP4_250043 NZ_CAJZAV010000168.1 Protein Homology CDS 38398 39639 . - 0 ID=cds-WP_021160637.1;Parent=gene-LDO49_RS18710;Dbxref=GenBank:WP_021160637.1;Name=WP_021160637.1;Ontology_term=GO:0005506,GO:0016705,GO:0051537;gbkey=CDS;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089906.1;locus_tag=LDO49_RS18710;product=aromatic ring-hydroxylating oxygenase subunit alpha;protein_id=WP_021160637.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 39692 40477 . - . ID=gene-LDO49_RS18715;Name=LDO49_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18715;old_locus_tag=BCEP4_250044 NZ_CAJZAV010000168.1 Protein Homology CDS 39692 40477 . - 0 ID=cds-WP_059489523.1;Parent=gene-LDO49_RS18715;Dbxref=GenBank:WP_059489523.1;Name=WP_059489523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354185.1;locus_tag=LDO49_RS18715;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_059489523.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 40474 41643 . - . ID=gene-LDO49_RS18720;Name=LDO49_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18720;old_locus_tag=BCEP4_250045 NZ_CAJZAV010000168.1 Protein Homology CDS 40474 41643 . - 0 ID=cds-WP_060224694.1;Parent=gene-LDO49_RS18720;Dbxref=GenBank:WP_060224694.1;Name=WP_060224694.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898534.1;locus_tag=LDO49_RS18720;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_060224694.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 41648 43573 . - . ID=gene-LDO49_RS18725;Name=LDO49_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18725;old_locus_tag=BCEP4_250046 NZ_CAJZAV010000168.1 Protein Homology CDS 41648 43573 . - 0 ID=cds-WP_224052180.1;Parent=gene-LDO49_RS18725;Dbxref=GenBank:WP_224052180.1;Name=WP_224052180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018315306.1;locus_tag=LDO49_RS18725;product=(Fe-S)-binding protein;protein_id=WP_224052180.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 43577 45640 . - . ID=gene-LDO49_RS18730;Name=LDO49_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18730;old_locus_tag=BCEP4_250047 NZ_CAJZAV010000168.1 Protein Homology CDS 43577 45640 . - 0 ID=cds-WP_021160633.1;Parent=gene-LDO49_RS18730;Dbxref=GenBank:WP_021160633.1;Name=WP_021160633.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186960.1;locus_tag=LDO49_RS18730;product=NADH:flavin oxidoreductase;protein_id=WP_021160633.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 45709 46242 . - . ID=gene-LDO49_RS18735;Name=LDO49_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18735;old_locus_tag=BCEP4_250048 NZ_CAJZAV010000168.1 Protein Homology CDS 45709 46242 . - 0 ID=cds-WP_059709402.1;Parent=gene-LDO49_RS18735;Dbxref=GenBank:WP_059709402.1;Name=WP_059709402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089911.1;locus_tag=LDO49_RS18735;product=DUF5943 domain-containing protein;protein_id=WP_059709402.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 46385 47356 . - . ID=gene-LDO49_RS18740;Name=LDO49_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18740;old_locus_tag=BCEP4_250049 NZ_CAJZAV010000168.1 Protein Homology CDS 46385 47356 . - 0 ID=cds-WP_021160631.1;Parent=gene-LDO49_RS18740;Dbxref=GenBank:WP_021160631.1;Name=WP_021160631.1;Ontology_term=GO:0006508,GO:0046872,GO:0070573;gbkey=CDS;go_function=metal ion binding|0046872||IEA,metallodipeptidase activity|0070573||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017773741.1;locus_tag=LDO49_RS18740;product=dipeptidase;protein_id=WP_021160631.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 47388 48662 . - . ID=gene-LDO49_RS18745;Name=LDO49_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18745;old_locus_tag=BCEP4_250050 NZ_CAJZAV010000168.1 Protein Homology CDS 47388 48662 . - 0 ID=cds-WP_048026434.1;Parent=gene-LDO49_RS18745;Dbxref=GenBank:WP_048026434.1;Name=WP_048026434.1;Ontology_term=GO:0019264,GO:0004372,GO:0030170;gbkey=CDS;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603909.1;locus_tag=LDO49_RS18745;product=serine hydroxymethyltransferase;protein_id=WP_048026434.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 49108 50133 . + . ID=gene-LDO49_RS18750;Name=LDO49_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18750;old_locus_tag=BCEP4_250051 NZ_CAJZAV010000168.1 Protein Homology CDS 49108 50133 . + 0 ID=cds-WP_042975715.1;Parent=gene-LDO49_RS18750;Dbxref=GenBank:WP_042975715.1;Name=WP_042975715.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339532.1;locus_tag=LDO49_RS18750;product=GlxA family transcriptional regulator;protein_id=WP_042975715.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 50193 51605 . - . ID=gene-LDO49_RS18755;Name=LDO49_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18755;old_locus_tag=BCEP4_250052 NZ_CAJZAV010000168.1 Protein Homology CDS 50193 51605 . - 0 ID=cds-WP_059677180.1;Parent=gene-LDO49_RS18755;Dbxref=GenBank:WP_059677180.1;Name=WP_059677180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417011.1;locus_tag=LDO49_RS18755;product=discoidin domain-containing protein;protein_id=WP_059677180.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 51876 53297 . + . ID=gene-LDO49_RS18760;Name=LDO49_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18760;old_locus_tag=BCEP4_250053 NZ_CAJZAV010000168.1 Protein Homology CDS 51876 53297 . + 0 ID=cds-WP_059494913.1;Parent=gene-LDO49_RS18760;Dbxref=GenBank:WP_059494913.1;Name=WP_059494913.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488994.1;locus_tag=LDO49_RS18760;product=aminotransferase-like domain-containing protein;protein_id=WP_059494913.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 53562 54338 . + . ID=gene-LDO49_RS18765;Name=LDO49_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18765;old_locus_tag=BCEP4_250054 NZ_CAJZAV010000168.1 Protein Homology CDS 53562 54338 . + 0 ID=cds-WP_059494915.1;Parent=gene-LDO49_RS18765;Dbxref=GenBank:WP_059494915.1;Name=WP_059494915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547091.1;locus_tag=LDO49_RS18765;product=hypothetical protein;protein_id=WP_059494915.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 54509 55396 . + . ID=gene-LDO49_RS18770;Name=LDO49_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18770;old_locus_tag=BCEP4_250055 NZ_CAJZAV010000168.1 Protein Homology CDS 54509 55396 . + 0 ID=cds-WP_059494976.1;Parent=gene-LDO49_RS18770;Dbxref=GenBank:WP_059494976.1;Name=WP_059494976.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417000.1;locus_tag=LDO49_RS18770;product=DMT family transporter;protein_id=WP_059494976.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 55385 56299 . - . ID=gene-LDO49_RS18775;Name=LDO49_RS18775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18775;old_locus_tag=BCEP4_250056 NZ_CAJZAV010000168.1 Protein Homology CDS 55385 56299 . - 0 ID=cds-WP_060072055.1;Parent=gene-LDO49_RS18775;Dbxref=GenBank:WP_060072055.1;Name=WP_060072055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898525.1;locus_tag=LDO49_RS18775;product=LysR substrate-binding domain-containing protein;protein_id=WP_060072055.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 56532 57728 . - . ID=gene-LDO49_RS18780;Name=fdhA;gbkey=Gene;gene=fdhA;gene_biotype=protein_coding;locus_tag=LDO49_RS18780;old_locus_tag=BCEP4_250058 NZ_CAJZAV010000168.1 Protein Homology CDS 56532 57728 . - 0 ID=cds-WP_027789739.1;Parent=gene-LDO49_RS18780;Dbxref=GenBank:WP_027789739.1;Name=WP_027789739.1;Ontology_term=GO:0046292,GO:0018467;gbkey=CDS;gene=fdhA;go_function=formaldehyde dehydrogenase (NAD+) activity|0018467||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396349.1;locus_tag=LDO49_RS18780;product=formaldehyde dehydrogenase%2C glutathione-independent;protein_id=WP_027789739.1;transl_table=11 NZ_CAJZAV010000168.1 RefSeq gene 57983 59173 . - . ID=gene-LDO49_RS18785;Name=LDO49_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18785;old_locus_tag=BCEP4_250059 NZ_CAJZAV010000168.1 Protein Homology CDS 57983 59173 . - 0 ID=cds-WP_021160621.1;Parent=gene-LDO49_RS18785;Dbxref=GenBank:WP_021160621.1;Name=WP_021160621.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498736.1;locus_tag=LDO49_RS18785;product=HlyD family secretion protein;protein_id=WP_021160621.1;transl_table=11 ##sequence-region NZ_CAJZAV010000169.1 1 3382 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000169.1 RefSeq region 1 3382 . + . ID=NZ_CAJZAV010000169.1:1..3382;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_250 NZ_CAJZAV010000169.1 RefSeq pseudogene 1 787 . - . ID=gene-LDO49_RS18790;Name=LDO49_RS18790;end_range=787,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS18790;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000169.1 Protein Homology CDS 1 787 . - 0 ID=cds-LDO49_RS18790;Parent=gene-LDO49_RS18790;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0004803;end_range=787,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492556.1;locus_tag=LDO49_RS18790;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000169.1 RefSeq pseudogene 773 1873 . + . ID=gene-LDO49_RS18795;Name=LDO49_RS18795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS18795;old_locus_tag=BCEP4_2500002;partial=true;pseudo=true;start_range=.,773 NZ_CAJZAV010000169.1 Protein Homology CDS 773 1873 . + 0 ID=cds-LDO49_RS18795;Parent=gene-LDO49_RS18795;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659370.1;locus_tag=LDO49_RS18795;partial=true;product=haloacid dehalogenase-like hydrolase;pseudo=true;start_range=.,773;transl_table=11 NZ_CAJZAV010000169.1 RefSeq gene 1964 2737 . - . ID=gene-LDO49_RS18800;Name=LDO49_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18800;old_locus_tag=BCEP4_2500003 NZ_CAJZAV010000169.1 Protein Homology CDS 1964 2737 . - 0 ID=cds-WP_060070552.1;Parent=gene-LDO49_RS18800;Dbxref=GenBank:WP_060070552.1;Name=WP_060070552.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354319.1;locus_tag=LDO49_RS18800;product=slipin family protein;protein_id=WP_060070552.1;transl_table=11 NZ_CAJZAV010000169.1 RefSeq gene 2734 3382 . - . ID=gene-LDO49_RS18805;Name=LDO49_RS18805;end_range=3382,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18805;old_locus_tag=BCEP4_2500004;partial=true NZ_CAJZAV010000169.1 Protein Homology CDS 2734 3382 . - 1 ID=cds-WP_290369866.1;Parent=gene-LDO49_RS18805;Dbxref=GenBank:WP_290369866.1;Name=WP_290369866.1;Ontology_term=GO:0005886,GO:0016020;end_range=3382,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493499.1;locus_tag=LDO49_RS18805;partial=true;product=NfeD family protein;protein_id=WP_290369866.1;transl_table=11 ##sequence-region NZ_CAJZAV010000170.1 1 7477 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000170.1 RefSeq region 1 7477 . + . ID=NZ_CAJZAV010000170.1:1..7477;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_251 NZ_CAJZAV010000170.1 RefSeq gene 1 529 . + . ID=gene-LDO49_RS18810;Name=LDO49_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18810;old_locus_tag=BCEP4_2510001;partial=true;start_range=.,1 NZ_CAJZAV010000170.1 Protein Homology CDS 1 529 . + 1 ID=cds-WP_224052182.1;Parent=gene-LDO49_RS18810;Dbxref=GenBank:WP_224052182.1;Name=WP_224052182.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899744.1;locus_tag=LDO49_RS18810;partial=true;product=NAD-binding protein;protein_id=WP_224052182.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000170.1 RefSeq gene 651 983 . - . ID=gene-LDO49_RS18815;Name=LDO49_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18815;old_locus_tag=BCEP4_2510002 NZ_CAJZAV010000170.1 Protein Homology CDS 651 983 . - 0 ID=cds-WP_042978286.1;Parent=gene-LDO49_RS18815;Dbxref=GenBank:WP_042978286.1;Name=WP_042978286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548018.1;locus_tag=LDO49_RS18815;product=hypothetical protein;protein_id=WP_042978286.1;transl_table=11 NZ_CAJZAV010000170.1 RefSeq gene 1492 2256 . + . ID=gene-LDO49_RS18820;Name=LDO49_RS18820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18820;old_locus_tag=BCEP4_2510004 NZ_CAJZAV010000170.1 Protein Homology CDS 1492 2256 . + 0 ID=cds-WP_048025767.1;Parent=gene-LDO49_RS18820;Dbxref=GenBank:WP_048025767.1;Name=WP_048025767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754364.1;locus_tag=LDO49_RS18820;product=DUF4397 domain-containing protein;protein_id=WP_048025767.1;transl_table=11 NZ_CAJZAV010000170.1 RefSeq gene 2363 2920 . - . ID=gene-LDO49_RS18825;Name=LDO49_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18825;old_locus_tag=BCEP4_2510005 NZ_CAJZAV010000170.1 Protein Homology CDS 2363 2920 . - 0 ID=cds-WP_059484232.1;Parent=gene-LDO49_RS18825;Dbxref=GenBank:WP_059484232.1;Name=WP_059484232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416577.1;locus_tag=LDO49_RS18825;product=DUF3005 domain-containing protein;protein_id=WP_059484232.1;transl_table=11 NZ_CAJZAV010000170.1 RefSeq gene 3096 3368 . + . ID=gene-LDO49_RS18830;Name=LDO49_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18830;old_locus_tag=BCEP4_2510006 NZ_CAJZAV010000170.1 GeneMarkS-2+ CDS 3096 3368 . + 0 ID=cds-WP_224052183.1;Parent=gene-LDO49_RS18830;Dbxref=GenBank:WP_224052183.1;Name=WP_224052183.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS18830;product=hypothetical protein;protein_id=WP_224052183.1;transl_table=11 NZ_CAJZAV010000170.1 RefSeq gene 3607 5157 . + . ID=gene-LDO49_RS18835;Name=LDO49_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18835;old_locus_tag=BCEP4_2510007 NZ_CAJZAV010000170.1 Protein Homology CDS 3607 5157 . + 0 ID=cds-WP_091924671.1;Parent=gene-LDO49_RS18835;Dbxref=GenBank:WP_091924671.1;Name=WP_091924671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338428.1;locus_tag=LDO49_RS18835;product=NCS1 family nucleobase:cation symporter-1;protein_id=WP_091924671.1;transl_table=11 NZ_CAJZAV010000170.1 RefSeq gene 5180 5908 . + . ID=gene-LDO49_RS18840;Name=LDO49_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18840;old_locus_tag=BCEP4_2510008 NZ_CAJZAV010000170.1 Protein Homology CDS 5180 5908 . + 0 ID=cds-WP_224052184.1;Parent=gene-LDO49_RS18840;Dbxref=GenBank:WP_224052184.1;Name=WP_224052184.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488622.1;locus_tag=LDO49_RS18840;product=aspartate/glutamate racemase family protein;protein_id=WP_224052184.1;transl_table=11 NZ_CAJZAV010000170.1 RefSeq gene 5970 7274 . + . ID=gene-LDO49_RS18845;Name=LDO49_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18845;old_locus_tag=BCEP4_2510009 NZ_CAJZAV010000170.1 Protein Homology CDS 5970 7274 . + 0 ID=cds-WP_224052185.1;Parent=gene-LDO49_RS18845;Dbxref=GenBank:WP_224052185.1;Name=WP_224052185.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355638.1;locus_tag=LDO49_RS18845;product=LysR family transcriptional regulator;protein_id=WP_224052185.1;transl_table=11 ##sequence-region NZ_CAJZAV010000171.1 1 875 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000171.1 RefSeq region 1 875 . + . ID=NZ_CAJZAV010000171.1:1..875;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_252 NZ_CAJZAV010000171.1 RefSeq pseudogene 1 378 . + . ID=gene-LDO49_RS18850;Name=LDO49_RS18850;end_range=378,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS18850;old_locus_tag=BCEP4_2520001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000171.1 Protein Homology CDS 1 378 . + 2 ID=cds-LDO49_RS18850;Parent=gene-LDO49_RS18850;Note=frameshifted%3B incomplete%3B missing N-terminus and C-terminus;end_range=378,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763239.1;locus_tag=LDO49_RS18850;partial=true;product=LysR substrate-binding domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000171.1 RefSeq pseudogene 677 875 . + . ID=gene-LDO49_RS37410;Name=LDO49_RS37410;end_range=875,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37410;partial=true;pseudo=true NZ_CAJZAV010000171.1 Protein Homology CDS 677 875 . + 0 ID=cds-LDO49_RS37410;Parent=gene-LDO49_RS37410;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=875,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329347.1;locus_tag=LDO49_RS37410;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000172.1 1 11295 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000172.1 RefSeq region 1 11295 . + . ID=NZ_CAJZAV010000172.1:1..11295;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_253 NZ_CAJZAV010000172.1 RefSeq gene 1 219 . - . ID=gene-LDO49_RS38185;Name=LDO49_RS38185;end_range=219,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38185;partial=true;start_range=.,1 NZ_CAJZAV010000172.1 Protein Homology CDS 1 219 . - 0 ID=cds-WP_443797978.1;Parent=gene-LDO49_RS38185;Dbxref=GenBank:WP_443797978.1;Name=WP_443797978.1;end_range=219,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656613.1;locus_tag=LDO49_RS38185;partial=true;product=YbfB/YjiJ family MFS transporter;protein_id=WP_443797978.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000172.1 RefSeq gene 230 754 . - . ID=gene-LDO49_RS18860;Name=LDO49_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18860;old_locus_tag=BCEP4_2530002;partial=true;start_range=.,230 NZ_CAJZAV010000172.1 Protein Homology CDS 230 754 . - 0 ID=cds-WP_443797979.1;Parent=gene-LDO49_RS18860;Dbxref=GenBank:WP_443797979.1;Name=WP_443797979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351721.1;locus_tag=LDO49_RS18860;partial=true;product=YbfB/YjiJ family MFS transporter;protein_id=WP_443797979.1;start_range=.,230;transl_table=11 NZ_CAJZAV010000172.1 RefSeq gene 879 1793 . + . ID=gene-LDO49_RS18865;Name=LDO49_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18865;old_locus_tag=BCEP4_2530003 NZ_CAJZAV010000172.1 Protein Homology CDS 879 1793 . + 0 ID=cds-WP_059486871.1;Parent=gene-LDO49_RS18865;Dbxref=GenBank:WP_059486871.1;Name=WP_059486871.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328334.1;locus_tag=LDO49_RS18865;product=LysR family transcriptional regulator;protein_id=WP_059486871.1;transl_table=11 NZ_CAJZAV010000172.1 RefSeq gene 2026 4650 . - . ID=gene-LDO49_RS18870;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=LDO49_RS18870;old_locus_tag=BCEP4_2530004 NZ_CAJZAV010000172.1 Protein Homology CDS 2026 4650 . - 0 ID=cds-WP_059816000.1;Parent=gene-LDO49_RS18870;Dbxref=GenBank:WP_059816000.1;Name=WP_059816000.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401005.1;locus_tag=LDO49_RS18870;product=alanine--tRNA ligase;protein_id=WP_059816000.1;transl_table=11 NZ_CAJZAV010000172.1 RefSeq gene 4900 6120 . + . ID=gene-LDO49_RS18875;Name=LDO49_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18875;old_locus_tag=BCEP4_2530005 NZ_CAJZAV010000172.1 Protein Homology CDS 4900 6120 . + 0 ID=cds-WP_060074689.1;Parent=gene-LDO49_RS18875;Dbxref=GenBank:WP_060074689.1;Name=WP_060074689.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754069.1;locus_tag=LDO49_RS18875;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_060074689.1;transl_table=11 NZ_CAJZAV010000172.1 RefSeq gene 6205 6759 . - . ID=gene-LDO49_RS18880;Name=LDO49_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18880;old_locus_tag=BCEP4_2530006 NZ_CAJZAV010000172.1 Protein Homology CDS 6205 6759 . - 0 ID=cds-WP_060074690.1;Parent=gene-LDO49_RS18880;Dbxref=GenBank:WP_060074690.1;Name=WP_060074690.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897298.1;locus_tag=LDO49_RS18880;product=RBBP9/YdeN family alpha/beta hydrolase;protein_id=WP_060074690.1;transl_table=11 NZ_CAJZAV010000172.1 RefSeq gene 6939 7148 . - . ID=gene-LDO49_RS18885;Name=LDO49_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18885;old_locus_tag=BCEP4_2530007 NZ_CAJZAV010000172.1 Protein Homology CDS 6939 7148 . - 0 ID=cds-WP_011351716.1;Parent=gene-LDO49_RS18885;Dbxref=GenBank:WP_011351716.1;Name=WP_011351716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884418.1;locus_tag=LDO49_RS18885;product=ornithine acetyltransferase;protein_id=WP_011351716.1;transl_table=11 NZ_CAJZAV010000172.1 RefSeq gene 7393 9102 . + . ID=gene-LDO49_RS18890;Name=LDO49_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18890;old_locus_tag=BCEP4_2530008 NZ_CAJZAV010000172.1 Protein Homology CDS 7393 9102 . + 0 ID=cds-WP_027787758.1;Parent=gene-LDO49_RS18890;Dbxref=GenBank:WP_027787758.1;Name=WP_027787758.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764572.1;locus_tag=LDO49_RS18890;product=glutamine--tRNA ligase/YqeY domain fusion protein;protein_id=WP_027787758.1;transl_table=11 NZ_CAJZAV010000172.1 RefSeq gene 9228 9647 . - . ID=gene-LDO49_RS37560;Name=LDO49_RS37560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37560 NZ_CAJZAV010000172.1 Protein Homology CDS 9228 9647 . - 0 ID=cds-WP_063812003.1;Parent=gene-LDO49_RS37560;Dbxref=GenBank:WP_063812003.1;Name=WP_063812003.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:NF017315.6;locus_tag=LDO49_RS37560;product=PAAR domain-containing protein;protein_id=WP_063812003.1;transl_table=11 NZ_CAJZAV010000172.1 RefSeq gene 9652 10821 . - . ID=gene-LDO49_RS18900;Name=LDO49_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18900 NZ_CAJZAV010000172.1 Protein Homology CDS 9652 10821 . - 0 ID=cds-WP_124475695.1;Parent=gene-LDO49_RS18900;Dbxref=GenBank:WP_124475695.1;Name=WP_124475695.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042867.4;locus_tag=LDO49_RS18900;product=DUF6708 domain-containing protein;protein_id=WP_124475695.1;transl_table=11 NZ_CAJZAV010000172.1 RefSeq gene 10822 11091 . - . ID=gene-LDO49_RS18905;Name=LDO49_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18905 NZ_CAJZAV010000172.1 GeneMarkS-2+ CDS 10822 11091 . - 0 ID=cds-WP_224052187.1;Parent=gene-LDO49_RS18905;Dbxref=GenBank:WP_224052187.1;Name=WP_224052187.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS18905;product=hypothetical protein;protein_id=WP_224052187.1;transl_table=11 ##sequence-region NZ_CAJZAV010000173.1 1 9073 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000173.1 RefSeq region 1 9073 . + . ID=NZ_CAJZAV010000173.1:1..9073;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_254 NZ_CAJZAV010000173.1 RefSeq gene 1 436 . + . ID=gene-LDO49_RS18910;Name=LDO49_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18910;old_locus_tag=BCEP4_2540001;partial=true;start_range=.,1 NZ_CAJZAV010000173.1 Protein Homology CDS 1 436 . + 1 ID=cds-WP_224052188.1;Parent=gene-LDO49_RS18910;Dbxref=GenBank:WP_224052188.1;Name=WP_224052188.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355346.1;locus_tag=LDO49_RS18910;partial=true;product=HlyD family secretion protein;protein_id=WP_224052188.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000173.1 RefSeq gene 433 930 . + . ID=gene-LDO49_RS38190;Name=LDO49_RS38190;end_range=930,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38190;partial=true NZ_CAJZAV010000173.1 Protein Homology CDS 433 930 . + 0 ID=cds-WP_443797980.1;Parent=gene-LDO49_RS38190;Dbxref=GenBank:WP_443797980.1;Name=WP_443797980.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;end_range=930,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658707.1;locus_tag=LDO49_RS38190;partial=true;product=ABC transporter ATP-binding protein;protein_id=WP_443797980.1;transl_table=11 NZ_CAJZAV010000173.1 RefSeq pseudogene 941 1425 . + . ID=gene-LDO49_RS38195;Name=LDO49_RS38195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38195;old_locus_tag=BCEP4_2540003;partial=true;pseudo=true;start_range=.,941 NZ_CAJZAV010000173.1 Protein Homology CDS 941 1425 . + 2 ID=cds-LDO49_RS38195;Parent=gene-LDO49_RS38195;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003278425.1;locus_tag=LDO49_RS38195;partial=true;product=ABC transporter ATP-binding protein;pseudo=true;start_range=.,941;transl_table=11 NZ_CAJZAV010000173.1 RefSeq gene 1422 2576 . + . ID=gene-LDO49_RS18920;Name=LDO49_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18920;old_locus_tag=BCEP4_2540004 NZ_CAJZAV010000173.1 Protein Homology CDS 1422 2576 . + 0 ID=cds-WP_048023160.1;Parent=gene-LDO49_RS18920;Dbxref=GenBank:WP_048023160.1;Name=WP_048023160.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658706.1;locus_tag=LDO49_RS18920;product=ABC transporter permease;protein_id=WP_048023160.1;transl_table=11 NZ_CAJZAV010000173.1 RefSeq gene 2587 4077 . + . ID=gene-LDO49_RS18925;Name=LDO49_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18925;old_locus_tag=BCEP4_2540005 NZ_CAJZAV010000173.1 Protein Homology CDS 2587 4077 . + 0 ID=cds-WP_224052189.1;Parent=gene-LDO49_RS18925;Dbxref=GenBank:WP_224052189.1;Name=WP_224052189.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355349.1;locus_tag=LDO49_RS18925;product=efflux transporter outer membrane subunit;protein_id=WP_224052189.1;transl_table=11 NZ_CAJZAV010000173.1 RefSeq gene 4208 5407 . - . ID=gene-LDO49_RS18930;Name=LDO49_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18930;old_locus_tag=BCEP4_2540006 NZ_CAJZAV010000173.1 Protein Homology CDS 4208 5407 . - 0 ID=cds-WP_060309135.1;Parent=gene-LDO49_RS18930;Dbxref=GenBank:WP_060309135.1;Name=WP_060309135.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397190.1;locus_tag=LDO49_RS18930;product=porin;protein_id=WP_060309135.1;transl_table=11 NZ_CAJZAV010000173.1 RefSeq gene 5887 6951 . - . ID=gene-LDO49_RS18935;Name=LDO49_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18935;old_locus_tag=BCEP4_2540007 NZ_CAJZAV010000173.1 Protein Homology CDS 5887 6951 . - 0 ID=cds-WP_124841332.1;Parent=gene-LDO49_RS18935;Dbxref=GenBank:WP_124841332.1;Name=WP_124841332.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355351.1;locus_tag=LDO49_RS18935;product=phytoene/squalene synthase family protein;protein_id=WP_124841332.1;transl_table=11 NZ_CAJZAV010000173.1 RefSeq gene 7327 8472 . + . ID=gene-LDO49_RS18940;Name=LDO49_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18940;old_locus_tag=BCEP4_2540008 NZ_CAJZAV010000173.1 Protein Homology CDS 7327 8472 . + 0 ID=cds-WP_124841333.1;Parent=gene-LDO49_RS18940;Dbxref=GenBank:WP_124841333.1;Name=WP_124841333.1;Ontology_term=GO:0006071,GO:0006629,GO:0008889;gbkey=CDS;go_function=glycerophosphodiester phosphodiesterase activity|0008889||IEA;go_process=glycerol metabolic process|0006071||IEA,lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414326.1;locus_tag=LDO49_RS18940;product=glycerophosphodiester phosphodiesterase;protein_id=WP_124841333.1;transl_table=11 NZ_CAJZAV010000173.1 RefSeq gene 8534 9073 . - . ID=gene-LDO49_RS18945;Name=LDO49_RS18945;end_range=9073,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18945;old_locus_tag=BCEP4_2540009;partial=true NZ_CAJZAV010000173.1 Protein Homology CDS 8534 9073 . - 0 ID=cds-WP_253074682.1;Parent=gene-LDO49_RS18945;Dbxref=GenBank:WP_253074682.1;Name=WP_253074682.1;end_range=9073,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365959.1;locus_tag=LDO49_RS18945;partial=true;product=rhodanese-like domain-containing protein;protein_id=WP_253074682.1;transl_table=11 ##sequence-region NZ_CAJZAV010000174.1 1 10347 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000174.1 RefSeq region 1 10347 . + . ID=NZ_CAJZAV010000174.1:1..10347;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_255 NZ_CAJZAV010000174.1 RefSeq gene 87 1589 . - . ID=gene-LDO49_RS18950;Name=LDO49_RS18950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18950;old_locus_tag=BCEP4_2550001 NZ_CAJZAV010000174.1 Protein Homology CDS 87 1589 . - 0 ID=cds-WP_021163647.1;Parent=gene-LDO49_RS18950;Dbxref=GenBank:WP_021163647.1;Name=WP_021163647.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755269.1;locus_tag=LDO49_RS18950;product=APC family permease;protein_id=WP_021163647.1;transl_table=11 NZ_CAJZAV010000174.1 RefSeq gene 1826 3166 . - . ID=gene-LDO49_RS18955;Name=LDO49_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18955;old_locus_tag=BCEP4_2550002 NZ_CAJZAV010000174.1 Protein Homology CDS 1826 3166 . - 0 ID=cds-WP_059812879.1;Parent=gene-LDO49_RS18955;Dbxref=GenBank:WP_059812879.1;Name=WP_059812879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755270.1;locus_tag=LDO49_RS18955;product=aspartate aminotransferase family protein;protein_id=WP_059812879.1;transl_table=11 NZ_CAJZAV010000174.1 RefSeq gene 3237 4739 . - . ID=gene-LDO49_RS18960;Name=LDO49_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18960;old_locus_tag=BCEP4_2550003 NZ_CAJZAV010000174.1 Protein Homology CDS 3237 4739 . - 0 ID=cds-WP_021163649.1;Parent=gene-LDO49_RS18960;Dbxref=GenBank:WP_021163649.1;Name=WP_021163649.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755271.1;locus_tag=LDO49_RS18960;product=aldehyde dehydrogenase family protein;protein_id=WP_021163649.1;transl_table=11 NZ_CAJZAV010000174.1 RefSeq gene 4931 5128 . - . ID=gene-LDO49_RS18965;Name=LDO49_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18965;old_locus_tag=BCEP4_2550004 NZ_CAJZAV010000174.1 Protein Homology CDS 4931 5128 . - 0 ID=cds-WP_224052190.1;Parent=gene-LDO49_RS18965;Dbxref=GenBank:WP_224052190.1;Name=WP_224052190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496859.1;locus_tag=LDO49_RS18965;product=hypothetical protein;protein_id=WP_224052190.1;transl_table=11 NZ_CAJZAV010000174.1 RefSeq gene 5227 5868 . - . ID=gene-LDO49_RS18970;Name=LDO49_RS18970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18970;old_locus_tag=BCEP4_2550005 NZ_CAJZAV010000174.1 Protein Homology CDS 5227 5868 . - 0 ID=cds-WP_224052191.1;Parent=gene-LDO49_RS18970;Dbxref=GenBank:WP_224052191.1;Name=WP_224052191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659156.1;locus_tag=LDO49_RS18970;product=hypothetical protein;protein_id=WP_224052191.1;transl_table=11 NZ_CAJZAV010000174.1 RefSeq gene 5962 6702 . - . ID=gene-LDO49_RS18975;Name=LDO49_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18975;old_locus_tag=BCEP4_2550006 NZ_CAJZAV010000174.1 Protein Homology CDS 5962 6702 . - 0 ID=cds-WP_059856158.1;Parent=gene-LDO49_RS18975;Dbxref=GenBank:WP_059856158.1;Name=WP_059856158.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467999.1;locus_tag=LDO49_RS18975;product=helix-turn-helix transcriptional regulator;protein_id=WP_059856158.1;transl_table=11 NZ_CAJZAV010000174.1 RefSeq gene 6949 7830 . - . ID=gene-LDO49_RS18980;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=LDO49_RS18980;old_locus_tag=BCEP4_2550007 NZ_CAJZAV010000174.1 Protein Homology CDS 6949 7830 . - 0 ID=cds-WP_021163653.1;Parent=gene-LDO49_RS18980;Dbxref=GenBank:WP_021163653.1;Name=WP_021163653.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483975.1;locus_tag=LDO49_RS18980;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_021163653.1;transl_table=11 NZ_CAJZAV010000174.1 RefSeq gene 8224 9015 . + . ID=gene-LDO49_RS18985;Name=LDO49_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18985;old_locus_tag=BCEP4_2550008 NZ_CAJZAV010000174.1 Protein Homology CDS 8224 9015 . + 0 ID=cds-WP_224052192.1;Parent=gene-LDO49_RS18985;Dbxref=GenBank:WP_224052192.1;Name=WP_224052192.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547357.1;locus_tag=LDO49_RS18985;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_224052192.1;transl_table=11 NZ_CAJZAV010000174.1 RefSeq gene 9207 10265 . + . ID=gene-LDO49_RS18990;Name=LDO49_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18990;old_locus_tag=BCEP4_2550009 NZ_CAJZAV010000174.1 Protein Homology CDS 9207 10265 . + 0 ID=cds-WP_059619258.1;Parent=gene-LDO49_RS18990;Dbxref=GenBank:WP_059619258.1;Name=WP_059619258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898839.1;locus_tag=LDO49_RS18990;product=LysR family transcriptional regulator;protein_id=WP_059619258.1;transl_table=11 ##sequence-region NZ_CAJZAV010000175.1 1 2835 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000175.1 RefSeq region 1 2835 . + . ID=NZ_CAJZAV010000175.1:1..2835;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_256 NZ_CAJZAV010000175.1 RefSeq gene 1 369 . - . ID=gene-LDO49_RS18995;Name=LDO49_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS18995;partial=true;start_range=.,1 NZ_CAJZAV010000175.1 Protein Homology CDS 1 369 . - 0 ID=cds-WP_224052194.1;Parent=gene-LDO49_RS18995;Dbxref=GenBank:WP_224052194.1;Name=WP_224052194.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400599.1;locus_tag=LDO49_RS18995;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_224052194.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000175.1 cmsearch riboswitch 595 718 . - . ID=id-NZ_CAJZAV010000175.1:595..718;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAV010000175.1 RefSeq gene 988 2757 . + . ID=gene-LDO49_RS19000;Name=LDO49_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19000;old_locus_tag=BCEP4_2560003 NZ_CAJZAV010000175.1 Protein Homology CDS 988 2757 . + 0 ID=cds-WP_021163928.1;Parent=gene-LDO49_RS19000;Dbxref=GenBank:WP_021163928.1;Name=WP_021163928.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400601.1;locus_tag=LDO49_RS19000;product=ABC transporter ATP-binding protein/permease;protein_id=WP_021163928.1;transl_table=11 ##sequence-region NZ_CAJZAV010000176.1 1 6431 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000176.1 RefSeq region 1 6431 . + . ID=NZ_CAJZAV010000176.1:1..6431;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_257 NZ_CAJZAV010000176.1 RefSeq gene 1 142 . - . ID=gene-LDO49_RS38200;Name=LDO49_RS38200;end_range=142,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38200;partial=true;start_range=.,1 NZ_CAJZAV010000176.1 Protein Homology CDS 1 142 . - 2 ID=cds-WP_443797981.1;Parent=gene-LDO49_RS38200;Dbxref=GenBank:WP_443797981.1;Name=WP_443797981.1;Ontology_term=GO:0006520,GO:0008851;end_range=142,.;gbkey=CDS;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362787.1;locus_tag=LDO49_RS38200;partial=true;product=ethanolamine ammonia-lyase light chain EutC;protein_id=WP_443797981.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000176.1 RefSeq gene 153 368 . - . ID=gene-LDO49_RS38205;Name=LDO49_RS38205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38205;partial=true;start_range=.,153 NZ_CAJZAV010000176.1 Protein Homology CDS 153 368 . - 0 ID=cds-WP_443797982.1;Parent=gene-LDO49_RS38205;Dbxref=GenBank:WP_443797982.1;Name=WP_443797982.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762946.1;locus_tag=LDO49_RS38205;partial=true;product=ethanolamine ammonia-lyase light chain EutC;protein_id=WP_443797982.1;start_range=.,153;transl_table=11 NZ_CAJZAV010000176.1 RefSeq gene 347 1744 . - . ID=gene-LDO49_RS19010;Name=LDO49_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19010;old_locus_tag=BCEP4_2570003 NZ_CAJZAV010000176.1 Protein Homology CDS 347 1744 . - 0 ID=cds-WP_021164101.1;Parent=gene-LDO49_RS19010;Dbxref=GenBank:WP_021164101.1;Name=WP_021164101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762947.1;locus_tag=LDO49_RS19010;product=ethanolamine ammonia-lyase subunit EutB;protein_id=WP_021164101.1;transl_table=11 NZ_CAJZAV010000176.1 RefSeq gene 1840 3252 . - . ID=gene-LDO49_RS19015;Name=eat;gbkey=Gene;gene=eat;gene_biotype=protein_coding;locus_tag=LDO49_RS19015;old_locus_tag=BCEP4_2570004 NZ_CAJZAV010000176.1 Protein Homology CDS 1840 3252 . - 0 ID=cds-WP_059620833.1;Parent=gene-LDO49_RS19015;Dbxref=GenBank:WP_059620833.1;Name=WP_059620833.1;Ontology_term=GO:0006865,GO:0015171,GO:0016020;gbkey=CDS;gene=eat;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195858.1;locus_tag=LDO49_RS19015;product=ethanolamine permease;protein_id=WP_059620833.1;transl_table=11 NZ_CAJZAV010000176.1 RefSeq gene 3498 4961 . - . ID=gene-LDO49_RS19020;Name=LDO49_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19020;old_locus_tag=BCEP4_2570005 NZ_CAJZAV010000176.1 Protein Homology CDS 3498 4961 . - 0 ID=cds-WP_059490291.1;Parent=gene-LDO49_RS19020;Dbxref=GenBank:WP_059490291.1;Name=WP_059490291.1;Ontology_term=GO:0055085,GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401442.1;locus_tag=LDO49_RS19020;product=mechanosensitive ion channel;protein_id=WP_059490291.1;transl_table=11 NZ_CAJZAV010000176.1 RefSeq gene 5240 6118 . + . ID=gene-LDO49_RS19025;Name=LDO49_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19025;old_locus_tag=BCEP4_2570006 NZ_CAJZAV010000176.1 Protein Homology CDS 5240 6118 . + 0 ID=cds-WP_021164104.1;Parent=gene-LDO49_RS19025;Dbxref=GenBank:WP_021164104.1;Name=WP_021164104.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350544.1;locus_tag=LDO49_RS19025;product=AraC family transcriptional regulator;protein_id=WP_021164104.1;transl_table=11 NZ_CAJZAV010000176.1 RefSeq gene 6278 6431 . - . ID=gene-LDO49_RS19030;Name=LDO49_RS19030;end_range=6431,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19030;partial=true NZ_CAJZAV010000176.1 Protein Homology CDS 6278 6431 . - 1 ID=cds-WP_224052196.1;Parent=gene-LDO49_RS19030;Dbxref=GenBank:WP_224052196.1;Name=WP_224052196.1;end_range=6431,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496297.1;locus_tag=LDO49_RS19030;partial=true;product=double zinc ribbon domain-containing protein;protein_id=WP_224052196.1;transl_table=11 ##sequence-region NZ_CAJZAV010000177.1 1 5389 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000177.1 RefSeq region 1 5389 . + . ID=NZ_CAJZAV010000177.1:1..5389;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_258 NZ_CAJZAV010000177.1 RefSeq pseudogene 1 179 . - . ID=gene-LDO49_RS37415;Name=LDO49_RS37415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37415;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000177.1 Protein Homology CDS 1 179 . - 0 ID=cds-LDO49_RS37415;Parent=gene-LDO49_RS37415;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886219.1;locus_tag=LDO49_RS37415;partial=true;product=short-chain dehydrogenase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000177.1 RefSeq pseudogene 133 288 . + . ID=gene-LDO49_RS38210;Name=LDO49_RS38210;end_range=288,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38210;partial=true;pseudo=true NZ_CAJZAV010000177.1 Protein Homology CDS 133 288 . + 0 ID=cds-LDO49_RS38210;Parent=gene-LDO49_RS38210;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=288,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334476.1;locus_tag=LDO49_RS38210;partial=true;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_CAJZAV010000177.1 RefSeq gene 299 1407 . + . ID=gene-LDO49_RS19040;Name=LDO49_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19040;old_locus_tag=BCEP4_2580003;partial=true;start_range=.,299 NZ_CAJZAV010000177.1 Protein Homology CDS 299 1407 . + 2 ID=cds-WP_443797983.1;Parent=gene-LDO49_RS19040;Dbxref=GenBank:WP_443797983.1;Name=WP_443797983.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019256186.1;locus_tag=LDO49_RS19040;partial=true;product=class I SAM-dependent methyltransferase;protein_id=WP_443797983.1;start_range=.,299;transl_table=11 NZ_CAJZAV010000177.1 RefSeq gene 1420 1614 . + . ID=gene-LDO49_RS19045;Name=LDO49_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19045;old_locus_tag=BCEP4_2580004 NZ_CAJZAV010000177.1 Protein Homology CDS 1420 1614 . + 0 ID=cds-WP_021163761.1;Parent=gene-LDO49_RS19045;Dbxref=GenBank:WP_021163761.1;Name=WP_021163761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895841.1;locus_tag=LDO49_RS19045;product=DUF2905 domain-containing protein;protein_id=WP_021163761.1;transl_table=11 NZ_CAJZAV010000177.1 RefSeq gene 1639 1860 . - . ID=gene-LDO49_RS19050;Name=LDO49_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19050;old_locus_tag=BCEP4_2580005 NZ_CAJZAV010000177.1 Protein Homology CDS 1639 1860 . - 0 ID=cds-WP_021163760.1;Parent=gene-LDO49_RS19050;Dbxref=GenBank:WP_021163760.1;Name=WP_021163760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353424.1;locus_tag=LDO49_RS19050;product=hypothetical protein;protein_id=WP_021163760.1;transl_table=11 NZ_CAJZAV010000177.1 RefSeq gene 1973 2881 . - . ID=gene-LDO49_RS19055;Name=LDO49_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19055;old_locus_tag=BCEP4_2580006 NZ_CAJZAV010000177.1 Protein Homology CDS 1973 2881 . - 0 ID=cds-WP_048026647.1;Parent=gene-LDO49_RS19055;Dbxref=GenBank:WP_048026647.1;Name=WP_048026647.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409152.1;locus_tag=LDO49_RS19055;product=carbohydrate kinase family protein;protein_id=WP_048026647.1;transl_table=11 NZ_CAJZAV010000177.1 RefSeq gene 2878 4158 . - . ID=gene-LDO49_RS19060;Name=LDO49_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19060;old_locus_tag=BCEP4_2580007 NZ_CAJZAV010000177.1 Protein Homology CDS 2878 4158 . - 0 ID=cds-WP_060070200.1;Parent=gene-LDO49_RS19060;Dbxref=GenBank:WP_060070200.1;Name=WP_060070200.1;Ontology_term=GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754116.1;locus_tag=LDO49_RS19060;product=AGE family epimerase/isomerase;protein_id=WP_060070200.1;transl_table=11 NZ_CAJZAV010000177.1 RefSeq gene 4155 5174 . - . ID=gene-LDO49_RS19065;Name=LDO49_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19065;old_locus_tag=BCEP4_2580008 NZ_CAJZAV010000177.1 Protein Homology CDS 4155 5174 . - 0 ID=cds-WP_021163757.1;Parent=gene-LDO49_RS19065;Dbxref=GenBank:WP_021163757.1;Name=WP_021163757.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398052.1;locus_tag=LDO49_RS19065;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_021163757.1;transl_table=11 ##sequence-region NZ_CAJZAV010000178.1 1 1602 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000178.1 RefSeq region 1 1602 . + . ID=NZ_CAJZAV010000178.1:1..1602;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_259 NZ_CAJZAV010000178.1 RefSeq gene 1 1600 . - . ID=gene-LDO49_RS19070;Name=LDO49_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19070;partial=true;start_range=.,1 NZ_CAJZAV010000178.1 Protein Homology CDS 1 1600 . - 0 ID=cds-WP_124475977.1;Parent=gene-LDO49_RS19070;Dbxref=GenBank:WP_124475977.1;Name=WP_124475977.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004545596.1;locus_tag=LDO49_RS19070;partial=true;product=type VI secretion system Vgr family protein;protein_id=WP_124475977.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAV010000179.1 1 43485 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000179.1 RefSeq region 1 43485 . + . ID=NZ_CAJZAV010000179.1:1..43485;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_26 NZ_CAJZAV010000179.1 RefSeq pseudogene 1 978 . + . ID=gene-LDO49_RS19075;Name=LDO49_RS19075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS19075;old_locus_tag=BCEP4_260001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000179.1 Protein Homology CDS 1 978 . + 0 ID=cds-LDO49_RS19075;Parent=gene-LDO49_RS19075;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336984.1;locus_tag=LDO49_RS19075;partial=true;product=excinuclease ABC subunit UvrA;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 1855 2895 . + . ID=gene-LDO49_RS19080;Name=LDO49_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19080;old_locus_tag=BCEP4_260004 NZ_CAJZAV010000179.1 Protein Homology CDS 1855 2895 . + 0 ID=cds-WP_060148190.1;Parent=gene-LDO49_RS19080;Dbxref=GenBank:WP_060148190.1;Name=WP_060148190.1;Ontology_term=GO:0010181,GO:0016491,GO:0070967;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749922.1;locus_tag=LDO49_RS19080;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_060148190.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 3004 3699 . + . ID=gene-LDO49_RS19085;Name=LDO49_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19085;old_locus_tag=BCEP4_260005 NZ_CAJZAV010000179.1 Protein Homology CDS 3004 3699 . + 0 ID=cds-WP_060148070.1;Parent=gene-LDO49_RS19085;Dbxref=GenBank:WP_060148070.1;Name=WP_060148070.1;Ontology_term=GO:0015031,GO:0015891,GO:0055085,GO:0031992,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=energy transducer activity|0031992||IEA;go_process=protein transport|0015031||IEA,siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481097.1;locus_tag=LDO49_RS19085;product=energy transducer TonB;protein_id=WP_060148070.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 3769 4704 . + . ID=gene-LDO49_RS19090;Name=LDO49_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19090;old_locus_tag=BCEP4_260006 NZ_CAJZAV010000179.1 Protein Homology CDS 3769 4704 . + 0 ID=cds-WP_059813250.1;Parent=gene-LDO49_RS19090;Dbxref=GenBank:WP_059813250.1;Name=WP_059813250.1;Ontology_term=GO:0015031,GO:0015252,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=proton channel activity|0015252||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759099.1;locus_tag=LDO49_RS19090;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_059813250.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 4717 5139 . + . ID=gene-LDO49_RS19095;Name=LDO49_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19095;old_locus_tag=BCEP4_260007 NZ_CAJZAV010000179.1 Protein Homology CDS 4717 5139 . + 0 ID=cds-WP_027792786.1;Parent=gene-LDO49_RS19095;Dbxref=GenBank:WP_027792786.1;Name=WP_027792786.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777874.1;locus_tag=LDO49_RS19095;product=ExbD/TolR family protein;protein_id=WP_027792786.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 5152 5583 . + . ID=gene-LDO49_RS19100;Name=LDO49_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19100;old_locus_tag=BCEP4_260008 NZ_CAJZAV010000179.1 Protein Homology CDS 5152 5583 . + 0 ID=cds-WP_059587411.1;Parent=gene-LDO49_RS19100;Dbxref=GenBank:WP_059587411.1;Name=WP_059587411.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328556.1;locus_tag=LDO49_RS19100;product=ExbD/TolR family protein;protein_id=WP_059587411.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 6335 8719 . + . ID=gene-LDO49_RS19105;Name=LDO49_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19105;old_locus_tag=BCEP4_260009 NZ_CAJZAV010000179.1 Protein Homology CDS 6335 8719 . + 0 ID=cds-WP_224052198.1;Parent=gene-LDO49_RS19105;Dbxref=GenBank:WP_224052198.1;Name=WP_224052198.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350009.1;locus_tag=LDO49_RS19105;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_224052198.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 8766 9569 . + . ID=gene-LDO49_RS19110;Name=LDO49_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19110;old_locus_tag=BCEP4_260010 NZ_CAJZAV010000179.1 Protein Homology CDS 8766 9569 . + 0 ID=cds-WP_224052199.1;Parent=gene-LDO49_RS19110;Dbxref=GenBank:WP_224052199.1;Name=WP_224052199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350008.1;locus_tag=LDO49_RS19110;product=2OG-Fe(II)-dependent halogenase WelO5 family protein;protein_id=WP_224052199.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 9572 10282 . + . ID=gene-LDO49_RS19115;Name=LDO49_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19115;old_locus_tag=BCEP4_260011 NZ_CAJZAV010000179.1 Protein Homology CDS 9572 10282 . + 0 ID=cds-WP_048027334.1;Parent=gene-LDO49_RS19115;Dbxref=GenBank:WP_048027334.1;Name=WP_048027334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350007.1;locus_tag=LDO49_RS19115;product=hypothetical protein;protein_id=WP_048027334.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 10275 11633 . + . ID=gene-LDO49_RS19120;Name=LDO49_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19120;old_locus_tag=BCEP4_260012 NZ_CAJZAV010000179.1 Protein Homology CDS 10275 11633 . + 0 ID=cds-WP_059587415.1;Parent=gene-LDO49_RS19120;Dbxref=GenBank:WP_059587415.1;Name=WP_059587415.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.6;locus_tag=LDO49_RS19120;product=MFS transporter;protein_id=WP_059587415.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 11996 14713 . + . ID=gene-LDO49_RS19125;Name=LDO49_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19125;old_locus_tag=BCEP4_260013 NZ_CAJZAV010000179.1 Protein Homology CDS 11996 14713 . + 0 ID=cds-WP_060148074.1;Parent=gene-LDO49_RS19125;Dbxref=GenBank:WP_060148074.1;Name=WP_060148074.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350004.1;locus_tag=LDO49_RS19125;product=TonB-dependent receptor;protein_id=WP_060148074.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 14809 15543 . - . ID=gene-LDO49_RS19130;Name=LDO49_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19130;old_locus_tag=BCEP4_260014 NZ_CAJZAV010000179.1 Protein Homology CDS 14809 15543 . - 0 ID=cds-WP_060148076.1;Parent=gene-LDO49_RS19130;Dbxref=GenBank:WP_060148076.1;Name=WP_060148076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498040.1;locus_tag=LDO49_RS19130;product=ABC transporter substrate-binding protein;protein_id=WP_060148076.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq pseudogene 15662 15952 . + . ID=gene-LDO49_RS19135;Name=LDO49_RS19135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS19135;old_locus_tag=BCEP4_260015;partial=true;pseudo=true;start_range=.,15662 NZ_CAJZAV010000179.1 Protein Homology CDS 15662 15952 . + 0 ID=cds-LDO49_RS19135;Parent=gene-LDO49_RS19135;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879774.1;locus_tag=LDO49_RS19135;partial=true;product=transposase;pseudo=true;start_range=.,15662;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 16762 16971 . - . ID=gene-LDO49_RS37565;Name=LDO49_RS37565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37565 NZ_CAJZAV010000179.1 Protein Homology CDS 16762 16971 . - 0 ID=cds-WP_124842541.1;Parent=gene-LDO49_RS37565;Dbxref=GenBank:WP_124842541.1;Name=WP_124842541.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF019886.6;locus_tag=LDO49_RS37565;product=sigma factor-like helix-turn-helix DNA-binding protein;protein_id=WP_124842541.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 17995 20775 . + . ID=gene-LDO49_RS19145;Name=LDO49_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19145;old_locus_tag=BCEP4_260020 NZ_CAJZAV010000179.1 Protein Homology CDS 17995 20775 . + 0 ID=cds-WP_124842539.1;Parent=gene-LDO49_RS19145;Dbxref=GenBank:WP_124842539.1;Name=WP_124842539.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011695166.1;locus_tag=LDO49_RS19145;product=type VI secretion system Vgr family protein;protein_id=WP_124842539.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 20811 22748 . + . ID=gene-LDO49_RS19150;Name=LDO49_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19150;old_locus_tag=BCEP4_260021 NZ_CAJZAV010000179.1 Protein Homology CDS 20811 22748 . + 0 ID=cds-WP_224052201.1;Parent=gene-LDO49_RS19150;Dbxref=GenBank:WP_224052201.1;Name=WP_224052201.1;Ontology_term=GO:0016042,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029531.1;locus_tag=LDO49_RS19150;product=esterase/lipase family protein;protein_id=WP_224052201.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 22745 23782 . + . ID=gene-LDO49_RS19155;Name=LDO49_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19155 NZ_CAJZAV010000179.1 Protein Homology CDS 22745 23782 . + 0 ID=cds-WP_308043933.1;Parent=gene-LDO49_RS19155;Dbxref=GenBank:WP_308043933.1;Name=WP_308043933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484527.1;locus_tag=LDO49_RS19155;product=T6SS immunity protein Tli4 family protein;protein_id=WP_308043933.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 23794 24081 . + . ID=gene-LDO49_RS19160;Name=LDO49_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19160;old_locus_tag=BCEP4_260023 NZ_CAJZAV010000179.1 Protein Homology CDS 23794 24081 . + 0 ID=cds-WP_081070513.1;Parent=gene-LDO49_RS19160;Dbxref=GenBank:WP_081070513.1;Name=WP_081070513.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029250.1;locus_tag=LDO49_RS19160;product=PAAR domain-containing protein;protein_id=WP_081070513.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 24133 24387 . - . ID=gene-LDO49_RS19165;Name=LDO49_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19165;old_locus_tag=BCEP4_260024 NZ_CAJZAV010000179.1 Protein Homology CDS 24133 24387 . - 0 ID=cds-WP_253074683.1;Parent=gene-LDO49_RS19165;Dbxref=GenBank:WP_253074683.1;Name=WP_253074683.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329214.1;locus_tag=LDO49_RS19165;product=H-NS histone family protein;protein_id=WP_253074683.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 24670 26133 . + . ID=gene-LDO49_RS19170;Name=LDO49_RS19170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19170;old_locus_tag=BCEP4_260025 NZ_CAJZAV010000179.1 Protein Homology CDS 24670 26133 . + 0 ID=cds-WP_124842535.1;Parent=gene-LDO49_RS19170;Dbxref=GenBank:WP_124842535.1;Name=WP_124842535.1;Ontology_term=GO:0003676,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007181906.1;locus_tag=LDO49_RS19170;product=DEAD/DEAH box helicase;protein_id=WP_124842535.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 26298 26897 . + . ID=gene-LDO49_RS19175;Name=LDO49_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19175;old_locus_tag=BCEP4_260026 NZ_CAJZAV010000179.1 Protein Homology CDS 26298 26897 . + 0 ID=cds-WP_021156583.1;Parent=gene-LDO49_RS19175;Dbxref=GenBank:WP_021156583.1;Name=WP_021156583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019652706.1;locus_tag=LDO49_RS19175;product=DJ-1/PfpI family protein;protein_id=WP_021156583.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 26878 27081 . - . ID=gene-LDO49_RS19180;Name=LDO49_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19180 NZ_CAJZAV010000179.1 GeneMarkS-2+ CDS 26878 27081 . - 0 ID=cds-WP_224052202.1;Parent=gene-LDO49_RS19180;Dbxref=GenBank:WP_224052202.1;Name=WP_224052202.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS19180;product=hypothetical protein;protein_id=WP_224052202.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 27078 27293 . - . ID=gene-LDO49_RS19185;Name=LDO49_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19185;old_locus_tag=BCEP4_260027 NZ_CAJZAV010000179.1 Protein Homology CDS 27078 27293 . - 0 ID=cds-WP_124842533.1;Parent=gene-LDO49_RS19185;Dbxref=GenBank:WP_124842533.1;Name=WP_124842533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012433083.1;locus_tag=LDO49_RS19185;product=hypothetical protein;protein_id=WP_124842533.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 27496 27810 . + . ID=gene-LDO49_RS19190;Name=LDO49_RS19190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19190;old_locus_tag=BCEP4_260028 NZ_CAJZAV010000179.1 Protein Homology CDS 27496 27810 . + 0 ID=cds-WP_059675537.1;Parent=gene-LDO49_RS19190;Dbxref=GenBank:WP_059675537.1;Name=WP_059675537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349940.1;locus_tag=LDO49_RS19190;product=hypothetical protein;protein_id=WP_059675537.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 27825 28730 . - . ID=gene-LDO49_RS19195;Name=LDO49_RS19195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19195;old_locus_tag=BCEP4_260029 NZ_CAJZAV010000179.1 Protein Homology CDS 27825 28730 . - 0 ID=cds-WP_060148091.1;Parent=gene-LDO49_RS19195;Dbxref=GenBank:WP_060148091.1;Name=WP_060148091.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337492.1;locus_tag=LDO49_RS19195;product=helix-turn-helix transcriptional regulator;protein_id=WP_060148091.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 29020 29967 . + . ID=gene-LDO49_RS19200;Name=LDO49_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19200;old_locus_tag=BCEP4_260030 NZ_CAJZAV010000179.1 Protein Homology CDS 29020 29967 . + 0 ID=cds-WP_060148192.1;Parent=gene-LDO49_RS19200;Dbxref=GenBank:WP_060148192.1;Name=WP_060148192.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372295.1;locus_tag=LDO49_RS19200;product=GlxA family transcriptional regulator;protein_id=WP_060148192.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 30060 30545 . - . ID=gene-LDO49_RS19205;Name=LDO49_RS19205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19205;old_locus_tag=BCEP4_260031 NZ_CAJZAV010000179.1 Protein Homology CDS 30060 30545 . - 0 ID=cds-WP_060148093.1;Parent=gene-LDO49_RS19205;Dbxref=GenBank:WP_060148093.1;Name=WP_060148093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753373.1;locus_tag=LDO49_RS19205;product=YybH family protein;protein_id=WP_060148093.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 30670 31542 . - . ID=gene-LDO49_RS19210;Name=LDO49_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19210;old_locus_tag=BCEP4_260032 NZ_CAJZAV010000179.1 Protein Homology CDS 30670 31542 . - 0 ID=cds-WP_372585854.1;Parent=gene-LDO49_RS19210;Dbxref=GenBank:WP_372585854.1;Name=WP_372585854.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479661.1;locus_tag=LDO49_RS19210;product=DJ-1/PfpI family protein;protein_id=WP_372585854.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 31677 32423 . - . ID=gene-LDO49_RS19215;Name=LDO49_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19215;old_locus_tag=BCEP4_260033 NZ_CAJZAV010000179.1 Protein Homology CDS 31677 32423 . - 0 ID=cds-WP_060148195.1;Parent=gene-LDO49_RS19215;Dbxref=GenBank:WP_060148195.1;Name=WP_060148195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759784.1;locus_tag=LDO49_RS19215;product=SDR family oxidoreductase;protein_id=WP_060148195.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 32764 33609 . - . ID=gene-LDO49_RS19220;Name=LDO49_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19220;old_locus_tag=BCEP4_260034 NZ_CAJZAV010000179.1 Protein Homology CDS 32764 33609 . - 0 ID=cds-WP_060148095.1;Parent=gene-LDO49_RS19220;Dbxref=GenBank:WP_060148095.1;Name=WP_060148095.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013594326.1;locus_tag=LDO49_RS19220;product=MBL fold metallo-hydrolase;protein_id=WP_060148095.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 33639 33965 . - . ID=gene-LDO49_RS19225;Name=LDO49_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19225;old_locus_tag=BCEP4_260035 NZ_CAJZAV010000179.1 Protein Homology CDS 33639 33965 . - 0 ID=cds-WP_060148097.1;Parent=gene-LDO49_RS19225;Dbxref=GenBank:WP_060148097.1;Name=WP_060148097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483371.1;locus_tag=LDO49_RS19225;product=hypothetical protein;protein_id=WP_060148097.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 33973 34515 . - . ID=gene-LDO49_RS19230;Name=LDO49_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19230;old_locus_tag=BCEP4_260036 NZ_CAJZAV010000179.1 Protein Homology CDS 33973 34515 . - 0 ID=cds-WP_060148099.1;Parent=gene-LDO49_RS19230;Dbxref=GenBank:WP_060148099.1;Name=WP_060148099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349919.1;locus_tag=LDO49_RS19230;product=hypothetical protein;protein_id=WP_060148099.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 34682 35635 . + . ID=gene-LDO49_RS19235;Name=LDO49_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19235;old_locus_tag=BCEP4_260037 NZ_CAJZAV010000179.1 Protein Homology CDS 34682 35635 . + 0 ID=cds-WP_060148101.1;Parent=gene-LDO49_RS19235;Dbxref=GenBank:WP_060148101.1;Name=WP_060148101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349918.1;locus_tag=LDO49_RS19235;product=LysR substrate-binding domain-containing protein;protein_id=WP_060148101.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 36312 37403 . + . ID=gene-LDO49_RS19240;Name=LDO49_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19240;old_locus_tag=BCEP4_260038 NZ_CAJZAV010000179.1 Protein Homology CDS 36312 37403 . + 0 ID=cds-WP_060148196.1;Parent=gene-LDO49_RS19240;Dbxref=GenBank:WP_060148196.1;Name=WP_060148196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754864.1;locus_tag=LDO49_RS19240;product=triacylglycerol lipase;protein_id=WP_060148196.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 38047 39540 . + . ID=gene-LDO49_RS19245;Name=LDO49_RS19245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19245;old_locus_tag=BCEP4_260040 NZ_CAJZAV010000179.1 Protein Homology CDS 38047 39540 . + 0 ID=cds-WP_060148103.1;Parent=gene-LDO49_RS19245;Dbxref=GenBank:WP_060148103.1;Name=WP_060148103.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760473.1;locus_tag=LDO49_RS19245;product=MFS transporter;protein_id=WP_060148103.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 39550 40137 . + . ID=gene-LDO49_RS19250;Name=LDO49_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19250;old_locus_tag=BCEP4_260041 NZ_CAJZAV010000179.1 Protein Homology CDS 39550 40137 . + 0 ID=cds-WP_060148104.1;Parent=gene-LDO49_RS19250;Dbxref=GenBank:WP_060148104.1;Name=WP_060148104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529373.1;locus_tag=LDO49_RS19250;product=hydrolase;protein_id=WP_060148104.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 40196 41359 . + . ID=gene-LDO49_RS19255;Name=LDO49_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19255;old_locus_tag=BCEP4_260042 NZ_CAJZAV010000179.1 Protein Homology CDS 40196 41359 . + 0 ID=cds-WP_059492983.1;Parent=gene-LDO49_RS19255;Dbxref=GenBank:WP_059492983.1;Name=WP_059492983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603286.1;locus_tag=LDO49_RS19255;product=quinone oxidoreductase family protein;protein_id=WP_059492983.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 41462 42700 . + . ID=gene-LDO49_RS19260;Name=LDO49_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19260;old_locus_tag=BCEP4_260043 NZ_CAJZAV010000179.1 Protein Homology CDS 41462 42700 . + 0 ID=cds-WP_372585855.1;Parent=gene-LDO49_RS19260;Dbxref=GenBank:WP_372585855.1;Name=WP_372585855.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760476.1;locus_tag=LDO49_RS19260;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_372585855.1;transl_table=11 NZ_CAJZAV010000179.1 RefSeq gene 42697 43485 . + . ID=gene-LDO49_RS19265;Name=LDO49_RS19265;end_range=43485,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19265;partial=true NZ_CAJZAV010000179.1 Protein Homology CDS 42697 43485 . + 0 ID=cds-WP_224052203.1;Parent=gene-LDO49_RS19265;Dbxref=GenBank:WP_224052203.1;Name=WP_224052203.1;Ontology_term=GO:0016829,GO:0046872;end_range=43485,.;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004545427.1;locus_tag=LDO49_RS19265;partial=true;product=HpcH/HpaI aldolase/citrate lyase family protein;protein_id=WP_224052203.1;transl_table=11 ##sequence-region NZ_CAJZAV010000180.1 1 537 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000180.1 RefSeq region 1 537 . + . ID=NZ_CAJZAV010000180.1:1..537;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_260 NZ_CAJZAV010000180.1 RefSeq gene 1 537 . - . ID=gene-LDO49_RS19270;Name=LDO49_RS19270;end_range=537,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19270;partial=true;start_range=.,1 NZ_CAJZAV010000180.1 Protein Homology CDS 1 537 . - 1 ID=cds-WP_253074684.1;Parent=gene-LDO49_RS19270;Dbxref=GenBank:WP_253074684.1;Name=WP_253074684.1;end_range=537,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008167165.1;locus_tag=LDO49_RS19270;partial=true;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_253074684.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAV010000181.1 1 4661 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000181.1 RefSeq region 1 4661 . + . ID=NZ_CAJZAV010000181.1:1..4661;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_261 NZ_CAJZAV010000181.1 RefSeq gene 233 1900 . + . ID=gene-LDO49_RS19275;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=LDO49_RS19275;old_locus_tag=BCEP4_2610001 NZ_CAJZAV010000181.1 Protein Homology CDS 233 1900 . + 0 ID=cds-WP_039352138.1;Parent=gene-LDO49_RS19275;Dbxref=GenBank:WP_039352138.1;Name=WP_039352138.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186903.1;locus_tag=LDO49_RS19275;product=energy-dependent translational throttle protein EttA;protein_id=WP_039352138.1;transl_table=11 NZ_CAJZAV010000181.1 RefSeq gene 2037 2660 . - . ID=gene-LDO49_RS19280;Name=LDO49_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19280;old_locus_tag=BCEP4_2610002 NZ_CAJZAV010000181.1 Protein Homology CDS 2037 2660 . - 0 ID=cds-WP_021161781.1;Parent=gene-LDO49_RS19280;Dbxref=GenBank:WP_021161781.1;Name=WP_021161781.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333684.1;locus_tag=LDO49_RS19280;product=HAD family hydrolase;protein_id=WP_021161781.1;transl_table=11 NZ_CAJZAV010000181.1 RefSeq gene 2657 3208 . - . ID=gene-LDO49_RS19285;Name=LDO49_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19285;old_locus_tag=BCEP4_2610003 NZ_CAJZAV010000181.1 Protein Homology CDS 2657 3208 . - 0 ID=cds-WP_021161782.1;Parent=gene-LDO49_RS19285;Dbxref=GenBank:WP_021161782.1;Name=WP_021161782.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758496.1;locus_tag=LDO49_RS19285;product=cysteine hydrolase family protein;protein_id=WP_021161782.1;transl_table=11 NZ_CAJZAV010000181.1 RefSeq gene 3286 4661 . - . ID=gene-LDO49_RS19290;Name=LDO49_RS19290;end_range=4661,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19290;old_locus_tag=BCEP4_2610004;partial=true NZ_CAJZAV010000181.1 Protein Homology CDS 3286 4661 . - 2 ID=cds-WP_224052205.1;Parent=gene-LDO49_RS19290;Dbxref=GenBank:WP_224052205.1;Name=WP_224052205.1;Ontology_term=GO:0006508,GO:0004177,GO:0046872,GO:0070006,GO:0016020;end_range=4661,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aminopeptidase activity|0004177||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106698.1;locus_tag=LDO49_RS19290;partial=true;product=aminopeptidase family protein P;protein_id=WP_224052205.1;transl_table=11 ##sequence-region NZ_CAJZAV010000182.1 1 4863 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000182.1 RefSeq region 1 4863 . + . ID=NZ_CAJZAV010000182.1:1..4863;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_262 NZ_CAJZAV010000182.1 RefSeq pseudogene 1 316 . + . ID=gene-LDO49_RS19295;Name=LDO49_RS19295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS19295;old_locus_tag=BCEP4_2620001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000182.1 Protein Homology CDS 1 316 . + 1 ID=cds-LDO49_RS19295;Parent=gene-LDO49_RS19295;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401436.1;locus_tag=LDO49_RS19295;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000182.1 RefSeq gene 318 746 . - . ID=gene-LDO49_RS19300;Name=LDO49_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19300;old_locus_tag=BCEP4_2620002 NZ_CAJZAV010000182.1 Protein Homology CDS 318 746 . - 0 ID=cds-WP_224052206.1;Parent=gene-LDO49_RS19300;Dbxref=GenBank:WP_224052206.1;Name=WP_224052206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655644.1;locus_tag=LDO49_RS19300;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_224052206.1;transl_table=11 NZ_CAJZAV010000182.1 RefSeq gene 1067 2593 . + . ID=gene-LDO49_RS19305;Name=exaC;gbkey=Gene;gene=exaC;gene_biotype=protein_coding;locus_tag=LDO49_RS19305;old_locus_tag=BCEP4_2620004 NZ_CAJZAV010000182.1 Protein Homology CDS 1067 2593 . + 0 ID=cds-WP_021163584.1;Parent=gene-LDO49_RS19305;Dbxref=GenBank:WP_021163584.1;Name=WP_021163584.1;Ontology_term=GO:0006068,GO:0004029;gbkey=CDS;gene=exaC;go_function=aldehyde dehydrogenase (NAD+) activity|0004029||IEA;go_process=ethanol catabolic process|0006068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489874.1;locus_tag=LDO49_RS19305;product=acetaldehyde dehydrogenase ExaC;protein_id=WP_021163584.1;transl_table=11 NZ_CAJZAV010000182.1 RefSeq gene 2959 3504 . + . ID=gene-LDO49_RS19310;Name=LDO49_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19310;old_locus_tag=BCEP4_2620005 NZ_CAJZAV010000182.1 Protein Homology CDS 2959 3504 . + 0 ID=cds-WP_060073590.1;Parent=gene-LDO49_RS19310;Dbxref=GenBank:WP_060073590.1;Name=WP_060073590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489872.1;locus_tag=LDO49_RS19310;product=hypothetical protein;protein_id=WP_060073590.1;transl_table=11 NZ_CAJZAV010000182.1 RefSeq gene 3710 4741 . + . ID=gene-LDO49_RS19315;Name=LDO49_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19315;old_locus_tag=BCEP4_2620006 NZ_CAJZAV010000182.1 Protein Homology CDS 3710 4741 . + 0 ID=cds-WP_042978041.1;Parent=gene-LDO49_RS19315;Dbxref=GenBank:WP_042978041.1;Name=WP_042978041.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362792.1;locus_tag=LDO49_RS19315;product=helix-turn-helix domain-containing protein;protein_id=WP_042978041.1;transl_table=11 ##sequence-region NZ_CAJZAV010000183.1 1 8253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000183.1 RefSeq region 1 8253 . + . ID=NZ_CAJZAV010000183.1:1..8253;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_263 NZ_CAJZAV010000183.1 RefSeq gene 1 321 . - . ID=gene-LDO49_RS19320;Name=LDO49_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19320;partial=true;start_range=.,1 NZ_CAJZAV010000183.1 Protein Homology CDS 1 321 . - 0 ID=cds-WP_224052207.1;Parent=gene-LDO49_RS19320;Dbxref=GenBank:WP_224052207.1;Name=WP_224052207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364799.1;locus_tag=LDO49_RS19320;partial=true;product=ABC-type transport auxiliary lipoprotein family protein;protein_id=WP_224052207.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000183.1 RefSeq gene 360 1289 . - . ID=gene-LDO49_RS19325;Name=LDO49_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19325;old_locus_tag=BCEP4_2630002 NZ_CAJZAV010000183.1 Protein Homology CDS 360 1289 . - 0 ID=cds-WP_060070145.1;Parent=gene-LDO49_RS19325;Dbxref=GenBank:WP_060070145.1;Name=WP_060070145.1;Ontology_term=GO:0015914;gbkey=CDS;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353342.1;locus_tag=LDO49_RS19325;product=MlaD family protein;protein_id=WP_060070145.1;transl_table=11 NZ_CAJZAV010000183.1 RefSeq gene 1308 2222 . - . ID=gene-LDO49_RS19330;Name=LDO49_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19330;old_locus_tag=BCEP4_2630003 NZ_CAJZAV010000183.1 Protein Homology CDS 1308 2222 . - 0 ID=cds-WP_021164214.1;Parent=gene-LDO49_RS19330;Dbxref=GenBank:WP_021164214.1;Name=WP_021164214.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353343.1;locus_tag=LDO49_RS19330;product=ABC transporter ATP-binding protein;protein_id=WP_021164214.1;transl_table=11 NZ_CAJZAV010000183.1 RefSeq gene 2219 3343 . - . ID=gene-LDO49_RS19335;Name=LDO49_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19335;old_locus_tag=BCEP4_2630004 NZ_CAJZAV010000183.1 Protein Homology CDS 2219 3343 . - 0 ID=cds-WP_021164213.1;Parent=gene-LDO49_RS19335;Dbxref=GenBank:WP_021164213.1;Name=WP_021164213.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329299.1;locus_tag=LDO49_RS19335;product=MlaE family ABC transporter permease;protein_id=WP_021164213.1;transl_table=11 NZ_CAJZAV010000183.1 RefSeq gene 3637 5694 . + . ID=gene-LDO49_RS19340;Name=LDO49_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19340;old_locus_tag=BCEP4_2630005 NZ_CAJZAV010000183.1 Protein Homology CDS 3637 5694 . + 0 ID=cds-WP_124476000.1;Parent=gene-LDO49_RS19340;Dbxref=GenBank:WP_124476000.1;Name=WP_124476000.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329300.1;locus_tag=LDO49_RS19340;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_124476000.1;transl_table=11 NZ_CAJZAV010000183.1 RefSeq gene 5703 6548 . + . ID=gene-LDO49_RS19345;Name=LDO49_RS19345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19345;old_locus_tag=BCEP4_2630006 NZ_CAJZAV010000183.1 Protein Homology CDS 5703 6548 . + 0 ID=cds-WP_048023874.1;Parent=gene-LDO49_RS19345;Dbxref=GenBank:WP_048023874.1;Name=WP_048023874.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407079.1;locus_tag=LDO49_RS19345;product=tetratricopeptide repeat protein;protein_id=WP_048023874.1;transl_table=11 NZ_CAJZAV010000183.1 RefSeq gene 6748 7299 . + . ID=gene-LDO49_RS19350;Name=LDO49_RS19350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19350;old_locus_tag=BCEP4_2630007 NZ_CAJZAV010000183.1 Protein Homology CDS 6748 7299 . + 0 ID=cds-WP_048023872.1;Parent=gene-LDO49_RS19350;Dbxref=GenBank:WP_048023872.1;Name=WP_048023872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353347.1;locus_tag=LDO49_RS19350;product=hypothetical protein;protein_id=WP_048023872.1;transl_table=11 NZ_CAJZAV010000183.1 RefSeq pseudogene 7646 7993 . + . ID=gene-LDO49_RS38215;Name=LDO49_RS38215;end_range=7993,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38215;partial=true;pseudo=true NZ_CAJZAV010000183.1 Protein Homology CDS 7646 7993 . + 0 ID=cds-LDO49_RS38215;Parent=gene-LDO49_RS38215;Note=catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=7993,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011325102.1;locus_tag=LDO49_RS38215;partial=true;product=biotin--[acetyl-CoA-carboxylase] ligase;pseudo=true;transl_table=11 NZ_CAJZAV010000183.1 RefSeq pseudogene 8004 8253 . + . ID=gene-LDO49_RS38220;Name=LDO49_RS38220;end_range=8253,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38220;partial=true;pseudo=true;start_range=.,8004 NZ_CAJZAV010000183.1 Protein Homology CDS 8004 8253 . + 1 ID=cds-LDO49_RS38220;Parent=gene-LDO49_RS38220;Note=catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=8253,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004550941.1;locus_tag=LDO49_RS38220;partial=true;product=biotin--[acetyl-CoA-carboxylase] ligase;pseudo=true;start_range=.,8004;transl_table=11 ##sequence-region NZ_CAJZAV010000184.1 1 4632 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000184.1 RefSeq region 1 4632 . + . ID=NZ_CAJZAV010000184.1:1..4632;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_264 NZ_CAJZAV010000184.1 RefSeq pseudogene 1 163 . + . ID=gene-LDO49_RS37420;Name=LDO49_RS37420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37420;old_locus_tag=BCEP4_2640001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000184.1 Protein Homology CDS 1 163 . + 1 ID=cds-LDO49_RS37420;Parent=gene-LDO49_RS37420;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337011.1;locus_tag=LDO49_RS37420;partial=true;product=PLP-dependent decarboxylase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000184.1 RefSeq gene 299 1760 . + . ID=gene-LDO49_RS19360;Name=LDO49_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19360;old_locus_tag=BCEP4_2640003;partial=true;start_range=.,299 NZ_CAJZAV010000184.1 Protein Homology CDS 299 1760 . + 1 ID=cds-WP_443797984.1;Parent=gene-LDO49_RS19360;Dbxref=GenBank:WP_443797984.1;Name=WP_443797984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498006.1;locus_tag=LDO49_RS19360;partial=true;product=acyl-CoA ligase (AMP-forming)%2C exosortase A system-associated;protein_id=WP_443797984.1;start_range=.,299;transl_table=11 NZ_CAJZAV010000184.1 RefSeq gene 1757 2848 . + . ID=gene-LDO49_RS19365;Name=LDO49_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19365;old_locus_tag=BCEP4_2640004 NZ_CAJZAV010000184.1 Protein Homology CDS 1757 2848 . + 0 ID=cds-WP_059554387.1;Parent=gene-LDO49_RS19365;Dbxref=GenBank:WP_059554387.1;Name=WP_059554387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549199.1;locus_tag=LDO49_RS19365;product=hypothetical protein;protein_id=WP_059554387.1;transl_table=11 NZ_CAJZAV010000184.1 RefSeq gene 2845 4356 . + . ID=gene-LDO49_RS19370;Name=LDO49_RS19370;end_range=4356,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19370;old_locus_tag=BCEP4_2640005;partial=true NZ_CAJZAV010000184.1 Protein Homology CDS 2845 4356 . + 0 ID=cds-WP_443797985.1;Parent=gene-LDO49_RS19370;Dbxref=GenBank:WP_443797985.1;Name=WP_443797985.1;Ontology_term=GO:0016627;end_range=4356,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549200.1;locus_tag=LDO49_RS19370;partial=true;product=acyl-CoA dehydrogenase family protein;protein_id=WP_443797985.1;transl_table=11 NZ_CAJZAV010000184.1 RefSeq gene 4367 4632 . + . ID=gene-LDO49_RS38225;Name=LDO49_RS38225;end_range=4632,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38225;partial=true;start_range=.,4367 NZ_CAJZAV010000184.1 Protein Homology CDS 4367 4632 . + 0 ID=cds-WP_443797986.1;Parent=gene-LDO49_RS38225;Dbxref=GenBank:WP_443797986.1;Name=WP_443797986.1;Ontology_term=GO:0006631;end_range=4632,.;gbkey=CDS;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549200.1;locus_tag=LDO49_RS38225;partial=true;product=acyl-CoA dehydrogenase C-terminal domain-containing protein;protein_id=WP_443797986.1;start_range=.,4367;transl_table=11 ##sequence-region NZ_CAJZAV010000185.1 1 2895 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000185.1 RefSeq region 1 2895 . + . ID=NZ_CAJZAV010000185.1:1..2895;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_265 NZ_CAJZAV010000185.1 RefSeq gene 1 422 . + . ID=gene-LDO49_RS19375;Name=LDO49_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19375;old_locus_tag=BCEP4_2650001;partial=true;start_range=.,1 NZ_CAJZAV010000185.1 Protein Homology CDS 1 422 . + 2 ID=cds-WP_224052209.1;Parent=gene-LDO49_RS19375;Dbxref=GenBank:WP_224052209.1;Name=WP_224052209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492534.1;locus_tag=LDO49_RS19375;partial=true;product=YbfB/YjiJ family MFS transporter;protein_id=WP_224052209.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000185.1 RefSeq gene 677 2464 . + . ID=gene-LDO49_RS19380;Name=LDO49_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19380;old_locus_tag=BCEP4_2650002 NZ_CAJZAV010000185.1 Protein Homology CDS 677 2464 . + 0 ID=cds-WP_308043937.1;Parent=gene-LDO49_RS19380;Dbxref=GenBank:WP_308043937.1;Name=WP_308043937.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332504.1;locus_tag=LDO49_RS19380;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_308043937.1;transl_table=11 NZ_CAJZAV010000185.1 RefSeq gene 2529 2895 . + . ID=gene-LDO49_RS19385;Name=LDO49_RS19385;end_range=2895,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19385;partial=true NZ_CAJZAV010000185.1 Protein Homology CDS 2529 2895 . + 0 ID=cds-WP_290369868.1;Parent=gene-LDO49_RS19385;Dbxref=GenBank:WP_290369868.1;Name=WP_290369868.1;end_range=2895,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365193.1;locus_tag=LDO49_RS19385;partial=true;product=ESPR-type extended signal peptide-containing protein;protein_id=WP_290369868.1;transl_table=11 ##sequence-region NZ_CAJZAV010000186.1 1 6445 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000186.1 RefSeq region 1 6445 . + . ID=NZ_CAJZAV010000186.1:1..6445;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_266 NZ_CAJZAV010000186.1 RefSeq pseudogene 115 267 . + . ID=gene-LDO49_RS19390;Name=LDO49_RS19390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS19390;partial=true;pseudo=true;start_range=.,115 NZ_CAJZAV010000186.1 Protein Homology CDS 115 267 . + 0 ID=cds-LDO49_RS19390;Parent=gene-LDO49_RS19390;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_097189785.1;locus_tag=LDO49_RS19390;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,115;transl_table=11 NZ_CAJZAV010000186.1 RefSeq pseudogene 314 583 . + . ID=gene-LDO49_RS19395;Name=LDO49_RS19395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS19395;old_locus_tag=BCEP4_2660001;partial=true;pseudo=true;start_range=.,314 NZ_CAJZAV010000186.1 Protein Homology CDS 314 583 . + 0 ID=cds-LDO49_RS19395;Parent=gene-LDO49_RS19395;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218041.1;locus_tag=LDO49_RS19395;partial=true;product=transposase;pseudo=true;start_range=.,314;transl_table=11 NZ_CAJZAV010000186.1 RefSeq pseudogene 629 778 . - . ID=gene-LDO49_RS37570;Name=LDO49_RS37570;end_range=778,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37570;partial=true;pseudo=true;start_range=.,629 NZ_CAJZAV010000186.1 Protein Homology CDS 629 778 . - 0 ID=cds-LDO49_RS37570;Parent=gene-LDO49_RS37570;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=778,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732717.1;locus_tag=LDO49_RS37570;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,629;transl_table=11 NZ_CAJZAV010000186.1 RefSeq gene 1246 1902 . + . ID=gene-LDO49_RS19405;Name=LDO49_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19405;old_locus_tag=BCEP4_2660003 NZ_CAJZAV010000186.1 Protein Homology CDS 1246 1902 . + 0 ID=cds-WP_224052213.1;Parent=gene-LDO49_RS19405;Dbxref=GenBank:WP_224052213.1;Name=WP_224052213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014972992.1;locus_tag=LDO49_RS19405;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_224052213.1;transl_table=11 NZ_CAJZAV010000186.1 RefSeq gene 2095 2538 . + . ID=gene-LDO49_RS19410;Name=LDO49_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19410 NZ_CAJZAV010000186.1 Protein Homology CDS 2095 2538 . + 0 ID=cds-WP_185633989.1;Parent=gene-LDO49_RS19410;Dbxref=GenBank:WP_185633989.1;Name=WP_185633989.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008161937.1;locus_tag=LDO49_RS19410;product=C40 family peptidase;protein_id=WP_185633989.1;transl_table=11 NZ_CAJZAV010000186.1 RefSeq pseudogene 2844 3228 . + . ID=gene-LDO49_RS19415;Name=LDO49_RS19415;end_range=3228,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS19415;old_locus_tag=BCEP4_2660005;partial=true;pseudo=true;start_range=.,2844 NZ_CAJZAV010000186.1 Protein Homology CDS 2844 3228 . + 0 ID=cds-LDO49_RS19415;Parent=gene-LDO49_RS19415;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006508,GO:0004185;end_range=3228,.;gbkey=CDS;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554578.1;locus_tag=LDO49_RS19415;partial=true;product=D-alanyl-D-alanine carboxypeptidase;pseudo=true;start_range=.,2844;transl_table=11 NZ_CAJZAV010000186.1 RefSeq gene 3689 4006 . + . ID=gene-LDO49_RS19420;Name=LDO49_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19420 NZ_CAJZAV010000186.1 Protein Homology CDS 3689 4006 . + 0 ID=cds-WP_124476039.1;Parent=gene-LDO49_RS19420;Dbxref=GenBank:WP_124476039.1;Name=WP_124476039.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012398.6;locus_tag=LDO49_RS19420;product=aldehyde dehydrogenase family protein;protein_id=WP_124476039.1;transl_table=11 NZ_CAJZAV010000186.1 RefSeq gene 4038 4367 . + . ID=gene-LDO49_RS19425;Name=LDO49_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19425;old_locus_tag=BCEP4_2660008 NZ_CAJZAV010000186.1 GeneMarkS-2+ CDS 4038 4367 . + 0 ID=cds-WP_124476038.1;Parent=gene-LDO49_RS19425;Dbxref=GenBank:WP_124476038.1;Name=WP_124476038.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS19425;product=hypothetical protein;protein_id=WP_124476038.1;transl_table=11 NZ_CAJZAV010000186.1 RefSeq pseudogene 4410 5198 . + . ID=gene-LDO49_RS19430;Name=LDO49_RS19430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS19430;old_locus_tag=BCEP4_2660009;partial=true;pseudo=true;start_range=.,4410 NZ_CAJZAV010000186.1 Protein Homology CDS 4410 5198 . + 0 ID=cds-LDO49_RS19430;Parent=gene-LDO49_RS19430;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612266.1;locus_tag=LDO49_RS19430;partial=true;product=IS3-like element ISBcen15 family transposase;pseudo=true;start_range=.,4410;transl_table=11 NZ_CAJZAV010000186.1 RefSeq gene 5276 5548 . + . ID=gene-LDO49_RS19435;Name=LDO49_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19435;old_locus_tag=BCEP4_2660010 NZ_CAJZAV010000186.1 GeneMarkS-2+ CDS 5276 5548 . + 0 ID=cds-WP_124476037.1;Parent=gene-LDO49_RS19435;Dbxref=GenBank:WP_124476037.1;Name=WP_124476037.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS19435;product=hypothetical protein;protein_id=WP_124476037.1;transl_table=11 NZ_CAJZAV010000186.1 RefSeq gene 5898 6445 . + . ID=gene-LDO49_RS19440;Name=LDO49_RS19440;end_range=6445,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19440;partial=true NZ_CAJZAV010000186.1 Protein Homology CDS 5898 6445 . + 0 ID=cds-WP_224052215.1;Parent=gene-LDO49_RS19440;Dbxref=GenBank:WP_224052215.1;Name=WP_224052215.1;Ontology_term=GO:0004089,GO:0008270;end_range=6445,.;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415554.1;locus_tag=LDO49_RS19440;partial=true;product=carbonic anhydrase;protein_id=WP_224052215.1;transl_table=11 ##sequence-region NZ_CAJZAV010000187.1 1 814 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000187.1 RefSeq region 1 814 . + . ID=NZ_CAJZAV010000187.1:1..814;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_267 NZ_CAJZAV010000187.1 RefSeq gene 1 159 . - . ID=gene-LDO49_RS38230;Name=LDO49_RS38230;end_range=159,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38230;partial=true;start_range=.,1 NZ_CAJZAV010000187.1 Protein Homology CDS 1 159 . - 2 ID=cds-WP_443797987.1;Parent=gene-LDO49_RS38230;Dbxref=GenBank:WP_443797987.1;Name=WP_443797987.1;end_range=159,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478122.1;locus_tag=LDO49_RS38230;partial=true;product=alpha/beta fold hydrolase;protein_id=WP_443797987.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000187.1 RefSeq gene 246 659 . - . ID=gene-LDO49_RS19445;Name=LDO49_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19445;old_locus_tag=BCEP4_2670002 NZ_CAJZAV010000187.1 Protein Homology CDS 246 659 . - 0 ID=cds-WP_048025368.1;Parent=gene-LDO49_RS19445;Dbxref=GenBank:WP_048025368.1;Name=WP_048025368.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328997.1;locus_tag=LDO49_RS19445;product=helix-turn-helix domain-containing protein;protein_id=WP_048025368.1;transl_table=11 ##sequence-region NZ_CAJZAV010000188.1 1 2975 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000188.1 RefSeq region 1 2975 . + . ID=NZ_CAJZAV010000188.1:1..2975;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_268 NZ_CAJZAV010000188.1 RefSeq gene 1 603 . + . ID=gene-LDO49_RS19450;Name=LDO49_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19450;old_locus_tag=BCEP4_2680001;partial=true;start_range=.,1 NZ_CAJZAV010000188.1 Protein Homology CDS 1 603 . + 0 ID=cds-WP_224052217.1;Parent=gene-LDO49_RS19450;Dbxref=GenBank:WP_224052217.1;Name=WP_224052217.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498001.1;locus_tag=LDO49_RS19450;partial=true;product=TauD/TfdA family dioxygenase;protein_id=WP_224052217.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000188.1 RefSeq gene 617 1630 . + . ID=gene-LDO49_RS19455;Name=LDO49_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19455;old_locus_tag=BCEP4_2680002 NZ_CAJZAV010000188.1 Protein Homology CDS 617 1630 . + 0 ID=cds-WP_060130344.1;Parent=gene-LDO49_RS19455;Dbxref=GenBank:WP_060130344.1;Name=WP_060130344.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498000.1;locus_tag=LDO49_RS19455;product=ATP-binding cassette domain-containing protein;protein_id=WP_060130344.1;transl_table=11 NZ_CAJZAV010000188.1 RefSeq gene 1623 2702 . + . ID=gene-LDO49_RS19460;Name=LDO49_RS19460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19460;old_locus_tag=BCEP4_2680003 NZ_CAJZAV010000188.1 Protein Homology CDS 1623 2702 . + 0 ID=cds-WP_027792024.1;Parent=gene-LDO49_RS19460;Dbxref=GenBank:WP_027792024.1;Name=WP_027792024.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350117.1;locus_tag=LDO49_RS19460;product=ABC transporter permease;protein_id=WP_027792024.1;transl_table=11 NZ_CAJZAV010000188.1 RefSeq pseudogene 2755 2975 . + . ID=gene-LDO49_RS19465;Name=LDO49_RS19465;end_range=2975,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS19465;partial=true;pseudo=true NZ_CAJZAV010000188.1 Protein Homology CDS 2755 2975 . + 0 ID=cds-LDO49_RS19465;Parent=gene-LDO49_RS19465;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2975,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497998.1;locus_tag=LDO49_RS19465;partial=true;product=permease;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000189.1 1 5082 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000189.1 RefSeq region 1 5082 . + . ID=NZ_CAJZAV010000189.1:1..5082;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_269 NZ_CAJZAV010000189.1 RefSeq gene 1 1093 . - . ID=gene-LDO49_RS19470;Name=LDO49_RS19470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19470;partial=true;start_range=.,1 NZ_CAJZAV010000189.1 Protein Homology CDS 1 1093 . - 0 ID=cds-WP_224052219.1;Parent=gene-LDO49_RS19470;Dbxref=GenBank:WP_224052219.1;Name=WP_224052219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012761120.1;locus_tag=LDO49_RS19470;partial=true;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;protein_id=WP_224052219.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000189.1 RefSeq gene 1157 2050 . - . ID=gene-LDO49_RS19475;Name=LDO49_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19475;old_locus_tag=BCEP4_2690002 NZ_CAJZAV010000189.1 Protein Homology CDS 1157 2050 . - 0 ID=cds-WP_060069850.1;Parent=gene-LDO49_RS19475;Dbxref=GenBank:WP_060069850.1;Name=WP_060069850.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761631.1;locus_tag=LDO49_RS19475;product=polysaccharide deacetylase family protein;protein_id=WP_060069850.1;transl_table=11 NZ_CAJZAV010000189.1 RefSeq gene 2047 4515 . - . ID=gene-LDO49_RS19480;Name=LDO49_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19480;old_locus_tag=BCEP4_2690003 NZ_CAJZAV010000189.1 Protein Homology CDS 2047 4515 . - 0 ID=cds-WP_060069848.1;Parent=gene-LDO49_RS19480;Dbxref=GenBank:WP_060069848.1;Name=WP_060069848.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364717.1;locus_tag=LDO49_RS19480;product=MMPL family transporter;protein_id=WP_060069848.1;transl_table=11 NZ_CAJZAV010000189.1 RefSeq gene 4515 5082 . - . ID=gene-LDO49_RS19485;Name=LDO49_RS19485;end_range=5082,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19485;old_locus_tag=BCEP4_2690004;partial=true NZ_CAJZAV010000189.1 Protein Homology CDS 4515 5082 . - 1 ID=cds-WP_224052221.1;Parent=gene-LDO49_RS19485;Dbxref=GenBank:WP_224052221.1;Name=WP_224052221.1;Ontology_term=GO:0042953,GO:0044874,GO:0009279;end_range=5082,.;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=lipoprotein transport|0042953||IEA,lipoprotein localization to outer membrane|0044874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490865.1;locus_tag=LDO49_RS19485;partial=true;product=outer membrane lipoprotein carrier protein LolA;protein_id=WP_224052221.1;transl_table=11 ##sequence-region NZ_CAJZAV010000190.1 1 34323 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000190.1 RefSeq region 1 34323 . + . ID=NZ_CAJZAV010000190.1:1..34323;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_27 NZ_CAJZAV010000190.1 RefSeq pseudogene 1 162 . - . ID=gene-LDO49_RS19490;Name=LDO49_RS19490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS19490;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000190.1 Protein Homology CDS 1 162 . - 0 ID=cds-LDO49_RS19490;Parent=gene-LDO49_RS19490;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330921.1;locus_tag=LDO49_RS19490;partial=true;product=phosphorylase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 187 2160 . - . ID=gene-LDO49_RS19495;Name=shc;gbkey=Gene;gene=shc;gene_biotype=protein_coding;locus_tag=LDO49_RS19495;old_locus_tag=BCEP4_270002 NZ_CAJZAV010000190.1 Protein Homology CDS 187 2160 . - 0 ID=cds-WP_021161397.1;Parent=gene-LDO49_RS19495;Dbxref=GenBank:WP_021161397.1;Name=WP_021161397.1;Ontology_term=GO:0019746,GO:0016866,GO:0051007;gbkey=CDS;gene=shc;go_function=intramolecular transferase activity|0016866||IEA,squalene-hopene cyclase activity|0051007||IEA;go_process=hopanoid biosynthetic process|0019746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548765.1;locus_tag=LDO49_RS19495;product=squalene--hopene cyclase;protein_id=WP_021161397.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 2176 3429 . - . ID=gene-LDO49_RS19500;Name=hpnE;gbkey=Gene;gene=hpnE;gene_biotype=protein_coding;locus_tag=LDO49_RS19500;old_locus_tag=BCEP4_270003 NZ_CAJZAV010000190.1 Protein Homology CDS 2176 3429 . - 0 ID=cds-WP_042976298.1;Parent=gene-LDO49_RS19500;Dbxref=GenBank:WP_042976298.1;Name=WP_042976298.1;Ontology_term=GO:0016491;gbkey=CDS;gene=hpnE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493654.1;locus_tag=LDO49_RS19500;product=hydroxysqualene dehydroxylase HpnE;protein_id=WP_042976298.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 3443 4291 . - . ID=gene-LDO49_RS19505;Name=hpnD;gbkey=Gene;gene=hpnD;gene_biotype=protein_coding;locus_tag=LDO49_RS19505;old_locus_tag=BCEP4_270004 NZ_CAJZAV010000190.1 Protein Homology CDS 3443 4291 . - 0 ID=cds-WP_021161395.1;Parent=gene-LDO49_RS19505;Dbxref=GenBank:WP_021161395.1;Name=WP_021161395.1;Ontology_term=GO:0016117,GO:0046905;gbkey=CDS;gene=hpnD;go_function=15-cis-phytoene synthase activity|0046905||IEA;go_process=carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404656.1;locus_tag=LDO49_RS19505;product=presqualene diphosphate synthase HpnD;protein_id=WP_021161395.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 4551 4883 . - . ID=gene-LDO49_RS19510;Name=LDO49_RS19510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19510;old_locus_tag=BCEP4_270006 NZ_CAJZAV010000190.1 Protein Homology CDS 4551 4883 . - 0 ID=cds-WP_060074538.1;Parent=gene-LDO49_RS19510;Dbxref=GenBank:WP_060074538.1;Name=WP_060074538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766711.1;locus_tag=LDO49_RS19510;product=hypothetical protein;protein_id=WP_060074538.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 5058 5942 . + . ID=gene-LDO49_RS19515;Name=LDO49_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19515;old_locus_tag=BCEP4_270005 NZ_CAJZAV010000190.1 Protein Homology CDS 5058 5942 . + 0 ID=cds-WP_059857192.1;Parent=gene-LDO49_RS19515;Dbxref=GenBank:WP_059857192.1;Name=WP_059857192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766712.1;locus_tag=LDO49_RS19515;product=alpha/beta fold hydrolase;protein_id=WP_059857192.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 5999 6937 . - . ID=gene-LDO49_RS19520;Name=LDO49_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19520;old_locus_tag=BCEP4_270007 NZ_CAJZAV010000190.1 Protein Homology CDS 5999 6937 . - 0 ID=cds-WP_059586265.1;Parent=gene-LDO49_RS19520;Dbxref=GenBank:WP_059586265.1;Name=WP_059586265.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397541.1;locus_tag=LDO49_RS19520;product=GGDEF domain-containing protein;protein_id=WP_059586265.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 6934 7560 . - . ID=gene-LDO49_RS19525;Name=LDO49_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19525;old_locus_tag=BCEP4_270008 NZ_CAJZAV010000190.1 Protein Homology CDS 6934 7560 . - 0 ID=cds-WP_021161391.1;Parent=gene-LDO49_RS19525;Dbxref=GenBank:WP_021161391.1;Name=WP_021161391.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530631.1;locus_tag=LDO49_RS19525;product=chemotaxis protein CheC;protein_id=WP_021161391.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 7553 7921 . - . ID=gene-LDO49_RS19530;Name=LDO49_RS19530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19530;old_locus_tag=BCEP4_270009 NZ_CAJZAV010000190.1 Protein Homology CDS 7553 7921 . - 0 ID=cds-WP_021161390.1;Parent=gene-LDO49_RS19530;Dbxref=GenBank:WP_021161390.1;Name=WP_021161390.1;Ontology_term=GO:0000160,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766715.1;locus_tag=LDO49_RS19530;product=response regulator;protein_id=WP_021161390.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 7991 8284 . + . ID=gene-LDO49_RS19535;Name=LDO49_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19535 NZ_CAJZAV010000190.1 GeneMarkS-2+ CDS 7991 8284 . + 0 ID=cds-WP_021161389.1;Parent=gene-LDO49_RS19535;Dbxref=GenBank:WP_021161389.1;Name=WP_021161389.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS19535;product=hypothetical protein;protein_id=WP_021161389.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 8403 10667 . + . ID=gene-LDO49_RS19540;Name=LDO49_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19540;old_locus_tag=BCEP4_270010 NZ_CAJZAV010000190.1 Protein Homology CDS 8403 10667 . + 0 ID=cds-WP_042976295.1;Parent=gene-LDO49_RS19540;Dbxref=GenBank:WP_042976295.1;Name=WP_042976295.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900711.1;locus_tag=LDO49_RS19540;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_042976295.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 10720 11274 . - . ID=gene-LDO49_RS19545;Name=LDO49_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19545;old_locus_tag=BCEP4_270011 NZ_CAJZAV010000190.1 Protein Homology CDS 10720 11274 . - 0 ID=cds-WP_011353625.1;Parent=gene-LDO49_RS19545;Dbxref=GenBank:WP_011353625.1;Name=WP_011353625.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480199.1;locus_tag=LDO49_RS19545;product=NADPH-dependent FMN reductase;protein_id=WP_011353625.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 11640 12239 . + . ID=gene-LDO49_RS19550;Name=LDO49_RS19550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19550;old_locus_tag=BCEP4_270012 NZ_CAJZAV010000190.1 Protein Homology CDS 11640 12239 . + 0 ID=cds-WP_042976293.1;Parent=gene-LDO49_RS19550;Dbxref=GenBank:WP_042976293.1;Name=WP_042976293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353624.1;locus_tag=LDO49_RS19550;product=RNA polymerase factor sigma-70;protein_id=WP_042976293.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 12217 12432 . + . ID=gene-LDO49_RS19555;Name=LDO49_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19555;old_locus_tag=BCEP4_270013 NZ_CAJZAV010000190.1 Protein Homology CDS 12217 12432 . + 0 ID=cds-WP_060074539.1;Parent=gene-LDO49_RS19555;Dbxref=GenBank:WP_060074539.1;Name=WP_060074539.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367161.1;locus_tag=LDO49_RS19555;product=zf-HC2 domain-containing protein;protein_id=WP_060074539.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 12555 12911 . - . ID=gene-LDO49_RS19560;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=LDO49_RS19560;old_locus_tag=BCEP4_270014 NZ_CAJZAV010000190.1 Protein Homology CDS 12555 12911 . - 0 ID=cds-WP_059487735.1;Parent=gene-LDO49_RS19560;Dbxref=GenBank:WP_059487735.1;Name=WP_059487735.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496228.1;locus_tag=LDO49_RS19560;product=arsenate reductase (glutaredoxin);protein_id=WP_059487735.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 13935 14597 . + . ID=gene-LDO49_RS19565;Name=parA;gbkey=Gene;gene=parA;gene_biotype=protein_coding;locus_tag=LDO49_RS19565;old_locus_tag=BCEP4_270017 NZ_CAJZAV010000190.1 Protein Homology CDS 13935 14597 . + 0 ID=cds-WP_021163725.1;Parent=gene-LDO49_RS19565;Dbxref=GenBank:WP_021163725.1;Name=WP_021163725.1;gbkey=CDS;gene=parA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900706.1;locus_tag=LDO49_RS19565;product=ParA family partition ATPase;protein_id=WP_021163725.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 14621 15682 . + . ID=gene-LDO49_RS19570;Name=LDO49_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19570;old_locus_tag=BCEP4_270018 NZ_CAJZAV010000190.1 Protein Homology CDS 14621 15682 . + 0 ID=cds-WP_060073297.1;Parent=gene-LDO49_RS19570;Dbxref=GenBank:WP_060073297.1;Name=WP_060073297.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480194.1;locus_tag=LDO49_RS19570;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_060073297.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 15763 17130 . - . ID=gene-LDO49_RS19575;Name=LDO49_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19575;old_locus_tag=BCEP4_270019 NZ_CAJZAV010000190.1 Protein Homology CDS 15763 17130 . - 0 ID=cds-WP_021163723.1;Parent=gene-LDO49_RS19575;Dbxref=GenBank:WP_021163723.1;Name=WP_021163723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353619.1;locus_tag=LDO49_RS19575;product=replication initiation protein;protein_id=WP_021163723.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 18951 20132 . + . ID=gene-LDO49_RS19580;Name=LDO49_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19580;old_locus_tag=BCEP4_270021 NZ_CAJZAV010000190.1 Protein Homology CDS 18951 20132 . + 0 ID=cds-WP_060073295.1;Parent=gene-LDO49_RS19580;Dbxref=GenBank:WP_060073295.1;Name=WP_060073295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485168.1;locus_tag=LDO49_RS19580;product=DNA-binding protein;protein_id=WP_060073295.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 20269 21294 . - . ID=gene-LDO49_RS19585;Name=LDO49_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19585;old_locus_tag=BCEP4_270022 NZ_CAJZAV010000190.1 Protein Homology CDS 20269 21294 . - 0 ID=cds-WP_060073293.1;Parent=gene-LDO49_RS19585;Dbxref=GenBank:WP_060073293.1;Name=WP_060073293.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339070.1;locus_tag=LDO49_RS19585;product=tyrosine-type recombinase/integrase;protein_id=WP_060073293.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 21404 21781 . - . ID=gene-LDO49_RS19590;Name=LDO49_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19590;old_locus_tag=BCEP4_270023 NZ_CAJZAV010000190.1 Protein Homology CDS 21404 21781 . - 0 ID=cds-WP_021163720.1;Parent=gene-LDO49_RS19590;Dbxref=GenBank:WP_021163720.1;Name=WP_021163720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548749.1;locus_tag=LDO49_RS19590;product=DUF2471 family protein;protein_id=WP_021163720.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 21922 22533 . - . ID=gene-LDO49_RS19595;Name=LDO49_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19595;old_locus_tag=BCEP4_270024 NZ_CAJZAV010000190.1 Protein Homology CDS 21922 22533 . - 0 ID=cds-WP_021163719.1;Parent=gene-LDO49_RS19595;Dbxref=GenBank:WP_021163719.1;Name=WP_021163719.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009967364.1;locus_tag=LDO49_RS19595;product=helix-turn-helix domain-containing protein;protein_id=WP_021163719.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 22695 23894 . + . ID=gene-LDO49_RS19600;Name=LDO49_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19600;old_locus_tag=BCEP4_270025 NZ_CAJZAV010000190.1 Protein Homology CDS 22695 23894 . + 0 ID=cds-WP_021163718.1;Parent=gene-LDO49_RS19600;Dbxref=GenBank:WP_021163718.1;Name=WP_021163718.1;Ontology_term=GO:0009058,GO:0008890,GO:0030170;gbkey=CDS;go_function=glycine C-acetyltransferase activity|0008890||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411924.1;locus_tag=LDO49_RS19600;product=glycine C-acetyltransferase;protein_id=WP_021163718.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 23908 24936 . + . ID=gene-LDO49_RS19605;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=LDO49_RS19605;old_locus_tag=BCEP4_270026 NZ_CAJZAV010000190.1 Protein Homology CDS 23908 24936 . + 0 ID=cds-WP_047902093.1;Parent=gene-LDO49_RS19605;Dbxref=GenBank:WP_047902093.1;Name=WP_047902093.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356765.1;locus_tag=LDO49_RS19605;product=L-threonine 3-dehydrogenase;protein_id=WP_047902093.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 25332 25748 . - . ID=gene-LDO49_RS19610;Name=LDO49_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19610;old_locus_tag=BCEP4_270027 NZ_CAJZAV010000190.1 Protein Homology CDS 25332 25748 . - 0 ID=cds-WP_021163716.1;Parent=gene-LDO49_RS19610;Dbxref=GenBank:WP_021163716.1;Name=WP_021163716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493628.1;locus_tag=LDO49_RS19610;product=hypothetical protein;protein_id=WP_021163716.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 25745 26383 . - . ID=gene-LDO49_RS19615;Name=LDO49_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19615;old_locus_tag=BCEP4_270028 NZ_CAJZAV010000190.1 Protein Homology CDS 25745 26383 . - 0 ID=cds-WP_059708687.1;Parent=gene-LDO49_RS19615;Dbxref=GenBank:WP_059708687.1;Name=WP_059708687.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485174.1;locus_tag=LDO49_RS19615;product=GNAT family N-acetyltransferase;protein_id=WP_059708687.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 26566 27171 . + . ID=gene-LDO49_RS19620;Name=LDO49_RS19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19620;old_locus_tag=BCEP4_270029 NZ_CAJZAV010000190.1 Protein Homology CDS 26566 27171 . + 0 ID=cds-WP_021163714.1;Parent=gene-LDO49_RS19620;Dbxref=GenBank:WP_021163714.1;Name=WP_021163714.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548745.1;locus_tag=LDO49_RS19620;product=TetR/AcrR family transcriptional regulator;protein_id=WP_021163714.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 27235 27714 . + . ID=gene-LDO49_RS19625;Name=LDO49_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19625;old_locus_tag=BCEP4_270030 NZ_CAJZAV010000190.1 Protein Homology CDS 27235 27714 . + 0 ID=cds-WP_048021168.1;Parent=gene-LDO49_RS19625;Dbxref=GenBank:WP_048021168.1;Name=WP_048021168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894511.1;locus_tag=LDO49_RS19625;product=nuclear transport factor 2 family protein;protein_id=WP_048021168.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 28212 29297 . - . ID=gene-LDO49_RS19630;Name=LDO49_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19630;old_locus_tag=BCEP4_270032 NZ_CAJZAV010000190.1 Protein Homology CDS 28212 29297 . - 0 ID=cds-WP_060073291.1;Parent=gene-LDO49_RS19630;Dbxref=GenBank:WP_060073291.1;Name=WP_060073291.1;Ontology_term=GO:0046395,GO:0009027,GO:0051287;gbkey=CDS;go_function=tartrate dehydrogenase activity|0009027||IEA,NAD binding|0051287||IEA;go_process=carboxylic acid catabolic process|0046395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659912.1;locus_tag=LDO49_RS19630;product=tartrate dehydrogenase;protein_id=WP_060073291.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 29415 30338 . + . ID=gene-LDO49_RS19635;Name=LDO49_RS19635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19635;old_locus_tag=BCEP4_270031 NZ_CAJZAV010000190.1 Protein Homology CDS 29415 30338 . + 0 ID=cds-WP_059688150.1;Parent=gene-LDO49_RS19635;Dbxref=GenBank:WP_059688150.1;Name=WP_059688150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485150.1;locus_tag=LDO49_RS19635;product=LysR substrate-binding domain-containing protein;protein_id=WP_059688150.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 30497 31453 . - . ID=gene-LDO49_RS19640;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=LDO49_RS19640;old_locus_tag=BCEP4_270033 NZ_CAJZAV010000190.1 Protein Homology CDS 30497 31453 . - 0 ID=cds-WP_060073289.1;Parent=gene-LDO49_RS19640;Dbxref=GenBank:WP_060073289.1;Name=WP_060073289.1;Ontology_term=GO:0006526,GO:0003942,GO:0005737;gbkey=CDS;gene=argC;go_component=cytoplasm|0005737||IEA;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900691.1;locus_tag=LDO49_RS19640;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_060073289.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 31573 32457 . + . ID=gene-LDO49_RS19645;Name=LDO49_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19645;old_locus_tag=BCEP4_270034 NZ_CAJZAV010000190.1 Protein Homology CDS 31573 32457 . + 0 ID=cds-WP_021163709.1;Parent=gene-LDO49_RS19645;Dbxref=GenBank:WP_021163709.1;Name=WP_021163709.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548739.1;locus_tag=LDO49_RS19645;product=LysR family transcriptional regulator;protein_id=WP_021163709.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 32533 32997 . - . ID=gene-LDO49_RS19650;Name=LDO49_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19650;old_locus_tag=BCEP4_270035 NZ_CAJZAV010000190.1 Protein Homology CDS 32533 32997 . - 0 ID=cds-WP_060073287.1;Parent=gene-LDO49_RS19650;Dbxref=GenBank:WP_060073287.1;Name=WP_060073287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751648.1;locus_tag=LDO49_RS19650;product=hypothetical protein;protein_id=WP_060073287.1;transl_table=11 NZ_CAJZAV010000190.1 RefSeq gene 33058 34275 . - . ID=gene-LDO49_RS19655;Name=LDO49_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19655;old_locus_tag=BCEP4_270037 NZ_CAJZAV010000190.1 Protein Homology CDS 33058 34275 . - 0 ID=cds-WP_060073285.1;Parent=gene-LDO49_RS19655;Dbxref=GenBank:WP_060073285.1;Name=WP_060073285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194462.1;locus_tag=LDO49_RS19655;product=patatin-like phospholipase family protein;protein_id=WP_060073285.1;transl_table=11 ##sequence-region NZ_CAJZAV010000191.1 1 1200 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000191.1 RefSeq region 1 1200 . + . ID=NZ_CAJZAV010000191.1:1..1200;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_270 NZ_CAJZAV010000191.1 RefSeq pseudogene 29 1139 . - . ID=gene-LDO49_RS19660;Name=LDO49_RS19660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS19660;pseudo=true NZ_CAJZAV010000191.1 Protein Homology CDS 29 1139 . - 0 ID=cds-LDO49_RS19660;Parent=gene-LDO49_RS19660;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611495.1;locus_tag=LDO49_RS19660;product=IS3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000192.1 1 1975 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000192.1 RefSeq region 1 1975 . + . ID=NZ_CAJZAV010000192.1:1..1975;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_271 NZ_CAJZAV010000192.1 RefSeq gene 683 943 . + . ID=gene-LDO49_RS19665;Name=LDO49_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19665;old_locus_tag=BCEP4_2710003 NZ_CAJZAV010000192.1 Protein Homology CDS 683 943 . + 0 ID=cds-WP_042975727.1;Parent=gene-LDO49_RS19665;Dbxref=GenBank:WP_042975727.1;Name=WP_042975727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016724058.1;locus_tag=LDO49_RS19665;product=phosphopantetheine-binding protein;protein_id=WP_042975727.1;transl_table=11 NZ_CAJZAV010000192.1 RefSeq gene 1054 1770 . + . ID=gene-LDO49_RS19670;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LDO49_RS19670;old_locus_tag=BCEP4_2710004 NZ_CAJZAV010000192.1 Protein Homology CDS 1054 1770 . + 0 ID=cds-WP_021160651.1;Parent=gene-LDO49_RS19670;Dbxref=GenBank:WP_021160651.1;Name=WP_021160651.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fabG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003269686.1;locus_tag=LDO49_RS19670;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_021160651.1;transl_table=11 ##sequence-region NZ_CAJZAV010000193.1 1 8630 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000193.1 RefSeq region 1 8630 . + . ID=NZ_CAJZAV010000193.1:1..8630;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_272 NZ_CAJZAV010000193.1 RefSeq gene 1 3256 . - . ID=gene-LDO49_RS19675;Name=LDO49_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19675;partial=true;start_range=.,1 NZ_CAJZAV010000193.1 Protein Homology CDS 1 3256 . - 0 ID=cds-WP_224052223.1;Parent=gene-LDO49_RS19675;Dbxref=GenBank:WP_224052223.1;Name=WP_224052223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213362.1;locus_tag=LDO49_RS19675;partial=true;product=non-ribosomal peptide synthetase;protein_id=WP_224052223.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000193.1 RefSeq gene 3266 8630 . - . ID=gene-LDO49_RS19680;Name=LDO49_RS19680;end_range=8630,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19680;old_locus_tag=BCEP4_2720002;partial=true NZ_CAJZAV010000193.1 Protein Homology CDS 3266 8630 . - 1 ID=cds-WP_224052224.1;Parent=gene-LDO49_RS19680;Dbxref=GenBank:WP_224052224.1;Name=WP_224052224.1;end_range=8630,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400101.1;locus_tag=LDO49_RS19680;partial=true;product=non-ribosomal peptide synthetase;protein_id=WP_224052224.1;transl_table=11 ##sequence-region NZ_CAJZAV010000194.1 1 1762 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000194.1 RefSeq region 1 1762 . + . ID=NZ_CAJZAV010000194.1:1..1762;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_273 NZ_CAJZAV010000194.1 RefSeq gene 1 198 . + . ID=gene-LDO49_RS19685;Name=LDO49_RS19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19685;old_locus_tag=BCEP4_2730001;partial=true;start_range=.,1 NZ_CAJZAV010000194.1 GeneMarkS-2+ CDS 1 198 . + 0 ID=cds-WP_224052225.1;Parent=gene-LDO49_RS19685;Dbxref=GenBank:WP_224052225.1;Name=WP_224052225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS19685;partial=true;product=hypothetical protein;protein_id=WP_224052225.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000194.1 RefSeq gene 645 1127 . - . ID=gene-LDO49_RS19690;Name=LDO49_RS19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19690;old_locus_tag=BCEP4_2730002 NZ_CAJZAV010000194.1 Protein Homology CDS 645 1127 . - 0 ID=cds-WP_021159229.1;Parent=gene-LDO49_RS19690;Dbxref=GenBank:WP_021159229.1;Name=WP_021159229.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010098798.1;locus_tag=LDO49_RS19690;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_021159229.1;transl_table=11 NZ_CAJZAV010000194.1 RefSeq pseudogene 1334 1528 . + . ID=gene-LDO49_RS38235;Name=LDO49_RS38235;end_range=1528,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38235;partial=true;pseudo=true NZ_CAJZAV010000194.1 Protein Homology CDS 1334 1528 . + 0 ID=cds-LDO49_RS38235;Parent=gene-LDO49_RS38235;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1528,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355316.1;locus_tag=LDO49_RS38235;partial=true;product=LysE family translocator;pseudo=true;transl_table=11 NZ_CAJZAV010000194.1 RefSeq pseudogene 1539 1762 . + . ID=gene-LDO49_RS38240;Name=LDO49_RS38240;end_range=1762,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38240;partial=true;pseudo=true;start_range=.,1539 NZ_CAJZAV010000194.1 Protein Homology CDS 1539 1762 . + 1 ID=cds-LDO49_RS38240;Parent=gene-LDO49_RS38240;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1762,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658731.1;locus_tag=LDO49_RS38240;partial=true;product=LysE family translocator;pseudo=true;start_range=.,1539;transl_table=11 ##sequence-region NZ_CAJZAV010000195.1 1 4085 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000195.1 RefSeq region 1 4085 . + . ID=NZ_CAJZAV010000195.1:1..4085;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_274 NZ_CAJZAV010000195.1 RefSeq pseudogene 108 192 . + . ID=gene-LDO49_RS38245;Name=LDO49_RS38245;end_range=192,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38245;old_locus_tag=BCEP4_2740001;partial=true;pseudo=true;start_range=.,108 NZ_CAJZAV010000195.1 Protein Homology CDS 108 192 . + 0 ID=cds-LDO49_RS38245;Parent=gene-LDO49_RS38245;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=192,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478256.1;locus_tag=LDO49_RS38245;partial=true;product=SulP family inorganic anion transporter;pseudo=true;start_range=.,108;transl_table=11 NZ_CAJZAV010000195.1 RefSeq gene 203 1687 . + . ID=gene-LDO49_RS19700;Name=LDO49_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19700;old_locus_tag=BCEP4_2740002;partial=true;start_range=.,203 NZ_CAJZAV010000195.1 Protein Homology CDS 203 1687 . + 0 ID=cds-WP_443797988.1;Parent=gene-LDO49_RS19700;Dbxref=GenBank:WP_443797988.1;Name=WP_443797988.1;Ontology_term=GO:0015103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic anion transmembrane transporter activity|0015103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010114577.1;locus_tag=LDO49_RS19700;partial=true;product=SulP family inorganic anion transporter;protein_id=WP_443797988.1;start_range=.,203;transl_table=11 NZ_CAJZAV010000195.1 RefSeq pseudogene 2187 2604 . + . ID=gene-LDO49_RS19705;Name=LDO49_RS19705;end_range=2604,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS19705;partial=true;pseudo=true NZ_CAJZAV010000195.1 Protein Homology CDS 2187 2604 . + 0 ID=cds-LDO49_RS19705;Parent=gene-LDO49_RS19705;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=2604,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611281.1;locus_tag=LDO49_RS19705;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CAJZAV010000195.1 RefSeq pseudogene 2619 2888 . + . ID=gene-LDO49_RS19710;Name=LDO49_RS19710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS19710;old_locus_tag=BCEP4_2740004;partial=true;pseudo=true;start_range=.,2619 NZ_CAJZAV010000195.1 Protein Homology CDS 2619 2888 . + 0 ID=cds-LDO49_RS19710;Parent=gene-LDO49_RS19710;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890252.1;locus_tag=LDO49_RS19710;partial=true;product=DNA adenine methylase;pseudo=true;start_range=.,2619;transl_table=11 NZ_CAJZAV010000195.1 RefSeq gene 2848 3255 . - . ID=gene-LDO49_RS19715;Name=LDO49_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19715;old_locus_tag=BCEP4_2740005 NZ_CAJZAV010000195.1 GeneMarkS-2+ CDS 2848 3255 . - 0 ID=cds-WP_124476036.1;Parent=gene-LDO49_RS19715;Dbxref=GenBank:WP_124476036.1;Name=WP_124476036.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS19715;product=hypothetical protein;protein_id=WP_124476036.1;transl_table=11 NZ_CAJZAV010000195.1 RefSeq gene 3429 4085 . - . ID=gene-LDO49_RS19720;Name=tnpC;end_range=4085,.;gbkey=Gene;gene=tnpC;gene_biotype=protein_coding;locus_tag=LDO49_RS19720;old_locus_tag=BCEP4_2740006;partial=true NZ_CAJZAV010000195.1 Protein Homology CDS 3429 4085 . - 0 ID=cds-WP_224052226.1;Parent=gene-LDO49_RS19720;Dbxref=GenBank:WP_224052226.1;Name=WP_224052226.1;Ontology_term=GO:0004803;end_range=4085,.;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012404184.1;locus_tag=LDO49_RS19720;partial=true;product=IS66 family transposase;protein_id=WP_224052226.1;transl_table=11 ##sequence-region NZ_CAJZAV010000196.1 1 3578 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000196.1 RefSeq region 1 3578 . + . ID=NZ_CAJZAV010000196.1:1..3578;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_275 NZ_CAJZAV010000196.1 RefSeq gene 92 673 . - . ID=gene-LDO49_RS19725;Name=LDO49_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19725 NZ_CAJZAV010000196.1 Protein Homology CDS 92 673 . - 0 ID=cds-WP_372585856.1;Parent=gene-LDO49_RS19725;Dbxref=GenBank:WP_372585856.1;Name=WP_372585856.1;Ontology_term=GO:0071555,GO:0008932;gbkey=CDS;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008349095.1;locus_tag=LDO49_RS19725;product=septal ring lytic transglycosylase RlpA family protein;protein_id=WP_372585856.1;transl_table=11 NZ_CAJZAV010000196.1 RefSeq pseudogene 759 1162 . + . ID=gene-LDO49_RS19730;Name=LDO49_RS19730;end_range=1162,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS19730;partial=true;pseudo=true;start_range=.,759 NZ_CAJZAV010000196.1 Protein Homology CDS 759 1162 . + 0 ID=cds-LDO49_RS19730;Parent=gene-LDO49_RS19730;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1162,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611314.1;locus_tag=LDO49_RS19730;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,759;transl_table=11 NZ_CAJZAV010000196.1 RefSeq gene 1124 1396 . - . ID=gene-LDO49_RS19735;Name=LDO49_RS19735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19735;old_locus_tag=BCEP4_2750001 NZ_CAJZAV010000196.1 GeneMarkS-2+ CDS 1124 1396 . - 0 ID=cds-WP_081067179.1;Parent=gene-LDO49_RS19735;Dbxref=GenBank:WP_081067179.1;Name=WP_081067179.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS19735;product=hypothetical protein;protein_id=WP_081067179.1;transl_table=11 NZ_CAJZAV010000196.1 RefSeq gene 1820 2233 . + . ID=gene-LDO49_RS19740;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=protein_coding;locus_tag=LDO49_RS19740;old_locus_tag=BCEP4_2750005 NZ_CAJZAV010000196.1 Protein Homology CDS 1820 2233 . + 0 ID=cds-WP_081067180.1;Parent=gene-LDO49_RS19740;Dbxref=GenBank:WP_081067180.1;Name=WP_081067180.1;gbkey=CDS;gene=tnpA;inference=COORDINATES: protein motif:HMM:NF047595.1;locus_tag=LDO49_RS19740;product=IS66-like element accessory protein TnpA;protein_id=WP_081067180.1;transl_table=11 NZ_CAJZAV010000196.1 RefSeq gene 2230 2577 . + . ID=gene-LDO49_RS19745;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=LDO49_RS19745;old_locus_tag=BCEP4_2750004 NZ_CAJZAV010000196.1 Protein Homology CDS 2230 2577 . + 0 ID=cds-WP_224052227.1;Parent=gene-LDO49_RS19745;Dbxref=GenBank:WP_224052227.1;Name=WP_224052227.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.6;locus_tag=LDO49_RS19745;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_224052227.1;transl_table=11 NZ_CAJZAV010000196.1 RefSeq pseudogene 2629 3492 . + . ID=gene-LDO49_RS19750;Name=tnpC;end_range=3492,.;gbkey=Gene;gene=tnpC;gene_biotype=pseudogene;locus_tag=LDO49_RS19750;old_locus_tag=BCEP4_2750006;partial=true;pseudo=true NZ_CAJZAV010000196.1 Protein Homology CDS 2629 3492 . + 0 ID=cds-LDO49_RS19750;Parent=gene-LDO49_RS19750;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=3492,.;gbkey=CDS;gene=tnpC;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482547.1;locus_tag=LDO49_RS19750;partial=true;product=IS66 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000197.1 1 4038 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000197.1 RefSeq region 1 4038 . + . ID=NZ_CAJZAV010000197.1:1..4038;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_276 NZ_CAJZAV010000197.1 RefSeq gene 320 958 . + . ID=gene-LDO49_RS19760;Name=LDO49_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19760;old_locus_tag=BCEP4_2760001 NZ_CAJZAV010000197.1 Protein Homology CDS 320 958 . + 0 ID=cds-WP_060073240.1;Parent=gene-LDO49_RS19760;Dbxref=GenBank:WP_060073240.1;Name=WP_060073240.1;Ontology_term=GO:0043934,GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;go_process=sporulation|0043934||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546936.1;locus_tag=LDO49_RS19760;product=FMN-binding negative transcriptional regulator;protein_id=WP_060073240.1;transl_table=11 NZ_CAJZAV010000197.1 RefSeq gene 1039 1620 . - . ID=gene-LDO49_RS19765;Name=LDO49_RS19765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19765;old_locus_tag=BCEP4_2760002 NZ_CAJZAV010000197.1 Protein Homology CDS 1039 1620 . - 0 ID=cds-WP_060073238.1;Parent=gene-LDO49_RS19765;Dbxref=GenBank:WP_060073238.1;Name=WP_060073238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405941.1;locus_tag=LDO49_RS19765;product=thioredoxin family protein;protein_id=WP_060073238.1;transl_table=11 NZ_CAJZAV010000197.1 RefSeq gene 1863 2603 . + . ID=gene-LDO49_RS19770;Name=LDO49_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19770;old_locus_tag=BCEP4_2760003 NZ_CAJZAV010000197.1 Protein Homology CDS 1863 2603 . + 0 ID=cds-WP_021161177.1;Parent=gene-LDO49_RS19770;Dbxref=GenBank:WP_021161177.1;Name=WP_021161177.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490080.1;locus_tag=LDO49_RS19770;product=response regulator;protein_id=WP_021161177.1;transl_table=11 NZ_CAJZAV010000197.1 RefSeq gene 2600 3842 . + . ID=gene-LDO49_RS19775;Name=LDO49_RS19775;end_range=3842,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19775;old_locus_tag=BCEP4_2760004;partial=true NZ_CAJZAV010000197.1 Protein Homology CDS 2600 3842 . + 0 ID=cds-WP_443797989.1;Parent=gene-LDO49_RS19775;Dbxref=GenBank:WP_443797989.1;Name=WP_443797989.1;end_range=3842,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766466.1;locus_tag=LDO49_RS19775;partial=true;product=ATP-binding protein;protein_id=WP_443797989.1;transl_table=11 ##sequence-region NZ_CAJZAV010000198.1 1 3147 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000198.1 RefSeq region 1 3147 . + . ID=NZ_CAJZAV010000198.1:1..3147;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_277 NZ_CAJZAV010000198.1 RefSeq gene 1 815 . - . ID=gene-LDO49_RS19780;Name=LDO49_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19780;partial=true;start_range=.,1 NZ_CAJZAV010000198.1 Protein Homology CDS 1 815 . - 0 ID=cds-WP_224052228.1;Parent=gene-LDO49_RS19780;Dbxref=GenBank:WP_224052228.1;Name=WP_224052228.1;Ontology_term=GO:0016740,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490863.1;locus_tag=LDO49_RS19780;partial=true;product=LpxL/LpxP family acyltransferase;protein_id=WP_224052228.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000198.1 RefSeq gene 812 2560 . - . ID=gene-LDO49_RS19785;Name=LDO49_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19785;old_locus_tag=BCEP4_2770002 NZ_CAJZAV010000198.1 Protein Homology CDS 812 2560 . - 0 ID=cds-WP_224052229.1;Parent=gene-LDO49_RS19785;Dbxref=GenBank:WP_224052229.1;Name=WP_224052229.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546212.1;locus_tag=LDO49_RS19785;product=acyl-CoA synthetase family protein;protein_id=WP_224052229.1;transl_table=11 NZ_CAJZAV010000198.1 RefSeq gene 2625 3147 . - . ID=gene-LDO49_RS19790;Name=LDO49_RS19790;end_range=3147,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19790;old_locus_tag=BCEP4_2770003;partial=true NZ_CAJZAV010000198.1 Protein Homology CDS 2625 3147 . - 1 ID=cds-WP_224052230.1;Parent=gene-LDO49_RS19790;Dbxref=GenBank:WP_224052230.1;Name=WP_224052230.1;end_range=3147,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492407.1;locus_tag=LDO49_RS19790;partial=true;product=hypothetical protein;protein_id=WP_224052230.1;transl_table=11 ##sequence-region NZ_CAJZAV010000199.1 1 3498 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000199.1 RefSeq region 1 3498 . + . ID=NZ_CAJZAV010000199.1:1..3498;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_278 NZ_CAJZAV010000199.1 RefSeq pseudogene 105 1120 . + . ID=gene-LDO49_RS19795;Name=LDO49_RS19795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS19795;pseudo=true NZ_CAJZAV010000199.1 Protein Homology CDS 105 1120 . + 0 ID=cds-LDO49_RS19795;Parent=gene-LDO49_RS19795;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548482.1;locus_tag=LDO49_RS19795;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CAJZAV010000199.1 RefSeq gene 1039 1251 . - . ID=gene-LDO49_RS19800;Name=LDO49_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19800;old_locus_tag=BCEP4_2780004 NZ_CAJZAV010000199.1 GeneMarkS-2+ CDS 1039 1251 . - 0 ID=cds-WP_124844547.1;Parent=gene-LDO49_RS19800;Dbxref=GenBank:WP_124844547.1;Name=WP_124844547.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS19800;product=transposase;protein_id=WP_124844547.1;transl_table=11 NZ_CAJZAV010000199.1 RefSeq gene 1715 2866 . + . ID=gene-LDO49_RS19805;Name=LDO49_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19805;old_locus_tag=BCEP4_2780005 NZ_CAJZAV010000199.1 Protein Homology CDS 1715 2866 . + 0 ID=cds-WP_060073641.1;Parent=gene-LDO49_RS19805;Dbxref=GenBank:WP_060073641.1;Name=WP_060073641.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194869.1;locus_tag=LDO49_RS19805;product=porin;protein_id=WP_060073641.1;transl_table=11 NZ_CAJZAV010000199.1 RefSeq pseudogene 3197 3399 . - . ID=gene-LDO49_RS19810;Name=LDO49_RS19810;end_range=3399,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS19810;partial=true;pseudo=true NZ_CAJZAV010000199.1 Protein Homology CDS 3197 3399 . - 0 ID=cds-LDO49_RS19810;Parent=gene-LDO49_RS19810;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=3399,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558340.1;locus_tag=LDO49_RS19810;partial=true;product=transposase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000200.1 1 3580 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000200.1 RefSeq region 1 3580 . + . ID=NZ_CAJZAV010000200.1:1..3580;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_279 NZ_CAJZAV010000200.1 RefSeq gene 1 701 . + . ID=gene-LDO49_RS19815;Name=LDO49_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19815;old_locus_tag=BCEP4_2790001;partial=true;start_range=.,1 NZ_CAJZAV010000200.1 Protein Homology CDS 1 701 . + 2 ID=cds-WP_224052231.1;Parent=gene-LDO49_RS19815;Dbxref=GenBank:WP_224052231.1;Name=WP_224052231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337007.1;locus_tag=LDO49_RS19815;partial=true;product=hypothetical protein;protein_id=WP_224052231.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000200.1 RefSeq gene 703 1335 . + . ID=gene-LDO49_RS19820;Name=LDO49_RS19820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19820;old_locus_tag=BCEP4_2790002 NZ_CAJZAV010000200.1 Protein Homology CDS 703 1335 . + 0 ID=cds-WP_124844463.1;Parent=gene-LDO49_RS19820;Dbxref=GenBank:WP_124844463.1;Name=WP_124844463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487268.1;locus_tag=LDO49_RS19820;product=hypothetical protein;protein_id=WP_124844463.1;transl_table=11 NZ_CAJZAV010000200.1 RefSeq gene 1336 2319 . + . ID=gene-LDO49_RS19825;Name=LDO49_RS19825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19825;old_locus_tag=BCEP4_2790003 NZ_CAJZAV010000200.1 Protein Homology CDS 1336 2319 . + 0 ID=cds-WP_021164011.1;Parent=gene-LDO49_RS19825;Dbxref=GenBank:WP_021164011.1;Name=WP_021164011.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498009.1;locus_tag=LDO49_RS19825;product=ferritin-like domain-containing protein;protein_id=WP_021164011.1;transl_table=11 NZ_CAJZAV010000200.1 RefSeq gene 2323 3303 . + . ID=gene-LDO49_RS19830;Name=LDO49_RS19830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19830;old_locus_tag=BCEP4_2790004 NZ_CAJZAV010000200.1 Protein Homology CDS 2323 3303 . + 0 ID=cds-WP_048027510.1;Parent=gene-LDO49_RS19830;Dbxref=GenBank:WP_048027510.1;Name=WP_048027510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350108.1;locus_tag=LDO49_RS19830;product=ketoacyl-ACP synthase III family protein;protein_id=WP_048027510.1;transl_table=11 NZ_CAJZAV010000200.1 RefSeq pseudogene 3355 3580 . + . ID=gene-LDO49_RS19835;Name=LDO49_RS19835;end_range=3580,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS19835;partial=true;pseudo=true;start_range=.,3355 NZ_CAJZAV010000200.1 Protein Homology CDS 3355 3580 . + 1 ID=cds-LDO49_RS19835;Parent=gene-LDO49_RS19835;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=3580,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487264.1;locus_tag=LDO49_RS19835;partial=true;product=PLP-dependent decarboxylase;pseudo=true;start_range=.,3355;transl_table=11 ##sequence-region NZ_CAJZAV010000201.1 1 19844 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000201.1 RefSeq region 1 19844 . + . ID=NZ_CAJZAV010000201.1:1..19844;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_28 NZ_CAJZAV010000201.1 RefSeq gene 131 510 . + . ID=gene-LDO49_RS19840;Name=LDO49_RS19840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19840;old_locus_tag=BCEP4_280001;partial=true;start_range=.,131 NZ_CAJZAV010000201.1 Protein Homology CDS 131 510 . + 2 ID=cds-WP_443797990.1;Parent=gene-LDO49_RS19840;Dbxref=GenBank:WP_443797990.1;Name=WP_443797990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538828.1;locus_tag=LDO49_RS19840;partial=true;product=DUF1214 domain-containing protein;protein_id=WP_443797990.1;start_range=.,131;transl_table=11 NZ_CAJZAV010000201.1 RefSeq gene 658 4461 . + . ID=gene-LDO49_RS19845;Name=LDO49_RS19845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19845;old_locus_tag=BCEP4_280002 NZ_CAJZAV010000201.1 Protein Homology CDS 658 4461 . + 0 ID=cds-WP_060074477.1;Parent=gene-LDO49_RS19845;Dbxref=GenBank:WP_060074477.1;Name=WP_060074477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408656.1;locus_tag=LDO49_RS19845;product=DUF748 domain-containing protein;protein_id=WP_060074477.1;transl_table=11 NZ_CAJZAV010000201.1 RefSeq gene 4521 4745 . - . ID=gene-LDO49_RS19850;Name=LDO49_RS19850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19850;old_locus_tag=BCEP4_280003 NZ_CAJZAV010000201.1 Protein Homology CDS 4521 4745 . - 0 ID=cds-WP_027790361.1;Parent=gene-LDO49_RS19850;Dbxref=GenBank:WP_027790361.1;Name=WP_027790361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659770.1;locus_tag=LDO49_RS19850;product=hypothetical protein;protein_id=WP_027790361.1;transl_table=11 NZ_CAJZAV010000201.1 RefSeq gene 5063 6736 . + . ID=gene-LDO49_RS19855;Name=LDO49_RS19855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19855;old_locus_tag=BCEP4_280004 NZ_CAJZAV010000201.1 Protein Homology CDS 5063 6736 . + 0 ID=cds-WP_372585857.1;Parent=gene-LDO49_RS19855;Dbxref=GenBank:WP_372585857.1;Name=WP_372585857.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353782.1;locus_tag=LDO49_RS19855;product=alkaline phosphatase family protein;protein_id=WP_372585857.1;transl_table=11 NZ_CAJZAV010000201.1 RefSeq gene 6818 7714 . - . ID=gene-LDO49_RS19860;Name=LDO49_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19860;old_locus_tag=BCEP4_280005 NZ_CAJZAV010000201.1 Protein Homology CDS 6818 7714 . - 0 ID=cds-WP_048023562.1;Parent=gene-LDO49_RS19860;Dbxref=GenBank:WP_048023562.1;Name=WP_048023562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533836.1;locus_tag=LDO49_RS19860;product=LysR substrate-binding domain-containing protein;protein_id=WP_048023562.1;transl_table=11 NZ_CAJZAV010000201.1 RefSeq gene 7877 8728 . + . ID=gene-LDO49_RS19865;Name=LDO49_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19865;old_locus_tag=BCEP4_280006 NZ_CAJZAV010000201.1 Protein Homology CDS 7877 8728 . + 0 ID=cds-WP_060228862.1;Parent=gene-LDO49_RS19865;Dbxref=GenBank:WP_060228862.1;Name=WP_060228862.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724147.1;locus_tag=LDO49_RS19865;product=ABC transporter permease;protein_id=WP_060228862.1;transl_table=11 NZ_CAJZAV010000201.1 RefSeq gene 8736 9779 . + . ID=gene-LDO49_RS19870;Name=LDO49_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19870;old_locus_tag=BCEP4_280007 NZ_CAJZAV010000201.1 Protein Homology CDS 8736 9779 . + 0 ID=cds-WP_224052233.1;Parent=gene-LDO49_RS19870;Dbxref=GenBank:WP_224052233.1;Name=WP_224052233.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548937.1;locus_tag=LDO49_RS19870;product=ABC transporter ATP-binding protein;protein_id=WP_224052233.1;transl_table=11 NZ_CAJZAV010000201.1 RefSeq gene 9806 10894 . + . ID=gene-LDO49_RS19875;Name=LDO49_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19875;old_locus_tag=BCEP4_280008 NZ_CAJZAV010000201.1 Protein Homology CDS 9806 10894 . + 0 ID=cds-WP_048023558.1;Parent=gene-LDO49_RS19875;Dbxref=GenBank:WP_048023558.1;Name=WP_048023558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202259.1;locus_tag=LDO49_RS19875;product=extracellular solute-binding protein;protein_id=WP_048023558.1;transl_table=11 NZ_CAJZAV010000201.1 RefSeq gene 10905 11735 . + . ID=gene-LDO49_RS19880;Name=LDO49_RS19880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19880;old_locus_tag=BCEP4_280009 NZ_CAJZAV010000201.1 Protein Homology CDS 10905 11735 . + 0 ID=cds-WP_059676031.1;Parent=gene-LDO49_RS19880;Dbxref=GenBank:WP_059676031.1;Name=WP_059676031.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694880.1;locus_tag=LDO49_RS19880;product=ABC transporter permease;protein_id=WP_059676031.1;transl_table=11 NZ_CAJZAV010000201.1 RefSeq gene 11812 12267 . + . ID=gene-LDO49_RS19885;Name=LDO49_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19885;old_locus_tag=BCEP4_280010 NZ_CAJZAV010000201.1 Protein Homology CDS 11812 12267 . + 0 ID=cds-WP_224052235.1;Parent=gene-LDO49_RS19885;Dbxref=GenBank:WP_224052235.1;Name=WP_224052235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013212276.1;locus_tag=LDO49_RS19885;product=TIGR00725 family protein;protein_id=WP_224052235.1;transl_table=11 NZ_CAJZAV010000201.1 RefSeq gene 12366 12560 . + . ID=gene-LDO49_RS19890;Name=LDO49_RS19890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19890;old_locus_tag=BCEP4_280011 NZ_CAJZAV010000201.1 Protein Homology CDS 12366 12560 . + 0 ID=cds-WP_048023552.1;Parent=gene-LDO49_RS19890;Dbxref=GenBank:WP_048023552.1;Name=WP_048023552.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353784.1;locus_tag=LDO49_RS19890;product=YqaE/Pmp3 family membrane protein;protein_id=WP_048023552.1;transl_table=11 NZ_CAJZAV010000201.1 RefSeq gene 12680 13996 . + . ID=gene-LDO49_RS19895;Name=LDO49_RS19895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19895;old_locus_tag=BCEP4_280012 NZ_CAJZAV010000201.1 Protein Homology CDS 12680 13996 . + 0 ID=cds-WP_060074473.1;Parent=gene-LDO49_RS19895;Dbxref=GenBank:WP_060074473.1;Name=WP_060074473.1;Ontology_term=GO:0016310,GO:0004674,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548941.1;locus_tag=LDO49_RS19895;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_060074473.1;transl_table=11 NZ_CAJZAV010000201.1 RefSeq gene 14011 14295 . + . ID=gene-LDO49_RS19900;Name=LDO49_RS19900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19900;old_locus_tag=BCEP4_280013 NZ_CAJZAV010000201.1 Protein Homology CDS 14011 14295 . + 0 ID=cds-WP_048023547.1;Parent=gene-LDO49_RS19900;Dbxref=GenBank:WP_048023547.1;Name=WP_048023547.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480347.1;locus_tag=LDO49_RS19900;product=helix-turn-helix domain-containing protein;protein_id=WP_048023547.1;transl_table=11 NZ_CAJZAV010000201.1 RefSeq gene 14317 15222 . - . ID=gene-LDO49_RS19905;Name=LDO49_RS19905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19905;old_locus_tag=BCEP4_280014 NZ_CAJZAV010000201.1 Protein Homology CDS 14317 15222 . - 0 ID=cds-WP_059621841.1;Parent=gene-LDO49_RS19905;Dbxref=GenBank:WP_059621841.1;Name=WP_059621841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353785.1;locus_tag=LDO49_RS19905;product=LysR substrate-binding domain-containing protein;protein_id=WP_059621841.1;transl_table=11 NZ_CAJZAV010000201.1 RefSeq gene 15323 16018 . + . ID=gene-LDO49_RS19910;Name=LDO49_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19910;old_locus_tag=BCEP4_280015 NZ_CAJZAV010000201.1 Protein Homology CDS 15323 16018 . + 0 ID=cds-WP_059487552.1;Parent=gene-LDO49_RS19910;Dbxref=GenBank:WP_059487552.1;Name=WP_059487552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353786.1;locus_tag=LDO49_RS19910;product=hypothetical protein;protein_id=WP_059487552.1;transl_table=11 NZ_CAJZAV010000201.1 RefSeq gene 16163 16345 . - . ID=gene-LDO49_RS19915;Name=LDO49_RS19915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19915;old_locus_tag=BCEP4_280016 NZ_CAJZAV010000201.1 Protein Homology CDS 16163 16345 . - 0 ID=cds-WP_042978028.1;Parent=gene-LDO49_RS19915;Dbxref=GenBank:WP_042978028.1;Name=WP_042978028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493604.1;locus_tag=LDO49_RS19915;product=hypothetical protein;protein_id=WP_042978028.1;transl_table=11 NZ_CAJZAV010000201.1 RefSeq gene 16317 17324 . - . ID=gene-LDO49_RS19920;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=LDO49_RS19920;old_locus_tag=BCEP4_280017 NZ_CAJZAV010000201.1 Protein Homology CDS 16317 17324 . - 0 ID=cds-WP_021163567.1;Parent=gene-LDO49_RS19920;Dbxref=GenBank:WP_021163567.1;Name=WP_021163567.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548943.1;locus_tag=LDO49_RS19920;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_021163567.1;transl_table=11 NZ_CAJZAV010000201.1 RefSeq gene 17355 18776 . - . ID=gene-LDO49_RS19925;Name=LDO49_RS19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19925;old_locus_tag=BCEP4_280018 NZ_CAJZAV010000201.1 Protein Homology CDS 17355 18776 . - 0 ID=cds-WP_021163568.1;Parent=gene-LDO49_RS19925;Dbxref=GenBank:WP_021163568.1;Name=WP_021163568.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900865.1;locus_tag=LDO49_RS19925;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_021163568.1;transl_table=11 NZ_CAJZAV010000201.1 RefSeq gene 19280 19606 . + . ID=gene-LDO49_RS19930;Name=LDO49_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19930;old_locus_tag=BCEP4_280019 NZ_CAJZAV010000201.1 Protein Homology CDS 19280 19606 . + 0 ID=cds-WP_021163569.1;Parent=gene-LDO49_RS19930;Dbxref=GenBank:WP_021163569.1;Name=WP_021163569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487960.1;locus_tag=LDO49_RS19930;product=hypothetical protein;protein_id=WP_021163569.1;transl_table=11 NZ_CAJZAV010000201.1 RefSeq pseudogene 19620 19844 . + . ID=gene-LDO49_RS19935;Name=LDO49_RS19935;end_range=19844,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS19935;partial=true;pseudo=true NZ_CAJZAV010000201.1 Protein Homology CDS 19620 19844 . + 0 ID=cds-LDO49_RS19935;Parent=gene-LDO49_RS19935;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=19844,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548946.1;locus_tag=LDO49_RS19935;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000202.1 1 749 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000202.1 RefSeq region 1 749 . + . ID=NZ_CAJZAV010000202.1:1..749;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_280 NZ_CAJZAV010000202.1 RefSeq pseudogene 1 221 . + . ID=gene-LDO49_RS19940;Name=LDO49_RS19940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS19940;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000202.1 Protein Homology CDS 1 221 . + 2 ID=cds-LDO49_RS19940;Parent=gene-LDO49_RS19940;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694424.1;locus_tag=LDO49_RS19940;partial=true;product=patatin-like phospholipase family protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAV010000203.1 1 4136 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000203.1 RefSeq region 1 4136 . + . ID=NZ_CAJZAV010000203.1:1..4136;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_281 NZ_CAJZAV010000203.1 RefSeq pseudogene 1 661 . + . ID=gene-LDO49_RS19945;Name=LDO49_RS19945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS19945;old_locus_tag=BCEP4_2810001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000203.1 Protein Homology CDS 1 661 . + 1 ID=cds-LDO49_RS19945;Parent=gene-LDO49_RS19945;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656485.1;locus_tag=LDO49_RS19945;partial=true;product=polyhydroxyalkanoate depolymerase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000203.1 RefSeq gene 671 1315 . - . ID=gene-LDO49_RS19950;Name=LDO49_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19950;old_locus_tag=BCEP4_2810002 NZ_CAJZAV010000203.1 Protein Homology CDS 671 1315 . - 0 ID=cds-WP_224052237.1;Parent=gene-LDO49_RS19950;Dbxref=GenBank:WP_224052237.1;Name=WP_224052237.1;Ontology_term=GO:0016772;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351586.1;locus_tag=LDO49_RS19950;product=phosphoribosyltransferase;protein_id=WP_224052237.1;transl_table=11 NZ_CAJZAV010000203.1 RefSeq gene 1441 1962 . - . ID=gene-LDO49_RS19955;Name=LDO49_RS19955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19955;old_locus_tag=BCEP4_2810003 NZ_CAJZAV010000203.1 Protein Homology CDS 1441 1962 . - 0 ID=cds-WP_224052238.1;Parent=gene-LDO49_RS19955;Dbxref=GenBank:WP_224052238.1;Name=WP_224052238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363539.1;locus_tag=LDO49_RS19955;product=phospholipase D-like domain-containing protein;protein_id=WP_224052238.1;transl_table=11 NZ_CAJZAV010000203.1 RefSeq gene 2068 3000 . - . ID=gene-LDO49_RS19960;Name=mdcH;gbkey=Gene;gene=mdcH;gene_biotype=protein_coding;locus_tag=LDO49_RS19960;old_locus_tag=BCEP4_2810004 NZ_CAJZAV010000203.1 Protein Homology CDS 2068 3000 . - 0 ID=cds-WP_224052240.1;Parent=gene-LDO49_RS19960;Dbxref=GenBank:WP_224052240.1;Name=WP_224052240.1;Ontology_term=GO:0016740;gbkey=CDS;gene=mdcH;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897449.1;locus_tag=LDO49_RS19960;product=malonate decarboxylase subunit epsilon;protein_id=WP_224052240.1;transl_table=11 NZ_CAJZAV010000203.1 RefSeq gene 2997 3243 . - . ID=gene-LDO49_RS38250;Name=LDO49_RS38250;end_range=3243,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38250;partial=true NZ_CAJZAV010000203.1 Protein Homology CDS 2997 3243 . - 1 ID=cds-WP_443797991.1;Parent=gene-LDO49_RS38250;Dbxref=GenBank:WP_443797991.1;Name=WP_443797991.1;Ontology_term=GO:0016310,GO:0005524,GO:0046917;end_range=3243,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405102.1;locus_tag=LDO49_RS38250;partial=true;product=triphosphoribosyl-dephospho-CoA synthase;protein_id=WP_443797991.1;transl_table=11 NZ_CAJZAV010000203.1 RefSeq pseudogene 3254 3762 . - . ID=gene-LDO49_RS37210;Name=LDO49_RS37210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37210;old_locus_tag=BCEP4_2810006;partial=true;pseudo=true;start_range=.,3254 NZ_CAJZAV010000203.1 Protein Homology CDS 3254 3762 . - 0 ID=cds-LDO49_RS37210;Parent=gene-LDO49_RS37210;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0016310,GO:0005524,GO:0046917;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF013991.6;locus_tag=LDO49_RS37210;partial=true;product=triphosphoribosyl-dephospho-CoA synthase;pseudo=true;start_range=.,3254;transl_table=11 NZ_CAJZAV010000203.1 RefSeq gene 3759 4136 . - . ID=gene-LDO49_RS19975;Name=mdcG;end_range=4136,.;gbkey=Gene;gene=mdcG;gene_biotype=protein_coding;locus_tag=LDO49_RS19975;old_locus_tag=BCEP4_2810007;partial=true NZ_CAJZAV010000203.1 Protein Homology CDS 3759 4136 . - 0 ID=cds-WP_224052239.1;Parent=gene-LDO49_RS19975;Dbxref=GenBank:WP_224052239.1;Name=WP_224052239.1;Ontology_term=GO:0016772;end_range=4136,.;gbkey=CDS;gene=mdcG;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476361.1;locus_tag=LDO49_RS19975;partial=true;product=malonate decarboxylase holo-[acyl-carrier-protein] synthase;protein_id=WP_224052239.1;transl_table=11 ##sequence-region NZ_CAJZAV010000204.1 1 547 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000204.1 RefSeq region 1 547 . + . ID=NZ_CAJZAV010000204.1:1..547;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_282 NZ_CAJZAV010000204.1 RefSeq gene 1 214 . - . ID=gene-LDO49_RS19980;Name=tnpB;gbkey=Gene;gene=tnpB;gene_biotype=protein_coding;locus_tag=LDO49_RS19980;partial=true;start_range=.,1 NZ_CAJZAV010000204.1 Protein Homology CDS 1 214 . - 0 ID=cds-WP_148093870.1;Parent=gene-LDO49_RS19980;Dbxref=GenBank:WP_148093870.1;Name=WP_148093870.1;Note=TnpB%2C as the term is used for proteins encoded by IS66 family insertion elements%2C is considered an accessory protein%2C since TnpC%2C encoded by a neighboring gene%2C is a DDE family transposase.;gbkey=CDS;gene=tnpB;inference=COORDINATES: protein motif:HMM:NF017528.6;locus_tag=LDO49_RS19980;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_148093870.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000204.1 RefSeq gene 190 547 . - . ID=gene-LDO49_RS19985;Name=LDO49_RS19985;end_range=547,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19985;old_locus_tag=BCEP4_2820002;partial=true NZ_CAJZAV010000204.1 Protein Homology CDS 190 547 . - 1 ID=cds-WP_224052241.1;Parent=gene-LDO49_RS19985;Dbxref=GenBank:WP_224052241.1;Name=WP_224052241.1;end_range=547,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700155.1;locus_tag=LDO49_RS19985;partial=true;product=IS66 family insertion sequence element accessory protein TnpB;protein_id=WP_224052241.1;transl_table=11 ##sequence-region NZ_CAJZAV010000205.1 1 1338 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000205.1 RefSeq region 1 1338 . + . ID=NZ_CAJZAV010000205.1:1..1338;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_283 NZ_CAJZAV010000205.1 RefSeq gene 1 381 . - . ID=gene-LDO49_RS19990;Name=LDO49_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19990;partial=true;start_range=.,1 NZ_CAJZAV010000205.1 Protein Homology CDS 1 381 . - 0 ID=cds-WP_224052242.1;Parent=gene-LDO49_RS19990;Dbxref=GenBank:WP_224052242.1;Name=WP_224052242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497786.1;locus_tag=LDO49_RS19990;partial=true;product=nuclear transport factor 2 family protein;protein_id=WP_224052242.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000205.1 RefSeq gene 395 874 . - . ID=gene-LDO49_RS19995;Name=LDO49_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS19995;old_locus_tag=BCEP4_2830002 NZ_CAJZAV010000205.1 Protein Homology CDS 395 874 . - 0 ID=cds-WP_048026203.1;Parent=gene-LDO49_RS19995;Dbxref=GenBank:WP_048026203.1;Name=WP_048026203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486060.1;locus_tag=LDO49_RS19995;product=SRPBCC domain-containing protein;protein_id=WP_048026203.1;transl_table=11 NZ_CAJZAV010000205.1 RefSeq gene 1221 1338 . + . ID=gene-LDO49_RS37425;Name=LDO49_RS37425;end_range=1338,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37425;partial=true NZ_CAJZAV010000205.1 Protein Homology CDS 1221 1338 . + 0 ID=cds-WP_308043941.1;Parent=gene-LDO49_RS37425;Dbxref=GenBank:WP_308043941.1;Name=WP_308043941.1;end_range=1338,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352616.1;locus_tag=LDO49_RS37425;partial=true;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_308043941.1;transl_table=11 ##sequence-region NZ_CAJZAV010000206.1 1 935 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000206.1 RefSeq region 1 935 . + . ID=NZ_CAJZAV010000206.1:1..935;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_284 NZ_CAJZAV010000206.1 RefSeq gene 7 159 . + . ID=gene-LDO49_RS37580;Name=LDO49_RS37580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37580;old_locus_tag=BCEP4_2840001 NZ_CAJZAV010000206.1 Protein Homology CDS 7 159 . + 0 ID=cds-WP_224052245.1;Parent=gene-LDO49_RS37580;Dbxref=GenBank:WP_224052245.1;Name=WP_224052245.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017528.6;locus_tag=LDO49_RS37580;product=hypothetical protein;protein_id=WP_224052245.1;transl_table=11 NZ_CAJZAV010000206.1 RefSeq gene 173 935 . + . ID=gene-LDO49_RS20010;Name=LDO49_RS20010;end_range=935,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20010;partial=true NZ_CAJZAV010000206.1 Protein Homology CDS 173 935 . + 0 ID=cds-WP_224052244.1;Parent=gene-LDO49_RS20010;Dbxref=GenBank:WP_224052244.1;Name=WP_224052244.1;end_range=935,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019576733.1;locus_tag=LDO49_RS20010;partial=true;product=IS66 family transposase;protein_id=WP_224052244.1;transl_table=11 ##sequence-region NZ_CAJZAV010000207.1 1 1244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000207.1 RefSeq region 1 1244 . + . ID=NZ_CAJZAV010000207.1:1..1244;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_285 NZ_CAJZAV010000207.1 RefSeq gene 1 269 . + . ID=gene-LDO49_RS20015;Name=LDO49_RS20015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20015;old_locus_tag=BCEP4_2850001;partial=true;start_range=.,1 NZ_CAJZAV010000207.1 Protein Homology CDS 1 269 . + 2 ID=cds-WP_290369869.1;Parent=gene-LDO49_RS20015;Dbxref=GenBank:WP_290369869.1;Name=WP_290369869.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481563.1;locus_tag=LDO49_RS20015;partial=true;product=phosphoribosyltransferase family protein;protein_id=WP_290369869.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000207.1 RefSeq gene 375 845 . + . ID=gene-LDO49_RS20020;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=LDO49_RS20020;old_locus_tag=BCEP4_2850002 NZ_CAJZAV010000207.1 Protein Homology CDS 375 845 . + 0 ID=cds-WP_048025693.1;Parent=gene-LDO49_RS20020;Dbxref=GenBank:WP_048025693.1;Name=WP_048025693.1;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763321.1;locus_tag=LDO49_RS20020;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_048025693.1;transl_table=11 NZ_CAJZAV010000207.1 RefSeq gene 880 1244 . - . ID=gene-LDO49_RS20025;Name=LDO49_RS20025;end_range=1244,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20025;old_locus_tag=BCEP4_2850003;partial=true NZ_CAJZAV010000207.1 Protein Homology CDS 880 1244 . - 2 ID=cds-WP_224052246.1;Parent=gene-LDO49_RS20025;Dbxref=GenBank:WP_224052246.1;Name=WP_224052246.1;end_range=1244,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886109.1;locus_tag=LDO49_RS20025;partial=true;product=macro domain-containing protein;protein_id=WP_224052246.1;transl_table=11 ##sequence-region NZ_CAJZAV010000208.1 1 1303 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000208.1 RefSeq region 1 1303 . + . ID=NZ_CAJZAV010000208.1:1..1303;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_286 NZ_CAJZAV010000208.1 RefSeq pseudogene 1 291 . - . ID=gene-LDO49_RS20030;Name=LDO49_RS20030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS20030;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000208.1 Protein Homology CDS 1 291 . - 0 ID=cds-LDO49_RS20030;Parent=gene-LDO49_RS20030;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363887.1;locus_tag=LDO49_RS20030;partial=true;product=precorrin-3B synthase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000208.1 cmsearch riboswitch 398 588 . - . ID=id-NZ_CAJZAV010000208.1:398..588;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAV010000208.1 RefSeq gene 731 1027 . + . ID=gene-LDO49_RS20035;Name=LDO49_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20035;old_locus_tag=BCEP4_2860002 NZ_CAJZAV010000208.1 GeneMarkS-2+ CDS 731 1027 . + 0 ID=cds-WP_021163554.1;Parent=gene-LDO49_RS20035;Dbxref=GenBank:WP_021163554.1;Name=WP_021163554.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS20035;product=hypothetical protein;protein_id=WP_021163554.1;transl_table=11 NZ_CAJZAV010000208.1 RefSeq pseudogene 1152 1303 . + . ID=gene-LDO49_RS20040;Name=LDO49_RS20040;end_range=1303,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS20040;partial=true;pseudo=true NZ_CAJZAV010000208.1 Protein Homology CDS 1152 1303 . + 0 ID=cds-LDO49_RS20040;Parent=gene-LDO49_RS20040;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1303,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213336.1;locus_tag=LDO49_RS20040;partial=true;product=bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000209.1 1 1328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000209.1 RefSeq region 1 1328 . + . ID=NZ_CAJZAV010000209.1:1..1328;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_287 NZ_CAJZAV010000209.1 RefSeq gene 121 1328 . - . ID=gene-LDO49_RS20045;Name=LDO49_RS20045;end_range=1328,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20045;old_locus_tag=BCEP4_2870001;partial=true NZ_CAJZAV010000209.1 Protein Homology CDS 121 1328 . - 2 ID=cds-WP_224052247.1;Parent=gene-LDO49_RS20045;Dbxref=GenBank:WP_224052247.1;Name=WP_224052247.1;Ontology_term=GO:0016491;end_range=1328,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658576.1;locus_tag=LDO49_RS20045;partial=true;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_224052247.1;transl_table=11 ##sequence-region NZ_CAJZAV010000210.1 1 1877 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000210.1 RefSeq region 1 1877 . + . ID=NZ_CAJZAV010000210.1:1..1877;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_288 NZ_CAJZAV010000210.1 RefSeq gene 1 403 . + . ID=gene-LDO49_RS20050;Name=LDO49_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20050;old_locus_tag=BCEP4_2880001;partial=true;start_range=.,1 NZ_CAJZAV010000210.1 Protein Homology CDS 1 403 . + 1 ID=cds-WP_224052248.1;Parent=gene-LDO49_RS20050;Dbxref=GenBank:WP_224052248.1;Name=WP_224052248.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350548.1;locus_tag=LDO49_RS20050;partial=true;product=ethanolamine ammonia-lyase light chain EutC;protein_id=WP_224052248.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000210.1 RefSeq gene 502 1386 . - . ID=gene-LDO49_RS20055;Name=LDO49_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20055;old_locus_tag=BCEP4_2880002 NZ_CAJZAV010000210.1 Protein Homology CDS 502 1386 . - 0 ID=cds-WP_059493885.1;Parent=gene-LDO49_RS20055;Dbxref=GenBank:WP_059493885.1;Name=WP_059493885.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546777.1;locus_tag=LDO49_RS20055;product=LysR family transcriptional regulator;protein_id=WP_059493885.1;transl_table=11 NZ_CAJZAV010000210.1 RefSeq gene 1542 1877 . + . ID=gene-LDO49_RS20060;Name=LDO49_RS20060;end_range=1877,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20060;partial=true NZ_CAJZAV010000210.1 Protein Homology CDS 1542 1877 . + 0 ID=cds-WP_224052250.1;Parent=gene-LDO49_RS20060;Dbxref=GenBank:WP_224052250.1;Name=WP_224052250.1;Ontology_term=GO:0055085,GO:0022857;end_range=1877,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546776.1;locus_tag=LDO49_RS20060;partial=true;product=MFS transporter;protein_id=WP_224052250.1;transl_table=11 ##sequence-region NZ_CAJZAV010000211.1 1 578 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000211.1 RefSeq region 1 578 . + . ID=NZ_CAJZAV010000211.1:1..578;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_289 NZ_CAJZAV010000211.1 RefSeq gene 197 393 . + . ID=gene-LDO49_RS38255;Name=LDO49_RS38255;end_range=393,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38255;partial=true NZ_CAJZAV010000211.1 Protein Homology CDS 197 393 . + 0 ID=cds-WP_443797992.1;Parent=gene-LDO49_RS38255;Dbxref=GenBank:WP_443797992.1;Name=WP_443797992.1;Ontology_term=GO:0006749,GO:0005515;end_range=393,.;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214259.1;locus_tag=LDO49_RS38255;partial=true;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_443797992.1;transl_table=11 NZ_CAJZAV010000211.1 RefSeq pseudogene 404 578 . + . ID=gene-LDO49_RS38260;Name=LDO49_RS38260;end_range=578,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38260;partial=true;pseudo=true;start_range=.,404 NZ_CAJZAV010000211.1 Protein Homology CDS 404 578 . + 1 ID=cds-LDO49_RS38260;Parent=gene-LDO49_RS38260;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=578,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214259.1;locus_tag=LDO49_RS38260;partial=true;product=glutathione S-transferase;pseudo=true;start_range=.,404;transl_table=11 ##sequence-region NZ_CAJZAV010000212.1 1 53284 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000212.1 RefSeq region 1 53284 . + . ID=NZ_CAJZAV010000212.1:1..53284;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_29 NZ_CAJZAV010000212.1 RefSeq gene 1 222 . + . ID=gene-LDO49_RS20070;Name=LDO49_RS20070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20070;old_locus_tag=BCEP4_290002;partial=true;start_range=.,1 NZ_CAJZAV010000212.1 Protein Homology CDS 1 222 . + 0 ID=cds-WP_290369870.1;Parent=gene-LDO49_RS20070;Dbxref=GenBank:WP_290369870.1;Name=WP_290369870.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880483.1;locus_tag=LDO49_RS20070;partial=true;product=NAD(P)-dependent oxidoreductase;protein_id=WP_290369870.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 384 1784 . + . ID=gene-LDO49_RS20075;Name=LDO49_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20075;old_locus_tag=BCEP4_290003 NZ_CAJZAV010000212.1 Protein Homology CDS 384 1784 . + 0 ID=cds-WP_224052252.1;Parent=gene-LDO49_RS20075;Dbxref=GenBank:WP_224052252.1;Name=WP_224052252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749695.1;locus_tag=LDO49_RS20075;product=aspartate aminotransferase family protein;protein_id=WP_224052252.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 1870 2361 . + . ID=gene-LDO49_RS20080;Name=LDO49_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20080;old_locus_tag=BCEP4_290004 NZ_CAJZAV010000212.1 Protein Homology CDS 1870 2361 . + 0 ID=cds-WP_006749694.1;Parent=gene-LDO49_RS20080;Dbxref=GenBank:WP_006749694.1;Name=WP_006749694.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880485.1;locus_tag=LDO49_RS20080;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_006749694.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 2467 3939 . + . ID=gene-LDO49_RS20085;Name=LDO49_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20085;old_locus_tag=BCEP4_290005 NZ_CAJZAV010000212.1 Protein Homology CDS 2467 3939 . + 0 ID=cds-WP_059485541.1;Parent=gene-LDO49_RS20085;Dbxref=GenBank:WP_059485541.1;Name=WP_059485541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100339.1;locus_tag=LDO49_RS20085;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_059485541.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 4072 4668 . + . ID=gene-LDO49_RS20090;Name=LDO49_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20090;old_locus_tag=BCEP4_290006 NZ_CAJZAV010000212.1 Protein Homology CDS 4072 4668 . + 0 ID=cds-WP_048027395.1;Parent=gene-LDO49_RS20090;Dbxref=GenBank:WP_048027395.1;Name=WP_048027395.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690855.1;locus_tag=LDO49_RS20090;product=TetR/AcrR family transcriptional regulator;protein_id=WP_048027395.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 4719 6200 . + . ID=gene-LDO49_RS20095;Name=LDO49_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20095;old_locus_tag=BCEP4_290007 NZ_CAJZAV010000212.1 Protein Homology CDS 4719 6200 . + 0 ID=cds-WP_048027396.1;Parent=gene-LDO49_RS20095;Dbxref=GenBank:WP_048027396.1;Name=WP_048027396.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483292.1;locus_tag=LDO49_RS20095;product=MFS transporter;protein_id=WP_048027396.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 6271 6579 . + . ID=gene-LDO49_RS20100;Name=LDO49_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20100;old_locus_tag=BCEP4_290008 NZ_CAJZAV010000212.1 Protein Homology CDS 6271 6579 . + 0 ID=cds-WP_224052253.1;Parent=gene-LDO49_RS20100;Dbxref=GenBank:WP_224052253.1;Name=WP_224052253.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549849.1;locus_tag=LDO49_RS20100;product=EthD family reductase;protein_id=WP_224052253.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 6708 7007 . + . ID=gene-LDO49_RS20105;Name=LDO49_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20105;old_locus_tag=BCEP4_290009 NZ_CAJZAV010000212.1 GeneMarkS-2+ CDS 6708 7007 . + 0 ID=cds-WP_224052254.1;Parent=gene-LDO49_RS20105;Dbxref=GenBank:WP_224052254.1;Name=WP_224052254.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS20105;product=hypothetical protein;protein_id=WP_224052254.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq pseudogene 7129 8603 . - . ID=gene-LDO49_RS20110;Name=LDO49_RS20110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS20110;old_locus_tag=BCEP4_290011;pseudo=true NZ_CAJZAV010000212.1 Protein Homology CDS 7129 8603 . - 0 ID=cds-LDO49_RS20110;Parent=gene-LDO49_RS20110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483303.1;locus_tag=LDO49_RS20110;product=HD domain-containing phosphohydrolase;pseudo=true;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 8899 9474 . + . ID=gene-LDO49_RS20115;Name=LDO49_RS20115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20115;old_locus_tag=BCEP4_290012 NZ_CAJZAV010000212.1 Protein Homology CDS 8899 9474 . + 0 ID=cds-WP_124475430.1;Parent=gene-LDO49_RS20115;Dbxref=GenBank:WP_124475430.1;Name=WP_124475430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483276.1;locus_tag=LDO49_RS20115;product=DUF308 domain-containing protein;protein_id=WP_124475430.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 9600 15659 . - . ID=gene-LDO49_RS20120;Name=LDO49_RS20120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20120;old_locus_tag=BCEP4_290013 NZ_CAJZAV010000212.1 Protein Homology CDS 9600 15659 . - 0 ID=cds-WP_124475431.1;Parent=gene-LDO49_RS20120;Dbxref=GenBank:WP_124475431.1;Name=WP_124475431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016347216.1;locus_tag=LDO49_RS20120;product=ATP-binding protein;protein_id=WP_124475431.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 15991 16641 . - . ID=gene-LDO49_RS20125;Name=LDO49_RS20125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20125;old_locus_tag=BCEP4_290014 NZ_CAJZAV010000212.1 Protein Homology CDS 15991 16641 . - 0 ID=cds-WP_224052255.1;Parent=gene-LDO49_RS20125;Dbxref=GenBank:WP_224052255.1;Name=WP_224052255.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493725.1;locus_tag=LDO49_RS20125;product=GntR family transcriptional regulator;protein_id=WP_224052255.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 16695 17861 . + . ID=gene-LDO49_RS20130;Name=LDO49_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20130;old_locus_tag=BCEP4_290016 NZ_CAJZAV010000212.1 Protein Homology CDS 16695 17861 . + 0 ID=cds-WP_224052256.1;Parent=gene-LDO49_RS20130;Dbxref=GenBank:WP_224052256.1;Name=WP_224052256.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483280.1;locus_tag=LDO49_RS20130;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_224052256.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 18036 19382 . - . ID=gene-LDO49_RS20135;Name=LDO49_RS20135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20135;old_locus_tag=BCEP4_290017 NZ_CAJZAV010000212.1 Protein Homology CDS 18036 19382 . - 0 ID=cds-WP_060147580.1;Parent=gene-LDO49_RS20135;Dbxref=GenBank:WP_060147580.1;Name=WP_060147580.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498148.1;locus_tag=LDO49_RS20135;product=MFS transporter;protein_id=WP_060147580.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 19680 20717 . + . ID=gene-LDO49_RS20140;Name=LDO49_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20140;old_locus_tag=BCEP4_290018 NZ_CAJZAV010000212.1 Protein Homology CDS 19680 20717 . + 0 ID=cds-WP_175851698.1;Parent=gene-LDO49_RS20140;Dbxref=GenBank:WP_175851698.1;Name=WP_175851698.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336821.1;locus_tag=LDO49_RS20140;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_175851698.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 20907 22688 . + . ID=gene-LDO49_RS20145;Name=LDO49_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20145;old_locus_tag=BCEP4_290019 NZ_CAJZAV010000212.1 Protein Homology CDS 20907 22688 . + 0 ID=cds-WP_048027410.1;Parent=gene-LDO49_RS20145;Dbxref=GenBank:WP_048027410.1;Name=WP_048027410.1;Ontology_term=GO:0016836,GO:0051536;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217270.1;locus_tag=LDO49_RS20145;product=IlvD/Edd family dehydratase;protein_id=WP_048027410.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 22721 23899 . + . ID=gene-LDO49_RS20150;Name=LDO49_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20150;old_locus_tag=BCEP4_290020 NZ_CAJZAV010000212.1 Protein Homology CDS 22721 23899 . + 0 ID=cds-WP_059648731.1;Parent=gene-LDO49_RS20150;Dbxref=GenBank:WP_059648731.1;Name=WP_059648731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549856.1;locus_tag=LDO49_RS20150;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_059648731.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq pseudogene 24078 24557 . - . ID=gene-LDO49_RS20155;Name=LDO49_RS20155;end_range=24557,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS20155;old_locus_tag=BCEP4_290021;partial=true;pseudo=true NZ_CAJZAV010000212.1 Protein Homology CDS 24078 24557 . - 0 ID=cds-LDO49_RS20155;Parent=gene-LDO49_RS20155;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007165,GO:0016020;end_range=24557,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099662.1;locus_tag=LDO49_RS20155;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 24956 26542 . + . ID=gene-LDO49_RS20160;Name=LDO49_RS20160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20160;old_locus_tag=BCEP4_290023 NZ_CAJZAV010000212.1 Protein Homology CDS 24956 26542 . + 0 ID=cds-WP_059621373.1;Parent=gene-LDO49_RS20160;Dbxref=GenBank:WP_059621373.1;Name=WP_059621373.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549858.1;locus_tag=LDO49_RS20160;product=methyl-accepting chemotaxis protein;protein_id=WP_059621373.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 26770 28293 . - . ID=gene-LDO49_RS20165;Name=LDO49_RS20165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20165;old_locus_tag=BCEP4_290024 NZ_CAJZAV010000212.1 Protein Homology CDS 26770 28293 . - 0 ID=cds-WP_224052257.1;Parent=gene-LDO49_RS20165;Dbxref=GenBank:WP_224052257.1;Name=WP_224052257.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336832.1;locus_tag=LDO49_RS20165;product=UxaA family hydrolase;protein_id=WP_224052257.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 28290 29450 . - . ID=gene-LDO49_RS20170;Name=LDO49_RS20170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20170;old_locus_tag=BCEP4_290025 NZ_CAJZAV010000212.1 Protein Homology CDS 28290 29450 . - 0 ID=cds-WP_224052258.1;Parent=gene-LDO49_RS20170;Dbxref=GenBank:WP_224052258.1;Name=WP_224052258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549862.1;locus_tag=LDO49_RS20170;product=mannitol dehydrogenase family protein;protein_id=WP_224052258.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 29482 30492 . - . ID=gene-LDO49_RS20175;Name=LDO49_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20175;old_locus_tag=BCEP4_290026 NZ_CAJZAV010000212.1 Protein Homology CDS 29482 30492 . - 0 ID=cds-WP_060147584.1;Parent=gene-LDO49_RS20175;Dbxref=GenBank:WP_060147584.1;Name=WP_060147584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006052099.1;locus_tag=LDO49_RS20175;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_060147584.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 30515 31390 . - . ID=gene-LDO49_RS20180;Name=LDO49_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20180;old_locus_tag=BCEP4_290027 NZ_CAJZAV010000212.1 Protein Homology CDS 30515 31390 . - 0 ID=cds-WP_060147585.1;Parent=gene-LDO49_RS20180;Dbxref=GenBank:WP_060147585.1;Name=WP_060147585.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336835.1;locus_tag=LDO49_RS20180;product=amidohydrolase family protein;protein_id=WP_060147585.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 31387 32403 . - . ID=gene-LDO49_RS20185;Name=LDO49_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20185;old_locus_tag=BCEP4_290028 NZ_CAJZAV010000212.1 Protein Homology CDS 31387 32403 . - 0 ID=cds-WP_060147586.1;Parent=gene-LDO49_RS20185;Dbxref=GenBank:WP_060147586.1;Name=WP_060147586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549865.1;locus_tag=LDO49_RS20185;product=aldo/keto reductase;protein_id=WP_060147586.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 32440 33387 . - . ID=gene-LDO49_RS20190;Name=LDO49_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20190;old_locus_tag=BCEP4_290029 NZ_CAJZAV010000212.1 Protein Homology CDS 32440 33387 . - 0 ID=cds-WP_060147587.1;Parent=gene-LDO49_RS20190;Dbxref=GenBank:WP_060147587.1;Name=WP_060147587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757164.1;locus_tag=LDO49_RS20190;product=ABC transporter substrate-binding protein;protein_id=WP_060147587.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 33430 34461 . - . ID=gene-LDO49_RS20195;Name=LDO49_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20195;old_locus_tag=BCEP4_290030 NZ_CAJZAV010000212.1 Protein Homology CDS 33430 34461 . - 0 ID=cds-WP_011549867.1;Parent=gene-LDO49_RS20195;Dbxref=GenBank:WP_011549867.1;Name=WP_011549867.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336837.1;locus_tag=LDO49_RS20195;product=ABC transporter permease;protein_id=WP_011549867.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 34454 35998 . - . ID=gene-LDO49_RS20200;Name=LDO49_RS20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20200;old_locus_tag=BCEP4_290031 NZ_CAJZAV010000212.1 Protein Homology CDS 34454 35998 . - 0 ID=cds-WP_224052259.1;Parent=gene-LDO49_RS20200;Dbxref=GenBank:WP_224052259.1;Name=WP_224052259.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549868.1;locus_tag=LDO49_RS20200;product=sugar ABC transporter ATP-binding protein;protein_id=WP_224052259.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 36232 36933 . + . ID=gene-LDO49_RS20205;Name=LDO49_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20205;old_locus_tag=BCEP4_290033 NZ_CAJZAV010000212.1 Protein Homology CDS 36232 36933 . + 0 ID=cds-WP_059485518.1;Parent=gene-LDO49_RS20205;Dbxref=GenBank:WP_059485518.1;Name=WP_059485518.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549869.1;locus_tag=LDO49_RS20205;product=FadR/GntR family transcriptional regulator;protein_id=WP_059485518.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 37289 39394 . + . ID=gene-LDO49_RS20210;Name=LDO49_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20210;old_locus_tag=BCEP4_290034 NZ_CAJZAV010000212.1 Protein Homology CDS 37289 39394 . + 0 ID=cds-WP_224052260.1;Parent=gene-LDO49_RS20210;Dbxref=GenBank:WP_224052260.1;Name=WP_224052260.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758840.1;locus_tag=LDO49_RS20210;product=TonB-dependent siderophore receptor;protein_id=WP_224052260.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 39431 40684 . - . ID=gene-LDO49_RS20215;Name=LDO49_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20215;old_locus_tag=BCEP4_290035 NZ_CAJZAV010000212.1 Protein Homology CDS 39431 40684 . - 0 ID=cds-WP_059485517.1;Parent=gene-LDO49_RS20215;Dbxref=GenBank:WP_059485517.1;Name=WP_059485517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010096651.1;locus_tag=LDO49_RS20215;product=arsenic transporter;protein_id=WP_059485517.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 40722 41987 . - . ID=gene-LDO49_RS20220;Name=LDO49_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20220;old_locus_tag=BCEP4_290036 NZ_CAJZAV010000212.1 Protein Homology CDS 40722 41987 . - 0 ID=cds-WP_060220920.1;Parent=gene-LDO49_RS20220;Dbxref=GenBank:WP_060220920.1;Name=WP_060220920.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878089.1;locus_tag=LDO49_RS20220;product=MFS transporter;protein_id=WP_060220920.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 42001 42546 . - . ID=gene-LDO49_RS20225;Name=LDO49_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20225;old_locus_tag=BCEP4_290037 NZ_CAJZAV010000212.1 Protein Homology CDS 42001 42546 . - 0 ID=cds-WP_059485516.1;Parent=gene-LDO49_RS20225;Dbxref=GenBank:WP_059485516.1;Name=WP_059485516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549890.1;locus_tag=LDO49_RS20225;product=hypothetical protein;protein_id=WP_059485516.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 42587 43357 . - . ID=gene-LDO49_RS20230;Name=LDO49_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20230;old_locus_tag=BCEP4_290038 NZ_CAJZAV010000212.1 Protein Homology CDS 42587 43357 . - 0 ID=cds-WP_059855913.1;Parent=gene-LDO49_RS20230;Dbxref=GenBank:WP_059855913.1;Name=WP_059855913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336843.1;locus_tag=LDO49_RS20230;product=hypothetical protein;protein_id=WP_059855913.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 43526 44911 . - . ID=gene-LDO49_RS20235;Name=LDO49_RS20235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20235;old_locus_tag=BCEP4_290039 NZ_CAJZAV010000212.1 Protein Homology CDS 43526 44911 . - 0 ID=cds-WP_224052261.1;Parent=gene-LDO49_RS20235;Dbxref=GenBank:WP_224052261.1;Name=WP_224052261.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336844.1;locus_tag=LDO49_RS20235;product=sigma-54-dependent transcriptional regulator;protein_id=WP_224052261.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 44893 46392 . - . ID=gene-LDO49_RS20240;Name=LDO49_RS20240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20240;old_locus_tag=BCEP4_290040 NZ_CAJZAV010000212.1 Protein Homology CDS 44893 46392 . - 0 ID=cds-WP_224052262.1;Parent=gene-LDO49_RS20240;Dbxref=GenBank:WP_224052262.1;Name=WP_224052262.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092353.1;locus_tag=LDO49_RS20240;product=sensor histidine kinase;protein_id=WP_224052262.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 46586 47542 . + . ID=gene-LDO49_RS20245;Name=LDO49_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20245;old_locus_tag=BCEP4_290041 NZ_CAJZAV010000212.1 Protein Homology CDS 46586 47542 . + 0 ID=cds-WP_224052263.1;Parent=gene-LDO49_RS20245;Dbxref=GenBank:WP_224052263.1;Name=WP_224052263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012436758.1;locus_tag=LDO49_RS20245;product=mannuronate-specific alginate lyase;protein_id=WP_224052263.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 47722 48051 . - . ID=gene-LDO49_RS20250;Name=LDO49_RS20250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20250;old_locus_tag=BCEP4_290042 NZ_CAJZAV010000212.1 Protein Homology CDS 47722 48051 . - 0 ID=cds-WP_021163235.1;Parent=gene-LDO49_RS20250;Dbxref=GenBank:WP_021163235.1;Name=WP_021163235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483278.1;locus_tag=LDO49_RS20250;product=hypothetical protein;protein_id=WP_021163235.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 48090 49325 . - . ID=gene-LDO49_RS20255;Name=LDO49_RS20255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20255;old_locus_tag=BCEP4_290043 NZ_CAJZAV010000212.1 Protein Homology CDS 48090 49325 . - 0 ID=cds-WP_059686195.1;Parent=gene-LDO49_RS20255;Dbxref=GenBank:WP_059686195.1;Name=WP_059686195.1;Ontology_term=GO:0008643,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757042.1;locus_tag=LDO49_RS20255;product=sugar ABC transporter permease;protein_id=WP_059686195.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 49322 50881 . - . ID=gene-LDO49_RS20260;Name=xylG;gbkey=Gene;gene=xylG;gene_biotype=protein_coding;locus_tag=LDO49_RS20260;old_locus_tag=BCEP4_290044 NZ_CAJZAV010000212.1 Protein Homology CDS 49322 50881 . - 0 ID=cds-WP_059855923.1;Parent=gene-LDO49_RS20260;Dbxref=GenBank:WP_059855923.1;Name=WP_059855923.1;Ontology_term=GO:0015753,GO:0005524,GO:0015614,GO:0016020;gbkey=CDS;gene=xylG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-xylose transporter activity|0015614||IEA;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335463.1;locus_tag=LDO49_RS20260;product=D-xylose ABC transporter ATP-binding protein;protein_id=WP_059855923.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 50942 51970 . - . ID=gene-LDO49_RS20265;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=LDO49_RS20265;old_locus_tag=BCEP4_290045 NZ_CAJZAV010000212.1 Protein Homology CDS 50942 51970 . - 0 ID=cds-WP_060147597.1;Parent=gene-LDO49_RS20265;Dbxref=GenBank:WP_060147597.1;Name=WP_060147597.1;Ontology_term=GO:0015753,GO:0015614,GO:0033222,GO:0055052;gbkey=CDS;gene=xylF;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type D-xylose transporter activity|0015614||IEA,xylose binding|0033222||IEA;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011490741.1;locus_tag=LDO49_RS20265;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_060147597.1;transl_table=11 NZ_CAJZAV010000212.1 RefSeq gene 52075 53284 . - . ID=gene-LDO49_RS20270;Name=xylB;end_range=53284,.;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=LDO49_RS20270;old_locus_tag=BCEP4_290046;partial=true NZ_CAJZAV010000212.1 Protein Homology CDS 52075 53284 . - 1 ID=cds-WP_224052264.1;Parent=gene-LDO49_RS20270;Dbxref=GenBank:WP_224052264.1;Name=WP_224052264.1;Ontology_term=GO:0005997,GO:0004856;end_range=53284,.;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397034.1;locus_tag=LDO49_RS20270;partial=true;product=xylulokinase;protein_id=WP_224052264.1;transl_table=11 ##sequence-region NZ_CAJZAV010000213.1 1 1113 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000213.1 RefSeq region 1 1113 . + . ID=NZ_CAJZAV010000213.1:1..1113;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_290 NZ_CAJZAV010000213.1 RefSeq gene 1 708 . - . ID=gene-LDO49_RS20275;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=LDO49_RS20275;partial=true;start_range=.,1 NZ_CAJZAV010000213.1 Protein Homology CDS 1 708 . - 0 ID=cds-WP_224052265.1;Parent=gene-LDO49_RS20275;Dbxref=GenBank:WP_224052265.1;Name=WP_224052265.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329091.1;locus_tag=LDO49_RS20275;partial=true;product=exodeoxyribonuclease VII large subunit;protein_id=WP_224052265.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAV010000214.1 1 3726 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000214.1 RefSeq region 1 3726 . + . ID=NZ_CAJZAV010000214.1:1..3726;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_291 NZ_CAJZAV010000214.1 RefSeq gene 1 956 . - . ID=gene-LDO49_RS20280;Name=LDO49_RS20280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20280;partial=true;start_range=.,1 NZ_CAJZAV010000214.1 Protein Homology CDS 1 956 . - 0 ID=cds-WP_224052266.1;Parent=gene-LDO49_RS20280;Dbxref=GenBank:WP_224052266.1;Name=WP_224052266.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349546.1;locus_tag=LDO49_RS20280;partial=true;product=FUSC family protein;protein_id=WP_224052266.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000214.1 RefSeq gene 1057 1980 . - . ID=gene-LDO49_RS20285;Name=LDO49_RS20285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20285;old_locus_tag=BCEP4_2910003 NZ_CAJZAV010000214.1 Protein Homology CDS 1057 1980 . - 0 ID=cds-WP_048028682.1;Parent=gene-LDO49_RS20285;Dbxref=GenBank:WP_048028682.1;Name=WP_048028682.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349547.1;locus_tag=LDO49_RS20285;product=LysR family transcriptional regulator;protein_id=WP_048028682.1;transl_table=11 NZ_CAJZAV010000214.1 RefSeq gene 2181 2705 . - . ID=gene-LDO49_RS20290;Name=LDO49_RS20290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20290;old_locus_tag=BCEP4_2910004 NZ_CAJZAV010000214.1 Protein Homology CDS 2181 2705 . - 0 ID=cds-WP_021164278.1;Parent=gene-LDO49_RS20290;Dbxref=GenBank:WP_021164278.1;Name=WP_021164278.1;Ontology_term=GO:0010181,GO:0016491,GO:0016646;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors%2C NAD or NADP as acceptor|0016646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349548.1;locus_tag=LDO49_RS20290;product=flavin reductase family protein;protein_id=WP_021164278.1;transl_table=11 NZ_CAJZAV010000214.1 RefSeq gene 2772 3726 . - . ID=gene-LDO49_RS20295;Name=LDO49_RS20295;end_range=3726,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20295;old_locus_tag=BCEP4_2910005;partial=true NZ_CAJZAV010000214.1 Protein Homology CDS 2772 3726 . - 1 ID=cds-WP_224052267.1;Parent=gene-LDO49_RS20295;Dbxref=GenBank:WP_224052267.1;Name=WP_224052267.1;Ontology_term=GO:0071949;end_range=3726,.;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010121768.1;locus_tag=LDO49_RS20295;partial=true;product=FAD-dependent monooxygenase;protein_id=WP_224052267.1;transl_table=11 ##sequence-region NZ_CAJZAV010000215.1 1 1977 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000215.1 RefSeq region 1 1977 . + . ID=NZ_CAJZAV010000215.1:1..1977;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_292 NZ_CAJZAV010000215.1 RefSeq pseudogene 1 327 . - . ID=gene-LDO49_RS20300;Name=LDO49_RS20300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS20300;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000215.1 Protein Homology CDS 1 327 . - 0 ID=cds-LDO49_RS20300;Parent=gene-LDO49_RS20300;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338270.1;locus_tag=LDO49_RS20300;partial=true;product=cytochrome c;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000215.1 RefSeq gene 378 1205 . - . ID=gene-LDO49_RS20305;Name=LDO49_RS20305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20305;old_locus_tag=BCEP4_2920002 NZ_CAJZAV010000215.1 Protein Homology CDS 378 1205 . - 0 ID=cds-WP_069254465.1;Parent=gene-LDO49_RS20305;Dbxref=GenBank:WP_069254465.1;Name=WP_069254465.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488658.1;locus_tag=LDO49_RS20305;product=ABC transporter ATP-binding protein;protein_id=WP_069254465.1;transl_table=11 NZ_CAJZAV010000215.1 RefSeq gene 1199 1977 . - . ID=gene-LDO49_RS20310;Name=LDO49_RS20310;end_range=1977,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20310;old_locus_tag=BCEP4_2920003;partial=true NZ_CAJZAV010000215.1 Protein Homology CDS 1199 1977 . - 2 ID=cds-WP_224052268.1;Parent=gene-LDO49_RS20310;Dbxref=GenBank:WP_224052268.1;Name=WP_224052268.1;Ontology_term=GO:0005524,GO:0022857;end_range=1977,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403658.1;locus_tag=LDO49_RS20310;partial=true;product=ABC transporter permease;protein_id=WP_224052268.1;transl_table=11 ##sequence-region NZ_CAJZAV010000216.1 1 848 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000216.1 RefSeq region 1 848 . + . ID=NZ_CAJZAV010000216.1:1..848;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_293 NZ_CAJZAV010000216.1 RefSeq pseudogene 1 708 . + . ID=gene-LDO49_RS20315;Name=LDO49_RS20315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS20315;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000216.1 Protein Homology CDS 1 708 . + 0 ID=cds-LDO49_RS20315;Parent=gene-LDO49_RS20315;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331435.1;locus_tag=LDO49_RS20315;partial=true;product=type VI secretion system tip protein VgrG;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAV010000217.1 1 761 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000217.1 RefSeq region 1 761 . + . ID=NZ_CAJZAV010000217.1:1..761;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_294 NZ_CAJZAV010000217.1 RefSeq gene 69 591 . - . ID=gene-LDO49_RS20320;Name=LDO49_RS20320;end_range=591,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20320;old_locus_tag=BCEP4_2940001;partial=true NZ_CAJZAV010000217.1 Protein Homology CDS 69 591 . - 1 ID=cds-WP_443797993.1;Parent=gene-LDO49_RS20320;Dbxref=GenBank:WP_443797993.1;Name=WP_443797993.1;Ontology_term=GO:0030244,GO:0019867;end_range=591,.;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545163.1;locus_tag=LDO49_RS20320;partial=true;product=cellulose synthase subunit BcsC-related outer membrane protein;protein_id=WP_443797993.1;transl_table=11 NZ_CAJZAV010000217.1 RefSeq gene 602 761 . - . ID=gene-LDO49_RS38265;Name=LDO49_RS38265;end_range=761,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38265;partial=true;start_range=.,602 NZ_CAJZAV010000217.1 Protein Homology CDS 602 761 . - 1 ID=cds-WP_443797994.1;Parent=gene-LDO49_RS38265;Dbxref=GenBank:WP_443797994.1;Name=WP_443797994.1;Ontology_term=GO:0030244,GO:0019867;end_range=761,.;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545163.1;locus_tag=LDO49_RS38265;partial=true;product=cellulose synthase subunit BcsC-related outer membrane protein;protein_id=WP_443797994.1;start_range=.,602;transl_table=11 ##sequence-region NZ_CAJZAV010000218.1 1 794 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000218.1 RefSeq region 1 794 . + . ID=NZ_CAJZAV010000218.1:1..794;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_295 NZ_CAJZAV010000218.1 RefSeq gene 1 208 . - . ID=gene-LDO49_RS20325;Name=LDO49_RS20325;end_range=208,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20325;partial=true;start_range=.,1 NZ_CAJZAV010000218.1 Protein Homology CDS 1 208 . - 2 ID=cds-WP_253074686.1;Parent=gene-LDO49_RS20325;Dbxref=GenBank:WP_253074686.1;Name=WP_253074686.1;Ontology_term=GO:0005975,GO:0016301;end_range=208,.;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546089.1;locus_tag=LDO49_RS20325;partial=true;product=FGGY family carbohydrate kinase;protein_id=WP_253074686.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000218.1 RefSeq gene 219 580 . + . ID=gene-LDO49_RS38270;Name=LDO49_RS38270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38270;partial=true;start_range=.,219 NZ_CAJZAV010000218.1 GeneMarkS-2+ CDS 219 580 . + 2 ID=cds-WP_443797995.1;Parent=gene-LDO49_RS38270;Dbxref=GenBank:WP_443797995.1;Name=WP_443797995.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS38270;partial=true;product=hypothetical protein;protein_id=WP_443797995.1;start_range=.,219;transl_table=11 NZ_CAJZAV010000218.1 RefSeq gene 586 794 . + . ID=gene-LDO49_RS20330;Name=LDO49_RS20330;end_range=794,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20330;partial=true NZ_CAJZAV010000218.1 Protein Homology CDS 586 794 . + 0 ID=cds-WP_290369871.1;Parent=gene-LDO49_RS20330;Dbxref=GenBank:WP_290369871.1;Name=WP_290369871.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=794,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530867.1;locus_tag=LDO49_RS20330;partial=true;product=solute carrier family 23 protein;protein_id=WP_290369871.1;transl_table=11 ##sequence-region NZ_CAJZAV010000219.1 1 4410 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000219.1 RefSeq region 1 4410 . + . ID=NZ_CAJZAV010000219.1:1..4410;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_296 NZ_CAJZAV010000219.1 RefSeq gene 93 815 . + . ID=gene-LDO49_RS20335;Name=LDO49_RS20335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20335;old_locus_tag=BCEP4_2960001 NZ_CAJZAV010000219.1 Protein Homology CDS 93 815 . + 0 ID=cds-WP_224052269.1;Parent=gene-LDO49_RS20335;Dbxref=GenBank:WP_224052269.1;Name=WP_224052269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547343.1;locus_tag=LDO49_RS20335;product=dihydrodipicolinate reductase;protein_id=WP_224052269.1;transl_table=11 NZ_CAJZAV010000219.1 RefSeq gene 1091 1573 . + . ID=gene-LDO49_RS20340;Name=LDO49_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20340;old_locus_tag=BCEP4_2960002 NZ_CAJZAV010000219.1 Protein Homology CDS 1091 1573 . + 0 ID=cds-WP_021158171.1;Parent=gene-LDO49_RS20340;Dbxref=GenBank:WP_021158171.1;Name=WP_021158171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018423524.1;locus_tag=LDO49_RS20340;product=cupin domain-containing protein;protein_id=WP_021158171.1;transl_table=11 NZ_CAJZAV010000219.1 RefSeq gene 1677 2486 . - . ID=gene-LDO49_RS20345;Name=LDO49_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20345;old_locus_tag=BCEP4_2960003 NZ_CAJZAV010000219.1 Protein Homology CDS 1677 2486 . - 0 ID=cds-WP_224052270.1;Parent=gene-LDO49_RS20345;Dbxref=GenBank:WP_224052270.1;Name=WP_224052270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354510.1;locus_tag=LDO49_RS20345;product=SDR family oxidoreductase;protein_id=WP_224052270.1;transl_table=11 NZ_CAJZAV010000219.1 RefSeq gene 2483 3316 . - . ID=gene-LDO49_RS20350;Name=LDO49_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20350;old_locus_tag=BCEP4_2960004 NZ_CAJZAV010000219.1 Protein Homology CDS 2483 3316 . - 0 ID=cds-WP_224052272.1;Parent=gene-LDO49_RS20350;Dbxref=GenBank:WP_224052272.1;Name=WP_224052272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547341.1;locus_tag=LDO49_RS20350;product=MoaF C-terminal domain-containing protein;protein_id=WP_224052272.1;transl_table=11 NZ_CAJZAV010000219.1 RefSeq gene 3487 4281 . + . ID=gene-LDO49_RS20355;Name=LDO49_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20355;old_locus_tag=BCEP4_2960005 NZ_CAJZAV010000219.1 Protein Homology CDS 3487 4281 . + 0 ID=cds-WP_224052271.1;Parent=gene-LDO49_RS20355;Dbxref=GenBank:WP_224052271.1;Name=WP_224052271.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758098.1;locus_tag=LDO49_RS20355;product=AraC family transcriptional regulator;protein_id=WP_224052271.1;transl_table=11 ##sequence-region NZ_CAJZAV010000220.1 1 3586 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000220.1 RefSeq region 1 3586 . + . ID=NZ_CAJZAV010000220.1:1..3586;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_297 NZ_CAJZAV010000220.1 RefSeq gene 1 686 . - . ID=gene-LDO49_RS20360;Name=LDO49_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20360;partial=true;start_range=.,1 NZ_CAJZAV010000220.1 Protein Homology CDS 1 686 . - 0 ID=cds-WP_224052273.1;Parent=gene-LDO49_RS20360;Dbxref=GenBank:WP_224052273.1;Name=WP_224052273.1;Ontology_term=GO:0019441,GO:0004061;gbkey=CDS;go_function=arylformamidase activity|0004061||IEA;go_process=L-tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330746.1;locus_tag=LDO49_RS20360;partial=true;product=cyclase family protein;protein_id=WP_224052273.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000220.1 RefSeq gene 760 2040 . - . ID=gene-LDO49_RS20365;Name=LDO49_RS20365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20365;old_locus_tag=BCEP4_2970002 NZ_CAJZAV010000220.1 Protein Homology CDS 760 2040 . - 0 ID=cds-WP_224052274.1;Parent=gene-LDO49_RS20365;Dbxref=GenBank:WP_224052274.1;Name=WP_224052274.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090168.1;locus_tag=LDO49_RS20365;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_224052274.1;transl_table=11 NZ_CAJZAV010000220.1 RefSeq gene 2121 2885 . - . ID=gene-LDO49_RS20370;Name=LDO49_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20370;old_locus_tag=BCEP4_2970003 NZ_CAJZAV010000220.1 Protein Homology CDS 2121 2885 . - 0 ID=cds-WP_224052275.1;Parent=gene-LDO49_RS20370;Dbxref=GenBank:WP_224052275.1;Name=WP_224052275.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760364.1;locus_tag=LDO49_RS20370;product=IclR family transcriptional regulator;protein_id=WP_224052275.1;transl_table=11 NZ_CAJZAV010000220.1 RefSeq gene 3128 3586 . + . ID=gene-LDO49_RS20375;Name=LDO49_RS20375;end_range=3586,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20375;partial=true NZ_CAJZAV010000220.1 Protein Homology CDS 3128 3586 . + 0 ID=cds-WP_253074687.1;Parent=gene-LDO49_RS20375;Dbxref=GenBank:WP_253074687.1;Name=WP_253074687.1;Ontology_term=GO:0003824;end_range=3586,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330749.1;locus_tag=LDO49_RS20375;partial=true;product=aldolase/citrate lyase family protein;protein_id=WP_253074687.1;transl_table=11 ##sequence-region NZ_CAJZAV010000221.1 1 2830 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000221.1 RefSeq region 1 2830 . + . ID=NZ_CAJZAV010000221.1:1..2830;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_298 NZ_CAJZAV010000221.1 RefSeq gene 1 1254 . - . ID=gene-LDO49_RS20380;Name=LDO49_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20380;partial=true;start_range=.,1 NZ_CAJZAV010000221.1 Protein Homology CDS 1 1254 . - 0 ID=cds-WP_372585858.1;Parent=gene-LDO49_RS20380;Dbxref=GenBank:WP_372585858.1;Name=WP_372585858.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355161.1;locus_tag=LDO49_RS20380;partial=true;product=SWIM zinc finger family protein;protein_id=WP_372585858.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000221.1 RefSeq gene 1251 2375 . - . ID=gene-LDO49_RS20385;Name=LDO49_RS20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20385;old_locus_tag=BCEP4_2980002 NZ_CAJZAV010000221.1 Protein Homology CDS 1251 2375 . - 0 ID=cds-WP_021158780.1;Parent=gene-LDO49_RS20385;Dbxref=GenBank:WP_021158780.1;Name=WP_021158780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007836757.1;locus_tag=LDO49_RS20385;product=vWA domain-containing protein;protein_id=WP_021158780.1;transl_table=11 NZ_CAJZAV010000221.1 RefSeq gene 2476 2830 . - . ID=gene-LDO49_RS20390;Name=LDO49_RS20390;end_range=2830,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20390;old_locus_tag=BCEP4_2980003;partial=true NZ_CAJZAV010000221.1 Protein Homology CDS 2476 2830 . - 1 ID=cds-WP_224052276.1;Parent=gene-LDO49_RS20390;Dbxref=GenBank:WP_224052276.1;Name=WP_224052276.1;end_range=2830,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355159.1;locus_tag=LDO49_RS20390;partial=true;product=DUF5682 family protein;protein_id=WP_224052276.1;transl_table=11 ##sequence-region NZ_CAJZAV010000222.1 1 1173 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000222.1 RefSeq region 1 1173 . + . ID=NZ_CAJZAV010000222.1:1..1173;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_299 NZ_CAJZAV010000222.1 RefSeq gene 1 279 . + . ID=gene-LDO49_RS20395;Name=LDO49_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20395;old_locus_tag=BCEP4_2990001;partial=true;start_range=.,1 NZ_CAJZAV010000222.1 Protein Homology CDS 1 279 . + 0 ID=cds-WP_372585859.1;Parent=gene-LDO49_RS20395;Dbxref=GenBank:WP_372585859.1;Name=WP_372585859.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545413.1;locus_tag=LDO49_RS20395;partial=true;product=SAM-dependent methyltransferase;protein_id=WP_372585859.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000222.1 RefSeq gene 280 426 . - . ID=gene-LDO49_RS20400;Name=LDO49_RS20400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20400;old_locus_tag=BCEP4_2990002 NZ_CAJZAV010000222.1 GeneMarkS-2+ CDS 280 426 . - 0 ID=cds-WP_155634178.1;Parent=gene-LDO49_RS20400;Dbxref=GenBank:WP_155634178.1;Name=WP_155634178.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS20400;product=hypothetical protein;protein_id=WP_155634178.1;transl_table=11 NZ_CAJZAV010000222.1 RefSeq pseudogene 552 935 . + . ID=gene-LDO49_RS38275;Name=LDO49_RS38275;end_range=935,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38275;old_locus_tag=BCEP4_2990004;partial=true;pseudo=true NZ_CAJZAV010000222.1 Protein Homology CDS 552 935 . + 0 ID=cds-LDO49_RS38275;Parent=gene-LDO49_RS38275;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=935,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884861.1;locus_tag=LDO49_RS38275;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAV010000222.1 RefSeq pseudogene 946 1173 . + . ID=gene-LDO49_RS38280;Name=LDO49_RS38280;end_range=1173,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38280;partial=true;pseudo=true;start_range=.,946 NZ_CAJZAV010000222.1 Protein Homology CDS 946 1173 . + 1 ID=cds-LDO49_RS38280;Parent=gene-LDO49_RS38280;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1173,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884861.1;locus_tag=LDO49_RS38280;partial=true;product=hypothetical protein;pseudo=true;start_range=.,946;transl_table=11 ##sequence-region NZ_CAJZAV010000223.1 1 34990 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000223.1 RefSeq region 1 34990 . + . ID=NZ_CAJZAV010000223.1:1..34990;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_3 NZ_CAJZAV010000223.1 RefSeq gene 1 945 . - . ID=gene-LDO49_RS20405;Name=LDO49_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20405;partial=true;start_range=.,1 NZ_CAJZAV010000223.1 Protein Homology CDS 1 945 . - 0 ID=cds-WP_224052277.1;Parent=gene-LDO49_RS20405;Dbxref=GenBank:WP_224052277.1;Name=WP_224052277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354616.1;locus_tag=LDO49_RS20405;partial=true;product=transketolase-like TK C-terminal-containing protein;protein_id=WP_224052277.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 1050 1697 . + . ID=gene-LDO49_RS20410;Name=LDO49_RS20410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20410;old_locus_tag=BCEP4_30002 NZ_CAJZAV010000223.1 Protein Homology CDS 1050 1697 . + 0 ID=cds-WP_021162279.1;Parent=gene-LDO49_RS20410;Dbxref=GenBank:WP_021162279.1;Name=WP_021162279.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486025.1;locus_tag=LDO49_RS20410;product=glutathione S-transferase family protein;protein_id=WP_021162279.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 1900 3417 . + . ID=gene-LDO49_RS20415;Name=LDO49_RS20415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20415;old_locus_tag=BCEP4_30003 NZ_CAJZAV010000223.1 Protein Homology CDS 1900 3417 . + 0 ID=cds-WP_021162280.1;Parent=gene-LDO49_RS20415;Dbxref=GenBank:WP_021162280.1;Name=WP_021162280.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486042.1;locus_tag=LDO49_RS20415;product=purine-cytosine permease family protein;protein_id=WP_021162280.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 3575 4330 . - . ID=gene-LDO49_RS20420;Name=LDO49_RS20420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20420;old_locus_tag=BCEP4_30004 NZ_CAJZAV010000223.1 Protein Homology CDS 3575 4330 . - 0 ID=cds-WP_021162281.1;Parent=gene-LDO49_RS20420;Dbxref=GenBank:WP_021162281.1;Name=WP_021162281.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366344.1;locus_tag=LDO49_RS20420;product=glucose 1-dehydrogenase;protein_id=WP_021162281.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 4372 4908 . - . ID=gene-LDO49_RS20425;Name=LDO49_RS20425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20425;old_locus_tag=BCEP4_30005 NZ_CAJZAV010000223.1 Protein Homology CDS 4372 4908 . - 0 ID=cds-WP_042976909.1;Parent=gene-LDO49_RS20425;Dbxref=GenBank:WP_042976909.1;Name=WP_042976909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898893.1;locus_tag=LDO49_RS20425;product=VOC family protein;protein_id=WP_042976909.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 5104 6021 . - . ID=gene-LDO49_RS20430;Name=LDO49_RS20430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20430;old_locus_tag=BCEP4_30006 NZ_CAJZAV010000223.1 Protein Homology CDS 5104 6021 . - 0 ID=cds-WP_060055136.1;Parent=gene-LDO49_RS20430;Dbxref=GenBank:WP_060055136.1;Name=WP_060055136.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898894.1;locus_tag=LDO49_RS20430;product=LysR family transcriptional regulator;protein_id=WP_060055136.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 6345 7661 . + . ID=gene-LDO49_RS20435;Name=LDO49_RS20435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20435;old_locus_tag=BCEP4_30007 NZ_CAJZAV010000223.1 Protein Homology CDS 6345 7661 . + 0 ID=cds-WP_224052278.1;Parent=gene-LDO49_RS20435;Dbxref=GenBank:WP_224052278.1;Name=WP_224052278.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354622.1;locus_tag=LDO49_RS20435;product=MFS transporter;protein_id=WP_224052278.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 7864 8634 . + . ID=gene-LDO49_RS20440;Name=LDO49_RS20440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20440;old_locus_tag=BCEP4_30008 NZ_CAJZAV010000223.1 GeneMarkS-2+ CDS 7864 8634 . + 0 ID=cds-WP_224052279.1;Parent=gene-LDO49_RS20440;Dbxref=GenBank:WP_224052279.1;Name=WP_224052279.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS20440;product=hypothetical protein;protein_id=WP_224052279.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 8835 10085 . + . ID=gene-LDO49_RS20445;Name=LDO49_RS20445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20445;old_locus_tag=BCEP4_30010 NZ_CAJZAV010000223.1 Protein Homology CDS 8835 10085 . + 0 ID=cds-WP_224052280.1;Parent=gene-LDO49_RS20445;Dbxref=GenBank:WP_224052280.1;Name=WP_224052280.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898896.1;locus_tag=LDO49_RS20445;product=MFS transporter;protein_id=WP_224052280.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 10259 10870 . + . ID=gene-LDO49_RS20450;Name=LDO49_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20450;old_locus_tag=BCEP4_30009 NZ_CAJZAV010000223.1 Protein Homology CDS 10259 10870 . + 0 ID=cds-WP_027789412.1;Parent=gene-LDO49_RS20450;Dbxref=GenBank:WP_027789412.1;Name=WP_027789412.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216769.1;locus_tag=LDO49_RS20450;product=cysteine hydrolase family protein;protein_id=WP_027789412.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 10890 12515 . - . ID=gene-LDO49_RS20455;Name=LDO49_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20455;old_locus_tag=BCEP4_30011 NZ_CAJZAV010000223.1 Protein Homology CDS 10890 12515 . - 0 ID=cds-WP_059813677.1;Parent=gene-LDO49_RS20455;Dbxref=GenBank:WP_059813677.1;Name=WP_059813677.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486024.1;locus_tag=LDO49_RS20455;product=amidohydrolase;protein_id=WP_059813677.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 12940 13755 . - . ID=gene-LDO49_RS20460;Name=LDO49_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20460;old_locus_tag=BCEP4_30012 NZ_CAJZAV010000223.1 Protein Homology CDS 12940 13755 . - 0 ID=cds-WP_059484767.1;Parent=gene-LDO49_RS20460;Dbxref=GenBank:WP_059484767.1;Name=WP_059484767.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354626.1;locus_tag=LDO49_RS20460;product=helix-turn-helix transcriptional regulator;protein_id=WP_059484767.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 13990 14466 . - . ID=gene-LDO49_RS20465;Name=LDO49_RS20465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20465;old_locus_tag=BCEP4_30013 NZ_CAJZAV010000223.1 Protein Homology CDS 13990 14466 . - 0 ID=cds-WP_060074762.1;Parent=gene-LDO49_RS20465;Dbxref=GenBank:WP_060074762.1;Name=WP_060074762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898900.1;locus_tag=LDO49_RS20465;product=nuclear transport factor 2 family protein;protein_id=WP_060074762.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 14788 15174 . + . ID=gene-LDO49_RS20470;Name=LDO49_RS20470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20470;old_locus_tag=BCEP4_30014 NZ_CAJZAV010000223.1 Protein Homology CDS 14788 15174 . + 0 ID=cds-WP_059497072.1;Parent=gene-LDO49_RS20470;Dbxref=GenBank:WP_059497072.1;Name=WP_059497072.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496910.1;locus_tag=LDO49_RS20470;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_059497072.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 15668 16051 . - . ID=gene-LDO49_RS20475;Name=LDO49_RS20475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20475;old_locus_tag=BCEP4_30015 NZ_CAJZAV010000223.1 Protein Homology CDS 15668 16051 . - 0 ID=cds-WP_081067392.1;Parent=gene-LDO49_RS20475;Dbxref=GenBank:WP_081067392.1;Name=WP_081067392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412760.1;locus_tag=LDO49_RS20475;product=YXWGXW repeat-containing protein;protein_id=WP_081067392.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 16664 17749 . + . ID=gene-LDO49_RS20480;Name=LDO49_RS20480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20480;old_locus_tag=BCEP4_30017 NZ_CAJZAV010000223.1 Protein Homology CDS 16664 17749 . + 0 ID=cds-WP_059497071.1;Parent=gene-LDO49_RS20480;Dbxref=GenBank:WP_059497071.1;Name=WP_059497071.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354630.1;locus_tag=LDO49_RS20480;product=porin;protein_id=WP_059497071.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 17925 18323 . - . ID=gene-LDO49_RS20485;Name=LDO49_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20485;old_locus_tag=BCEP4_30018 NZ_CAJZAV010000223.1 Protein Homology CDS 17925 18323 . - 0 ID=cds-WP_021162294.1;Parent=gene-LDO49_RS20485;Dbxref=GenBank:WP_021162294.1;Name=WP_021162294.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761842.1;locus_tag=LDO49_RS20485;product=GreA/GreB family elongation factor;protein_id=WP_021162294.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 18836 19165 . + . ID=gene-LDO49_RS20490;Name=LDO49_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20490;old_locus_tag=BCEP4_30020 NZ_CAJZAV010000223.1 Protein Homology CDS 18836 19165 . + 0 ID=cds-WP_060074761.1;Parent=gene-LDO49_RS20490;Dbxref=GenBank:WP_060074761.1;Name=WP_060074761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496913.1;locus_tag=LDO49_RS20490;product=DUF4148 domain-containing protein;protein_id=WP_060074761.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 19320 19781 . - . ID=gene-LDO49_RS20495;Name=LDO49_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20495;old_locus_tag=BCEP4_30021 NZ_CAJZAV010000223.1 Protein Homology CDS 19320 19781 . - 0 ID=cds-WP_021162297.1;Parent=gene-LDO49_RS20495;Dbxref=GenBank:WP_021162297.1;Name=WP_021162297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486040.1;locus_tag=LDO49_RS20495;product=CBS domain-containing protein;protein_id=WP_021162297.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 19959 20609 . + . ID=gene-LDO49_RS20500;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=LDO49_RS20500;old_locus_tag=BCEP4_30022 NZ_CAJZAV010000223.1 Protein Homology CDS 19959 20609 . + 0 ID=cds-WP_059484771.1;Parent=gene-LDO49_RS20500;Dbxref=GenBank:WP_059484771.1;Name=WP_059484771.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195483.1;locus_tag=LDO49_RS20500;product=GTP cyclohydrolase II;protein_id=WP_059484771.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq pseudogene 20831 20989 . + . ID=gene-LDO49_RS20505;Name=LDO49_RS20505;end_range=20989,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS20505;old_locus_tag=BCEP4_30023;partial=true;pseudo=true NZ_CAJZAV010000223.1 Protein Homology CDS 20831 20989 . + 0 ID=cds-LDO49_RS20505;Parent=gene-LDO49_RS20505;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=20989,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339748.1;locus_tag=LDO49_RS20505;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 21150 21845 . - . ID=gene-LDO49_RS20510;Name=LDO49_RS20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20510;old_locus_tag=BCEP4_30024 NZ_CAJZAV010000223.1 GeneMarkS-2+ CDS 21150 21845 . - 0 ID=cds-WP_060074760.1;Parent=gene-LDO49_RS20510;Dbxref=GenBank:WP_060074760.1;Name=WP_060074760.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS20510;product=ArsR/SmtB family transcription factor;protein_id=WP_060074760.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 22007 22381 . + . ID=gene-LDO49_RS20515;Name=LDO49_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20515;old_locus_tag=BCEP4_30025 NZ_CAJZAV010000223.1 Protein Homology CDS 22007 22381 . + 0 ID=cds-WP_048022671.1;Parent=gene-LDO49_RS20515;Dbxref=GenBank:WP_048022671.1;Name=WP_048022671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521805.1;locus_tag=LDO49_RS20515;product=nuclear transport factor 2 family protein;protein_id=WP_048022671.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 22645 23232 . + . ID=gene-LDO49_RS20520;Name=LDO49_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20520;old_locus_tag=BCEP4_30026 NZ_CAJZAV010000223.1 Protein Homology CDS 22645 23232 . + 0 ID=cds-WP_048022670.1;Parent=gene-LDO49_RS20520;Dbxref=GenBank:WP_048022670.1;Name=WP_048022670.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423097.1;locus_tag=LDO49_RS20520;product=class I SAM-dependent methyltransferase;protein_id=WP_048022670.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 23564 23905 . + . ID=gene-LDO49_RS20525;Name=LDO49_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20525;old_locus_tag=BCEP4_30027 NZ_CAJZAV010000223.1 Protein Homology CDS 23564 23905 . + 0 ID=cds-WP_048022669.1;Parent=gene-LDO49_RS20525;Dbxref=GenBank:WP_048022669.1;Name=WP_048022669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008162942.1;locus_tag=LDO49_RS20525;product=DHCW motif cupin fold protein;protein_id=WP_048022669.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 24218 24643 . + . ID=gene-LDO49_RS20530;Name=LDO49_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20530;old_locus_tag=BCEP4_30028 NZ_CAJZAV010000223.1 GeneMarkS-2+ CDS 24218 24643 . + 0 ID=cds-WP_059497060.1;Parent=gene-LDO49_RS20530;Dbxref=GenBank:WP_059497060.1;Name=WP_059497060.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS20530;product=hypothetical protein;protein_id=WP_059497060.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 24736 25029 . + . ID=gene-LDO49_RS20535;Name=LDO49_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20535;old_locus_tag=BCEP4_30029 NZ_CAJZAV010000223.1 Protein Homology CDS 24736 25029 . + 0 ID=cds-WP_081052659.1;Parent=gene-LDO49_RS20535;Dbxref=GenBank:WP_081052659.1;Name=WP_081052659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602106.1;locus_tag=LDO49_RS20535;product=toxin-antitoxin system YwqK family antitoxin;protein_id=WP_081052659.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 25342 26499 . + . ID=gene-LDO49_RS20540;Name=LDO49_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20540;old_locus_tag=BCEP4_30031 NZ_CAJZAV010000223.1 Protein Homology CDS 25342 26499 . + 0 ID=cds-WP_060074793.1;Parent=gene-LDO49_RS20540;Dbxref=GenBank:WP_060074793.1;Name=WP_060074793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014972377.1;locus_tag=LDO49_RS20540;product=sensor histidine kinase;protein_id=WP_060074793.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 26784 27050 . + . ID=gene-LDO49_RS20545;Name=LDO49_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20545;old_locus_tag=BCEP4_30033 NZ_CAJZAV010000223.1 GeneMarkS-2+ CDS 26784 27050 . + 0 ID=cds-WP_060147739.1;Parent=gene-LDO49_RS20545;Dbxref=GenBank:WP_060147739.1;Name=WP_060147739.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS20545;product=hypothetical protein;protein_id=WP_060147739.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 27170 27730 . - . ID=gene-LDO49_RS20550;Name=LDO49_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20550;old_locus_tag=BCEP4_30034 NZ_CAJZAV010000223.1 GeneMarkS-2+ CDS 27170 27730 . - 0 ID=cds-WP_124475874.1;Parent=gene-LDO49_RS20550;Dbxref=GenBank:WP_124475874.1;Name=WP_124475874.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS20550;product=hypothetical protein;protein_id=WP_124475874.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 28112 28678 . + . ID=gene-LDO49_RS20555;Name=LDO49_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20555;old_locus_tag=BCEP4_30035 NZ_CAJZAV010000223.1 Protein Homology CDS 28112 28678 . + 0 ID=cds-WP_060074759.1;Parent=gene-LDO49_RS20555;Dbxref=GenBank:WP_060074759.1;Name=WP_060074759.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354654.1;locus_tag=LDO49_RS20555;product=GNAT family N-acetyltransferase;protein_id=WP_060074759.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 28700 29086 . - . ID=gene-LDO49_RS20560;Name=LDO49_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20560;old_locus_tag=BCEP4_30036 NZ_CAJZAV010000223.1 Protein Homology CDS 28700 29086 . - 0 ID=cds-WP_048022665.1;Parent=gene-LDO49_RS20560;Dbxref=GenBank:WP_048022665.1;Name=WP_048022665.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496915.1;locus_tag=LDO49_RS20560;product=VOC family protein;protein_id=WP_048022665.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 29344 30108 . - . ID=gene-LDO49_RS20565;Name=LDO49_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20565;old_locus_tag=BCEP4_30038 NZ_CAJZAV010000223.1 Protein Homology CDS 29344 30108 . - 0 ID=cds-WP_063807003.1;Parent=gene-LDO49_RS20565;Dbxref=GenBank:WP_063807003.1;Name=WP_063807003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483939.1;locus_tag=LDO49_RS20565;product=hypothetical protein;protein_id=WP_063807003.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 30159 30767 . - . ID=gene-LDO49_RS20570;Name=LDO49_RS20570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20570;old_locus_tag=BCEP4_30039 NZ_CAJZAV010000223.1 Protein Homology CDS 30159 30767 . - 0 ID=cds-WP_042976961.1;Parent=gene-LDO49_RS20570;Dbxref=GenBank:WP_042976961.1;Name=WP_042976961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195479.1;locus_tag=LDO49_RS20570;product=acyl-homoserine-lactone synthase;protein_id=WP_042976961.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 30978 31421 . - . ID=gene-LDO49_RS20575;Name=LDO49_RS20575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20575;old_locus_tag=BCEP4_30040 NZ_CAJZAV010000223.1 Protein Homology CDS 30978 31421 . - 0 ID=cds-WP_042976964.1;Parent=gene-LDO49_RS20575;Dbxref=GenBank:WP_042976964.1;Name=WP_042976964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603338.1;locus_tag=LDO49_RS20575;product=DUF4902 domain-containing protein;protein_id=WP_042976964.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 31495 32214 . + . ID=gene-LDO49_RS20580;Name=LDO49_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20580;old_locus_tag=BCEP4_30041 NZ_CAJZAV010000223.1 Protein Homology CDS 31495 32214 . + 0 ID=cds-WP_060074757.1;Parent=gene-LDO49_RS20580;Dbxref=GenBank:WP_060074757.1;Name=WP_060074757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409826.1;locus_tag=LDO49_RS20580;product=autoinducer binding domain-containing protein;protein_id=WP_060074757.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 32265 32972 . - . ID=gene-LDO49_RS20585;Name=LDO49_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20585;old_locus_tag=BCEP4_30042 NZ_CAJZAV010000223.1 Protein Homology CDS 32265 32972 . - 0 ID=cds-WP_021162348.1;Parent=gene-LDO49_RS20585;Dbxref=GenBank:WP_021162348.1;Name=WP_021162348.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009897347.1;locus_tag=LDO49_RS20585;product=MgtC/SapB family protein;protein_id=WP_021162348.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 33278 34822 . - . ID=gene-LDO49_RS20590;Name=LDO49_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20590;old_locus_tag=BCEP4_30043 NZ_CAJZAV010000223.1 Protein Homology CDS 33278 34822 . - 0 ID=cds-WP_124475875.1;Parent=gene-LDO49_RS20590;Dbxref=GenBank:WP_124475875.1;Name=WP_124475875.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496920.1;locus_tag=LDO49_RS20590;product=TolC family protein;protein_id=WP_124475875.1;transl_table=11 NZ_CAJZAV010000223.1 RefSeq gene 34809 34990 . - . ID=gene-LDO49_RS20595;Name=LDO49_RS20595;end_range=34990,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20595;partial=true NZ_CAJZAV010000223.1 Protein Homology CDS 34809 34990 . - 2 ID=cds-WP_224052281.1;Parent=gene-LDO49_RS20595;Dbxref=GenBank:WP_224052281.1;Name=WP_224052281.1;end_range=34990,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354662.1;locus_tag=LDO49_RS20595;partial=true;product=hypothetical protein;protein_id=WP_224052281.1;transl_table=11 ##sequence-region NZ_CAJZAV010000224.1 1 38456 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000224.1 RefSeq region 1 38456 . + . ID=NZ_CAJZAV010000224.1:1..38456;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_30 NZ_CAJZAV010000224.1 RefSeq gene 1 953 . + . ID=gene-LDO49_RS20600;Name=LDO49_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20600;old_locus_tag=BCEP4_300001;partial=true;start_range=.,1 NZ_CAJZAV010000224.1 Protein Homology CDS 1 953 . + 2 ID=cds-WP_224052282.1;Parent=gene-LDO49_RS20600;Dbxref=GenBank:WP_224052282.1;Name=WP_224052282.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495094.1;locus_tag=LDO49_RS20600;partial=true;product=ABC transporter ATP-binding protein;protein_id=WP_224052282.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 1490 2242 . + . ID=gene-LDO49_RS20605;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=LDO49_RS20605;old_locus_tag=BCEP4_300003 NZ_CAJZAV010000224.1 Protein Homology CDS 1490 2242 . + 0 ID=cds-WP_027791282.1;Parent=gene-LDO49_RS20605;Dbxref=GenBank:WP_027791282.1;Name=WP_027791282.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010097614.1;locus_tag=LDO49_RS20605;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_027791282.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 2258 2965 . + . ID=gene-LDO49_RS20610;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=LDO49_RS20610;old_locus_tag=BCEP4_300004 NZ_CAJZAV010000224.1 Protein Homology CDS 2258 2965 . + 0 ID=cds-WP_021160890.1;Parent=gene-LDO49_RS20610;Dbxref=GenBank:WP_021160890.1;Name=WP_021160890.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547981.1;locus_tag=LDO49_RS20610;product=glutamine ABC transporter permease GlnP;protein_id=WP_021160890.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 2962 3690 . + . ID=gene-LDO49_RS20615;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=LDO49_RS20615;old_locus_tag=BCEP4_300005 NZ_CAJZAV010000224.1 Protein Homology CDS 2962 3690 . + 0 ID=cds-WP_021160891.1;Parent=gene-LDO49_RS20615;Dbxref=GenBank:WP_021160891.1;Name=WP_021160891.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538020.1;locus_tag=LDO49_RS20615;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_021160891.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 3711 4760 . + . ID=gene-LDO49_RS20620;Name=LDO49_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20620;old_locus_tag=BCEP4_300006 NZ_CAJZAV010000224.1 Protein Homology CDS 3711 4760 . + 0 ID=cds-WP_224052283.1;Parent=gene-LDO49_RS20620;Dbxref=GenBank:WP_224052283.1;Name=WP_224052283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547979.1;locus_tag=LDO49_RS20620;product=C45 family autoproteolytic acyltransferase/hydolase;protein_id=WP_224052283.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 4776 6110 . + . ID=gene-LDO49_RS20625;Name=LDO49_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20625;old_locus_tag=BCEP4_300007 NZ_CAJZAV010000224.1 Protein Homology CDS 4776 6110 . + 0 ID=cds-WP_224052284.1;Parent=gene-LDO49_RS20625;Dbxref=GenBank:WP_224052284.1;Name=WP_224052284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355554.1;locus_tag=LDO49_RS20625;product=aspartate aminotransferase family protein;protein_id=WP_224052284.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 6143 6697 . + . ID=gene-LDO49_RS20630;Name=LDO49_RS20630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20630;old_locus_tag=BCEP4_300008 NZ_CAJZAV010000224.1 Protein Homology CDS 6143 6697 . + 0 ID=cds-WP_224052285.1;Parent=gene-LDO49_RS20630;Dbxref=GenBank:WP_224052285.1;Name=WP_224052285.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486233.1;locus_tag=LDO49_RS20630;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_224052285.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 6858 7634 . + . ID=gene-LDO49_RS20635;Name=LDO49_RS20635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20635;old_locus_tag=BCEP4_300009 NZ_CAJZAV010000224.1 Protein Homology CDS 6858 7634 . + 0 ID=cds-WP_224052286.1;Parent=gene-LDO49_RS20635;Dbxref=GenBank:WP_224052286.1;Name=WP_224052286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547975.1;locus_tag=LDO49_RS20635;product=extensin;protein_id=WP_224052286.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 7879 9477 . - . ID=gene-LDO49_RS20640;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=LDO49_RS20640;old_locus_tag=BCEP4_300011 NZ_CAJZAV010000224.1 Protein Homology CDS 7879 9477 . - 0 ID=cds-WP_059492406.1;Parent=gene-LDO49_RS20640;Dbxref=GenBank:WP_059492406.1;Name=WP_059492406.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403836.1;locus_tag=LDO49_RS20640;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_059492406.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 9606 10169 . - . ID=gene-LDO49_RS20645;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=LDO49_RS20645;old_locus_tag=BCEP4_300012 NZ_CAJZAV010000224.1 Protein Homology CDS 9606 10169 . - 0 ID=cds-WP_006488685.1;Parent=gene-LDO49_RS20645;Dbxref=GenBank:WP_006488685.1;Name=WP_006488685.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329783.1;locus_tag=LDO49_RS20645;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_006488685.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 10506 10871 . - . ID=gene-LDO49_RS20650;Name=LDO49_RS20650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20650;old_locus_tag=BCEP4_300013 NZ_CAJZAV010000224.1 Protein Homology CDS 10506 10871 . - 0 ID=cds-WP_021160897.1;Parent=gene-LDO49_RS20650;Dbxref=GenBank:WP_021160897.1;Name=WP_021160897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338377.1;locus_tag=LDO49_RS20650;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_021160897.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 10865 11083 . - . ID=gene-LDO49_RS20655;Name=LDO49_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20655;old_locus_tag=BCEP4_300014 NZ_CAJZAV010000224.1 Protein Homology CDS 10865 11083 . - 0 ID=cds-WP_021160898.1;Parent=gene-LDO49_RS20655;Dbxref=GenBank:WP_021160898.1;Name=WP_021160898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881946.1;locus_tag=LDO49_RS20655;product=hypothetical protein;protein_id=WP_021160898.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 11174 12070 . - . ID=gene-LDO49_RS20660;Name=LDO49_RS20660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20660;old_locus_tag=BCEP4_300015 NZ_CAJZAV010000224.1 Protein Homology CDS 11174 12070 . - 0 ID=cds-WP_048026027.1;Parent=gene-LDO49_RS20660;Dbxref=GenBank:WP_048026027.1;Name=WP_048026027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355549.1;locus_tag=LDO49_RS20660;product=LysR substrate-binding domain-containing protein;protein_id=WP_048026027.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 12248 13414 . + . ID=gene-LDO49_RS20665;Name=LDO49_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20665;old_locus_tag=BCEP4_300017 NZ_CAJZAV010000224.1 Protein Homology CDS 12248 13414 . + 0 ID=cds-WP_224052287.1;Parent=gene-LDO49_RS20665;Dbxref=GenBank:WP_224052287.1;Name=WP_224052287.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547969.1;locus_tag=LDO49_RS20665;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_224052287.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 13474 13998 . + . ID=gene-LDO49_RS20670;Name=LDO49_RS20670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20670;old_locus_tag=BCEP4_300018 NZ_CAJZAV010000224.1 Protein Homology CDS 13474 13998 . + 0 ID=cds-WP_021160901.1;Parent=gene-LDO49_RS20670;Dbxref=GenBank:WP_021160901.1;Name=WP_021160901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547968.1;locus_tag=LDO49_RS20670;product=L-2-amino-thiazoline-4-carboxylic acid hydrolase;protein_id=WP_021160901.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 13991 15256 . + . ID=gene-LDO49_RS20675;Name=LDO49_RS20675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20675;old_locus_tag=BCEP4_300019 NZ_CAJZAV010000224.1 Protein Homology CDS 13991 15256 . + 0 ID=cds-WP_224052288.1;Parent=gene-LDO49_RS20675;Dbxref=GenBank:WP_224052288.1;Name=WP_224052288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658532.1;locus_tag=LDO49_RS20675;product=Zn-dependent hydrolase;protein_id=WP_224052288.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 15352 15834 . - . ID=gene-LDO49_RS20680;Name=LDO49_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20680;old_locus_tag=BCEP4_300020 NZ_CAJZAV010000224.1 Protein Homology CDS 15352 15834 . - 0 ID=cds-WP_059623288.1;Parent=gene-LDO49_RS20680;Dbxref=GenBank:WP_059623288.1;Name=WP_059623288.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355545.1;locus_tag=LDO49_RS20680;product=GNAT family N-acetyltransferase;protein_id=WP_059623288.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 15864 16700 . - . ID=gene-LDO49_RS20685;Name=LDO49_RS20685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20685;old_locus_tag=BCEP4_300021 NZ_CAJZAV010000224.1 Protein Homology CDS 15864 16700 . - 0 ID=cds-WP_059492401.1;Parent=gene-LDO49_RS20685;Dbxref=GenBank:WP_059492401.1;Name=WP_059492401.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658533.1;locus_tag=LDO49_RS20685;product=c-type cytochrome;protein_id=WP_059492401.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 16959 17801 . + . ID=gene-LDO49_RS20690;Name=LDO49_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20690;old_locus_tag=BCEP4_300022 NZ_CAJZAV010000224.1 Protein Homology CDS 16959 17801 . + 0 ID=cds-WP_224052289.1;Parent=gene-LDO49_RS20690;Dbxref=GenBank:WP_224052289.1;Name=WP_224052289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467886.1;locus_tag=LDO49_RS20690;product=DUF3626 domain-containing protein;protein_id=WP_224052289.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 17848 19113 . - . ID=gene-LDO49_RS20695;Name=LDO49_RS20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20695;old_locus_tag=BCEP4_300023 NZ_CAJZAV010000224.1 Protein Homology CDS 17848 19113 . - 0 ID=cds-WP_224052290.1;Parent=gene-LDO49_RS20695;Dbxref=GenBank:WP_224052290.1;Name=WP_224052290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547965.1;locus_tag=LDO49_RS20695;product=hypothetical protein;protein_id=WP_224052290.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 19110 20933 . - . ID=gene-LDO49_RS20700;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LDO49_RS20700;old_locus_tag=BCEP4_300024 NZ_CAJZAV010000224.1 Protein Homology CDS 19110 20933 . - 0 ID=cds-WP_048026033.1;Parent=gene-LDO49_RS20700;Dbxref=GenBank:WP_048026033.1;Name=WP_048026033.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759227.1;locus_tag=LDO49_RS20700;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_048026033.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 21061 21549 . - . ID=gene-LDO49_RS20705;Name=LDO49_RS20705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20705;old_locus_tag=BCEP4_300025 NZ_CAJZAV010000224.1 Protein Homology CDS 21061 21549 . - 0 ID=cds-WP_021162105.1;Parent=gene-LDO49_RS20705;Dbxref=GenBank:WP_021162105.1;Name=WP_021162105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899671.1;locus_tag=LDO49_RS20705;product=hypothetical protein;protein_id=WP_021162105.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 21527 22798 . - . ID=gene-LDO49_RS20710;Name=pgaC;gbkey=Gene;gene=pgaC;gene_biotype=protein_coding;locus_tag=LDO49_RS20710;old_locus_tag=BCEP4_300026 NZ_CAJZAV010000224.1 Protein Homology CDS 21527 22798 . - 0 ID=cds-WP_021162104.1;Parent=gene-LDO49_RS20710;Dbxref=GenBank:WP_021162104.1;Name=WP_021162104.1;Ontology_term=GO:0042710,GO:0008375;gbkey=CDS;gene=pgaC;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329772.1;locus_tag=LDO49_RS20710;product=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;protein_id=WP_021162104.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 22795 24885 . - . ID=gene-LDO49_RS20715;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=LDO49_RS20715;old_locus_tag=BCEP4_300027 NZ_CAJZAV010000224.1 Protein Homology CDS 22795 24885 . - 0 ID=cds-WP_059677100.1;Parent=gene-LDO49_RS20715;Dbxref=GenBank:WP_059677100.1;Name=WP_059677100.1;Ontology_term=GO:0000271,GO:0019213;gbkey=CDS;gene=pgaB;go_function=deacetylase activity|0019213||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753607.1;locus_tag=LDO49_RS20715;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;protein_id=WP_059677100.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 24901 27270 . - . ID=gene-LDO49_RS20720;Name=pgaA;gbkey=Gene;gene=pgaA;gene_biotype=protein_coding;locus_tag=LDO49_RS20720;old_locus_tag=BCEP4_300028 NZ_CAJZAV010000224.1 Protein Homology CDS 24901 27270 . - 0 ID=cds-WP_124469956.1;Parent=gene-LDO49_RS20720;Dbxref=GenBank:WP_124469956.1;Name=WP_124469956.1;Ontology_term=GO:1901515,GO:0009279;gbkey=CDS;gene=pgaA;go_component=cell outer membrane|0009279||IEA;go_function=poly-beta-1%2C6-N-acetyl-D-glucosamine transmembrane transporter activity|1901515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694703.1;locus_tag=LDO49_RS20720;product=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;protein_id=WP_124469956.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 27376 28173 . - . ID=gene-LDO49_RS20725;Name=LDO49_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20725;old_locus_tag=BCEP4_300029 NZ_CAJZAV010000224.1 Protein Homology CDS 27376 28173 . - 0 ID=cds-WP_124469955.1;Parent=gene-LDO49_RS20725;Dbxref=GenBank:WP_124469955.1;Name=WP_124469955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495084.1;locus_tag=LDO49_RS20725;product=hypothetical protein;protein_id=WP_124469955.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 28237 28647 . - . ID=gene-LDO49_RS20730;Name=LDO49_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20730;old_locus_tag=BCEP4_300030 NZ_CAJZAV010000224.1 Protein Homology CDS 28237 28647 . - 0 ID=cds-WP_059650988.1;Parent=gene-LDO49_RS20730;Dbxref=GenBank:WP_059650988.1;Name=WP_059650988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417045.1;locus_tag=LDO49_RS20730;product=hypothetical protein;protein_id=WP_059650988.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 29388 30386 . - . ID=gene-LDO49_RS20735;Name=LDO49_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20735;old_locus_tag=BCEP4_300032 NZ_CAJZAV010000224.1 Protein Homology CDS 29388 30386 . - 0 ID=cds-WP_048026038.1;Parent=gene-LDO49_RS20735;Dbxref=GenBank:WP_048026038.1;Name=WP_048026038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899665.1;locus_tag=LDO49_RS20735;product=LysR substrate-binding domain-containing protein;protein_id=WP_048026038.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 30972 32387 . + . ID=gene-LDO49_RS20740;Name=LDO49_RS20740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20740;old_locus_tag=BCEP4_300033 NZ_CAJZAV010000224.1 Protein Homology CDS 30972 32387 . + 0 ID=cds-WP_021162097.1;Parent=gene-LDO49_RS20740;Dbxref=GenBank:WP_021162097.1;Name=WP_021162097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877418.1;locus_tag=LDO49_RS20740;product=circularly permuted type 2 ATP-grasp protein;protein_id=WP_021162097.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 32452 33393 . + . ID=gene-LDO49_RS20745;Name=LDO49_RS20745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20745;old_locus_tag=BCEP4_300034 NZ_CAJZAV010000224.1 Protein Homology CDS 32452 33393 . + 0 ID=cds-WP_021162096.1;Parent=gene-LDO49_RS20745;Dbxref=GenBank:WP_021162096.1;Name=WP_021162096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108140.1;locus_tag=LDO49_RS20745;product=alpha-E domain-containing protein;protein_id=WP_021162096.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 33402 34379 . + . ID=gene-LDO49_RS20750;Name=LDO49_RS20750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20750;old_locus_tag=BCEP4_300035 NZ_CAJZAV010000224.1 Protein Homology CDS 33402 34379 . + 0 ID=cds-WP_021162095.1;Parent=gene-LDO49_RS20750;Dbxref=GenBank:WP_021162095.1;Name=WP_021162095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338363.1;locus_tag=LDO49_RS20750;product=transglutaminase family protein;protein_id=WP_021162095.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq gene 34476 37889 . + . ID=gene-LDO49_RS20755;Name=LDO49_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20755;old_locus_tag=BCEP4_300036 NZ_CAJZAV010000224.1 Protein Homology CDS 34476 37889 . + 0 ID=cds-WP_224052291.1;Parent=gene-LDO49_RS20755;Dbxref=GenBank:WP_224052291.1;Name=WP_224052291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495081.1;locus_tag=LDO49_RS20755;product=transglutaminase family protein;protein_id=WP_224052291.1;transl_table=11 NZ_CAJZAV010000224.1 RefSeq pseudogene 38107 38456 . + . ID=gene-LDO49_RS20760;Name=LDO49_RS20760;end_range=38456,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS20760;partial=true;pseudo=true NZ_CAJZAV010000224.1 Protein Homology CDS 38107 38456 . + 0 ID=cds-LDO49_RS20760;Parent=gene-LDO49_RS20760;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=38456,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355530.1;locus_tag=LDO49_RS20760;partial=true;product=circularly permuted type 2 ATP-grasp protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000225.1 1 2122 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000225.1 RefSeq region 1 2122 . + . ID=NZ_CAJZAV010000225.1:1..2122;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_300 NZ_CAJZAV010000225.1 RefSeq pseudogene 1 426 . - . ID=gene-LDO49_RS20765;Name=LDO49_RS20765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS20765;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000225.1 Protein Homology CDS 1 426 . - 0 ID=cds-LDO49_RS20765;Parent=gene-LDO49_RS20765;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492304.1;locus_tag=LDO49_RS20765;partial=true;product=thiamine phosphate synthase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000225.1 RefSeq gene 423 1238 . - . ID=gene-LDO49_RS20770;Name=LDO49_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20770;old_locus_tag=BCEP4_3000002 NZ_CAJZAV010000225.1 Protein Homology CDS 423 1238 . - 0 ID=cds-WP_224052292.1;Parent=gene-LDO49_RS20770;Dbxref=GenBank:WP_224052292.1;Name=WP_224052292.1;Ontology_term=GO:1990107;gbkey=CDS;go_function=thiazole synthase activity|1990107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106891.1;locus_tag=LDO49_RS20770;product=thiazole synthase;protein_id=WP_224052292.1;transl_table=11 NZ_CAJZAV010000225.1 RefSeq gene 1277 1474 . - . ID=gene-LDO49_RS20775;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=LDO49_RS20775;old_locus_tag=BCEP4_3000003 NZ_CAJZAV010000225.1 Protein Homology CDS 1277 1474 . - 0 ID=cds-WP_011350713.1;Parent=gene-LDO49_RS20775;Dbxref=GenBank:WP_011350713.1;Name=WP_011350713.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009888501.1;locus_tag=LDO49_RS20775;product=sulfur carrier protein ThiS;protein_id=WP_011350713.1;transl_table=11 NZ_CAJZAV010000225.1 RefSeq gene 1507 2122 . - . ID=gene-LDO49_RS20780;Name=LDO49_RS20780;end_range=2122,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20780;old_locus_tag=BCEP4_3000004;partial=true NZ_CAJZAV010000225.1 Protein Homology CDS 1507 2122 . - 1 ID=cds-WP_224052293.1;Parent=gene-LDO49_RS20780;Dbxref=GenBank:WP_224052293.1;Name=WP_224052293.1;Ontology_term=GO:0016491;end_range=2122,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400599.1;locus_tag=LDO49_RS20780;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_224052293.1;transl_table=11 ##sequence-region NZ_CAJZAV010000226.1 1 1351 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000226.1 RefSeq region 1 1351 . + . ID=NZ_CAJZAV010000226.1:1..1351;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_301 NZ_CAJZAV010000226.1 RefSeq gene 84 998 . - . ID=gene-LDO49_RS20785;Name=LDO49_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20785;old_locus_tag=BCEP4_3010001 NZ_CAJZAV010000226.1 Protein Homology CDS 84 998 . - 0 ID=cds-WP_060148357.1;Parent=gene-LDO49_RS20785;Dbxref=GenBank:WP_060148357.1;Name=WP_060148357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349544.1;locus_tag=LDO49_RS20785;product=biotin/lipoyl-binding protein;protein_id=WP_060148357.1;transl_table=11 NZ_CAJZAV010000226.1 RefSeq gene 1023 1217 . - . ID=gene-LDO49_RS20790;Name=LDO49_RS20790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20790;old_locus_tag=BCEP4_3010002 NZ_CAJZAV010000226.1 Protein Homology CDS 1023 1217 . - 0 ID=cds-WP_027792350.1;Parent=gene-LDO49_RS20790;Dbxref=GenBank:WP_027792350.1;Name=WP_027792350.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349545.1;locus_tag=LDO49_RS20790;product=DUF1656 domain-containing protein;protein_id=WP_027792350.1;transl_table=11 ##sequence-region NZ_CAJZAV010000227.1 1 1241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000227.1 RefSeq region 1 1241 . + . ID=NZ_CAJZAV010000227.1:1..1241;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_302 NZ_CAJZAV010000227.1 RefSeq gene 1 418 . + . ID=gene-LDO49_RS20795;Name=LDO49_RS20795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20795;old_locus_tag=BCEP4_3020001;partial=true;start_range=.,1 NZ_CAJZAV010000227.1 Protein Homology CDS 1 418 . + 1 ID=cds-WP_290369872.1;Parent=gene-LDO49_RS20795;Dbxref=GenBank:WP_290369872.1;Name=WP_290369872.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493696.1;locus_tag=LDO49_RS20795;partial=true;product=citrate/2-methylcitrate synthase;protein_id=WP_290369872.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000227.1 RefSeq gene 457 1119 . + . ID=gene-LDO49_RS20800;Name=LDO49_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20800;old_locus_tag=BCEP4_3020002 NZ_CAJZAV010000227.1 Protein Homology CDS 457 1119 . + 0 ID=cds-WP_021160286.1;Parent=gene-LDO49_RS20800;Dbxref=GenBank:WP_021160286.1;Name=WP_021160286.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661009.1;locus_tag=LDO49_RS20800;product=class I SAM-dependent methyltransferase;protein_id=WP_021160286.1;transl_table=11 ##sequence-region NZ_CAJZAV010000228.1 1 729 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000228.1 RefSeq region 1 729 . + . ID=NZ_CAJZAV010000228.1:1..729;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_303 NZ_CAJZAV010000228.1 RefSeq gene 1 729 . + . ID=gene-LDO49_RS20805;Name=LDO49_RS20805;end_range=729,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20805;partial=true;start_range=.,1 NZ_CAJZAV010000228.1 Protein Homology CDS 1 729 . + 0 ID=cds-WP_224052294.1;Parent=gene-LDO49_RS20805;Dbxref=GenBank:WP_224052294.1;Name=WP_224052294.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;end_range=729,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349546.1;locus_tag=LDO49_RS20805;partial=true;product=FUSC family protein;protein_id=WP_224052294.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAV010000229.1 1 5956 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000229.1 RefSeq region 1 5956 . + . ID=NZ_CAJZAV010000229.1:1..5956;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_304 NZ_CAJZAV010000229.1 RefSeq gene 503 1516 . + . ID=gene-LDO49_RS20810;Name=LDO49_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20810;old_locus_tag=BCEP4_3040001 NZ_CAJZAV010000229.1 GeneMarkS-2+ CDS 503 1516 . + 0 ID=cds-WP_202754302.1;Parent=gene-LDO49_RS20810;Dbxref=GenBank:WP_202754302.1;Name=WP_202754302.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS20810;product=hypothetical protein;protein_id=WP_202754302.1;transl_table=11 NZ_CAJZAV010000229.1 RefSeq gene 1629 1736 . + . ID=gene-LDO49_RS20815;Name=LDO49_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20815 NZ_CAJZAV010000229.1 Protein Homology CDS 1629 1736 . + 0 ID=cds-WP_202754301.1;Parent=gene-LDO49_RS20815;Dbxref=GenBank:WP_202754301.1;Name=WP_202754301.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF017717.6;locus_tag=LDO49_RS20815;product=helix-turn-helix transcriptional regulator;protein_id=WP_202754301.1;transl_table=11 NZ_CAJZAV010000229.1 RefSeq gene 2075 3271 . - . ID=gene-LDO49_RS20820;Name=LDO49_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20820;old_locus_tag=BCEP4_3040003 NZ_CAJZAV010000229.1 Protein Homology CDS 2075 3271 . - 0 ID=cds-WP_224052295.1;Parent=gene-LDO49_RS20820;Dbxref=GenBank:WP_224052295.1;Name=WP_224052295.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.6;locus_tag=LDO49_RS20820;product=tyrosine-type recombinase/integrase;protein_id=WP_224052295.1;transl_table=11 NZ_CAJZAV010000229.1 RefSeq gene 3268 3591 . - . ID=gene-LDO49_RS20825;Name=LDO49_RS20825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20825;old_locus_tag=BCEP4_3040004 NZ_CAJZAV010000229.1 Protein Homology CDS 3268 3591 . - 0 ID=cds-WP_307838546.1;Parent=gene-LDO49_RS20825;Dbxref=GenBank:WP_307838546.1;Name=WP_307838546.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025352.6;locus_tag=LDO49_RS20825;product=DUF4224 domain-containing protein;protein_id=WP_307838546.1;transl_table=11 NZ_CAJZAV010000229.1 RefSeq gene 3597 3878 . - . ID=gene-LDO49_RS20830;Name=LDO49_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20830 NZ_CAJZAV010000229.1 GeneMarkS-2+ CDS 3597 3878 . - 0 ID=cds-WP_224052296.1;Parent=gene-LDO49_RS20830;Dbxref=GenBank:WP_224052296.1;Name=WP_224052296.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS20830;product=hypothetical protein;protein_id=WP_224052296.1;transl_table=11 NZ_CAJZAV010000229.1 RefSeq pseudogene 4199 5956 . - . ID=gene-LDO49_RS20835;Name=LDO49_RS20835;end_range=5956,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS20835;old_locus_tag=BCEP4_3040006;partial=true;pseudo=true NZ_CAJZAV010000229.1 Protein Homology CDS 4199 5956 . - 0 ID=cds-LDO49_RS20835;Parent=gene-LDO49_RS20835;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5956,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724653.1;locus_tag=LDO49_RS20835;partial=true;product=toprim domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000230.1 1 672 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000230.1 RefSeq region 1 672 . + . ID=NZ_CAJZAV010000230.1:1..672;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_305 NZ_CAJZAV010000230.1 RefSeq pseudogene 1 81 . - . ID=gene-LDO49_RS20840;Name=LDO49_RS20840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS20840;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000230.1 Protein Homology CDS 1 81 . - 0 ID=cds-LDO49_RS20840;Parent=gene-LDO49_RS20840;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758094.1;locus_tag=LDO49_RS20840;partial=true;product=NAD-dependent oxidoreductase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000230.1 RefSeq pseudogene 187 427 . - . ID=gene-LDO49_RS38285;Name=LDO49_RS38285;end_range=427,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38285;partial=true;pseudo=true NZ_CAJZAV010000230.1 Protein Homology CDS 187 427 . - 1 ID=cds-LDO49_RS38285;Parent=gene-LDO49_RS38285;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=427,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354517.1;locus_tag=LDO49_RS38285;partial=true;product=sterol desaturase family protein;pseudo=true;transl_table=11 NZ_CAJZAV010000230.1 RefSeq gene 532 654 . + . ID=gene-LDO49_RS37325;Name=LDO49_RS37325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37325;old_locus_tag=BCEP4_3050004 NZ_CAJZAV010000230.1 GeneMarkS-2+ CDS 532 654 . + 0 ID=cds-WP_260435675.1;Parent=gene-LDO49_RS37325;Dbxref=GenBank:WP_260435675.1;Name=WP_260435675.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37325;product=hypothetical protein;protein_id=WP_260435675.1;transl_table=11 ##sequence-region NZ_CAJZAV010000231.1 1 1118 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000231.1 RefSeq region 1 1118 . + . ID=NZ_CAJZAV010000231.1:1..1118;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_306 NZ_CAJZAV010000231.1 RefSeq gene 1 190 . + . ID=gene-LDO49_RS38290;Name=LDO49_RS38290;end_range=190,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38290;partial=true;start_range=.,1 NZ_CAJZAV010000231.1 Protein Homology CDS 1 190 . + 0 ID=cds-WP_443797997.1;Parent=gene-LDO49_RS38290;Dbxref=GenBank:WP_443797997.1;Name=WP_443797997.1;end_range=190,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363897.1;locus_tag=LDO49_RS38290;partial=true;product=hypothetical protein;protein_id=WP_443797997.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000231.1 RefSeq pseudogene 201 1118 . + . ID=gene-LDO49_RS20850;Name=LDO49_RS20850;end_range=1118,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS20850;partial=true;pseudo=true;start_range=.,201 NZ_CAJZAV010000231.1 Protein Homology CDS 201 1118 . + 2 ID=cds-LDO49_RS20850;Parent=gene-LDO49_RS20850;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1118,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187933.1;locus_tag=LDO49_RS20850;partial=true;product=LuxR family transcriptional regulator;pseudo=true;start_range=.,201;transl_table=11 ##sequence-region NZ_CAJZAV010000232.1 1 747 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000232.1 RefSeq region 1 747 . + . ID=NZ_CAJZAV010000232.1:1..747;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_307 NZ_CAJZAV010000232.1 RefSeq gene 1 463 . - . ID=gene-LDO49_RS20855;Name=LDO49_RS20855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20855;partial=true;start_range=.,1 NZ_CAJZAV010000232.1 Protein Homology CDS 1 463 . - 0 ID=cds-WP_253074688.1;Parent=gene-LDO49_RS20855;Dbxref=GenBank:WP_253074688.1;Name=WP_253074688.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725714.1;locus_tag=LDO49_RS20855;partial=true;product=alpha-amylase family glycosyl hydrolase;protein_id=WP_253074688.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000232.1 RefSeq gene 528 747 . - . ID=gene-LDO49_RS38295;Name=LDO49_RS38295;end_range=747,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38295;partial=true;start_range=.,528 NZ_CAJZAV010000232.1 Protein Homology CDS 528 747 . - 2 ID=cds-WP_443797998.1;Parent=gene-LDO49_RS38295;Dbxref=GenBank:WP_443797998.1;Name=WP_443797998.1;Ontology_term=GO:0005975,GO:0004134;end_range=747,.;gbkey=CDS;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF014499.6;locus_tag=LDO49_RS38295;partial=true;product=4-alpha-glucanotransferase;protein_id=WP_443797998.1;start_range=.,528;transl_table=11 ##sequence-region NZ_CAJZAV010000233.1 1 5700 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000233.1 RefSeq region 1 5700 . + . ID=NZ_CAJZAV010000233.1:1..5700;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_308 NZ_CAJZAV010000233.1 RefSeq gene 1 371 . + . ID=gene-LDO49_RS20865;Name=LDO49_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20865;old_locus_tag=BCEP4_3080001;partial=true;start_range=.,1 NZ_CAJZAV010000233.1 Protein Homology CDS 1 371 . + 2 ID=cds-WP_224052297.1;Parent=gene-LDO49_RS20865;Dbxref=GenBank:WP_224052297.1;Name=WP_224052297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401801.1;locus_tag=LDO49_RS20865;partial=true;product=phage tail protein;protein_id=WP_224052297.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000233.1 RefSeq gene 458 1387 . + . ID=gene-LDO49_RS20870;Name=LDO49_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20870;old_locus_tag=BCEP4_3080002 NZ_CAJZAV010000233.1 Protein Homology CDS 458 1387 . + 0 ID=cds-WP_443797999.1;Parent=gene-LDO49_RS20870;Dbxref=GenBank:WP_443797999.1;Name=WP_443797999.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017739.6;locus_tag=LDO49_RS20870;product=contractile injection system protein%2C VgrG/Pvc8 family;protein_id=WP_443797999.1;transl_table=11 NZ_CAJZAV010000233.1 RefSeq gene 1980 2360 . + . ID=gene-LDO49_RS20875;Name=LDO49_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20875;old_locus_tag=BCEP4_3080004 NZ_CAJZAV010000233.1 Protein Homology CDS 1980 2360 . + 0 ID=cds-WP_202755168.1;Parent=gene-LDO49_RS20875;Dbxref=GenBank:WP_202755168.1;Name=WP_202755168.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724663.1;locus_tag=LDO49_RS20875;product=helix-turn-helix domain-containing protein;protein_id=WP_202755168.1;transl_table=11 NZ_CAJZAV010000233.1 RefSeq gene 2351 2842 . - . ID=gene-LDO49_RS20880;Name=LDO49_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20880;old_locus_tag=BCEP4_3080005 NZ_CAJZAV010000233.1 Protein Homology CDS 2351 2842 . - 0 ID=cds-WP_224052298.1;Parent=gene-LDO49_RS20880;Dbxref=GenBank:WP_224052298.1;Name=WP_224052298.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401797.1;locus_tag=LDO49_RS20880;product=helix-turn-helix domain-containing protein;protein_id=WP_224052298.1;transl_table=11 NZ_CAJZAV010000233.1 RefSeq gene 2918 3145 . + . ID=gene-LDO49_RS20885;Name=LDO49_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20885;old_locus_tag=BCEP4_3080006 NZ_CAJZAV010000233.1 Protein Homology CDS 2918 3145 . + 0 ID=cds-WP_017432097.1;Parent=gene-LDO49_RS20885;Dbxref=GenBank:WP_017432097.1;Name=WP_017432097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327651.1;locus_tag=LDO49_RS20885;product=hypothetical protein;protein_id=WP_017432097.1;transl_table=11 NZ_CAJZAV010000233.1 RefSeq gene 3162 3353 . + . ID=gene-LDO49_RS20890;Name=LDO49_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20890;old_locus_tag=BCEP4_3080007 NZ_CAJZAV010000233.1 Protein Homology CDS 3162 3353 . + 0 ID=cds-WP_017432096.1;Parent=gene-LDO49_RS20890;Dbxref=GenBank:WP_017432096.1;Name=WP_017432096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327650.1;locus_tag=LDO49_RS20890;product=hypothetical protein;protein_id=WP_017432096.1;transl_table=11 NZ_CAJZAV010000233.1 RefSeq gene 3382 3573 . + . ID=gene-LDO49_RS20895;Name=LDO49_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20895;old_locus_tag=BCEP4_3080009 NZ_CAJZAV010000233.1 Protein Homology CDS 3382 3573 . + 0 ID=cds-WP_012734469.1;Parent=gene-LDO49_RS20895;Dbxref=GenBank:WP_012734469.1;Name=WP_012734469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734469.1;locus_tag=LDO49_RS20895;product=hypothetical protein;protein_id=WP_012734469.1;transl_table=11 NZ_CAJZAV010000233.1 RefSeq gene 3601 3849 . + . ID=gene-LDO49_RS20900;Name=LDO49_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20900;old_locus_tag=BCEP4_3080010 NZ_CAJZAV010000233.1 Protein Homology CDS 3601 3849 . + 0 ID=cds-WP_036036977.1;Parent=gene-LDO49_RS20900;Dbxref=GenBank:WP_036036977.1;Name=WP_036036977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757081.1;locus_tag=LDO49_RS20900;product=ogr/Delta-like zinc finger family protein;protein_id=WP_036036977.1;transl_table=11 NZ_CAJZAV010000233.1 RefSeq gene 3938 4132 . + . ID=gene-LDO49_RS20905;Name=LDO49_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20905;old_locus_tag=BCEP4_3080011 NZ_CAJZAV010000233.1 Protein Homology CDS 3938 4132 . + 0 ID=cds-WP_012734468.1;Parent=gene-LDO49_RS20905;Dbxref=GenBank:WP_012734468.1;Name=WP_012734468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757080.1;locus_tag=LDO49_RS20905;product=hypothetical protein;protein_id=WP_012734468.1;transl_table=11 NZ_CAJZAV010000233.1 RefSeq gene 4137 4331 . + . ID=gene-LDO49_RS20910;Name=LDO49_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20910 NZ_CAJZAV010000233.1 Protein Homology CDS 4137 4331 . + 0 ID=cds-WP_012734467.1;Parent=gene-LDO49_RS20910;Dbxref=GenBank:WP_012734467.1;Name=WP_012734467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734467.1;locus_tag=LDO49_RS20910;product=hypothetical protein;protein_id=WP_012734467.1;transl_table=11 NZ_CAJZAV010000233.1 RefSeq gene 4422 4751 . + . ID=gene-LDO49_RS20915;Name=LDO49_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20915;partial=true;start_range=.,4422 NZ_CAJZAV010000233.1 Protein Homology CDS 4422 4751 . + 0 ID=cds-WP_224052299.1;Parent=gene-LDO49_RS20915;Dbxref=GenBank:WP_224052299.1;Name=WP_224052299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424051.1;locus_tag=LDO49_RS20915;partial=true;product=hypothetical protein;protein_id=WP_224052299.1;start_range=.,4422;transl_table=11 NZ_CAJZAV010000233.1 RefSeq gene 4748 4996 . + . ID=gene-LDO49_RS20920;Name=LDO49_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20920 NZ_CAJZAV010000233.1 Protein Homology CDS 4748 4996 . + 0 ID=cds-WP_012734464.1;Parent=gene-LDO49_RS20920;Dbxref=GenBank:WP_012734464.1;Name=WP_012734464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734464.1;locus_tag=LDO49_RS20920;product=hypothetical protein;protein_id=WP_012734464.1;transl_table=11 NZ_CAJZAV010000233.1 RefSeq pseudogene 4999 5700 . + . ID=gene-LDO49_RS20925;Name=LDO49_RS20925;end_range=5700,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS20925;partial=true;pseudo=true NZ_CAJZAV010000233.1 Protein Homology CDS 4999 5700 . + 0 ID=cds-LDO49_RS20925;Parent=gene-LDO49_RS20925;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=5700,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757075.1;locus_tag=LDO49_RS20925;partial=true;product=toprim domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000234.1 1 664 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000234.1 RefSeq region 1 664 . + . ID=NZ_CAJZAV010000234.1:1..664;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_309 NZ_CAJZAV010000234.1 RefSeq gene 1 264 . - . ID=gene-LDO49_RS20930;Name=LDO49_RS20930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20930;partial=true;start_range=.,1 NZ_CAJZAV010000234.1 Protein Homology CDS 1 264 . - 0 ID=cds-WP_224052300.1;Parent=gene-LDO49_RS20930;Dbxref=GenBank:WP_224052300.1;Name=WP_224052300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196147.1;locus_tag=LDO49_RS20930;partial=true;product=type VI secretion system ImpA family N-terminal domain-containing protein;protein_id=WP_224052300.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000234.1 RefSeq pseudogene 384 664 . - . ID=gene-LDO49_RS20935;Name=LDO49_RS20935;end_range=664,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS20935;old_locus_tag=BCEP4_3090003;partial=true;pseudo=true;start_range=.,384 NZ_CAJZAV010000234.1 Protein Homology CDS 384 664 . - 2 ID=cds-LDO49_RS20935;Parent=gene-LDO49_RS20935;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=664,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004552196.1;locus_tag=LDO49_RS20935;partial=true;product=serine/threonine protein kinase;pseudo=true;start_range=.,384;transl_table=11 ##sequence-region NZ_CAJZAV010000235.1 1 22917 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000235.1 RefSeq region 1 22917 . + . ID=NZ_CAJZAV010000235.1:1..22917;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_31 NZ_CAJZAV010000235.1 RefSeq gene 144 1584 . - . ID=gene-LDO49_RS20940;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=LDO49_RS20940;old_locus_tag=BCEP4_310002;partial=true;start_range=.,144 NZ_CAJZAV010000235.1 Protein Homology CDS 144 1584 . - 0 ID=cds-WP_443798000.1;Parent=gene-LDO49_RS20940;Dbxref=GenBank:WP_443798000.1;Name=WP_443798000.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214361.1;locus_tag=LDO49_RS20940;partial=true;product=penicillin-binding protein 2;protein_id=WP_443798000.1;start_range=.,144;transl_table=11 NZ_CAJZAV010000235.1 RefSeq gene 1693 2205 . - . ID=gene-LDO49_RS20945;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=LDO49_RS20945;old_locus_tag=BCEP4_310003 NZ_CAJZAV010000235.1 Protein Homology CDS 1693 2205 . - 0 ID=cds-WP_009687274.1;Parent=gene-LDO49_RS20945;Dbxref=GenBank:WP_009687274.1;Name=WP_009687274.1;Ontology_term=GO:0008360,GO:0016020;gbkey=CDS;gene=mreD;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189260.1;locus_tag=LDO49_RS20945;product=rod shape-determining protein MreD;protein_id=WP_009687274.1;transl_table=11 NZ_CAJZAV010000235.1 RefSeq gene 2202 3269 . - . ID=gene-LDO49_RS20950;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=LDO49_RS20950;old_locus_tag=BCEP4_310004 NZ_CAJZAV010000235.1 Protein Homology CDS 2202 3269 . - 0 ID=cds-WP_060073975.1;Parent=gene-LDO49_RS20950;Dbxref=GenBank:WP_060073975.1;Name=WP_060073975.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546475.1;locus_tag=LDO49_RS20950;product=rod shape-determining protein MreC;protein_id=WP_060073975.1;transl_table=11 NZ_CAJZAV010000235.1 RefSeq gene 3396 4439 . - . ID=gene-LDO49_RS20955;Name=LDO49_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20955;old_locus_tag=BCEP4_310005 NZ_CAJZAV010000235.1 Protein Homology CDS 3396 4439 . - 0 ID=cds-WP_004189550.1;Parent=gene-LDO49_RS20955;Dbxref=GenBank:WP_004189550.1;Name=WP_004189550.1;Ontology_term=GO:0000902,GO:0008360,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA;go_process=cell morphogenesis|0000902||IEA,regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004628293.1;locus_tag=LDO49_RS20955;product=rod shape-determining protein;protein_id=WP_004189550.1;transl_table=11 NZ_CAJZAV010000235.1 RefSeq gene 4807 5106 . + . ID=gene-LDO49_RS20960;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=LDO49_RS20960;old_locus_tag=BCEP4_310007 NZ_CAJZAV010000235.1 Protein Homology CDS 4807 5106 . + 0 ID=cds-WP_021158568.1;Parent=gene-LDO49_RS20960;Dbxref=GenBank:WP_021158568.1;Name=WP_021158568.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012399478.1;locus_tag=LDO49_RS20960;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_021158568.1;transl_table=11 NZ_CAJZAV010000235.1 RefSeq gene 5172 6662 . + . ID=gene-LDO49_RS20965;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=LDO49_RS20965;old_locus_tag=BCEP4_310008 NZ_CAJZAV010000235.1 Protein Homology CDS 5172 6662 . + 0 ID=cds-WP_048025627.1;Parent=gene-LDO49_RS20965;Dbxref=GenBank:WP_048025627.1;Name=WP_048025627.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494379.1;locus_tag=LDO49_RS20965;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_048025627.1;transl_table=11 NZ_CAJZAV010000235.1 RefSeq gene 6667 8142 . + . ID=gene-LDO49_RS20970;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=LDO49_RS20970;old_locus_tag=BCEP4_310009 NZ_CAJZAV010000235.1 Protein Homology CDS 6667 8142 . + 0 ID=cds-WP_021158566.1;Parent=gene-LDO49_RS20970;Dbxref=GenBank:WP_021158566.1;Name=WP_021158566.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401865.1;locus_tag=LDO49_RS20970;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_021158566.1;transl_table=11 NZ_CAJZAV010000235.1 RefSeq gene 8261 9100 . + . ID=gene-LDO49_RS20975;Name=LDO49_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20975;old_locus_tag=BCEP4_310010 NZ_CAJZAV010000235.1 Protein Homology CDS 8261 9100 . + 0 ID=cds-WP_021158565.1;Parent=gene-LDO49_RS20975;Dbxref=GenBank:WP_021158565.1;Name=WP_021158565.1;Ontology_term=GO:0006797,GO:0008976,GO:0016776;gbkey=CDS;go_function=polyphosphate kinase activity|0008976||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=polyphosphate metabolic process|0006797||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523089.1;locus_tag=LDO49_RS20975;product=polyphosphate kinase 2 family protein;protein_id=WP_021158565.1;transl_table=11 NZ_CAJZAV010000235.1 RefSeq gene 9141 9914 . + . ID=gene-LDO49_RS20980;Name=LDO49_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20980;old_locus_tag=BCEP4_310011 NZ_CAJZAV010000235.1 Protein Homology CDS 9141 9914 . + 0 ID=cds-WP_021158564.1;Parent=gene-LDO49_RS20980;Dbxref=GenBank:WP_021158564.1;Name=WP_021158564.1;Ontology_term=GO:0006281,GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090333.1;locus_tag=LDO49_RS20980;product=exodeoxyribonuclease III;protein_id=WP_021158564.1;transl_table=11 NZ_CAJZAV010000235.1 RefSeq gene 10043 11095 . - . ID=gene-LDO49_RS20985;Name=LDO49_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20985;old_locus_tag=BCEP4_310013 NZ_CAJZAV010000235.1 Protein Homology CDS 10043 11095 . - 0 ID=cds-WP_021158563.1;Parent=gene-LDO49_RS20985;Dbxref=GenBank:WP_021158563.1;Name=WP_021158563.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895709.1;locus_tag=LDO49_RS20985;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_021158563.1;transl_table=11 NZ_CAJZAV010000235.1 RefSeq gene 11324 12268 . + . ID=gene-LDO49_RS20990;Name=LDO49_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20990;old_locus_tag=BCEP4_310012 NZ_CAJZAV010000235.1 Protein Homology CDS 11324 12268 . + 0 ID=cds-WP_042974133.1;Parent=gene-LDO49_RS20990;Dbxref=GenBank:WP_042974133.1;Name=WP_042974133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546471.1;locus_tag=LDO49_RS20990;product=AraC family transcriptional regulator;protein_id=WP_042974133.1;transl_table=11 NZ_CAJZAV010000235.1 RefSeq gene 12278 13354 . - . ID=gene-LDO49_RS20995;Name=LDO49_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS20995;old_locus_tag=BCEP4_310014 NZ_CAJZAV010000235.1 Protein Homology CDS 12278 13354 . - 0 ID=cds-WP_192386691.1;Parent=gene-LDO49_RS20995;Dbxref=GenBank:WP_192386691.1;Name=WP_192386691.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546470.1;locus_tag=LDO49_RS20995;product=M48 family metallopeptidase;protein_id=WP_192386691.1;transl_table=11 NZ_CAJZAV010000235.1 RefSeq gene 13344 14765 . - . ID=gene-LDO49_RS21000;Name=LDO49_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21000;old_locus_tag=BCEP4_310015 NZ_CAJZAV010000235.1 Protein Homology CDS 13344 14765 . - 0 ID=cds-WP_048025623.1;Parent=gene-LDO49_RS21000;Dbxref=GenBank:WP_048025623.1;Name=WP_048025623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407205.1;locus_tag=LDO49_RS21000;product=AmpG family muropeptide MFS transporter;protein_id=WP_048025623.1;transl_table=11 NZ_CAJZAV010000235.1 RefSeq gene 14885 15493 . - . ID=gene-LDO49_RS21005;Name=metW;gbkey=Gene;gene=metW;gene_biotype=protein_coding;locus_tag=LDO49_RS21005;old_locus_tag=BCEP4_310016 NZ_CAJZAV010000235.1 Protein Homology CDS 14885 15493 . - 0 ID=cds-WP_021156285.1;Parent=gene-LDO49_RS21005;Dbxref=GenBank:WP_021156285.1;Name=WP_021156285.1;Ontology_term=GO:0009086;gbkey=CDS;gene=metW;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658215.1;locus_tag=LDO49_RS21005;product=methionine biosynthesis protein MetW;protein_id=WP_021156285.1;transl_table=11 NZ_CAJZAV010000235.1 RefSeq gene 15490 16635 . - . ID=gene-LDO49_RS21010;Name=metX;gbkey=Gene;gene=metX;gene_biotype=protein_coding;locus_tag=LDO49_RS21010;old_locus_tag=BCEP4_310017 NZ_CAJZAV010000235.1 Protein Homology CDS 15490 16635 . - 0 ID=cds-WP_059483953.1;Parent=gene-LDO49_RS21010;Dbxref=GenBank:WP_059483953.1;Name=WP_059483953.1;Ontology_term=GO:0009086,GO:0008899;gbkey=CDS;gene=metX;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017772388.1;locus_tag=LDO49_RS21010;product=homoserine O-succinyltransferase MetX;protein_id=WP_059483953.1;transl_table=11 NZ_CAJZAV010000235.1 RefSeq gene 16910 19996 . - . ID=gene-LDO49_RS21015;Name=LDO49_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21015;old_locus_tag=BCEP4_310018 NZ_CAJZAV010000235.1 Protein Homology CDS 16910 19996 . - 0 ID=cds-WP_224052301.1;Parent=gene-LDO49_RS21015;Dbxref=GenBank:WP_224052301.1;Name=WP_224052301.1;Ontology_term=GO:0015474,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=autotransporter activity|0015474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886334.1;locus_tag=LDO49_RS21015;product=autotransporter family protein;protein_id=WP_224052301.1;transl_table=11 NZ_CAJZAV010000235.1 RefSeq gene 20031 20699 . - . ID=gene-LDO49_RS21020;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=LDO49_RS21020;old_locus_tag=BCEP4_310019 NZ_CAJZAV010000235.1 Protein Homology CDS 20031 20699 . - 0 ID=cds-WP_048244654.1;Parent=gene-LDO49_RS21020;Dbxref=GenBank:WP_048244654.1;Name=WP_048244654.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548171.1;locus_tag=LDO49_RS21020;product=nucleoid occlusion factor SlmA;protein_id=WP_048244654.1;transl_table=11 NZ_CAJZAV010000235.1 RefSeq gene 20666 21457 . - . ID=gene-LDO49_RS21025;Name=LDO49_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21025;old_locus_tag=BCEP4_310020 NZ_CAJZAV010000235.1 Protein Homology CDS 20666 21457 . - 0 ID=cds-WP_021156281.1;Parent=gene-LDO49_RS21025;Dbxref=GenBank:WP_021156281.1;Name=WP_021156281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329425.1;locus_tag=LDO49_RS21025;product=pyrimidine 5'-nucleotidase;protein_id=WP_021156281.1;transl_table=11 NZ_CAJZAV010000235.1 RefSeq gene 21454 22353 . - . ID=gene-LDO49_RS21030;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=LDO49_RS21030;old_locus_tag=BCEP4_310021 NZ_CAJZAV010000235.1 Protein Homology CDS 21454 22353 . - 0 ID=cds-WP_006490510.1;Parent=gene-LDO49_RS21030;Dbxref=GenBank:WP_006490510.1;Name=WP_006490510.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490510.1;locus_tag=LDO49_RS21030;product=acetylglutamate kinase;protein_id=WP_006490510.1;transl_table=11 NZ_CAJZAV010000235.1 RefSeq gene 22672 22893 . + . ID=gene-LDO49_RS21035;Name=LDO49_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21035 NZ_CAJZAV010000235.1 Protein Homology CDS 22672 22893 . + 0 ID=cds-WP_224052302.1;Parent=gene-LDO49_RS21035;Dbxref=GenBank:WP_224052302.1;Name=WP_224052302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495544.1;locus_tag=LDO49_RS21035;product=cysteine-rich CWC family protein;protein_id=WP_224052302.1;transl_table=11 ##sequence-region NZ_CAJZAV010000236.1 1 1013 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000236.1 RefSeq region 1 1013 . + . ID=NZ_CAJZAV010000236.1:1..1013;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_310 NZ_CAJZAV010000236.1 RefSeq gene 1 607 . - . ID=gene-LDO49_RS21040;Name=LDO49_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21040;partial=true;start_range=.,1 NZ_CAJZAV010000236.1 Protein Homology CDS 1 607 . - 0 ID=cds-WP_224052303.1;Parent=gene-LDO49_RS21040;Dbxref=GenBank:WP_224052303.1;Name=WP_224052303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897023.1;locus_tag=LDO49_RS21040;partial=true;product=universal stress protein;protein_id=WP_224052303.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAV010000237.1 1 506 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000237.1 RefSeq region 1 506 . + . ID=NZ_CAJZAV010000237.1:1..506;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_311 NZ_CAJZAV010000237.1 RefSeq gene 1 247 . - . ID=gene-LDO49_RS21045;Name=LDO49_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21045;partial=true;start_range=.,1 NZ_CAJZAV010000237.1 GeneMarkS-2+ CDS 1 247 . - 0 ID=cds-WP_224052304.1;Parent=gene-LDO49_RS21045;Dbxref=GenBank:WP_224052304.1;Name=WP_224052304.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS21045;partial=true;product=hypothetical protein;protein_id=WP_224052304.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAV010000238.1 1 175066 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000238.1 RefSeq region 1 175066 . + . ID=NZ_CAJZAV010000238.1:1..175066;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_32 NZ_CAJZAV010000238.1 RefSeq gene 1 420 . - . ID=gene-LDO49_RS37585;Name=LDO49_RS37585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37585;partial=true;start_range=.,1 NZ_CAJZAV010000238.1 Protein Homology CDS 1 420 . - 0 ID=cds-WP_443798002.1;Parent=gene-LDO49_RS37585;Dbxref=GenBank:WP_443798002.1;Name=WP_443798002.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046612.3;locus_tag=LDO49_RS37585;partial=true;product=bacteriophage T4 gp5 trimerisation domain-containing protein;protein_id=WP_443798002.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 464 1463 . - . ID=gene-LDO49_RS21055;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=LDO49_RS21055;old_locus_tag=BCEP4_320003;partial=true;start_range=.,464 NZ_CAJZAV010000238.1 Protein Homology CDS 464 1463 . - 0 ID=cds-WP_443798001.1;Parent=gene-LDO49_RS21055;Dbxref=GenBank:WP_443798001.1;Name=WP_443798001.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssI;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020202195.1;locus_tag=LDO49_RS21055;partial=true;product=type VI secretion system tip protein TssI/VgrG;protein_id=WP_443798001.1;start_range=.,464;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 2296 2493 . + . ID=gene-LDO49_RS21060;Name=LDO49_RS21060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21060;old_locus_tag=BCEP4_320004 NZ_CAJZAV010000238.1 Protein Homology CDS 2296 2493 . + 0 ID=cds-WP_021157994.1;Parent=gene-LDO49_RS21060;Dbxref=GenBank:WP_021157994.1;Name=WP_021157994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756243.1;locus_tag=LDO49_RS21060;product=hypothetical protein;protein_id=WP_021157994.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 2490 3887 . + . ID=gene-LDO49_RS21065;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=LDO49_RS21065;old_locus_tag=BCEP4_320005 NZ_CAJZAV010000238.1 Protein Homology CDS 2490 3887 . + 0 ID=cds-WP_048021368.1;Parent=gene-LDO49_RS21065;Dbxref=GenBank:WP_048021368.1;Name=WP_048021368.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548605.1;locus_tag=LDO49_RS21065;product=ATP-dependent RNA helicase DbpA;protein_id=WP_048021368.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 4026 4850 . - . ID=gene-LDO49_RS21070;Name=LDO49_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21070;old_locus_tag=BCEP4_320006 NZ_CAJZAV010000238.1 Protein Homology CDS 4026 4850 . - 0 ID=cds-WP_060070119.1;Parent=gene-LDO49_RS21070;Dbxref=GenBank:WP_060070119.1;Name=WP_060070119.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409408.1;locus_tag=LDO49_RS21070;product=phosphate/phosphite/phosphonate ABC transporter substrate-binding protein;protein_id=WP_060070119.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 5149 6174 . + . ID=gene-LDO49_RS21075;Name=LDO49_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21075;old_locus_tag=BCEP4_320007 NZ_CAJZAV010000238.1 Protein Homology CDS 5149 6174 . + 0 ID=cds-WP_060070117.1;Parent=gene-LDO49_RS21075;Dbxref=GenBank:WP_060070117.1;Name=WP_060070117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356565.1;locus_tag=LDO49_RS21075;product=fatty acid desaturase;protein_id=WP_060070117.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 6415 7617 . + . ID=gene-LDO49_RS21080;Name=LDO49_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21080;old_locus_tag=BCEP4_320008 NZ_CAJZAV010000238.1 Protein Homology CDS 6415 7617 . + 0 ID=cds-WP_060070115.1;Parent=gene-LDO49_RS21080;Dbxref=GenBank:WP_060070115.1;Name=WP_060070115.1;Ontology_term=GO:0042919,GO:0042925,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=benzoate transmembrane transporter activity|0042925||IEA;go_process=benzoate transport|0042919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338936.1;locus_tag=LDO49_RS21080;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_060070115.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 7652 8539 . - . ID=gene-LDO49_RS21085;Name=LDO49_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21085;old_locus_tag=BCEP4_320009 NZ_CAJZAV010000238.1 Protein Homology CDS 7652 8539 . - 0 ID=cds-WP_060070113.1;Parent=gene-LDO49_RS21085;Dbxref=GenBank:WP_060070113.1;Name=WP_060070113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365158.1;locus_tag=LDO49_RS21085;product=NmrA family NAD(P)-binding protein;protein_id=WP_060070113.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 9416 9874 . + . ID=gene-LDO49_RS21090;Name=LDO49_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21090 NZ_CAJZAV010000238.1 Protein Homology CDS 9416 9874 . + 0 ID=cds-WP_224052349.1;Parent=gene-LDO49_RS21090;Dbxref=GenBank:WP_224052349.1;Name=WP_224052349.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017315.6;locus_tag=LDO49_RS21090;product=PAAR domain-containing protein;protein_id=WP_224052349.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 9890 10651 . + . ID=gene-LDO49_RS21095;Name=LDO49_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21095;old_locus_tag=BCEP4_320012 NZ_CAJZAV010000238.1 GeneMarkS-2+ CDS 9890 10651 . + 0 ID=cds-WP_124843248.1;Parent=gene-LDO49_RS21095;Dbxref=GenBank:WP_124843248.1;Name=WP_124843248.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS21095;product=hypothetical protein;protein_id=WP_124843248.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 10762 11274 . + . ID=gene-LDO49_RS21100;Name=LDO49_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21100;old_locus_tag=BCEP4_320014 NZ_CAJZAV010000238.1 GeneMarkS-2+ CDS 10762 11274 . + 0 ID=cds-WP_124843246.1;Parent=gene-LDO49_RS21100;Dbxref=GenBank:WP_124843246.1;Name=WP_124843246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS21100;product=hypothetical protein;protein_id=WP_124843246.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 11478 12386 . - . ID=gene-LDO49_RS21105;Name=LDO49_RS21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21105;old_locus_tag=BCEP4_320016 NZ_CAJZAV010000238.1 Protein Homology CDS 11478 12386 . - 0 ID=cds-WP_124843244.1;Parent=gene-LDO49_RS21105;Dbxref=GenBank:WP_124843244.1;Name=WP_124843244.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548611.1;locus_tag=LDO49_RS21105;product=AraC family transcriptional regulator;protein_id=WP_124843244.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 12581 12775 . + . ID=gene-LDO49_RS21110;Name=LDO49_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21110;old_locus_tag=BCEP4_320017 NZ_CAJZAV010000238.1 Protein Homology CDS 12581 12775 . + 0 ID=cds-WP_224052306.1;Parent=gene-LDO49_RS21110;Dbxref=GenBank:WP_224052306.1;Name=WP_224052306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756250.1;locus_tag=LDO49_RS21110;product=hypothetical protein;protein_id=WP_224052306.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 12817 13770 . - . ID=gene-LDO49_RS21115;Name=LDO49_RS21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21115;old_locus_tag=BCEP4_320018 NZ_CAJZAV010000238.1 Protein Homology CDS 12817 13770 . - 0 ID=cds-WP_021158002.1;Parent=gene-LDO49_RS21115;Dbxref=GenBank:WP_021158002.1;Name=WP_021158002.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356572.1;locus_tag=LDO49_RS21115;product=LysR family transcriptional regulator;protein_id=WP_021158002.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 13871 15229 . + . ID=gene-LDO49_RS21120;Name=LDO49_RS21120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21120;old_locus_tag=BCEP4_320019 NZ_CAJZAV010000238.1 Protein Homology CDS 13871 15229 . + 0 ID=cds-WP_021158003.1;Parent=gene-LDO49_RS21120;Dbxref=GenBank:WP_021158003.1;Name=WP_021158003.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365154.1;locus_tag=LDO49_RS21120;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_021158003.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 15554 15988 . + . ID=gene-LDO49_RS21125;Name=LDO49_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21125;old_locus_tag=BCEP4_320020 NZ_CAJZAV010000238.1 Protein Homology CDS 15554 15988 . + 0 ID=cds-WP_021158004.1;Parent=gene-LDO49_RS21125;Dbxref=GenBank:WP_021158004.1;Name=WP_021158004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756252.1;locus_tag=LDO49_RS21125;product=hypothetical protein;protein_id=WP_021158004.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 16168 17787 . + . ID=gene-LDO49_RS21130;Name=LDO49_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21130;old_locus_tag=BCEP4_320021 NZ_CAJZAV010000238.1 Protein Homology CDS 16168 17787 . + 0 ID=cds-WP_224052307.1;Parent=gene-LDO49_RS21130;Dbxref=GenBank:WP_224052307.1;Name=WP_224052307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365152.1;locus_tag=LDO49_RS21130;product=histidine-type phosphatase;protein_id=WP_224052307.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 17878 18408 . - . ID=gene-LDO49_RS21135;Name=LDO49_RS21135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21135;old_locus_tag=BCEP4_320022 NZ_CAJZAV010000238.1 Protein Homology CDS 17878 18408 . - 0 ID=cds-WP_059489604.1;Parent=gene-LDO49_RS21135;Dbxref=GenBank:WP_059489604.1;Name=WP_059489604.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480017.1;locus_tag=LDO49_RS21135;product=YcxB family protein;protein_id=WP_059489604.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 18638 19318 . - . ID=gene-LDO49_RS21140;Name=LDO49_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21140;old_locus_tag=BCEP4_320023 NZ_CAJZAV010000238.1 Protein Homology CDS 18638 19318 . - 0 ID=cds-WP_224052308.1;Parent=gene-LDO49_RS21140;Dbxref=GenBank:WP_224052308.1;Name=WP_224052308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356576.1;locus_tag=LDO49_RS21140;product=alanyl-tRNA editing protein;protein_id=WP_224052308.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 19354 20373 . - . ID=gene-LDO49_RS21145;Name=LDO49_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21145;old_locus_tag=BCEP4_320024 NZ_CAJZAV010000238.1 Protein Homology CDS 19354 20373 . - 0 ID=cds-WP_059489608.1;Parent=gene-LDO49_RS21145;Dbxref=GenBank:WP_059489608.1;Name=WP_059489608.1;Ontology_term=GO:0006629,GO:0008610,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=lipid metabolic process|0006629||IEA,lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356577.1;locus_tag=LDO49_RS21145;product=sterol desaturase family protein;protein_id=WP_059489608.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 20468 21514 . + . ID=gene-LDO49_RS21150;Name=LDO49_RS21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21150;old_locus_tag=BCEP4_320025 NZ_CAJZAV010000238.1 Protein Homology CDS 20468 21514 . + 0 ID=cds-WP_224052309.1;Parent=gene-LDO49_RS21150;Dbxref=GenBank:WP_224052309.1;Name=WP_224052309.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356578.1;locus_tag=LDO49_RS21150;product=AraC family transcriptional regulator;protein_id=WP_224052309.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 21599 21892 . + . ID=gene-LDO49_RS21155;Name=LDO49_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21155;old_locus_tag=BCEP4_320026 NZ_CAJZAV010000238.1 Protein Homology CDS 21599 21892 . + 0 ID=cds-WP_224052310.1;Parent=gene-LDO49_RS21155;Dbxref=GenBank:WP_224052310.1;Name=WP_224052310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494523.1;locus_tag=LDO49_RS21155;product=hypothetical protein;protein_id=WP_224052310.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 21928 22224 . - . ID=gene-LDO49_RS21160;Name=LDO49_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21160;old_locus_tag=BCEP4_320027 NZ_CAJZAV010000238.1 Protein Homology CDS 21928 22224 . - 0 ID=cds-WP_048021340.1;Parent=gene-LDO49_RS21160;Dbxref=GenBank:WP_048021340.1;Name=WP_048021340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356580.1;locus_tag=LDO49_RS21160;product=hypothetical protein;protein_id=WP_048021340.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 22689 24257 . + . ID=gene-LDO49_RS21165;Name=LDO49_RS21165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21165;old_locus_tag=BCEP4_320028 NZ_CAJZAV010000238.1 Protein Homology CDS 22689 24257 . + 0 ID=cds-WP_042973830.1;Parent=gene-LDO49_RS21165;Dbxref=GenBank:WP_042973830.1;Name=WP_042973830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356581.1;locus_tag=LDO49_RS21165;product=EAL domain-containing protein;protein_id=WP_042973830.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 24343 25263 . - . ID=gene-LDO49_RS21170;Name=LDO49_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21170;old_locus_tag=BCEP4_320029 NZ_CAJZAV010000238.1 GeneMarkS-2+ CDS 24343 25263 . - 0 ID=cds-WP_021158014.1;Parent=gene-LDO49_RS21170;Dbxref=GenBank:WP_021158014.1;Name=WP_021158014.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS21170;product=hypothetical protein;protein_id=WP_021158014.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 25260 25634 . - . ID=gene-LDO49_RS21175;Name=LDO49_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21175;old_locus_tag=BCEP4_320030 NZ_CAJZAV010000238.1 GeneMarkS-2+ CDS 25260 25634 . - 0 ID=cds-WP_224052311.1;Parent=gene-LDO49_RS21175;Dbxref=GenBank:WP_224052311.1;Name=WP_224052311.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS21175;product=hypothetical protein;protein_id=WP_224052311.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 25952 26449 . - . ID=gene-LDO49_RS21180;Name=LDO49_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21180;old_locus_tag=BCEP4_320032 NZ_CAJZAV010000238.1 GeneMarkS-2+ CDS 25952 26449 . - 0 ID=cds-WP_021158016.1;Parent=gene-LDO49_RS21180;Dbxref=GenBank:WP_021158016.1;Name=WP_021158016.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS21180;product=hypothetical protein;protein_id=WP_021158016.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 26705 27079 . - . ID=gene-LDO49_RS21185;Name=LDO49_RS21185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21185;old_locus_tag=BCEP4_320033 NZ_CAJZAV010000238.1 Protein Homology CDS 26705 27079 . - 0 ID=cds-WP_124923316.1;Parent=gene-LDO49_RS21185;Dbxref=GenBank:WP_124923316.1;Name=WP_124923316.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024297.7;locus_tag=LDO49_RS21185;product=nuclear transport factor 2 family protein;protein_id=WP_124923316.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 27183 28163 . + . ID=gene-LDO49_RS21190;Name=LDO49_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21190;old_locus_tag=BCEP4_320034 NZ_CAJZAV010000238.1 Protein Homology CDS 27183 28163 . + 0 ID=cds-WP_104766530.1;Parent=gene-LDO49_RS21190;Dbxref=GenBank:WP_104766530.1;Name=WP_104766530.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356583.1;locus_tag=LDO49_RS21190;product=LysR family transcriptional regulator;protein_id=WP_104766530.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 28348 30744 . + . ID=gene-LDO49_RS21195;Name=LDO49_RS21195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21195;old_locus_tag=BCEP4_320035 NZ_CAJZAV010000238.1 Protein Homology CDS 28348 30744 . + 0 ID=cds-WP_224052312.1;Parent=gene-LDO49_RS21195;Dbxref=GenBank:WP_224052312.1;Name=WP_224052312.1;Ontology_term=GO:0000166,GO:0003676,GO:0003887;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleic acid binding|0003676||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483081.1;locus_tag=LDO49_RS21195;product=DNA polymerase II;protein_id=WP_224052312.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 30895 31218 . + . ID=gene-LDO49_RS21200;Name=LDO49_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21200;old_locus_tag=BCEP4_320036 NZ_CAJZAV010000238.1 Protein Homology CDS 30895 31218 . + 0 ID=cds-WP_021158021.1;Parent=gene-LDO49_RS21200;Dbxref=GenBank:WP_021158021.1;Name=WP_021158021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356593.1;locus_tag=LDO49_RS21200;product=DUF4148 domain-containing protein;protein_id=WP_021158021.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 31326 32453 . + . ID=gene-LDO49_RS21205;Name=LDO49_RS21205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21205;old_locus_tag=BCEP4_320037 NZ_CAJZAV010000238.1 Protein Homology CDS 31326 32453 . + 0 ID=cds-WP_224052313.1;Parent=gene-LDO49_RS21205;Dbxref=GenBank:WP_224052313.1;Name=WP_224052313.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900580.1;locus_tag=LDO49_RS21205;product=J domain-containing protein;protein_id=WP_224052313.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 32525 33901 . - . ID=gene-LDO49_RS21210;Name=LDO49_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21210;old_locus_tag=BCEP4_320038 NZ_CAJZAV010000238.1 Protein Homology CDS 32525 33901 . - 0 ID=cds-WP_224052314.1;Parent=gene-LDO49_RS21210;Dbxref=GenBank:WP_224052314.1;Name=WP_224052314.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356594.1;locus_tag=LDO49_RS21210;product=pectinacetylesterase family protein;protein_id=WP_224052314.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 33968 34693 . - . ID=gene-LDO49_RS21215;Name=plcR;gbkey=Gene;gene=plcR;gene_biotype=protein_coding;locus_tag=LDO49_RS21215;old_locus_tag=BCEP4_320039 NZ_CAJZAV010000238.1 Protein Homology CDS 33968 34693 . - 0 ID=cds-WP_224052316.1;Parent=gene-LDO49_RS21215;Dbxref=GenBank:WP_224052316.1;Name=WP_224052316.1;gbkey=CDS;gene=plcR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356595.1;locus_tag=LDO49_RS21215;product=phospholipase C accessory protein PlcR;protein_id=WP_224052316.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 35124 36350 . + . ID=gene-LDO49_RS21220;Name=LDO49_RS21220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21220;old_locus_tag=BCEP4_320040 NZ_CAJZAV010000238.1 Protein Homology CDS 35124 36350 . + 0 ID=cds-WP_060070077.1;Parent=gene-LDO49_RS21220;Dbxref=GenBank:WP_060070077.1;Name=WP_060070077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356596.1;locus_tag=LDO49_RS21220;product=amino acid deaminase/aldolase;protein_id=WP_060070077.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 36415 37827 . + . ID=gene-LDO49_RS21225;Name=LDO49_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21225;old_locus_tag=BCEP4_320041 NZ_CAJZAV010000238.1 Protein Homology CDS 36415 37827 . + 0 ID=cds-WP_060070075.1;Parent=gene-LDO49_RS21225;Dbxref=GenBank:WP_060070075.1;Name=WP_060070075.1;Ontology_term=GO:0003885,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=D-arabinono-1%2C4-lactone oxidase activity|0003885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356597.1;locus_tag=LDO49_RS21225;product=D-arabinono-1%2C4-lactone oxidase;protein_id=WP_060070075.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 37824 39008 . + . ID=gene-LDO49_RS21230;Name=LDO49_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21230;old_locus_tag=BCEP4_320042 NZ_CAJZAV010000238.1 Protein Homology CDS 37824 39008 . + 0 ID=cds-WP_060070073.1;Parent=gene-LDO49_RS21230;Dbxref=GenBank:WP_060070073.1;Name=WP_060070073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356598.1;locus_tag=LDO49_RS21230;product=MFS transporter;protein_id=WP_060070073.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 39146 40342 . + . ID=gene-LDO49_RS21235;Name=LDO49_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21235;old_locus_tag=BCEP4_320043 NZ_CAJZAV010000238.1 Protein Homology CDS 39146 40342 . + 0 ID=cds-WP_224052317.1;Parent=gene-LDO49_RS21235;Dbxref=GenBank:WP_224052317.1;Name=WP_224052317.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356599.1;locus_tag=LDO49_RS21235;product=porin;protein_id=WP_224052317.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 40443 41465 . + . ID=gene-LDO49_RS21240;Name=LDO49_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21240;old_locus_tag=BCEP4_320044 NZ_CAJZAV010000238.1 Protein Homology CDS 40443 41465 . + 0 ID=cds-WP_048021314.1;Parent=gene-LDO49_RS21240;Dbxref=GenBank:WP_048021314.1;Name=WP_048021314.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757793.1;locus_tag=LDO49_RS21240;product=AraC family transcriptional regulator;protein_id=WP_048021314.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 41548 47037 . - . ID=gene-LDO49_RS21245;Name=LDO49_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21245;old_locus_tag=BCEP4_320045 NZ_CAJZAV010000238.1 Protein Homology CDS 41548 47037 . - 0 ID=cds-WP_060070071.1;Parent=gene-LDO49_RS21245;Dbxref=GenBank:WP_060070071.1;Name=WP_060070071.1;Ontology_term=GO:0004386;gbkey=CDS;go_function=helicase activity|0004386||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014619473.1;locus_tag=LDO49_RS21245;product=AAA domain-containing protein;protein_id=WP_060070071.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 47034 48230 . - . ID=gene-LDO49_RS21250;Name=LDO49_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21250;old_locus_tag=BCEP4_320046 NZ_CAJZAV010000238.1 Protein Homology CDS 47034 48230 . - 0 ID=cds-WP_060070068.1;Parent=gene-LDO49_RS21250;Dbxref=GenBank:WP_060070068.1;Name=WP_060070068.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003264794.1;locus_tag=LDO49_RS21250;product=M48 family metalloprotease;protein_id=WP_060070068.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 48418 49143 . - . ID=gene-LDO49_RS21255;Name=LDO49_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21255;old_locus_tag=BCEP4_320048 NZ_CAJZAV010000238.1 Protein Homology CDS 48418 49143 . - 0 ID=cds-WP_021158035.1;Parent=gene-LDO49_RS21255;Dbxref=GenBank:WP_021158035.1;Name=WP_021158035.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014972669.1;locus_tag=LDO49_RS21255;product=GntR family transcriptional regulator;protein_id=WP_021158035.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 49131 49328 . - . ID=gene-LDO49_RS21260;Name=LDO49_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21260 NZ_CAJZAV010000238.1 GeneMarkS-2+ CDS 49131 49328 . - 0 ID=cds-WP_224052319.1;Parent=gene-LDO49_RS21260;Dbxref=GenBank:WP_224052319.1;Name=WP_224052319.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS21260;product=hypothetical protein;protein_id=WP_224052319.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 49327 50547 . + . ID=gene-LDO49_RS21265;Name=LDO49_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21265;old_locus_tag=BCEP4_320049 NZ_CAJZAV010000238.1 Protein Homology CDS 49327 50547 . + 0 ID=cds-WP_224052321.1;Parent=gene-LDO49_RS21265;Dbxref=GenBank:WP_224052321.1;Name=WP_224052321.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007744696.1;locus_tag=LDO49_RS21265;product=pyridoxal-phosphate-dependent aminotransferase family protein;protein_id=WP_224052321.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 50742 52016 . + . ID=gene-LDO49_RS21270;Name=LDO49_RS21270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21270;old_locus_tag=BCEP4_320050 NZ_CAJZAV010000238.1 Protein Homology CDS 50742 52016 . + 0 ID=cds-WP_059620212.1;Parent=gene-LDO49_RS21270;Dbxref=GenBank:WP_059620212.1;Name=WP_059620212.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356612.1;locus_tag=LDO49_RS21270;product=MFS transporter;protein_id=WP_059620212.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 52069 52830 . + . ID=gene-LDO49_RS21275;Name=LDO49_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21275;old_locus_tag=BCEP4_320051 NZ_CAJZAV010000238.1 Protein Homology CDS 52069 52830 . + 0 ID=cds-WP_060306970.1;Parent=gene-LDO49_RS21275;Dbxref=GenBank:WP_060306970.1;Name=WP_060306970.1;Ontology_term=GO:0008684,GO:0030145;gbkey=CDS;go_function=2-oxopent-4-enoate hydratase activity|0008684||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007882819.1;locus_tag=LDO49_RS21275;product=2-keto-4-pentenoate hydratase;protein_id=WP_060306970.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 52894 55932 . + . ID=gene-LDO49_RS21280;Name=LDO49_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21280;old_locus_tag=BCEP4_320052 NZ_CAJZAV010000238.1 Protein Homology CDS 52894 55932 . + 0 ID=cds-WP_224052322.1;Parent=gene-LDO49_RS21280;Dbxref=GenBank:WP_224052322.1;Name=WP_224052322.1;Ontology_term=GO:0016491,GO:0046872,GO:0050660,GO:0051536,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,flavin adenine dinucleotide binding|0050660||IEA,iron-sulfur cluster binding|0051536||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018424063.1;locus_tag=LDO49_RS21280;product=FAD-binding and (Fe-S)-binding domain-containing protein;protein_id=WP_224052322.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 55950 56855 . - . ID=gene-LDO49_RS21285;Name=LDO49_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21285;old_locus_tag=BCEP4_320053 NZ_CAJZAV010000238.1 Protein Homology CDS 55950 56855 . - 0 ID=cds-WP_027790054.1;Parent=gene-LDO49_RS21285;Dbxref=GenBank:WP_027790054.1;Name=WP_027790054.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365135.1;locus_tag=LDO49_RS21285;product=LysR family transcriptional regulator;protein_id=WP_027790054.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 56932 58176 . - . ID=gene-LDO49_RS21290;Name=LDO49_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21290;old_locus_tag=BCEP4_320055 NZ_CAJZAV010000238.1 Protein Homology CDS 56932 58176 . - 0 ID=cds-WP_021158039.1;Parent=gene-LDO49_RS21290;Dbxref=GenBank:WP_021158039.1;Name=WP_021158039.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404545.1;locus_tag=LDO49_RS21290;product=acyl-CoA dehydrogenase family protein;protein_id=WP_021158039.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 58210 58968 . - . ID=gene-LDO49_RS21295;Name=LDO49_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21295;old_locus_tag=BCEP4_320056 NZ_CAJZAV010000238.1 Protein Homology CDS 58210 58968 . - 0 ID=cds-WP_059651834.1;Parent=gene-LDO49_RS21295;Dbxref=GenBank:WP_059651834.1;Name=WP_059651834.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756262.1;locus_tag=LDO49_RS21295;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_059651834.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 58976 59740 . - . ID=gene-LDO49_RS21300;Name=LDO49_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21300;old_locus_tag=BCEP4_320057 NZ_CAJZAV010000238.1 Protein Homology CDS 58976 59740 . - 0 ID=cds-WP_042973844.1;Parent=gene-LDO49_RS21300;Dbxref=GenBank:WP_042973844.1;Name=WP_042973844.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014206877.1;locus_tag=LDO49_RS21300;product=SDR family oxidoreductase;protein_id=WP_042973844.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 59784 60815 . - . ID=gene-LDO49_RS21305;Name=LDO49_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21305;old_locus_tag=BCEP4_320058 NZ_CAJZAV010000238.1 Protein Homology CDS 59784 60815 . - 0 ID=cds-WP_224052323.1;Parent=gene-LDO49_RS21305;Dbxref=GenBank:WP_224052323.1;Name=WP_224052323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094974.1;locus_tag=LDO49_RS21305;product=phosphotransferase;protein_id=WP_224052323.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 60835 61509 . - . ID=gene-LDO49_RS21310;Name=LDO49_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21310;old_locus_tag=BCEP4_320059 NZ_CAJZAV010000238.1 Protein Homology CDS 60835 61509 . - 0 ID=cds-WP_060057822.1;Parent=gene-LDO49_RS21310;Dbxref=GenBank:WP_060057822.1;Name=WP_060057822.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881217.1;locus_tag=LDO49_RS21310;product=histidine phosphatase family protein;protein_id=WP_060057822.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 61710 61865 . + . ID=gene-LDO49_RS21315;Name=LDO49_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21315;old_locus_tag=BCEP4_320060 NZ_CAJZAV010000238.1 Protein Homology CDS 61710 61865 . + 0 ID=cds-WP_021158044.1;Parent=gene-LDO49_RS21315;Dbxref=GenBank:WP_021158044.1;Name=WP_021158044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397610.1;locus_tag=LDO49_RS21315;product=DUF3309 family protein;protein_id=WP_021158044.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 62032 62763 . + . ID=gene-LDO49_RS21320;Name=LDO49_RS21320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21320;old_locus_tag=BCEP4_320061 NZ_CAJZAV010000238.1 Protein Homology CDS 62032 62763 . + 0 ID=cds-WP_224052324.1;Parent=gene-LDO49_RS21320;Dbxref=GenBank:WP_224052324.1;Name=WP_224052324.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338977.1;locus_tag=LDO49_RS21320;product=response regulator;protein_id=WP_224052324.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 62766 63851 . + . ID=gene-LDO49_RS21325;Name=LDO49_RS21325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21325;old_locus_tag=BCEP4_320062 NZ_CAJZAV010000238.1 Protein Homology CDS 62766 63851 . + 0 ID=cds-WP_021158046.1;Parent=gene-LDO49_RS21325;Dbxref=GenBank:WP_021158046.1;Name=WP_021158046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482307.1;locus_tag=LDO49_RS21325;product=ATP-binding protein;protein_id=WP_021158046.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 63886 64578 . - . ID=gene-LDO49_RS21330;Name=LDO49_RS21330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21330;old_locus_tag=BCEP4_320063 NZ_CAJZAV010000238.1 Protein Homology CDS 63886 64578 . - 0 ID=cds-WP_224052325.1;Parent=gene-LDO49_RS21330;Dbxref=GenBank:WP_224052325.1;Name=WP_224052325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548654.1;locus_tag=LDO49_RS21330;product=hypothetical protein;protein_id=WP_224052325.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 64805 65827 . + . ID=gene-LDO49_RS21335;Name=LDO49_RS21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21335;old_locus_tag=BCEP4_320064 NZ_CAJZAV010000238.1 Protein Homology CDS 64805 65827 . + 0 ID=cds-WP_060057828.1;Parent=gene-LDO49_RS21335;Dbxref=GenBank:WP_060057828.1;Name=WP_060057828.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482325.1;locus_tag=LDO49_RS21335;product=MerR family transcriptional regulator;protein_id=WP_060057828.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 65835 66650 . - . ID=gene-LDO49_RS21340;Name=LDO49_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21340;old_locus_tag=BCEP4_320065 NZ_CAJZAV010000238.1 Protein Homology CDS 65835 66650 . - 0 ID=cds-WP_224052326.1;Parent=gene-LDO49_RS21340;Dbxref=GenBank:WP_224052326.1;Name=WP_224052326.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543347.1;locus_tag=LDO49_RS21340;product=alpha/beta hydrolase;protein_id=WP_224052326.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 66664 67956 . - . ID=gene-LDO49_RS21345;Name=LDO49_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21345;old_locus_tag=BCEP4_320066 NZ_CAJZAV010000238.1 Protein Homology CDS 66664 67956 . - 0 ID=cds-WP_021158050.1;Parent=gene-LDO49_RS21345;Dbxref=GenBank:WP_021158050.1;Name=WP_021158050.1;Ontology_term=GO:0007165;gbkey=CDS;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523796.1;locus_tag=LDO49_RS21345;product=MASE1 domain-containing protein;protein_id=WP_021158050.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 68251 68751 . - . ID=gene-LDO49_RS21350;Name=LDO49_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21350;old_locus_tag=BCEP4_320067 NZ_CAJZAV010000238.1 Protein Homology CDS 68251 68751 . - 0 ID=cds-WP_175756617.1;Parent=gene-LDO49_RS21350;Dbxref=GenBank:WP_175756617.1;Name=WP_175756617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356669.1;locus_tag=LDO49_RS21350;product=lipocalin-like domain-containing protein;protein_id=WP_175756617.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 68927 69832 . + . ID=gene-LDO49_RS21355;Name=LDO49_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21355;old_locus_tag=BCEP4_320068 NZ_CAJZAV010000238.1 Protein Homology CDS 68927 69832 . + 0 ID=cds-WP_059489663.1;Parent=gene-LDO49_RS21355;Dbxref=GenBank:WP_059489663.1;Name=WP_059489663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356670.1;locus_tag=LDO49_RS21355;product=LysR substrate-binding domain-containing protein;protein_id=WP_059489663.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 69963 70400 . + . ID=gene-LDO49_RS21360;Name=LDO49_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21360;old_locus_tag=BCEP4_320069 NZ_CAJZAV010000238.1 Protein Homology CDS 69963 70400 . + 0 ID=cds-WP_224052328.1;Parent=gene-LDO49_RS21360;Dbxref=GenBank:WP_224052328.1;Name=WP_224052328.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480076.1;locus_tag=LDO49_RS21360;product=GNAT family N-acetyltransferase;protein_id=WP_224052328.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 70426 71265 . - . ID=gene-LDO49_RS21365;Name=LDO49_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21365;old_locus_tag=BCEP4_320070 NZ_CAJZAV010000238.1 Protein Homology CDS 70426 71265 . - 0 ID=cds-WP_042973835.1;Parent=gene-LDO49_RS21365;Dbxref=GenBank:WP_042973835.1;Name=WP_042973835.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480077.1;locus_tag=LDO49_RS21365;product=peptidylprolyl isomerase;protein_id=WP_042973835.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 71606 73540 . - . ID=gene-LDO49_RS21370;Name=LDO49_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21370;old_locus_tag=BCEP4_320072 NZ_CAJZAV010000238.1 Protein Homology CDS 71606 73540 . - 0 ID=cds-WP_224052329.1;Parent=gene-LDO49_RS21370;Dbxref=GenBank:WP_224052329.1;Name=WP_224052329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482280.1;locus_tag=LDO49_RS21370;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_224052329.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 74071 75375 . - . ID=gene-LDO49_RS21375;Name=LDO49_RS21375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21375;old_locus_tag=BCEP4_320073 NZ_CAJZAV010000238.1 Protein Homology CDS 74071 75375 . - 0 ID=cds-WP_048021285.1;Parent=gene-LDO49_RS21375;Dbxref=GenBank:WP_048021285.1;Name=WP_048021285.1;Ontology_term=GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900628.1;locus_tag=LDO49_RS21375;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_048021285.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 75992 77137 . + . ID=gene-LDO49_RS21380;Name=LDO49_RS21380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21380;old_locus_tag=BCEP4_320075 NZ_CAJZAV010000238.1 Protein Homology CDS 75992 77137 . + 0 ID=cds-WP_042973836.1;Parent=gene-LDO49_RS21380;Dbxref=GenBank:WP_042973836.1;Name=WP_042973836.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356676.1;locus_tag=LDO49_RS21380;product=glycosyltransferase;protein_id=WP_042973836.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 77137 77703 . + . ID=gene-LDO49_RS21385;Name=LDO49_RS21385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21385;old_locus_tag=BCEP4_320076 NZ_CAJZAV010000238.1 Protein Homology CDS 77137 77703 . + 0 ID=cds-WP_021158062.1;Parent=gene-LDO49_RS21385;Dbxref=GenBank:WP_021158062.1;Name=WP_021158062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480081.1;locus_tag=LDO49_RS21385;product=hypothetical protein;protein_id=WP_021158062.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 77727 78461 . + . ID=gene-LDO49_RS21390;Name=LDO49_RS21390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21390;old_locus_tag=BCEP4_320077 NZ_CAJZAV010000238.1 Protein Homology CDS 77727 78461 . + 0 ID=cds-WP_060070049.1;Parent=gene-LDO49_RS21390;Dbxref=GenBank:WP_060070049.1;Name=WP_060070049.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482311.1;locus_tag=LDO49_RS21390;product=polysaccharide deacetylase family protein;protein_id=WP_060070049.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 78489 79724 . - . ID=gene-LDO49_RS21395;Name=LDO49_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21395;old_locus_tag=BCEP4_320078 NZ_CAJZAV010000238.1 Protein Homology CDS 78489 79724 . - 0 ID=cds-WP_060070047.1;Parent=gene-LDO49_RS21395;Dbxref=GenBank:WP_060070047.1;Name=WP_060070047.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.6;locus_tag=LDO49_RS21395;product=MFS transporter;protein_id=WP_060070047.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 80088 81026 . - . ID=gene-LDO49_RS21400;Name=LDO49_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21400;old_locus_tag=BCEP4_320079 NZ_CAJZAV010000238.1 Protein Homology CDS 80088 81026 . - 0 ID=cds-WP_060070045.1;Parent=gene-LDO49_RS21400;Dbxref=GenBank:WP_060070045.1;Name=WP_060070045.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356679.1;locus_tag=LDO49_RS21400;product=alpha/beta hydrolase;protein_id=WP_060070045.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 81029 81913 . - . ID=gene-LDO49_RS21405;Name=LDO49_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21405;old_locus_tag=BCEP4_320080 NZ_CAJZAV010000238.1 Protein Homology CDS 81029 81913 . - 0 ID=cds-WP_021158064.1;Parent=gene-LDO49_RS21405;Dbxref=GenBank:WP_021158064.1;Name=WP_021158064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603947.1;locus_tag=LDO49_RS21405;product=alpha/beta fold hydrolase;protein_id=WP_021158064.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 81947 83002 . - . ID=gene-LDO49_RS21410;Name=LDO49_RS21410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21410;old_locus_tag=BCEP4_320081 NZ_CAJZAV010000238.1 Protein Homology CDS 81947 83002 . - 0 ID=cds-WP_224052350.1;Parent=gene-LDO49_RS21410;Dbxref=GenBank:WP_224052350.1;Name=WP_224052350.1;Ontology_term=GO:0003824,GO:0016853;gbkey=CDS;go_function=catalytic activity|0003824||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016447053.1;locus_tag=LDO49_RS21410;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_224052350.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 83113 83718 . + . ID=gene-LDO49_RS21415;Name=LDO49_RS21415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21415;old_locus_tag=BCEP4_320082 NZ_CAJZAV010000238.1 Protein Homology CDS 83113 83718 . + 0 ID=cds-WP_021158066.1;Parent=gene-LDO49_RS21415;Dbxref=GenBank:WP_021158066.1;Name=WP_021158066.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603973.1;locus_tag=LDO49_RS21415;product=TetR/AcrR family transcriptional regulator;protein_id=WP_021158066.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq pseudogene 83833 84060 . + . ID=gene-LDO49_RS21420;Name=LDO49_RS21420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS21420;old_locus_tag=BCEP4_320083;partial=true;pseudo=true;start_range=.,83833 NZ_CAJZAV010000238.1 Protein Homology CDS 83833 84060 . + 0 ID=cds-LDO49_RS21420;Parent=gene-LDO49_RS21420;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366587.1;locus_tag=LDO49_RS21420;partial=true;product=hypothetical protein;pseudo=true;start_range=.,83833;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 84298 85275 . + . ID=gene-LDO49_RS21425;Name=LDO49_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21425;old_locus_tag=BCEP4_320084 NZ_CAJZAV010000238.1 Protein Homology CDS 84298 85275 . + 0 ID=cds-WP_060070043.1;Parent=gene-LDO49_RS21425;Dbxref=GenBank:WP_060070043.1;Name=WP_060070043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004539585.1;locus_tag=LDO49_RS21425;product=chromate resistance protein ChrB domain-containing protein;protein_id=WP_060070043.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 85272 86450 . + . ID=gene-LDO49_RS21430;Name=LDO49_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21430;old_locus_tag=BCEP4_320085 NZ_CAJZAV010000238.1 Protein Homology CDS 85272 86450 . + 0 ID=cds-WP_059553826.1;Parent=gene-LDO49_RS21430;Dbxref=GenBank:WP_059553826.1;Name=WP_059553826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659986.1;locus_tag=LDO49_RS21430;product=chromate transporter;protein_id=WP_059553826.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 86875 87279 . + . ID=gene-LDO49_RS21435;Name=LDO49_RS21435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21435 NZ_CAJZAV010000238.1 GeneMarkS-2+ CDS 86875 87279 . + 0 ID=cds-WP_048021272.1;Parent=gene-LDO49_RS21435;Dbxref=GenBank:WP_048021272.1;Name=WP_048021272.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS21435;product=hypothetical protein;protein_id=WP_048021272.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 87625 88050 . + . ID=gene-LDO49_RS21440;Name=LDO49_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21440;old_locus_tag=BCEP4_320086 NZ_CAJZAV010000238.1 GeneMarkS-2+ CDS 87625 88050 . + 0 ID=cds-WP_060070042.1;Parent=gene-LDO49_RS21440;Dbxref=GenBank:WP_060070042.1;Name=WP_060070042.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS21440;product=hypothetical protein;protein_id=WP_060070042.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 88309 88926 . + . ID=gene-LDO49_RS21445;Name=LDO49_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21445;old_locus_tag=BCEP4_320087 NZ_CAJZAV010000238.1 Protein Homology CDS 88309 88926 . + 0 ID=cds-WP_048021269.1;Parent=gene-LDO49_RS21445;Dbxref=GenBank:WP_048021269.1;Name=WP_048021269.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480126.1;locus_tag=LDO49_RS21445;product=LysE family translocator;protein_id=WP_048021269.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 89034 89282 . + . ID=gene-LDO49_RS21450;Name=LDO49_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21450;old_locus_tag=BCEP4_320088 NZ_CAJZAV010000238.1 Protein Homology CDS 89034 89282 . + 0 ID=cds-WP_027790093.1;Parent=gene-LDO49_RS21450;Dbxref=GenBank:WP_027790093.1;Name=WP_027790093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749284.1;locus_tag=LDO49_RS21450;product=hypothetical protein;protein_id=WP_027790093.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 89343 90701 . - . ID=gene-LDO49_RS21455;Name=LDO49_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21455;old_locus_tag=BCEP4_320089 NZ_CAJZAV010000238.1 Protein Homology CDS 89343 90701 . - 0 ID=cds-WP_021157591.1;Parent=gene-LDO49_RS21455;Dbxref=GenBank:WP_021157591.1;Name=WP_021157591.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756642.1;locus_tag=LDO49_RS21455;product=MFS transporter;protein_id=WP_021157591.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 91001 91387 . - . ID=gene-LDO49_RS21460;Name=pcaC;gbkey=Gene;gene=pcaC;gene_biotype=protein_coding;locus_tag=LDO49_RS21460;old_locus_tag=BCEP4_320090 NZ_CAJZAV010000238.1 Protein Homology CDS 91001 91387 . - 0 ID=cds-WP_021157590.1;Parent=gene-LDO49_RS21460;Dbxref=GenBank:WP_021157590.1;Name=WP_021157590.1;Ontology_term=GO:0047575;gbkey=CDS;gene=pcaC;go_function=4-carboxymuconolactone decarboxylase activity|0047575||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749282.1;locus_tag=LDO49_RS21460;product=4-carboxymuconolactone decarboxylase;protein_id=WP_021157590.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 91398 92183 . - . ID=gene-LDO49_RS21465;Name=pcaD;gbkey=Gene;gene=pcaD;gene_biotype=protein_coding;locus_tag=LDO49_RS21465;old_locus_tag=BCEP4_320091 NZ_CAJZAV010000238.1 Protein Homology CDS 91398 92183 . - 0 ID=cds-WP_048021267.1;Parent=gene-LDO49_RS21465;Dbxref=GenBank:WP_048021267.1;Name=WP_048021267.1;Ontology_term=GO:0042952,GO:0047570;gbkey=CDS;gene=pcaD;go_function=3-oxoadipate enol-lactonase activity|0047570||IEA;go_process=beta-ketoadipate pathway|0042952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010117629.1;locus_tag=LDO49_RS21465;product=3-oxoadipate enol-lactonase;protein_id=WP_048021267.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 92200 93558 . - . ID=gene-LDO49_RS21470;Name=LDO49_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21470;old_locus_tag=BCEP4_320092 NZ_CAJZAV010000238.1 Protein Homology CDS 92200 93558 . - 0 ID=cds-WP_060070040.1;Parent=gene-LDO49_RS21470;Dbxref=GenBank:WP_060070040.1;Name=WP_060070040.1;Ontology_term=GO:0019619,GO:0047472;gbkey=CDS;go_function=3-carboxy-cis%2Ccis-muconate cycloisomerase activity|0047472||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480130.1;locus_tag=LDO49_RS21470;product=3-carboxy-cis%2Ccis-muconate cycloisomerase;protein_id=WP_060070040.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 93647 94303 . - . ID=gene-LDO49_RS21475;Name=LDO49_RS21475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21475;old_locus_tag=BCEP4_320094 NZ_CAJZAV010000238.1 Protein Homology CDS 93647 94303 . - 0 ID=cds-WP_006482308.1;Parent=gene-LDO49_RS21475;Dbxref=GenBank:WP_006482308.1;Name=WP_006482308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194517.1;locus_tag=LDO49_RS21475;product=CoA transferase subunit B;protein_id=WP_006482308.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 94317 95033 . - . ID=gene-LDO49_RS21480;Name=LDO49_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21480;old_locus_tag=BCEP4_320095 NZ_CAJZAV010000238.1 Protein Homology CDS 94317 95033 . - 0 ID=cds-WP_021157587.1;Parent=gene-LDO49_RS21480;Dbxref=GenBank:WP_021157587.1;Name=WP_021157587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330849.1;locus_tag=LDO49_RS21480;product=3-oxoacid CoA-transferase subunit A;protein_id=WP_021157587.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 95177 96409 . - . ID=gene-LDO49_RS21485;Name=pobA;gbkey=Gene;gene=pobA;gene_biotype=protein_coding;locus_tag=LDO49_RS21485;old_locus_tag=BCEP4_320096 NZ_CAJZAV010000238.1 Protein Homology CDS 95177 96409 . - 0 ID=cds-WP_048021265.1;Parent=gene-LDO49_RS21485;Dbxref=GenBank:WP_048021265.1;Name=WP_048021265.1;Ontology_term=GO:0043639,GO:0018659,GO:0050660;gbkey=CDS;gene=pobA;go_function=4-hydroxybenzoate 3-monooxygenase activity|0018659||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=benzoate catabolic process|0043639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766752.1;locus_tag=LDO49_RS21485;product=4-hydroxybenzoate 3-monooxygenase;protein_id=WP_048021265.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 96526 97452 . + . ID=gene-LDO49_RS21490;Name=LDO49_RS21490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21490;old_locus_tag=BCEP4_320097 NZ_CAJZAV010000238.1 Protein Homology CDS 96526 97452 . + 0 ID=cds-WP_048021263.1;Parent=gene-LDO49_RS21490;Dbxref=GenBank:WP_048021263.1;Name=WP_048021263.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532449.1;locus_tag=LDO49_RS21490;product=LysR family transcriptional regulator;protein_id=WP_048021263.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 97542 98174 . + . ID=gene-LDO49_RS21495;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=LDO49_RS21495;old_locus_tag=BCEP4_320098 NZ_CAJZAV010000238.1 Protein Homology CDS 97542 98174 . + 0 ID=cds-WP_021157584.1;Parent=gene-LDO49_RS21495;Dbxref=GenBank:WP_021157584.1;Name=WP_021157584.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356720.1;locus_tag=LDO49_RS21495;product=GTP cyclohydrolase I FolE;protein_id=WP_021157584.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 98174 98977 . + . ID=gene-LDO49_RS21500;Name=LDO49_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21500;old_locus_tag=BCEP4_320099 NZ_CAJZAV010000238.1 Protein Homology CDS 98174 98977 . + 0 ID=cds-WP_224052330.1;Parent=gene-LDO49_RS21500;Dbxref=GenBank:WP_224052330.1;Name=WP_224052330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494586.1;locus_tag=LDO49_RS21500;product=SDR family oxidoreductase;protein_id=WP_224052330.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 99020 99940 . - . ID=gene-LDO49_RS21505;Name=epsC;gbkey=Gene;gene=epsC;gene_biotype=protein_coding;locus_tag=LDO49_RS21505;old_locus_tag=BCEP4_320100 NZ_CAJZAV010000238.1 Protein Homology CDS 99020 99940 . - 0 ID=cds-WP_021157582.1;Parent=gene-LDO49_RS21505;Dbxref=GenBank:WP_021157582.1;Name=WP_021157582.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=epsC;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756651.1;locus_tag=LDO49_RS21505;product=serine O-acetyltransferase EpsC;protein_id=WP_021157582.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 100078 100311 . - . ID=gene-LDO49_RS21510;Name=LDO49_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21510;old_locus_tag=BCEP4_320102 NZ_CAJZAV010000238.1 Protein Homology CDS 100078 100311 . - 0 ID=cds-WP_011356723.1;Parent=gene-LDO49_RS21510;Dbxref=GenBank:WP_011356723.1;Name=WP_011356723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900672.1;locus_tag=LDO49_RS21510;product=hypothetical protein;protein_id=WP_011356723.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 100590 101000 . + . ID=gene-LDO49_RS21515;Name=LDO49_RS21515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21515;old_locus_tag=BCEP4_320104 NZ_CAJZAV010000238.1 Protein Homology CDS 100590 101000 . + 0 ID=cds-WP_048021258.1;Parent=gene-LDO49_RS21515;Dbxref=GenBank:WP_048021258.1;Name=WP_048021258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339038.1;locus_tag=LDO49_RS21515;product=DUF3005 domain-containing protein;protein_id=WP_048021258.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 101584 102051 . + . ID=gene-LDO49_RS21520;Name=LDO49_RS21520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21520;old_locus_tag=BCEP4_320105 NZ_CAJZAV010000238.1 Protein Homology CDS 101584 102051 . + 0 ID=cds-WP_021157579.1;Parent=gene-LDO49_RS21520;Dbxref=GenBank:WP_021157579.1;Name=WP_021157579.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482283.1;locus_tag=LDO49_RS21520;product=universal stress protein;protein_id=WP_021157579.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 102155 102901 . + . ID=gene-LDO49_RS21525;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=LDO49_RS21525;old_locus_tag=BCEP4_320106 NZ_CAJZAV010000238.1 Protein Homology CDS 102155 102901 . + 0 ID=cds-WP_042973551.1;Parent=gene-LDO49_RS21525;Dbxref=GenBank:WP_042973551.1;Name=WP_042973551.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=fnr;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894572.1;locus_tag=LDO49_RS21525;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_042973551.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 102958 103851 . - . ID=gene-LDO49_RS21530;Name=LDO49_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21530;old_locus_tag=BCEP4_320107 NZ_CAJZAV010000238.1 Protein Homology CDS 102958 103851 . - 0 ID=cds-WP_039344521.1;Parent=gene-LDO49_RS21530;Dbxref=GenBank:WP_039344521.1;Name=WP_039344521.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028391.1;locus_tag=LDO49_RS21530;product=LysR family transcriptional regulator ArgP;protein_id=WP_039344521.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 103962 104582 . + . ID=gene-LDO49_RS21535;Name=LDO49_RS21535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21535;old_locus_tag=BCEP4_320108 NZ_CAJZAV010000238.1 Protein Homology CDS 103962 104582 . + 0 ID=cds-WP_021157577.1;Parent=gene-LDO49_RS21535;Dbxref=GenBank:WP_021157577.1;Name=WP_021157577.1;Ontology_term=GO:0006865,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894570.1;locus_tag=LDO49_RS21535;product=LysE/ArgO family amino acid transporter;protein_id=WP_021157577.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 104646 106370 . - . ID=gene-LDO49_RS21540;Name=LDO49_RS21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21540;old_locus_tag=BCEP4_320109 NZ_CAJZAV010000238.1 Protein Homology CDS 104646 106370 . - 0 ID=cds-WP_021157576.1;Parent=gene-LDO49_RS21540;Dbxref=GenBank:WP_021157576.1;Name=WP_021157576.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482310.1;locus_tag=LDO49_RS21540;product=T6SS phospholipase effector Tle1-like catalytic domain-containing protein;protein_id=WP_021157576.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 106407 107084 . - . ID=gene-LDO49_RS21545;Name=LDO49_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21545;old_locus_tag=BCEP4_320110 NZ_CAJZAV010000238.1 Protein Homology CDS 106407 107084 . - 0 ID=cds-WP_048021253.1;Parent=gene-LDO49_RS21545;Dbxref=GenBank:WP_048021253.1;Name=WP_048021253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749265.1;locus_tag=LDO49_RS21545;product=DUF3304 domain-containing protein;protein_id=WP_048021253.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 107141 108046 . - . ID=gene-LDO49_RS21550;Name=LDO49_RS21550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21550;old_locus_tag=BCEP4_320111 NZ_CAJZAV010000238.1 Protein Homology CDS 107141 108046 . - 0 ID=cds-WP_060070034.1;Parent=gene-LDO49_RS21550;Dbxref=GenBank:WP_060070034.1;Name=WP_060070034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482326.1;locus_tag=LDO49_RS21550;product=DUF4123 domain-containing protein;protein_id=WP_060070034.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 108060 110510 . - . ID=gene-LDO49_RS21555;Name=LDO49_RS21555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21555;old_locus_tag=BCEP4_320112 NZ_CAJZAV010000238.1 Protein Homology CDS 108060 110510 . - 0 ID=cds-WP_224052331.1;Parent=gene-LDO49_RS21555;Dbxref=GenBank:WP_224052331.1;Name=WP_224052331.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694927.1;locus_tag=LDO49_RS21555;product=type VI secretion system Vgr family protein;protein_id=WP_224052331.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 110920 111867 . + . ID=gene-LDO49_RS21560;Name=LDO49_RS21560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21560;old_locus_tag=BCEP4_320113 NZ_CAJZAV010000238.1 Protein Homology CDS 110920 111867 . + 0 ID=cds-WP_060070030.1;Parent=gene-LDO49_RS21560;Dbxref=GenBank:WP_060070030.1;Name=WP_060070030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206780.1;locus_tag=LDO49_RS21560;product=aldo/keto reductase;protein_id=WP_060070030.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 112089 112877 . + . ID=gene-LDO49_RS21565;Name=LDO49_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21565;old_locus_tag=BCEP4_320114 NZ_CAJZAV010000238.1 Protein Homology CDS 112089 112877 . + 0 ID=cds-WP_060070028.1;Parent=gene-LDO49_RS21565;Dbxref=GenBank:WP_060070028.1;Name=WP_060070028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356730.1;locus_tag=LDO49_RS21565;product=hypothetical protein;protein_id=WP_060070028.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 113081 114061 . + . ID=gene-LDO49_RS21570;Name=LDO49_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21570;old_locus_tag=BCEP4_320115 NZ_CAJZAV010000238.1 Protein Homology CDS 113081 114061 . + 0 ID=cds-WP_060070026.1;Parent=gene-LDO49_RS21570;Dbxref=GenBank:WP_060070026.1;Name=WP_060070026.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356731.1;locus_tag=LDO49_RS21570;product=helix-turn-helix domain-containing protein;protein_id=WP_060070026.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 114207 115772 . + . ID=gene-LDO49_RS21575;Name=LDO49_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21575;old_locus_tag=BCEP4_320116 NZ_CAJZAV010000238.1 Protein Homology CDS 114207 115772 . + 0 ID=cds-WP_060070024.1;Parent=gene-LDO49_RS21575;Dbxref=GenBank:WP_060070024.1;Name=WP_060070024.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356732.1;locus_tag=LDO49_RS21575;product=GMC family oxidoreductase;protein_id=WP_060070024.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 115866 116846 . - . ID=gene-LDO49_RS21580;Name=LDO49_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21580;old_locus_tag=BCEP4_320117 NZ_CAJZAV010000238.1 Protein Homology CDS 115866 116846 . - 0 ID=cds-WP_059489722.1;Parent=gene-LDO49_RS21580;Dbxref=GenBank:WP_059489722.1;Name=WP_059489722.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416087.1;locus_tag=LDO49_RS21580;product=helix-turn-helix domain-containing protein;protein_id=WP_059489722.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 117031 117564 . + . ID=gene-LDO49_RS21585;Name=LDO49_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21585;old_locus_tag=BCEP4_320118 NZ_CAJZAV010000238.1 Protein Homology CDS 117031 117564 . + 0 ID=cds-WP_021157568.1;Parent=gene-LDO49_RS21585;Dbxref=GenBank:WP_021157568.1;Name=WP_021157568.1;Ontology_term=GO:0016702,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of two atoms of oxygen|0016702||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480150.1;locus_tag=LDO49_RS21585;product=2%2C4'-dihydroxyacetophenone dioxygenase family protein;protein_id=WP_021157568.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 117583 118887 . + . ID=gene-LDO49_RS21590;Name=LDO49_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21590;old_locus_tag=BCEP4_320119 NZ_CAJZAV010000238.1 Protein Homology CDS 117583 118887 . + 0 ID=cds-WP_060070022.1;Parent=gene-LDO49_RS21590;Dbxref=GenBank:WP_060070022.1;Name=WP_060070022.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356735.1;locus_tag=LDO49_RS21590;product=MFS transporter;protein_id=WP_060070022.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 118889 120010 . + . ID=gene-LDO49_RS21595;Name=LDO49_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21595;old_locus_tag=BCEP4_320120 NZ_CAJZAV010000238.1 Protein Homology CDS 118889 120010 . + 0 ID=cds-WP_060070020.1;Parent=gene-LDO49_RS21595;Dbxref=GenBank:WP_060070020.1;Name=WP_060070020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017774492.1;locus_tag=LDO49_RS21595;product=2%2C3-butanediol dehydrogenase;protein_id=WP_060070020.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 119988 120710 . + . ID=gene-LDO49_RS21600;Name=LDO49_RS21600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21600;old_locus_tag=BCEP4_320121 NZ_CAJZAV010000238.1 Protein Homology CDS 119988 120710 . + 0 ID=cds-WP_060070018.1;Parent=gene-LDO49_RS21600;Dbxref=GenBank:WP_060070018.1;Name=WP_060070018.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356737.1;locus_tag=LDO49_RS21600;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_060070018.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 120895 121986 . + . ID=gene-LDO49_RS21605;Name=LDO49_RS21605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21605;old_locus_tag=BCEP4_320122 NZ_CAJZAV010000238.1 Protein Homology CDS 120895 121986 . + 0 ID=cds-WP_048021234.1;Parent=gene-LDO49_RS21605;Dbxref=GenBank:WP_048021234.1;Name=WP_048021234.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017774491.1;locus_tag=LDO49_RS21605;product=porin;protein_id=WP_048021234.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 122373 122912 . + . ID=gene-LDO49_RS21610;Name=LDO49_RS21610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21610;old_locus_tag=BCEP4_320123 NZ_CAJZAV010000238.1 Protein Homology CDS 122373 122912 . + 0 ID=cds-WP_060070016.1;Parent=gene-LDO49_RS21610;Dbxref=GenBank:WP_060070016.1;Name=WP_060070016.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: protein motif:HMM:NF013460.7;locus_tag=LDO49_RS21610;product=cytochrome b;protein_id=WP_060070016.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 122962 124452 . - . ID=gene-LDO49_RS21615;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=LDO49_RS21615;old_locus_tag=BCEP4_320124 NZ_CAJZAV010000238.1 Protein Homology CDS 122962 124452 . - 0 ID=cds-WP_048021232.1;Parent=gene-LDO49_RS21615;Dbxref=GenBank:WP_048021232.1;Name=WP_048021232.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337455.1;locus_tag=LDO49_RS21615;product=L-asparagine permease;protein_id=WP_048021232.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq pseudogene 124799 127732 . - . ID=gene-LDO49_RS21620;Name=LDO49_RS21620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS21620;old_locus_tag=BCEP4_320125;pseudo=true NZ_CAJZAV010000238.1 Protein Homology CDS 124799 127732 . - 0 ID=cds-LDO49_RS21620;Parent=gene-LDO49_RS21620;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365051.1;locus_tag=LDO49_RS21620;product=TOMM system kinase/cyclase fusion protein;pseudo=true;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 127729 128730 . - . ID=gene-LDO49_RS21625;Name=LDO49_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21625;old_locus_tag=BCEP4_320126 NZ_CAJZAV010000238.1 Protein Homology CDS 127729 128730 . - 0 ID=cds-WP_060070014.1;Parent=gene-LDO49_RS21625;Dbxref=GenBank:WP_060070014.1;Name=WP_060070014.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756667.1;locus_tag=LDO49_RS21625;product=FHA domain-containing protein;protein_id=WP_060070014.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 129813 131324 . + . ID=gene-LDO49_RS21630;Name=LDO49_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21630;old_locus_tag=BCEP4_320128 NZ_CAJZAV010000238.1 Protein Homology CDS 129813 131324 . + 0 ID=cds-WP_060070012.1;Parent=gene-LDO49_RS21630;Dbxref=GenBank:WP_060070012.1;Name=WP_060070012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020227344.1;locus_tag=LDO49_RS21630;product=DNA-3-methyladenine glycosylase 2 family protein;protein_id=WP_060070012.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 131392 132042 . + . ID=gene-LDO49_RS21635;Name=LDO49_RS21635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21635;old_locus_tag=BCEP4_320129 NZ_CAJZAV010000238.1 Protein Homology CDS 131392 132042 . + 0 ID=cds-WP_081067186.1;Parent=gene-LDO49_RS21635;Dbxref=GenBank:WP_081067186.1;Name=WP_081067186.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024922.6;locus_tag=LDO49_RS21635;product=alpha-ketoglutarate-dependent dioxygenase AlkB;protein_id=WP_081067186.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 132348 133907 . - . ID=gene-LDO49_RS21640;Name=LDO49_RS21640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21640;old_locus_tag=BCEP4_320130 NZ_CAJZAV010000238.1 Protein Homology CDS 132348 133907 . - 0 ID=cds-WP_224052334.1;Parent=gene-LDO49_RS21640;Dbxref=GenBank:WP_224052334.1;Name=WP_224052334.1;Ontology_term=GO:0006633,GO:0016717,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on paired donors%2C with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water|0016717||IEA,metal ion binding|0046872||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480165.1;locus_tag=LDO49_RS21640;product=fatty acid desaturase family protein;protein_id=WP_224052334.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 133906 134595 . + . ID=gene-LDO49_RS21645;Name=LDO49_RS21645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21645;old_locus_tag=BCEP4_320131 NZ_CAJZAV010000238.1 Protein Homology CDS 133906 134595 . + 0 ID=cds-WP_224052336.1;Parent=gene-LDO49_RS21645;Dbxref=GenBank:WP_224052336.1;Name=WP_224052336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339053.1;locus_tag=LDO49_RS21645;product=hypothetical protein;protein_id=WP_224052336.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 134600 135706 . + . ID=gene-LDO49_RS21650;Name=LDO49_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21650;old_locus_tag=BCEP4_320132 NZ_CAJZAV010000238.1 Protein Homology CDS 134600 135706 . + 0 ID=cds-WP_059651781.1;Parent=gene-LDO49_RS21650;Dbxref=GenBank:WP_059651781.1;Name=WP_059651781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339054.1;locus_tag=LDO49_RS21650;product=hypothetical protein;protein_id=WP_059651781.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 135694 136614 . - . ID=gene-LDO49_RS21655;Name=LDO49_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21655;old_locus_tag=BCEP4_320133 NZ_CAJZAV010000238.1 Protein Homology CDS 135694 136614 . - 0 ID=cds-WP_060070009.1;Parent=gene-LDO49_RS21655;Dbxref=GenBank:WP_060070009.1;Name=WP_060070009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339055.1;locus_tag=LDO49_RS21655;product=hypothetical protein;protein_id=WP_060070009.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 136611 137495 . - . ID=gene-LDO49_RS21660;Name=LDO49_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21660;old_locus_tag=BCEP4_320134 NZ_CAJZAV010000238.1 Protein Homology CDS 136611 137495 . - 0 ID=cds-WP_224052345.1;Parent=gene-LDO49_RS21660;Dbxref=GenBank:WP_224052345.1;Name=WP_224052345.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339056.1;locus_tag=LDO49_RS21660;product=metal-dependent hydrolase;protein_id=WP_224052345.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 137675 138544 . + . ID=gene-LDO49_RS21665;Name=LDO49_RS21665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21665;old_locus_tag=BCEP4_320135 NZ_CAJZAV010000238.1 Protein Homology CDS 137675 138544 . + 0 ID=cds-WP_230948082.1;Parent=gene-LDO49_RS21665;Dbxref=GenBank:WP_230948082.1;Name=WP_230948082.1;Ontology_term=GO:0006633,GO:0016717,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on paired donors%2C with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water|0016717||IEA,metal ion binding|0046872||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354347.1;locus_tag=LDO49_RS21665;product=fatty acid desaturase family protein;protein_id=WP_230948082.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 138552 140138 . + . ID=gene-LDO49_RS21670;Name=LDO49_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21670;old_locus_tag=BCEP4_320136 NZ_CAJZAV010000238.1 Protein Homology CDS 138552 140138 . + 0 ID=cds-WP_060070002.1;Parent=gene-LDO49_RS21670;Dbxref=GenBank:WP_060070002.1;Name=WP_060070002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339058.1;locus_tag=LDO49_RS21670;product=GH3 family domain-containing protein;protein_id=WP_060070002.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 140132 141253 . + . ID=gene-LDO49_RS21675;Name=LDO49_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21675;old_locus_tag=BCEP4_320137 NZ_CAJZAV010000238.1 Protein Homology CDS 140132 141253 . + 0 ID=cds-WP_081052588.1;Parent=gene-LDO49_RS21675;Dbxref=GenBank:WP_081052588.1;Name=WP_081052588.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339059.1;locus_tag=LDO49_RS21675;product=aromatic ring-hydroxylating oxygenase subunit alpha;protein_id=WP_081052588.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq pseudogene 141385 141552 . - . ID=gene-LDO49_RS21680;Name=LDO49_RS21680;end_range=141552,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS21680;partial=true;pseudo=true;start_range=.,141385 NZ_CAJZAV010000238.1 Protein Homology CDS 141385 141552 . - 0 ID=cds-LDO49_RS21680;Parent=gene-LDO49_RS21680;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=141552,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017774490.1;locus_tag=LDO49_RS21680;partial=true;product=aromatic alcohol reductase;pseudo=true;start_range=.,141385;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 141581 141979 . - . ID=gene-LDO49_RS21685;Name=LDO49_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21685;old_locus_tag=BCEP4_320139 NZ_CAJZAV010000238.1 Protein Homology CDS 141581 141979 . - 0 ID=cds-WP_021157545.1;Parent=gene-LDO49_RS21685;Dbxref=GenBank:WP_021157545.1;Name=WP_021157545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548779.1;locus_tag=LDO49_RS21685;product=nuclear transport factor 2 family protein;protein_id=WP_021157545.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 142062 143003 . + . ID=gene-LDO49_RS21690;Name=LDO49_RS21690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21690 NZ_CAJZAV010000238.1 Protein Homology CDS 142062 143003 . + 0 ID=cds-WP_060070000.1;Parent=gene-LDO49_RS21690;Dbxref=GenBank:WP_060070000.1;Name=WP_060070000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339090.1;locus_tag=LDO49_RS21690;product=LysR substrate-binding domain-containing protein;protein_id=WP_060070000.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 143033 143470 . - . ID=gene-LDO49_RS21695;Name=LDO49_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21695;old_locus_tag=BCEP4_320141 NZ_CAJZAV010000238.1 Protein Homology CDS 143033 143470 . - 0 ID=cds-WP_021157543.1;Parent=gene-LDO49_RS21695;Dbxref=GenBank:WP_021157543.1;Name=WP_021157543.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366572.1;locus_tag=LDO49_RS21695;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_021157543.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 143467 144396 . - . ID=gene-LDO49_RS21700;Name=LDO49_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21700;old_locus_tag=BCEP4_320142 NZ_CAJZAV010000238.1 Protein Homology CDS 143467 144396 . - 0 ID=cds-WP_060069998.1;Parent=gene-LDO49_RS21700;Dbxref=GenBank:WP_060069998.1;Name=WP_060069998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366573.1;locus_tag=LDO49_RS21700;product=homocysteine S-methyltransferase family protein;protein_id=WP_060069998.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 144501 145670 . - . ID=gene-LDO49_RS21705;Name=LDO49_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21705;old_locus_tag=BCEP4_320143 NZ_CAJZAV010000238.1 Protein Homology CDS 144501 145670 . - 0 ID=cds-WP_060069996.1;Parent=gene-LDO49_RS21705;Dbxref=GenBank:WP_060069996.1;Name=WP_060069996.1;Ontology_term=GO:0019346,GO:0016846,GO:0030170;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659269.1;locus_tag=LDO49_RS21705;product=trans-sulfuration enzyme family protein;protein_id=WP_060069996.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 145714 146409 . - . ID=gene-LDO49_RS21710;Name=LDO49_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21710;old_locus_tag=BCEP4_320144 NZ_CAJZAV010000238.1 Protein Homology CDS 145714 146409 . - 0 ID=cds-WP_021157540.1;Parent=gene-LDO49_RS21710;Dbxref=GenBank:WP_021157540.1;Name=WP_021157540.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337271.1;locus_tag=LDO49_RS21710;product=ABC transporter permease;protein_id=WP_021157540.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 146423 147100 . - . ID=gene-LDO49_RS21715;Name=LDO49_RS21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21715;old_locus_tag=BCEP4_320145 NZ_CAJZAV010000238.1 Protein Homology CDS 146423 147100 . - 0 ID=cds-WP_060069995.1;Parent=gene-LDO49_RS21715;Dbxref=GenBank:WP_060069995.1;Name=WP_060069995.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366576.1;locus_tag=LDO49_RS21715;product=ABC transporter permease;protein_id=WP_060069995.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 147172 147951 . - . ID=gene-LDO49_RS21720;Name=LDO49_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21720;old_locus_tag=BCEP4_320146 NZ_CAJZAV010000238.1 Protein Homology CDS 147172 147951 . - 0 ID=cds-WP_021157538.1;Parent=gene-LDO49_RS21720;Dbxref=GenBank:WP_021157538.1;Name=WP_021157538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337269.1;locus_tag=LDO49_RS21720;product=transporter substrate-binding domain-containing protein;protein_id=WP_021157538.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 147983 148780 . - . ID=gene-LDO49_RS21725;Name=LDO49_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21725;old_locus_tag=BCEP4_320147 NZ_CAJZAV010000238.1 Protein Homology CDS 147983 148780 . - 0 ID=cds-WP_021157537.1;Parent=gene-LDO49_RS21725;Dbxref=GenBank:WP_021157537.1;Name=WP_021157537.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659273.1;locus_tag=LDO49_RS21725;product=ABC transporter ATP-binding protein;protein_id=WP_021157537.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 148859 150289 . - . ID=gene-LDO49_RS21730;Name=LDO49_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21730;old_locus_tag=BCEP4_320148 NZ_CAJZAV010000238.1 Protein Homology CDS 148859 150289 . - 0 ID=cds-WP_059586409.1;Parent=gene-LDO49_RS21730;Dbxref=GenBank:WP_059586409.1;Name=WP_059586409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337267.1;locus_tag=LDO49_RS21730;product=aldehyde dehydrogenase family protein;protein_id=WP_059586409.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 150286 151365 . - . ID=gene-LDO49_RS21735;Name=LDO49_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21735;old_locus_tag=BCEP4_320149 NZ_CAJZAV010000238.1 Protein Homology CDS 150286 151365 . - 0 ID=cds-WP_060070125.1;Parent=gene-LDO49_RS21735;Dbxref=GenBank:WP_060070125.1;Name=WP_060070125.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366580.1;locus_tag=LDO49_RS21735;product=homoserine dehydrogenase;protein_id=WP_060070125.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 151517 152014 . - . ID=gene-LDO49_RS21740;Name=LDO49_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21740;old_locus_tag=BCEP4_320150 NZ_CAJZAV010000238.1 Protein Homology CDS 151517 152014 . - 0 ID=cds-WP_048021211.1;Parent=gene-LDO49_RS21740;Dbxref=GenBank:WP_048021211.1;Name=WP_048021211.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659276.1;locus_tag=LDO49_RS21740;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_048021211.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 152046 152726 . - . ID=gene-LDO49_RS21745;Name=LDO49_RS21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21745;old_locus_tag=BCEP4_320152 NZ_CAJZAV010000238.1 Protein Homology CDS 152046 152726 . - 0 ID=cds-WP_060069993.1;Parent=gene-LDO49_RS21745;Dbxref=GenBank:WP_060069993.1;Name=WP_060069993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659277.1;locus_tag=LDO49_RS21745;product=hypothetical protein;protein_id=WP_060069993.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 152763 152978 . + . ID=gene-LDO49_RS21750;Name=LDO49_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21750;old_locus_tag=BCEP4_320151 NZ_CAJZAV010000238.1 GeneMarkS-2+ CDS 152763 152978 . + 0 ID=cds-WP_124474755.1;Parent=gene-LDO49_RS21750;Dbxref=GenBank:WP_124474755.1;Name=WP_124474755.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS21750;product=hypothetical protein;protein_id=WP_124474755.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 152954 153874 . - . ID=gene-LDO49_RS21755;Name=LDO49_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21755;old_locus_tag=BCEP4_320153 NZ_CAJZAV010000238.1 Protein Homology CDS 152954 153874 . - 0 ID=cds-WP_060070123.1;Parent=gene-LDO49_RS21755;Dbxref=GenBank:WP_060070123.1;Name=WP_060070123.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336915.1;locus_tag=LDO49_RS21755;product=LysR family transcriptional regulator;protein_id=WP_060070123.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 154007 154957 . + . ID=gene-LDO49_RS21760;Name=LDO49_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21760;old_locus_tag=BCEP4_320154 NZ_CAJZAV010000238.1 Protein Homology CDS 154007 154957 . + 0 ID=cds-WP_060069991.1;Parent=gene-LDO49_RS21760;Dbxref=GenBank:WP_060069991.1;Name=WP_060069991.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094003.1;locus_tag=LDO49_RS21760;product=ketopantoate reductase family protein;protein_id=WP_060069991.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 154954 155346 . + . ID=gene-LDO49_RS21765;Name=LDO49_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21765;old_locus_tag=BCEP4_320155 NZ_CAJZAV010000238.1 Protein Homology CDS 154954 155346 . + 0 ID=cds-WP_059553860.1;Parent=gene-LDO49_RS21765;Dbxref=GenBank:WP_059553860.1;Name=WP_059553860.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020066714.1;locus_tag=LDO49_RS21765;product=VOC family protein;protein_id=WP_059553860.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 155349 155807 . + . ID=gene-LDO49_RS21770;Name=LDO49_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21770;old_locus_tag=BCEP4_320156 NZ_CAJZAV010000238.1 Protein Homology CDS 155349 155807 . + 0 ID=cds-WP_059489770.1;Parent=gene-LDO49_RS21770;Dbxref=GenBank:WP_059489770.1;Name=WP_059489770.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549085.1;locus_tag=LDO49_RS21770;product=MaoC family dehydratase;protein_id=WP_059489770.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 155807 157027 . + . ID=gene-LDO49_RS21775;Name=LDO49_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21775;old_locus_tag=BCEP4_320157 NZ_CAJZAV010000238.1 Protein Homology CDS 155807 157027 . + 0 ID=cds-WP_021157527.1;Parent=gene-LDO49_RS21775;Dbxref=GenBank:WP_021157527.1;Name=WP_021157527.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335041.1;locus_tag=LDO49_RS21775;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_021157527.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 157027 157860 . + . ID=gene-LDO49_RS21780;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=LDO49_RS21780;old_locus_tag=BCEP4_320158 NZ_CAJZAV010000238.1 Protein Homology CDS 157027 157860 . + 0 ID=cds-WP_060069989.1;Parent=gene-LDO49_RS21780;Dbxref=GenBank:WP_060069989.1;Name=WP_060069989.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498140.1;locus_tag=LDO49_RS21780;product=shikimate dehydrogenase;protein_id=WP_060069989.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 157880 158323 . + . ID=gene-LDO49_RS21785;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=LDO49_RS21785;old_locus_tag=BCEP4_320159 NZ_CAJZAV010000238.1 Protein Homology CDS 157880 158323 . + 0 ID=cds-WP_021157525.1;Parent=gene-LDO49_RS21785;Dbxref=GenBank:WP_021157525.1;Name=WP_021157525.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094012.1;locus_tag=LDO49_RS21785;product=type II 3-dehydroquinate dehydratase;protein_id=WP_021157525.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 158527 159954 . + . ID=gene-LDO49_RS21790;Name=LDO49_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21790;old_locus_tag=BCEP4_320160 NZ_CAJZAV010000238.1 Protein Homology CDS 158527 159954 . + 0 ID=cds-WP_060069987.1;Parent=gene-LDO49_RS21790;Dbxref=GenBank:WP_060069987.1;Name=WP_060069987.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899801.1;locus_tag=LDO49_RS21790;product=MFS transporter;protein_id=WP_060069987.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 160100 161302 . + . ID=gene-LDO49_RS21795;Name=LDO49_RS21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21795;old_locus_tag=BCEP4_320161 NZ_CAJZAV010000238.1 Protein Homology CDS 160100 161302 . + 0 ID=cds-WP_048021546.1;Parent=gene-LDO49_RS21795;Dbxref=GenBank:WP_048021546.1;Name=WP_048021546.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549088.1;locus_tag=LDO49_RS21795;product=MFS transporter;protein_id=WP_048021546.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq pseudogene 161355 161642 . + . ID=gene-LDO49_RS21800;Name=LDO49_RS21800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS21800;partial=true;pseudo=true;start_range=.,161355 NZ_CAJZAV010000238.1 Protein Homology CDS 161355 161642 . + 0 ID=cds-LDO49_RS21800;Parent=gene-LDO49_RS21800;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484561.1;locus_tag=LDO49_RS21800;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,161355;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 161660 162583 . + . ID=gene-LDO49_RS21805;Name=LDO49_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21805;old_locus_tag=BCEP4_320162 NZ_CAJZAV010000238.1 Protein Homology CDS 161660 162583 . + 0 ID=cds-WP_027790154.1;Parent=gene-LDO49_RS21805;Dbxref=GenBank:WP_027790154.1;Name=WP_027790154.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336790.1;locus_tag=LDO49_RS21805;product=LysR family transcriptional regulator;protein_id=WP_027790154.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 162617 163945 . + . ID=gene-LDO49_RS21810;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=LDO49_RS21810;old_locus_tag=BCEP4_320163 NZ_CAJZAV010000238.1 Protein Homology CDS 162617 163945 . + 0 ID=cds-WP_060069985.1;Parent=gene-LDO49_RS21810;Dbxref=GenBank:WP_060069985.1;Name=WP_060069985.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=dctA;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549823.1;locus_tag=LDO49_RS21810;product=C4-dicarboxylate transporter DctA;protein_id=WP_060069985.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 163970 164752 . - . ID=gene-LDO49_RS21815;Name=LDO49_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21815;old_locus_tag=BCEP4_320164 NZ_CAJZAV010000238.1 Protein Homology CDS 163970 164752 . - 0 ID=cds-WP_042973569.1;Parent=gene-LDO49_RS21815;Dbxref=GenBank:WP_042973569.1;Name=WP_042973569.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020068382.1;locus_tag=LDO49_RS21815;product=substrate-binding domain-containing protein;protein_id=WP_042973569.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 164807 166102 . - . ID=gene-LDO49_RS21820;Name=LDO49_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21820;old_locus_tag=BCEP4_320165 NZ_CAJZAV010000238.1 Protein Homology CDS 164807 166102 . - 0 ID=cds-WP_027790157.1;Parent=gene-LDO49_RS21820;Dbxref=GenBank:WP_027790157.1;Name=WP_027790157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397982.1;locus_tag=LDO49_RS21820;product=MFS transporter;protein_id=WP_027790157.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 166440 166973 . - . ID=gene-LDO49_RS21825;Name=LDO49_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21825;old_locus_tag=BCEP4_320166 NZ_CAJZAV010000238.1 Protein Homology CDS 166440 166973 . - 0 ID=cds-WP_060069983.1;Parent=gene-LDO49_RS21825;Dbxref=GenBank:WP_060069983.1;Name=WP_060069983.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012207577.1;locus_tag=LDO49_RS21825;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_060069983.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 167170 168300 . + . ID=gene-LDO49_RS21830;Name=LDO49_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21830;old_locus_tag=BCEP4_320168 NZ_CAJZAV010000238.1 Protein Homology CDS 167170 168300 . + 0 ID=cds-WP_224052347.1;Parent=gene-LDO49_RS21830;Dbxref=GenBank:WP_224052347.1;Name=WP_224052347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480109.1;locus_tag=LDO49_RS21830;product=NmrA family NAD(P)-binding protein;protein_id=WP_224052347.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 168370 168972 . + . ID=gene-LDO49_RS21835;Name=LDO49_RS21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21835;old_locus_tag=BCEP4_320169 NZ_CAJZAV010000238.1 GeneMarkS-2+ CDS 168370 168972 . + 0 ID=cds-WP_060069981.1;Parent=gene-LDO49_RS21835;Dbxref=GenBank:WP_060069981.1;Name=WP_060069981.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS21835;product=hypothetical protein;protein_id=WP_060069981.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 169043 170251 . + . ID=gene-LDO49_RS21840;Name=LDO49_RS21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21840;old_locus_tag=BCEP4_320170 NZ_CAJZAV010000238.1 Protein Homology CDS 169043 170251 . + 0 ID=cds-WP_224052348.1;Parent=gene-LDO49_RS21840;Dbxref=GenBank:WP_224052348.1;Name=WP_224052348.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF005071.0;locus_tag=LDO49_RS21840;product=alpha/beta fold hydrolase;protein_id=WP_224052348.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 171231 171944 . + . ID=gene-LDO49_RS21845;Name=LDO49_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21845;old_locus_tag=BCEP4_320171 NZ_CAJZAV010000238.1 Protein Homology CDS 171231 171944 . + 0 ID=cds-WP_048021182.1;Parent=gene-LDO49_RS21845;Dbxref=GenBank:WP_048021182.1;Name=WP_048021182.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548732.1;locus_tag=LDO49_RS21845;product=PadR family transcriptional regulator;protein_id=WP_048021182.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 171982 172803 . + . ID=gene-LDO49_RS21850;Name=LDO49_RS21850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21850;old_locus_tag=BCEP4_320172 NZ_CAJZAV010000238.1 Protein Homology CDS 171982 172803 . + 0 ID=cds-WP_060069980.1;Parent=gene-LDO49_RS21850;Dbxref=GenBank:WP_060069980.1;Name=WP_060069980.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485177.1;locus_tag=LDO49_RS21850;product=siderophore-interacting protein;protein_id=WP_060069980.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 172971 173195 . + . ID=gene-LDO49_RS21855;Name=LDO49_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21855;old_locus_tag=BCEP4_320173 NZ_CAJZAV010000238.1 Protein Homology CDS 172971 173195 . + 0 ID=cds-WP_021157500.1;Parent=gene-LDO49_RS21855;Dbxref=GenBank:WP_021157500.1;Name=WP_021157500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756670.1;locus_tag=LDO49_RS21855;product=hypothetical protein;protein_id=WP_021157500.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 173220 173801 . - . ID=gene-LDO49_RS21860;Name=LDO49_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21860;old_locus_tag=BCEP4_320174 NZ_CAJZAV010000238.1 Protein Homology CDS 173220 173801 . - 0 ID=cds-WP_021157499.1;Parent=gene-LDO49_RS21860;Dbxref=GenBank:WP_021157499.1;Name=WP_021157499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494607.1;locus_tag=LDO49_RS21860;product=undecaprenyl-diphosphatase;protein_id=WP_021157499.1;transl_table=11 NZ_CAJZAV010000238.1 RefSeq gene 174246 174986 . + . ID=gene-LDO49_RS21865;Name=LDO49_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21865;old_locus_tag=BCEP4_320176 NZ_CAJZAV010000238.1 Protein Homology CDS 174246 174986 . + 0 ID=cds-WP_021157498.1;Parent=gene-LDO49_RS21865;Dbxref=GenBank:WP_021157498.1;Name=WP_021157498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724247.1;locus_tag=LDO49_RS21865;product=acetoacetate decarboxylase;protein_id=WP_021157498.1;transl_table=11 ##sequence-region NZ_CAJZAV010000239.1 1 49930 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000239.1 RefSeq region 1 49930 . + . ID=NZ_CAJZAV010000239.1:1..49930;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_33 NZ_CAJZAV010000239.1 RefSeq gene 312 1529 . + . ID=gene-LDO49_RS21870;Name=LDO49_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21870;old_locus_tag=BCEP4_330001 NZ_CAJZAV010000239.1 Protein Homology CDS 312 1529 . + 0 ID=cds-WP_021162835.1;Parent=gene-LDO49_RS21870;Dbxref=GenBank:WP_021162835.1;Name=WP_021162835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331593.1;locus_tag=LDO49_RS21870;product=DUF2863 family protein;protein_id=WP_021162835.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 1740 2576 . + . ID=gene-LDO49_RS21875;Name=LDO49_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21875;old_locus_tag=BCEP4_330002 NZ_CAJZAV010000239.1 Protein Homology CDS 1740 2576 . + 0 ID=cds-WP_021162834.1;Parent=gene-LDO49_RS21875;Dbxref=GenBank:WP_021162834.1;Name=WP_021162834.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545800.1;locus_tag=LDO49_RS21875;product=response regulator transcription factor;protein_id=WP_021162834.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 2652 3326 . + . ID=gene-LDO49_RS21880;Name=LDO49_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21880;old_locus_tag=BCEP4_330003 NZ_CAJZAV010000239.1 Protein Homology CDS 2652 3326 . + 0 ID=cds-WP_060072183.1;Parent=gene-LDO49_RS21880;Dbxref=GenBank:WP_060072183.1;Name=WP_060072183.1;Ontology_term=GO:0000041,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transition metal ion transport|0000041||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600792.1;locus_tag=LDO49_RS21880;product=energy-coupling factor ABC transporter permease;protein_id=WP_060072183.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 3466 4119 . + . ID=gene-LDO49_RS21885;Name=LDO49_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21885;old_locus_tag=BCEP4_330004 NZ_CAJZAV010000239.1 Protein Homology CDS 3466 4119 . + 0 ID=cds-WP_042977384.1;Parent=gene-LDO49_RS21885;Dbxref=GenBank:WP_042977384.1;Name=WP_042977384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492731.1;locus_tag=LDO49_RS21885;product=BspC domain-containing protein;protein_id=WP_042977384.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 4203 5357 . - . ID=gene-LDO49_RS21890;Name=LDO49_RS21890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21890;old_locus_tag=BCEP4_330005 NZ_CAJZAV010000239.1 Protein Homology CDS 4203 5357 . - 0 ID=cds-WP_060072181.1;Parent=gene-LDO49_RS21890;Dbxref=GenBank:WP_060072181.1;Name=WP_060072181.1;Ontology_term=GO:0006508,GO:0004181,GO:0008270;gbkey=CDS;go_function=metallocarboxypeptidase activity|0004181||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213020.1;locus_tag=LDO49_RS21890;product=M14 family metallopeptidase;protein_id=WP_060072181.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 5495 6277 . - . ID=gene-LDO49_RS21895;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=LDO49_RS21895;old_locus_tag=BCEP4_330006 NZ_CAJZAV010000239.1 Protein Homology CDS 5495 6277 . - 0 ID=cds-WP_021162829.1;Parent=gene-LDO49_RS21895;Dbxref=GenBank:WP_021162829.1;Name=WP_021162829.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331598.1;locus_tag=LDO49_RS21895;product=peroxide stress protein YaaA;protein_id=WP_021162829.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 6335 6814 . + . ID=gene-LDO49_RS21900;Name=LDO49_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21900;old_locus_tag=BCEP4_330007 NZ_CAJZAV010000239.1 Protein Homology CDS 6335 6814 . + 0 ID=cds-WP_021162828.1;Parent=gene-LDO49_RS21900;Dbxref=GenBank:WP_021162828.1;Name=WP_021162828.1;Ontology_term=GO:0004521,GO:0005515;gbkey=CDS;go_function=RNA endonuclease activity|0004521||IEA,protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352679.1;locus_tag=LDO49_RS21900;product=putative toxin-antitoxin system toxin component%2C PIN family;protein_id=WP_021162828.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 6848 8020 . + . ID=gene-LDO49_RS21905;Name=LDO49_RS21905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21905;old_locus_tag=BCEP4_330008 NZ_CAJZAV010000239.1 Protein Homology CDS 6848 8020 . + 0 ID=cds-WP_027786880.1;Parent=gene-LDO49_RS21905;Dbxref=GenBank:WP_027786880.1;Name=WP_027786880.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025129.1;locus_tag=LDO49_RS21905;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_027786880.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 8063 8719 . - . ID=gene-LDO49_RS21910;Name=LDO49_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21910;old_locus_tag=BCEP4_330009 NZ_CAJZAV010000239.1 Protein Homology CDS 8063 8719 . - 0 ID=cds-WP_060072179.1;Parent=gene-LDO49_RS21910;Dbxref=GenBank:WP_060072179.1;Name=WP_060072179.1;Ontology_term=GO:0006749,GO:0043295;gbkey=CDS;go_function=glutathione binding|0043295||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398820.1;locus_tag=LDO49_RS21910;product=glutathione S-transferase family protein;protein_id=WP_060072179.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 8922 9713 . + . ID=gene-LDO49_RS21915;Name=LDO49_RS21915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21915;old_locus_tag=BCEP4_330010 NZ_CAJZAV010000239.1 Protein Homology CDS 8922 9713 . + 0 ID=cds-WP_021162825.1;Parent=gene-LDO49_RS21915;Dbxref=GenBank:WP_021162825.1;Name=WP_021162825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196422.1;locus_tag=LDO49_RS21915;product=oxepin-CoA hydrolase%2C alternative type;protein_id=WP_021162825.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 9917 10609 . + . ID=gene-LDO49_RS21920;Name=LDO49_RS21920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21920;old_locus_tag=BCEP4_330011 NZ_CAJZAV010000239.1 Protein Homology CDS 9917 10609 . + 0 ID=cds-WP_048020511.1;Parent=gene-LDO49_RS21920;Dbxref=GenBank:WP_048020511.1;Name=WP_048020511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723350.1;locus_tag=LDO49_RS21920;product=glutathione binding-like protein;protein_id=WP_048020511.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 10657 11133 . - . ID=gene-LDO49_RS21925;Name=LDO49_RS21925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21925;old_locus_tag=BCEP4_330012 NZ_CAJZAV010000239.1 Protein Homology CDS 10657 11133 . - 0 ID=cds-WP_059618871.1;Parent=gene-LDO49_RS21925;Dbxref=GenBank:WP_059618871.1;Name=WP_059618871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398817.1;locus_tag=LDO49_RS21925;product=MaoC family dehydratase;protein_id=WP_059618871.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 11130 11591 . - . ID=gene-LDO49_RS21930;Name=LDO49_RS21930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21930;old_locus_tag=BCEP4_330013 NZ_CAJZAV010000239.1 Protein Homology CDS 11130 11591 . - 0 ID=cds-WP_042977379.1;Parent=gene-LDO49_RS21930;Dbxref=GenBank:WP_042977379.1;Name=WP_042977379.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364310.1;locus_tag=LDO49_RS21930;product=MaoC family dehydratase;protein_id=WP_042977379.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 11629 12762 . - . ID=gene-LDO49_RS21935;Name=LDO49_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21935;old_locus_tag=BCEP4_330014 NZ_CAJZAV010000239.1 Protein Homology CDS 11629 12762 . - 0 ID=cds-WP_059590685.1;Parent=gene-LDO49_RS21935;Dbxref=GenBank:WP_059590685.1;Name=WP_059590685.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723352.1;locus_tag=LDO49_RS21935;product=acyl-CoA dehydrogenase family protein;protein_id=WP_059590685.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 12782 13978 . - . ID=gene-LDO49_RS21940;Name=LDO49_RS21940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21940;old_locus_tag=BCEP4_330015 NZ_CAJZAV010000239.1 Protein Homology CDS 12782 13978 . - 0 ID=cds-WP_048020505.1;Parent=gene-LDO49_RS21940;Dbxref=GenBank:WP_048020505.1;Name=WP_048020505.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763850.1;locus_tag=LDO49_RS21940;product=acyl-CoA dehydrogenase family protein;protein_id=WP_048020505.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 14082 14504 . - . ID=gene-LDO49_RS21945;Name=LDO49_RS21945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21945;old_locus_tag=BCEP4_330016 NZ_CAJZAV010000239.1 Protein Homology CDS 14082 14504 . - 0 ID=cds-WP_048020504.1;Parent=gene-LDO49_RS21945;Dbxref=GenBank:WP_048020504.1;Name=WP_048020504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185972.1;locus_tag=LDO49_RS21945;product=DUF1178 family protein;protein_id=WP_048020504.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 14641 15231 . - . ID=gene-LDO49_RS21950;Name=LDO49_RS21950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21950;old_locus_tag=BCEP4_330017 NZ_CAJZAV010000239.1 Protein Homology CDS 14641 15231 . - 0 ID=cds-WP_021162820.1;Parent=gene-LDO49_RS21950;Dbxref=GenBank:WP_021162820.1;Name=WP_021162820.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908710.1;locus_tag=LDO49_RS21950;product=NUDIX domain-containing protein;protein_id=WP_021162820.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 15268 15564 . - . ID=gene-LDO49_RS21955;Name=LDO49_RS21955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21955;old_locus_tag=BCEP4_330018 NZ_CAJZAV010000239.1 Protein Homology CDS 15268 15564 . - 0 ID=cds-WP_021162819.1;Parent=gene-LDO49_RS21955;Dbxref=GenBank:WP_021162819.1;Name=WP_021162819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601582.1;locus_tag=LDO49_RS21955;product=DUF2818 family protein;protein_id=WP_021162819.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 15564 17018 . - . ID=gene-LDO49_RS21960;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=LDO49_RS21960;old_locus_tag=BCEP4_330019 NZ_CAJZAV010000239.1 Protein Homology CDS 15564 17018 . - 0 ID=cds-WP_027786870.1;Parent=gene-LDO49_RS21960;Dbxref=GenBank:WP_027786870.1;Name=WP_027786870.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186468.1;locus_tag=LDO49_RS21960;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_027786870.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 17055 18545 . - . ID=gene-LDO49_RS21965;Name=LDO49_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21965;old_locus_tag=BCEP4_330020 NZ_CAJZAV010000239.1 Protein Homology CDS 17055 18545 . - 0 ID=cds-WP_021162817.1;Parent=gene-LDO49_RS21965;Dbxref=GenBank:WP_021162817.1;Name=WP_021162817.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025113.1;locus_tag=LDO49_RS21965;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_021162817.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 18562 20616 . - . ID=gene-LDO49_RS21970;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=LDO49_RS21970;old_locus_tag=BCEP4_330021 NZ_CAJZAV010000239.1 Protein Homology CDS 18562 20616 . - 0 ID=cds-WP_021162816.1;Parent=gene-LDO49_RS21970;Dbxref=GenBank:WP_021162816.1;Name=WP_021162816.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185765.1;locus_tag=LDO49_RS21970;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_021162816.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 20634 20939 . - . ID=gene-LDO49_RS21975;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=LDO49_RS21975;old_locus_tag=BCEP4_330022 NZ_CAJZAV010000239.1 Protein Homology CDS 20634 20939 . - 0 ID=cds-WP_006478272.1;Parent=gene-LDO49_RS21975;Dbxref=GenBank:WP_006478272.1;Name=WP_006478272.1;gbkey=CDS;gene=nuoK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007588140.1;locus_tag=LDO49_RS21975;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_006478272.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 20958 21608 . - . ID=gene-LDO49_RS21980;Name=LDO49_RS21980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS21980;old_locus_tag=BCEP4_330023 NZ_CAJZAV010000239.1 Protein Homology CDS 20958 21608 . - 0 ID=cds-WP_060072177.1;Parent=gene-LDO49_RS21980;Dbxref=GenBank:WP_060072177.1;Name=WP_060072177.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885528.1;locus_tag=LDO49_RS21980;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_060072177.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 21721 22209 . - . ID=gene-LDO49_RS21985;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=LDO49_RS21985;old_locus_tag=BCEP4_330024 NZ_CAJZAV010000239.1 Protein Homology CDS 21721 22209 . - 0 ID=cds-WP_009691265.1;Parent=gene-LDO49_RS21985;Dbxref=GenBank:WP_009691265.1;Name=WP_009691265.1;Ontology_term=GO:0016651,GO:0051539;gbkey=CDS;gene=nuoI;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885529.1;locus_tag=LDO49_RS21985;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_009691265.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 22220 23287 . - . ID=gene-LDO49_RS21990;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=LDO49_RS21990;old_locus_tag=BCEP4_330025 NZ_CAJZAV010000239.1 Protein Homology CDS 22220 23287 . - 0 ID=cds-WP_021162814.1;Parent=gene-LDO49_RS21990;Dbxref=GenBank:WP_021162814.1;Name=WP_021162814.1;Ontology_term=GO:0016020;gbkey=CDS;gene=nuoH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896507.1;locus_tag=LDO49_RS21990;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_021162814.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 23288 25618 . - . ID=gene-LDO49_RS21995;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=LDO49_RS21995;old_locus_tag=BCEP4_330026 NZ_CAJZAV010000239.1 Protein Homology CDS 23288 25618 . - 0 ID=cds-WP_059553702.1;Parent=gene-LDO49_RS21995;Dbxref=GenBank:WP_059553702.1;Name=WP_059553702.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213012.1;locus_tag=LDO49_RS21995;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_059553702.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 25701 27011 . - . ID=gene-LDO49_RS22000;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=LDO49_RS22000;old_locus_tag=BCEP4_330027 NZ_CAJZAV010000239.1 Protein Homology CDS 25701 27011 . - 0 ID=cds-WP_006478267.1;Parent=gene-LDO49_RS22000;Dbxref=GenBank:WP_006478267.1;Name=WP_006478267.1;Ontology_term=GO:0010181,GO:0050136,GO:0051287,GO:0051539;gbkey=CDS;gene=nuoF;go_function=FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896505.1;locus_tag=LDO49_RS22000;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_006478267.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 27008 27493 . - . ID=gene-LDO49_RS22005;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=LDO49_RS22005;old_locus_tag=BCEP4_330028 NZ_CAJZAV010000239.1 Protein Homology CDS 27008 27493 . - 0 ID=cds-WP_006756903.1;Parent=gene-LDO49_RS22005;Dbxref=GenBank:WP_006756903.1;Name=WP_006756903.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401393.1;locus_tag=LDO49_RS22005;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_006756903.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 27679 28932 . - . ID=gene-LDO49_RS22010;Name=LDO49_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22010;old_locus_tag=BCEP4_330029 NZ_CAJZAV010000239.1 Protein Homology CDS 27679 28932 . - 0 ID=cds-WP_006478265.1;Parent=gene-LDO49_RS22010;Dbxref=GenBank:WP_006478265.1;Name=WP_006478265.1;Ontology_term=GO:0016651,GO:0048038,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,quinone binding|0048038||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014191758.1;locus_tag=LDO49_RS22010;product=NADH-quinone oxidoreductase subunit D;protein_id=WP_006478265.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 28942 29544 . - . ID=gene-LDO49_RS22015;Name=LDO49_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22015;old_locus_tag=BCEP4_330030 NZ_CAJZAV010000239.1 Protein Homology CDS 28942 29544 . - 0 ID=cds-WP_006478264.1;Parent=gene-LDO49_RS22015;Dbxref=GenBank:WP_006478264.1;Name=WP_006478264.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018442918.1;locus_tag=LDO49_RS22015;product=NADH-quinone oxidoreductase subunit C;protein_id=WP_006478264.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 29566 30045 . - . ID=gene-LDO49_RS22020;Name=LDO49_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22020;old_locus_tag=BCEP4_330031 NZ_CAJZAV010000239.1 Protein Homology CDS 29566 30045 . - 0 ID=cds-WP_006398799.1;Parent=gene-LDO49_RS22020;Dbxref=GenBank:WP_006398799.1;Name=WP_006398799.1;Ontology_term=GO:0008137,GO:0016655,GO:0048038,GO:0051539,GO:0005886,GO:0045271;gbkey=CDS;go_component=plasma membrane|0005886||IEA,respiratory chain complex I|0045271||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186402.1;locus_tag=LDO49_RS22020;product=NuoB/complex I 20 kDa subunit family protein;protein_id=WP_006398799.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 30108 30467 . - . ID=gene-LDO49_RS22025;Name=LDO49_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22025;old_locus_tag=BCEP4_330032 NZ_CAJZAV010000239.1 Protein Homology CDS 30108 30467 . - 0 ID=cds-WP_006398798.1;Parent=gene-LDO49_RS22025;Dbxref=GenBank:WP_006398798.1;Name=WP_006398798.1;Ontology_term=GO:0016655,GO:0048038,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013339872.1;locus_tag=LDO49_RS22025;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_006398798.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 30621 30705 . - . ID=gene-LDO49_RS22030;Name=LDO49_RS22030;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS22030;old_locus_tag=BCEP4_TRNA43 NZ_CAJZAV010000239.1 tRNAscan-SE tRNA 30621 30705 . - . ID=rna-LDO49_RS22030;Parent=gene-LDO49_RS22030;anticodon=(pos:complement(30669..30671));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS22030;product=tRNA-Leu NZ_CAJZAV010000239.1 tRNAscan-SE exon 30621 30705 . - . ID=exon-LDO49_RS22030-1;Parent=rna-LDO49_RS22030;anticodon=(pos:complement(30669..30671));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS22030;product=tRNA-Leu NZ_CAJZAV010000239.1 RefSeq gene 30818 31198 . - . ID=gene-LDO49_RS22035;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=LDO49_RS22035;old_locus_tag=BCEP4_330033 NZ_CAJZAV010000239.1 Protein Homology CDS 30818 31198 . - 0 ID=cds-WP_042977371.1;Parent=gene-LDO49_RS22035;Dbxref=GenBank:WP_042977371.1;Name=WP_042977371.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600349.1;locus_tag=LDO49_RS22035;product=preprotein translocase subunit SecG;protein_id=WP_042977371.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 31271 32026 . - . ID=gene-LDO49_RS22040;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=LDO49_RS22040;old_locus_tag=BCEP4_330034 NZ_CAJZAV010000239.1 Protein Homology CDS 31271 32026 . - 0 ID=cds-WP_021162811.1;Parent=gene-LDO49_RS22040;Dbxref=GenBank:WP_021162811.1;Name=WP_021162811.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657484.1;locus_tag=LDO49_RS22040;product=triose-phosphate isomerase;protein_id=WP_021162811.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 32190 33209 . - . ID=gene-LDO49_RS22045;Name=LDO49_RS22045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22045;old_locus_tag=BCEP4_330035 NZ_CAJZAV010000239.1 Protein Homology CDS 32190 33209 . - 0 ID=cds-WP_059618943.1;Parent=gene-LDO49_RS22045;Dbxref=GenBank:WP_059618943.1;Name=WP_059618943.1;Ontology_term=GO:0003960,GO:0048038,GO:0070402;gbkey=CDS;go_function=quinone reductase (NADPH) activity|0003960||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600129.1;locus_tag=LDO49_RS22045;product=NAD(P)H-quinone oxidoreductase;protein_id=WP_059618943.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 33362 35509 . - . ID=gene-LDO49_RS22050;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=LDO49_RS22050;old_locus_tag=BCEP4_330036 NZ_CAJZAV010000239.1 Protein Homology CDS 33362 35509 . - 0 ID=cds-WP_042977387.1;Parent=gene-LDO49_RS22050;Dbxref=GenBank:WP_042977387.1;Name=WP_042977387.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410113.1;locus_tag=LDO49_RS22050;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_042977387.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 35800 36069 . - . ID=gene-LDO49_RS22055;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=LDO49_RS22055;old_locus_tag=BCEP4_330037 NZ_CAJZAV010000239.1 Protein Homology CDS 35800 36069 . - 0 ID=cds-WP_006398792.1;Parent=gene-LDO49_RS22055;Dbxref=GenBank:WP_006398792.1;Name=WP_006398792.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401401.1;locus_tag=LDO49_RS22055;product=30S ribosomal protein S15;protein_id=WP_006398792.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 36188 37447 . - . ID=gene-LDO49_RS22060;Name=LDO49_RS22060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22060;old_locus_tag=BCEP4_330038 NZ_CAJZAV010000239.1 Protein Homology CDS 36188 37447 . - 0 ID=cds-WP_060072175.1;Parent=gene-LDO49_RS22060;Dbxref=GenBank:WP_060072175.1;Name=WP_060072175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478259.1;locus_tag=LDO49_RS22060;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_060072175.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 37617 38129 . + . ID=gene-LDO49_RS22065;Name=LDO49_RS22065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22065;old_locus_tag=BCEP4_330039 NZ_CAJZAV010000239.1 Protein Homology CDS 37617 38129 . + 0 ID=cds-WP_048020494.1;Parent=gene-LDO49_RS22065;Dbxref=GenBank:WP_048020494.1;Name=WP_048020494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405570.1;locus_tag=LDO49_RS22065;product=hypothetical protein;protein_id=WP_048020494.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 38512 39153 . + . ID=gene-LDO49_RS22070;Name=LDO49_RS22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22070;old_locus_tag=BCEP4_330040 NZ_CAJZAV010000239.1 Protein Homology CDS 38512 39153 . + 0 ID=cds-WP_059487327.1;Parent=gene-LDO49_RS22070;Dbxref=GenBank:WP_059487327.1;Name=WP_059487327.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415554.1;locus_tag=LDO49_RS22070;product=carbonic anhydrase;protein_id=WP_059487327.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 39188 40738 . + . ID=gene-LDO49_RS22075;Name=LDO49_RS22075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22075;old_locus_tag=BCEP4_330041 NZ_CAJZAV010000239.1 Protein Homology CDS 39188 40738 . + 0 ID=cds-WP_021162804.1;Parent=gene-LDO49_RS22075;Dbxref=GenBank:WP_021162804.1;Name=WP_021162804.1;Ontology_term=GO:0015103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic anion transmembrane transporter activity|0015103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723364.1;locus_tag=LDO49_RS22075;product=SulP family inorganic anion transporter;protein_id=WP_021162804.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 40810 42354 . - . ID=gene-LDO49_RS22080;Name=LDO49_RS22080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22080;old_locus_tag=BCEP4_330042 NZ_CAJZAV010000239.1 Protein Homology CDS 40810 42354 . - 0 ID=cds-WP_021162803.1;Parent=gene-LDO49_RS22080;Dbxref=GenBank:WP_021162803.1;Name=WP_021162803.1;Ontology_term=GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398785.1;locus_tag=LDO49_RS22080;product=2-isopropylmalate synthase;protein_id=WP_021162803.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 42672 43544 . - . ID=gene-LDO49_RS22085;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=LDO49_RS22085;old_locus_tag=BCEP4_330044 NZ_CAJZAV010000239.1 Protein Homology CDS 42672 43544 . - 0 ID=cds-WP_060072173.1;Parent=gene-LDO49_RS22085;Dbxref=GenBank:WP_060072173.1;Name=WP_060072173.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186682.1;locus_tag=LDO49_RS22085;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_060072173.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 43560 44204 . - . ID=gene-LDO49_RS22090;Name=LDO49_RS22090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22090;old_locus_tag=BCEP4_330045 NZ_CAJZAV010000239.1 Protein Homology CDS 43560 44204 . - 0 ID=cds-WP_027784995.1;Parent=gene-LDO49_RS22090;Dbxref=GenBank:WP_027784995.1;Name=WP_027784995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331633.1;locus_tag=LDO49_RS22090;product=phosphatidylserine decarboxylase;protein_id=WP_027784995.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 44332 45348 . - . ID=gene-LDO49_RS22095;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=LDO49_RS22095;old_locus_tag=BCEP4_330046 NZ_CAJZAV010000239.1 Protein Homology CDS 44332 45348 . - 0 ID=cds-WP_021162800.1;Parent=gene-LDO49_RS22095;Dbxref=GenBank:WP_021162800.1;Name=WP_021162800.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011902902.1;locus_tag=LDO49_RS22095;product=ketol-acid reductoisomerase;protein_id=WP_021162800.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 45453 45944 . - . ID=gene-LDO49_RS22100;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=LDO49_RS22100;old_locus_tag=BCEP4_330047 NZ_CAJZAV010000239.1 Protein Homology CDS 45453 45944 . - 0 ID=cds-WP_011352712.1;Parent=gene-LDO49_RS22100;Dbxref=GenBank:WP_011352712.1;Name=WP_011352712.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004630835.1;locus_tag=LDO49_RS22100;product=acetolactate synthase small subunit;protein_id=WP_011352712.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 46056 47819 . - . ID=gene-LDO49_RS22105;Name=LDO49_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22105;old_locus_tag=BCEP4_330048 NZ_CAJZAV010000239.1 Protein Homology CDS 46056 47819 . - 0 ID=cds-WP_042977362.1;Parent=gene-LDO49_RS22105;Dbxref=GenBank:WP_042977362.1;Name=WP_042977362.1;Ontology_term=GO:0009082,GO:0003984;gbkey=CDS;go_function=acetolactate synthase activity|0003984||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185769.1;locus_tag=LDO49_RS22105;product=acetolactate synthase 3 catalytic subunit;protein_id=WP_042977362.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 48175 48738 . + . ID=gene-LDO49_RS22110;Name=LDO49_RS22110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22110;old_locus_tag=BCEP4_330049 NZ_CAJZAV010000239.1 Protein Homology CDS 48175 48738 . + 0 ID=cds-WP_021162797.1;Parent=gene-LDO49_RS22110;Dbxref=GenBank:WP_021162797.1;Name=WP_021162797.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011487480.1;locus_tag=LDO49_RS22110;product=RNA polymerase sigma factor;protein_id=WP_021162797.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 48735 49103 . + . ID=gene-LDO49_RS22115;Name=LDO49_RS22115;end_range=49103,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22115;partial=true NZ_CAJZAV010000239.1 Protein Homology CDS 48735 49103 . + 0 ID=cds-WP_443798003.1;Parent=gene-LDO49_RS22115;Dbxref=GenBank:WP_443798003.1;Name=WP_443798003.1;end_range=49103,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185907.1;locus_tag=LDO49_RS22115;partial=true;product=DUF3619 family protein;protein_id=WP_443798003.1;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 49114 49204 . + . ID=gene-LDO49_RS38305;Name=LDO49_RS38305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38305;old_locus_tag=BCEP4_330051;partial=true;start_range=.,49114 NZ_CAJZAV010000239.1 Protein Homology CDS 49114 49204 . + 1 ID=cds-WP_443798004.1;Parent=gene-LDO49_RS38305;Dbxref=GenBank:WP_443798004.1;Name=WP_443798004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185907.1;locus_tag=LDO49_RS38305;partial=true;product=DUF3619 family protein;protein_id=WP_443798004.1;start_range=.,49114;transl_table=11 NZ_CAJZAV010000239.1 RefSeq gene 49231 49930 . + . ID=gene-LDO49_RS22120;Name=LDO49_RS22120;end_range=49930,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22120;partial=true NZ_CAJZAV010000239.1 Protein Homology CDS 49231 49930 . + 0 ID=cds-WP_224052351.1;Parent=gene-LDO49_RS22120;Dbxref=GenBank:WP_224052351.1;Name=WP_224052351.1;end_range=49930,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328911.1;locus_tag=LDO49_RS22120;partial=true;product=DUF3106 domain-containing protein;protein_id=WP_224052351.1;transl_table=11 ##sequence-region NZ_CAJZAV010000240.1 1 45181 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000240.1 RefSeq region 1 45181 . + . ID=NZ_CAJZAV010000240.1:1..45181;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_34 NZ_CAJZAV010000240.1 RefSeq gene 415 966 . - . ID=gene-LDO49_RS22125;Name=LDO49_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22125;old_locus_tag=BCEP4_340001 NZ_CAJZAV010000240.1 Protein Homology CDS 415 966 . - 0 ID=cds-WP_059487355.1;Parent=gene-LDO49_RS22125;Dbxref=GenBank:WP_059487355.1;Name=WP_059487355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216384.1;locus_tag=LDO49_RS22125;product=phosphonate degradation HD-domain oxygenase;protein_id=WP_059487355.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 971 2425 . - . ID=gene-LDO49_RS22130;Name=phnY;gbkey=Gene;gene=phnY;gene_biotype=protein_coding;locus_tag=LDO49_RS22130;old_locus_tag=BCEP4_340002 NZ_CAJZAV010000240.1 Protein Homology CDS 971 2425 . - 0 ID=cds-WP_021159320.1;Parent=gene-LDO49_RS22130;Dbxref=GenBank:WP_021159320.1;Name=WP_021159320.1;gbkey=CDS;gene=phnY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406897.1;locus_tag=LDO49_RS22130;product=phosphonoacetaldehyde dehydrogenase;protein_id=WP_021159320.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 2422 3729 . - . ID=gene-LDO49_RS22135;Name=phnA;gbkey=Gene;gene=phnA;gene_biotype=protein_coding;locus_tag=LDO49_RS22135;old_locus_tag=BCEP4_340003 NZ_CAJZAV010000240.1 Protein Homology CDS 2422 3729 . - 0 ID=cds-WP_060074337.1;Parent=gene-LDO49_RS22135;Dbxref=GenBank:WP_060074337.1;Name=WP_060074337.1;Ontology_term=GO:0019636,GO:0047400;gbkey=CDS;gene=phnA;go_function=phosphonoacetate hydrolase activity|0047400||IEA;go_process=phosphonoacetate metabolic process|0019636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546901.1;locus_tag=LDO49_RS22135;product=phosphonoacetate hydrolase;protein_id=WP_060074337.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 3726 4586 . - . ID=gene-LDO49_RS22140;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=LDO49_RS22140;old_locus_tag=BCEP4_340004 NZ_CAJZAV010000240.1 Protein Homology CDS 3726 4586 . - 0 ID=cds-WP_060074338.1;Parent=gene-LDO49_RS22140;Dbxref=GenBank:WP_060074338.1;Name=WP_060074338.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756345.1;locus_tag=LDO49_RS22140;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WP_060074338.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 4576 5496 . - . ID=gene-LDO49_RS22145;Name=LDO49_RS22145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22145;old_locus_tag=BCEP4_340005 NZ_CAJZAV010000240.1 Protein Homology CDS 4576 5496 . - 0 ID=cds-WP_021159317.1;Parent=gene-LDO49_RS22145;Dbxref=GenBank:WP_021159317.1;Name=WP_021159317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414767.1;locus_tag=LDO49_RS22145;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_021159317.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 5474 6577 . - . ID=gene-LDO49_RS22150;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=LDO49_RS22150;old_locus_tag=BCEP4_340006 NZ_CAJZAV010000240.1 Protein Homology CDS 5474 6577 . - 0 ID=cds-WP_048020819.1;Parent=gene-LDO49_RS22150;Dbxref=GenBank:WP_048020819.1;Name=WP_048020819.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014901035.1;locus_tag=LDO49_RS22150;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_048020819.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 6612 7700 . - . ID=gene-LDO49_RS22155;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=LDO49_RS22155;old_locus_tag=BCEP4_340007 NZ_CAJZAV010000240.1 Protein Homology CDS 6612 7700 . - 0 ID=cds-WP_021159315.1;Parent=gene-LDO49_RS22155;Dbxref=GenBank:WP_021159315.1;Name=WP_021159315.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406893.1;locus_tag=LDO49_RS22155;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_021159315.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 7959 9068 . + . ID=gene-LDO49_RS22160;Name=LDO49_RS22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22160;old_locus_tag=BCEP4_340008 NZ_CAJZAV010000240.1 Protein Homology CDS 7959 9068 . + 0 ID=cds-WP_124841387.1;Parent=gene-LDO49_RS22160;Dbxref=GenBank:WP_124841387.1;Name=WP_124841387.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546896.1;locus_tag=LDO49_RS22160;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_124841387.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 9157 10497 . - . ID=gene-LDO49_RS22165;Name=LDO49_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22165;old_locus_tag=BCEP4_340009 NZ_CAJZAV010000240.1 Protein Homology CDS 9157 10497 . - 0 ID=cds-WP_048020813.1;Parent=gene-LDO49_RS22165;Dbxref=GenBank:WP_048020813.1;Name=WP_048020813.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480491.1;locus_tag=LDO49_RS22165;product=MFS transporter;protein_id=WP_048020813.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 10540 11394 . - . ID=gene-LDO49_RS22170;Name=LDO49_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22170;old_locus_tag=BCEP4_340010 NZ_CAJZAV010000240.1 Protein Homology CDS 10540 11394 . - 0 ID=cds-WP_048020812.1;Parent=gene-LDO49_RS22170;Dbxref=GenBank:WP_048020812.1;Name=WP_048020812.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602966.1;locus_tag=LDO49_RS22170;product=shikimate dehydrogenase;protein_id=WP_048020812.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 11391 11846 . - . ID=gene-LDO49_RS22175;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=LDO49_RS22175;old_locus_tag=BCEP4_340011 NZ_CAJZAV010000240.1 Protein Homology CDS 11391 11846 . - 0 ID=cds-WP_021159313.1;Parent=gene-LDO49_RS22175;Dbxref=GenBank:WP_021159313.1;Name=WP_021159313.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216377.1;locus_tag=LDO49_RS22175;product=type II 3-dehydroquinate dehydratase;protein_id=WP_021159313.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 12104 13996 . + . ID=gene-LDO49_RS22180;Name=LDO49_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22180;old_locus_tag=BCEP4_340012 NZ_CAJZAV010000240.1 Protein Homology CDS 12104 13996 . + 0 ID=cds-WP_021159312.1;Parent=gene-LDO49_RS22180;Dbxref=GenBank:WP_021159312.1;Name=WP_021159312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546893.1;locus_tag=LDO49_RS22180;product=bifunctional sugar phosphate isomerase/epimerase/4-hydroxyphenylpyruvate dioxygenase family protein;protein_id=WP_021159312.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 14285 14548 . + . ID=gene-LDO49_RS22185;Name=LDO49_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22185;old_locus_tag=BCEP4_340014 NZ_CAJZAV010000240.1 Protein Homology CDS 14285 14548 . + 0 ID=cds-WP_021159311.1;Parent=gene-LDO49_RS22185;Dbxref=GenBank:WP_021159311.1;Name=WP_021159311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756354.1;locus_tag=LDO49_RS22185;product=hypothetical protein;protein_id=WP_021159311.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 14627 15421 . - . ID=gene-LDO49_RS22190;Name=LDO49_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22190;old_locus_tag=BCEP4_340015 NZ_CAJZAV010000240.1 Protein Homology CDS 14627 15421 . - 0 ID=cds-WP_021159310.1;Parent=gene-LDO49_RS22190;Dbxref=GenBank:WP_021159310.1;Name=WP_021159310.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880903.1;locus_tag=LDO49_RS22190;product=AraC family transcriptional regulator;protein_id=WP_021159310.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 16137 17273 . + . ID=gene-LDO49_RS22195;Name=LDO49_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22195;old_locus_tag=BCEP4_340017 NZ_CAJZAV010000240.1 Protein Homology CDS 16137 17273 . + 0 ID=cds-WP_021159308.1;Parent=gene-LDO49_RS22195;Dbxref=GenBank:WP_021159308.1;Name=WP_021159308.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406882.1;locus_tag=LDO49_RS22195;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_021159308.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 17598 18908 . + . ID=gene-LDO49_RS22200;Name=LDO49_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22200;old_locus_tag=BCEP4_340018 NZ_CAJZAV010000240.1 Protein Homology CDS 17598 18908 . + 0 ID=cds-WP_048023374.1;Parent=gene-LDO49_RS22200;Dbxref=GenBank:WP_048023374.1;Name=WP_048023374.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494264.1;locus_tag=LDO49_RS22200;product=MFS transporter;protein_id=WP_048023374.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 19016 19453 . - . ID=gene-LDO49_RS22205;Name=LDO49_RS22205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22205;old_locus_tag=BCEP4_340019 NZ_CAJZAV010000240.1 Protein Homology CDS 19016 19453 . - 0 ID=cds-WP_021159306.1;Parent=gene-LDO49_RS22205;Dbxref=GenBank:WP_021159306.1;Name=WP_021159306.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604064.1;locus_tag=LDO49_RS22205;product=DoxX family protein;protein_id=WP_021159306.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 19646 20101 . - . ID=gene-LDO49_RS22210;Name=LDO49_RS22210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22210;old_locus_tag=BCEP4_340020 NZ_CAJZAV010000240.1 Protein Homology CDS 19646 20101 . - 0 ID=cds-WP_021159305.1;Parent=gene-LDO49_RS22210;Dbxref=GenBank:WP_021159305.1;Name=WP_021159305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353949.1;locus_tag=LDO49_RS22210;product=RbsD/FucU family protein;protein_id=WP_021159305.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 20181 20582 . - . ID=gene-LDO49_RS22215;Name=LDO49_RS22215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22215;old_locus_tag=BCEP4_340021 NZ_CAJZAV010000240.1 Protein Homology CDS 20181 20582 . - 0 ID=cds-WP_048023376.1;Parent=gene-LDO49_RS22215;Dbxref=GenBank:WP_048023376.1;Name=WP_048023376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752323.1;locus_tag=LDO49_RS22215;product=nuclear transport factor 2 family protein;protein_id=WP_048023376.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 20721 22235 . - . ID=gene-LDO49_RS22220;Name=LDO49_RS22220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22220;old_locus_tag=BCEP4_340022 NZ_CAJZAV010000240.1 Protein Homology CDS 20721 22235 . - 0 ID=cds-WP_224052352.1;Parent=gene-LDO49_RS22220;Dbxref=GenBank:WP_224052352.1;Name=WP_224052352.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339371.1;locus_tag=LDO49_RS22220;product=aminotransferase class IV;protein_id=WP_224052352.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 22232 23383 . - . ID=gene-LDO49_RS22225;Name=LDO49_RS22225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22225;old_locus_tag=BCEP4_340023 NZ_CAJZAV010000240.1 Protein Homology CDS 22232 23383 . - 0 ID=cds-WP_224052353.1;Parent=gene-LDO49_RS22225;Dbxref=GenBank:WP_224052353.1;Name=WP_224052353.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339370.1;locus_tag=LDO49_RS22225;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_224052353.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 23510 23992 . + . ID=gene-LDO49_RS22230;Name=LDO49_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22230;old_locus_tag=BCEP4_340024 NZ_CAJZAV010000240.1 Protein Homology CDS 23510 23992 . + 0 ID=cds-WP_042974910.1;Parent=gene-LDO49_RS22230;Dbxref=GenBank:WP_042974910.1;Name=WP_042974910.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546883.1;locus_tag=LDO49_RS22230;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_042974910.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 24059 25612 . - . ID=gene-LDO49_RS22235;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=LDO49_RS22235;old_locus_tag=BCEP4_340025 NZ_CAJZAV010000240.1 Protein Homology CDS 24059 25612 . - 0 ID=cds-WP_021159302.1;Parent=gene-LDO49_RS22235;Dbxref=GenBank:WP_021159302.1;Name=WP_021159302.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756361.1;locus_tag=LDO49_RS22235;product=galactarate dehydratase;protein_id=WP_021159302.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 25841 26755 . + . ID=gene-LDO49_RS22240;Name=kdgD;gbkey=Gene;gene=kdgD;gene_biotype=protein_coding;locus_tag=LDO49_RS22240;old_locus_tag=BCEP4_340026 NZ_CAJZAV010000240.1 Protein Homology CDS 25841 26755 . + 0 ID=cds-WP_048023382.1;Parent=gene-LDO49_RS22240;Dbxref=GenBank:WP_048023382.1;Name=WP_048023382.1;Ontology_term=GO:0016052,GO:0047448;gbkey=CDS;gene=kdgD;go_function=5-dehydro-4-deoxyglucarate dehydratase activity|0047448||IEA;go_process=carbohydrate catabolic process|0016052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094246.1;locus_tag=LDO49_RS22240;product=5-dehydro-4-deoxyglucarate dehydratase;protein_id=WP_048023382.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 26938 27489 . - . ID=gene-LDO49_RS22245;Name=LDO49_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22245;old_locus_tag=BCEP4_340027 NZ_CAJZAV010000240.1 Protein Homology CDS 26938 27489 . - 0 ID=cds-WP_021159300.1;Parent=gene-LDO49_RS22245;Dbxref=GenBank:WP_021159300.1;Name=WP_021159300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752327.1;locus_tag=LDO49_RS22245;product=hypothetical protein;protein_id=WP_021159300.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 27825 29402 . - . ID=gene-LDO49_RS22250;Name=LDO49_RS22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22250;old_locus_tag=BCEP4_340029 NZ_CAJZAV010000240.1 Protein Homology CDS 27825 29402 . - 0 ID=cds-WP_060074347.1;Parent=gene-LDO49_RS22250;Dbxref=GenBank:WP_060074347.1;Name=WP_060074347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406866.1;locus_tag=LDO49_RS22250;product=aldehyde dehydrogenase (NADP(+));protein_id=WP_060074347.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 29648 31027 . + . ID=gene-LDO49_RS22255;Name=LDO49_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22255;old_locus_tag=BCEP4_340030 NZ_CAJZAV010000240.1 Protein Homology CDS 29648 31027 . + 0 ID=cds-WP_060074348.1;Parent=gene-LDO49_RS22255;Dbxref=GenBank:WP_060074348.1;Name=WP_060074348.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546878.1;locus_tag=LDO49_RS22255;product=MFS transporter;protein_id=WP_060074348.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 31093 31818 . - . ID=gene-LDO49_RS22260;Name=LDO49_RS22260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22260;old_locus_tag=BCEP4_340031 NZ_CAJZAV010000240.1 Protein Homology CDS 31093 31818 . - 0 ID=cds-WP_021159298.1;Parent=gene-LDO49_RS22260;Dbxref=GenBank:WP_021159298.1;Name=WP_021159298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752332.1;locus_tag=LDO49_RS22260;product=site-2 protease family protein;protein_id=WP_021159298.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 31815 32777 . - . ID=gene-LDO49_RS22265;Name=LDO49_RS22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22265;old_locus_tag=BCEP4_340032 NZ_CAJZAV010000240.1 Protein Homology CDS 31815 32777 . - 0 ID=cds-WP_042974906.1;Parent=gene-LDO49_RS22265;Dbxref=GenBank:WP_042974906.1;Name=WP_042974906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752333.1;locus_tag=LDO49_RS22265;product=DUF2167 domain-containing protein;protein_id=WP_042974906.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 32972 33820 . + . ID=gene-LDO49_RS22270;Name=LDO49_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22270;old_locus_tag=BCEP4_340033 NZ_CAJZAV010000240.1 Protein Homology CDS 32972 33820 . + 0 ID=cds-WP_060074349.1;Parent=gene-LDO49_RS22270;Dbxref=GenBank:WP_060074349.1;Name=WP_060074349.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659640.1;locus_tag=LDO49_RS22270;product=helix-turn-helix domain-containing protein;protein_id=WP_060074349.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 34208 36061 . + . ID=gene-LDO49_RS22275;Name=LDO49_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22275;old_locus_tag=BCEP4_340034 NZ_CAJZAV010000240.1 Protein Homology CDS 34208 36061 . + 0 ID=cds-WP_060074350.1;Parent=gene-LDO49_RS22275;Dbxref=GenBank:WP_060074350.1;Name=WP_060074350.1;Ontology_term=GO:0007155,GO:0015031;gbkey=CDS;go_process=cell adhesion|0007155||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353937.1;locus_tag=LDO49_RS22275;product=YadA family autotransporter adhesin;protein_id=WP_060074350.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 36227 36853 . - . ID=gene-LDO49_RS22280;Name=LDO49_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22280;old_locus_tag=BCEP4_340035 NZ_CAJZAV010000240.1 Protein Homology CDS 36227 36853 . - 0 ID=cds-WP_042974904.1;Parent=gene-LDO49_RS22280;Dbxref=GenBank:WP_042974904.1;Name=WP_042974904.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494256.1;locus_tag=LDO49_RS22280;product=LysE family translocator;protein_id=WP_042974904.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 37009 37473 . + . ID=gene-LDO49_RS22285;Name=LDO49_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22285;old_locus_tag=BCEP4_340036 NZ_CAJZAV010000240.1 Protein Homology CDS 37009 37473 . + 0 ID=cds-WP_060074351.1;Parent=gene-LDO49_RS22285;Dbxref=GenBank:WP_060074351.1;Name=WP_060074351.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014901010.1;locus_tag=LDO49_RS22285;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_060074351.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 37470 38846 . - . ID=gene-LDO49_RS22290;Name=LDO49_RS22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22290;old_locus_tag=BCEP4_340037 NZ_CAJZAV010000240.1 Protein Homology CDS 37470 38846 . - 0 ID=cds-WP_060074352.1;Parent=gene-LDO49_RS22290;Dbxref=GenBank:WP_060074352.1;Name=WP_060074352.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353934.1;locus_tag=LDO49_RS22290;product=dihydroorotase;protein_id=WP_060074352.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 38850 39410 . - . ID=gene-LDO49_RS22295;Name=LDO49_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22295;old_locus_tag=BCEP4_340038 NZ_CAJZAV010000240.1 Protein Homology CDS 38850 39410 . - 0 ID=cds-WP_059487394.1;Parent=gene-LDO49_RS22295;Dbxref=GenBank:WP_059487394.1;Name=WP_059487394.1;Ontology_term=GO:0004089,GO:0046872;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006390368.1;locus_tag=LDO49_RS22295;product=gamma carbonic anhydrase family protein;protein_id=WP_059487394.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 39410 39988 . - . ID=gene-LDO49_RS22300;Name=LDO49_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22300;old_locus_tag=BCEP4_340039 NZ_CAJZAV010000240.1 Protein Homology CDS 39410 39988 . - 0 ID=cds-WP_060074353.1;Parent=gene-LDO49_RS22300;Dbxref=GenBank:WP_060074353.1;Name=WP_060074353.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339358.1;locus_tag=LDO49_RS22300;product=6-pyruvoyl trahydropterin synthase family protein;protein_id=WP_060074353.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 39982 40902 . - . ID=gene-LDO49_RS22305;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=LDO49_RS22305;old_locus_tag=BCEP4_340040 NZ_CAJZAV010000240.1 Protein Homology CDS 39982 40902 . - 0 ID=cds-WP_060074541.1;Parent=gene-LDO49_RS22305;Dbxref=GenBank:WP_060074541.1;Name=WP_060074541.1;Ontology_term=GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491344.1;locus_tag=LDO49_RS22305;product=GTP cyclohydrolase FolE2;protein_id=WP_060074541.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 40961 42169 . - . ID=gene-LDO49_RS22310;Name=zigA;gbkey=Gene;gene=zigA;gene_biotype=protein_coding;locus_tag=LDO49_RS22310;old_locus_tag=BCEP4_340041 NZ_CAJZAV010000240.1 Protein Homology CDS 40961 42169 . - 0 ID=cds-WP_185633965.1;Parent=gene-LDO49_RS22310;Dbxref=GenBank:WP_185633965.1;Name=WP_185633965.1;gbkey=CDS;gene=zigA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339356.1;locus_tag=LDO49_RS22310;product=zinc metallochaperone GTPase ZigA;protein_id=WP_185633965.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 42305 43516 . - . ID=gene-LDO49_RS22315;Name=LDO49_RS22315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22315;old_locus_tag=BCEP4_340042 NZ_CAJZAV010000240.1 Protein Homology CDS 42305 43516 . - 0 ID=cds-WP_124475865.1;Parent=gene-LDO49_RS22315;Dbxref=GenBank:WP_124475865.1;Name=WP_124475865.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014901008.1;locus_tag=LDO49_RS22315;product=acyl-CoA dehydrogenase family protein;protein_id=WP_124475865.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 43513 44364 . - . ID=gene-LDO49_RS22320;Name=LDO49_RS22320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22320;old_locus_tag=BCEP4_340043 NZ_CAJZAV010000240.1 Protein Homology CDS 43513 44364 . - 0 ID=cds-WP_060074356.1;Parent=gene-LDO49_RS22320;Dbxref=GenBank:WP_060074356.1;Name=WP_060074356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494248.1;locus_tag=LDO49_RS22320;product=hypothetical protein;protein_id=WP_060074356.1;transl_table=11 NZ_CAJZAV010000240.1 RefSeq gene 44419 45075 . - . ID=gene-LDO49_RS22325;Name=LDO49_RS22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22325;old_locus_tag=BCEP4_340044 NZ_CAJZAV010000240.1 Protein Homology CDS 44419 45075 . - 0 ID=cds-WP_027790485.1;Parent=gene-LDO49_RS22325;Dbxref=GenBank:WP_027790485.1;Name=WP_027790485.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491339.1;locus_tag=LDO49_RS22325;product=methionine ABC transporter permease;protein_id=WP_027790485.1;transl_table=11 ##sequence-region NZ_CAJZAV010000241.1 1 47708 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000241.1 RefSeq region 1 47708 . + . ID=NZ_CAJZAV010000241.1:1..47708;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_35 NZ_CAJZAV010000241.1 RefSeq gene 93 1448 . - . ID=gene-LDO49_RS22330;Name=LDO49_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22330;old_locus_tag=BCEP4_350002 NZ_CAJZAV010000241.1 Protein Homology CDS 93 1448 . - 0 ID=cds-WP_059857292.1;Parent=gene-LDO49_RS22330;Dbxref=GenBank:WP_059857292.1;Name=WP_059857292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496047.1;locus_tag=LDO49_RS22330;product=polyhydroxyalkanoate depolymerase;protein_id=WP_059857292.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 1737 2399 . + . ID=gene-LDO49_RS22335;Name=LDO49_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22335;old_locus_tag=BCEP4_350001 NZ_CAJZAV010000241.1 Protein Homology CDS 1737 2399 . + 0 ID=cds-WP_021157324.1;Parent=gene-LDO49_RS22335;Dbxref=GenBank:WP_021157324.1;Name=WP_021157324.1;Ontology_term=GO:0006749,GO:0004364;gbkey=CDS;go_function=glutathione transferase activity|0004364||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752610.1;locus_tag=LDO49_RS22335;product=glutathione S-transferase family protein;protein_id=WP_021157324.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 2637 3881 . + . ID=gene-LDO49_RS22340;Name=LDO49_RS22340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22340;old_locus_tag=BCEP4_350003 NZ_CAJZAV010000241.1 Protein Homology CDS 2637 3881 . + 0 ID=cds-WP_048022418.1;Parent=gene-LDO49_RS22340;Dbxref=GenBank:WP_048022418.1;Name=WP_048022418.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484345.1;locus_tag=LDO49_RS22340;product=Crp/Fnr family transcriptional regulator;protein_id=WP_048022418.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 3897 4661 . + . ID=gene-LDO49_RS22345;Name=LDO49_RS22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22345;old_locus_tag=BCEP4_350004 NZ_CAJZAV010000241.1 Protein Homology CDS 3897 4661 . + 0 ID=cds-WP_124841710.1;Parent=gene-LDO49_RS22345;Dbxref=GenBank:WP_124841710.1;Name=WP_124841710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397961.1;locus_tag=LDO49_RS22345;product=flagellar motor protein;protein_id=WP_124841710.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 4701 5366 . + . ID=gene-LDO49_RS22350;Name=LDO49_RS22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22350;old_locus_tag=BCEP4_350005 NZ_CAJZAV010000241.1 Protein Homology CDS 4701 5366 . + 0 ID=cds-WP_224052354.1;Parent=gene-LDO49_RS22350;Dbxref=GenBank:WP_224052354.1;Name=WP_224052354.1;Ontology_term=GO:0015288,GO:0042834;gbkey=CDS;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338547.1;locus_tag=LDO49_RS22350;product=OmpA/MotB family protein;protein_id=WP_224052354.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 5525 7387 . + . ID=gene-LDO49_RS22355;Name=LDO49_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22355;old_locus_tag=BCEP4_350006 NZ_CAJZAV010000241.1 Protein Homology CDS 5525 7387 . + 0 ID=cds-WP_059706481.1;Parent=gene-LDO49_RS22355;Dbxref=GenBank:WP_059706481.1;Name=WP_059706481.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217528.1;locus_tag=LDO49_RS22355;product=methyl-accepting chemotaxis protein;protein_id=WP_059706481.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 7492 8280 . + . ID=gene-LDO49_RS22360;Name=LDO49_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22360;old_locus_tag=BCEP4_350007 NZ_CAJZAV010000241.1 Protein Homology CDS 7492 8280 . + 0 ID=cds-WP_059493619.1;Parent=gene-LDO49_RS22360;Dbxref=GenBank:WP_059493619.1;Name=WP_059493619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900164.1;locus_tag=LDO49_RS22360;product=hypothetical protein;protein_id=WP_059493619.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 8462 8917 . + . ID=gene-LDO49_RS22365;Name=LDO49_RS22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22365;old_locus_tag=BCEP4_350008 NZ_CAJZAV010000241.1 Protein Homology CDS 8462 8917 . + 0 ID=cds-WP_224052355.1;Parent=gene-LDO49_RS22365;Dbxref=GenBank:WP_224052355.1;Name=WP_224052355.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012748099.1;locus_tag=LDO49_RS22365;product=GNAT family N-acetyltransferase;protein_id=WP_224052355.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 9184 9387 . + . ID=gene-LDO49_RS22370;Name=LDO49_RS22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22370;old_locus_tag=BCEP4_350009 NZ_CAJZAV010000241.1 Protein Homology CDS 9184 9387 . + 0 ID=cds-WP_006485974.1;Parent=gene-LDO49_RS22370;Dbxref=GenBank:WP_006485974.1;Name=WP_006485974.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014252848.1;locus_tag=LDO49_RS22370;product=cold-shock protein;protein_id=WP_006485974.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 9668 9892 . + . ID=gene-LDO49_RS22375;Name=LDO49_RS22375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22375;old_locus_tag=BCEP4_350010 NZ_CAJZAV010000241.1 Protein Homology CDS 9668 9892 . + 0 ID=cds-WP_021157316.1;Parent=gene-LDO49_RS22375;Dbxref=GenBank:WP_021157316.1;Name=WP_021157316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011490588.1;locus_tag=LDO49_RS22375;product=hypothetical protein;protein_id=WP_021157316.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 10218 10628 . + . ID=gene-LDO49_RS22380;Name=LDO49_RS22380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22380;old_locus_tag=BCEP4_350011 NZ_CAJZAV010000241.1 Protein Homology CDS 10218 10628 . + 0 ID=cds-WP_048022468.1;Parent=gene-LDO49_RS22380;Dbxref=GenBank:WP_048022468.1;Name=WP_048022468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660397.1;locus_tag=LDO49_RS22380;product=TIGR02594 family protein;protein_id=WP_048022468.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 10773 11405 . + . ID=gene-LDO49_RS22385;Name=yfcF;gbkey=Gene;gene=yfcF;gene_biotype=protein_coding;locus_tag=LDO49_RS22385;old_locus_tag=BCEP4_350012 NZ_CAJZAV010000241.1 Protein Homology CDS 10773 11405 . + 0 ID=cds-WP_224052356.1;Parent=gene-LDO49_RS22385;Dbxref=GenBank:WP_224052356.1;Name=WP_224052356.1;Ontology_term=GO:0006749;gbkey=CDS;gene=yfcF;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355941.1;locus_tag=LDO49_RS22385;product=glutathione transferase;protein_id=WP_224052356.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 11553 12176 . + . ID=gene-LDO49_RS22390;Name=LDO49_RS22390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22390;old_locus_tag=BCEP4_350013 NZ_CAJZAV010000241.1 Protein Homology CDS 11553 12176 . + 0 ID=cds-WP_059484131.1;Parent=gene-LDO49_RS22390;Dbxref=GenBank:WP_059484131.1;Name=WP_059484131.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416813.1;locus_tag=LDO49_RS22390;product=LysE family transporter;protein_id=WP_059484131.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 12184 12366 . + . ID=gene-LDO49_RS22395;Name=LDO49_RS22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22395;old_locus_tag=BCEP4_350014 NZ_CAJZAV010000241.1 GeneMarkS-2+ CDS 12184 12366 . + 0 ID=cds-WP_021157313.1;Parent=gene-LDO49_RS22395;Dbxref=GenBank:WP_021157313.1;Name=WP_021157313.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS22395;product=hypothetical protein;protein_id=WP_021157313.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 12417 13853 . - . ID=gene-LDO49_RS22400;Name=LDO49_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22400;old_locus_tag=BCEP4_350015 NZ_CAJZAV010000241.1 Protein Homology CDS 12417 13853 . - 0 ID=cds-WP_224052357.1;Parent=gene-LDO49_RS22400;Dbxref=GenBank:WP_224052357.1;Name=WP_224052357.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479568.1;locus_tag=LDO49_RS22400;product=efflux transporter outer membrane subunit;protein_id=WP_224052357.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 13870 15444 . - . ID=gene-LDO49_RS22405;Name=LDO49_RS22405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22405;old_locus_tag=BCEP4_350016 NZ_CAJZAV010000241.1 Protein Homology CDS 13870 15444 . - 0 ID=cds-WP_059484128.1;Parent=gene-LDO49_RS22405;Dbxref=GenBank:WP_059484128.1;Name=WP_059484128.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338532.1;locus_tag=LDO49_RS22405;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_059484128.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 15458 16552 . - . ID=gene-LDO49_RS22410;Name=LDO49_RS22410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22410;old_locus_tag=BCEP4_350017 NZ_CAJZAV010000241.1 Protein Homology CDS 15458 16552 . - 0 ID=cds-WP_059493614.1;Parent=gene-LDO49_RS22410;Dbxref=GenBank:WP_059493614.1;Name=WP_059493614.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750286.1;locus_tag=LDO49_RS22410;product=HlyD family secretion protein;protein_id=WP_059493614.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 16621 17052 . - . ID=gene-LDO49_RS22415;Name=LDO49_RS22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22415;old_locus_tag=BCEP4_350018 NZ_CAJZAV010000241.1 Protein Homology CDS 16621 17052 . - 0 ID=cds-WP_059649132.1;Parent=gene-LDO49_RS22415;Dbxref=GenBank:WP_059649132.1;Name=WP_059649132.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496031.1;locus_tag=LDO49_RS22415;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059649132.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 17160 18080 . - . ID=gene-LDO49_RS22420;Name=LDO49_RS22420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22420;old_locus_tag=BCEP4_350019 NZ_CAJZAV010000241.1 Protein Homology CDS 17160 18080 . - 0 ID=cds-WP_021157308.1;Parent=gene-LDO49_RS22420;Dbxref=GenBank:WP_021157308.1;Name=WP_021157308.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900150.1;locus_tag=LDO49_RS22420;product=LysR family transcriptional regulator;protein_id=WP_021157308.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 18172 18600 . + . ID=gene-LDO49_RS22425;Name=LDO49_RS22425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22425;old_locus_tag=BCEP4_350020 NZ_CAJZAV010000241.1 Protein Homology CDS 18172 18600 . + 0 ID=cds-WP_059675073.1;Parent=gene-LDO49_RS22425;Dbxref=GenBank:WP_059675073.1;Name=WP_059675073.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338528.1;locus_tag=LDO49_RS22425;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059675073.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 18786 20033 . + . ID=gene-LDO49_RS22430;Name=LDO49_RS22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22430;old_locus_tag=BCEP4_350021 NZ_CAJZAV010000241.1 Protein Homology CDS 18786 20033 . + 0 ID=cds-WP_059622283.1;Parent=gene-LDO49_RS22430;Dbxref=GenBank:WP_059622283.1;Name=WP_059622283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330295.1;locus_tag=LDO49_RS22430;product=aconitase X;protein_id=WP_059622283.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 20026 20481 . + . ID=gene-LDO49_RS22435;Name=LDO49_RS22435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22435;old_locus_tag=BCEP4_350022 NZ_CAJZAV010000241.1 Protein Homology CDS 20026 20481 . + 0 ID=cds-WP_059591659.1;Parent=gene-LDO49_RS22435;Dbxref=GenBank:WP_059591659.1;Name=WP_059591659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761423.1;locus_tag=LDO49_RS22435;product=aconitase X swivel domain-containing protein;protein_id=WP_059591659.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 20511 21113 . - . ID=gene-LDO49_RS22440;Name=LDO49_RS22440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22440;old_locus_tag=BCEP4_350023 NZ_CAJZAV010000241.1 Protein Homology CDS 20511 21113 . - 0 ID=cds-WP_224052358.1;Parent=gene-LDO49_RS22440;Dbxref=GenBank:WP_224052358.1;Name=WP_224052358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338525.1;locus_tag=LDO49_RS22440;product=hypothetical protein;protein_id=WP_224052358.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 21110 21655 . - . ID=gene-LDO49_RS22445;Name=LDO49_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22445;old_locus_tag=BCEP4_350024 NZ_CAJZAV010000241.1 Protein Homology CDS 21110 21655 . - 0 ID=cds-WP_224052359.1;Parent=gene-LDO49_RS22445;Dbxref=GenBank:WP_224052359.1;Name=WP_224052359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900145.1;locus_tag=LDO49_RS22445;product=hypothetical protein;protein_id=WP_224052359.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 21753 22835 . - . ID=gene-LDO49_RS22450;Name=LDO49_RS22450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22450;old_locus_tag=BCEP4_350025 NZ_CAJZAV010000241.1 Protein Homology CDS 21753 22835 . - 0 ID=cds-WP_224052360.1;Parent=gene-LDO49_RS22450;Dbxref=GenBank:WP_224052360.1;Name=WP_224052360.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660406.1;locus_tag=LDO49_RS22450;product=AraC family transcriptional regulator;protein_id=WP_224052360.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 22911 24944 . + . ID=gene-LDO49_RS22455;Name=LDO49_RS22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22455;old_locus_tag=BCEP4_350026 NZ_CAJZAV010000241.1 Protein Homology CDS 22911 24944 . + 0 ID=cds-WP_224052361.1;Parent=gene-LDO49_RS22455;Dbxref=GenBank:WP_224052361.1;Name=WP_224052361.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544654.1;locus_tag=LDO49_RS22455;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_224052361.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 24969 25379 . - . ID=gene-LDO49_RS22460;Name=LDO49_RS22460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22460;old_locus_tag=BCEP4_350027 NZ_CAJZAV010000241.1 Protein Homology CDS 24969 25379 . - 0 ID=cds-WP_027790981.1;Parent=gene-LDO49_RS22460;Dbxref=GenBank:WP_027790981.1;Name=WP_027790981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881486.1;locus_tag=LDO49_RS22460;product=DUF2471 family protein;protein_id=WP_027790981.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 25518 26411 . - . ID=gene-LDO49_RS22465;Name=LDO49_RS22465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22465;old_locus_tag=BCEP4_350028 NZ_CAJZAV010000241.1 Protein Homology CDS 25518 26411 . - 0 ID=cds-WP_224052362.1;Parent=gene-LDO49_RS22465;Dbxref=GenBank:WP_224052362.1;Name=WP_224052362.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484342.1;locus_tag=LDO49_RS22465;product=LysR family transcriptional regulator;protein_id=WP_224052362.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 26498 27280 . + . ID=gene-LDO49_RS22470;Name=LDO49_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22470;old_locus_tag=BCEP4_350029 NZ_CAJZAV010000241.1 Protein Homology CDS 26498 27280 . + 0 ID=cds-WP_224052363.1;Parent=gene-LDO49_RS22470;Dbxref=GenBank:WP_224052363.1;Name=WP_224052363.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330288.1;locus_tag=LDO49_RS22470;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_224052363.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 27491 27781 . - . ID=gene-LDO49_RS22475;Name=catC;gbkey=Gene;gene=catC;gene_biotype=protein_coding;locus_tag=LDO49_RS22475;old_locus_tag=BCEP4_350030 NZ_CAJZAV010000241.1 Protein Homology CDS 27491 27781 . - 0 ID=cds-WP_021157297.1;Parent=gene-LDO49_RS22475;Dbxref=GenBank:WP_021157297.1;Name=WP_021157297.1;Ontology_term=GO:0042952,GO:0016159;gbkey=CDS;gene=catC;go_function=muconolactone delta-isomerase activity|0016159||IEA;go_process=beta-ketoadipate pathway|0042952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009895466.1;locus_tag=LDO49_RS22475;product=muconolactone Delta-isomerase;protein_id=WP_021157297.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 27825 28727 . - . ID=gene-LDO49_RS22480;Name=catA;gbkey=Gene;gene=catA;gene_biotype=protein_coding;locus_tag=LDO49_RS22480;old_locus_tag=BCEP4_350031 NZ_CAJZAV010000241.1 Protein Homology CDS 27825 28727 . - 0 ID=cds-WP_042973294.1;Parent=gene-LDO49_RS22480;Dbxref=GenBank:WP_042973294.1;Name=WP_042973294.1;Ontology_term=GO:0019615,GO:0005506,GO:0018576;gbkey=CDS;gene=catA;go_function=iron ion binding|0005506||IEA,catechol 1%2C2-dioxygenase activity|0018576||IEA;go_process=catechol catabolic process%2C ortho-cleavage|0019615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365533.1;locus_tag=LDO49_RS22480;product=catechol 1%2C2-dioxygenase;protein_id=WP_042973294.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 28759 29892 . - . ID=gene-LDO49_RS22485;Name=LDO49_RS22485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22485;old_locus_tag=BCEP4_350032 NZ_CAJZAV010000241.1 Protein Homology CDS 28759 29892 . - 0 ID=cds-WP_060071319.1;Parent=gene-LDO49_RS22485;Dbxref=GenBank:WP_060071319.1;Name=WP_060071319.1;Ontology_term=GO:0018849,GO:0018850,GO:0030145;gbkey=CDS;go_function=muconate cycloisomerase activity|0018849||IEA,chloromuconate cycloisomerase activity|0018850||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853729.1;locus_tag=LDO49_RS22485;product=muconate/chloromuconate family cycloisomerase;protein_id=WP_060071319.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 29984 30874 . + . ID=gene-LDO49_RS22490;Name=LDO49_RS22490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22490;old_locus_tag=BCEP4_350033 NZ_CAJZAV010000241.1 Protein Homology CDS 29984 30874 . + 0 ID=cds-WP_060071320.1;Parent=gene-LDO49_RS22490;Dbxref=GenBank:WP_060071320.1;Name=WP_060071320.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548240.1;locus_tag=LDO49_RS22490;product=LysR family transcriptional regulator;protein_id=WP_060071320.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 31084 32043 . - . ID=gene-LDO49_RS22495;Name=andR;gbkey=Gene;gene=andR;gene_biotype=protein_coding;locus_tag=LDO49_RS22495;old_locus_tag=BCEP4_350034 NZ_CAJZAV010000241.1 Protein Homology CDS 31084 32043 . - 0 ID=cds-WP_021157295.1;Parent=gene-LDO49_RS22495;Dbxref=GenBank:WP_021157295.1;Name=WP_021157295.1;Ontology_term=GO:0009056,GO:0003700,GO:0043565;gbkey=CDS;gene=andR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338516.1;locus_tag=LDO49_RS22495;product=anthranilate 1%2C2-dioxygenase regulatory protein AndR;protein_id=WP_021157295.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 32258 33529 . + . ID=gene-LDO49_RS22500;Name=andAc;gbkey=Gene;gene=andAc;gene_biotype=protein_coding;locus_tag=LDO49_RS22500;old_locus_tag=BCEP4_350035 NZ_CAJZAV010000241.1 Protein Homology CDS 32258 33529 . + 0 ID=cds-WP_059622368.1;Parent=gene-LDO49_RS22500;Dbxref=GenBank:WP_059622368.1;Name=WP_059622368.1;Ontology_term=GO:0009056,GO:0018618;gbkey=CDS;gene=andAc;go_function=anthranilate 1%2C2-dioxygenase (deaminating%2C decarboxylating) activity|0018618||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412648.1;locus_tag=LDO49_RS22500;product=anthranilate 1%2C2-dioxygenase large subunit AndAc;protein_id=WP_059622368.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 33547 34032 . + . ID=gene-LDO49_RS22505;Name=andAd;gbkey=Gene;gene=andAd;gene_biotype=protein_coding;locus_tag=LDO49_RS22505;old_locus_tag=BCEP4_350036 NZ_CAJZAV010000241.1 Protein Homology CDS 33547 34032 . + 0 ID=cds-WP_034196026.1;Parent=gene-LDO49_RS22505;Dbxref=GenBank:WP_034196026.1;Name=WP_034196026.1;Ontology_term=GO:0009056,GO:0018618;gbkey=CDS;gene=andAd;go_function=anthranilate 1%2C2-dioxygenase (deaminating%2C decarboxylating) activity|0018618||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881495.1;locus_tag=LDO49_RS22505;product=anthranilate 1%2C2-dioxygenase small subunit AndAd;protein_id=WP_034196026.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 34053 34379 . + . ID=gene-LDO49_RS22510;Name=andAb;gbkey=Gene;gene=andAb;gene_biotype=protein_coding;locus_tag=LDO49_RS22510;old_locus_tag=BCEP4_350037 NZ_CAJZAV010000241.1 Protein Homology CDS 34053 34379 . + 0 ID=cds-WP_006479527.1;Parent=gene-LDO49_RS22510;Dbxref=GenBank:WP_006479527.1;Name=WP_006479527.1;Ontology_term=GO:0009056,GO:0051537;gbkey=CDS;gene=andAb;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355916.1;locus_tag=LDO49_RS22510;product=anthranilate 1%2C2-dioxygenase ferredoxin subunit AndAb;protein_id=WP_006479527.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 34369 35589 . + . ID=gene-LDO49_RS22515;Name=andAa;gbkey=Gene;gene=andAa;gene_biotype=protein_coding;locus_tag=LDO49_RS22515;old_locus_tag=BCEP4_350038 NZ_CAJZAV010000241.1 Protein Homology CDS 34369 35589 . + 0 ID=cds-WP_224052364.1;Parent=gene-LDO49_RS22515;Dbxref=GenBank:WP_224052364.1;Name=WP_224052364.1;Ontology_term=GO:0009056,GO:0008860;gbkey=CDS;gene=andAa;go_function=ferredoxin-NAD+ reductase activity|0008860||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338514.1;locus_tag=LDO49_RS22515;product=anthranilate 1%2C2-dioxygenase system ferredoxin--NAD(+) reductase;protein_id=WP_224052364.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 35801 37087 . + . ID=gene-LDO49_RS22520;Name=LDO49_RS22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22520;old_locus_tag=BCEP4_350039 NZ_CAJZAV010000241.1 Protein Homology CDS 35801 37087 . + 0 ID=cds-WP_059484115.1;Parent=gene-LDO49_RS22520;Dbxref=GenBank:WP_059484115.1;Name=WP_059484115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338513.1;locus_tag=LDO49_RS22520;product=DUF445 domain-containing protein;protein_id=WP_059484115.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 37144 37443 . - . ID=gene-LDO49_RS22525;Name=LDO49_RS22525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22525;old_locus_tag=BCEP4_350040 NZ_CAJZAV010000241.1 Protein Homology CDS 37144 37443 . - 0 ID=cds-WP_060071322.1;Parent=gene-LDO49_RS22525;Dbxref=GenBank:WP_060071322.1;Name=WP_060071322.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089041.1;locus_tag=LDO49_RS22525;product=addiction module antidote protein;protein_id=WP_060071322.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 37447 37764 . - . ID=gene-LDO49_RS22530;Name=LDO49_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22530;old_locus_tag=BCEP4_350041 NZ_CAJZAV010000241.1 Protein Homology CDS 37447 37764 . - 0 ID=cds-WP_021157289.1;Parent=gene-LDO49_RS22530;Dbxref=GenBank:WP_021157289.1;Name=WP_021157289.1;Ontology_term=GO:0008219,GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724585.1;locus_tag=LDO49_RS22530;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_021157289.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 38125 39765 . + . ID=gene-LDO49_RS22535;Name=LDO49_RS22535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22535;old_locus_tag=BCEP4_350042 NZ_CAJZAV010000241.1 Protein Homology CDS 38125 39765 . + 0 ID=cds-WP_021157288.1;Parent=gene-LDO49_RS22535;Dbxref=GenBank:WP_021157288.1;Name=WP_021157288.1;Ontology_term=GO:0000287,GO:0003824,GO:0030976;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009978184.1;locus_tag=LDO49_RS22535;product=acetolactate synthase large subunit;protein_id=WP_021157288.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 39794 41227 . + . ID=gene-LDO49_RS22540;Name=LDO49_RS22540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22540;old_locus_tag=BCEP4_350043 NZ_CAJZAV010000241.1 Protein Homology CDS 39794 41227 . + 0 ID=cds-WP_059493603.1;Parent=gene-LDO49_RS22540;Dbxref=GenBank:WP_059493603.1;Name=WP_059493603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330254.1;locus_tag=LDO49_RS22540;product=aldehyde dehydrogenase family protein;protein_id=WP_059493603.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 41500 43083 . + . ID=gene-LDO49_RS22545;Name=LDO49_RS22545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22545;old_locus_tag=BCEP4_350044 NZ_CAJZAV010000241.1 Protein Homology CDS 41500 43083 . + 0 ID=cds-WP_021157285.1;Parent=gene-LDO49_RS22545;Dbxref=GenBank:WP_021157285.1;Name=WP_021157285.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365547.1;locus_tag=LDO49_RS22545;product=Na+/H+ antiporter;protein_id=WP_021157285.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 43566 44699 . + . ID=gene-LDO49_RS22550;Name=LDO49_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22550;old_locus_tag=BCEP4_350045 NZ_CAJZAV010000241.1 Protein Homology CDS 43566 44699 . + 0 ID=cds-WP_021157283.1;Parent=gene-LDO49_RS22550;Dbxref=GenBank:WP_021157283.1;Name=WP_021157283.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900125.1;locus_tag=LDO49_RS22550;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_021157283.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 44822 46498 . + . ID=gene-LDO49_RS22555;Name=LDO49_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22555;old_locus_tag=BCEP4_350046 NZ_CAJZAV010000241.1 Protein Homology CDS 44822 46498 . + 0 ID=cds-WP_224052366.1;Parent=gene-LDO49_RS22555;Dbxref=GenBank:WP_224052366.1;Name=WP_224052366.1;Ontology_term=GO:0006935;gbkey=CDS;go_process=chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404210.1;locus_tag=LDO49_RS22555;product=methyl-accepting chemotaxis protein;protein_id=WP_224052366.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 46495 47010 . + . ID=gene-LDO49_RS22560;Name=LDO49_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22560;old_locus_tag=BCEP4_350047 NZ_CAJZAV010000241.1 Protein Homology CDS 46495 47010 . + 0 ID=cds-WP_048022196.1;Parent=gene-LDO49_RS22560;Dbxref=GenBank:WP_048022196.1;Name=WP_048022196.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398020.1;locus_tag=LDO49_RS22560;product=chemotaxis protein CheW;protein_id=WP_048022196.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 47007 47452 . + . ID=gene-LDO49_RS38310;Name=LDO49_RS38310;end_range=47452,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38310;partial=true NZ_CAJZAV010000241.1 Protein Homology CDS 47007 47452 . + 0 ID=cds-WP_443798005.1;Parent=gene-LDO49_RS38310;Dbxref=GenBank:WP_443798005.1;Name=WP_443798005.1;end_range=47452,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493174.1;locus_tag=LDO49_RS38310;partial=true;product=CheR family methyltransferase;protein_id=WP_443798005.1;transl_table=11 NZ_CAJZAV010000241.1 RefSeq gene 47463 47708 . + . ID=gene-LDO49_RS38315;Name=LDO49_RS38315;end_range=47708,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38315;partial=true;start_range=.,47463 NZ_CAJZAV010000241.1 Protein Homology CDS 47463 47708 . + 2 ID=cds-WP_443798006.1;Parent=gene-LDO49_RS38315;Dbxref=GenBank:WP_443798006.1;Name=WP_443798006.1;end_range=47708,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404208.1;locus_tag=LDO49_RS38315;partial=true;product=CheR family methyltransferase;protein_id=WP_443798006.1;start_range=.,47463;transl_table=11 ##sequence-region NZ_CAJZAV010000242.1 1 10839 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000242.1 RefSeq region 1 10839 . + . ID=NZ_CAJZAV010000242.1:1..10839;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_36 NZ_CAJZAV010000242.1 RefSeq pseudogene 1 534 . + . ID=gene-LDO49_RS22570;Name=LDO49_RS22570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS22570;old_locus_tag=BCEP4_360001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000242.1 Protein Homology CDS 1 534 . + 0 ID=cds-LDO49_RS22570;Parent=gene-LDO49_RS22570;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011807615.1;locus_tag=LDO49_RS22570;partial=true;product=DNA polymerase Y family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000242.1 RefSeq gene 541 3744 . + . ID=gene-LDO49_RS22575;Name=LDO49_RS22575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22575;old_locus_tag=BCEP4_360002 NZ_CAJZAV010000242.1 Protein Homology CDS 541 3744 . + 0 ID=cds-WP_060073161.1;Parent=gene-LDO49_RS22575;Dbxref=GenBank:WP_060073161.1;Name=WP_060073161.1;Ontology_term=GO:0006260,GO:0006281,GO:0003676,GO:0003887,GO:0008408;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895981.1;locus_tag=LDO49_RS22575;product=error-prone DNA polymerase;protein_id=WP_060073161.1;transl_table=11 NZ_CAJZAV010000242.1 RefSeq gene 4066 4800 . + . ID=gene-LDO49_RS22580;Name=LDO49_RS22580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22580;old_locus_tag=BCEP4_360003 NZ_CAJZAV010000242.1 Protein Homology CDS 4066 4800 . + 0 ID=cds-WP_048025682.1;Parent=gene-LDO49_RS22580;Dbxref=GenBank:WP_048025682.1;Name=WP_048025682.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334292.1;locus_tag=LDO49_RS22580;product=GntR family transcriptional regulator;protein_id=WP_048025682.1;transl_table=11 NZ_CAJZAV010000242.1 RefSeq gene 4900 6003 . + . ID=gene-LDO49_RS22585;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=LDO49_RS22585;old_locus_tag=BCEP4_360004 NZ_CAJZAV010000242.1 Protein Homology CDS 4900 6003 . + 0 ID=cds-WP_048025681.1;Parent=gene-LDO49_RS22585;Dbxref=GenBank:WP_048025681.1;Name=WP_048025681.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008921875.1;locus_tag=LDO49_RS22585;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_048025681.1;transl_table=11 NZ_CAJZAV010000242.1 RefSeq gene 5996 7003 . + . ID=gene-LDO49_RS22590;Name=LDO49_RS22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22590;old_locus_tag=BCEP4_360005 NZ_CAJZAV010000242.1 Protein Homology CDS 5996 7003 . + 0 ID=cds-WP_048025680.1;Parent=gene-LDO49_RS22590;Dbxref=GenBank:WP_048025680.1;Name=WP_048025680.1;Ontology_term=GO:0005975,GO:0016787,GO:0097367;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024455.1;locus_tag=LDO49_RS22590;product=SIS domain-containing protein;protein_id=WP_048025680.1;transl_table=11 NZ_CAJZAV010000242.1 RefSeq gene 7019 9601 . + . ID=gene-LDO49_RS22595;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=LDO49_RS22595;old_locus_tag=BCEP4_360006 NZ_CAJZAV010000242.1 Protein Homology CDS 7019 9601 . + 0 ID=cds-WP_060073163.1;Parent=gene-LDO49_RS22595;Dbxref=GenBank:WP_060073163.1;Name=WP_060073163.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546260.1;locus_tag=LDO49_RS22595;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_060073163.1;transl_table=11 NZ_CAJZAV010000242.1 RefSeq gene 9699 10839 . + . ID=gene-LDO49_RS22600;Name=LDO49_RS22600;end_range=10839,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22600;partial=true NZ_CAJZAV010000242.1 Protein Homology CDS 9699 10839 . + 0 ID=cds-WP_224052367.1;Parent=gene-LDO49_RS22600;Dbxref=GenBank:WP_224052367.1;Name=WP_224052367.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;end_range=10839,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212677.1;locus_tag=LDO49_RS22600;partial=true;product=PTS transporter subunit EIIC;protein_id=WP_224052367.1;transl_table=11 ##sequence-region NZ_CAJZAV010000243.1 1 34148 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000243.1 RefSeq region 1 34148 . + . ID=NZ_CAJZAV010000243.1:1..34148;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_37 NZ_CAJZAV010000243.1 RefSeq gene 1 218 . - . ID=gene-LDO49_RS38320;Name=LDO49_RS38320;end_range=218,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38320;partial=true;start_range=.,1 NZ_CAJZAV010000243.1 Protein Homology CDS 1 218 . - 1 ID=cds-WP_443798007.1;Parent=gene-LDO49_RS38320;Dbxref=GenBank:WP_443798007.1;Name=WP_443798007.1;Ontology_term=GO:0003824,GO:0030976;end_range=218,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600702.1;locus_tag=LDO49_RS38320;partial=true;product=thiamine pyrophosphate-dependent enzyme;protein_id=WP_443798007.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 229 1525 . - . ID=gene-LDO49_RS22605;Name=LDO49_RS22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22605;old_locus_tag=BCEP4_370002;partial=true;start_range=.,229 NZ_CAJZAV010000243.1 Protein Homology CDS 229 1525 . - 0 ID=cds-WP_443798008.1;Parent=gene-LDO49_RS22605;Dbxref=GenBank:WP_443798008.1;Name=WP_443798008.1;Ontology_term=GO:0030976;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600702.1;locus_tag=LDO49_RS22605;partial=true;product=thiamine pyrophosphate-binding protein;protein_id=WP_443798008.1;start_range=.,229;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 1939 2175 . + . ID=gene-LDO49_RS22610;Name=vapB;gbkey=Gene;gene=vapB;gene_biotype=protein_coding;locus_tag=LDO49_RS22610;old_locus_tag=BCEP4_370003 NZ_CAJZAV010000243.1 Protein Homology CDS 1939 2175 . + 0 ID=cds-WP_059709565.1;Parent=gene-LDO49_RS22610;Dbxref=GenBank:WP_059709565.1;Name=WP_059709565.1;gbkey=CDS;gene=vapB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759705.1;locus_tag=LDO49_RS22610;product=type II toxin-antitoxin system VapB family antitoxin;protein_id=WP_059709565.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 2175 2576 . + . ID=gene-LDO49_RS22615;Name=LDO49_RS22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22615;old_locus_tag=BCEP4_370004 NZ_CAJZAV010000243.1 Protein Homology CDS 2175 2576 . + 0 ID=cds-WP_060229238.1;Parent=gene-LDO49_RS22615;Dbxref=GenBank:WP_060229238.1;Name=WP_060229238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754107.1;locus_tag=LDO49_RS22615;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_060229238.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 2644 4032 . - . ID=gene-LDO49_RS22620;Name=LDO49_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22620;old_locus_tag=BCEP4_370005 NZ_CAJZAV010000243.1 Protein Homology CDS 2644 4032 . - 0 ID=cds-WP_021164187.1;Parent=gene-LDO49_RS22620;Dbxref=GenBank:WP_021164187.1;Name=WP_021164187.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015004074.1;locus_tag=LDO49_RS22620;product=L-serine ammonia-lyase;protein_id=WP_021164187.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 4063 5199 . - . ID=gene-LDO49_RS22625;Name=LDO49_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22625;old_locus_tag=BCEP4_370006 NZ_CAJZAV010000243.1 Protein Homology CDS 4063 5199 . - 0 ID=cds-WP_059490381.1;Parent=gene-LDO49_RS22625;Dbxref=GenBank:WP_059490381.1;Name=WP_059490381.1;Ontology_term=GO:0016829,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004545290.1;locus_tag=LDO49_RS22625;product=alginate lyase family protein;protein_id=WP_059490381.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 5351 8278 . - . ID=gene-LDO49_RS22630;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=LDO49_RS22630;old_locus_tag=BCEP4_370007 NZ_CAJZAV010000243.1 Protein Homology CDS 5351 8278 . - 0 ID=cds-WP_224052368.1;Parent=gene-LDO49_RS22630;Dbxref=GenBank:WP_224052368.1;Name=WP_224052368.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754104.1;locus_tag=LDO49_RS22630;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_224052368.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 8342 8722 . - . ID=gene-LDO49_RS22635;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=LDO49_RS22635;old_locus_tag=BCEP4_370008 NZ_CAJZAV010000243.1 Protein Homology CDS 8342 8722 . - 0 ID=cds-WP_021164191.1;Parent=gene-LDO49_RS22635;Dbxref=GenBank:WP_021164191.1;Name=WP_021164191.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759700.1;locus_tag=LDO49_RS22635;product=glycine cleavage system protein GcvH;protein_id=WP_021164191.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 8841 9959 . - . ID=gene-LDO49_RS22640;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=LDO49_RS22640;old_locus_tag=BCEP4_370009 NZ_CAJZAV010000243.1 Protein Homology CDS 8841 9959 . - 0 ID=cds-WP_048025217.1;Parent=gene-LDO49_RS22640;Dbxref=GenBank:WP_048025217.1;Name=WP_048025217.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010093063.1;locus_tag=LDO49_RS22640;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_048025217.1;transl_table=11 NZ_CAJZAV010000243.1 cmsearch riboswitch 10044 10177 . - . ID=id-NZ_CAJZAV010000243.1:10044..10177;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAV010000243.1 cmsearch riboswitch 10212 10312 . - . ID=id-NZ_CAJZAV010000243.1:10212..10312;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAV010000243.1 RefSeq gene 10436 10798 . - . ID=gene-LDO49_RS22645;Name=LDO49_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22645;old_locus_tag=BCEP4_370011 NZ_CAJZAV010000243.1 Protein Homology CDS 10436 10798 . - 0 ID=cds-WP_021164193.1;Parent=gene-LDO49_RS22645;Dbxref=GenBank:WP_021164193.1;Name=WP_021164193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195883.1;locus_tag=LDO49_RS22645;product=hypothetical protein;protein_id=WP_021164193.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 10969 12021 . - . ID=gene-LDO49_RS22650;Name=LDO49_RS22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22650;old_locus_tag=BCEP4_370012 NZ_CAJZAV010000243.1 Protein Homology CDS 10969 12021 . - 0 ID=cds-WP_042978333.1;Parent=gene-LDO49_RS22650;Dbxref=GenBank:WP_042978333.1;Name=WP_042978333.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401418.1;locus_tag=LDO49_RS22650;product=oxidoreductase;protein_id=WP_042978333.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 12258 12965 . - . ID=gene-LDO49_RS22655;Name=LDO49_RS22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22655;old_locus_tag=BCEP4_370014 NZ_CAJZAV010000243.1 Protein Homology CDS 12258 12965 . - 0 ID=cds-WP_060073596.1;Parent=gene-LDO49_RS22655;Dbxref=GenBank:WP_060073596.1;Name=WP_060073596.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350566.1;locus_tag=LDO49_RS22655;product=SGNH/GDSL hydrolase family protein;protein_id=WP_060073596.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 13279 15366 . + . ID=gene-LDO49_RS22660;Name=LDO49_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22660;old_locus_tag=BCEP4_370015 NZ_CAJZAV010000243.1 Protein Homology CDS 13279 15366 . + 0 ID=cds-WP_048025221.1;Parent=gene-LDO49_RS22660;Dbxref=GenBank:WP_048025221.1;Name=WP_048025221.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751043.1;locus_tag=LDO49_RS22660;product=UvrD-helicase domain-containing protein;protein_id=WP_048025221.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 15491 16384 . - . ID=gene-LDO49_RS22665;Name=LDO49_RS22665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22665;old_locus_tag=BCEP4_370016 NZ_CAJZAV010000243.1 Protein Homology CDS 15491 16384 . - 0 ID=cds-WP_048025223.1;Parent=gene-LDO49_RS22665;Dbxref=GenBank:WP_048025223.1;Name=WP_048025223.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408293.1;locus_tag=LDO49_RS22665;product=c-type cytochrome;protein_id=WP_048025223.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 16637 16712 . + . ID=gene-LDO49_RS22670;Name=LDO49_RS22670;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS22670;old_locus_tag=BCEP4_TRNA11 NZ_CAJZAV010000243.1 tRNAscan-SE tRNA 16637 16712 . + . ID=rna-LDO49_RS22670;Parent=gene-LDO49_RS22670;anticodon=(pos:16670..16672);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS22670;product=tRNA-Arg NZ_CAJZAV010000243.1 tRNAscan-SE exon 16637 16712 . + . ID=exon-LDO49_RS22670-1;Parent=rna-LDO49_RS22670;anticodon=(pos:16670..16672);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS22670;product=tRNA-Arg NZ_CAJZAV010000243.1 RefSeq gene 16949 17278 . + . ID=gene-LDO49_RS22675;Name=LDO49_RS22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22675;old_locus_tag=BCEP4_370017 NZ_CAJZAV010000243.1 Protein Homology CDS 16949 17278 . + 0 ID=cds-WP_060073598.1;Parent=gene-LDO49_RS22675;Dbxref=GenBank:WP_060073598.1;Name=WP_060073598.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF013540.6;locus_tag=LDO49_RS22675;product=helix-turn-helix domain-containing protein;protein_id=WP_060073598.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 17353 19008 . + . ID=gene-LDO49_RS22680;Name=LDO49_RS22680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22680;old_locus_tag=BCEP4_370018 NZ_CAJZAV010000243.1 Protein Homology CDS 17353 19008 . + 0 ID=cds-WP_060073600.1;Parent=gene-LDO49_RS22680;Dbxref=GenBank:WP_060073600.1;Name=WP_060073600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362805.1;locus_tag=LDO49_RS22680;product=TIGR04222 domain-containing membrane protein;protein_id=WP_060073600.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 19430 20173 . + . ID=gene-LDO49_RS22685;Name=LDO49_RS22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22685;old_locus_tag=BCEP4_370019 NZ_CAJZAV010000243.1 Protein Homology CDS 19430 20173 . + 0 ID=cds-WP_060073602.1;Parent=gene-LDO49_RS22685;Dbxref=GenBank:WP_060073602.1;Name=WP_060073602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255924.1;locus_tag=LDO49_RS22685;product=acetyltransferase;protein_id=WP_060073602.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 20213 22153 . + . ID=gene-LDO49_RS22690;Name=LDO49_RS22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22690;old_locus_tag=BCEP4_370020 NZ_CAJZAV010000243.1 Protein Homology CDS 20213 22153 . + 0 ID=cds-WP_060073604.1;Parent=gene-LDO49_RS22690;Dbxref=GenBank:WP_060073604.1;Name=WP_060073604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327692.1;locus_tag=LDO49_RS22690;product=tetratricopeptide repeat protein;protein_id=WP_060073604.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 22246 22908 . + . ID=gene-LDO49_RS22695;Name=LDO49_RS22695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22695;old_locus_tag=BCEP4_370021 NZ_CAJZAV010000243.1 Protein Homology CDS 22246 22908 . + 0 ID=cds-WP_048025298.1;Parent=gene-LDO49_RS22695;Dbxref=GenBank:WP_048025298.1;Name=WP_048025298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411261.1;locus_tag=LDO49_RS22695;product=acetyltransferase;protein_id=WP_048025298.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 22919 24061 . - . ID=gene-LDO49_RS22700;Name=vioA;gbkey=Gene;gene=vioA;gene_biotype=protein_coding;locus_tag=LDO49_RS22700;old_locus_tag=BCEP4_370022 NZ_CAJZAV010000243.1 Protein Homology CDS 22919 24061 . - 0 ID=cds-WP_059490261.1;Parent=gene-LDO49_RS22700;Dbxref=GenBank:WP_059490261.1;Name=WP_059490261.1;gbkey=CDS;gene=vioA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484098.1;locus_tag=LDO49_RS22700;product=dTDP-4-amino-4%2C6-dideoxy-D-glucose aminotransferase VioA;protein_id=WP_059490261.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 24090 26429 . - . ID=gene-LDO49_RS22705;Name=LDO49_RS22705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22705;old_locus_tag=BCEP4_370023 NZ_CAJZAV010000243.1 Protein Homology CDS 24090 26429 . - 0 ID=cds-WP_059587961.1;Parent=gene-LDO49_RS22705;Dbxref=GenBank:WP_059587961.1;Name=WP_059587961.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484115.1;locus_tag=LDO49_RS22705;product=tetratricopeptide repeat protein;protein_id=WP_059587961.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 26675 26974 . - . ID=gene-LDO49_RS22710;Name=LDO49_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22710;old_locus_tag=BCEP4_370024 NZ_CAJZAV010000243.1 Protein Homology CDS 26675 26974 . - 0 ID=cds-WP_059493917.1;Parent=gene-LDO49_RS22710;Dbxref=GenBank:WP_059493917.1;Name=WP_059493917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546723.1;locus_tag=LDO49_RS22710;product=flagellar protein FliT;protein_id=WP_059493917.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 27000 28508 . - . ID=gene-LDO49_RS22715;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=LDO49_RS22715;old_locus_tag=BCEP4_370025 NZ_CAJZAV010000243.1 Protein Homology CDS 27000 28508 . - 0 ID=cds-WP_059490257.1;Parent=gene-LDO49_RS22715;Dbxref=GenBank:WP_059490257.1;Name=WP_059490257.1;Ontology_term=GO:0007155,GO:0009288;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546722.1;locus_tag=LDO49_RS22715;product=flagellar filament capping protein FliD;protein_id=WP_059490257.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 28641 29795 . - . ID=gene-LDO49_RS22720;Name=LDO49_RS22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22720;old_locus_tag=BCEP4_370026 NZ_CAJZAV010000243.1 Protein Homology CDS 28641 29795 . - 0 ID=cds-WP_021161125.1;Parent=gene-LDO49_RS22720;Dbxref=GenBank:WP_021161125.1;Name=WP_021161125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198207.1;locus_tag=LDO49_RS22720;product=flagellin;protein_id=WP_021161125.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 30316 30528 . + . ID=gene-LDO49_RS22725;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LDO49_RS22725;old_locus_tag=BCEP4_370027 NZ_CAJZAV010000243.1 Protein Homology CDS 30316 30528 . + 0 ID=cds-WP_006401410.1;Parent=gene-LDO49_RS22725;Dbxref=GenBank:WP_006401410.1;Name=WP_006401410.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198205.1;locus_tag=LDO49_RS22725;product=30S ribosomal protein S21;protein_id=WP_006401410.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 30680 32803 . - . ID=gene-LDO49_RS22730;Name=LDO49_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22730;old_locus_tag=BCEP4_370028 NZ_CAJZAV010000243.1 Protein Homology CDS 30680 32803 . - 0 ID=cds-WP_060073606.1;Parent=gene-LDO49_RS22730;Dbxref=GenBank:WP_060073606.1;Name=WP_060073606.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694089.1;locus_tag=LDO49_RS22730;product=TonB-dependent siderophore receptor;protein_id=WP_060073606.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq gene 33031 33914 . + . ID=gene-LDO49_RS22735;Name=LDO49_RS22735;end_range=33914,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22735;old_locus_tag=BCEP4_370029;partial=true NZ_CAJZAV010000243.1 Protein Homology CDS 33031 33914 . + 0 ID=cds-WP_443798009.1;Parent=gene-LDO49_RS22735;Dbxref=GenBank:WP_443798009.1;Name=WP_443798009.1;Ontology_term=GO:0016020;end_range=33914,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350583.1;locus_tag=LDO49_RS22735;partial=true;product=PepSY-associated TM helix domain-containing protein;protein_id=WP_443798009.1;transl_table=11 NZ_CAJZAV010000243.1 RefSeq pseudogene 33925 34148 . + . ID=gene-LDO49_RS38325;Name=LDO49_RS38325;end_range=34148,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38325;partial=true;pseudo=true;start_range=.,33925 NZ_CAJZAV010000243.1 Protein Homology CDS 33925 34148 . + 0 ID=cds-LDO49_RS38325;Parent=gene-LDO49_RS38325;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=34148,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350583.1;locus_tag=LDO49_RS38325;partial=true;product=PepSY domain-containing protein;pseudo=true;start_range=.,33925;transl_table=11 ##sequence-region NZ_CAJZAV010000244.1 1 744 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000244.1 RefSeq region 1 744 . + . ID=NZ_CAJZAV010000244.1:1..744;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_38 NZ_CAJZAV010000244.1 RefSeq gene 1 744 . - . ID=gene-LDO49_RS22740;Name=LDO49_RS22740;end_range=744,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22740;partial=true;start_range=.,1 NZ_CAJZAV010000244.1 Protein Homology CDS 1 744 . - 0 ID=cds-WP_224052370.1;Parent=gene-LDO49_RS22740;Dbxref=GenBank:WP_224052370.1;Name=WP_224052370.1;end_range=744,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604033.1;locus_tag=LDO49_RS22740;partial=true;product=3-hydroxybutyrate dehydrogenase;protein_id=WP_224052370.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAV010000245.1 1 132853 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000245.1 RefSeq region 1 132853 . + . ID=NZ_CAJZAV010000245.1:1..132853;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_39 NZ_CAJZAV010000245.1 RefSeq gene 1 554 . + . ID=gene-LDO49_RS22745;Name=LDO49_RS22745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22745;old_locus_tag=BCEP4_390001;partial=true;start_range=.,1 NZ_CAJZAV010000245.1 Protein Homology CDS 1 554 . + 2 ID=cds-WP_224052371.1;Parent=gene-LDO49_RS22745;Dbxref=GenBank:WP_224052371.1;Name=WP_224052371.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF019128.6;locus_tag=LDO49_RS22745;partial=true;product=cell wall hydrolase;protein_id=WP_224052371.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 526 1110 . + . ID=gene-LDO49_RS22750;Name=LDO49_RS22750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22750;old_locus_tag=BCEP4_390002 NZ_CAJZAV010000245.1 GeneMarkS-2+ CDS 526 1110 . + 0 ID=cds-WP_124474778.1;Parent=gene-LDO49_RS22750;Dbxref=GenBank:WP_124474778.1;Name=WP_124474778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS22750;product=hypothetical protein;protein_id=WP_124474778.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 1663 2499 . + . ID=gene-LDO49_RS22755;Name=LDO49_RS22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22755;old_locus_tag=BCEP4_390006 NZ_CAJZAV010000245.1 GeneMarkS-2+ CDS 1663 2499 . + 0 ID=cds-WP_060072724.1;Parent=gene-LDO49_RS22755;Dbxref=GenBank:WP_060072724.1;Name=WP_060072724.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS22755;product=hypothetical protein;protein_id=WP_060072724.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq pseudogene 2779 2883 . + . ID=gene-LDO49_RS22760;Name=LDO49_RS22760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS22760;old_locus_tag=BCEP4_390007;partial=true;pseudo=true;start_range=.,2779 NZ_CAJZAV010000245.1 Protein Homology CDS 2779 2883 . + 0 ID=cds-LDO49_RS22760;Parent=gene-LDO49_RS22760;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409777.1;locus_tag=LDO49_RS22760;partial=true;product=putative glycolipid-binding domain-containing protein;pseudo=true;start_range=.,2779;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 2838 3749 . - . ID=gene-LDO49_RS22765;Name=LDO49_RS22765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22765;old_locus_tag=BCEP4_390008 NZ_CAJZAV010000245.1 Protein Homology CDS 2838 3749 . - 0 ID=cds-WP_224052372.1;Parent=gene-LDO49_RS22765;Dbxref=GenBank:WP_224052372.1;Name=WP_224052372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403240.1;locus_tag=LDO49_RS22765;product=alpha/beta fold hydrolase;protein_id=WP_224052372.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 3754 4659 . - . ID=gene-LDO49_RS22770;Name=LDO49_RS22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22770;old_locus_tag=BCEP4_390009 NZ_CAJZAV010000245.1 Protein Homology CDS 3754 4659 . - 0 ID=cds-WP_021156859.1;Parent=gene-LDO49_RS22770;Dbxref=GenBank:WP_021156859.1;Name=WP_021156859.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329071.1;locus_tag=LDO49_RS22770;product=metal-dependent hydrolase;protein_id=WP_021156859.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 4656 5591 . - . ID=gene-LDO49_RS22775;Name=LDO49_RS22775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22775;old_locus_tag=BCEP4_390010 NZ_CAJZAV010000245.1 Protein Homology CDS 4656 5591 . - 0 ID=cds-WP_021156860.1;Parent=gene-LDO49_RS22775;Dbxref=GenBank:WP_021156860.1;Name=WP_021156860.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216831.1;locus_tag=LDO49_RS22775;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_021156860.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 5613 7196 . - . ID=gene-LDO49_RS22780;Name=LDO49_RS22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22780;old_locus_tag=BCEP4_390011 NZ_CAJZAV010000245.1 Protein Homology CDS 5613 7196 . - 0 ID=cds-WP_124469985.1;Parent=gene-LDO49_RS22780;Dbxref=GenBank:WP_124469985.1;Name=WP_124469985.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354752.1;locus_tag=LDO49_RS22780;product=flavin-containing monooxygenase;protein_id=WP_124469985.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq pseudogene 7443 8101 . - . ID=gene-LDO49_RS22785;Name=LDO49_RS22785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS22785;old_locus_tag=BCEP4_390014;pseudo=true NZ_CAJZAV010000245.1 Protein Homology CDS 7443 8101 . - 0 ID=cds-LDO49_RS22785;Parent=gene-LDO49_RS22785;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366283.1;locus_tag=LDO49_RS22785;product=lysoplasmalogenase;pseudo=true;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 8512 9480 . + . ID=gene-LDO49_RS22790;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=LDO49_RS22790;old_locus_tag=BCEP4_390015 NZ_CAJZAV010000245.1 Protein Homology CDS 8512 9480 . + 0 ID=cds-WP_059497012.1;Parent=gene-LDO49_RS22790;Dbxref=GenBank:WP_059497012.1;Name=WP_059497012.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759154.1;locus_tag=LDO49_RS22790;product=agmatinase;protein_id=WP_059497012.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 9736 11034 . - . ID=gene-LDO49_RS22795;Name=LDO49_RS22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22795;old_locus_tag=BCEP4_390016 NZ_CAJZAV010000245.1 Protein Homology CDS 9736 11034 . - 0 ID=cds-WP_224052402.1;Parent=gene-LDO49_RS22795;Dbxref=GenBank:WP_224052402.1;Name=WP_224052402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017455525.1;locus_tag=LDO49_RS22795;product=citrate synthase family protein;protein_id=WP_224052402.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 11138 12571 . + . ID=gene-LDO49_RS22800;Name=LDO49_RS22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22800;old_locus_tag=BCEP4_390017 NZ_CAJZAV010000245.1 Protein Homology CDS 11138 12571 . + 0 ID=cds-WP_060072716.1;Parent=gene-LDO49_RS22800;Dbxref=GenBank:WP_060072716.1;Name=WP_060072716.1;Ontology_term=GO:0003824,GO:0008410;gbkey=CDS;go_function=catalytic activity|0003824||IEA,CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354756.1;locus_tag=LDO49_RS22800;product=CoA transferase;protein_id=WP_060072716.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 12850 13830 . - . ID=gene-LDO49_RS22805;Name=LDO49_RS22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22805;old_locus_tag=BCEP4_390018 NZ_CAJZAV010000245.1 Protein Homology CDS 12850 13830 . - 0 ID=cds-WP_048022540.1;Parent=gene-LDO49_RS22805;Dbxref=GenBank:WP_048022540.1;Name=WP_048022540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853072.1;locus_tag=LDO49_RS22805;product=sulfonate ABC transporter substrate-binding protein;protein_id=WP_048022540.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 13954 14790 . - . ID=gene-LDO49_RS22810;Name=LDO49_RS22810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22810;old_locus_tag=BCEP4_390019 NZ_CAJZAV010000245.1 Protein Homology CDS 13954 14790 . - 0 ID=cds-WP_021156869.1;Parent=gene-LDO49_RS22810;Dbxref=GenBank:WP_021156869.1;Name=WP_021156869.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478759.1;locus_tag=LDO49_RS22810;product=MerR family transcriptional regulator;protein_id=WP_021156869.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 14878 15423 . - . ID=gene-LDO49_RS22815;Name=LDO49_RS22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22815;old_locus_tag=BCEP4_390020 NZ_CAJZAV010000245.1 Protein Homology CDS 14878 15423 . - 0 ID=cds-WP_021156870.1;Parent=gene-LDO49_RS22815;Dbxref=GenBank:WP_021156870.1;Name=WP_021156870.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478760.1;locus_tag=LDO49_RS22815;product=GNAT family N-acetyltransferase;protein_id=WP_021156870.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 15588 16607 . - . ID=gene-LDO49_RS22820;Name=LDO49_RS22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22820;old_locus_tag=BCEP4_390021 NZ_CAJZAV010000245.1 Protein Homology CDS 15588 16607 . - 0 ID=cds-WP_027789343.1;Parent=gene-LDO49_RS22820;Dbxref=GenBank:WP_027789343.1;Name=WP_027789343.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366276.1;locus_tag=LDO49_RS22820;product=AraC family transcriptional regulator;protein_id=WP_027789343.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 17032 18396 . + . ID=gene-LDO49_RS22825;Name=LDO49_RS22825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22825;old_locus_tag=BCEP4_390023 NZ_CAJZAV010000245.1 Protein Homology CDS 17032 18396 . + 0 ID=cds-WP_224052373.1;Parent=gene-LDO49_RS22825;Dbxref=GenBank:WP_224052373.1;Name=WP_224052373.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753090.1;locus_tag=LDO49_RS22825;product=MFS transporter;protein_id=WP_224052373.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 18516 19601 . + . ID=gene-LDO49_RS22830;Name=LDO49_RS22830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22830;old_locus_tag=BCEP4_390024 NZ_CAJZAV010000245.1 Protein Homology CDS 18516 19601 . + 0 ID=cds-WP_224052403.1;Parent=gene-LDO49_RS22830;Dbxref=GenBank:WP_224052403.1;Name=WP_224052403.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757860.1;locus_tag=LDO49_RS22830;product=porin;protein_id=WP_224052403.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 19615 20487 . - . ID=gene-LDO49_RS22835;Name=LDO49_RS22835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22835;old_locus_tag=BCEP4_390025 NZ_CAJZAV010000245.1 Protein Homology CDS 19615 20487 . - 0 ID=cds-WP_059854415.1;Parent=gene-LDO49_RS22835;Dbxref=GenBank:WP_059854415.1;Name=WP_059854415.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339795.1;locus_tag=LDO49_RS22835;product=LysR family transcriptional regulator;protein_id=WP_059854415.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 20619 21617 . + . ID=gene-LDO49_RS22840;Name=LDO49_RS22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22840;old_locus_tag=BCEP4_390026 NZ_CAJZAV010000245.1 Protein Homology CDS 20619 21617 . + 0 ID=cds-WP_059589139.1;Parent=gene-LDO49_RS22840;Dbxref=GenBank:WP_059589139.1;Name=WP_059589139.1;Ontology_term=GO:0003960,GO:0070402;gbkey=CDS;go_function=quinone reductase (NADPH) activity|0003960||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753092.1;locus_tag=LDO49_RS22840;product=quinone oxidoreductase family protein;protein_id=WP_059589139.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 21677 23191 . - . ID=gene-LDO49_RS22845;Name=LDO49_RS22845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22845;old_locus_tag=BCEP4_390027 NZ_CAJZAV010000245.1 Protein Homology CDS 21677 23191 . - 0 ID=cds-WP_059488178.1;Parent=gene-LDO49_RS22845;Dbxref=GenBank:WP_059488178.1;Name=WP_059488178.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496957.1;locus_tag=LDO49_RS22845;product=MDR family MFS transporter;protein_id=WP_059488178.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 23423 24982 . + . ID=gene-LDO49_RS22850;Name=LDO49_RS22850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22850;old_locus_tag=BCEP4_390028 NZ_CAJZAV010000245.1 Protein Homology CDS 23423 24982 . + 0 ID=cds-WP_059622627.1;Parent=gene-LDO49_RS22850;Dbxref=GenBank:WP_059622627.1;Name=WP_059622627.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882465.1;locus_tag=LDO49_RS22850;product=methyl-accepting chemotaxis protein;protein_id=WP_059622627.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 25039 26706 . - . ID=gene-LDO49_RS22855;Name=LDO49_RS22855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22855;old_locus_tag=BCEP4_390029 NZ_CAJZAV010000245.1 Protein Homology CDS 25039 26706 . - 0 ID=cds-WP_224052374.1;Parent=gene-LDO49_RS22855;Dbxref=GenBank:WP_224052374.1;Name=WP_224052374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354765.1;locus_tag=LDO49_RS22855;product=ATP-binding domain-containing protein;protein_id=WP_224052374.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 26833 27687 . - . ID=gene-LDO49_RS22860;Name=LDO49_RS22860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22860;old_locus_tag=BCEP4_390030 NZ_CAJZAV010000245.1 Protein Homology CDS 26833 27687 . - 0 ID=cds-WP_006485970.1;Parent=gene-LDO49_RS22860;Dbxref=GenBank:WP_006485970.1;Name=WP_006485970.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329083.1;locus_tag=LDO49_RS22860;product=helix-turn-helix domain-containing protein;protein_id=WP_006485970.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 27912 29246 . + . ID=gene-LDO49_RS22865;Name=LDO49_RS22865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22865;old_locus_tag=BCEP4_390031 NZ_CAJZAV010000245.1 Protein Homology CDS 27912 29246 . + 0 ID=cds-WP_021156879.1;Parent=gene-LDO49_RS22865;Dbxref=GenBank:WP_021156879.1;Name=WP_021156879.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009900352.1;locus_tag=LDO49_RS22865;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_021156879.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 29329 30423 . + . ID=gene-LDO49_RS22870;Name=LDO49_RS22870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22870;old_locus_tag=BCEP4_390032 NZ_CAJZAV010000245.1 Protein Homology CDS 29329 30423 . + 0 ID=cds-WP_021156880.1;Parent=gene-LDO49_RS22870;Dbxref=GenBank:WP_021156880.1;Name=WP_021156880.1;Ontology_term=GO:0030001,GO:0034220,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=metal ion transport|0030001||IEA,monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493390.1;locus_tag=LDO49_RS22870;product=potassium channel family protein;protein_id=WP_021156880.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 30602 31531 . - . ID=gene-LDO49_RS22875;Name=LDO49_RS22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22875;old_locus_tag=BCEP4_390033 NZ_CAJZAV010000245.1 Protein Homology CDS 30602 31531 . - 0 ID=cds-WP_021156881.1;Parent=gene-LDO49_RS22875;Dbxref=GenBank:WP_021156881.1;Name=WP_021156881.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013341718.1;locus_tag=LDO49_RS22875;product=LysR family transcriptional regulator;protein_id=WP_021156881.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 31842 33431 . + . ID=gene-LDO49_RS22880;Name=mdlC;gbkey=Gene;gene=mdlC;gene_biotype=protein_coding;locus_tag=LDO49_RS22880;old_locus_tag=BCEP4_390034 NZ_CAJZAV010000245.1 Protein Homology CDS 31842 33431 . + 0 ID=cds-WP_224052375.1;Parent=gene-LDO49_RS22880;Dbxref=GenBank:WP_224052375.1;Name=WP_224052375.1;Ontology_term=GO:0000287,GO:0030976;gbkey=CDS;gene=mdlC;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013341717.1;locus_tag=LDO49_RS22880;product=benzoylformate decarboxylase;protein_id=WP_224052375.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 33487 34938 . + . ID=gene-LDO49_RS22885;Name=LDO49_RS22885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22885;old_locus_tag=BCEP4_390035 NZ_CAJZAV010000245.1 Protein Homology CDS 33487 34938 . + 0 ID=cds-WP_224052404.1;Parent=gene-LDO49_RS22885;Dbxref=GenBank:WP_224052404.1;Name=WP_224052404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015015141.1;locus_tag=LDO49_RS22885;product=aldehyde dehydrogenase;protein_id=WP_224052404.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 35080 35205 . + . ID=gene-LDO49_RS37330;Name=LDO49_RS37330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37330 NZ_CAJZAV010000245.1 GeneMarkS-2+ CDS 35080 35205 . + 0 ID=cds-WP_290369876.1;Parent=gene-LDO49_RS37330;Dbxref=GenBank:WP_290369876.1;Name=WP_290369876.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37330;product=hypothetical protein;protein_id=WP_290369876.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 35202 36548 . + . ID=gene-LDO49_RS22890;Name=LDO49_RS22890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22890;old_locus_tag=BCEP4_390036 NZ_CAJZAV010000245.1 Protein Homology CDS 35202 36548 . + 0 ID=cds-WP_048022527.1;Parent=gene-LDO49_RS22890;Dbxref=GenBank:WP_048022527.1;Name=WP_048022527.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013341714.1;locus_tag=LDO49_RS22890;product=MFS transporter;protein_id=WP_048022527.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 36663 37835 . + . ID=gene-LDO49_RS22895;Name=LDO49_RS22895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22895;old_locus_tag=BCEP4_390037 NZ_CAJZAV010000245.1 Protein Homology CDS 36663 37835 . + 0 ID=cds-WP_124841802.1;Parent=gene-LDO49_RS22895;Dbxref=GenBank:WP_124841802.1;Name=WP_124841802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008353390.1;locus_tag=LDO49_RS22895;product=4-hydroxybenzoate 3-monooxygenase;protein_id=WP_124841802.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 37960 39120 . + . ID=gene-LDO49_RS22900;Name=LDO49_RS22900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22900;old_locus_tag=BCEP4_390038 NZ_CAJZAV010000245.1 Protein Homology CDS 37960 39120 . + 0 ID=cds-WP_224052376.1;Parent=gene-LDO49_RS22900;Dbxref=GenBank:WP_224052376.1;Name=WP_224052376.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013341713.1;locus_tag=LDO49_RS22900;product=alpha-hydroxy-acid oxidizing protein;protein_id=WP_224052376.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 39189 40148 . + . ID=gene-LDO49_RS22905;Name=LDO49_RS22905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22905;old_locus_tag=BCEP4_390039 NZ_CAJZAV010000245.1 Protein Homology CDS 39189 40148 . + 0 ID=cds-WP_196487237.1;Parent=gene-LDO49_RS22905;Dbxref=GenBank:WP_196487237.1;Name=WP_196487237.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF025878.6;locus_tag=LDO49_RS22905;product=helix-turn-helix domain-containing protein;protein_id=WP_196487237.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 40301 41353 . + . ID=gene-LDO49_RS22910;Name=LDO49_RS22910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22910;old_locus_tag=BCEP4_390040 NZ_CAJZAV010000245.1 Protein Homology CDS 40301 41353 . + 0 ID=cds-WP_224052377.1;Parent=gene-LDO49_RS22910;Dbxref=GenBank:WP_224052377.1;Name=WP_224052377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011828593.1;locus_tag=LDO49_RS22910;product=carbon-nitrogen hydrolase family protein;protein_id=WP_224052377.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 41487 42719 . + . ID=gene-LDO49_RS22915;Name=LDO49_RS22915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22915;old_locus_tag=BCEP4_390041 NZ_CAJZAV010000245.1 Protein Homology CDS 41487 42719 . + 0 ID=cds-WP_196486205.1;Parent=gene-LDO49_RS22915;Dbxref=GenBank:WP_196486205.1;Name=WP_196486205.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF024241.6;locus_tag=LDO49_RS22915;product=MFS transporter;protein_id=WP_196486205.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 42915 44336 . + . ID=gene-LDO49_RS22920;Name=iaaH;gbkey=Gene;gene=iaaH;gene_biotype=protein_coding;locus_tag=LDO49_RS22920;old_locus_tag=BCEP4_390042 NZ_CAJZAV010000245.1 Protein Homology CDS 42915 44336 . + 0 ID=cds-WP_224052378.1;Parent=gene-LDO49_RS22920;Dbxref=GenBank:WP_224052378.1;Name=WP_224052378.1;gbkey=CDS;gene=iaaH;inference=COORDINATES: protein motif:HMM:NF005688.0;locus_tag=LDO49_RS22920;product=indoleacetamide hydrolase;protein_id=WP_224052378.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 44373 45557 . + . ID=gene-LDO49_RS22925;Name=LDO49_RS22925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22925;old_locus_tag=BCEP4_390043 NZ_CAJZAV010000245.1 Protein Homology CDS 44373 45557 . + 0 ID=cds-WP_224052379.1;Parent=gene-LDO49_RS22925;Dbxref=GenBank:WP_224052379.1;Name=WP_224052379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019936222.1;locus_tag=LDO49_RS22925;product=substrate-binding domain-containing protein;protein_id=WP_224052379.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 45562 46407 . + . ID=gene-LDO49_RS22930;Name=LDO49_RS22930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22930;old_locus_tag=BCEP4_390044 NZ_CAJZAV010000245.1 Protein Homology CDS 45562 46407 . + 0 ID=cds-WP_224052380.1;Parent=gene-LDO49_RS22930;Dbxref=GenBank:WP_224052380.1;Name=WP_224052380.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020723392.1;locus_tag=LDO49_RS22930;product=branched-chain amino acid ABC transporter permease;protein_id=WP_224052380.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 46385 48160 . + . ID=gene-LDO49_RS22935;Name=LDO49_RS22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22935;old_locus_tag=BCEP4_390045 NZ_CAJZAV010000245.1 Protein Homology CDS 46385 48160 . + 0 ID=cds-WP_059589071.1;Parent=gene-LDO49_RS22935;Dbxref=GenBank:WP_059589071.1;Name=WP_059589071.1;Ontology_term=GO:0015803,GO:0005524,GO:0015658,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,branched-chain amino acid transmembrane transporter activity|0015658||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019936224.1;locus_tag=LDO49_RS22935;product=branched-chain amino acid ABC transporter ATP-binding protein/permease;protein_id=WP_059589071.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 48181 48864 . + . ID=gene-LDO49_RS22940;Name=LDO49_RS22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22940;old_locus_tag=BCEP4_390046 NZ_CAJZAV010000245.1 Protein Homology CDS 48181 48864 . + 0 ID=cds-WP_224052381.1;Parent=gene-LDO49_RS22940;Dbxref=GenBank:WP_224052381.1;Name=WP_224052381.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019936225.1;locus_tag=LDO49_RS22940;product=ABC transporter ATP-binding protein;protein_id=WP_224052381.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 48928 49665 . - . ID=gene-LDO49_RS22945;Name=LDO49_RS22945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22945;old_locus_tag=BCEP4_390047 NZ_CAJZAV010000245.1 Protein Homology CDS 48928 49665 . - 0 ID=cds-WP_224052382.1;Parent=gene-LDO49_RS22945;Dbxref=GenBank:WP_224052382.1;Name=WP_224052382.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349731.1;locus_tag=LDO49_RS22945;product=helix-turn-helix transcriptional regulator;protein_id=WP_224052382.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 50122 51180 . + . ID=gene-LDO49_RS22950;Name=LDO49_RS22950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22950;old_locus_tag=BCEP4_390049 NZ_CAJZAV010000245.1 Protein Homology CDS 50122 51180 . + 0 ID=cds-WP_021156897.1;Parent=gene-LDO49_RS22950;Dbxref=GenBank:WP_021156897.1;Name=WP_021156897.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725551.1;locus_tag=LDO49_RS22950;product=porin;protein_id=WP_021156897.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 51247 52638 . - . ID=gene-LDO49_RS22955;Name=LDO49_RS22955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22955;old_locus_tag=BCEP4_390050 NZ_CAJZAV010000245.1 Protein Homology CDS 51247 52638 . - 0 ID=cds-WP_042972983.1;Parent=gene-LDO49_RS22955;Dbxref=GenBank:WP_042972983.1;Name=WP_042972983.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405206.1;locus_tag=LDO49_RS22955;product=aminotransferase-like domain-containing protein;protein_id=WP_042972983.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 53020 53502 . + . ID=gene-LDO49_RS22960;Name=LDO49_RS22960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22960;old_locus_tag=BCEP4_390051 NZ_CAJZAV010000245.1 Protein Homology CDS 53020 53502 . + 0 ID=cds-WP_006405208.1;Parent=gene-LDO49_RS22960;Dbxref=GenBank:WP_006405208.1;Name=WP_006405208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008920862.1;locus_tag=LDO49_RS22960;product=MSMEG_0572/Sll0783 family nitrogen starvation response protein;protein_id=WP_006405208.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 53522 54544 . + . ID=gene-LDO49_RS22965;Name=LDO49_RS22965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22965;old_locus_tag=BCEP4_390052 NZ_CAJZAV010000245.1 Protein Homology CDS 53522 54544 . + 0 ID=cds-WP_224052383.1;Parent=gene-LDO49_RS22965;Dbxref=GenBank:WP_224052383.1;Name=WP_224052383.1;Ontology_term=GO:0009058,GO:0000257;gbkey=CDS;go_function=nitrilase activity|0000257||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880178.1;locus_tag=LDO49_RS22965;product=Nit6803 family nitrilase;protein_id=WP_224052383.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 54537 55607 . + . ID=gene-LDO49_RS22970;Name=LDO49_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22970;old_locus_tag=BCEP4_390053 NZ_CAJZAV010000245.1 Protein Homology CDS 54537 55607 . + 0 ID=cds-WP_059697794.1;Parent=gene-LDO49_RS22970;Dbxref=GenBank:WP_059697794.1;Name=WP_059697794.1;Ontology_term=GO:0009058,GO:0046500,GO:0051539;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=biosynthetic process|0009058||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405211.1;locus_tag=LDO49_RS22970;product=MSMEG_0568 family radical SAM protein;protein_id=WP_059697794.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 55610 56170 . + . ID=gene-LDO49_RS22975;Name=LDO49_RS22975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22975;old_locus_tag=BCEP4_390054 NZ_CAJZAV010000245.1 Protein Homology CDS 55610 56170 . + 0 ID=cds-WP_027789319.1;Parent=gene-LDO49_RS22975;Dbxref=GenBank:WP_027789319.1;Name=WP_027789319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880180.1;locus_tag=LDO49_RS22975;product=MSMEG_0567/Sll0786 family nitrogen starvation N-acetyltransferase;protein_id=WP_027789319.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 56167 57150 . + . ID=gene-LDO49_RS22980;Name=LDO49_RS22980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22980;old_locus_tag=BCEP4_390055 NZ_CAJZAV010000245.1 Protein Homology CDS 56167 57150 . + 0 ID=cds-WP_060072682.1;Parent=gene-LDO49_RS22980;Dbxref=GenBank:WP_060072682.1;Name=WP_060072682.1;Ontology_term=GO:0009058,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405213.1;locus_tag=LDO49_RS22980;product=sll0787 family AIR synthase-like protein;protein_id=WP_060072682.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 57147 58331 . + . ID=gene-LDO49_RS22985;Name=LDO49_RS22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22985;old_locus_tag=BCEP4_390056 NZ_CAJZAV010000245.1 Protein Homology CDS 57147 58331 . + 0 ID=cds-WP_060072680.1;Parent=gene-LDO49_RS22985;Dbxref=GenBank:WP_060072680.1;Name=WP_060072680.1;Ontology_term=GO:0009058,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405214.1;locus_tag=LDO49_RS22985;product=MSMEG_0565 family glycosyltransferase;protein_id=WP_060072680.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 58341 58625 . + . ID=gene-LDO49_RS22990;Name=LDO49_RS22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22990;old_locus_tag=BCEP4_390058 NZ_CAJZAV010000245.1 Protein Homology CDS 58341 58625 . + 0 ID=cds-WP_021156903.1;Parent=gene-LDO49_RS22990;Dbxref=GenBank:WP_021156903.1;Name=WP_021156903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405215.1;locus_tag=LDO49_RS22990;product=MSMEG_0570 family nitrogen starvation response protein;protein_id=WP_021156903.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 58682 59983 . + . ID=gene-LDO49_RS22995;Name=LDO49_RS22995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS22995;old_locus_tag=BCEP4_390057 NZ_CAJZAV010000245.1 Protein Homology CDS 58682 59983 . + 0 ID=cds-WP_060052278.1;Parent=gene-LDO49_RS22995;Dbxref=GenBank:WP_060052278.1;Name=WP_060052278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018432742.1;locus_tag=LDO49_RS22995;product=MSMEG_0569 family flavin-dependent oxidoreductase;protein_id=WP_060052278.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 59989 60822 . + . ID=gene-LDO49_RS23000;Name=LDO49_RS23000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23000;old_locus_tag=BCEP4_390059 NZ_CAJZAV010000245.1 Protein Homology CDS 59989 60822 . + 0 ID=cds-WP_060072675.1;Parent=gene-LDO49_RS23000;Dbxref=GenBank:WP_060072675.1;Name=WP_060072675.1;Ontology_term=GO:0009058;gbkey=CDS;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880185.1;locus_tag=LDO49_RS23000;product=Pnap_2097 family protein;protein_id=WP_060072675.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 60819 62960 . + . ID=gene-LDO49_RS23005;Name=scpA;gbkey=Gene;gene=scpA;gene_biotype=protein_coding;locus_tag=LDO49_RS23005;old_locus_tag=BCEP4_390060 NZ_CAJZAV010000245.1 Protein Homology CDS 60819 62960 . + 0 ID=cds-WP_060072673.1;Parent=gene-LDO49_RS23005;Dbxref=GenBank:WP_060072673.1;Name=WP_060072673.1;Ontology_term=GO:0004494,GO:0031419,GO:0046872;gbkey=CDS;gene=scpA;go_function=methylmalonyl-CoA mutase activity|0004494||IEA,cobalamin binding|0031419||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405218.1;locus_tag=LDO49_RS23005;product=methylmalonyl-CoA mutase;protein_id=WP_060072673.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 63071 63193 . - . ID=gene-LDO49_RS37335;Name=LDO49_RS37335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37335;old_locus_tag=BCEP4_390061 NZ_CAJZAV010000245.1 GeneMarkS-2+ CDS 63071 63193 . - 0 ID=cds-WP_258025661.1;Parent=gene-LDO49_RS37335;Dbxref=GenBank:WP_258025661.1;Name=WP_258025661.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37335;product=hypothetical protein;protein_id=WP_258025661.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 63527 64834 . + . ID=gene-LDO49_RS23010;Name=LDO49_RS23010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23010;old_locus_tag=BCEP4_390062 NZ_CAJZAV010000245.1 Protein Homology CDS 63527 64834 . + 0 ID=cds-WP_021156910.1;Parent=gene-LDO49_RS23010;Dbxref=GenBank:WP_021156910.1;Name=WP_021156910.1;Note=This protein belongs to a clade of FMN-dependent monooxygenases%2C within a broader family of flavin-dependent oxidoreductases%2C the luciferase-like monooxygenase (LMM) family%2C some of whose members use coenzyme F420 rather than FMN.;Ontology_term=GO:0008152,GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498237.1;locus_tag=LDO49_RS23010;product=NtaA/DmoA family FMN-dependent monooxygenase;protein_id=WP_021156910.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 65018 65821 . + . ID=gene-LDO49_RS23015;Name=LDO49_RS23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23015;old_locus_tag=BCEP4_390063 NZ_CAJZAV010000245.1 Protein Homology CDS 65018 65821 . + 0 ID=cds-WP_060072671.1;Parent=gene-LDO49_RS23015;Dbxref=GenBank:WP_060072671.1;Name=WP_060072671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603116.1;locus_tag=LDO49_RS23015;product=transporter substrate-binding domain-containing protein;protein_id=WP_060072671.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 65826 66560 . + . ID=gene-LDO49_RS23020;Name=LDO49_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23020;old_locus_tag=BCEP4_390064 NZ_CAJZAV010000245.1 Protein Homology CDS 65826 66560 . + 0 ID=cds-WP_224052385.1;Parent=gene-LDO49_RS23020;Dbxref=GenBank:WP_224052385.1;Name=WP_224052385.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092711.1;locus_tag=LDO49_RS23020;product=ABC transporter permease;protein_id=WP_224052385.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 66557 67327 . + . ID=gene-LDO49_RS23025;Name=LDO49_RS23025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23025;old_locus_tag=BCEP4_390065 NZ_CAJZAV010000245.1 Protein Homology CDS 66557 67327 . + 0 ID=cds-WP_021156913.1;Parent=gene-LDO49_RS23025;Dbxref=GenBank:WP_021156913.1;Name=WP_021156913.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725212.1;locus_tag=LDO49_RS23025;product=ABC transporter permease;protein_id=WP_021156913.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 67354 68733 . + . ID=gene-LDO49_RS23030;Name=LDO49_RS23030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23030;old_locus_tag=BCEP4_390066 NZ_CAJZAV010000245.1 Protein Homology CDS 67354 68733 . + 0 ID=cds-WP_059496931.1;Parent=gene-LDO49_RS23030;Dbxref=GenBank:WP_059496931.1;Name=WP_059496931.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604101.1;locus_tag=LDO49_RS23030;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_059496931.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq pseudogene 68851 69098 . - . ID=gene-LDO49_RS23035;Name=LDO49_RS23035;end_range=69098,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS23035;partial=true;pseudo=true;start_range=.,68851 NZ_CAJZAV010000245.1 Protein Homology CDS 68851 69098 . - 0 ID=cds-LDO49_RS23035;Parent=gene-LDO49_RS23035;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=69098,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009961940.1;locus_tag=LDO49_RS23035;partial=true;product=preprotein translocase;pseudo=true;start_range=.,68851;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 69137 70057 . - . ID=gene-LDO49_RS23040;Name=LDO49_RS23040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23040;old_locus_tag=BCEP4_390068 NZ_CAJZAV010000245.1 Protein Homology CDS 69137 70057 . - 0 ID=cds-WP_224052386.1;Parent=gene-LDO49_RS23040;Dbxref=GenBank:WP_224052386.1;Name=WP_224052386.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725634.1;locus_tag=LDO49_RS23040;product=LysR family transcriptional regulator;protein_id=WP_224052386.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 70559 71581 . + . ID=gene-LDO49_RS23045;Name=LDO49_RS23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23045;old_locus_tag=BCEP4_390070 NZ_CAJZAV010000245.1 GeneMarkS-2+ CDS 70559 71581 . + 0 ID=cds-WP_224052387.1;Parent=gene-LDO49_RS23045;Dbxref=GenBank:WP_224052387.1;Name=WP_224052387.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS23045;product=formylglycine-generating enzyme family protein;protein_id=WP_224052387.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 71972 72718 . - . ID=gene-LDO49_RS23050;Name=LDO49_RS23050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23050;old_locus_tag=BCEP4_390071 NZ_CAJZAV010000245.1 Protein Homology CDS 71972 72718 . - 0 ID=cds-WP_059488155.1;Parent=gene-LDO49_RS23050;Dbxref=GenBank:WP_059488155.1;Name=WP_059488155.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010118976.1;locus_tag=LDO49_RS23050;product=glucose 1-dehydrogenase;protein_id=WP_059488155.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 72878 73519 . - . ID=gene-LDO49_RS23055;Name=LDO49_RS23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23055;old_locus_tag=BCEP4_390072 NZ_CAJZAV010000245.1 Protein Homology CDS 72878 73519 . - 0 ID=cds-WP_021156918.1;Parent=gene-LDO49_RS23055;Dbxref=GenBank:WP_021156918.1;Name=WP_021156918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013544102.1;locus_tag=LDO49_RS23055;product=HD domain-containing protein;protein_id=WP_021156918.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 73586 75055 . - . ID=gene-LDO49_RS23060;Name=LDO49_RS23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23060;old_locus_tag=BCEP4_390073 NZ_CAJZAV010000245.1 Protein Homology CDS 73586 75055 . - 0 ID=cds-WP_224052405.1;Parent=gene-LDO49_RS23060;Dbxref=GenBank:WP_224052405.1;Name=WP_224052405.1;Ontology_term=GO:0004096,GO:0020037,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697249.1;locus_tag=LDO49_RS23060;product=catalase;protein_id=WP_224052405.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 75431 76363 . - . ID=gene-LDO49_RS23065;Name=LDO49_RS23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23065;old_locus_tag=BCEP4_390074 NZ_CAJZAV010000245.1 Protein Homology CDS 75431 76363 . - 0 ID=cds-WP_175849850.1;Parent=gene-LDO49_RS23065;Dbxref=GenBank:WP_175849850.1;Name=WP_175849850.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: protein motif:HMM:NF024242.6;locus_tag=LDO49_RS23065;product=helix-turn-helix domain-containing protein;protein_id=WP_175849850.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 76601 78067 . - . ID=gene-LDO49_RS23070;Name=LDO49_RS23070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23070;old_locus_tag=BCEP4_390075 NZ_CAJZAV010000245.1 Protein Homology CDS 76601 78067 . - 0 ID=cds-WP_224052388.1;Parent=gene-LDO49_RS23070;Dbxref=GenBank:WP_224052388.1;Name=WP_224052388.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777550.1;locus_tag=LDO49_RS23070;product=efflux transporter outer membrane subunit;protein_id=WP_224052388.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 78164 78781 . + . ID=gene-LDO49_RS23075;Name=LDO49_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23075;old_locus_tag=BCEP4_390076 NZ_CAJZAV010000245.1 Protein Homology CDS 78164 78781 . + 0 ID=cds-WP_224052389.1;Parent=gene-LDO49_RS23075;Dbxref=GenBank:WP_224052389.1;Name=WP_224052389.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545503.1;locus_tag=LDO49_RS23075;product=TetR/AcrR family transcriptional regulator;protein_id=WP_224052389.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 78858 79979 . + . ID=gene-LDO49_RS23080;Name=LDO49_RS23080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23080;old_locus_tag=BCEP4_390077 NZ_CAJZAV010000245.1 Protein Homology CDS 78858 79979 . + 0 ID=cds-WP_059553603.1;Parent=gene-LDO49_RS23080;Dbxref=GenBank:WP_059553603.1;Name=WP_059553603.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777552.1;locus_tag=LDO49_RS23080;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_059553603.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 79976 83074 . + . ID=gene-LDO49_RS23085;Name=LDO49_RS23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23085;old_locus_tag=BCEP4_390078 NZ_CAJZAV010000245.1 Protein Homology CDS 79976 83074 . + 0 ID=cds-WP_224052390.1;Parent=gene-LDO49_RS23085;Dbxref=GenBank:WP_224052390.1;Name=WP_224052390.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018423843.1;locus_tag=LDO49_RS23085;product=efflux RND transporter permease subunit;protein_id=WP_224052390.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq pseudogene 83271 83462 . - . ID=gene-LDO49_RS23090;Name=LDO49_RS23090;end_range=83462,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS23090;partial=true;pseudo=true NZ_CAJZAV010000245.1 Protein Homology CDS 83271 83462 . - 0 ID=cds-LDO49_RS23090;Parent=gene-LDO49_RS23090;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=83462,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611481.1;locus_tag=LDO49_RS23090;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 83580 85742 . - . ID=gene-LDO49_RS23095;Name=LDO49_RS23095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23095;old_locus_tag=BCEP4_390079 NZ_CAJZAV010000245.1 Protein Homology CDS 83580 85742 . - 0 ID=cds-WP_224052391.1;Parent=gene-LDO49_RS23095;Dbxref=GenBank:WP_224052391.1;Name=WP_224052391.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328261.1;locus_tag=LDO49_RS23095;product=TonB-dependent siderophore receptor;protein_id=WP_224052391.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 85935 87959 . - . ID=gene-LDO49_RS23100;Name=fhuB;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=LDO49_RS23100;old_locus_tag=BCEP4_390080 NZ_CAJZAV010000245.1 Protein Homology CDS 85935 87959 . - 0 ID=cds-WP_224052392.1;Parent=gene-LDO49_RS23100;Dbxref=GenBank:WP_224052392.1;Name=WP_224052392.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=fhuB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328262.1;locus_tag=LDO49_RS23100;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;protein_id=WP_224052392.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 87952 88926 . - . ID=gene-LDO49_RS23105;Name=LDO49_RS23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23105;old_locus_tag=BCEP4_390081 NZ_CAJZAV010000245.1 Protein Homology CDS 87952 88926 . - 0 ID=cds-WP_224052393.1;Parent=gene-LDO49_RS23105;Dbxref=GenBank:WP_224052393.1;Name=WP_224052393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476309.1;locus_tag=LDO49_RS23105;product=ABC transporter substrate-binding protein;protein_id=WP_224052393.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 88923 89753 . - . ID=gene-LDO49_RS23110;Name=LDO49_RS23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23110;old_locus_tag=BCEP4_390082 NZ_CAJZAV010000245.1 Protein Homology CDS 88923 89753 . - 0 ID=cds-WP_081057316.1;Parent=gene-LDO49_RS23110;Dbxref=GenBank:WP_081057316.1;Name=WP_081057316.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476308.1;locus_tag=LDO49_RS23110;product=ABC transporter ATP-binding protein;protein_id=WP_081057316.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 89750 91426 . - . ID=gene-LDO49_RS23115;Name=LDO49_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23115;old_locus_tag=BCEP4_390083 NZ_CAJZAV010000245.1 Protein Homology CDS 89750 91426 . - 0 ID=cds-WP_224052394.1;Parent=gene-LDO49_RS23115;Dbxref=GenBank:WP_224052394.1;Name=WP_224052394.1;Ontology_term=GO:0015833,GO:0005524,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328263.1;locus_tag=LDO49_RS23115;product=cyclic peptide export ABC transporter;protein_id=WP_224052394.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 91646 92431 . + . ID=gene-LDO49_RS23120;Name=LDO49_RS23120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23120;old_locus_tag=BCEP4_390084 NZ_CAJZAV010000245.1 Protein Homology CDS 91646 92431 . + 0 ID=cds-WP_224052395.1;Parent=gene-LDO49_RS23120;Dbxref=GenBank:WP_224052395.1;Name=WP_224052395.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328264.1;locus_tag=LDO49_RS23120;product=AraC family transcriptional regulator;protein_id=WP_224052395.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 92512 93270 . - . ID=gene-LDO49_RS23125;Name=LDO49_RS23125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23125;old_locus_tag=BCEP4_390085 NZ_CAJZAV010000245.1 Protein Homology CDS 92512 93270 . - 0 ID=cds-WP_224052406.1;Parent=gene-LDO49_RS23125;Dbxref=GenBank:WP_224052406.1;Name=WP_224052406.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216840.1;locus_tag=LDO49_RS23125;product=SDR family oxidoreductase;protein_id=WP_224052406.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq pseudogene 93215 93868 . - . ID=gene-LDO49_RS23130;Name=LDO49_RS23130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS23130;partial=true;pseudo=true;start_range=.,93215 NZ_CAJZAV010000245.1 Protein Homology CDS 93215 93868 . - 0 ID=cds-LDO49_RS23130;Parent=gene-LDO49_RS23130;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005992,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397003.1;locus_tag=LDO49_RS23130;partial=true;product=trehalose-6-phosphate synthase;pseudo=true;start_range=.,93215;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 94467 96086 . - . ID=gene-LDO49_RS23135;Name=LDO49_RS23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23135;old_locus_tag=BCEP4_390086 NZ_CAJZAV010000245.1 Protein Homology CDS 94467 96086 . - 0 ID=cds-WP_021162137.1;Parent=gene-LDO49_RS23135;Dbxref=GenBank:WP_021162137.1;Name=WP_021162137.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494823.1;locus_tag=LDO49_RS23135;product=methyl-accepting chemotaxis protein;protein_id=WP_021162137.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 96555 98633 . - . ID=gene-LDO49_RS23140;Name=LDO49_RS23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23140;old_locus_tag=BCEP4_390088 NZ_CAJZAV010000245.1 Protein Homology CDS 96555 98633 . - 0 ID=cds-WP_224052396.1;Parent=gene-LDO49_RS23140;Dbxref=GenBank:WP_224052396.1;Name=WP_224052396.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339934.1;locus_tag=LDO49_RS23140;product=TonB-dependent receptor;protein_id=WP_224052396.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 99055 100083 . + . ID=gene-LDO49_RS23145;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=LDO49_RS23145;old_locus_tag=BCEP4_390089 NZ_CAJZAV010000245.1 Protein Homology CDS 99055 100083 . + 0 ID=cds-WP_021162135.1;Parent=gene-LDO49_RS23145;Dbxref=GenBank:WP_021162135.1;Name=WP_021162135.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760344.1;locus_tag=LDO49_RS23145;product=alcohol dehydrogenase AdhP;protein_id=WP_021162135.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 100148 101626 . - . ID=gene-LDO49_RS23150;Name=LDO49_RS23150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23150;old_locus_tag=BCEP4_390090 NZ_CAJZAV010000245.1 Protein Homology CDS 100148 101626 . - 0 ID=cds-WP_060071904.1;Parent=gene-LDO49_RS23150;Dbxref=GenBank:WP_060071904.1;Name=WP_060071904.1;Ontology_term=GO:0005975,GO:0004308;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397007.1;locus_tag=LDO49_RS23150;product=sialidase family protein;protein_id=WP_060071904.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 102113 102544 . - . ID=gene-LDO49_RS23155;Name=LDO49_RS23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23155;old_locus_tag=BCEP4_390091 NZ_CAJZAV010000245.1 Protein Homology CDS 102113 102544 . - 0 ID=cds-WP_021162132.1;Parent=gene-LDO49_RS23155;Dbxref=GenBank:WP_021162132.1;Name=WP_021162132.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882272.1;locus_tag=LDO49_RS23155;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_021162132.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 102541 103458 . - . ID=gene-LDO49_RS23160;Name=LDO49_RS23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23160;old_locus_tag=BCEP4_390092 NZ_CAJZAV010000245.1 Protein Homology CDS 102541 103458 . - 0 ID=cds-WP_060071903.1;Parent=gene-LDO49_RS23160;Dbxref=GenBank:WP_060071903.1;Name=WP_060071903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355130.1;locus_tag=LDO49_RS23160;product=alpha/beta hydrolase family protein;protein_id=WP_060071903.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 103760 104725 . + . ID=gene-LDO49_RS23165;Name=LDO49_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23165;old_locus_tag=BCEP4_390093 NZ_CAJZAV010000245.1 Protein Homology CDS 103760 104725 . + 0 ID=cds-WP_175849970.1;Parent=gene-LDO49_RS23165;Dbxref=GenBank:WP_175849970.1;Name=WP_175849970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355131.1;locus_tag=LDO49_RS23165;product=ABC transporter substrate-binding protein;protein_id=WP_175849970.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 104778 105872 . + . ID=gene-LDO49_RS23170;Name=LDO49_RS23170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23170;old_locus_tag=BCEP4_390094 NZ_CAJZAV010000245.1 Protein Homology CDS 104778 105872 . + 0 ID=cds-WP_224052397.1;Parent=gene-LDO49_RS23170;Dbxref=GenBank:WP_224052397.1;Name=WP_224052397.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339940.1;locus_tag=LDO49_RS23170;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_224052397.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 105978 106910 . - . ID=gene-LDO49_RS23175;Name=LDO49_RS23175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23175;old_locus_tag=BCEP4_390095 NZ_CAJZAV010000245.1 Protein Homology CDS 105978 106910 . - 0 ID=cds-WP_224052398.1;Parent=gene-LDO49_RS23175;Dbxref=GenBank:WP_224052398.1;Name=WP_224052398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494830.1;locus_tag=LDO49_RS23175;product=ABC transporter substrate-binding protein;protein_id=WP_224052398.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 106945 108732 . - . ID=gene-LDO49_RS23180;Name=LDO49_RS23180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23180;old_locus_tag=BCEP4_390096 NZ_CAJZAV010000245.1 Protein Homology CDS 106945 108732 . - 0 ID=cds-WP_224052399.1;Parent=gene-LDO49_RS23180;Dbxref=GenBank:WP_224052399.1;Name=WP_224052399.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339942.1;locus_tag=LDO49_RS23180;product=amino acid ABC transporter permease/ATP-binding protein;protein_id=WP_224052399.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 108803 110155 . - . ID=gene-LDO49_RS23185;Name=LDO49_RS23185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23185;old_locus_tag=BCEP4_390097 NZ_CAJZAV010000245.1 Protein Homology CDS 108803 110155 . - 0 ID=cds-WP_060071897.1;Parent=gene-LDO49_RS23185;Dbxref=GenBank:WP_060071897.1;Name=WP_060071897.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355135.1;locus_tag=LDO49_RS23185;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_060071897.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 110163 111212 . - . ID=gene-LDO49_RS23190;Name=LDO49_RS23190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23190;old_locus_tag=BCEP4_390098 NZ_CAJZAV010000245.1 Protein Homology CDS 110163 111212 . - 0 ID=cds-WP_060071895.1;Parent=gene-LDO49_RS23190;Dbxref=GenBank:WP_060071895.1;Name=WP_060071895.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754408.1;locus_tag=LDO49_RS23190;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_060071895.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 111281 112228 . - . ID=gene-LDO49_RS23195;Name=LDO49_RS23195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23195;old_locus_tag=BCEP4_390099 NZ_CAJZAV010000245.1 Protein Homology CDS 111281 112228 . - 0 ID=cds-WP_021158756.1;Parent=gene-LDO49_RS23195;Dbxref=GenBank:WP_021158756.1;Name=WP_021158756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899327.1;locus_tag=LDO49_RS23195;product=ABC transporter substrate-binding protein;protein_id=WP_021158756.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 112285 112845 . - . ID=gene-LDO49_RS23200;Name=LDO49_RS23200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23200;old_locus_tag=BCEP4_390100 NZ_CAJZAV010000245.1 Protein Homology CDS 112285 112845 . - 0 ID=cds-WP_060071892.1;Parent=gene-LDO49_RS23200;Dbxref=GenBank:WP_060071892.1;Name=WP_060071892.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413127.1;locus_tag=LDO49_RS23200;product=GNAT family N-acetyltransferase;protein_id=WP_060071892.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 113163 113564 . - . ID=gene-LDO49_RS23205;Name=LDO49_RS23205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23205;old_locus_tag=BCEP4_390101 NZ_CAJZAV010000245.1 Protein Homology CDS 113163 113564 . - 0 ID=cds-WP_042974280.1;Parent=gene-LDO49_RS23205;Dbxref=GenBank:WP_042974280.1;Name=WP_042974280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216965.1;locus_tag=LDO49_RS23205;product=type II toxin-antitoxin system MqsA family antitoxin;protein_id=WP_042974280.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 113567 113863 . - . ID=gene-LDO49_RS23210;Name=LDO49_RS23210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23210;old_locus_tag=BCEP4_390102 NZ_CAJZAV010000245.1 Protein Homology CDS 113567 113863 . - 0 ID=cds-WP_021158759.1;Parent=gene-LDO49_RS23210;Dbxref=GenBank:WP_021158759.1;Name=WP_021158759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413131.1;locus_tag=LDO49_RS23210;product=type II toxin-antitoxin system MqsR family toxin;protein_id=WP_021158759.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 113967 115007 . - . ID=gene-LDO49_RS23215;Name=LDO49_RS23215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23215;old_locus_tag=BCEP4_390103 NZ_CAJZAV010000245.1 Protein Homology CDS 113967 115007 . - 0 ID=cds-WP_059484890.1;Parent=gene-LDO49_RS23215;Dbxref=GenBank:WP_059484890.1;Name=WP_059484890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355141.1;locus_tag=LDO49_RS23215;product=succinylglutamate desuccinylase/aspartoacylase family protein;protein_id=WP_059484890.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 115250 115525 . - . ID=gene-LDO49_RS23220;Name=LDO49_RS23220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23220;old_locus_tag=BCEP4_390104 NZ_CAJZAV010000245.1 Protein Homology CDS 115250 115525 . - 0 ID=cds-WP_060071890.1;Parent=gene-LDO49_RS23220;Dbxref=GenBank:WP_060071890.1;Name=WP_060071890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413125.1;locus_tag=LDO49_RS23220;product=hypothetical protein;protein_id=WP_060071890.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 115769 117319 . - . ID=gene-LDO49_RS23225;Name=LDO49_RS23225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23225;old_locus_tag=BCEP4_390105 NZ_CAJZAV010000245.1 Protein Homology CDS 115769 117319 . - 0 ID=cds-WP_059484891.1;Parent=gene-LDO49_RS23225;Dbxref=GenBank:WP_059484891.1;Name=WP_059484891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658860.1;locus_tag=LDO49_RS23225;product=sensor domain-containing diguanylate cyclase;protein_id=WP_059484891.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 117318 117692 . + . ID=gene-LDO49_RS23230;Name=LDO49_RS23230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23230 NZ_CAJZAV010000245.1 GeneMarkS-2+ CDS 117318 117692 . + 0 ID=cds-WP_059866546.1;Parent=gene-LDO49_RS23230;Dbxref=GenBank:WP_059866546.1;Name=WP_059866546.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS23230;product=hypothetical protein;protein_id=WP_059866546.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 117833 120709 . + . ID=gene-LDO49_RS23235;Name=LDO49_RS23235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23235;old_locus_tag=BCEP4_390107 NZ_CAJZAV010000245.1 Protein Homology CDS 117833 120709 . + 0 ID=cds-WP_060071888.1;Parent=gene-LDO49_RS23235;Dbxref=GenBank:WP_060071888.1;Name=WP_060071888.1;Ontology_term=GO:0043546;gbkey=CDS;go_function=molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694739.1;locus_tag=LDO49_RS23235;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=WP_060071888.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 120706 121395 . + . ID=gene-LDO49_RS23240;Name=LDO49_RS23240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23240;old_locus_tag=BCEP4_390108 NZ_CAJZAV010000245.1 Protein Homology CDS 120706 121395 . + 0 ID=cds-WP_060071886.1;Parent=gene-LDO49_RS23240;Dbxref=GenBank:WP_060071886.1;Name=WP_060071886.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216972.1;locus_tag=LDO49_RS23240;product=(2Fe-2S)-binding protein;protein_id=WP_060071886.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 121392 122651 . + . ID=gene-LDO49_RS23245;Name=LDO49_RS23245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23245;old_locus_tag=BCEP4_390109 NZ_CAJZAV010000245.1 Protein Homology CDS 121392 122651 . + 0 ID=cds-WP_060071884.1;Parent=gene-LDO49_RS23245;Dbxref=GenBank:WP_060071884.1;Name=WP_060071884.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339955.1;locus_tag=LDO49_RS23245;product=cytochrome c;protein_id=WP_060071884.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 122741 122905 . - . ID=gene-LDO49_RS23250;Name=LDO49_RS23250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23250;old_locus_tag=BCEP4_390110 NZ_CAJZAV010000245.1 Protein Homology CDS 122741 122905 . - 0 ID=cds-WP_165580347.1;Parent=gene-LDO49_RS23250;Dbxref=GenBank:WP_165580347.1;Name=WP_165580347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397026.1;locus_tag=LDO49_RS23250;product=hypothetical protein;protein_id=WP_165580347.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 123110 123574 . + . ID=gene-LDO49_RS23255;Name=LDO49_RS23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23255;old_locus_tag=BCEP4_390111 NZ_CAJZAV010000245.1 Protein Homology CDS 123110 123574 . + 0 ID=cds-WP_060071882.1;Parent=gene-LDO49_RS23255;Dbxref=GenBank:WP_060071882.1;Name=WP_060071882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355147.1;locus_tag=LDO49_RS23255;product=hypothetical protein;protein_id=WP_060071882.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 123725 124216 . - . ID=gene-LDO49_RS23260;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=LDO49_RS23260;old_locus_tag=BCEP4_390112 NZ_CAJZAV010000245.1 Protein Homology CDS 123725 124216 . - 0 ID=cds-WP_042974287.1;Parent=gene-LDO49_RS23260;Dbxref=GenBank:WP_042974287.1;Name=WP_042974287.1;Ontology_term=GO:0009279;gbkey=CDS;gene=pal;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547681.1;locus_tag=LDO49_RS23260;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_042974287.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 124601 125797 . - . ID=gene-LDO49_RS23265;Name=LDO49_RS23265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23265;old_locus_tag=BCEP4_390113 NZ_CAJZAV010000245.1 Protein Homology CDS 124601 125797 . - 0 ID=cds-WP_042974289.1;Parent=gene-LDO49_RS23265;Dbxref=GenBank:WP_042974289.1;Name=WP_042974289.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339956.1;locus_tag=LDO49_RS23265;product=porin;protein_id=WP_042974289.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 126077 126748 . - . ID=gene-LDO49_RS23270;Name=LDO49_RS23270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23270;old_locus_tag=BCEP4_390114 NZ_CAJZAV010000245.1 Protein Homology CDS 126077 126748 . - 0 ID=cds-WP_224052400.1;Parent=gene-LDO49_RS23270;Dbxref=GenBank:WP_224052400.1;Name=WP_224052400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658853.1;locus_tag=LDO49_RS23270;product=hypothetical protein;protein_id=WP_224052400.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 126842 127243 . - . ID=gene-LDO49_RS37590;Name=LDO49_RS37590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37590 NZ_CAJZAV010000245.1 Protein Homology CDS 126842 127243 . - 0 ID=cds-WP_372585861.1;Parent=gene-LDO49_RS37590;Dbxref=GenBank:WP_372585861.1;Name=WP_372585861.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.6;locus_tag=LDO49_RS37590;product=helix-turn-helix domain-containing protein;protein_id=WP_372585861.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 128169 129143 . + . ID=gene-LDO49_RS23280;Name=LDO49_RS23280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23280;old_locus_tag=BCEP4_390116 NZ_CAJZAV010000245.1 Protein Homology CDS 128169 129143 . + 0 ID=cds-WP_124841289.1;Parent=gene-LDO49_RS23280;Dbxref=GenBank:WP_124841289.1;Name=WP_124841289.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355157.1;locus_tag=LDO49_RS23280;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_124841289.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 129706 130812 . + . ID=gene-LDO49_RS23285;Name=LDO49_RS23285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23285;old_locus_tag=BCEP4_390118 NZ_CAJZAV010000245.1 Protein Homology CDS 129706 130812 . + 0 ID=cds-WP_059484898.1;Parent=gene-LDO49_RS23285;Dbxref=GenBank:WP_059484898.1;Name=WP_059484898.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355158.1;locus_tag=LDO49_RS23285;product=ATP-binding protein;protein_id=WP_059484898.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 130821 130997 . + . ID=gene-LDO49_RS23290;Name=LDO49_RS23290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23290;old_locus_tag=BCEP4_390119 NZ_CAJZAV010000245.1 GeneMarkS-2+ CDS 130821 130997 . + 0 ID=cds-WP_185633894.1;Parent=gene-LDO49_RS23290;Dbxref=GenBank:WP_185633894.1;Name=WP_185633894.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS23290;product=hypothetical protein;protein_id=WP_185633894.1;transl_table=11 NZ_CAJZAV010000245.1 RefSeq pseudogene 131008 132258 . + . ID=gene-LDO49_RS23295;Name=LDO49_RS23295;end_range=132258,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS23295;old_locus_tag=BCEP4_390120;partial=true;pseudo=true NZ_CAJZAV010000245.1 Protein Homology CDS 131008 132258 . + 0 ID=cds-LDO49_RS23295;Parent=gene-LDO49_RS23295;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=132258,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355159.1;locus_tag=LDO49_RS23295;partial=true;product=DUF5682 family protein;pseudo=true;transl_table=11 NZ_CAJZAV010000245.1 RefSeq gene 132527 132853 . - . ID=gene-LDO49_RS23300;Name=LDO49_RS23300;end_range=132853,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23300;old_locus_tag=BCEP4_390121;partial=true NZ_CAJZAV010000245.1 Protein Homology CDS 132527 132853 . - 0 ID=cds-WP_253074689.1;Parent=gene-LDO49_RS23300;Dbxref=GenBank:WP_253074689.1;Name=WP_253074689.1;end_range=132853,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495905.1;locus_tag=LDO49_RS23300;partial=true;product=LysR substrate-binding domain-containing protein;protein_id=WP_253074689.1;transl_table=11 ##sequence-region NZ_CAJZAV010000246.1 1 87706 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000246.1 RefSeq region 1 87706 . + . ID=NZ_CAJZAV010000246.1:1..87706;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_4 NZ_CAJZAV010000246.1 RefSeq gene 389 2464 . + . ID=gene-LDO49_RS23305;Name=LDO49_RS23305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23305;old_locus_tag=BCEP4_40001 NZ_CAJZAV010000246.1 Protein Homology CDS 389 2464 . + 0 ID=cds-WP_060072281.1;Parent=gene-LDO49_RS23305;Dbxref=GenBank:WP_060072281.1;Name=WP_060072281.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655882.1;locus_tag=LDO49_RS23305;product=molybdopterin-containing oxidoreductase family protein;protein_id=WP_060072281.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 2601 4274 . + . ID=gene-LDO49_RS23310;Name=LDO49_RS23310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23310;old_locus_tag=BCEP4_40002 NZ_CAJZAV010000246.1 Protein Homology CDS 2601 4274 . + 0 ID=cds-WP_021159923.1;Parent=gene-LDO49_RS23310;Dbxref=GenBank:WP_021159923.1;Name=WP_021159923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898193.1;locus_tag=LDO49_RS23310;product=long-chain fatty acid--CoA ligase;protein_id=WP_021159923.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 4554 5705 . - . ID=gene-LDO49_RS23315;Name=LDO49_RS23315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23315;old_locus_tag=BCEP4_40003 NZ_CAJZAV010000246.1 Protein Homology CDS 4554 5705 . - 0 ID=cds-WP_059675899.1;Parent=gene-LDO49_RS23315;Dbxref=GenBank:WP_059675899.1;Name=WP_059675899.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195141.1;locus_tag=LDO49_RS23315;product=porin;protein_id=WP_059675899.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 5983 6609 . + . ID=gene-LDO49_RS23320;Name=coq7;gbkey=Gene;gene=coq7;gene_biotype=protein_coding;locus_tag=LDO49_RS23320;old_locus_tag=BCEP4_40005 NZ_CAJZAV010000246.1 Protein Homology CDS 5983 6609 . + 0 ID=cds-WP_027788457.1;Parent=gene-LDO49_RS23320;Dbxref=GenBank:WP_027788457.1;Name=WP_027788457.1;Ontology_term=GO:0006744,GO:0004497;gbkey=CDS;gene=coq7;go_function=monooxygenase activity|0004497||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106632.1;locus_tag=LDO49_RS23320;product=2-polyprenyl-3-methyl-6-methoxy-1%2C4-benzoquinone monooxygenase;protein_id=WP_027788457.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 6996 7424 . + . ID=gene-LDO49_RS23325;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=LDO49_RS23325;old_locus_tag=BCEP4_40006 NZ_CAJZAV010000246.1 Protein Homology CDS 6996 7424 . + 0 ID=cds-WP_006487094.1;Parent=gene-LDO49_RS23325;Dbxref=GenBank:WP_006487094.1;Name=WP_006487094.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255554.1;locus_tag=LDO49_RS23325;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_006487094.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 7448 8389 . + . ID=gene-LDO49_RS23330;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=LDO49_RS23330;old_locus_tag=BCEP4_40007 NZ_CAJZAV010000246.1 Protein Homology CDS 7448 8389 . + 0 ID=cds-WP_021159920.1;Parent=gene-LDO49_RS23330;Dbxref=GenBank:WP_021159920.1;Name=WP_021159920.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350832.1;locus_tag=LDO49_RS23330;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_021159920.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 8386 8727 . + . ID=gene-LDO49_RS23335;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=LDO49_RS23335;old_locus_tag=BCEP4_40009 NZ_CAJZAV010000246.1 Protein Homology CDS 8386 8727 . + 0 ID=cds-WP_021159919.1;Parent=gene-LDO49_RS23335;Dbxref=GenBank:WP_021159919.1;Name=WP_021159919.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898189.1;locus_tag=LDO49_RS23335;product=cell division protein FtsL;protein_id=WP_021159919.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 8724 10571 . + . ID=gene-LDO49_RS23340;Name=LDO49_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23340;old_locus_tag=BCEP4_40008 NZ_CAJZAV010000246.1 Protein Homology CDS 8724 10571 . + 0 ID=cds-WP_027788455.1;Parent=gene-LDO49_RS23340;Dbxref=GenBank:WP_027788455.1;Name=WP_027788455.1;Ontology_term=GO:0009252,GO:0051301,GO:0071555,GO:0008658,GO:0008955,GO:0009002,GO:0016787,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532007.1;locus_tag=LDO49_RS23340;product=peptidoglycan D%2CD-transpeptidase FtsI family protein;protein_id=WP_027788455.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 10568 12106 . + . ID=gene-LDO49_RS23345;Name=LDO49_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23345;old_locus_tag=BCEP4_40010 NZ_CAJZAV010000246.1 Protein Homology CDS 10568 12106 . + 0 ID=cds-WP_042975357.1;Parent=gene-LDO49_RS23345;Dbxref=GenBank:WP_042975357.1;Name=WP_042975357.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602111.1;locus_tag=LDO49_RS23345;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_042975357.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 12103 13509 . + . ID=gene-LDO49_RS23350;Name=LDO49_RS23350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23350;old_locus_tag=BCEP4_40011 NZ_CAJZAV010000246.1 Protein Homology CDS 12103 13509 . + 0 ID=cds-WP_059552703.1;Parent=gene-LDO49_RS23350;Dbxref=GenBank:WP_059552703.1;Name=WP_059552703.1;Ontology_term=GO:0009252,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333460.1;locus_tag=LDO49_RS23350;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_059552703.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 13526 14695 . + . ID=gene-LDO49_RS23355;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=LDO49_RS23355;old_locus_tag=BCEP4_40012 NZ_CAJZAV010000246.1 Protein Homology CDS 13526 14695 . + 0 ID=cds-WP_006477019.1;Parent=gene-LDO49_RS23355;Dbxref=GenBank:WP_006477019.1;Name=WP_006477019.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477019.1;locus_tag=LDO49_RS23355;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_006477019.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 14724 16238 . + . ID=gene-LDO49_RS23360;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=LDO49_RS23360;old_locus_tag=BCEP4_40013 NZ_CAJZAV010000246.1 Protein Homology CDS 14724 16238 . + 0 ID=cds-WP_124475561.1;Parent=gene-LDO49_RS23360;Dbxref=GenBank:WP_124475561.1;Name=WP_124475561.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544499.1;locus_tag=LDO49_RS23360;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_124475561.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 16235 17518 . + . ID=gene-LDO49_RS23365;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=LDO49_RS23365;old_locus_tag=BCEP4_40014 NZ_CAJZAV010000246.1 Protein Homology CDS 16235 17518 . + 0 ID=cds-WP_021159916.1;Parent=gene-LDO49_RS23365;Dbxref=GenBank:WP_021159916.1;Name=WP_021159916.1;Ontology_term=GO:0009252,GO:0051301,GO:0016020;gbkey=CDS;gene=ftsW;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600547.1;locus_tag=LDO49_RS23365;product=putative lipid II flippase FtsW;protein_id=WP_021159916.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 17515 18618 . + . ID=gene-LDO49_RS23370;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=LDO49_RS23370;old_locus_tag=BCEP4_40015 NZ_CAJZAV010000246.1 Protein Homology CDS 17515 18618 . + 0 ID=cds-WP_021159915.1;Parent=gene-LDO49_RS23370;Dbxref=GenBank:WP_021159915.1;Name=WP_021159915.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416488.1;locus_tag=LDO49_RS23370;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_021159915.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 18615 20012 . + . ID=gene-LDO49_RS23375;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=LDO49_RS23375;old_locus_tag=BCEP4_40016 NZ_CAJZAV010000246.1 Protein Homology CDS 18615 20012 . + 0 ID=cds-WP_059586549.1;Parent=gene-LDO49_RS23375;Dbxref=GenBank:WP_059586549.1;Name=WP_059586549.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091239.1;locus_tag=LDO49_RS23375;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_059586549.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 20014 20955 . + . ID=gene-LDO49_RS23380;Name=LDO49_RS23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23380;old_locus_tag=BCEP4_40017 NZ_CAJZAV010000246.1 Protein Homology CDS 20014 20955 . + 0 ID=cds-WP_021159913.1;Parent=gene-LDO49_RS23380;Dbxref=GenBank:WP_021159913.1;Name=WP_021159913.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011489915.1;locus_tag=LDO49_RS23380;product=D-alanine--D-alanine ligase;protein_id=WP_021159913.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 20975 21727 . + . ID=gene-LDO49_RS23385;Name=LDO49_RS23385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23385;old_locus_tag=BCEP4_40018 NZ_CAJZAV010000246.1 Protein Homology CDS 20975 21727 . + 0 ID=cds-WP_021159912.1;Parent=gene-LDO49_RS23385;Dbxref=GenBank:WP_021159912.1;Name=WP_021159912.1;Ontology_term=GO:0043093,GO:0051301;gbkey=CDS;go_process=FtsZ-dependent cytokinesis|0043093||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522020.1;locus_tag=LDO49_RS23385;product=cell division protein FtsQ/DivIB;protein_id=WP_021159912.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 21754 22986 . + . ID=gene-LDO49_RS23390;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=LDO49_RS23390;old_locus_tag=BCEP4_40019 NZ_CAJZAV010000246.1 Protein Homology CDS 21754 22986 . + 0 ID=cds-WP_006487138.1;Parent=gene-LDO49_RS23390;Dbxref=GenBank:WP_006487138.1;Name=WP_006487138.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898179.1;locus_tag=LDO49_RS23390;product=cell division protein FtsA;protein_id=WP_006487138.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 23100 24296 . + . ID=gene-LDO49_RS23395;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=LDO49_RS23395;old_locus_tag=BCEP4_40020 NZ_CAJZAV010000246.1 Protein Homology CDS 23100 24296 . + 0 ID=cds-WP_021159911.1;Parent=gene-LDO49_RS23395;Dbxref=GenBank:WP_021159911.1;Name=WP_021159911.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020071225.1;locus_tag=LDO49_RS23395;product=cell division protein FtsZ;protein_id=WP_021159911.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 24485 24991 . + . ID=gene-LDO49_RS23400;Name=LDO49_RS23400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23400;old_locus_tag=BCEP4_40021 NZ_CAJZAV010000246.1 Protein Homology CDS 24485 24991 . + 0 ID=cds-WP_027788450.1;Parent=gene-LDO49_RS23400;Dbxref=GenBank:WP_027788450.1;Name=WP_027788450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492974.1;locus_tag=LDO49_RS23400;product=peroxiredoxin;protein_id=WP_027788450.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 25232 26149 . + . ID=gene-LDO49_RS23405;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=LDO49_RS23405;old_locus_tag=BCEP4_40022 NZ_CAJZAV010000246.1 Protein Homology CDS 25232 26149 . + 0 ID=cds-WP_027788449.1;Parent=gene-LDO49_RS23405;Dbxref=GenBank:WP_027788449.1;Name=WP_027788449.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106607.1;locus_tag=LDO49_RS23405;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_027788449.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 26230 26706 . - . ID=gene-LDO49_RS23410;Name=LDO49_RS23410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23410;old_locus_tag=BCEP4_40024 NZ_CAJZAV010000246.1 Protein Homology CDS 26230 26706 . - 0 ID=cds-WP_021159908.1;Parent=gene-LDO49_RS23410;Dbxref=GenBank:WP_021159908.1;Name=WP_021159908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025158.1;locus_tag=LDO49_RS23410;product=DUF721 domain-containing protein;protein_id=WP_021159908.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 26963 29761 . + . ID=gene-LDO49_RS23415;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=LDO49_RS23415;old_locus_tag=BCEP4_40025 NZ_CAJZAV010000246.1 Protein Homology CDS 26963 29761 . + 0 ID=cds-WP_059484641.1;Parent=gene-LDO49_RS23415;Dbxref=GenBank:WP_059484641.1;Name=WP_059484641.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544506.1;locus_tag=LDO49_RS23415;product=preprotein translocase subunit SecA;protein_id=WP_059484641.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 29904 31145 . + . ID=gene-LDO49_RS23420;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=LDO49_RS23420;old_locus_tag=BCEP4_40026 NZ_CAJZAV010000246.1 Protein Homology CDS 29904 31145 . + 0 ID=cds-WP_021159905.1;Parent=gene-LDO49_RS23420;Dbxref=GenBank:WP_021159905.1;Name=WP_021159905.1;Ontology_term=GO:0006526,GO:0004358;gbkey=CDS;gene=argJ;go_function=L-glutamate N-acetyltransferase activity%2C acting on acetyl-L-ornithine as donor|0004358||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333474.1;locus_tag=LDO49_RS23420;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;protein_id=WP_021159905.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 31165 32034 . + . ID=gene-LDO49_RS23425;Name=LDO49_RS23425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23425;old_locus_tag=BCEP4_40027 NZ_CAJZAV010000246.1 Protein Homology CDS 31165 32034 . + 0 ID=cds-WP_021159904.1;Parent=gene-LDO49_RS23425;Dbxref=GenBank:WP_021159904.1;Name=WP_021159904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350849.1;locus_tag=LDO49_RS23425;product=ATP-binding protein;protein_id=WP_021159904.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 32031 32474 . + . ID=gene-LDO49_RS23430;Name=LDO49_RS23430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23430;old_locus_tag=BCEP4_40028 NZ_CAJZAV010000246.1 Protein Homology CDS 32031 32474 . + 0 ID=cds-WP_021159903.1;Parent=gene-LDO49_RS23430;Dbxref=GenBank:WP_021159903.1;Name=WP_021159903.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487137.1;locus_tag=LDO49_RS23430;product=NUDIX domain-containing protein;protein_id=WP_021159903.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 32547 32747 . - . ID=gene-LDO49_RS23435;Name=LDO49_RS23435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23435;old_locus_tag=BCEP4_40029 NZ_CAJZAV010000246.1 Protein Homology CDS 32547 32747 . - 0 ID=cds-WP_021159902.1;Parent=gene-LDO49_RS23435;Dbxref=GenBank:WP_021159902.1;Name=WP_021159902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544509.1;locus_tag=LDO49_RS23435;product=DNA gyrase inhibitor YacG;protein_id=WP_021159902.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 32776 33531 . - . ID=gene-LDO49_RS23440;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=LDO49_RS23440;old_locus_tag=BCEP4_40030 NZ_CAJZAV010000246.1 Protein Homology CDS 32776 33531 . - 0 ID=cds-WP_021159901.1;Parent=gene-LDO49_RS23440;Dbxref=GenBank:WP_021159901.1;Name=WP_021159901.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756831.1;locus_tag=LDO49_RS23440;product=cell division protein ZapD;protein_id=WP_021159901.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 33641 34249 . - . ID=gene-LDO49_RS23445;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=LDO49_RS23445;old_locus_tag=BCEP4_40031 NZ_CAJZAV010000246.1 Protein Homology CDS 33641 34249 . - 0 ID=cds-WP_060194641.1;Parent=gene-LDO49_RS23445;Dbxref=GenBank:WP_060194641.1;Name=WP_060194641.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487123.1;locus_tag=LDO49_RS23445;product=dephospho-CoA kinase;protein_id=WP_060194641.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 34251 35162 . - . ID=gene-LDO49_RS23450;Name=LDO49_RS23450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23450;old_locus_tag=BCEP4_40032 NZ_CAJZAV010000246.1 Protein Homology CDS 34251 35162 . - 0 ID=cds-WP_059710026.1;Parent=gene-LDO49_RS23450;Dbxref=GenBank:WP_059710026.1;Name=WP_059710026.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214178.1;locus_tag=LDO49_RS23450;product=prepilin peptidase;protein_id=WP_059710026.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 35209 36420 . - . ID=gene-LDO49_RS23455;Name=LDO49_RS23455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23455;old_locus_tag=BCEP4_40033 NZ_CAJZAV010000246.1 Protein Homology CDS 35209 36420 . - 0 ID=cds-WP_060375608.1;Parent=gene-LDO49_RS23455;Dbxref=GenBank:WP_060375608.1;Name=WP_060375608.1;Ontology_term=GO:0015628,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350855.1;locus_tag=LDO49_RS23455;product=type II secretion system F family protein;protein_id=WP_060375608.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 36417 37694 . - . ID=gene-LDO49_RS23460;Name=LDO49_RS23460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23460;old_locus_tag=BCEP4_40034 NZ_CAJZAV010000246.1 Protein Homology CDS 36417 37694 . - 0 ID=cds-WP_021159897.1;Parent=gene-LDO49_RS23460;Dbxref=GenBank:WP_021159897.1;Name=WP_021159897.1;Ontology_term=GO:0009306,GO:0005524,GO:0016887,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752230.1;locus_tag=LDO49_RS23460;product=GspE/PulE family protein;protein_id=WP_021159897.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 37778 39070 . - . ID=gene-LDO49_RS23465;Name=LDO49_RS23465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23465;old_locus_tag=BCEP4_40035 NZ_CAJZAV010000246.1 Protein Homology CDS 37778 39070 . - 0 ID=cds-WP_021159896.1;Parent=gene-LDO49_RS23465;Dbxref=GenBank:WP_021159896.1;Name=WP_021159896.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489250.1;locus_tag=LDO49_RS23465;product=HlyC/CorC family transporter;protein_id=WP_021159896.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 39212 39288 . - . ID=gene-LDO49_RS23470;Name=LDO49_RS23470;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS23470;old_locus_tag=BCEP4_TRNA54 NZ_CAJZAV010000246.1 tRNAscan-SE tRNA 39212 39288 . - . ID=rna-LDO49_RS23470;Parent=gene-LDO49_RS23470;anticodon=(pos:complement(39252..39254));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS23470;product=tRNA-Pro NZ_CAJZAV010000246.1 tRNAscan-SE exon 39212 39288 . - . ID=exon-LDO49_RS23470-1;Parent=rna-LDO49_RS23470;anticodon=(pos:complement(39252..39254));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS23470;product=tRNA-Pro NZ_CAJZAV010000246.1 RefSeq gene 39466 40461 . - . ID=gene-LDO49_RS23475;Name=LDO49_RS23475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23475;old_locus_tag=BCEP4_40037 NZ_CAJZAV010000246.1 Protein Homology CDS 39466 40461 . - 0 ID=cds-WP_042975355.1;Parent=gene-LDO49_RS23475;Dbxref=GenBank:WP_042975355.1;Name=WP_042975355.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091260.1;locus_tag=LDO49_RS23475;product=polyprenyl synthetase family protein;protein_id=WP_042975355.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 40672 40983 . + . ID=gene-LDO49_RS23480;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=LDO49_RS23480;old_locus_tag=BCEP4_40039 NZ_CAJZAV010000246.1 Protein Homology CDS 40672 40983 . + 0 ID=cds-WP_006025184.1;Parent=gene-LDO49_RS23480;Dbxref=GenBank:WP_006025184.1;Name=WP_006025184.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011902040.1;locus_tag=LDO49_RS23480;product=50S ribosomal protein L21;protein_id=WP_006025184.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 41008 41271 . + . ID=gene-LDO49_RS23485;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=LDO49_RS23485;old_locus_tag=BCEP4_40040 NZ_CAJZAV010000246.1 Protein Homology CDS 41008 41271 . + 0 ID=cds-WP_006476999.1;Parent=gene-LDO49_RS23485;Dbxref=GenBank:WP_006476999.1;Name=WP_006476999.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194025.1;locus_tag=LDO49_RS23485;product=50S ribosomal protein L27;protein_id=WP_006476999.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 41460 42572 . + . ID=gene-LDO49_RS23490;Name=obgE;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;locus_tag=LDO49_RS23490;old_locus_tag=BCEP4_40041 NZ_CAJZAV010000246.1 Protein Homology CDS 41460 42572 . + 0 ID=cds-WP_059860618.1;Parent=gene-LDO49_RS23490;Dbxref=GenBank:WP_059860618.1;Name=WP_059860618.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=obgE;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400418.1;locus_tag=LDO49_RS23490;product=GTPase ObgE;protein_id=WP_059860618.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 42663 43781 . + . ID=gene-LDO49_RS23495;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=LDO49_RS23495;old_locus_tag=BCEP4_40042 NZ_CAJZAV010000246.1 Protein Homology CDS 42663 43781 . + 0 ID=cds-WP_027788436.1;Parent=gene-LDO49_RS23495;Dbxref=GenBank:WP_027788436.1;Name=WP_027788436.1;Ontology_term=GO:0055129,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013340556.1;locus_tag=LDO49_RS23495;product=glutamate 5-kinase;protein_id=WP_027788436.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 43886 44494 . - . ID=gene-LDO49_RS23500;Name=LDO49_RS23500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23500;old_locus_tag=BCEP4_40043 NZ_CAJZAV010000246.1 Protein Homology CDS 43886 44494 . - 0 ID=cds-WP_034195819.1;Parent=gene-LDO49_RS23500;Dbxref=GenBank:WP_034195819.1;Name=WP_034195819.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400416.1;locus_tag=LDO49_RS23500;product=CNP1-like family protein;protein_id=WP_034195819.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 44508 45155 . - . ID=gene-LDO49_RS23505;Name=LDO49_RS23505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23505;old_locus_tag=BCEP4_40044 NZ_CAJZAV010000246.1 Protein Homology CDS 44508 45155 . - 0 ID=cds-WP_048026088.1;Parent=gene-LDO49_RS23505;Dbxref=GenBank:WP_048026088.1;Name=WP_048026088.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350862.1;locus_tag=LDO49_RS23505;product=RNA pyrophosphohydrolase;protein_id=WP_048026088.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 45384 47120 . + . ID=gene-LDO49_RS23510;Name=LDO49_RS23510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23510;old_locus_tag=BCEP4_40045 NZ_CAJZAV010000246.1 Protein Homology CDS 45384 47120 . + 0 ID=cds-WP_021159892.1;Parent=gene-LDO49_RS23510;Dbxref=GenBank:WP_021159892.1;Name=WP_021159892.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA deacylase activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012434396.1;locus_tag=LDO49_RS23510;product=proline--tRNA ligase;protein_id=WP_021159892.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 47142 47744 . + . ID=gene-LDO49_RS23515;Name=LDO49_RS23515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23515;old_locus_tag=BCEP4_40046 NZ_CAJZAV010000246.1 Protein Homology CDS 47142 47744 . + 0 ID=cds-WP_009688453.1;Parent=gene-LDO49_RS23515;Dbxref=GenBank:WP_009688453.1;Name=WP_009688453.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194061.1;locus_tag=LDO49_RS23515;product=MarC family protein;protein_id=WP_009688453.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 47824 48375 . - . ID=gene-LDO49_RS23520;Name=LDO49_RS23520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23520;old_locus_tag=BCEP4_40047 NZ_CAJZAV010000246.1 Protein Homology CDS 47824 48375 . - 0 ID=cds-WP_021159891.1;Parent=gene-LDO49_RS23520;Dbxref=GenBank:WP_021159891.1;Name=WP_021159891.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025192.1;locus_tag=LDO49_RS23520;product=hypoxanthine-guanine phosphoribosyltransferase;protein_id=WP_021159891.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 48470 49837 . - . ID=gene-LDO49_RS23525;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=LDO49_RS23525;old_locus_tag=BCEP4_40048 NZ_CAJZAV010000246.1 Protein Homology CDS 48470 49837 . - 0 ID=cds-WP_048026091.1;Parent=gene-LDO49_RS23525;Dbxref=GenBank:WP_048026091.1;Name=WP_048026091.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194338.1;locus_tag=LDO49_RS23525;product=signal recognition particle protein;protein_id=WP_048026091.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 49927 50820 . + . ID=gene-LDO49_RS23530;Name=LDO49_RS23530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23530;old_locus_tag=BCEP4_40049 NZ_CAJZAV010000246.1 Protein Homology CDS 49927 50820 . + 0 ID=cds-WP_027788432.1;Parent=gene-LDO49_RS23530;Dbxref=GenBank:WP_027788432.1;Name=WP_027788432.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538773.1;locus_tag=LDO49_RS23530;product=cytochrome C assembly family protein;protein_id=WP_027788432.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 50834 51151 . + . ID=gene-LDO49_RS23535;Name=LDO49_RS23535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23535;old_locus_tag=BCEP4_40050 NZ_CAJZAV010000246.1 Protein Homology CDS 50834 51151 . + 0 ID=cds-WP_124843747.1;Parent=gene-LDO49_RS23535;Dbxref=GenBank:WP_124843747.1;Name=WP_124843747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491491.1;locus_tag=LDO49_RS23535;product=PP0621 family protein;protein_id=WP_124843747.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 51151 51741 . + . ID=gene-LDO49_RS23540;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=LDO49_RS23540;old_locus_tag=BCEP4_40051 NZ_CAJZAV010000246.1 Protein Homology CDS 51151 51741 . + 0 ID=cds-WP_021161899.1;Parent=gene-LDO49_RS23540;Dbxref=GenBank:WP_021161899.1;Name=WP_021161899.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752243.1;locus_tag=LDO49_RS23540;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_021161899.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 52193 55183 . + . ID=gene-LDO49_RS23545;Name=LDO49_RS23545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23545;old_locus_tag=BCEP4_40052 NZ_CAJZAV010000246.1 Protein Homology CDS 52193 55183 . + 0 ID=cds-WP_021161897.1;Parent=gene-LDO49_RS23545;Dbxref=GenBank:WP_021161897.1;Name=WP_021161897.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544523.1;locus_tag=LDO49_RS23545;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_021161897.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 55549 56760 . + . ID=gene-LDO49_RS23550;Name=LDO49_RS23550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23550;old_locus_tag=BCEP4_40053 NZ_CAJZAV010000246.1 Protein Homology CDS 55549 56760 . + 0 ID=cds-WP_014898151.1;Parent=gene-LDO49_RS23550;Dbxref=GenBank:WP_014898151.1;Name=WP_014898151.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194129.1;locus_tag=LDO49_RS23550;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_014898151.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 56844 57170 . + . ID=gene-LDO49_RS23555;Name=LDO49_RS23555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23555 NZ_CAJZAV010000246.1 Protein Homology CDS 56844 57170 . + 0 ID=cds-WP_124843745.1;Parent=gene-LDO49_RS23555;Dbxref=GenBank:WP_124843745.1;Name=WP_124843745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091277.1;locus_tag=LDO49_RS23555;product=hypothetical protein;protein_id=WP_124843745.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 57199 57867 . + . ID=gene-LDO49_RS23560;Name=LDO49_RS23560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23560;old_locus_tag=BCEP4_40054 NZ_CAJZAV010000246.1 Protein Homology CDS 57199 57867 . + 0 ID=cds-WP_021161894.1;Parent=gene-LDO49_RS23560;Dbxref=GenBank:WP_021161894.1;Name=WP_021161894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400402.1;locus_tag=LDO49_RS23560;product=histone H1-like DNA-binding protein;protein_id=WP_021161894.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 58134 58607 . - . ID=gene-LDO49_RS23565;Name=LDO49_RS23565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23565;old_locus_tag=BCEP4_40055 NZ_CAJZAV010000246.1 Protein Homology CDS 58134 58607 . - 0 ID=cds-WP_021161893.1;Parent=gene-LDO49_RS23565;Dbxref=GenBank:WP_021161893.1;Name=WP_021161893.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601283.1;locus_tag=LDO49_RS23565;product=glycine zipper 2TM domain-containing protein;protein_id=WP_021161893.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 58627 59565 . - . ID=gene-LDO49_RS23570;Name=LDO49_RS23570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23570;old_locus_tag=BCEP4_40056 NZ_CAJZAV010000246.1 Protein Homology CDS 58627 59565 . - 0 ID=cds-WP_021161892.1;Parent=gene-LDO49_RS23570;Dbxref=GenBank:WP_021161892.1;Name=WP_021161892.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602176.1;locus_tag=LDO49_RS23570;product=carbohydrate kinase family protein;protein_id=WP_021161892.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 59651 60154 . - . ID=gene-LDO49_RS23575;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=LDO49_RS23575;old_locus_tag=BCEP4_40057 NZ_CAJZAV010000246.1 Protein Homology CDS 59651 60154 . - 0 ID=cds-WP_027783488.1;Parent=gene-LDO49_RS23575;Dbxref=GenBank:WP_027783488.1;Name=WP_027783488.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765230.1;locus_tag=LDO49_RS23575;product=thiol peroxidase;protein_id=WP_027783488.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 60228 61577 . - . ID=gene-LDO49_RS23580;Name=LDO49_RS23580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23580;old_locus_tag=BCEP4_40058 NZ_CAJZAV010000246.1 Protein Homology CDS 60228 61577 . - 0 ID=cds-WP_124843743.1;Parent=gene-LDO49_RS23580;Dbxref=GenBank:WP_124843743.1;Name=WP_124843743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496753.1;locus_tag=LDO49_RS23580;product=zinc-ribbon and DUF3426 domain-containing protein;protein_id=WP_124843743.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 61623 62525 . - . ID=gene-LDO49_RS23585;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=LDO49_RS23585;old_locus_tag=BCEP4_40059 NZ_CAJZAV010000246.1 Protein Homology CDS 61623 62525 . - 0 ID=cds-WP_021161891.1;Parent=gene-LDO49_RS23585;Dbxref=GenBank:WP_021161891.1;Name=WP_021161891.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490720.1;locus_tag=LDO49_RS23585;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_021161891.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 62528 63895 . - . ID=gene-LDO49_RS23590;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=LDO49_RS23590;old_locus_tag=BCEP4_40060 NZ_CAJZAV010000246.1 Protein Homology CDS 62528 63895 . - 0 ID=cds-WP_021161890.1;Parent=gene-LDO49_RS23590;Dbxref=GenBank:WP_021161890.1;Name=WP_021161890.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777083.1;locus_tag=LDO49_RS23590;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_021161890.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 63978 64451 . - . ID=gene-LDO49_RS23595;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=LDO49_RS23595;old_locus_tag=BCEP4_40061 NZ_CAJZAV010000246.1 Protein Homology CDS 63978 64451 . - 0 ID=cds-WP_021161889.1;Parent=gene-LDO49_RS23595;Dbxref=GenBank:WP_021161889.1;Name=WP_021161889.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009888964.1;locus_tag=LDO49_RS23595;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_021161889.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 64518 64970 . - . ID=gene-LDO49_RS23600;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=LDO49_RS23600;old_locus_tag=BCEP4_40062 NZ_CAJZAV010000246.1 Protein Homology CDS 64518 64970 . - 0 ID=cds-WP_011350880.1;Parent=gene-LDO49_RS23600;Dbxref=GenBank:WP_011350880.1;Name=WP_011350880.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756005.1;locus_tag=LDO49_RS23600;product=type II 3-dehydroquinate dehydratase;protein_id=WP_011350880.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 65165 65716 . - . ID=gene-LDO49_RS23605;Name=LDO49_RS23605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23605;old_locus_tag=BCEP4_40063 NZ_CAJZAV010000246.1 Protein Homology CDS 65165 65716 . - 0 ID=cds-WP_021161888.1;Parent=gene-LDO49_RS23605;Dbxref=GenBank:WP_021161888.1;Name=WP_021161888.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496749.1;locus_tag=LDO49_RS23605;product=TlpA family protein disulfide reductase;protein_id=WP_021161888.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 65724 66368 . - . ID=gene-LDO49_RS23610;Name=LDO49_RS23610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23610;old_locus_tag=BCEP4_40065 NZ_CAJZAV010000246.1 Protein Homology CDS 65724 66368 . - 0 ID=cds-WP_042976655.1;Parent=gene-LDO49_RS23610;Dbxref=GenBank:WP_042976655.1;Name=WP_042976655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214153.1;locus_tag=LDO49_RS23610;product=hypothetical protein;protein_id=WP_042976655.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 66411 68000 . + . ID=gene-LDO49_RS23615;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=LDO49_RS23615;old_locus_tag=BCEP4_40064 NZ_CAJZAV010000246.1 Protein Homology CDS 66411 68000 . + 0 ID=cds-WP_224052407.1;Parent=gene-LDO49_RS23615;Dbxref=GenBank:WP_224052407.1;Name=WP_224052407.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018006316.1;locus_tag=LDO49_RS23615;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_224052407.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 67997 68566 . + . ID=gene-LDO49_RS23620;Name=LDO49_RS23620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23620;old_locus_tag=BCEP4_40066 NZ_CAJZAV010000246.1 Protein Homology CDS 67997 68566 . + 0 ID=cds-WP_048026099.1;Parent=gene-LDO49_RS23620;Dbxref=GenBank:WP_048026099.1;Name=WP_048026099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350884.1;locus_tag=LDO49_RS23620;product=YqiA/YcfP family alpha/beta fold hydrolase;protein_id=WP_048026099.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 68647 70743 . + . ID=gene-LDO49_RS23625;Name=LDO49_RS23625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23625;old_locus_tag=BCEP4_40067 NZ_CAJZAV010000246.1 Protein Homology CDS 68647 70743 . + 0 ID=cds-WP_124475554.1;Parent=gene-LDO49_RS23625;Dbxref=GenBank:WP_124475554.1;Name=WP_124475554.1;Ontology_term=GO:0006401,GO:0003723,GO:0016896;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363053.1;locus_tag=LDO49_RS23625;product=ribonuclease catalytic domain-containing protein;protein_id=WP_124475554.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 70740 71606 . + . ID=gene-LDO49_RS23630;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=LDO49_RS23630;old_locus_tag=BCEP4_40068 NZ_CAJZAV010000246.1 Protein Homology CDS 70740 71606 . + 0 ID=cds-WP_021161883.1;Parent=gene-LDO49_RS23630;Dbxref=GenBank:WP_021161883.1;Name=WP_021161883.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214150.1;locus_tag=LDO49_RS23630;product=shikimate dehydrogenase;protein_id=WP_021161883.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 71621 72358 . + . ID=gene-LDO49_RS23635;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=LDO49_RS23635;old_locus_tag=BCEP4_40069 NZ_CAJZAV010000246.1 Protein Homology CDS 71621 72358 . + 0 ID=cds-WP_042976647.1;Parent=gene-LDO49_RS23635;Dbxref=GenBank:WP_042976647.1;Name=WP_042976647.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350887.1;locus_tag=LDO49_RS23635;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_042976647.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 72806 74416 . + . ID=gene-LDO49_RS23640;Name=LDO49_RS23640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23640;old_locus_tag=BCEP4_40071 NZ_CAJZAV010000246.1 Protein Homology CDS 72806 74416 . + 0 ID=cds-WP_060054654.1;Parent=gene-LDO49_RS23640;Dbxref=GenBank:WP_060054654.1;Name=WP_060054654.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544540.1;locus_tag=LDO49_RS23640;product=S10 family peptidase;protein_id=WP_060054654.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 74496 74894 . + . ID=gene-LDO49_RS23645;Name=LDO49_RS23645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23645;old_locus_tag=BCEP4_40072 NZ_CAJZAV010000246.1 Protein Homology CDS 74496 74894 . + 0 ID=cds-WP_021161880.1;Parent=gene-LDO49_RS23645;Dbxref=GenBank:WP_021161880.1;Name=WP_021161880.1;Ontology_term=GO:0005509;gbkey=CDS;go_function=calcium ion binding|0005509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544541.1;locus_tag=LDO49_RS23645;product=EF-hand domain-containing protein;protein_id=WP_021161880.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 75244 76143 . + . ID=gene-LDO49_RS23650;Name=LDO49_RS23650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23650;old_locus_tag=BCEP4_40074 NZ_CAJZAV010000246.1 Protein Homology CDS 75244 76143 . + 0 ID=cds-WP_124475553.1;Parent=gene-LDO49_RS23650;Dbxref=GenBank:WP_124475553.1;Name=WP_124475553.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755792.1;locus_tag=LDO49_RS23650;product=IclR family transcriptional regulator;protein_id=WP_124475553.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 76140 77165 . + . ID=gene-LDO49_RS23655;Name=LDO49_RS23655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23655;old_locus_tag=BCEP4_40075 NZ_CAJZAV010000246.1 Protein Homology CDS 76140 77165 . + 0 ID=cds-WP_124475552.1;Parent=gene-LDO49_RS23655;Dbxref=GenBank:WP_124475552.1;Name=WP_124475552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544542.1;locus_tag=LDO49_RS23655;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_124475552.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 77188 77865 . + . ID=gene-LDO49_RS23660;Name=LDO49_RS23660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23660;old_locus_tag=BCEP4_40076 NZ_CAJZAV010000246.1 Protein Homology CDS 77188 77865 . + 0 ID=cds-WP_059484625.1;Parent=gene-LDO49_RS23660;Dbxref=GenBank:WP_059484625.1;Name=WP_059484625.1;Ontology_term=GO:0034194,GO:0008674;gbkey=CDS;go_function=2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity|0008674||IEA;go_process=D-galactonate catabolic process|0034194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333520.1;locus_tag=LDO49_RS23660;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_059484625.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 77865 78644 . + . ID=gene-LDO49_RS23665;Name=LDO49_RS23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23665;old_locus_tag=BCEP4_40077 NZ_CAJZAV010000246.1 Protein Homology CDS 77865 78644 . + 0 ID=cds-WP_124475562.1;Parent=gene-LDO49_RS23665;Dbxref=GenBank:WP_124475562.1;Name=WP_124475562.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527760.1;locus_tag=LDO49_RS23665;product=SDR family oxidoreductase;protein_id=WP_124475562.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 78755 79750 . + . ID=gene-LDO49_RS23670;Name=LDO49_RS23670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23670;old_locus_tag=BCEP4_40079 NZ_CAJZAV010000246.1 Protein Homology CDS 78755 79750 . + 0 ID=cds-WP_048026110.1;Parent=gene-LDO49_RS23670;Dbxref=GenBank:WP_048026110.1;Name=WP_048026110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761975.1;locus_tag=LDO49_RS23670;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_048026110.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 79819 81330 . + . ID=gene-LDO49_RS23675;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=LDO49_RS23675;old_locus_tag=BCEP4_40078 NZ_CAJZAV010000246.1 Protein Homology CDS 79819 81330 . + 0 ID=cds-WP_021161874.1;Parent=gene-LDO49_RS23675;Dbxref=GenBank:WP_021161874.1;Name=WP_021161874.1;Ontology_term=GO:0042882,GO:0005524,GO:0015612,GO:0016020;gbkey=CDS;gene=araG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type L-arabinose transporter activity|0015612||IEA;go_process=L-arabinose transmembrane transport|0042882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350895.1;locus_tag=LDO49_RS23675;product=L-arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_021161874.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 81401 82417 . + . ID=gene-LDO49_RS23680;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=LDO49_RS23680;old_locus_tag=BCEP4_40080 NZ_CAJZAV010000246.1 Protein Homology CDS 81401 82417 . + 0 ID=cds-WP_048026113.1;Parent=gene-LDO49_RS23680;Dbxref=GenBank:WP_048026113.1;Name=WP_048026113.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=araH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025224.1;locus_tag=LDO49_RS23680;product=L-arabinose ABC transporter permease AraH;protein_id=WP_048026113.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 82447 83253 . + . ID=gene-LDO49_RS23685;Name=LDO49_RS23685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23685;old_locus_tag=BCEP4_40081 NZ_CAJZAV010000246.1 Protein Homology CDS 82447 83253 . + 0 ID=cds-WP_124843739.1;Parent=gene-LDO49_RS23685;Dbxref=GenBank:WP_124843739.1;Name=WP_124843739.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400374.1;locus_tag=LDO49_RS23685;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_124843739.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 83303 84364 . + . ID=gene-LDO49_RS23690;Name=LDO49_RS23690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23690;old_locus_tag=BCEP4_40082 NZ_CAJZAV010000246.1 Protein Homology CDS 83303 84364 . + 0 ID=cds-WP_048026117.1;Parent=gene-LDO49_RS23690;Dbxref=GenBank:WP_048026117.1;Name=WP_048026117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476953.1;locus_tag=LDO49_RS23690;product=aldose 1-epimerase;protein_id=WP_048026117.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 84404 85231 . + . ID=gene-LDO49_RS23695;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=LDO49_RS23695;old_locus_tag=BCEP4_40083 NZ_CAJZAV010000246.1 Protein Homology CDS 84404 85231 . + 0 ID=cds-WP_021161870.1;Parent=gene-LDO49_RS23695;Dbxref=GenBank:WP_021161870.1;Name=WP_021161870.1;Ontology_term=GO:0006221,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009971072.1;locus_tag=LDO49_RS23695;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_021161870.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq pseudogene 85473 86527 . + . ID=gene-LDO49_RS23700;Name=LDO49_RS23700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS23700;old_locus_tag=BCEP4_40085;pseudo=true NZ_CAJZAV010000246.1 Protein Homology CDS 85473 86527 . + 0 ID=cds-LDO49_RS23700;Parent=gene-LDO49_RS23700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476951.1;locus_tag=LDO49_RS23700;product=haloacid dehalogenase-like hydrolase;pseudo=true;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 86565 87065 . - . ID=gene-LDO49_RS23705;Name=LDO49_RS23705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23705;old_locus_tag=BCEP4_40086 NZ_CAJZAV010000246.1 Protein Homology CDS 86565 87065 . - 0 ID=cds-WP_021161868.1;Parent=gene-LDO49_RS23705;Dbxref=GenBank:WP_021161868.1;Name=WP_021161868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333528.1;locus_tag=LDO49_RS23705;product=CinA family protein;protein_id=WP_021161868.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq gene 87097 87648 . - . ID=gene-LDO49_RS23710;Name=LDO49_RS23710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23710;old_locus_tag=BCEP4_40087 NZ_CAJZAV010000246.1 Protein Homology CDS 87097 87648 . - 0 ID=cds-WP_060072243.1;Parent=gene-LDO49_RS23710;Dbxref=GenBank:WP_060072243.1;Name=WP_060072243.1;Ontology_term=GO:0006644,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=phospholipid metabolic process|0006644||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415689.1;locus_tag=LDO49_RS23710;product=phosphatidylglycerophosphatase A family protein;protein_id=WP_060072243.1;transl_table=11 NZ_CAJZAV010000246.1 RefSeq pseudogene 87638 87706 . - . ID=gene-LDO49_RS37430;Name=LDO49_RS37430;end_range=87706,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37430;partial=true;pseudo=true NZ_CAJZAV010000246.1 Protein Homology CDS 87638 87706 . - 0 ID=cds-LDO49_RS37430;Parent=gene-LDO49_RS37430;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=87706,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496735.1;locus_tag=LDO49_RS37430;partial=true;product=thiamine monophosphate kinase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000247.1 1 19456 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000247.1 RefSeq region 1 19456 . + . ID=NZ_CAJZAV010000247.1:1..19456;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_40 NZ_CAJZAV010000247.1 RefSeq gene 354 1052 . + . ID=gene-LDO49_RS23720;Name=LDO49_RS23720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23720;old_locus_tag=BCEP4_400001 NZ_CAJZAV010000247.1 Protein Homology CDS 354 1052 . + 0 ID=cds-WP_060074294.1;Parent=gene-LDO49_RS23720;Dbxref=GenBank:WP_060074294.1;Name=WP_060074294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069035.1;locus_tag=LDO49_RS23720;product=beta-ketoacyl synthase chain length factor;protein_id=WP_060074294.1;transl_table=11 NZ_CAJZAV010000247.1 RefSeq gene 1036 1830 . + . ID=gene-LDO49_RS23725;Name=LDO49_RS23725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23725;old_locus_tag=BCEP4_400002 NZ_CAJZAV010000247.1 Protein Homology CDS 1036 1830 . + 0 ID=cds-WP_060074296.1;Parent=gene-LDO49_RS23725;Dbxref=GenBank:WP_060074296.1;Name=WP_060074296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758586.1;locus_tag=LDO49_RS23725;product=lysophospholipid acyltransferase family protein;protein_id=WP_060074296.1;transl_table=11 NZ_CAJZAV010000247.1 RefSeq gene 1805 2110 . + . ID=gene-LDO49_RS23730;Name=LDO49_RS23730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23730;old_locus_tag=BCEP4_400003 NZ_CAJZAV010000247.1 Protein Homology CDS 1805 2110 . + 0 ID=cds-WP_060074298.1;Parent=gene-LDO49_RS23730;Dbxref=GenBank:WP_060074298.1;Name=WP_060074298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402450.1;locus_tag=LDO49_RS23730;product=phosphopantetheine-binding protein;protein_id=WP_060074298.1;transl_table=11 NZ_CAJZAV010000247.1 RefSeq gene 2107 2355 . + . ID=gene-LDO49_RS23735;Name=LDO49_RS23735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23735;old_locus_tag=BCEP4_400004 NZ_CAJZAV010000247.1 Protein Homology CDS 2107 2355 . + 0 ID=cds-WP_060074301.1;Parent=gene-LDO49_RS23735;Dbxref=GenBank:WP_060074301.1;Name=WP_060074301.1;Ontology_term=GO:0006633;gbkey=CDS;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658620.1;locus_tag=LDO49_RS23735;product=acyl carrier protein;protein_id=WP_060074301.1;transl_table=11 NZ_CAJZAV010000247.1 RefSeq gene 2358 2993 . + . ID=gene-LDO49_RS23740;Name=LDO49_RS23740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23740;old_locus_tag=BCEP4_400005 NZ_CAJZAV010000247.1 Protein Homology CDS 2358 2993 . + 0 ID=cds-WP_060074330.1;Parent=gene-LDO49_RS23740;Dbxref=GenBank:WP_060074330.1;Name=WP_060074330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403745.1;locus_tag=LDO49_RS23740;product=hypothetical protein;protein_id=WP_060074330.1;transl_table=11 NZ_CAJZAV010000247.1 RefSeq gene 2990 4678 . + . ID=gene-LDO49_RS23745;Name=LDO49_RS23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23745;old_locus_tag=BCEP4_400006 NZ_CAJZAV010000247.1 Protein Homology CDS 2990 4678 . + 0 ID=cds-WP_060074303.1;Parent=gene-LDO49_RS23745;Dbxref=GenBank:WP_060074303.1;Name=WP_060074303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012434031.1;locus_tag=LDO49_RS23745;product=AMP-binding protein;protein_id=WP_060074303.1;transl_table=11 NZ_CAJZAV010000247.1 RefSeq gene 4678 6384 . + . ID=gene-LDO49_RS23750;Name=LDO49_RS23750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23750;old_locus_tag=BCEP4_400007 NZ_CAJZAV010000247.1 Protein Homology CDS 4678 6384 . + 0 ID=cds-WP_224052408.1;Parent=gene-LDO49_RS23750;Dbxref=GenBank:WP_224052408.1;Name=WP_224052408.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758591.1;locus_tag=LDO49_RS23750;product=glycosyltransferase family 2 protein;protein_id=WP_224052408.1;transl_table=11 NZ_CAJZAV010000247.1 RefSeq gene 6371 7981 . + . ID=gene-LDO49_RS23755;Name=LDO49_RS23755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23755;old_locus_tag=BCEP4_400008 NZ_CAJZAV010000247.1 Protein Homology CDS 6371 7981 . + 0 ID=cds-WP_060074333.1;Parent=gene-LDO49_RS23755;Dbxref=GenBank:WP_060074333.1;Name=WP_060074333.1;Ontology_term=GO:0170035,GO:0016841;gbkey=CDS;go_function=ammonia-lyase activity|0016841||IEA;go_process=L-amino acid catabolic process|0170035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415743.1;locus_tag=LDO49_RS23755;product=HAL/PAL/TAL family ammonia-lyase;protein_id=WP_060074333.1;transl_table=11 NZ_CAJZAV010000247.1 RefSeq gene 7978 8406 . + . ID=gene-LDO49_RS23760;Name=LDO49_RS23760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23760;old_locus_tag=BCEP4_400009 NZ_CAJZAV010000247.1 Protein Homology CDS 7978 8406 . + 0 ID=cds-WP_060074308.1;Parent=gene-LDO49_RS23760;Dbxref=GenBank:WP_060074308.1;Name=WP_060074308.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880092.1;locus_tag=LDO49_RS23760;product=acyl-CoA thioesterase;protein_id=WP_060074308.1;transl_table=11 NZ_CAJZAV010000247.1 RefSeq gene 8397 9062 . + . ID=gene-LDO49_RS23765;Name=LDO49_RS23765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23765;old_locus_tag=BCEP4_400010 NZ_CAJZAV010000247.1 Protein Homology CDS 8397 9062 . + 0 ID=cds-WP_060074310.1;Parent=gene-LDO49_RS23765;Dbxref=GenBank:WP_060074310.1;Name=WP_060074310.1;Ontology_term=GO:0042953,GO:0044874,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=lipoprotein transport|0042953||IEA,lipoprotein localization to outer membrane|0044874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415771.1;locus_tag=LDO49_RS23765;product=outer membrane lipoprotein carrier protein LolA;protein_id=WP_060074310.1;transl_table=11 NZ_CAJZAV010000247.1 RefSeq gene 9062 11470 . + . ID=gene-LDO49_RS23770;Name=LDO49_RS23770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23770;old_locus_tag=BCEP4_400011 NZ_CAJZAV010000247.1 Protein Homology CDS 9062 11470 . + 0 ID=cds-WP_060074312.1;Parent=gene-LDO49_RS23770;Dbxref=GenBank:WP_060074312.1;Name=WP_060074312.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402442.1;locus_tag=LDO49_RS23770;product=MMPL family transporter;protein_id=WP_060074312.1;transl_table=11 NZ_CAJZAV010000247.1 RefSeq gene 11467 12654 . + . ID=gene-LDO49_RS23775;Name=LDO49_RS23775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23775;old_locus_tag=BCEP4_400012 NZ_CAJZAV010000247.1 Protein Homology CDS 11467 12654 . + 0 ID=cds-WP_060074314.1;Parent=gene-LDO49_RS23775;Dbxref=GenBank:WP_060074314.1;Name=WP_060074314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880095.1;locus_tag=LDO49_RS23775;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;protein_id=WP_060074314.1;transl_table=11 NZ_CAJZAV010000247.1 RefSeq gene 12656 13159 . + . ID=gene-LDO49_RS23780;Name=LDO49_RS23780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23780;old_locus_tag=BCEP4_400013 NZ_CAJZAV010000247.1 Protein Homology CDS 12656 13159 . + 0 ID=cds-WP_060074316.1;Parent=gene-LDO49_RS23780;Dbxref=GenBank:WP_060074316.1;Name=WP_060074316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402440.1;locus_tag=LDO49_RS23780;product=hotdog family protein;protein_id=WP_060074316.1;transl_table=11 NZ_CAJZAV010000247.1 RefSeq gene 13156 13881 . + . ID=gene-LDO49_RS23785;Name=LDO49_RS23785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23785;old_locus_tag=BCEP4_400014 NZ_CAJZAV010000247.1 Protein Homology CDS 13156 13881 . + 0 ID=cds-WP_060074318.1;Parent=gene-LDO49_RS23785;Dbxref=GenBank:WP_060074318.1;Name=WP_060074318.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658630.1;locus_tag=LDO49_RS23785;product=3-ketoacyl-ACP reductase FabG2;protein_id=WP_060074318.1;transl_table=11 NZ_CAJZAV010000247.1 RefSeq gene 13881 15110 . + . ID=gene-LDO49_RS23790;Name=LDO49_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23790;old_locus_tag=BCEP4_400015 NZ_CAJZAV010000247.1 Protein Homology CDS 13881 15110 . + 0 ID=cds-WP_060074320.1;Parent=gene-LDO49_RS23790;Dbxref=GenBank:WP_060074320.1;Name=WP_060074320.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760532.1;locus_tag=LDO49_RS23790;product=beta-ketoacyl-ACP synthase;protein_id=WP_060074320.1;transl_table=11 NZ_CAJZAV010000247.1 RefSeq gene 15107 16348 . + . ID=gene-LDO49_RS23795;Name=LDO49_RS23795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23795;old_locus_tag=BCEP4_400016 NZ_CAJZAV010000247.1 Protein Homology CDS 15107 16348 . + 0 ID=cds-WP_124476018.1;Parent=gene-LDO49_RS23795;Dbxref=GenBank:WP_124476018.1;Name=WP_124476018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415738.1;locus_tag=LDO49_RS23795;product=beta-ketoacyl synthase N-terminal-like domain-containing protein;protein_id=WP_124476018.1;transl_table=11 NZ_CAJZAV010000247.1 RefSeq gene 16381 16803 . + . ID=gene-LDO49_RS23800;Name=LDO49_RS23800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23800;old_locus_tag=BCEP4_400017 NZ_CAJZAV010000247.1 Protein Homology CDS 16381 16803 . + 0 ID=cds-WP_060074325.1;Parent=gene-LDO49_RS23800;Dbxref=GenBank:WP_060074325.1;Name=WP_060074325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403733.1;locus_tag=LDO49_RS23800;product=hypothetical protein;protein_id=WP_060074325.1;transl_table=11 NZ_CAJZAV010000247.1 RefSeq gene 16815 17249 . + . ID=gene-LDO49_RS23805;Name=LDO49_RS23805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23805;old_locus_tag=BCEP4_400018 NZ_CAJZAV010000247.1 Protein Homology CDS 16815 17249 . + 0 ID=cds-WP_060074335.1;Parent=gene-LDO49_RS23805;Dbxref=GenBank:WP_060074335.1;Name=WP_060074335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658634.1;locus_tag=LDO49_RS23805;product=hypothetical protein;protein_id=WP_060074335.1;transl_table=11 NZ_CAJZAV010000247.1 RefSeq gene 17298 18017 . - . ID=gene-LDO49_RS23810;Name=LDO49_RS23810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23810;old_locus_tag=BCEP4_400019 NZ_CAJZAV010000247.1 Protein Homology CDS 17298 18017 . - 0 ID=cds-WP_060074327.1;Parent=gene-LDO49_RS23810;Dbxref=GenBank:WP_060074327.1;Name=WP_060074327.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403731.1;locus_tag=LDO49_RS23810;product=class I SAM-dependent methyltransferase;protein_id=WP_060074327.1;transl_table=11 NZ_CAJZAV010000247.1 RefSeq gene 18126 19385 . + . ID=gene-LDO49_RS23815;Name=LDO49_RS23815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23815;old_locus_tag=BCEP4_400020 NZ_CAJZAV010000247.1 Protein Homology CDS 18126 19385 . + 0 ID=cds-WP_060074329.1;Parent=gene-LDO49_RS23815;Dbxref=GenBank:WP_060074329.1;Name=WP_060074329.1;Ontology_term=GO:0000166,GO:0016491,GO:0071949;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880103.1;locus_tag=LDO49_RS23815;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_060074329.1;transl_table=11 ##sequence-region NZ_CAJZAV010000248.1 1 69785 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000248.1 RefSeq region 1 69785 . + . ID=NZ_CAJZAV010000248.1:1..69785;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_41 NZ_CAJZAV010000248.1 RefSeq gene 68 310 . + . ID=gene-LDO49_RS37595;Name=LDO49_RS37595;end_range=310,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37595;old_locus_tag=BCEP4_410001;partial=true NZ_CAJZAV010000248.1 Protein Homology CDS 68 310 . + 0 ID=cds-WP_372585862.1;Parent=gene-LDO49_RS37595;Dbxref=GenBank:WP_372585862.1;Name=WP_372585862.1;Ontology_term=GO:0006355,GO:0003677;end_range=310,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004531377.1;locus_tag=LDO49_RS37595;partial=true;product=MerR family transcriptional regulator;protein_id=WP_372585862.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 321 1040 . + . ID=gene-LDO49_RS23820;Name=LDO49_RS23820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23820;old_locus_tag=BCEP4_410002;partial=true;start_range=.,321 NZ_CAJZAV010000248.1 Protein Homology CDS 321 1040 . + 0 ID=cds-WP_443798010.1;Parent=gene-LDO49_RS23820;Dbxref=GenBank:WP_443798010.1;Name=WP_443798010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497208.1;locus_tag=LDO49_RS23820;partial=true;product=MerR family transcriptional regulator;protein_id=WP_443798010.1;start_range=.,321;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 1098 1805 . - . ID=gene-LDO49_RS23825;Name=LDO49_RS23825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23825;old_locus_tag=BCEP4_410003 NZ_CAJZAV010000248.1 Protein Homology CDS 1098 1805 . - 0 ID=cds-WP_060074653.1;Parent=gene-LDO49_RS23825;Dbxref=GenBank:WP_060074653.1;Name=WP_060074653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492642.1;locus_tag=LDO49_RS23825;product=hypothetical protein;protein_id=WP_060074653.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 1780 2004 . - . ID=gene-LDO49_RS23830;Name=LDO49_RS23830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23830;old_locus_tag=BCEP4_410004 NZ_CAJZAV010000248.1 Protein Homology CDS 1780 2004 . - 0 ID=cds-WP_027787308.1;Parent=gene-LDO49_RS23830;Dbxref=GenBank:WP_027787308.1;Name=WP_027787308.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488139.1;locus_tag=LDO49_RS23830;product=helix-turn-helix domain-containing protein;protein_id=WP_027787308.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 2013 2573 . - . ID=gene-LDO49_RS23835;Name=LDO49_RS23835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23835;old_locus_tag=BCEP4_410005 NZ_CAJZAV010000248.1 Protein Homology CDS 2013 2573 . - 0 ID=cds-WP_048022805.1;Parent=gene-LDO49_RS23835;Dbxref=GenBank:WP_048022805.1;Name=WP_048022805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521368.1;locus_tag=LDO49_RS23835;product=DUF2975 domain-containing protein;protein_id=WP_048022805.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 2738 3268 . - . ID=gene-LDO49_RS23840;Name=LDO49_RS23840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23840;old_locus_tag=BCEP4_410006 NZ_CAJZAV010000248.1 Protein Homology CDS 2738 3268 . - 0 ID=cds-WP_224052410.1;Parent=gene-LDO49_RS23840;Dbxref=GenBank:WP_224052410.1;Name=WP_224052410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_069256755.1;locus_tag=LDO49_RS23840;product=M949_RS01915 family surface polysaccharide biosynthesis protein;protein_id=WP_224052410.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 3348 4745 . - . ID=gene-LDO49_RS23845;Name=LDO49_RS23845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23845;old_locus_tag=BCEP4_410007 NZ_CAJZAV010000248.1 Protein Homology CDS 3348 4745 . - 0 ID=cds-WP_060074652.1;Parent=gene-LDO49_RS23845;Dbxref=GenBank:WP_060074652.1;Name=WP_060074652.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399999.1;locus_tag=LDO49_RS23845;product=sigma-54 interaction domain-containing protein;protein_id=WP_060074652.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 5007 5891 . + . ID=gene-LDO49_RS23850;Name=LDO49_RS23850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23850;old_locus_tag=BCEP4_410008 NZ_CAJZAV010000248.1 Protein Homology CDS 5007 5891 . + 0 ID=cds-WP_060074651.1;Parent=gene-LDO49_RS23850;Dbxref=GenBank:WP_060074651.1;Name=WP_060074651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764264.1;locus_tag=LDO49_RS23850;product=MBL fold metallo-hydrolase;protein_id=WP_060074651.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 5921 7591 . + . ID=gene-LDO49_RS23855;Name=LDO49_RS23855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23855;old_locus_tag=BCEP4_410009 NZ_CAJZAV010000248.1 Protein Homology CDS 5921 7591 . + 0 ID=cds-WP_048022809.1;Parent=gene-LDO49_RS23855;Dbxref=GenBank:WP_048022809.1;Name=WP_048022809.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549742.1;locus_tag=LDO49_RS23855;product=bifunctional protein tyrosine phosphatase family protein/NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_048022809.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 7610 8416 . + . ID=gene-LDO49_RS23860;Name=LDO49_RS23860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23860;old_locus_tag=BCEP4_410010 NZ_CAJZAV010000248.1 Protein Homology CDS 7610 8416 . + 0 ID=cds-WP_059488400.1;Parent=gene-LDO49_RS23860;Dbxref=GenBank:WP_059488400.1;Name=WP_059488400.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006475949.1;locus_tag=LDO49_RS23860;product=sulfite exporter TauE/SafE family protein;protein_id=WP_059488400.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 8577 8987 . - . ID=gene-LDO49_RS23865;Name=LDO49_RS23865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23865;old_locus_tag=BCEP4_410011 NZ_CAJZAV010000248.1 GeneMarkS-2+ CDS 8577 8987 . - 0 ID=cds-WP_059670205.1;Parent=gene-LDO49_RS23865;Dbxref=GenBank:WP_059670205.1;Name=WP_059670205.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS23865;product=hypothetical protein;protein_id=WP_059670205.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 9075 9896 . - . ID=gene-LDO49_RS23870;Name=LDO49_RS23870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23870;old_locus_tag=BCEP4_410012 NZ_CAJZAV010000248.1 Protein Homology CDS 9075 9896 . - 0 ID=cds-WP_027787300.1;Parent=gene-LDO49_RS23870;Dbxref=GenBank:WP_027787300.1;Name=WP_027787300.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352198.1;locus_tag=LDO49_RS23870;product=ABC transporter permease subunit;protein_id=WP_027787300.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 9893 10819 . - . ID=gene-LDO49_RS23875;Name=LDO49_RS23875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23875;old_locus_tag=BCEP4_410013 NZ_CAJZAV010000248.1 Protein Homology CDS 9893 10819 . - 0 ID=cds-WP_027787299.1;Parent=gene-LDO49_RS23875;Dbxref=GenBank:WP_027787299.1;Name=WP_027787299.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006475947.1;locus_tag=LDO49_RS23875;product=ABC transporter permease subunit;protein_id=WP_027787299.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 10816 11976 . - . ID=gene-LDO49_RS23880;Name=LDO49_RS23880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23880;old_locus_tag=BCEP4_410014 NZ_CAJZAV010000248.1 Protein Homology CDS 10816 11976 . - 0 ID=cds-WP_048022911.1;Parent=gene-LDO49_RS23880;Dbxref=GenBank:WP_048022911.1;Name=WP_048022911.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115150.1;locus_tag=LDO49_RS23880;product=ABC transporter ATP-binding protein;protein_id=WP_048022911.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 12062 13156 . - . ID=gene-LDO49_RS23885;Name=LDO49_RS23885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23885;old_locus_tag=BCEP4_410015 NZ_CAJZAV010000248.1 Protein Homology CDS 12062 13156 . - 0 ID=cds-WP_027787297.1;Parent=gene-LDO49_RS23885;Dbxref=GenBank:WP_027787297.1;Name=WP_027787297.1;Ontology_term=GO:0015846,GO:0019808,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004266745.1;locus_tag=LDO49_RS23885;product=polyamine ABC transporter substrate-binding protein;protein_id=WP_027787297.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 13582 13785 . + . ID=gene-LDO49_RS23890;Name=LDO49_RS23890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23890;old_locus_tag=BCEP4_410016 NZ_CAJZAV010000248.1 Protein Homology CDS 13582 13785 . + 0 ID=cds-WP_021159754.1;Parent=gene-LDO49_RS23890;Dbxref=GenBank:WP_021159754.1;Name=WP_021159754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760068.1;locus_tag=LDO49_RS23890;product=DUF1289 domain-containing protein;protein_id=WP_021159754.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 13883 14524 . - . ID=gene-LDO49_RS23895;Name=LDO49_RS23895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23895;old_locus_tag=BCEP4_410017 NZ_CAJZAV010000248.1 Protein Homology CDS 13883 14524 . - 0 ID=cds-WP_021159755.1;Parent=gene-LDO49_RS23895;Dbxref=GenBank:WP_021159755.1;Name=WP_021159755.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328582.1;locus_tag=LDO49_RS23895;product=OmpW/AlkL family protein;protein_id=WP_021159755.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 14590 15780 . - . ID=gene-LDO49_RS23900;Name=LDO49_RS23900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23900;old_locus_tag=BCEP4_410018 NZ_CAJZAV010000248.1 Protein Homology CDS 14590 15780 . - 0 ID=cds-WP_021159756.1;Parent=gene-LDO49_RS23900;Dbxref=GenBank:WP_021159756.1;Name=WP_021159756.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328583.1;locus_tag=LDO49_RS23900;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_021159756.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 15902 17338 . - . ID=gene-LDO49_RS23905;Name=LDO49_RS23905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23905;old_locus_tag=BCEP4_410019 NZ_CAJZAV010000248.1 Protein Homology CDS 15902 17338 . - 0 ID=cds-WP_060074650.1;Parent=gene-LDO49_RS23905;Dbxref=GenBank:WP_060074650.1;Name=WP_060074650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488133.1;locus_tag=LDO49_RS23905;product=aldehyde dehydrogenase family protein;protein_id=WP_060074650.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 17463 18224 . + . ID=gene-LDO49_RS23910;Name=LDO49_RS23910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23910;old_locus_tag=BCEP4_410020 NZ_CAJZAV010000248.1 GeneMarkS-2+ CDS 17463 18224 . + 0 ID=cds-WP_059488392.1;Parent=gene-LDO49_RS23910;Dbxref=GenBank:WP_059488392.1;Name=WP_059488392.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS23910;product=hypothetical protein;protein_id=WP_059488392.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 18545 18910 . + . ID=gene-LDO49_RS23915;Name=LDO49_RS23915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23915;old_locus_tag=BCEP4_410021 NZ_CAJZAV010000248.1 Protein Homology CDS 18545 18910 . + 0 ID=cds-WP_027787292.1;Parent=gene-LDO49_RS23915;Dbxref=GenBank:WP_027787292.1;Name=WP_027787292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186799.1;locus_tag=LDO49_RS23915;product=hypothetical protein;protein_id=WP_027787292.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 19022 19501 . - . ID=gene-LDO49_RS23920;Name=LDO49_RS23920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23920;old_locus_tag=BCEP4_410022 NZ_CAJZAV010000248.1 Protein Homology CDS 19022 19501 . - 0 ID=cds-WP_021159760.1;Parent=gene-LDO49_RS23920;Dbxref=GenBank:WP_021159760.1;Name=WP_021159760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189053.1;locus_tag=LDO49_RS23920;product=DUF2501 domain-containing protein;protein_id=WP_021159760.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 19791 20336 . + . ID=gene-LDO49_RS23925;Name=LDO49_RS23925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23925;old_locus_tag=BCEP4_410023 NZ_CAJZAV010000248.1 Protein Homology CDS 19791 20336 . + 0 ID=cds-WP_372585863.1;Parent=gene-LDO49_RS23925;Dbxref=GenBank:WP_372585863.1;Name=WP_372585863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485230.1;locus_tag=LDO49_RS23925;product=hypothetical protein;protein_id=WP_372585863.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 20414 20989 . + . ID=gene-LDO49_RS23930;Name=LDO49_RS23930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23930;old_locus_tag=BCEP4_410024 NZ_CAJZAV010000248.1 Protein Homology CDS 20414 20989 . + 0 ID=cds-WP_224052411.1;Parent=gene-LDO49_RS23930;Dbxref=GenBank:WP_224052411.1;Name=WP_224052411.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017425138.1;locus_tag=LDO49_RS23930;product=polysaccharide deacetylase family protein;protein_id=WP_224052411.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 21008 21967 . - . ID=gene-LDO49_RS23935;Name=LDO49_RS23935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23935;old_locus_tag=BCEP4_410025 NZ_CAJZAV010000248.1 Protein Homology CDS 21008 21967 . - 0 ID=cds-WP_224052412.1;Parent=gene-LDO49_RS23935;Dbxref=GenBank:WP_224052412.1;Name=WP_224052412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549729.1;locus_tag=LDO49_RS23935;product=phosphotransferase;protein_id=WP_224052412.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 21993 22682 . + . ID=gene-LDO49_RS23940;Name=LDO49_RS23940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23940;old_locus_tag=BCEP4_410026 NZ_CAJZAV010000248.1 Protein Homology CDS 21993 22682 . + 0 ID=cds-WP_224052413.1;Parent=gene-LDO49_RS23940;Dbxref=GenBank:WP_224052413.1;Name=WP_224052413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352212.1;locus_tag=LDO49_RS23940;product=cephalosporin hydroxylase family protein;protein_id=WP_224052413.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 22639 23844 . - . ID=gene-LDO49_RS23945;Name=LDO49_RS23945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23945;old_locus_tag=BCEP4_410027 NZ_CAJZAV010000248.1 Protein Homology CDS 22639 23844 . - 0 ID=cds-WP_224052414.1;Parent=gene-LDO49_RS23945;Dbxref=GenBank:WP_224052414.1;Name=WP_224052414.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484271.1;locus_tag=LDO49_RS23945;product=glycosyltransferase;protein_id=WP_224052414.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 23852 24925 . - . ID=gene-LDO49_RS23950;Name=LDO49_RS23950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23950;old_locus_tag=BCEP4_410028 NZ_CAJZAV010000248.1 Protein Homology CDS 23852 24925 . - 0 ID=cds-WP_224052415.1;Parent=gene-LDO49_RS23950;Dbxref=GenBank:WP_224052415.1;Name=WP_224052415.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328591.1;locus_tag=LDO49_RS23950;product=asparagine synthase-related protein;protein_id=WP_224052415.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 24922 25770 . - . ID=gene-LDO49_RS23955;Name=LDO49_RS23955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23955;old_locus_tag=BCEP4_410029 NZ_CAJZAV010000248.1 Protein Homology CDS 24922 25770 . - 0 ID=cds-WP_372585864.1;Parent=gene-LDO49_RS23955;Dbxref=GenBank:WP_372585864.1;Name=WP_372585864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352215.1;locus_tag=LDO49_RS23955;product=radical SAM protein;protein_id=WP_372585864.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 25793 26785 . - . ID=gene-LDO49_RS23960;Name=LDO49_RS23960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23960;old_locus_tag=BCEP4_410030 NZ_CAJZAV010000248.1 Protein Homology CDS 25793 26785 . - 0 ID=cds-WP_069253567.1;Parent=gene-LDO49_RS23960;Dbxref=GenBank:WP_069253567.1;Name=WP_069253567.1;Ontology_term=GO:0016310,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352216.1;locus_tag=LDO49_RS23960;product=phosphotransferase enzyme family protein;protein_id=WP_069253567.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 26786 27535 . - . ID=gene-LDO49_RS23965;Name=LDO49_RS23965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23965;old_locus_tag=BCEP4_410031 NZ_CAJZAV010000248.1 Protein Homology CDS 26786 27535 . - 0 ID=cds-WP_224052417.1;Parent=gene-LDO49_RS23965;Dbxref=GenBank:WP_224052417.1;Name=WP_224052417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549723.1;locus_tag=LDO49_RS23965;product=FkbM family methyltransferase;protein_id=WP_224052417.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq pseudogene 27792 27917 . - . ID=gene-LDO49_RS37340;Name=LDO49_RS37340;end_range=27917,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37340;old_locus_tag=BCEP4_410033;partial=true;pseudo=true NZ_CAJZAV010000248.1 Protein Homology CDS 27792 27917 . - 0 ID=cds-LDO49_RS37340;Parent=gene-LDO49_RS37340;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=27917,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485248.1;locus_tag=LDO49_RS37340;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 27961 28929 . + . ID=gene-LDO49_RS23970;Name=LDO49_RS23970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23970;old_locus_tag=BCEP4_410034 NZ_CAJZAV010000248.1 Protein Homology CDS 27961 28929 . + 0 ID=cds-WP_224052418.1;Parent=gene-LDO49_RS23970;Dbxref=GenBank:WP_224052418.1;Name=WP_224052418.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006161913.1;locus_tag=LDO49_RS23970;product=site-specific integrase;protein_id=WP_224052418.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 29021 29500 . - . ID=gene-LDO49_RS23975;Name=LDO49_RS23975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23975;old_locus_tag=BCEP4_410035 NZ_CAJZAV010000248.1 GeneMarkS-2+ CDS 29021 29500 . - 0 ID=cds-WP_224052419.1;Parent=gene-LDO49_RS23975;Dbxref=GenBank:WP_224052419.1;Name=WP_224052419.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS23975;product=hypothetical protein;protein_id=WP_224052419.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 29902 31197 . + . ID=gene-LDO49_RS23980;Name=LDO49_RS23980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23980;old_locus_tag=BCEP4_410036 NZ_CAJZAV010000248.1 Protein Homology CDS 29902 31197 . + 0 ID=cds-WP_224052420.1;Parent=gene-LDO49_RS23980;Dbxref=GenBank:WP_224052420.1;Name=WP_224052420.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.6;locus_tag=LDO49_RS23980;product=tyrosine-type recombinase/integrase;protein_id=WP_224052420.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 31194 31481 . + . ID=gene-LDO49_RS37345;Name=LDO49_RS37345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37345;old_locus_tag=BCEP4_410038 NZ_CAJZAV010000248.1 Protein Homology CDS 31194 31481 . + 0 ID=cds-WP_290369877.1;Parent=gene-LDO49_RS37345;Dbxref=GenBank:WP_290369877.1;Name=WP_290369877.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.6;locus_tag=LDO49_RS37345;product=tyrosine-type recombinase/integrase;protein_id=WP_290369877.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 31453 32421 . - . ID=gene-LDO49_RS23990;Name=LDO49_RS23990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23990;old_locus_tag=BCEP4_410039 NZ_CAJZAV010000248.1 Protein Homology CDS 31453 32421 . - 0 ID=cds-WP_224052421.1;Parent=gene-LDO49_RS23990;Dbxref=GenBank:WP_224052421.1;Name=WP_224052421.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025027.6;locus_tag=LDO49_RS23990;product=DUF4145 domain-containing protein;protein_id=WP_224052421.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 32660 33838 . - . ID=gene-LDO49_RS23995;Name=LDO49_RS23995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS23995;old_locus_tag=BCEP4_410042 NZ_CAJZAV010000248.1 GeneMarkS-2+ CDS 32660 33838 . - 0 ID=cds-WP_224052422.1;Parent=gene-LDO49_RS23995;Dbxref=GenBank:WP_224052422.1;Name=WP_224052422.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS23995;product=hypothetical protein;protein_id=WP_224052422.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 34044 34592 . - . ID=gene-LDO49_RS24000;Name=LDO49_RS24000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24000;old_locus_tag=BCEP4_410043 NZ_CAJZAV010000248.1 GeneMarkS-2+ CDS 34044 34592 . - 0 ID=cds-WP_224052423.1;Parent=gene-LDO49_RS24000;Dbxref=GenBank:WP_224052423.1;Name=WP_224052423.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS24000;product=hypothetical protein;protein_id=WP_224052423.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 34589 35149 . - . ID=gene-LDO49_RS24005;Name=LDO49_RS24005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24005;old_locus_tag=BCEP4_410044 NZ_CAJZAV010000248.1 GeneMarkS-2+ CDS 34589 35149 . - 0 ID=cds-WP_224052424.1;Parent=gene-LDO49_RS24005;Dbxref=GenBank:WP_224052424.1;Name=WP_224052424.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS24005;product=hypothetical protein;protein_id=WP_224052424.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 35394 39242 . - . ID=gene-LDO49_RS24010;Name=LDO49_RS24010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24010;old_locus_tag=BCEP4_410045 NZ_CAJZAV010000248.1 GeneMarkS-2+ CDS 35394 39242 . - 0 ID=cds-WP_224052425.1;Parent=gene-LDO49_RS24010;Dbxref=GenBank:WP_224052425.1;Name=WP_224052425.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS24010;product=hypothetical protein;protein_id=WP_224052425.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 39592 39807 . - . ID=gene-LDO49_RS24015;Name=LDO49_RS24015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24015 NZ_CAJZAV010000248.1 GeneMarkS-2+ CDS 39592 39807 . - 0 ID=cds-WP_224052426.1;Parent=gene-LDO49_RS24015;Dbxref=GenBank:WP_224052426.1;Name=WP_224052426.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS24015;product=hypothetical protein;protein_id=WP_224052426.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 39875 40102 . - . ID=gene-LDO49_RS24020;Name=LDO49_RS24020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24020;old_locus_tag=BCEP4_410047 NZ_CAJZAV010000248.1 Protein Homology CDS 39875 40102 . - 0 ID=cds-WP_224052427.1;Parent=gene-LDO49_RS24020;Dbxref=GenBank:WP_224052427.1;Name=WP_224052427.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006164681.1;locus_tag=LDO49_RS24020;product=helix-turn-helix domain-containing protein;protein_id=WP_224052427.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 40396 40950 . + . ID=gene-LDO49_RS24025;Name=LDO49_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24025;old_locus_tag=BCEP4_410048 NZ_CAJZAV010000248.1 Protein Homology CDS 40396 40950 . + 0 ID=cds-WP_224052438.1;Parent=gene-LDO49_RS24025;Dbxref=GenBank:WP_224052438.1;Name=WP_224052438.1;Ontology_term=GO:0003677,GO:0004519,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:NF013964.6;locus_tag=LDO49_RS24025;product=HNH endonuclease;protein_id=WP_224052438.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 40947 41540 . - . ID=gene-LDO49_RS24030;Name=LDO49_RS24030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24030;old_locus_tag=BCEP4_410049 NZ_CAJZAV010000248.1 Protein Homology CDS 40947 41540 . - 0 ID=cds-WP_224052428.1;Parent=gene-LDO49_RS24030;Dbxref=GenBank:WP_224052428.1;Name=WP_224052428.1;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011803290.1;locus_tag=LDO49_RS24030;product=recombinase family protein;protein_id=WP_224052428.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 41964 42452 . + . ID=gene-LDO49_RS24035;Name=LDO49_RS24035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24035;old_locus_tag=BCEP4_410052 NZ_CAJZAV010000248.1 Protein Homology CDS 41964 42452 . + 0 ID=cds-WP_224052429.1;Parent=gene-LDO49_RS24035;Dbxref=GenBank:WP_224052429.1;Name=WP_224052429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011483657.1;locus_tag=LDO49_RS24035;product=DUF4145 domain-containing protein;protein_id=WP_224052429.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 42948 44219 . + . ID=gene-LDO49_RS24040;Name=drt2;gbkey=Gene;gene=drt2;gene_biotype=protein_coding;locus_tag=LDO49_RS24040;old_locus_tag=BCEP4_410054 NZ_CAJZAV010000248.1 Protein Homology CDS 42948 44219 . + 0 ID=cds-WP_224052430.1;Parent=gene-LDO49_RS24040;Dbxref=GenBank:WP_224052430.1;Name=WP_224052430.1;Ontology_term=GO:0051607;gbkey=CDS;gene=drt2;go_process=defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006159638.1;locus_tag=LDO49_RS24040;product=antiviral reverse transcriptase Drt2;protein_id=WP_224052430.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 44416 46008 . - . ID=gene-LDO49_RS24045;Name=LDO49_RS24045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24045;old_locus_tag=BCEP4_410058 NZ_CAJZAV010000248.1 Protein Homology CDS 44416 46008 . - 0 ID=cds-WP_027787281.1;Parent=gene-LDO49_RS24045;Dbxref=GenBank:WP_027787281.1;Name=WP_027787281.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485248.1;locus_tag=LDO49_RS24045;product=ABC-F family ATPase;protein_id=WP_027787281.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 46180 46632 . + . ID=gene-LDO49_RS24050;Name=LDO49_RS24050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24050;old_locus_tag=BCEP4_410057 NZ_CAJZAV010000248.1 Protein Homology CDS 46180 46632 . + 0 ID=cds-WP_021159771.1;Parent=gene-LDO49_RS24050;Dbxref=GenBank:WP_021159771.1;Name=WP_021159771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363963.1;locus_tag=LDO49_RS24050;product=lipocalin-like domain-containing protein;protein_id=WP_021159771.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 46732 49029 . - . ID=gene-LDO49_RS24055;Name=LDO49_RS24055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24055;old_locus_tag=BCEP4_410059 NZ_CAJZAV010000248.1 Protein Homology CDS 46732 49029 . - 0 ID=cds-WP_224052431.1;Parent=gene-LDO49_RS24055;Dbxref=GenBank:WP_224052431.1;Name=WP_224052431.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549720.1;locus_tag=LDO49_RS24055;product=AsmA family protein;protein_id=WP_224052431.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 49182 49883 . + . ID=gene-LDO49_RS24060;Name=LDO49_RS24060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24060;old_locus_tag=BCEP4_410060 NZ_CAJZAV010000248.1 Protein Homology CDS 49182 49883 . + 0 ID=cds-WP_224052432.1;Parent=gene-LDO49_RS24060;Dbxref=GenBank:WP_224052432.1;Name=WP_224052432.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328605.1;locus_tag=LDO49_RS24060;product=ABC transporter ATP-binding protein;protein_id=WP_224052432.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 49880 50683 . + . ID=gene-LDO49_RS24065;Name=LDO49_RS24065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24065;old_locus_tag=BCEP4_410061 NZ_CAJZAV010000248.1 Protein Homology CDS 49880 50683 . + 0 ID=cds-WP_021159773.1;Parent=gene-LDO49_RS24065;Dbxref=GenBank:WP_021159773.1;Name=WP_021159773.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485250.1;locus_tag=LDO49_RS24065;product=ABC transporter permease;protein_id=WP_021159773.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 50725 51198 . - . ID=gene-LDO49_RS24070;Name=LDO49_RS24070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24070;old_locus_tag=BCEP4_410062 NZ_CAJZAV010000248.1 Protein Homology CDS 50725 51198 . - 0 ID=cds-WP_059488368.1;Parent=gene-LDO49_RS24070;Dbxref=GenBank:WP_059488368.1;Name=WP_059488368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896941.1;locus_tag=LDO49_RS24070;product=PliI family lysozyme inhibitor of I-type lysozyme;protein_id=WP_059488368.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 51449 52000 . - . ID=gene-LDO49_RS24075;Name=LDO49_RS24075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24075;old_locus_tag=BCEP4_410063 NZ_CAJZAV010000248.1 Protein Homology CDS 51449 52000 . - 0 ID=cds-WP_042975218.1;Parent=gene-LDO49_RS24075;Dbxref=GenBank:WP_042975218.1;Name=WP_042975218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213276.1;locus_tag=LDO49_RS24075;product=DUF6013 family protein;protein_id=WP_042975218.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 52160 53176 . - . ID=gene-LDO49_RS24080;Name=LDO49_RS24080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24080;old_locus_tag=BCEP4_410064 NZ_CAJZAV010000248.1 Protein Homology CDS 52160 53176 . - 0 ID=cds-WP_021159777.1;Parent=gene-LDO49_RS24080;Dbxref=GenBank:WP_021159777.1;Name=WP_021159777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497183.1;locus_tag=LDO49_RS24080;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_021159777.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 53299 54240 . + . ID=gene-LDO49_RS24085;Name=LDO49_RS24085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24085;old_locus_tag=BCEP4_410065 NZ_CAJZAV010000248.1 Protein Homology CDS 53299 54240 . + 0 ID=cds-WP_224052433.1;Parent=gene-LDO49_RS24085;Dbxref=GenBank:WP_224052433.1;Name=WP_224052433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754358.1;locus_tag=LDO49_RS24085;product=LysR family transcriptional regulator;protein_id=WP_224052433.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 54442 55287 . + . ID=gene-LDO49_RS24090;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=LDO49_RS24090;old_locus_tag=BCEP4_410066 NZ_CAJZAV010000248.1 Protein Homology CDS 54442 55287 . + 0 ID=cds-WP_224052434.1;Parent=gene-LDO49_RS24090;Dbxref=GenBank:WP_224052434.1;Name=WP_224052434.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006475922.1;locus_tag=LDO49_RS24090;product=phosphoserine phosphatase SerB;protein_id=WP_224052434.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 55375 56556 . - . ID=gene-LDO49_RS24095;Name=LDO49_RS24095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24095;old_locus_tag=BCEP4_410068 NZ_CAJZAV010000248.1 Protein Homology CDS 55375 56556 . - 0 ID=cds-WP_224052435.1;Parent=gene-LDO49_RS24095;Dbxref=GenBank:WP_224052435.1;Name=WP_224052435.1;Ontology_term=GO:0019346,GO:0047804;gbkey=CDS;go_function=cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851723.1;locus_tag=LDO49_RS24095;product=cystathionine beta-lyase;protein_id=WP_224052435.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 56670 57212 . - . ID=gene-LDO49_RS24100;Name=LDO49_RS24100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24100;old_locus_tag=BCEP4_410070 NZ_CAJZAV010000248.1 Protein Homology CDS 56670 57212 . - 0 ID=cds-WP_224052436.1;Parent=gene-LDO49_RS24100;Dbxref=GenBank:WP_224052436.1;Name=WP_224052436.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754355.1;locus_tag=LDO49_RS24100;product=hypothetical protein;protein_id=WP_224052436.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 57303 58229 . - . ID=gene-LDO49_RS24105;Name=LDO49_RS24105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24105;old_locus_tag=BCEP4_410071 NZ_CAJZAV010000248.1 Protein Homology CDS 57303 58229 . - 0 ID=cds-WP_059675870.1;Parent=gene-LDO49_RS24105;Dbxref=GenBank:WP_059675870.1;Name=WP_059675870.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485268.1;locus_tag=LDO49_RS24105;product=sugar kinase;protein_id=WP_059675870.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 58233 59594 . - . ID=gene-LDO49_RS24110;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=LDO49_RS24110;old_locus_tag=BCEP4_410072 NZ_CAJZAV010000248.1 Protein Homology CDS 58233 59594 . - 0 ID=cds-WP_021159783.1;Parent=gene-LDO49_RS24110;Dbxref=GenBank:WP_021159783.1;Name=WP_021159783.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896933.1;locus_tag=LDO49_RS24110;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_021159783.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq pseudogene 59610 60122 . + . ID=gene-LDO49_RS24115;Name=LDO49_RS24115;end_range=60122,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS24115;old_locus_tag=BCEP4_410069;partial=true;pseudo=true NZ_CAJZAV010000248.1 Protein Homology CDS 59610 60122 . + 0 ID=cds-LDO49_RS24115;Parent=gene-LDO49_RS24115;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0000150,GO:0003677;end_range=60122,.;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216731.1;locus_tag=LDO49_RS24115;partial=true;product=recombinase family protein;pseudo=true;transl_table=11 NZ_CAJZAV010000248.1 RefSeq pseudogene 60110 60580 . + . ID=gene-LDO49_RS24120;Name=LDO49_RS24120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS24120;partial=true;pseudo=true;start_range=.,60110 NZ_CAJZAV010000248.1 Protein Homology CDS 60110 60580 . + 0 ID=cds-LDO49_RS24120;Parent=gene-LDO49_RS24120;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029868.1;locus_tag=LDO49_RS24120;partial=true;product=transposase;pseudo=true;start_range=.,60110;transl_table=11 NZ_CAJZAV010000248.1 RefSeq pseudogene 60642 60980 . + . ID=gene-LDO49_RS24125;Name=LDO49_RS24125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS24125;partial=true;pseudo=true;start_range=.,60642 NZ_CAJZAV010000248.1 Protein Homology CDS 60642 60980 . + 0 ID=cds-LDO49_RS24125;Parent=gene-LDO49_RS24125;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611304.1;locus_tag=LDO49_RS24125;partial=true;product=integrase core domain-containing protein;pseudo=true;start_range=.,60642;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 61072 61662 . + . ID=gene-LDO49_RS24130;Name=LDO49_RS24130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24130;old_locus_tag=BCEP4_410075 NZ_CAJZAV010000248.1 GeneMarkS-2+ CDS 61072 61662 . + 0 ID=cds-WP_221623646.1;Parent=gene-LDO49_RS24130;Dbxref=GenBank:WP_221623646.1;Name=WP_221623646.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS24130;product=transposase;protein_id=WP_221623646.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 61685 62671 . - . ID=gene-LDO49_RS24135;Name=LDO49_RS24135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24135;old_locus_tag=BCEP4_410076 NZ_CAJZAV010000248.1 GeneMarkS-2+ CDS 61685 62671 . - 0 ID=cds-WP_124476026.1;Parent=gene-LDO49_RS24135;Dbxref=GenBank:WP_124476026.1;Name=WP_124476026.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS24135;product=hypothetical protein;protein_id=WP_124476026.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 62668 63648 . - . ID=gene-LDO49_RS24140;Name=LDO49_RS24140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24140;old_locus_tag=BCEP4_410077 NZ_CAJZAV010000248.1 GeneMarkS-2+ CDS 62668 63648 . - 0 ID=cds-WP_124476025.1;Parent=gene-LDO49_RS24140;Dbxref=GenBank:WP_124476025.1;Name=WP_124476025.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS24140;product=hypothetical protein;protein_id=WP_124476025.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 63655 63942 . - . ID=gene-LDO49_RS37600;Name=LDO49_RS37600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37600 NZ_CAJZAV010000248.1 GeneMarkS-2+ CDS 63655 63942 . - 0 ID=cds-WP_124476024.1;Parent=gene-LDO49_RS37600;Dbxref=GenBank:WP_124476024.1;Name=WP_124476024.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37600;product=hypothetical protein;protein_id=WP_124476024.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 64132 64821 . + . ID=gene-LDO49_RS37605;Name=LDO49_RS37605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37605 NZ_CAJZAV010000248.1 Protein Homology CDS 64132 64821 . + 0 ID=cds-WP_124476027.1;Parent=gene-LDO49_RS37605;Dbxref=GenBank:WP_124476027.1;Name=WP_124476027.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013921.6;locus_tag=LDO49_RS37605;product=transposase;protein_id=WP_124476027.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 64865 65851 . - . ID=gene-LDO49_RS24155;Name=LDO49_RS24155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24155;old_locus_tag=BCEP4_410080 NZ_CAJZAV010000248.1 GeneMarkS-2+ CDS 64865 65851 . - 0 ID=cds-WP_124844545.1;Parent=gene-LDO49_RS24155;Dbxref=GenBank:WP_124844545.1;Name=WP_124844545.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS24155;product=hypothetical protein;protein_id=WP_124844545.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 65848 68637 . - . ID=gene-LDO49_RS24160;Name=LDO49_RS24160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24160;old_locus_tag=BCEP4_410081 NZ_CAJZAV010000248.1 Protein Homology CDS 65848 68637 . - 0 ID=cds-WP_224052437.1;Parent=gene-LDO49_RS24160;Dbxref=GenBank:WP_224052437.1;Name=WP_224052437.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042700.4;locus_tag=LDO49_RS24160;product=toxin VasX;protein_id=WP_224052437.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq gene 68634 69512 . - . ID=gene-LDO49_RS24165;Name=LDO49_RS24165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24165;old_locus_tag=BCEP4_410082 NZ_CAJZAV010000248.1 Protein Homology CDS 68634 69512 . - 0 ID=cds-WP_185633987.1;Parent=gene-LDO49_RS24165;Dbxref=GenBank:WP_185633987.1;Name=WP_185633987.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024894.6;locus_tag=LDO49_RS24165;product=DUF4123 domain-containing protein;protein_id=WP_185633987.1;transl_table=11 NZ_CAJZAV010000248.1 RefSeq pseudogene 69509 69785 . - . ID=gene-LDO49_RS24170;Name=LDO49_RS24170;end_range=69785,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS24170;old_locus_tag=BCEP4_410083;partial=true;pseudo=true NZ_CAJZAV010000248.1 GeneMarkS-2+ CDS 69509 69785 . - 1 ID=cds-LDO49_RS24170;Parent=gene-LDO49_RS24170;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=69785,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS24170;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000249.1 1 11873 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000249.1 RefSeq region 1 11873 . + . ID=NZ_CAJZAV010000249.1:1..11873;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_42 NZ_CAJZAV010000249.1 RefSeq gene 1 1734 . - . ID=gene-LDO49_RS24175;Name=LDO49_RS24175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24175;partial=true;start_range=.,1 NZ_CAJZAV010000249.1 Protein Homology CDS 1 1734 . - 0 ID=cds-WP_224052439.1;Parent=gene-LDO49_RS24175;Dbxref=GenBank:WP_224052439.1;Name=WP_224052439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214274.1;locus_tag=LDO49_RS24175;partial=true;product=EAL domain-containing protein;protein_id=WP_224052439.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000249.1 RefSeq gene 2075 3106 . - . ID=gene-LDO49_RS24180;Name=LDO49_RS24180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24180;old_locus_tag=BCEP4_420002 NZ_CAJZAV010000249.1 Protein Homology CDS 2075 3106 . - 0 ID=cds-WP_060070195.1;Parent=gene-LDO49_RS24180;Dbxref=GenBank:WP_060070195.1;Name=WP_060070195.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004545944.1;locus_tag=LDO49_RS24180;product=bile acid:sodium symporter family protein;protein_id=WP_060070195.1;transl_table=11 NZ_CAJZAV010000249.1 RefSeq gene 3453 3935 . + . ID=gene-LDO49_RS24185;Name=LDO49_RS24185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24185;old_locus_tag=BCEP4_420005 NZ_CAJZAV010000249.1 Protein Homology CDS 3453 3935 . + 0 ID=cds-WP_042973406.1;Parent=gene-LDO49_RS24185;Dbxref=GenBank:WP_042973406.1;Name=WP_042973406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353418.1;locus_tag=LDO49_RS24185;product=hypothetical protein;protein_id=WP_042973406.1;transl_table=11 NZ_CAJZAV010000249.1 RefSeq gene 4281 5357 . + . ID=gene-LDO49_RS24190;Name=LDO49_RS24190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24190;old_locus_tag=BCEP4_420007 NZ_CAJZAV010000249.1 Protein Homology CDS 4281 5357 . + 0 ID=cds-WP_021157443.1;Parent=gene-LDO49_RS24190;Dbxref=GenBank:WP_021157443.1;Name=WP_021157443.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407148.1;locus_tag=LDO49_RS24190;product=porin;protein_id=WP_021157443.1;transl_table=11 NZ_CAJZAV010000249.1 RefSeq gene 5538 6500 . + . ID=gene-LDO49_RS24195;Name=LDO49_RS24195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24195;old_locus_tag=BCEP4_420008 NZ_CAJZAV010000249.1 Protein Homology CDS 5538 6500 . + 0 ID=cds-WP_021157442.1;Parent=gene-LDO49_RS24195;Dbxref=GenBank:WP_021157442.1;Name=WP_021157442.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353416.1;locus_tag=LDO49_RS24195;product=LysR family transcriptional regulator;protein_id=WP_021157442.1;transl_table=11 NZ_CAJZAV010000249.1 RefSeq gene 6621 7580 . - . ID=gene-LDO49_RS24200;Name=LDO49_RS24200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24200;old_locus_tag=BCEP4_420010 NZ_CAJZAV010000249.1 Protein Homology CDS 6621 7580 . - 0 ID=cds-WP_059521161.1;Parent=gene-LDO49_RS24200;Dbxref=GenBank:WP_059521161.1;Name=WP_059521161.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488640.1;locus_tag=LDO49_RS24200;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_059521161.1;transl_table=11 NZ_CAJZAV010000249.1 RefSeq gene 7875 8771 . + . ID=gene-LDO49_RS24205;Name=LDO49_RS24205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24205;old_locus_tag=BCEP4_420011 NZ_CAJZAV010000249.1 Protein Homology CDS 7875 8771 . + 0 ID=cds-WP_021157441.1;Parent=gene-LDO49_RS24205;Dbxref=GenBank:WP_021157441.1;Name=WP_021157441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488641.1;locus_tag=LDO49_RS24205;product=alpha/beta fold hydrolase;protein_id=WP_021157441.1;transl_table=11 NZ_CAJZAV010000249.1 RefSeq gene 8799 9290 . - . ID=gene-LDO49_RS24210;Name=LDO49_RS24210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24210;old_locus_tag=BCEP4_420012 NZ_CAJZAV010000249.1 Protein Homology CDS 8799 9290 . - 0 ID=cds-WP_060070205.1;Parent=gene-LDO49_RS24210;Dbxref=GenBank:WP_060070205.1;Name=WP_060070205.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495467.1;locus_tag=LDO49_RS24210;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_060070205.1;transl_table=11 NZ_CAJZAV010000249.1 RefSeq gene 9404 10306 . + . ID=gene-LDO49_RS24215;Name=LDO49_RS24215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24215;old_locus_tag=BCEP4_420013 NZ_CAJZAV010000249.1 Protein Homology CDS 9404 10306 . + 0 ID=cds-WP_027788967.1;Parent=gene-LDO49_RS24215;Dbxref=GenBank:WP_027788967.1;Name=WP_027788967.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546366.1;locus_tag=LDO49_RS24215;product=DMT family transporter;protein_id=WP_027788967.1;transl_table=11 NZ_CAJZAV010000249.1 RefSeq gene 10571 10777 . - . ID=gene-LDO49_RS24220;Name=LDO49_RS24220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24220 NZ_CAJZAV010000249.1 Protein Homology CDS 10571 10777 . - 0 ID=cds-WP_021157438.1;Parent=gene-LDO49_RS24220;Dbxref=GenBank:WP_021157438.1;Name=WP_021157438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895855.1;locus_tag=LDO49_RS24220;product=DUF1289 domain-containing protein;protein_id=WP_021157438.1;transl_table=11 NZ_CAJZAV010000249.1 RefSeq gene 10774 11280 . - . ID=gene-LDO49_RS24225;Name=LDO49_RS24225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24225;old_locus_tag=BCEP4_420014 NZ_CAJZAV010000249.1 Protein Homology CDS 10774 11280 . - 0 ID=cds-WP_027788969.1;Parent=gene-LDO49_RS24225;Dbxref=GenBank:WP_027788969.1;Name=WP_027788969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525946.1;locus_tag=LDO49_RS24225;product=YbaK/EbsC family protein;protein_id=WP_027788969.1;transl_table=11 NZ_CAJZAV010000249.1 RefSeq gene 11307 11873 . - . ID=gene-LDO49_RS24230;Name=LDO49_RS24230;end_range=11873,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24230;old_locus_tag=BCEP4_420015;partial=true NZ_CAJZAV010000249.1 Protein Homology CDS 11307 11873 . - 0 ID=cds-WP_224052440.1;Parent=gene-LDO49_RS24230;Dbxref=GenBank:WP_224052440.1;Name=WP_224052440.1;Ontology_term=GO:0004419;end_range=11873,.;gbkey=CDS;go_function=hydroxymethylglutaryl-CoA lyase activity|0004419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329350.1;locus_tag=LDO49_RS24230;partial=true;product=hydroxymethylglutaryl-CoA lyase;protein_id=WP_224052440.1;transl_table=11 ##sequence-region NZ_CAJZAV010000250.1 1 20975 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000250.1 RefSeq region 1 20975 . + . ID=NZ_CAJZAV010000250.1:1..20975;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_43 NZ_CAJZAV010000250.1 RefSeq gene 1 761 . - . ID=gene-LDO49_RS24235;Name=LDO49_RS24235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24235;partial=true;start_range=.,1 NZ_CAJZAV010000250.1 Protein Homology CDS 1 761 . - 0 ID=cds-WP_224052441.1;Parent=gene-LDO49_RS24235;Dbxref=GenBank:WP_224052441.1;Name=WP_224052441.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352041.1;locus_tag=LDO49_RS24235;partial=true;product=TolC family protein;protein_id=WP_224052441.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000250.1 RefSeq gene 916 1752 . + . ID=gene-LDO49_RS24240;Name=LDO49_RS24240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24240;old_locus_tag=BCEP4_430002 NZ_CAJZAV010000250.1 Protein Homology CDS 916 1752 . + 0 ID=cds-WP_124843541.1;Parent=gene-LDO49_RS24240;Dbxref=GenBank:WP_124843541.1;Name=WP_124843541.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759502.1;locus_tag=LDO49_RS24240;product=AraC family transcriptional regulator;protein_id=WP_124843541.1;transl_table=11 NZ_CAJZAV010000250.1 RefSeq gene 1867 3234 . + . ID=gene-LDO49_RS24245;Name=LDO49_RS24245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24245;old_locus_tag=BCEP4_430003 NZ_CAJZAV010000250.1 Protein Homology CDS 1867 3234 . + 0 ID=cds-WP_124843543.1;Parent=gene-LDO49_RS24245;Dbxref=GenBank:WP_124843543.1;Name=WP_124843543.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: protein motif:HMM:TIGR01436.1;locus_tag=LDO49_RS24245;product=glutamate--cysteine ligase;protein_id=WP_124843543.1;transl_table=11 NZ_CAJZAV010000250.1 RefSeq gene 3254 4366 . - . ID=gene-LDO49_RS24250;Name=LDO49_RS24250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24250;old_locus_tag=BCEP4_430004 NZ_CAJZAV010000250.1 Protein Homology CDS 3254 4366 . - 0 ID=cds-WP_063800524.1;Parent=gene-LDO49_RS24250;Dbxref=GenBank:WP_063800524.1;Name=WP_063800524.1;Ontology_term=GO:0009073,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009955564.1;locus_tag=LDO49_RS24250;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_063800524.1;transl_table=11 NZ_CAJZAV010000250.1 RefSeq gene 4748 5158 . + . ID=gene-LDO49_RS24255;Name=LDO49_RS24255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24255;old_locus_tag=BCEP4_430005 NZ_CAJZAV010000250.1 Protein Homology CDS 4748 5158 . + 0 ID=cds-WP_021159585.1;Parent=gene-LDO49_RS24255;Dbxref=GenBank:WP_021159585.1;Name=WP_021159585.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010096477.1;locus_tag=LDO49_RS24255;product=acyl-CoA thioesterase;protein_id=WP_021159585.1;transl_table=11 NZ_CAJZAV010000250.1 RefSeq gene 5187 5834 . + . ID=gene-LDO49_RS24260;Name=LDO49_RS24260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24260;old_locus_tag=BCEP4_430006 NZ_CAJZAV010000250.1 GeneMarkS-2+ CDS 5187 5834 . + 0 ID=cds-WP_060217082.1;Parent=gene-LDO49_RS24260;Dbxref=GenBank:WP_060217082.1;Name=WP_060217082.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS24260;product=hypothetical protein;protein_id=WP_060217082.1;transl_table=11 NZ_CAJZAV010000250.1 RefSeq gene 5831 6394 . + . ID=gene-LDO49_RS24265;Name=LDO49_RS24265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24265;old_locus_tag=BCEP4_430007 NZ_CAJZAV010000250.1 Protein Homology CDS 5831 6394 . + 0 ID=cds-WP_060306612.1;Parent=gene-LDO49_RS24265;Dbxref=GenBank:WP_060306612.1;Name=WP_060306612.1;Ontology_term=GO:0008652,GO:0009073,GO:0000287,GO:0004765,GO:0005524;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,shikimate kinase activity|0004765||IEA,ATP binding|0005524||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019937348.1;locus_tag=LDO49_RS24265;product=shikimate kinase;protein_id=WP_060306612.1;transl_table=11 NZ_CAJZAV010000250.1 RefSeq gene 6974 7681 . + . ID=gene-LDO49_RS24270;Name=LDO49_RS24270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24270;old_locus_tag=BCEP4_430008 NZ_CAJZAV010000250.1 Protein Homology CDS 6974 7681 . + 0 ID=cds-WP_060074675.1;Parent=gene-LDO49_RS24270;Dbxref=GenBank:WP_060074675.1;Name=WP_060074675.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896990.1;locus_tag=LDO49_RS24270;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_060074675.1;transl_table=11 NZ_CAJZAV010000250.1 RefSeq gene 7713 8678 . - . ID=gene-LDO49_RS24275;Name=LDO49_RS24275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24275;old_locus_tag=BCEP4_430009 NZ_CAJZAV010000250.1 Protein Homology CDS 7713 8678 . - 0 ID=cds-WP_060074676.1;Parent=gene-LDO49_RS24275;Dbxref=GenBank:WP_060074676.1;Name=WP_060074676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352037.1;locus_tag=LDO49_RS24275;product=LysR family transcriptional regulator;protein_id=WP_060074676.1;transl_table=11 NZ_CAJZAV010000250.1 RefSeq gene 8889 9353 . + . ID=gene-LDO49_RS24280;Name=LDO49_RS24280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24280;old_locus_tag=BCEP4_430010 NZ_CAJZAV010000250.1 Protein Homology CDS 8889 9353 . + 0 ID=cds-WP_059488488.1;Parent=gene-LDO49_RS24280;Dbxref=GenBank:WP_059488488.1;Name=WP_059488488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757932.1;locus_tag=LDO49_RS24280;product=RidA family protein;protein_id=WP_059488488.1;transl_table=11 NZ_CAJZAV010000250.1 RefSeq gene 9396 10583 . - . ID=gene-LDO49_RS24285;Name=LDO49_RS24285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24285;old_locus_tag=BCEP4_430011 NZ_CAJZAV010000250.1 Protein Homology CDS 9396 10583 . - 0 ID=cds-WP_372585866.1;Parent=gene-LDO49_RS24285;Dbxref=GenBank:WP_372585866.1;Name=WP_372585866.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493921.1;locus_tag=LDO49_RS24285;product=alpha-hydroxy acid oxidase;protein_id=WP_372585866.1;transl_table=11 NZ_CAJZAV010000250.1 RefSeq gene 10753 11640 . + . ID=gene-LDO49_RS24290;Name=LDO49_RS24290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24290;old_locus_tag=BCEP4_430012 NZ_CAJZAV010000250.1 Protein Homology CDS 10753 11640 . + 0 ID=cds-WP_224052442.1;Parent=gene-LDO49_RS24290;Dbxref=GenBank:WP_224052442.1;Name=WP_224052442.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004546956.1;locus_tag=LDO49_RS24290;product=LysR family transcriptional regulator;protein_id=WP_224052442.1;transl_table=11 NZ_CAJZAV010000250.1 RefSeq gene 11697 13016 . - . ID=gene-LDO49_RS24295;Name=LDO49_RS24295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24295;old_locus_tag=BCEP4_430013 NZ_CAJZAV010000250.1 Protein Homology CDS 11697 13016 . - 0 ID=cds-WP_059621064.1;Parent=gene-LDO49_RS24295;Dbxref=GenBank:WP_059621064.1;Name=WP_059621064.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497243.1;locus_tag=LDO49_RS24295;product=MFS transporter;protein_id=WP_059621064.1;transl_table=11 NZ_CAJZAV010000250.1 RefSeq gene 13405 13824 . + . ID=gene-LDO49_RS24300;Name=LDO49_RS24300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24300;old_locus_tag=BCEP4_430014 NZ_CAJZAV010000250.1 Protein Homology CDS 13405 13824 . + 0 ID=cds-WP_042975135.1;Parent=gene-LDO49_RS24300;Dbxref=GenBank:WP_042975135.1;Name=WP_042975135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492628.1;locus_tag=LDO49_RS24300;product=organic hydroperoxide resistance protein;protein_id=WP_042975135.1;transl_table=11 NZ_CAJZAV010000250.1 RefSeq gene 13893 14219 . + . ID=gene-LDO49_RS24305;Name=LDO49_RS24305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24305;old_locus_tag=BCEP4_430015 NZ_CAJZAV010000250.1 Protein Homology CDS 13893 14219 . + 0 ID=cds-WP_081067386.1;Parent=gene-LDO49_RS24305;Dbxref=GenBank:WP_081067386.1;Name=WP_081067386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363927.1;locus_tag=LDO49_RS24305;product=DUF4148 domain-containing protein;protein_id=WP_081067386.1;transl_table=11 NZ_CAJZAV010000250.1 RefSeq pseudogene 14312 14411 . + . ID=gene-LDO49_RS38330;Name=LDO49_RS38330;end_range=14411,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38330;partial=true;pseudo=true NZ_CAJZAV010000250.1 Protein Homology CDS 14312 14411 . + 0 ID=cds-LDO49_RS38330;Parent=gene-LDO49_RS38330;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=14411,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694289.1;locus_tag=LDO49_RS38330;partial=true;product=DUF4148 domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAV010000250.1 RefSeq pseudogene 14427 15036 . + . ID=gene-LDO49_RS38335;Name=LDO49_RS38335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38335;partial=true;pseudo=true;start_range=.,14427 NZ_CAJZAV010000250.1 Protein Homology CDS 14427 15036 . + 0 ID=cds-LDO49_RS38335;Parent=gene-LDO49_RS38335;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328507.1;locus_tag=LDO49_RS38335;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;start_range=.,14427;transl_table=11 NZ_CAJZAV010000250.1 RefSeq gene 15085 15540 . - . ID=gene-LDO49_RS24320;Name=LDO49_RS24320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24320;old_locus_tag=BCEP4_430019 NZ_CAJZAV010000250.1 Protein Homology CDS 15085 15540 . - 0 ID=cds-WP_060074678.1;Parent=gene-LDO49_RS24320;Dbxref=GenBank:WP_060074678.1;Name=WP_060074678.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754188.1;locus_tag=LDO49_RS24320;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_060074678.1;transl_table=11 NZ_CAJZAV010000250.1 RefSeq gene 15664 15792 . - . ID=gene-LDO49_RS37350;Name=LDO49_RS37350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37350;old_locus_tag=BCEP4_430021 NZ_CAJZAV010000250.1 Protein Homology CDS 15664 15792 . - 0 ID=cds-WP_260429908.1;Parent=gene-LDO49_RS37350;Dbxref=GenBank:WP_260429908.1;Name=WP_260429908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723047.1;locus_tag=LDO49_RS37350;product=hypothetical protein;protein_id=WP_260429908.1;transl_table=11 NZ_CAJZAV010000250.1 RefSeq gene 15789 16160 . - . ID=gene-LDO49_RS24325;Name=LDO49_RS24325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24325;old_locus_tag=BCEP4_430022 NZ_CAJZAV010000250.1 Protein Homology CDS 15789 16160 . - 0 ID=cds-WP_060074679.1;Parent=gene-LDO49_RS24325;Dbxref=GenBank:WP_060074679.1;Name=WP_060074679.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764300.1;locus_tag=LDO49_RS24325;product=GFA family protein;protein_id=WP_060074679.1;transl_table=11 NZ_CAJZAV010000250.1 RefSeq pseudogene 16314 17413 . - . ID=gene-LDO49_RS24330;Name=LDO49_RS24330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS24330;pseudo=true NZ_CAJZAV010000250.1 Protein Homology CDS 16314 17413 . - 0 ID=cds-LDO49_RS24330;Parent=gene-LDO49_RS24330;Note=frameshifted%3B internal stop;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414175.1;locus_tag=LDO49_RS24330;product=NAD(P)H-dependent flavin oxidoreductase;pseudo=true;transl_table=11 NZ_CAJZAV010000250.1 RefSeq pseudogene 17717 18590 . - . ID=gene-LDO49_RS24335;Name=LDO49_RS24335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS24335;old_locus_tag=BCEP4_430026;partial=true;pseudo=true;start_range=.,17717 NZ_CAJZAV010000250.1 Protein Homology CDS 17717 18590 . - 0 ID=cds-LDO49_RS24335;Parent=gene-LDO49_RS24335;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352021.1;locus_tag=LDO49_RS24335;partial=true;product=MFS transporter;pseudo=true;start_range=.,17717;transl_table=11 NZ_CAJZAV010000250.1 RefSeq pseudogene 18848 19728 . - . ID=gene-LDO49_RS24340;Name=LDO49_RS24340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS24340;pseudo=true NZ_CAJZAV010000250.1 Protein Homology CDS 18848 19728 . - 0 ID=cds-LDO49_RS24340;Parent=gene-LDO49_RS24340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352020.1;locus_tag=LDO49_RS24340;product=LysR substrate-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAV010000250.1 RefSeq pseudogene 19816 20355 . - . ID=gene-LDO49_RS24345;Name=LDO49_RS24345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS24345;old_locus_tag=BCEP4_430031;partial=true;pseudo=true;start_range=.,19816 NZ_CAJZAV010000250.1 Protein Homology CDS 19816 20355 . - 0 ID=cds-LDO49_RS24345;Parent=gene-LDO49_RS24345;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482547.1;locus_tag=LDO49_RS24345;partial=true;product=IS66 family transposase zinc-finger binding domain-containing protein;pseudo=true;start_range=.,19816;transl_table=11 NZ_CAJZAV010000250.1 RefSeq gene 20501 20975 . + . ID=gene-LDO49_RS24350;Name=LDO49_RS24350;end_range=20975,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24350;partial=true NZ_CAJZAV010000250.1 Protein Homology CDS 20501 20975 . + 0 ID=cds-WP_224052443.1;Parent=gene-LDO49_RS24350;Dbxref=GenBank:WP_224052443.1;Name=WP_224052443.1;end_range=20975,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011872576.1;locus_tag=LDO49_RS24350;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_224052443.1;transl_table=11 ##sequence-region NZ_CAJZAV010000251.1 1 43684 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000251.1 RefSeq region 1 43684 . + . ID=NZ_CAJZAV010000251.1:1..43684;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_44 NZ_CAJZAV010000251.1 RefSeq gene 1 1118 . - . ID=gene-LDO49_RS24355;Name=LDO49_RS24355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24355;partial=true;start_range=.,1 NZ_CAJZAV010000251.1 Protein Homology CDS 1 1118 . - 0 ID=cds-WP_224052444.1;Parent=gene-LDO49_RS24355;Dbxref=GenBank:WP_224052444.1;Name=WP_224052444.1;Ontology_term=GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485256.1;locus_tag=LDO49_RS24355;partial=true;product=acetyl-CoA C-acetyltransferase;protein_id=WP_224052444.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 1218 3083 . - . ID=gene-LDO49_RS24360;Name=LDO49_RS24360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24360;old_locus_tag=BCEP4_440002 NZ_CAJZAV010000251.1 Protein Homology CDS 1218 3083 . - 0 ID=cds-WP_042977626.1;Parent=gene-LDO49_RS24360;Dbxref=GenBank:WP_042977626.1;Name=WP_042977626.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549702.1;locus_tag=LDO49_RS24360;product=PHA/PHB synthase family protein;protein_id=WP_042977626.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 3443 4294 . - . ID=gene-LDO49_RS24365;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=LDO49_RS24365;old_locus_tag=BCEP4_440004 NZ_CAJZAV010000251.1 Protein Homology CDS 3443 4294 . - 0 ID=cds-WP_060073147.1;Parent=gene-LDO49_RS24365;Dbxref=GenBank:WP_060073147.1;Name=WP_060073147.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544445.1;locus_tag=LDO49_RS24365;product=peptidoglycan editing factor PgeF;protein_id=WP_060073147.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 4301 5509 . - . ID=gene-LDO49_RS24370;Name=LDO49_RS24370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24370;old_locus_tag=BCEP4_440005 NZ_CAJZAV010000251.1 Protein Homology CDS 4301 5509 . - 0 ID=cds-WP_060073137.1;Parent=gene-LDO49_RS24370;Dbxref=GenBank:WP_060073137.1;Name=WP_060073137.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896926.1;locus_tag=LDO49_RS24370;product=RluA family pseudouridine synthase;protein_id=WP_060073137.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 5551 6375 . + . ID=gene-LDO49_RS24375;Name=LDO49_RS24375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24375;old_locus_tag=BCEP4_440006 NZ_CAJZAV010000251.1 Protein Homology CDS 5551 6375 . + 0 ID=cds-WP_021163132.1;Parent=gene-LDO49_RS24375;Dbxref=GenBank:WP_021163132.1;Name=WP_021163132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026946.1;locus_tag=LDO49_RS24375;product=outer membrane protein assembly factor BamD;protein_id=WP_021163132.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 6496 8742 . - . ID=gene-LDO49_RS24380;Name=LDO49_RS24380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24380;old_locus_tag=BCEP4_440007 NZ_CAJZAV010000251.1 Protein Homology CDS 6496 8742 . - 0 ID=cds-WP_060073135.1;Parent=gene-LDO49_RS24380;Dbxref=GenBank:WP_060073135.1;Name=WP_060073135.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352246.1;locus_tag=LDO49_RS24380;product=ATP-dependent DNA helicase;protein_id=WP_060073135.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 8798 9013 . - . ID=gene-LDO49_RS24385;Name=LDO49_RS24385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24385;old_locus_tag=BCEP4_440008 NZ_CAJZAV010000251.1 Protein Homology CDS 8798 9013 . - 0 ID=cds-WP_006478692.1;Parent=gene-LDO49_RS24385;Dbxref=GenBank:WP_006478692.1;Name=WP_006478692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103275.1;locus_tag=LDO49_RS24385;product=YdcH family protein;protein_id=WP_006478692.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 9091 9849 . - . ID=gene-LDO49_RS24390;Name=LDO49_RS24390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24390;old_locus_tag=BCEP4_440009 NZ_CAJZAV010000251.1 Protein Homology CDS 9091 9849 . - 0 ID=cds-WP_060073133.1;Parent=gene-LDO49_RS24390;Dbxref=GenBank:WP_060073133.1;Name=WP_060073133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478691.1;locus_tag=LDO49_RS24390;product=hypothetical protein;protein_id=WP_060073133.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 10010 12334 . + . ID=gene-LDO49_RS24395;Name=LDO49_RS24395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24395;old_locus_tag=BCEP4_440010 NZ_CAJZAV010000251.1 Protein Homology CDS 10010 12334 . + 0 ID=cds-WP_059489917.1;Parent=gene-LDO49_RS24395;Dbxref=GenBank:WP_059489917.1;Name=WP_059489917.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352249.1;locus_tag=LDO49_RS24395;product=Tex family protein;protein_id=WP_059489917.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 12747 13775 . + . ID=gene-LDO49_RS24400;Name=LDO49_RS24400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24400;old_locus_tag=BCEP4_440012 NZ_CAJZAV010000251.1 Protein Homology CDS 12747 13775 . + 0 ID=cds-WP_042977624.1;Parent=gene-LDO49_RS24400;Dbxref=GenBank:WP_042977624.1;Name=WP_042977624.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040195.5;locus_tag=LDO49_RS24400;product=terpene synthase family protein;protein_id=WP_042977624.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 13798 15714 . - . ID=gene-LDO49_RS24405;Name=LDO49_RS24405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24405;old_locus_tag=BCEP4_440013 NZ_CAJZAV010000251.1 Protein Homology CDS 13798 15714 . - 0 ID=cds-WP_021163125.1;Parent=gene-LDO49_RS24405;Dbxref=GenBank:WP_021163125.1;Name=WP_021163125.1;Ontology_term=GO:0071805,GO:0015079,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transmembrane transport|0071805||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478689.1;locus_tag=LDO49_RS24405;product=potassium transporter Kup;protein_id=WP_021163125.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 15991 16587 . - . ID=gene-LDO49_RS24410;Name=LDO49_RS24410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24410;old_locus_tag=BCEP4_440014 NZ_CAJZAV010000251.1 Protein Homology CDS 15991 16587 . - 0 ID=cds-WP_021163124.1;Parent=gene-LDO49_RS24410;Dbxref=GenBank:WP_021163124.1;Name=WP_021163124.1;Ontology_term=GO:0006144,GO:0106130;gbkey=CDS;go_function=purine phosphoribosyltransferase activity|0106130||IEA;go_process=purine nucleobase metabolic process|0006144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478688.1;locus_tag=LDO49_RS24410;product=phosphoribosyltransferase;protein_id=WP_021163124.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 16594 17940 . - . ID=gene-LDO49_RS24415;Name=LDO49_RS24415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24415;old_locus_tag=BCEP4_440015 NZ_CAJZAV010000251.1 Protein Homology CDS 16594 17940 . - 0 ID=cds-WP_124841753.1;Parent=gene-LDO49_RS24415;Dbxref=GenBank:WP_124841753.1;Name=WP_124841753.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193462.1;locus_tag=LDO49_RS24415;product=adenylosuccinate synthase;protein_id=WP_124841753.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 18054 19202 . - . ID=gene-LDO49_RS24420;Name=LDO49_RS24420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24420;old_locus_tag=BCEP4_440016 NZ_CAJZAV010000251.1 Protein Homology CDS 18054 19202 . - 0 ID=cds-WP_021163122.1;Parent=gene-LDO49_RS24420;Dbxref=GenBank:WP_021163122.1;Name=WP_021163122.1;Ontology_term=GO:0000105;gbkey=CDS;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192327.1;locus_tag=LDO49_RS24420;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=WP_021163122.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 19306 19497 . - . ID=gene-LDO49_RS24425;Name=LDO49_RS24425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24425;old_locus_tag=BCEP4_440017 NZ_CAJZAV010000251.1 Protein Homology CDS 19306 19497 . - 0 ID=cds-WP_011352254.1;Parent=gene-LDO49_RS24425;Dbxref=GenBank:WP_011352254.1;Name=WP_011352254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009973312.1;locus_tag=LDO49_RS24425;product=DUF2065 domain-containing protein;protein_id=WP_011352254.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 19534 20433 . - . ID=gene-LDO49_RS24430;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=LDO49_RS24430;old_locus_tag=BCEP4_440018 NZ_CAJZAV010000251.1 Protein Homology CDS 19534 20433 . - 0 ID=cds-WP_060073125.1;Parent=gene-LDO49_RS24430;Dbxref=GenBank:WP_060073125.1;Name=WP_060073125.1;Ontology_term=GO:0052547,GO:0016020,GO:0098797;gbkey=CDS;gene=hflC;go_component=membrane|0016020||IEA,plasma membrane protein complex|0098797||IEA;go_process=regulation of peptidase activity|0052547||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896916.1;locus_tag=LDO49_RS24430;product=protease modulator HflC;protein_id=WP_060073125.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 20449 21789 . - . ID=gene-LDO49_RS24435;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=LDO49_RS24435;old_locus_tag=BCEP4_440019 NZ_CAJZAV010000251.1 Protein Homology CDS 20449 21789 . - 0 ID=cds-WP_224052445.1;Parent=gene-LDO49_RS24435;Dbxref=GenBank:WP_224052445.1;Name=WP_224052445.1;Ontology_term=GO:0045861,GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;go_process=negative regulation of proteolysis|0045861||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404714.1;locus_tag=LDO49_RS24435;product=FtsH protease activity modulator HflK;protein_id=WP_224052445.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 21837 23012 . - . ID=gene-LDO49_RS24440;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=LDO49_RS24440;old_locus_tag=BCEP4_440020 NZ_CAJZAV010000251.1 Protein Homology CDS 21837 23012 . - 0 ID=cds-WP_175829770.1;Parent=gene-LDO49_RS24440;Dbxref=GenBank:WP_175829770.1;Name=WP_175829770.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521337.1;locus_tag=LDO49_RS24440;product=GTPase HflX;protein_id=WP_175829770.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 23085 23324 . - . ID=gene-LDO49_RS24445;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=LDO49_RS24445;old_locus_tag=BCEP4_440021 NZ_CAJZAV010000251.1 Protein Homology CDS 23085 23324 . - 0 ID=cds-WP_006399927.1;Parent=gene-LDO49_RS24445;Dbxref=GenBank:WP_006399927.1;Name=WP_006399927.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399927.1;locus_tag=LDO49_RS24445;product=RNA chaperone Hfq;protein_id=WP_006399927.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 23480 24817 . - . ID=gene-LDO49_RS24450;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=LDO49_RS24450;old_locus_tag=BCEP4_440022 NZ_CAJZAV010000251.1 Protein Homology CDS 23480 24817 . - 0 ID=cds-WP_027787239.1;Parent=gene-LDO49_RS24450;Dbxref=GenBank:WP_027787239.1;Name=WP_027787239.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352258.1;locus_tag=LDO49_RS24450;product=ribosome biogenesis GTPase Der;protein_id=WP_027787239.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 25065 26210 . - . ID=gene-LDO49_RS24455;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=LDO49_RS24455;old_locus_tag=BCEP4_440023 NZ_CAJZAV010000251.1 Protein Homology CDS 25065 26210 . - 0 ID=cds-WP_042977620.1;Parent=gene-LDO49_RS24455;Dbxref=GenBank:WP_042977620.1;Name=WP_042977620.1;Ontology_term=GO:0005515,GO:0009279;gbkey=CDS;gene=bamB;go_component=cell outer membrane|0009279||IEA;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875493.1;locus_tag=LDO49_RS24455;product=outer membrane protein assembly factor BamB;protein_id=WP_042977620.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 26252 26881 . - . ID=gene-LDO49_RS24460;Name=LDO49_RS24460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24460;old_locus_tag=BCEP4_440024 NZ_CAJZAV010000251.1 Protein Homology CDS 26252 26881 . - 0 ID=cds-WP_124841755.1;Parent=gene-LDO49_RS24460;Dbxref=GenBank:WP_124841755.1;Name=WP_124841755.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890825.1;locus_tag=LDO49_RS24460;product=tetratricopeptide repeat protein;protein_id=WP_124841755.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 26937 28277 . - . ID=gene-LDO49_RS24465;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=LDO49_RS24465;old_locus_tag=BCEP4_440025 NZ_CAJZAV010000251.1 Protein Homology CDS 26937 28277 . - 0 ID=cds-WP_027787236.1;Parent=gene-LDO49_RS24465;Dbxref=GenBank:WP_027787236.1;Name=WP_027787236.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764216.1;locus_tag=LDO49_RS24465;product=histidine--tRNA ligase;protein_id=WP_027787236.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 28294 29598 . - . ID=gene-LDO49_RS24470;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=LDO49_RS24470;old_locus_tag=BCEP4_440026 NZ_CAJZAV010000251.1 Protein Homology CDS 28294 29598 . - 0 ID=cds-WP_027787235.1;Parent=gene-LDO49_RS24470;Dbxref=GenBank:WP_027787235.1;Name=WP_027787235.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483314.1;locus_tag=LDO49_RS24470;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_027787235.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 29711 30739 . - . ID=gene-LDO49_RS24475;Name=LDO49_RS24475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24475;old_locus_tag=BCEP4_440027 NZ_CAJZAV010000251.1 Protein Homology CDS 29711 30739 . - 0 ID=cds-WP_059489924.1;Parent=gene-LDO49_RS24475;Dbxref=GenBank:WP_059489924.1;Name=WP_059489924.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496411.1;locus_tag=LDO49_RS24475;product=helix-turn-helix domain-containing protein;protein_id=WP_059489924.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 30905 32044 . - . ID=gene-LDO49_RS24480;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=LDO49_RS24480;old_locus_tag=BCEP4_440028 NZ_CAJZAV010000251.1 Protein Homology CDS 30905 32044 . - 0 ID=cds-WP_048021097.1;Parent=gene-LDO49_RS24480;Dbxref=GenBank:WP_048021097.1;Name=WP_048021097.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012433532.1;locus_tag=LDO49_RS24480;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_048021097.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 32100 32525 . - . ID=gene-LDO49_RS24485;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=LDO49_RS24485;old_locus_tag=BCEP4_440029 NZ_CAJZAV010000251.1 Protein Homology CDS 32100 32525 . - 0 ID=cds-WP_006478674.1;Parent=gene-LDO49_RS24485;Dbxref=GenBank:WP_006478674.1;Name=WP_006478674.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012433533.1;locus_tag=LDO49_RS24485;product=nucleoside-diphosphate kinase;protein_id=WP_006478674.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 32775 33473 . + . ID=gene-LDO49_RS24490;Name=LDO49_RS24490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24490;old_locus_tag=BCEP4_440030 NZ_CAJZAV010000251.1 Protein Homology CDS 32775 33473 . + 0 ID=cds-WP_006761414.1;Parent=gene-LDO49_RS24490;Dbxref=GenBank:WP_006761414.1;Name=WP_006761414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698250.1;locus_tag=LDO49_RS24490;product=Bax inhibitor-1/YccA family protein;protein_id=WP_006761414.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 33539 34936 . - . ID=gene-LDO49_RS24495;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=LDO49_RS24495;old_locus_tag=BCEP4_440031 NZ_CAJZAV010000251.1 Protein Homology CDS 33539 34936 . - 0 ID=cds-WP_081052719.1;Parent=gene-LDO49_RS24495;Dbxref=GenBank:WP_081052719.1;Name=WP_081052719.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192701.1;locus_tag=LDO49_RS24495;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_081052719.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 35148 36002 . + . ID=gene-LDO49_RS24500;Name=LDO49_RS24500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24500;old_locus_tag=BCEP4_440032 NZ_CAJZAV010000251.1 Protein Homology CDS 35148 36002 . + 0 ID=cds-WP_224052446.1;Parent=gene-LDO49_RS24500;Dbxref=GenBank:WP_224052446.1;Name=WP_224052446.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723104.1;locus_tag=LDO49_RS24500;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_224052446.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 36033 36809 . - . ID=gene-LDO49_RS24505;Name=LDO49_RS24505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24505;old_locus_tag=BCEP4_440033 NZ_CAJZAV010000251.1 Protein Homology CDS 36033 36809 . - 0 ID=cds-WP_021163110.1;Parent=gene-LDO49_RS24505;Dbxref=GenBank:WP_021163110.1;Name=WP_021163110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851735.1;locus_tag=LDO49_RS24505;product=3'-5' exonuclease;protein_id=WP_021163110.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 36813 37901 . - . ID=gene-LDO49_RS24510;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=LDO49_RS24510;old_locus_tag=BCEP4_440034 NZ_CAJZAV010000251.1 Protein Homology CDS 36813 37901 . - 0 ID=cds-WP_048021092.1;Parent=gene-LDO49_RS24510;Dbxref=GenBank:WP_048021092.1;Name=WP_048021092.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193640.1;locus_tag=LDO49_RS24510;product=RNA polymerase sigma factor RpoS;protein_id=WP_048021092.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 37913 38797 . - . ID=gene-LDO49_RS24515;Name=LDO49_RS24515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24515;old_locus_tag=BCEP4_440035 NZ_CAJZAV010000251.1 Protein Homology CDS 37913 38797 . - 0 ID=cds-WP_224052447.1;Parent=gene-LDO49_RS24515;Dbxref=GenBank:WP_224052447.1;Name=WP_224052447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478669.1;locus_tag=LDO49_RS24515;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_224052447.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 38803 39735 . - . ID=gene-LDO49_RS24520;Name=LDO49_RS24520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24520;old_locus_tag=BCEP4_440036 NZ_CAJZAV010000251.1 Protein Homology CDS 38803 39735 . - 0 ID=cds-WP_059587898.1;Parent=gene-LDO49_RS24520;Dbxref=GenBank:WP_059587898.1;Name=WP_059587898.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352272.1;locus_tag=LDO49_RS24520;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_059587898.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 39732 40493 . - . ID=gene-LDO49_RS24525;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=LDO49_RS24525;old_locus_tag=BCEP4_440037 NZ_CAJZAV010000251.1 Protein Homology CDS 39732 40493 . - 0 ID=cds-WP_021164242.1;Parent=gene-LDO49_RS24525;Dbxref=GenBank:WP_021164242.1;Name=WP_021164242.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011488250.1;locus_tag=LDO49_RS24525;product=5'/3'-nucleotidase SurE;protein_id=WP_021164242.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 40716 41921 . - . ID=gene-LDO49_RS24530;Name=LDO49_RS24530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24530;old_locus_tag=BCEP4_440038 NZ_CAJZAV010000251.1 Protein Homology CDS 40716 41921 . - 0 ID=cds-WP_027787226.1;Parent=gene-LDO49_RS24530;Dbxref=GenBank:WP_027787226.1;Name=WP_027787226.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191282.1;locus_tag=LDO49_RS24530;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_027787226.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 41970 42566 . - . ID=gene-LDO49_RS24535;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=LDO49_RS24535;old_locus_tag=BCEP4_440039 NZ_CAJZAV010000251.1 Protein Homology CDS 41970 42566 . - 0 ID=cds-WP_006478665.1;Parent=gene-LDO49_RS24535;Dbxref=GenBank:WP_006478665.1;Name=WP_006478665.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875477.1;locus_tag=LDO49_RS24535;product=recombination mediator RecR;protein_id=WP_006478665.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 42598 42924 . - . ID=gene-LDO49_RS24540;Name=LDO49_RS24540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24540;old_locus_tag=BCEP4_440040 NZ_CAJZAV010000251.1 Protein Homology CDS 42598 42924 . - 0 ID=cds-WP_006482124.1;Parent=gene-LDO49_RS24540;Dbxref=GenBank:WP_006482124.1;Name=WP_006482124.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006048866.1;locus_tag=LDO49_RS24540;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_006482124.1;transl_table=11 NZ_CAJZAV010000251.1 RefSeq gene 43017 43684 . - . ID=gene-LDO49_RS24545;Name=LDO49_RS24545;end_range=43684,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24545;old_locus_tag=BCEP4_440041;partial=true NZ_CAJZAV010000251.1 Protein Homology CDS 43017 43684 . - 2 ID=cds-WP_290369878.1;Parent=gene-LDO49_RS24545;Dbxref=GenBank:WP_290369878.1;Name=WP_290369878.1;Ontology_term=GO:0003887;end_range=43684,.;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549680.1;locus_tag=LDO49_RS24545;partial=true;product=DNA polymerase III subunit gamma/tau C-terminal domain-containing protein;protein_id=WP_290369878.1;transl_table=11 ##sequence-region NZ_CAJZAV010000252.1 1 33149 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000252.1 RefSeq region 1 33149 . + . ID=NZ_CAJZAV010000252.1:1..33149;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_45 NZ_CAJZAV010000252.1 RefSeq gene 1 978 . + . ID=gene-LDO49_RS24550;Name=LDO49_RS24550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24550;old_locus_tag=BCEP4_450001;partial=true;start_range=.,1 NZ_CAJZAV010000252.1 Protein Homology CDS 1 978 . + 0 ID=cds-WP_224052448.1;Parent=gene-LDO49_RS24550;Dbxref=GenBank:WP_224052448.1;Name=WP_224052448.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547878.1;locus_tag=LDO49_RS24550;partial=true;product=OmpW/AlkL family protein;protein_id=WP_224052448.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 1067 2017 . + . ID=gene-LDO49_RS24555;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=LDO49_RS24555;old_locus_tag=BCEP4_450002 NZ_CAJZAV010000252.1 Protein Homology CDS 1067 2017 . + 0 ID=cds-WP_021159485.1;Parent=gene-LDO49_RS24555;Dbxref=GenBank:WP_021159485.1;Name=WP_021159485.1;Ontology_term=GO:0006793,GO:0008976;gbkey=CDS;gene=ppk2;go_function=polyphosphate kinase activity|0008976||IEA;go_process=phosphorus metabolic process|0006793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547877.1;locus_tag=LDO49_RS24555;product=polyphosphate kinase 2;protein_id=WP_021159485.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 2088 2675 . - . ID=gene-LDO49_RS24560;Name=LDO49_RS24560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24560;old_locus_tag=BCEP4_450003 NZ_CAJZAV010000252.1 Protein Homology CDS 2088 2675 . - 0 ID=cds-WP_060071660.1;Parent=gene-LDO49_RS24560;Dbxref=GenBank:WP_060071660.1;Name=WP_060071660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413833.1;locus_tag=LDO49_RS24560;product=IMPACT family protein;protein_id=WP_060071660.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 2924 3574 . - . ID=gene-LDO49_RS24565;Name=LDO49_RS24565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24565;old_locus_tag=BCEP4_450004 NZ_CAJZAV010000252.1 Protein Homology CDS 2924 3574 . - 0 ID=cds-WP_060071663.1;Parent=gene-LDO49_RS24565;Dbxref=GenBank:WP_060071663.1;Name=WP_060071663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355433.1;locus_tag=LDO49_RS24565;product=DUF2625 family protein;protein_id=WP_060071663.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 3650 4507 . - . ID=gene-LDO49_RS24570;Name=LDO49_RS24570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24570;old_locus_tag=BCEP4_450005 NZ_CAJZAV010000252.1 Protein Homology CDS 3650 4507 . - 0 ID=cds-WP_059485054.1;Parent=gene-LDO49_RS24570;Dbxref=GenBank:WP_059485054.1;Name=WP_059485054.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493284.1;locus_tag=LDO49_RS24570;product=LysR family transcriptional regulator;protein_id=WP_059485054.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 4633 5211 . + . ID=gene-LDO49_RS24575;Name=LDO49_RS24575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24575;old_locus_tag=BCEP4_450006 NZ_CAJZAV010000252.1 Protein Homology CDS 4633 5211 . + 0 ID=cds-WP_060052816.1;Parent=gene-LDO49_RS24575;Dbxref=GenBank:WP_060052816.1;Name=WP_060052816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495007.1;locus_tag=LDO49_RS24575;product=DUF4865 family protein;protein_id=WP_060052816.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 5208 5381 . + . ID=gene-LDO49_RS24580;Name=LDO49_RS24580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24580;old_locus_tag=BCEP4_450007 NZ_CAJZAV010000252.1 GeneMarkS-2+ CDS 5208 5381 . + 0 ID=cds-WP_155634187.1;Parent=gene-LDO49_RS24580;Dbxref=GenBank:WP_155634187.1;Name=WP_155634187.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS24580;product=hypothetical protein;protein_id=WP_155634187.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 5458 7659 . - . ID=gene-LDO49_RS24585;Name=LDO49_RS24585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24585;old_locus_tag=BCEP4_450008 NZ_CAJZAV010000252.1 Protein Homology CDS 5458 7659 . - 0 ID=cds-WP_048021830.1;Parent=gene-LDO49_RS24585;Dbxref=GenBank:WP_048021830.1;Name=WP_048021830.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338295.1;locus_tag=LDO49_RS24585;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=WP_048021830.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 8256 9380 . - . ID=gene-LDO49_RS24590;Name=LDO49_RS24590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24590;old_locus_tag=BCEP4_450009 NZ_CAJZAV010000252.1 Protein Homology CDS 8256 9380 . - 0 ID=cds-WP_059485051.1;Parent=gene-LDO49_RS24590;Dbxref=GenBank:WP_059485051.1;Name=WP_059485051.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018442459.1;locus_tag=LDO49_RS24590;product=polysaccharide biosynthesis/export family protein;protein_id=WP_059485051.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 9888 10934 . + . ID=gene-LDO49_RS24595;Name=LDO49_RS24595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24595;old_locus_tag=BCEP4_450011 NZ_CAJZAV010000252.1 Protein Homology CDS 9888 10934 . + 0 ID=cds-WP_059485050.1;Parent=gene-LDO49_RS24595;Dbxref=GenBank:WP_059485050.1;Name=WP_059485050.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008920183.1;locus_tag=LDO49_RS24595;product=GHMP family kinase ATP-binding protein;protein_id=WP_059485050.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 10931 11512 . + . ID=gene-LDO49_RS24600;Name=LDO49_RS24600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24600;old_locus_tag=BCEP4_450012 NZ_CAJZAV010000252.1 Protein Homology CDS 10931 11512 . + 0 ID=cds-WP_059485049.1;Parent=gene-LDO49_RS24600;Dbxref=GenBank:WP_059485049.1;Name=WP_059485049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601477.1;locus_tag=LDO49_RS24600;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_059485049.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 11509 12240 . + . ID=gene-LDO49_RS24605;Name=LDO49_RS24605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24605;old_locus_tag=BCEP4_450013 NZ_CAJZAV010000252.1 Protein Homology CDS 11509 12240 . + 0 ID=cds-WP_059485048.1;Parent=gene-LDO49_RS24605;Dbxref=GenBank:WP_059485048.1;Name=WP_059485048.1;Ontology_term=GO:0000166,GO:0016779,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleotidyltransferase activity|0016779||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008920185.1;locus_tag=LDO49_RS24605;product=nucleotidyltransferase family protein;protein_id=WP_059485048.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 12230 12802 . + . ID=gene-LDO49_RS24610;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=LDO49_RS24610;old_locus_tag=BCEP4_450014 NZ_CAJZAV010000252.1 Protein Homology CDS 12230 12802 . + 0 ID=cds-WP_059485047.1;Parent=gene-LDO49_RS24610;Dbxref=GenBank:WP_059485047.1;Name=WP_059485047.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479202.1;locus_tag=LDO49_RS24610;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_059485047.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 12985 15207 . + . ID=gene-LDO49_RS24615;Name=LDO49_RS24615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24615;old_locus_tag=BCEP4_450016 NZ_CAJZAV010000252.1 Protein Homology CDS 12985 15207 . + 0 ID=cds-WP_224052451.1;Parent=gene-LDO49_RS24615;Dbxref=GenBank:WP_224052451.1;Name=WP_224052451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479201.1;locus_tag=LDO49_RS24615;product=GNVR domain-containing protein;protein_id=WP_224052451.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 15250 16425 . + . ID=gene-LDO49_RS24620;Name=LDO49_RS24620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24620;old_locus_tag=BCEP4_450017 NZ_CAJZAV010000252.1 Protein Homology CDS 15250 16425 . + 0 ID=cds-WP_224052452.1;Parent=gene-LDO49_RS24620;Dbxref=GenBank:WP_224052452.1;Name=WP_224052452.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012744.6;locus_tag=LDO49_RS24620;product=glycosyltransferase;protein_id=WP_224052452.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 16443 17876 . + . ID=gene-LDO49_RS24625;Name=LDO49_RS24625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24625;old_locus_tag=BCEP4_450018 NZ_CAJZAV010000252.1 Protein Homology CDS 16443 17876 . + 0 ID=cds-WP_060071940.1;Parent=gene-LDO49_RS24625;Dbxref=GenBank:WP_060071940.1;Name=WP_060071940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493288.1;locus_tag=LDO49_RS24625;product=DUF6418 domain-containing protein;protein_id=WP_060071940.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 17873 19111 . + . ID=gene-LDO49_RS24630;Name=LDO49_RS24630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24630;old_locus_tag=BCEP4_450019 NZ_CAJZAV010000252.1 GeneMarkS-2+ CDS 17873 19111 . + 0 ID=cds-WP_059485044.1;Parent=gene-LDO49_RS24630;Dbxref=GenBank:WP_059485044.1;Name=WP_059485044.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS24630;product=hypothetical protein;protein_id=WP_059485044.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 19164 20372 . + . ID=gene-LDO49_RS24635;Name=LDO49_RS24635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24635;old_locus_tag=BCEP4_450020 NZ_CAJZAV010000252.1 GeneMarkS-2+ CDS 19164 20372 . + 0 ID=cds-WP_185633897.1;Parent=gene-LDO49_RS24635;Dbxref=GenBank:WP_185633897.1;Name=WP_185633897.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS24635;product=glycosyltransferase;protein_id=WP_185633897.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 20687 22378 . + . ID=gene-LDO49_RS24640;Name=LDO49_RS24640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24640;old_locus_tag=BCEP4_450022 NZ_CAJZAV010000252.1 Protein Homology CDS 20687 22378 . + 0 ID=cds-WP_060071674.1;Parent=gene-LDO49_RS24640;Dbxref=GenBank:WP_060071674.1;Name=WP_060071674.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008353308.1;locus_tag=LDO49_RS24640;product=serine aminopeptidase domain-containing protein;protein_id=WP_060071674.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 22489 23655 . + . ID=gene-LDO49_RS24645;Name=LDO49_RS24645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24645;old_locus_tag=BCEP4_450023 NZ_CAJZAV010000252.1 Protein Homology CDS 22489 23655 . + 0 ID=cds-WP_060071676.1;Parent=gene-LDO49_RS24645;Dbxref=GenBank:WP_060071676.1;Name=WP_060071676.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479198.1;locus_tag=LDO49_RS24645;product=acyltransferase family protein;protein_id=WP_060071676.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 23860 25029 . + . ID=gene-LDO49_RS24650;Name=LDO49_RS24650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24650;old_locus_tag=BCEP4_450024 NZ_CAJZAV010000252.1 Protein Homology CDS 23860 25029 . + 0 ID=cds-WP_372585868.1;Parent=gene-LDO49_RS24650;Dbxref=GenBank:WP_372585868.1;Name=WP_372585868.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522826.1;locus_tag=LDO49_RS24650;product=glycosyltransferase family 4 protein;protein_id=WP_372585868.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 25291 26394 . + . ID=gene-LDO49_RS24655;Name=LDO49_RS24655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24655;old_locus_tag=BCEP4_450026 NZ_CAJZAV010000252.1 Protein Homology CDS 25291 26394 . + 0 ID=cds-WP_224052453.1;Parent=gene-LDO49_RS24655;Dbxref=GenBank:WP_224052453.1;Name=WP_224052453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479196.1;locus_tag=LDO49_RS24655;product=hypothetical protein;protein_id=WP_224052453.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 26419 27984 . - . ID=gene-LDO49_RS24660;Name=LDO49_RS24660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24660;old_locus_tag=BCEP4_450027 NZ_CAJZAV010000252.1 Protein Homology CDS 26419 27984 . - 0 ID=cds-WP_059485039.1;Parent=gene-LDO49_RS24660;Dbxref=GenBank:WP_059485039.1;Name=WP_059485039.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217122.1;locus_tag=LDO49_RS24660;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_059485039.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 27981 28565 . - . ID=gene-LDO49_RS24665;Name=LDO49_RS24665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24665;old_locus_tag=BCEP4_450028 NZ_CAJZAV010000252.1 Protein Homology CDS 27981 28565 . - 0 ID=cds-WP_021159466.1;Parent=gene-LDO49_RS24665;Dbxref=GenBank:WP_021159466.1;Name=WP_021159466.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493292.1;locus_tag=LDO49_RS24665;product=GNAT family N-acetyltransferase;protein_id=WP_021159466.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 28546 28881 . - . ID=gene-LDO49_RS24670;Name=LDO49_RS24670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24670 NZ_CAJZAV010000252.1 GeneMarkS-2+ CDS 28546 28881 . - 0 ID=cds-WP_124537200.1;Parent=gene-LDO49_RS24670;Dbxref=GenBank:WP_124537200.1;Name=WP_124537200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS24670;product=hypothetical protein;protein_id=WP_124537200.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 30031 31422 . + . ID=gene-LDO49_RS24675;Name=LDO49_RS24675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24675;old_locus_tag=BCEP4_450031 NZ_CAJZAV010000252.1 Protein Homology CDS 30031 31422 . + 0 ID=cds-WP_042975033.1;Parent=gene-LDO49_RS24675;Dbxref=GenBank:WP_042975033.1;Name=WP_042975033.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217119.1;locus_tag=LDO49_RS24675;product=sigma-54 dependent transcriptional regulator;protein_id=WP_042975033.1;transl_table=11 NZ_CAJZAV010000252.1 RefSeq gene 31468 33149 . - . ID=gene-LDO49_RS24680;Name=LDO49_RS24680;end_range=33149,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24680;old_locus_tag=BCEP4_450032;partial=true NZ_CAJZAV010000252.1 Protein Homology CDS 31468 33149 . - 2 ID=cds-WP_224052454.1;Parent=gene-LDO49_RS24680;Dbxref=GenBank:WP_224052454.1;Name=WP_224052454.1;end_range=33149,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403707.1;locus_tag=LDO49_RS24680;partial=true;product=glycoside hydrolase family 2 protein;protein_id=WP_224052454.1;transl_table=11 ##sequence-region NZ_CAJZAV010000253.1 1 5842 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000253.1 RefSeq region 1 5842 . + . ID=NZ_CAJZAV010000253.1:1..5842;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_46 NZ_CAJZAV010000253.1 RefSeq gene 1 2108 . + . ID=gene-LDO49_RS24685;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=LDO49_RS24685;old_locus_tag=BCEP4_460001;partial=true;start_range=.,1 NZ_CAJZAV010000253.1 Protein Homology CDS 1 2108 . + 2 ID=cds-WP_224052455.1;Parent=gene-LDO49_RS24685;Dbxref=GenBank:WP_224052455.1;Name=WP_224052455.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498997.1;locus_tag=LDO49_RS24685;partial=true;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_224052455.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000253.1 RefSeq gene 2136 3692 . + . ID=gene-LDO49_RS24690;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=LDO49_RS24690;old_locus_tag=BCEP4_460003 NZ_CAJZAV010000253.1 Protein Homology CDS 2136 3692 . + 0 ID=cds-WP_021160834.1;Parent=gene-LDO49_RS24690;Dbxref=GenBank:WP_021160834.1;Name=WP_021160834.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004549777.1;locus_tag=LDO49_RS24690;product=cellulose biosynthesis protein BcsG;protein_id=WP_021160834.1;transl_table=11 NZ_CAJZAV010000253.1 RefSeq gene 3674 3877 . + . ID=gene-LDO49_RS24695;Name=LDO49_RS24695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24695;old_locus_tag=BCEP4_460002 NZ_CAJZAV010000253.1 Protein Homology CDS 3674 3877 . + 0 ID=cds-WP_042975818.1;Parent=gene-LDO49_RS24695;Dbxref=GenBank:WP_042975818.1;Name=WP_042975818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363646.1;locus_tag=LDO49_RS24695;product=hypothetical protein;protein_id=WP_042975818.1;transl_table=11 NZ_CAJZAV010000253.1 RefSeq gene 3947 4831 . - . ID=gene-LDO49_RS24700;Name=LDO49_RS24700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24700;old_locus_tag=BCEP4_460004 NZ_CAJZAV010000253.1 Protein Homology CDS 3947 4831 . - 0 ID=cds-WP_059554788.1;Parent=gene-LDO49_RS24700;Dbxref=GenBank:WP_059554788.1;Name=WP_059554788.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498995.1;locus_tag=LDO49_RS24700;product=pirin family protein;protein_id=WP_059554788.1;transl_table=11 NZ_CAJZAV010000253.1 RefSeq gene 4864 5256 . - . ID=gene-LDO49_RS24705;Name=LDO49_RS24705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24705;old_locus_tag=BCEP4_460005 NZ_CAJZAV010000253.1 Protein Homology CDS 4864 5256 . - 0 ID=cds-WP_021160831.1;Parent=gene-LDO49_RS24705;Dbxref=GenBank:WP_021160831.1;Name=WP_021160831.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656589.1;locus_tag=LDO49_RS24705;product=OsmC family protein;protein_id=WP_021160831.1;transl_table=11 NZ_CAJZAV010000253.1 RefSeq gene 5305 5842 . - . ID=gene-LDO49_RS24710;Name=LDO49_RS24710;end_range=5842,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24710;old_locus_tag=BCEP4_460006;partial=true NZ_CAJZAV010000253.1 Protein Homology CDS 5305 5842 . - 1 ID=cds-WP_224052456.1;Parent=gene-LDO49_RS24710;Dbxref=GenBank:WP_224052456.1;Name=WP_224052456.1;Ontology_term=GO:0006812,GO:0055085,GO:1902600,GO:0015297,GO:0016020;end_range=5842,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405009.1;locus_tag=LDO49_RS24710;partial=true;product=cation:proton antiporter domain-containing protein;protein_id=WP_224052456.1;transl_table=11 ##sequence-region NZ_CAJZAV010000254.1 1 56023 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000254.1 RefSeq region 1 56023 . + . ID=NZ_CAJZAV010000254.1:1..56023;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_47 NZ_CAJZAV010000254.1 RefSeq gene 1 611 . + . ID=gene-LDO49_RS24715;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=LDO49_RS24715;old_locus_tag=BCEP4_470001;partial=true;start_range=.,1 NZ_CAJZAV010000254.1 Protein Homology CDS 1 611 . + 2 ID=cds-WP_224052457.1;Parent=gene-LDO49_RS24715;Dbxref=GenBank:WP_224052457.1;Name=WP_224052457.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=lipid-A 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333983.1;locus_tag=LDO49_RS24715;partial=true;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_224052457.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 592 786 . + . ID=gene-LDO49_RS24720;Name=LDO49_RS24720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24720;old_locus_tag=BCEP4_470002 NZ_CAJZAV010000254.1 Protein Homology CDS 592 786 . + 0 ID=cds-WP_006482216.1;Parent=gene-LDO49_RS24720;Dbxref=GenBank:WP_006482216.1;Name=WP_006482216.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333984.1;locus_tag=LDO49_RS24720;product=Trm112 family protein;protein_id=WP_006482216.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 903 1694 . + . ID=gene-LDO49_RS24725;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=LDO49_RS24725;old_locus_tag=BCEP4_470003 NZ_CAJZAV010000254.1 Protein Homology CDS 903 1694 . + 0 ID=cds-WP_224052458.1;Parent=gene-LDO49_RS24725;Dbxref=GenBank:WP_224052458.1;Name=WP_224052458.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102035.1;locus_tag=LDO49_RS24725;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_224052458.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 1902 2564 . + . ID=gene-LDO49_RS24730;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=LDO49_RS24730;old_locus_tag=BCEP4_470004 NZ_CAJZAV010000254.1 Protein Homology CDS 1902 2564 . + 0 ID=cds-WP_021162571.1;Parent=gene-LDO49_RS24730;Dbxref=GenBank:WP_021162571.1;Name=WP_021162571.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=AMP kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398497.1;locus_tag=LDO49_RS24730;product=adenylate kinase;protein_id=WP_021162571.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 2874 3632 . + . ID=gene-LDO49_RS24735;Name=LDO49_RS24735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24735;old_locus_tag=BCEP4_470005 NZ_CAJZAV010000254.1 Protein Homology CDS 2874 3632 . + 0 ID=cds-WP_059855249.1;Parent=gene-LDO49_RS24735;Dbxref=GenBank:WP_059855249.1;Name=WP_059855249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189909.1;locus_tag=LDO49_RS24735;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_059855249.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 3703 4545 . - . ID=gene-LDO49_RS24740;Name=LDO49_RS24740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24740;old_locus_tag=BCEP4_470006 NZ_CAJZAV010000254.1 Protein Homology CDS 3703 4545 . - 0 ID=cds-WP_027789283.1;Parent=gene-LDO49_RS24740;Dbxref=GenBank:WP_027789283.1;Name=WP_027789283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892659.1;locus_tag=LDO49_RS24740;product=SirB1 family protein;protein_id=WP_027789283.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 4554 6104 . - . ID=gene-LDO49_RS24745;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=LDO49_RS24745;old_locus_tag=BCEP4_470007 NZ_CAJZAV010000254.1 Protein Homology CDS 4554 6104 . - 0 ID=cds-WP_021162568.1;Parent=gene-LDO49_RS24745;Dbxref=GenBank:WP_021162568.1;Name=WP_021162568.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750940.1;locus_tag=LDO49_RS24745;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_021162568.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 6409 6681 . + . ID=gene-LDO49_RS24750;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=LDO49_RS24750;old_locus_tag=BCEP4_470008 NZ_CAJZAV010000254.1 Protein Homology CDS 6409 6681 . + 0 ID=cds-WP_006482211.1;Parent=gene-LDO49_RS24750;Dbxref=GenBank:WP_006482211.1;Name=WP_006482211.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762077.1;locus_tag=LDO49_RS24750;product=30S ribosomal protein S20;protein_id=WP_006482211.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 6850 7170 . - . ID=gene-LDO49_RS24755;Name=LDO49_RS24755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24755;old_locus_tag=BCEP4_470009 NZ_CAJZAV010000254.1 Protein Homology CDS 6850 7170 . - 0 ID=cds-WP_021162567.1;Parent=gene-LDO49_RS24755;Dbxref=GenBank:WP_021162567.1;Name=WP_021162567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896238.1;locus_tag=LDO49_RS24755;product=DUF3579 domain-containing protein;protein_id=WP_021162567.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 7584 8513 . + . ID=gene-LDO49_RS24760;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=LDO49_RS24760;old_locus_tag=BCEP4_470010 NZ_CAJZAV010000254.1 Protein Homology CDS 7584 8513 . + 0 ID=cds-WP_027789281.1;Parent=gene-LDO49_RS24760;Dbxref=GenBank:WP_027789281.1;Name=WP_027789281.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190177.1;locus_tag=LDO49_RS24760;product=ornithine carbamoyltransferase;protein_id=WP_027789281.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 8604 9653 . - . ID=gene-LDO49_RS24765;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=LDO49_RS24765;old_locus_tag=BCEP4_470012 NZ_CAJZAV010000254.1 Protein Homology CDS 8604 9653 . - 0 ID=cds-WP_224052459.1;Parent=gene-LDO49_RS24765;Dbxref=GenBank:WP_224052459.1;Name=WP_224052459.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482213.1;locus_tag=LDO49_RS24765;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_224052459.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 9791 10276 . + . ID=gene-LDO49_RS24770;Name=LDO49_RS24770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24770;old_locus_tag=BCEP4_470013 NZ_CAJZAV010000254.1 Protein Homology CDS 9791 10276 . + 0 ID=cds-WP_021162564.1;Parent=gene-LDO49_RS24770;Dbxref=GenBank:WP_021162564.1;Name=WP_021162564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189237.1;locus_tag=LDO49_RS24770;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_021162564.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 10356 10994 . - . ID=gene-LDO49_RS24775;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=LDO49_RS24775;old_locus_tag=BCEP4_470014 NZ_CAJZAV010000254.1 Protein Homology CDS 10356 10994 . - 0 ID=cds-WP_224052460.1;Parent=gene-LDO49_RS24775;Dbxref=GenBank:WP_224052460.1;Name=WP_224052460.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352999.1;locus_tag=LDO49_RS24775;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_224052460.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 11109 11600 . - . ID=gene-LDO49_RS24780;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=LDO49_RS24780;old_locus_tag=BCEP4_470016 NZ_CAJZAV010000254.1 Protein Homology CDS 11109 11600 . - 0 ID=cds-WP_059590557.1;Parent=gene-LDO49_RS24780;Dbxref=GenBank:WP_059590557.1;Name=WP_059590557.1;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189587.1;locus_tag=LDO49_RS24780;product=Cys-tRNA(Pro) deacylase;protein_id=WP_059590557.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 11862 13424 . + . ID=gene-LDO49_RS24785;Name=LDO49_RS24785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24785;old_locus_tag=BCEP4_470015 NZ_CAJZAV010000254.1 Protein Homology CDS 11862 13424 . + 0 ID=cds-WP_224052461.1;Parent=gene-LDO49_RS24785;Dbxref=GenBank:WP_224052461.1;Name=WP_224052461.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546051.1;locus_tag=LDO49_RS24785;product=class I adenylate-forming enzyme family protein;protein_id=WP_224052461.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 13471 14421 . - . ID=gene-LDO49_RS24790;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=LDO49_RS24790;old_locus_tag=BCEP4_470018 NZ_CAJZAV010000254.1 Protein Homology CDS 13471 14421 . - 0 ID=cds-WP_021162559.1;Parent=gene-LDO49_RS24790;Dbxref=GenBank:WP_021162559.1;Name=WP_021162559.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410310.1;locus_tag=LDO49_RS24790;product=site-specific tyrosine recombinase XerD;protein_id=WP_021162559.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 14421 14888 . - . ID=gene-LDO49_RS24795;Name=LDO49_RS24795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24795;old_locus_tag=BCEP4_470019 NZ_CAJZAV010000254.1 Protein Homology CDS 14421 14888 . - 0 ID=cds-WP_021162558.1;Parent=gene-LDO49_RS24795;Dbxref=GenBank:WP_021162558.1;Name=WP_021162558.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024769.1;locus_tag=LDO49_RS24795;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_021162558.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 14953 16176 . - . ID=gene-LDO49_RS24800;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=LDO49_RS24800;old_locus_tag=BCEP4_470020 NZ_CAJZAV010000254.1 Protein Homology CDS 14953 16176 . - 0 ID=cds-WP_059855257.1;Parent=gene-LDO49_RS24800;Dbxref=GenBank:WP_059855257.1;Name=WP_059855257.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189719.1;locus_tag=LDO49_RS24800;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_059855257.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 16194 16748 . + . ID=gene-LDO49_RS24805;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=LDO49_RS24805;old_locus_tag=BCEP4_470022 NZ_CAJZAV010000254.1 Protein Homology CDS 16194 16748 . + 0 ID=cds-WP_048024926.1;Parent=gene-LDO49_RS24805;Dbxref=GenBank:WP_048024926.1;Name=WP_048024926.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602338.1;locus_tag=LDO49_RS24805;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_048024926.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 16730 18256 . + . ID=gene-LDO49_RS24810;Name=LDO49_RS24810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24810;old_locus_tag=BCEP4_470021 NZ_CAJZAV010000254.1 Protein Homology CDS 16730 18256 . + 0 ID=cds-WP_224052462.1;Parent=gene-LDO49_RS24810;Dbxref=GenBank:WP_224052462.1;Name=WP_224052462.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885826.1;locus_tag=LDO49_RS24810;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_224052462.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 18329 19207 . - . ID=gene-LDO49_RS24815;Name=LDO49_RS24815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24815;old_locus_tag=BCEP4_470023 NZ_CAJZAV010000254.1 Protein Homology CDS 18329 19207 . - 0 ID=cds-WP_175849485.1;Parent=gene-LDO49_RS24815;Dbxref=GenBank:WP_175849485.1;Name=WP_175849485.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467684.1;locus_tag=LDO49_RS24815;product=EamA family transporter;protein_id=WP_175849485.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 19471 20352 . + . ID=gene-LDO49_RS24820;Name=LDO49_RS24820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24820;old_locus_tag=BCEP4_470024 NZ_CAJZAV010000254.1 Protein Homology CDS 19471 20352 . + 0 ID=cds-WP_224052463.1;Parent=gene-LDO49_RS24820;Dbxref=GenBank:WP_224052463.1;Name=WP_224052463.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329104.1;locus_tag=LDO49_RS24820;product=pirin family protein;protein_id=WP_224052463.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 20405 21253 . + . ID=gene-LDO49_RS24825;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LDO49_RS24825;old_locus_tag=BCEP4_470025 NZ_CAJZAV010000254.1 Protein Homology CDS 20405 21253 . + 0 ID=cds-WP_021162552.1;Parent=gene-LDO49_RS24825;Dbxref=GenBank:WP_021162552.1;Name=WP_021162552.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398476.1;locus_tag=LDO49_RS24825;product=thioredoxin;protein_id=WP_021162552.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 21368 22225 . - . ID=gene-LDO49_RS24830;Name=LDO49_RS24830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24830;old_locus_tag=BCEP4_470026 NZ_CAJZAV010000254.1 Protein Homology CDS 21368 22225 . - 0 ID=cds-WP_048024931.1;Parent=gene-LDO49_RS24830;Dbxref=GenBank:WP_048024931.1;Name=WP_048024931.1;Ontology_term=GO:0005524,GO:0008641,GO:0061503;gbkey=CDS;go_function=ATP binding|0005524||IEA,ubiquitin-like modifier activating enzyme activity|0008641||IEA,tRNA threonylcarbamoyladenosine dehydratase|0061503||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212828.1;locus_tag=LDO49_RS24830;product=tRNA threonylcarbamoyladenosine dehydratase;protein_id=WP_048024931.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 22354 22998 . + . ID=gene-LDO49_RS24835;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=LDO49_RS24835;old_locus_tag=BCEP4_470027 NZ_CAJZAV010000254.1 Protein Homology CDS 22354 22998 . + 0 ID=cds-WP_060069745.1;Parent=gene-LDO49_RS24835;Dbxref=GenBank:WP_060069745.1;Name=WP_060069745.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012399931.1;locus_tag=LDO49_RS24835;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_060069745.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 23120 24340 . + . ID=gene-LDO49_RS24840;Name=LDO49_RS24840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24840;old_locus_tag=BCEP4_470028 NZ_CAJZAV010000254.1 Protein Homology CDS 23120 24340 . + 0 ID=cds-WP_059709378.1;Parent=gene-LDO49_RS24840;Dbxref=GenBank:WP_059709378.1;Name=WP_059709378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602204.1;locus_tag=LDO49_RS24840;product=SAM-dependent methyltransferase;protein_id=WP_059709378.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 24364 25653 . + . ID=gene-LDO49_RS24845;Name=LDO49_RS24845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24845;old_locus_tag=BCEP4_470029 NZ_CAJZAV010000254.1 Protein Homology CDS 24364 25653 . + 0 ID=cds-WP_124475910.1;Parent=gene-LDO49_RS24845;Dbxref=GenBank:WP_124475910.1;Name=WP_124475910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496482.1;locus_tag=LDO49_RS24845;product=DUF72 domain-containing protein;protein_id=WP_124475910.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 25688 26248 . - . ID=gene-LDO49_RS24850;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=LDO49_RS24850;old_locus_tag=BCEP4_470030 NZ_CAJZAV010000254.1 Protein Homology CDS 25688 26248 . - 0 ID=cds-WP_041492935.1;Parent=gene-LDO49_RS24850;Dbxref=GenBank:WP_041492935.1;Name=WP_041492935.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546062.1;locus_tag=LDO49_RS24850;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_041492935.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 26828 28234 . + . ID=gene-LDO49_RS24855;Name=LDO49_RS24855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24855;old_locus_tag=BCEP4_470031 NZ_CAJZAV010000254.1 Protein Homology CDS 26828 28234 . + 0 ID=cds-WP_021162545.1;Parent=gene-LDO49_RS24855;Dbxref=GenBank:WP_021162545.1;Name=WP_021162545.1;Ontology_term=GO:0008430;gbkey=CDS;go_function=selenium binding|0008430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896218.1;locus_tag=LDO49_RS24855;product=selenium-binding protein SBP56-related protein;protein_id=WP_021162545.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 28231 28896 . + . ID=gene-LDO49_RS24860;Name=LDO49_RS24860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24860;old_locus_tag=BCEP4_470032 NZ_CAJZAV010000254.1 Protein Homology CDS 28231 28896 . + 0 ID=cds-WP_027789263.1;Parent=gene-LDO49_RS24860;Dbxref=GenBank:WP_027789263.1;Name=WP_027789263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477994.1;locus_tag=LDO49_RS24860;product=hypothetical protein;protein_id=WP_027789263.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 29202 29711 . + . ID=gene-LDO49_RS24865;Name=LDO49_RS24865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24865;old_locus_tag=BCEP4_470033 NZ_CAJZAV010000254.1 Protein Homology CDS 29202 29711 . + 0 ID=cds-WP_060069749.1;Parent=gene-LDO49_RS24865;Dbxref=GenBank:WP_060069749.1;Name=WP_060069749.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477993.1;locus_tag=LDO49_RS24865;product=flavin reductase family protein;protein_id=WP_060069749.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 29698 30198 . - . ID=gene-LDO49_RS24870;Name=LDO49_RS24870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24870;old_locus_tag=BCEP4_470034 NZ_CAJZAV010000254.1 Protein Homology CDS 29698 30198 . - 0 ID=cds-WP_006477992.1;Parent=gene-LDO49_RS24870;Dbxref=GenBank:WP_006477992.1;Name=WP_006477992.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009980145.1;locus_tag=LDO49_RS24870;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_006477992.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 30329 30970 . + . ID=gene-LDO49_RS24875;Name=kynB;gbkey=Gene;gene=kynB;gene_biotype=protein_coding;locus_tag=LDO49_RS24875;old_locus_tag=BCEP4_470035 NZ_CAJZAV010000254.1 Protein Homology CDS 30329 30970 . + 0 ID=cds-WP_048024942.1;Parent=gene-LDO49_RS24875;Dbxref=GenBank:WP_048024942.1;Name=WP_048024942.1;Ontology_term=GO:0019441,GO:0004061;gbkey=CDS;gene=kynB;go_function=arylformamidase activity|0004061||IEA;go_process=L-tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212823.1;locus_tag=LDO49_RS24875;product=arylformamidase;protein_id=WP_048024942.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 30995 32248 . + . ID=gene-LDO49_RS24880;Name=kynU;gbkey=Gene;gene=kynU;gene_biotype=protein_coding;locus_tag=LDO49_RS24880;old_locus_tag=BCEP4_470036 NZ_CAJZAV010000254.1 Protein Homology CDS 30995 32248 . + 0 ID=cds-WP_021162541.1;Parent=gene-LDO49_RS24880;Dbxref=GenBank:WP_021162541.1;Name=WP_021162541.1;Ontology_term=GO:0006569,GO:0009435,GO:0030170,GO:0030429,GO:0005737;gbkey=CDS;gene=kynU;go_component=cytoplasm|0005737||IEA;go_function=pyridoxal phosphate binding|0030170||IEA,kynureninase activity|0030429||IEA;go_process=L-tryptophan catabolic process|0006569||IEA,NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750965.1;locus_tag=LDO49_RS24880;product=kynureninase;protein_id=WP_021162541.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 32338 33273 . + . ID=gene-LDO49_RS24885;Name=kynA;gbkey=Gene;gene=kynA;gene_biotype=protein_coding;locus_tag=LDO49_RS24885;old_locus_tag=BCEP4_470037 NZ_CAJZAV010000254.1 Protein Homology CDS 32338 33273 . + 0 ID=cds-WP_059497601.1;Parent=gene-LDO49_RS24885;Dbxref=GenBank:WP_059497601.1;Name=WP_059497601.1;Ontology_term=GO:0019441,GO:0004833;gbkey=CDS;gene=kynA;go_function=tryptophan 2%2C3-dioxygenase activity|0004833||IEA;go_process=L-tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482479.1;locus_tag=LDO49_RS24885;product=tryptophan 2%2C3-dioxygenase;protein_id=WP_059497601.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq pseudogene 33366 33608 . - . ID=gene-LDO49_RS24890;Name=LDO49_RS24890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS24890;partial=true;pseudo=true;start_range=.,33366 NZ_CAJZAV010000254.1 Protein Homology CDS 33366 33608 . - 0 ID=cds-LDO49_RS24890;Parent=gene-LDO49_RS24890;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004537934.1;locus_tag=LDO49_RS24890;partial=true;product=hypothetical protein;pseudo=true;start_range=.,33366;transl_table=11 NZ_CAJZAV010000254.1 RefSeq pseudogene 33568 33672 . + . ID=gene-LDO49_RS24895;Name=LDO49_RS24895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS24895;partial=true;pseudo=true;start_range=.,33568 NZ_CAJZAV010000254.1 Protein Homology CDS 33568 33672 . + 0 ID=cds-LDO49_RS24895;Parent=gene-LDO49_RS24895;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004550801.1;locus_tag=LDO49_RS24895;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,33568;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 33864 35288 . + . ID=gene-LDO49_RS24900;Name=dalD;gbkey=Gene;gene=dalD;gene_biotype=protein_coding;locus_tag=LDO49_RS24900;old_locus_tag=BCEP4_470038 NZ_CAJZAV010000254.1 Protein Homology CDS 33864 35288 . + 0 ID=cds-WP_060069753.1;Parent=gene-LDO49_RS24900;Dbxref=GenBank:WP_060069753.1;Name=WP_060069753.1;Ontology_term=GO:0051161,GO:0047813;gbkey=CDS;gene=dalD;go_function=D-arabinitol 4-dehydrogenase activity|0047813||IEA;go_process=arabitol metabolic process|0051161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492844.1;locus_tag=LDO49_RS24900;product=D-arabinitol 4-dehydrogenase;protein_id=WP_060069753.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 35372 36853 . + . ID=gene-LDO49_RS24905;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=LDO49_RS24905;old_locus_tag=BCEP4_470039 NZ_CAJZAV010000254.1 Protein Homology CDS 35372 36853 . + 0 ID=cds-WP_060069755.1;Parent=gene-LDO49_RS24905;Dbxref=GenBank:WP_060069755.1;Name=WP_060069755.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334025.1;locus_tag=LDO49_RS24905;product=xylulokinase;protein_id=WP_060069755.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 36919 37923 . + . ID=gene-LDO49_RS24910;Name=LDO49_RS24910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24910;old_locus_tag=BCEP4_470040 NZ_CAJZAV010000254.1 Protein Homology CDS 36919 37923 . + 0 ID=cds-WP_175849138.1;Parent=gene-LDO49_RS24910;Dbxref=GenBank:WP_175849138.1;Name=WP_175849138.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212813.1;locus_tag=LDO49_RS24910;product=sugar-binding transcriptional regulator;protein_id=WP_175849138.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 37999 38208 . - . ID=gene-LDO49_RS24915;Name=LDO49_RS24915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24915;old_locus_tag=BCEP4_470041 NZ_CAJZAV010000254.1 Protein Homology CDS 37999 38208 . - 0 ID=cds-WP_059497611.1;Parent=gene-LDO49_RS24915;Dbxref=GenBank:WP_059497611.1;Name=WP_059497611.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012422.6;locus_tag=LDO49_RS24915;product=helix-turn-helix domain-containing protein;protein_id=WP_059497611.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 38218 39429 . - . ID=gene-LDO49_RS24920;Name=LDO49_RS24920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24920;old_locus_tag=BCEP4_470042 NZ_CAJZAV010000254.1 Protein Homology CDS 38218 39429 . - 0 ID=cds-WP_060069757.1;Parent=gene-LDO49_RS24920;Dbxref=GenBank:WP_060069757.1;Name=WP_060069757.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009903208.1;locus_tag=LDO49_RS24920;product=MFS transporter;protein_id=WP_060069757.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 39426 40622 . - . ID=gene-LDO49_RS24925;Name=LDO49_RS24925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24925;old_locus_tag=BCEP4_470043 NZ_CAJZAV010000254.1 Protein Homology CDS 39426 40622 . - 0 ID=cds-WP_060069759.1;Parent=gene-LDO49_RS24925;Dbxref=GenBank:WP_060069759.1;Name=WP_060069759.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546077.1;locus_tag=LDO49_RS24925;product=serine hydrolase domain-containing protein;protein_id=WP_060069759.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 40737 41621 . + . ID=gene-LDO49_RS24930;Name=LDO49_RS24930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24930;old_locus_tag=BCEP4_470044 NZ_CAJZAV010000254.1 Protein Homology CDS 40737 41621 . + 0 ID=cds-WP_021159534.1;Parent=gene-LDO49_RS24930;Dbxref=GenBank:WP_021159534.1;Name=WP_021159534.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657782.1;locus_tag=LDO49_RS24930;product=LysR family transcriptional regulator;protein_id=WP_021159534.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 41635 42744 . - . ID=gene-LDO49_RS24935;Name=LDO49_RS24935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24935;old_locus_tag=BCEP4_470045 NZ_CAJZAV010000254.1 Protein Homology CDS 41635 42744 . - 0 ID=cds-WP_021159533.1;Parent=gene-LDO49_RS24935;Dbxref=GenBank:WP_021159533.1;Name=WP_021159533.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885872.1;locus_tag=LDO49_RS24935;product=ABC transporter ATP-binding protein;protein_id=WP_021159533.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 42814 43497 . - . ID=gene-LDO49_RS24940;Name=LDO49_RS24940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24940;old_locus_tag=BCEP4_470046 NZ_CAJZAV010000254.1 Protein Homology CDS 42814 43497 . - 0 ID=cds-WP_224052464.1;Parent=gene-LDO49_RS24940;Dbxref=GenBank:WP_224052464.1;Name=WP_224052464.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353033.1;locus_tag=LDO49_RS24940;product=HAD family hydrolase;protein_id=WP_224052464.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 43494 44345 . - . ID=gene-LDO49_RS24945;Name=LDO49_RS24945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24945;old_locus_tag=BCEP4_470047 NZ_CAJZAV010000254.1 Protein Homology CDS 43494 44345 . - 0 ID=cds-WP_027789251.1;Parent=gene-LDO49_RS24945;Dbxref=GenBank:WP_027789251.1;Name=WP_027789251.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484674.1;locus_tag=LDO49_RS24945;product=carbohydrate ABC transporter permease;protein_id=WP_027789251.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 44342 45295 . - . ID=gene-LDO49_RS24950;Name=LDO49_RS24950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24950;old_locus_tag=BCEP4_470048 NZ_CAJZAV010000254.1 Protein Homology CDS 44342 45295 . - 0 ID=cds-WP_021159530.1;Parent=gene-LDO49_RS24950;Dbxref=GenBank:WP_021159530.1;Name=WP_021159530.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896200.1;locus_tag=LDO49_RS24950;product=carbohydrate ABC transporter permease;protein_id=WP_021159530.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 45410 46735 . - . ID=gene-LDO49_RS24955;Name=LDO49_RS24955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24955;old_locus_tag=BCEP4_470049 NZ_CAJZAV010000254.1 Protein Homology CDS 45410 46735 . - 0 ID=cds-WP_059554411.1;Parent=gene-LDO49_RS24955;Dbxref=GenBank:WP_059554411.1;Name=WP_059554411.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601633.1;locus_tag=LDO49_RS24955;product=ABC transporter substrate-binding protein;protein_id=WP_059554411.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 46783 48144 . - . ID=gene-LDO49_RS24960;Name=LDO49_RS24960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24960;old_locus_tag=BCEP4_470050 NZ_CAJZAV010000254.1 Protein Homology CDS 46783 48144 . - 0 ID=cds-WP_224052465.1;Parent=gene-LDO49_RS24960;Dbxref=GenBank:WP_224052465.1;Name=WP_224052465.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353037.1;locus_tag=LDO49_RS24960;product=D-tagatose-bisphosphate aldolase%2C class II%2C non-catalytic subunit;protein_id=WP_224052465.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 48132 49088 . - . ID=gene-LDO49_RS24965;Name=LDO49_RS24965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24965;old_locus_tag=BCEP4_470051 NZ_CAJZAV010000254.1 Protein Homology CDS 48132 49088 . - 0 ID=cds-WP_059623864.1;Parent=gene-LDO49_RS24965;Dbxref=GenBank:WP_059623864.1;Name=WP_059623864.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522660.1;locus_tag=LDO49_RS24965;product=sugar kinase;protein_id=WP_059623864.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 49185 49961 . - . ID=gene-LDO49_RS24970;Name=LDO49_RS24970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24970;old_locus_tag=BCEP4_470052 NZ_CAJZAV010000254.1 Protein Homology CDS 49185 49961 . - 0 ID=cds-WP_059497627.1;Parent=gene-LDO49_RS24970;Dbxref=GenBank:WP_059497627.1;Name=WP_059497627.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876870.1;locus_tag=LDO49_RS24970;product=L-iditol 2-dehydrogenase;protein_id=WP_059497627.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 50291 50752 . + . ID=gene-LDO49_RS24975;Name=LDO49_RS24975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24975;old_locus_tag=BCEP4_470053 NZ_CAJZAV010000254.1 Protein Homology CDS 50291 50752 . + 0 ID=cds-WP_011546084.1;Parent=gene-LDO49_RS24975;Dbxref=GenBank:WP_011546084.1;Name=WP_011546084.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896195.1;locus_tag=LDO49_RS24975;product=Fur family transcriptional regulator;protein_id=WP_011546084.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 50799 51722 . + . ID=gene-LDO49_RS24980;Name=LDO49_RS24980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24980;old_locus_tag=BCEP4_470054 NZ_CAJZAV010000254.1 Protein Homology CDS 50799 51722 . + 0 ID=cds-WP_048024967.1;Parent=gene-LDO49_RS24980;Dbxref=GenBank:WP_048024967.1;Name=WP_048024967.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754783.1;locus_tag=LDO49_RS24980;product=metal ABC transporter solute-binding protein%2C Zn/Mn family;protein_id=WP_048024967.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 51737 52627 . + . ID=gene-LDO49_RS24985;Name=LDO49_RS24985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24985;old_locus_tag=BCEP4_470055 NZ_CAJZAV010000254.1 Protein Homology CDS 51737 52627 . + 0 ID=cds-WP_059816222.1;Parent=gene-LDO49_RS24985;Dbxref=GenBank:WP_059816222.1;Name=WP_059816222.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410050.1;locus_tag=LDO49_RS24985;product=ABC transporter ATP-binding protein;protein_id=WP_059816222.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 52620 53402 . + . ID=gene-LDO49_RS24990;Name=LDO49_RS24990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS24990;old_locus_tag=BCEP4_470056 NZ_CAJZAV010000254.1 Protein Homology CDS 52620 53402 . + 0 ID=cds-WP_027789245.1;Parent=gene-LDO49_RS24990;Dbxref=GenBank:WP_027789245.1;Name=WP_027789245.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329133.1;locus_tag=LDO49_RS24990;product=metal ABC transporter permease;protein_id=WP_027789245.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 53546 54394 . - . ID=gene-LDO49_RS24995;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=LDO49_RS24995;old_locus_tag=BCEP4_470057 NZ_CAJZAV010000254.1 Protein Homology CDS 53546 54394 . - 0 ID=cds-WP_021159522.1;Parent=gene-LDO49_RS24995;Dbxref=GenBank:WP_021159522.1;Name=WP_021159522.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896191.1;locus_tag=LDO49_RS24995;product=S-formylglutathione hydrolase;protein_id=WP_021159522.1;transl_table=11 NZ_CAJZAV010000254.1 RefSeq gene 54411 55517 . - . ID=gene-LDO49_RS25000;Name=LDO49_RS25000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25000;old_locus_tag=BCEP4_470058 NZ_CAJZAV010000254.1 Protein Homology CDS 54411 55517 . - 0 ID=cds-WP_006483756.1;Parent=gene-LDO49_RS25000;Dbxref=GenBank:WP_006483756.1;Name=WP_006483756.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019451408.1;locus_tag=LDO49_RS25000;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_006483756.1;transl_table=11 ##sequence-region NZ_CAJZAV010000255.1 1 72282 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000255.1 RefSeq region 1 72282 . + . ID=NZ_CAJZAV010000255.1:1..72282;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_48 NZ_CAJZAV010000255.1 RefSeq gene 155 1288 . - . ID=gene-LDO49_RS25005;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=LDO49_RS25005;old_locus_tag=BCEP4_480002 NZ_CAJZAV010000255.1 Protein Homology CDS 155 1288 . - 0 ID=cds-WP_021160401.1;Parent=gene-LDO49_RS25005;Dbxref=GenBank:WP_021160401.1;Name=WP_021160401.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327583.1;locus_tag=LDO49_RS25005;product=type II secretion system minor pseudopilin GspK;protein_id=WP_021160401.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 1291 1980 . - . ID=gene-LDO49_RS25010;Name=LDO49_RS25010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25010;old_locus_tag=BCEP4_480003 NZ_CAJZAV010000255.1 Protein Homology CDS 1291 1980 . - 0 ID=cds-WP_081057200.1;Parent=gene-LDO49_RS25010;Dbxref=GenBank:WP_081057200.1;Name=WP_081057200.1;Ontology_term=GO:0015628,GO:0005886,GO:0015627;gbkey=CDS;go_component=plasma membrane|0005886||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185018.1;locus_tag=LDO49_RS25010;product=PulJ/GspJ family protein;protein_id=WP_081057200.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 1958 2392 . - . ID=gene-LDO49_RS25015;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=LDO49_RS25015;old_locus_tag=BCEP4_480004 NZ_CAJZAV010000255.1 Protein Homology CDS 1958 2392 . - 0 ID=cds-WP_042975635.1;Parent=gene-LDO49_RS25015;Dbxref=GenBank:WP_042975635.1;Name=WP_042975635.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524538.1;locus_tag=LDO49_RS25015;product=type II secretion system minor pseudopilin GspI;protein_id=WP_042975635.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 2395 2964 . - . ID=gene-LDO49_RS25020;Name=LDO49_RS25020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25020;old_locus_tag=BCEP4_480005 NZ_CAJZAV010000255.1 Protein Homology CDS 2395 2964 . - 0 ID=cds-WP_224052466.1;Parent=gene-LDO49_RS25020;Dbxref=GenBank:WP_224052466.1;Name=WP_224052466.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491630.1;locus_tag=LDO49_RS25020;product=GspH/FimT family pseudopilin;protein_id=WP_224052466.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 3004 3456 . - . ID=gene-LDO49_RS25025;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=LDO49_RS25025;old_locus_tag=BCEP4_480006 NZ_CAJZAV010000255.1 Protein Homology CDS 3004 3456 . - 0 ID=cds-WP_011350483.1;Parent=gene-LDO49_RS25025;Dbxref=GenBank:WP_011350483.1;Name=WP_011350483.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751354.1;locus_tag=LDO49_RS25025;product=type II secretion system major pseudopilin GspG;protein_id=WP_011350483.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 3632 4042 . + . ID=gene-LDO49_RS25030;Name=LDO49_RS25030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25030;old_locus_tag=BCEP4_480007 NZ_CAJZAV010000255.1 Protein Homology CDS 3632 4042 . + 0 ID=cds-WP_027788737.1;Parent=gene-LDO49_RS25030;Dbxref=GenBank:WP_027788737.1;Name=WP_027788737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910818.1;locus_tag=LDO49_RS25030;product=type II secretion system protein N;protein_id=WP_027788737.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 4073 5290 . - . ID=gene-LDO49_RS25035;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=LDO49_RS25035;old_locus_tag=BCEP4_480008 NZ_CAJZAV010000255.1 Protein Homology CDS 4073 5290 . - 0 ID=cds-WP_021160406.1;Parent=gene-LDO49_RS25035;Dbxref=GenBank:WP_021160406.1;Name=WP_021160406.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477248.1;locus_tag=LDO49_RS25035;product=type II secretion system inner membrane protein GspF;protein_id=WP_021160406.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 5295 6794 . - . ID=gene-LDO49_RS25040;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=LDO49_RS25040;old_locus_tag=BCEP4_480009 NZ_CAJZAV010000255.1 Protein Homology CDS 5295 6794 . - 0 ID=cds-WP_059490328.1;Parent=gene-LDO49_RS25040;Dbxref=GenBank:WP_059490328.1;Name=WP_059490328.1;Ontology_term=GO:0015628,GO:0005524,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_function=ATP binding|0005524||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490004.1;locus_tag=LDO49_RS25040;product=type II secretion system ATPase GspE;protein_id=WP_059490328.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 6791 9136 . - . ID=gene-LDO49_RS25045;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=LDO49_RS25045;old_locus_tag=BCEP4_480010 NZ_CAJZAV010000255.1 Protein Homology CDS 6791 9136 . - 0 ID=cds-WP_224052467.1;Parent=gene-LDO49_RS25045;Dbxref=GenBank:WP_224052467.1;Name=WP_224052467.1;Ontology_term=GO:0015628,GO:0015627,GO:0019867;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA,outer membrane|0019867||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544449.1;locus_tag=LDO49_RS25045;product=type II secretion system secretin GspD;protein_id=WP_224052467.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 9504 9953 . + . ID=gene-LDO49_RS25050;Name=LDO49_RS25050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25050;old_locus_tag=BCEP4_480011 NZ_CAJZAV010000255.1 Protein Homology CDS 9504 9953 . + 0 ID=cds-WP_021160409.1;Parent=gene-LDO49_RS25050;Dbxref=GenBank:WP_021160409.1;Name=WP_021160409.1;Ontology_term=GO:0000270,GO:0071555,GO:0008933;gbkey=CDS;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751349.1;locus_tag=LDO49_RS25050;product=lytic transglycosylase domain-containing protein;protein_id=WP_021160409.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 10113 11426 . + . ID=gene-LDO49_RS25055;Name=LDO49_RS25055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25055;old_locus_tag=BCEP4_480012 NZ_CAJZAV010000255.1 Protein Homology CDS 10113 11426 . + 0 ID=cds-WP_042975625.1;Parent=gene-LDO49_RS25055;Dbxref=GenBank:WP_042975625.1;Name=WP_042975625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362741.1;locus_tag=LDO49_RS25055;product=GTP-binding protein;protein_id=WP_042975625.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 11545 11823 . - . ID=gene-LDO49_RS25060;Name=LDO49_RS25060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25060;old_locus_tag=BCEP4_480013 NZ_CAJZAV010000255.1 Protein Homology CDS 11545 11823 . - 0 ID=cds-WP_006401505.1;Parent=gene-LDO49_RS25060;Dbxref=GenBank:WP_006401505.1;Name=WP_006401505.1;Ontology_term=GO:0030261,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008352404.1;locus_tag=LDO49_RS25060;product=HU family DNA-binding protein;protein_id=WP_006401505.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 12212 14182 . + . ID=gene-LDO49_RS25065;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=LDO49_RS25065;old_locus_tag=BCEP4_480014 NZ_CAJZAV010000255.1 Protein Homology CDS 12212 14182 . + 0 ID=cds-WP_059493850.1;Parent=gene-LDO49_RS25065;Dbxref=GenBank:WP_059493850.1;Name=WP_059493850.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694013.1;locus_tag=LDO49_RS25065;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_059493850.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 14854 16068 . + . ID=gene-LDO49_RS25070;Name=LDO49_RS25070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25070;old_locus_tag=BCEP4_480015 NZ_CAJZAV010000255.1 Protein Homology CDS 14854 16068 . + 0 ID=cds-WP_021160412.1;Parent=gene-LDO49_RS25070;Dbxref=GenBank:WP_021160412.1;Name=WP_021160412.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602304.1;locus_tag=LDO49_RS25070;product=cation:proton antiporter;protein_id=WP_021160412.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 16083 17198 . + . ID=gene-LDO49_RS25075;Name=LDO49_RS25075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25075;old_locus_tag=BCEP4_480016 NZ_CAJZAV010000255.1 Protein Homology CDS 16083 17198 . + 0 ID=cds-WP_021160413.1;Parent=gene-LDO49_RS25075;Dbxref=GenBank:WP_021160413.1;Name=WP_021160413.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334758.1;locus_tag=LDO49_RS25075;product=YbdK family carboxylate-amine ligase;protein_id=WP_021160413.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 17707 18345 . + . ID=gene-LDO49_RS25080;Name=LDO49_RS25080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25080;old_locus_tag=BCEP4_480017 NZ_CAJZAV010000255.1 Protein Homology CDS 17707 18345 . + 0 ID=cds-WP_027788730.1;Parent=gene-LDO49_RS25080;Dbxref=GenBank:WP_027788730.1;Name=WP_027788730.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408074.1;locus_tag=LDO49_RS25080;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_027788730.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 18374 19084 . + . ID=gene-LDO49_RS25085;Name=LDO49_RS25085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25085;old_locus_tag=BCEP4_480018 NZ_CAJZAV010000255.1 Protein Homology CDS 18374 19084 . + 0 ID=cds-WP_042975637.1;Parent=gene-LDO49_RS25085;Dbxref=GenBank:WP_042975637.1;Name=WP_042975637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601196.1;locus_tag=LDO49_RS25085;product=glutamine amidotransferase;protein_id=WP_042975637.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 19300 20412 . + . ID=gene-LDO49_RS25090;Name=LDO49_RS25090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25090;old_locus_tag=BCEP4_480019 NZ_CAJZAV010000255.1 Protein Homology CDS 19300 20412 . + 0 ID=cds-WP_060073564.1;Parent=gene-LDO49_RS25090;Dbxref=GenBank:WP_060073564.1;Name=WP_060073564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010093147.1;locus_tag=LDO49_RS25090;product=NADH:flavin oxidoreductase/NADH oxidase;protein_id=WP_060073564.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 20592 21122 . + . ID=gene-LDO49_RS25095;Name=LDO49_RS25095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25095;old_locus_tag=BCEP4_480020 NZ_CAJZAV010000255.1 Protein Homology CDS 20592 21122 . + 0 ID=cds-WP_042975626.1;Parent=gene-LDO49_RS25095;Dbxref=GenBank:WP_042975626.1;Name=WP_042975626.1;Ontology_term=GO:0005515,GO:0008168,GO:1904047;gbkey=CDS;go_function=protein binding|0005515||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362746.1;locus_tag=LDO49_RS25095;product=SET domain-containing protein;protein_id=WP_042975626.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 21257 22741 . - . ID=gene-LDO49_RS25100;Name=LDO49_RS25100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25100;old_locus_tag=BCEP4_480021 NZ_CAJZAV010000255.1 Protein Homology CDS 21257 22741 . - 0 ID=cds-WP_060048931.1;Parent=gene-LDO49_RS25100;Dbxref=GenBank:WP_060048931.1;Name=WP_060048931.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492237.1;locus_tag=LDO49_RS25100;product=sensor histidine kinase;protein_id=WP_060048931.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 22862 23554 . - . ID=gene-LDO49_RS25105;Name=LDO49_RS25105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25105;old_locus_tag=BCEP4_480022 NZ_CAJZAV010000255.1 Protein Homology CDS 22862 23554 . - 0 ID=cds-WP_006401494.1;Parent=gene-LDO49_RS25105;Dbxref=GenBank:WP_006401494.1;Name=WP_006401494.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401494.1;locus_tag=LDO49_RS25105;product=response regulator;protein_id=WP_006401494.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 23677 23907 . + . ID=gene-LDO49_RS25110;Name=LDO49_RS25110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25110;old_locus_tag=BCEP4_480023 NZ_CAJZAV010000255.1 Protein Homology CDS 23677 23907 . + 0 ID=cds-WP_021160419.1;Parent=gene-LDO49_RS25110;Dbxref=GenBank:WP_021160419.1;Name=WP_021160419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401493.1;locus_tag=LDO49_RS25110;product=DUF3717 domain-containing protein;protein_id=WP_021160419.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 24000 24377 . - . ID=gene-LDO49_RS25115;Name=LDO49_RS25115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25115;old_locus_tag=BCEP4_480024 NZ_CAJZAV010000255.1 Protein Homology CDS 24000 24377 . - 0 ID=cds-WP_255221837.1;Parent=gene-LDO49_RS25115;Dbxref=GenBank:WP_255221837.1;Name=WP_255221837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546818.1;locus_tag=LDO49_RS25115;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_255221837.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 24445 25338 . - . ID=gene-LDO49_RS25120;Name=phhA;gbkey=Gene;gene=phhA;gene_biotype=protein_coding;locus_tag=LDO49_RS25120;old_locus_tag=BCEP4_480025 NZ_CAJZAV010000255.1 Protein Homology CDS 24445 25338 . - 0 ID=cds-WP_060073634.1;Parent=gene-LDO49_RS25120;Dbxref=GenBank:WP_060073634.1;Name=WP_060073634.1;Ontology_term=GO:0006559,GO:0004505;gbkey=CDS;gene=phhA;go_function=phenylalanine 4-monooxygenase activity|0004505||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492238.1;locus_tag=LDO49_RS25120;product=phenylalanine 4-monooxygenase;protein_id=WP_060073634.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 25478 25963 . + . ID=gene-LDO49_RS25125;Name=LDO49_RS25125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25125;old_locus_tag=BCEP4_480026 NZ_CAJZAV010000255.1 Protein Homology CDS 25478 25963 . + 0 ID=cds-WP_006408082.1;Parent=gene-LDO49_RS25125;Dbxref=GenBank:WP_006408082.1;Name=WP_006408082.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010093131.1;locus_tag=LDO49_RS25125;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_006408082.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 26035 26568 . - . ID=gene-LDO49_RS25130;Name=LDO49_RS25130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25130;old_locus_tag=BCEP4_480027 NZ_CAJZAV010000255.1 Protein Homology CDS 26035 26568 . - 0 ID=cds-WP_048023987.1;Parent=gene-LDO49_RS25130;Dbxref=GenBank:WP_048023987.1;Name=WP_048023987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546816.1;locus_tag=LDO49_RS25130;product=class IV adenylate cyclase;protein_id=WP_048023987.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 26739 27638 . - . ID=gene-LDO49_RS25135;Name=LDO49_RS25135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25135;old_locus_tag=BCEP4_480029 NZ_CAJZAV010000255.1 Protein Homology CDS 26739 27638 . - 0 ID=cds-WP_042975630.1;Parent=gene-LDO49_RS25135;Dbxref=GenBank:WP_042975630.1;Name=WP_042975630.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004556010.1;locus_tag=LDO49_RS25135;product=LysR family transcriptional regulator;protein_id=WP_042975630.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 27822 29507 . + . ID=gene-LDO49_RS25140;Name=LDO49_RS25140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25140;old_locus_tag=BCEP4_480028 NZ_CAJZAV010000255.1 Protein Homology CDS 27822 29507 . + 0 ID=cds-WP_059591567.1;Parent=gene-LDO49_RS25140;Dbxref=GenBank:WP_059591567.1;Name=WP_059591567.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751333.1;locus_tag=LDO49_RS25140;product=GMC family oxidoreductase;protein_id=WP_059591567.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 29954 30733 . + . ID=gene-LDO49_RS25145;Name=LDO49_RS25145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25145;old_locus_tag=BCEP4_480031 NZ_CAJZAV010000255.1 Protein Homology CDS 29954 30733 . + 0 ID=cds-WP_021160426.1;Parent=gene-LDO49_RS25145;Dbxref=GenBank:WP_021160426.1;Name=WP_021160426.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008917939.1;locus_tag=LDO49_RS25145;product=ABC transporter ATP-binding protein;protein_id=WP_021160426.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 30730 31485 . + . ID=gene-LDO49_RS25150;Name=LDO49_RS25150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25150;old_locus_tag=BCEP4_480030 NZ_CAJZAV010000255.1 Protein Homology CDS 30730 31485 . + 0 ID=cds-WP_021160427.1;Parent=gene-LDO49_RS25150;Dbxref=GenBank:WP_021160427.1;Name=WP_021160427.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023954.1;locus_tag=LDO49_RS25150;product=ABC transporter ATP-binding protein;protein_id=WP_021160427.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 31562 32761 . + . ID=gene-LDO49_RS25155;Name=LDO49_RS25155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25155;old_locus_tag=BCEP4_480032 NZ_CAJZAV010000255.1 Protein Homology CDS 31562 32761 . + 0 ID=cds-WP_060073565.1;Parent=gene-LDO49_RS25155;Dbxref=GenBank:WP_060073565.1;Name=WP_060073565.1;Ontology_term=GO:0055085,GO:0022857,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185183.1;locus_tag=LDO49_RS25155;product=ABC transporter substrate-binding protein;protein_id=WP_060073565.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 32892 33776 . + . ID=gene-LDO49_RS25160;Name=LDO49_RS25160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25160;old_locus_tag=BCEP4_480033 NZ_CAJZAV010000255.1 Protein Homology CDS 32892 33776 . + 0 ID=cds-WP_021160429.1;Parent=gene-LDO49_RS25160;Dbxref=GenBank:WP_021160429.1;Name=WP_021160429.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401481.1;locus_tag=LDO49_RS25160;product=branched-chain amino acid ABC transporter permease;protein_id=WP_021160429.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 33776 34750 . + . ID=gene-LDO49_RS25165;Name=LDO49_RS25165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25165;old_locus_tag=BCEP4_480034 NZ_CAJZAV010000255.1 Protein Homology CDS 33776 34750 . + 0 ID=cds-WP_059490387.1;Parent=gene-LDO49_RS25165;Dbxref=GenBank:WP_059490387.1;Name=WP_059490387.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600354.1;locus_tag=LDO49_RS25165;product=branched-chain amino acid ABC transporter permease;protein_id=WP_059490387.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 35879 37036 . + . ID=gene-LDO49_RS25170;Name=LDO49_RS25170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25170;old_locus_tag=BCEP4_480036 NZ_CAJZAV010000255.1 Protein Homology CDS 35879 37036 . + 0 ID=cds-WP_060073567.1;Parent=gene-LDO49_RS25170;Dbxref=GenBank:WP_060073567.1;Name=WP_060073567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762981.1;locus_tag=LDO49_RS25170;product=ABC transporter substrate-binding protein;protein_id=WP_060073567.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 37237 38292 . + . ID=gene-LDO49_RS25175;Name=LDO49_RS25175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25175;old_locus_tag=BCEP4_480037 NZ_CAJZAV010000255.1 Protein Homology CDS 37237 38292 . + 0 ID=cds-WP_224052468.1;Parent=gene-LDO49_RS25175;Dbxref=GenBank:WP_224052468.1;Name=WP_224052468.1;Ontology_term=GO:0015803,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401477.1;locus_tag=LDO49_RS25175;product=branched-chain amino acid ABC transporter permease;protein_id=WP_224052468.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 38297 40081 . + . ID=gene-LDO49_RS25180;Name=LDO49_RS25180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25180;old_locus_tag=BCEP4_480038 NZ_CAJZAV010000255.1 Protein Homology CDS 38297 40081 . + 0 ID=cds-WP_021160434.1;Parent=gene-LDO49_RS25180;Dbxref=GenBank:WP_021160434.1;Name=WP_021160434.1;Ontology_term=GO:0015803,GO:0005524,GO:0015658,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,branched-chain amino acid transmembrane transporter activity|0015658||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655609.1;locus_tag=LDO49_RS25180;product=branched-chain amino acid ABC transporter ATP-binding protein/permease;protein_id=WP_021160434.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 40081 40836 . + . ID=gene-LDO49_RS25185;Name=LDO49_RS25185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25185;old_locus_tag=BCEP4_480039 NZ_CAJZAV010000255.1 Protein Homology CDS 40081 40836 . + 0 ID=cds-WP_059490317.1;Parent=gene-LDO49_RS25185;Dbxref=GenBank:WP_059490317.1;Name=WP_059490317.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415001.1;locus_tag=LDO49_RS25185;product=ABC transporter ATP-binding protein;protein_id=WP_059490317.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 41415 43385 . + . ID=gene-LDO49_RS25190;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=LDO49_RS25190;old_locus_tag=BCEP4_480041 NZ_CAJZAV010000255.1 Protein Homology CDS 41415 43385 . + 0 ID=cds-WP_059553961.1;Parent=gene-LDO49_RS25190;Dbxref=GenBank:WP_059553961.1;Name=WP_059553961.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010093113.1;locus_tag=LDO49_RS25190;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_059553961.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 43382 44068 . + . ID=gene-LDO49_RS25195;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=LDO49_RS25195;old_locus_tag=BCEP4_480042 NZ_CAJZAV010000255.1 Protein Homology CDS 43382 44068 . + 0 ID=cds-WP_224052469.1;Parent=gene-LDO49_RS25195;Dbxref=GenBank:WP_224052469.1;Name=WP_224052469.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477276.1;locus_tag=LDO49_RS25195;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_224052469.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 44125 44904 . + . ID=gene-LDO49_RS25200;Name=LDO49_RS25200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25200;old_locus_tag=BCEP4_480043 NZ_CAJZAV010000255.1 Protein Homology CDS 44125 44904 . + 0 ID=cds-WP_042975632.1;Parent=gene-LDO49_RS25200;Dbxref=GenBank:WP_042975632.1;Name=WP_042975632.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895493.1;locus_tag=LDO49_RS25200;product=ParA family protein;protein_id=WP_042975632.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 44936 45829 . + . ID=gene-LDO49_RS25205;Name=LDO49_RS25205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25205;old_locus_tag=BCEP4_480044 NZ_CAJZAV010000255.1 Protein Homology CDS 44936 45829 . + 0 ID=cds-WP_021160439.1;Parent=gene-LDO49_RS25205;Dbxref=GenBank:WP_021160439.1;Name=WP_021160439.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895494.1;locus_tag=LDO49_RS25205;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_021160439.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 45840 46970 . + . ID=gene-LDO49_RS25210;Name=LDO49_RS25210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25210;old_locus_tag=BCEP4_480045 NZ_CAJZAV010000255.1 Protein Homology CDS 45840 46970 . + 0 ID=cds-WP_224052470.1;Parent=gene-LDO49_RS25210;Dbxref=GenBank:WP_224052470.1;Name=WP_224052470.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496314.1;locus_tag=LDO49_RS25210;product=SLC13 family permease;protein_id=WP_224052470.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 47540 48064 . + . ID=gene-LDO49_RS25215;Name=LDO49_RS25215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25215;old_locus_tag=BCEP4_480048 NZ_CAJZAV010000255.1 Protein Homology CDS 47540 48064 . + 0 ID=cds-WP_224052471.1;Parent=gene-LDO49_RS25215;Dbxref=GenBank:WP_224052471.1;Name=WP_224052471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401468.1;locus_tag=LDO49_RS25215;product=ATP synthase subunit I;protein_id=WP_224052471.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 48174 49025 . + . ID=gene-LDO49_RS25220;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=LDO49_RS25220;old_locus_tag=BCEP4_480049 NZ_CAJZAV010000255.1 Protein Homology CDS 48174 49025 . + 0 ID=cds-WP_012492242.1;Parent=gene-LDO49_RS25220;Dbxref=GenBank:WP_012492242.1;Name=WP_012492242.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011204192.1;locus_tag=LDO49_RS25220;product=F0F1 ATP synthase subunit A;protein_id=WP_012492242.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 49101 49373 . + . ID=gene-LDO49_RS25225;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=LDO49_RS25225;old_locus_tag=BCEP4_480050 NZ_CAJZAV010000255.1 Protein Homology CDS 49101 49373 . + 0 ID=cds-WP_021160442.1;Parent=gene-LDO49_RS25225;Dbxref=GenBank:WP_021160442.1;Name=WP_021160442.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334787.1;locus_tag=LDO49_RS25225;product=F0F1 ATP synthase subunit C;protein_id=WP_021160442.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 49503 49973 . + . ID=gene-LDO49_RS25230;Name=LDO49_RS25230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25230;old_locus_tag=BCEP4_480051 NZ_CAJZAV010000255.1 Protein Homology CDS 49503 49973 . + 0 ID=cds-WP_021160443.1;Parent=gene-LDO49_RS25230;Dbxref=GenBank:WP_021160443.1;Name=WP_021160443.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017772246.1;locus_tag=LDO49_RS25230;product=F0F1 ATP synthase subunit B;protein_id=WP_021160443.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 49976 50515 . + . ID=gene-LDO49_RS25235;Name=LDO49_RS25235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25235;old_locus_tag=BCEP4_480052 NZ_CAJZAV010000255.1 Protein Homology CDS 49976 50515 . + 0 ID=cds-WP_006482713.1;Parent=gene-LDO49_RS25235;Dbxref=GenBank:WP_006482713.1;Name=WP_006482713.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895498.1;locus_tag=LDO49_RS25235;product=F0F1 ATP synthase subunit delta;protein_id=WP_006482713.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 50560 52101 . + . ID=gene-LDO49_RS25240;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=LDO49_RS25240;old_locus_tag=BCEP4_480053 NZ_CAJZAV010000255.1 Protein Homology CDS 50560 52101 . + 0 ID=cds-WP_014895499.1;Parent=gene-LDO49_RS25240;Dbxref=GenBank:WP_014895499.1;Name=WP_014895499.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524507.1;locus_tag=LDO49_RS25240;product=F0F1 ATP synthase subunit alpha;protein_id=WP_014895499.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 52224 53099 . + . ID=gene-LDO49_RS25245;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=LDO49_RS25245;old_locus_tag=BCEP4_480054 NZ_CAJZAV010000255.1 Protein Homology CDS 52224 53099 . + 0 ID=cds-WP_034209645.1;Parent=gene-LDO49_RS25245;Dbxref=GenBank:WP_034209645.1;Name=WP_034209645.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195831.1;locus_tag=LDO49_RS25245;product=F0F1 ATP synthase subunit gamma;protein_id=WP_034209645.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 53166 54560 . + . ID=gene-LDO49_RS25250;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=LDO49_RS25250;old_locus_tag=BCEP4_480055 NZ_CAJZAV010000255.1 Protein Homology CDS 53166 54560 . + 0 ID=cds-WP_021160446.1;Parent=gene-LDO49_RS25250;Dbxref=GenBank:WP_021160446.1;Name=WP_021160446.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895501.1;locus_tag=LDO49_RS25250;product=F0F1 ATP synthase subunit beta;protein_id=WP_021160446.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 54714 55139 . + . ID=gene-LDO49_RS25255;Name=LDO49_RS25255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25255;old_locus_tag=BCEP4_480056 NZ_CAJZAV010000255.1 Protein Homology CDS 54714 55139 . + 0 ID=cds-WP_006477288.1;Parent=gene-LDO49_RS25255;Dbxref=GenBank:WP_006477288.1;Name=WP_006477288.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010107215.1;locus_tag=LDO49_RS25255;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_006477288.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 55393 57120 . + . ID=gene-LDO49_RS25260;Name=LDO49_RS25260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25260;old_locus_tag=BCEP4_480057 NZ_CAJZAV010000255.1 Protein Homology CDS 55393 57120 . + 0 ID=cds-WP_059816885.1;Parent=gene-LDO49_RS25260;Dbxref=GenBank:WP_059816885.1;Name=WP_059816885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895502.1;locus_tag=LDO49_RS25260;product=AMP-binding protein;protein_id=WP_059816885.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 57852 58652 . - . ID=gene-LDO49_RS25265;Name=LDO49_RS25265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25265;old_locus_tag=BCEP4_480058 NZ_CAJZAV010000255.1 Protein Homology CDS 57852 58652 . - 0 ID=cds-WP_027788707.1;Parent=gene-LDO49_RS25265;Dbxref=GenBank:WP_027788707.1;Name=WP_027788707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408102.1;locus_tag=LDO49_RS25265;product=transporter substrate-binding domain-containing protein;protein_id=WP_027788707.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 58802 59896 . + . ID=gene-LDO49_RS25270;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=LDO49_RS25270;old_locus_tag=BCEP4_480059 NZ_CAJZAV010000255.1 Protein Homology CDS 58802 59896 . + 0 ID=cds-WP_034195829.1;Parent=gene-LDO49_RS25270;Dbxref=GenBank:WP_034195829.1;Name=WP_034195829.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_043290608.1;locus_tag=LDO49_RS25270;product=uroporphyrinogen decarboxylase;protein_id=WP_034195829.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq pseudogene 60351 60894 . + . ID=gene-LDO49_RS37620;Name=LDO49_RS37620;end_range=60894,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37620;old_locus_tag=BCEP4_480060;partial=true;pseudo=true NZ_CAJZAV010000255.1 Protein Homology CDS 60351 60894 . + 0 ID=cds-LDO49_RS37620;Parent=gene-LDO49_RS37620;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=60894,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009522811.1;locus_tag=LDO49_RS37620;partial=true;product=primosomal protein N';pseudo=true;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 60905 62524 . + . ID=gene-LDO49_RS25275;Name=LDO49_RS25275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25275;old_locus_tag=BCEP4_480061;partial=true;start_range=.,60905 NZ_CAJZAV010000255.1 Protein Homology CDS 60905 62524 . + 0 ID=cds-WP_372585869.1;Parent=gene-LDO49_RS25275;Dbxref=GenBank:WP_372585869.1;Name=WP_372585869.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554653.1;locus_tag=LDO49_RS25275;partial=true;product=primosomal protein N';protein_id=WP_372585869.1;start_range=.,60905;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 63001 66933 . + . ID=gene-LDO49_RS25280;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=LDO49_RS25280;old_locus_tag=BCEP4_480062 NZ_CAJZAV010000255.1 Protein Homology CDS 63001 66933 . + 0 ID=cds-WP_048026158.1;Parent=gene-LDO49_RS25280;Dbxref=GenBank:WP_048026158.1;Name=WP_048026158.1;Ontology_term=GO:0006355,GO:0055129,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600251.1;locus_tag=LDO49_RS25280;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_048026158.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 67018 68157 . + . ID=gene-LDO49_RS25285;Name=LDO49_RS25285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25285;old_locus_tag=BCEP4_480063 NZ_CAJZAV010000255.1 Protein Homology CDS 67018 68157 . + 0 ID=cds-WP_027788703.1;Parent=gene-LDO49_RS25285;Dbxref=GenBank:WP_027788703.1;Name=WP_027788703.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734190.1;locus_tag=LDO49_RS25285;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_027788703.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 68364 68771 . - . ID=gene-LDO49_RS25290;Name=LDO49_RS25290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25290;old_locus_tag=BCEP4_480064 NZ_CAJZAV010000255.1 Protein Homology CDS 68364 68771 . - 0 ID=cds-WP_081067324.1;Parent=gene-LDO49_RS25290;Dbxref=GenBank:WP_081067324.1;Name=WP_081067324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546792.1;locus_tag=LDO49_RS25290;product=hypothetical protein;protein_id=WP_081067324.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 68764 69432 . - . ID=gene-LDO49_RS25295;Name=LDO49_RS25295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25295;old_locus_tag=BCEP4_480065 NZ_CAJZAV010000255.1 Protein Homology CDS 68764 69432 . - 0 ID=cds-WP_081067325.1;Parent=gene-LDO49_RS25295;Dbxref=GenBank:WP_081067325.1;Name=WP_081067325.1;Ontology_term=GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885585.1;locus_tag=LDO49_RS25295;product=M35 family metallo-endopeptidase;protein_id=WP_081067325.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 69437 69982 . - . ID=gene-LDO49_RS25300;Name=LDO49_RS25300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25300;old_locus_tag=BCEP4_480066 NZ_CAJZAV010000255.1 Protein Homology CDS 69437 69982 . - 0 ID=cds-WP_081057204.1;Parent=gene-LDO49_RS25300;Dbxref=GenBank:WP_081057204.1;Name=WP_081057204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749997.1;locus_tag=LDO49_RS25300;product=hypothetical protein;protein_id=WP_081057204.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 69993 70652 . - . ID=gene-LDO49_RS25305;Name=LDO49_RS25305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25305;old_locus_tag=BCEP4_480067 NZ_CAJZAV010000255.1 Protein Homology CDS 69993 70652 . - 0 ID=cds-WP_224052472.1;Parent=gene-LDO49_RS25305;Dbxref=GenBank:WP_224052472.1;Name=WP_224052472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749996.1;locus_tag=LDO49_RS25305;product=PAAR domain-containing protein;protein_id=WP_224052472.1;transl_table=11 NZ_CAJZAV010000255.1 RefSeq gene 70904 72282 . - . ID=gene-LDO49_RS25310;Name=LDO49_RS25310;end_range=72282,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25310;old_locus_tag=BCEP4_480069;partial=true NZ_CAJZAV010000255.1 Protein Homology CDS 70904 72282 . - 2 ID=cds-WP_224052473.1;Parent=gene-LDO49_RS25310;Dbxref=GenBank:WP_224052473.1;Name=WP_224052473.1;end_range=72282,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350534.1;locus_tag=LDO49_RS25310;partial=true;product=AMP-binding protein;protein_id=WP_224052473.1;transl_table=11 ##sequence-region NZ_CAJZAV010000256.1 1 154289 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000256.1 RefSeq region 1 154289 . + . ID=NZ_CAJZAV010000256.1:1..154289;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_49 NZ_CAJZAV010000256.1 RefSeq pseudogene 1 145 . - . ID=gene-LDO49_RS37435;Name=glcE;gbkey=Gene;gene=glcE;gene_biotype=pseudogene;locus_tag=LDO49_RS37435;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000256.1 Protein Homology CDS 1 145 . - 0 ID=cds-LDO49_RS37435;Parent=gene-LDO49_RS37435;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=glcE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353648.1;locus_tag=LDO49_RS37435;partial=true;product=glycolate oxidase subunit GlcE;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 145 1644 . - . ID=gene-LDO49_RS25315;Name=glcD;gbkey=Gene;gene=glcD;gene_biotype=protein_coding;locus_tag=LDO49_RS25315;old_locus_tag=BCEP4_490002 NZ_CAJZAV010000256.1 Protein Homology CDS 145 1644 . - 0 ID=cds-WP_060074534.1;Parent=gene-LDO49_RS25315;Dbxref=GenBank:WP_060074534.1;Name=WP_060074534.1;Ontology_term=GO:0003973,GO:0071949,GO:0009339;gbkey=CDS;gene=glcD;go_component=glycolate oxidase complex|0009339||IEA;go_function=(S)-2-hydroxy-acid oxidase activity|0003973||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900732.1;locus_tag=LDO49_RS25315;product=glycolate oxidase subunit GlcD;protein_id=WP_060074534.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 1877 2647 . + . ID=gene-LDO49_RS25320;Name=glcC;gbkey=Gene;gene=glcC;gene_biotype=protein_coding;locus_tag=LDO49_RS25320;old_locus_tag=BCEP4_490003 NZ_CAJZAV010000256.1 Protein Homology CDS 1877 2647 . + 0 ID=cds-WP_027790226.1;Parent=gene-LDO49_RS25320;Dbxref=GenBank:WP_027790226.1;Name=WP_027790226.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=glcC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483542.1;locus_tag=LDO49_RS25320;product=transcriptional regulator GlcC;protein_id=WP_027790226.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq pseudogene 2898 3329 . + . ID=gene-LDO49_RS25325;Name=LDO49_RS25325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS25325;old_locus_tag=BCEP4_490004;partial=true;pseudo=true;start_range=.,2898 NZ_CAJZAV010000256.1 Protein Homology CDS 2898 3329 . + 0 ID=cds-LDO49_RS25325;Parent=gene-LDO49_RS25325;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659876.1;locus_tag=LDO49_RS25325;partial=true;product=DUF6306 domain-containing protein;pseudo=true;start_range=.,2898;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 3503 5815 . - . ID=gene-LDO49_RS25330;Name=iteS;gbkey=Gene;gene=iteS;gene_biotype=protein_coding;locus_tag=LDO49_RS25330;old_locus_tag=BCEP4_490006 NZ_CAJZAV010000256.1 Protein Homology CDS 3503 5815 . - 0 ID=cds-WP_060147735.1;Parent=gene-LDO49_RS25330;Dbxref=GenBank:WP_060147735.1;Name=WP_060147735.1;Ontology_term=GO:0006508,GO:0051607,GO:0008236;gbkey=CDS;gene=iteS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA,defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013235415.1;locus_tag=LDO49_RS25330;product=S8 family anti-phage peptidase IteS;protein_id=WP_060147735.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 5763 6932 . - . ID=gene-LDO49_RS25335;Name=iteA;gbkey=Gene;gene=iteA;gene_biotype=protein_coding;locus_tag=LDO49_RS25335;old_locus_tag=BCEP4_490007 NZ_CAJZAV010000256.1 Protein Homology CDS 5763 6932 . - 0 ID=cds-WP_224052474.1;Parent=gene-LDO49_RS25335;Dbxref=GenBank:WP_224052474.1;Name=WP_224052474.1;Ontology_term=GO:0051607,GO:0005524,GO:0016887;gbkey=CDS;gene=iteA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012079593.1;locus_tag=LDO49_RS25335;product=anti-phage ATPase IteA;protein_id=WP_224052474.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 7109 7447 . + . ID=gene-LDO49_RS25340;Name=LDO49_RS25340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25340;old_locus_tag=BCEP4_490008 NZ_CAJZAV010000256.1 GeneMarkS-2+ CDS 7109 7447 . + 0 ID=cds-WP_124475210.1;Parent=gene-LDO49_RS25340;Dbxref=GenBank:WP_124475210.1;Name=WP_124475210.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS25340;product=hypothetical protein;protein_id=WP_124475210.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 7772 8623 . - . ID=gene-LDO49_RS25345;Name=LDO49_RS25345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25345;old_locus_tag=BCEP4_490009 NZ_CAJZAV010000256.1 Protein Homology CDS 7772 8623 . - 0 ID=cds-WP_027790229.1;Parent=gene-LDO49_RS25345;Dbxref=GenBank:WP_027790229.1;Name=WP_027790229.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024176.1;locus_tag=LDO49_RS25345;product=carbohydrate ABC transporter permease;protein_id=WP_027790229.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 8645 9613 . - . ID=gene-LDO49_RS25350;Name=LDO49_RS25350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25350;old_locus_tag=BCEP4_490010 NZ_CAJZAV010000256.1 Protein Homology CDS 8645 9613 . - 0 ID=cds-WP_021163540.1;Parent=gene-LDO49_RS25350;Dbxref=GenBank:WP_021163540.1;Name=WP_021163540.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339092.1;locus_tag=LDO49_RS25350;product=carbohydrate ABC transporter permease;protein_id=WP_021163540.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 9684 10943 . - . ID=gene-LDO49_RS25355;Name=LDO49_RS25355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25355;old_locus_tag=BCEP4_490011 NZ_CAJZAV010000256.1 Protein Homology CDS 9684 10943 . - 0 ID=cds-WP_060224909.1;Parent=gene-LDO49_RS25355;Dbxref=GenBank:WP_060224909.1;Name=WP_060224909.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413331.1;locus_tag=LDO49_RS25355;product=ABC transporter substrate-binding protein;protein_id=WP_060224909.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 11010 13001 . - . ID=gene-LDO49_RS25360;Name=LDO49_RS25360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25360;old_locus_tag=BCEP4_490012 NZ_CAJZAV010000256.1 Protein Homology CDS 11010 13001 . - 0 ID=cds-WP_224052475.1;Parent=gene-LDO49_RS25360;Dbxref=GenBank:WP_224052475.1;Name=WP_224052475.1;Ontology_term=GO:0006012,GO:0004565,GO:0046872,GO:0009341;gbkey=CDS;go_component=beta-galactosidase complex|0009341||IEA;go_function=beta-galactosidase activity|0004565||IEA,metal ion binding|0046872||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367133.1;locus_tag=LDO49_RS25360;product=beta-galactosidase;protein_id=WP_224052475.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 13011 14159 . - . ID=gene-LDO49_RS25365;Name=LDO49_RS25365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25365;old_locus_tag=BCEP4_490013 NZ_CAJZAV010000256.1 Protein Homology CDS 13011 14159 . - 0 ID=cds-WP_059495248.1;Parent=gene-LDO49_RS25365;Dbxref=GenBank:WP_059495248.1;Name=WP_059495248.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659870.1;locus_tag=LDO49_RS25365;product=ABC transporter ATP-binding protein;protein_id=WP_059495248.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 14349 15389 . + . ID=gene-LDO49_RS25370;Name=LDO49_RS25370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25370;old_locus_tag=BCEP4_490014 NZ_CAJZAV010000256.1 Protein Homology CDS 14349 15389 . + 0 ID=cds-WP_224052476.1;Parent=gene-LDO49_RS25370;Dbxref=GenBank:WP_224052476.1;Name=WP_224052476.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548788.1;locus_tag=LDO49_RS25370;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_224052476.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 15553 16194 . - . ID=gene-LDO49_RS25375;Name=LDO49_RS25375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25375;old_locus_tag=BCEP4_490015 NZ_CAJZAV010000256.1 Protein Homology CDS 15553 16194 . - 0 ID=cds-WP_224052477.1;Parent=gene-LDO49_RS25375;Dbxref=GenBank:WP_224052477.1;Name=WP_224052477.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900740.1;locus_tag=LDO49_RS25375;product=GntR family transcriptional regulator;protein_id=WP_224052477.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 16326 16802 . + . ID=gene-LDO49_RS25380;Name=LDO49_RS25380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25380;old_locus_tag=BCEP4_490016 NZ_CAJZAV010000256.1 Protein Homology CDS 16326 16802 . + 0 ID=cds-WP_059622168.1;Parent=gene-LDO49_RS25380;Dbxref=GenBank:WP_059622168.1;Name=WP_059622168.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750183.1;locus_tag=LDO49_RS25380;product=OsmC family protein;protein_id=WP_059622168.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 16831 17475 . + . ID=gene-LDO49_RS25385;Name=LDO49_RS25385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25385;old_locus_tag=BCEP4_490017 NZ_CAJZAV010000256.1 Protein Homology CDS 16831 17475 . + 0 ID=cds-WP_224052478.1;Parent=gene-LDO49_RS25385;Dbxref=GenBank:WP_224052478.1;Name=WP_224052478.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013899614.1;locus_tag=LDO49_RS25385;product=glutathione S-transferase family protein;protein_id=WP_224052478.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 17546 18496 . - . ID=gene-LDO49_RS25390;Name=LDO49_RS25390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25390;old_locus_tag=BCEP4_490018 NZ_CAJZAV010000256.1 Protein Homology CDS 17546 18496 . - 0 ID=cds-WP_224052479.1;Parent=gene-LDO49_RS25390;Dbxref=GenBank:WP_224052479.1;Name=WP_224052479.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010098487.1;locus_tag=LDO49_RS25390;product=LysR family transcriptional regulator;protein_id=WP_224052479.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 18611 20362 . + . ID=gene-LDO49_RS25395;Name=LDO49_RS25395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25395;old_locus_tag=BCEP4_490019 NZ_CAJZAV010000256.1 Protein Homology CDS 18611 20362 . + 0 ID=cds-WP_027790240.1;Parent=gene-LDO49_RS25395;Dbxref=GenBank:WP_027790240.1;Name=WP_027790240.1;Ontology_term=GO:0016836,GO:0051536;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494293.1;locus_tag=LDO49_RS25395;product=IlvD/Edd family dehydratase;protein_id=WP_027790240.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 20491 21420 . + . ID=gene-LDO49_RS25400;Name=LDO49_RS25400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25400;old_locus_tag=BCEP4_490020 NZ_CAJZAV010000256.1 Protein Homology CDS 20491 21420 . + 0 ID=cds-WP_042978002.1;Parent=gene-LDO49_RS25400;Dbxref=GenBank:WP_042978002.1;Name=WP_042978002.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881176.1;locus_tag=LDO49_RS25400;product=dihydrodipicolinate synthase family protein;protein_id=WP_042978002.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 21457 22386 . + . ID=gene-LDO49_RS25405;Name=LDO49_RS25405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25405;old_locus_tag=BCEP4_490021 NZ_CAJZAV010000256.1 Protein Homology CDS 21457 22386 . + 0 ID=cds-WP_021163528.1;Parent=gene-LDO49_RS25405;Dbxref=GenBank:WP_021163528.1;Name=WP_021163528.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750188.1;locus_tag=LDO49_RS25405;product=Gfo/Idh/MocA family protein;protein_id=WP_021163528.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 22479 23492 . + . ID=gene-LDO49_RS25410;Name=LDO49_RS25410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25410;old_locus_tag=BCEP4_490022 NZ_CAJZAV010000256.1 Protein Homology CDS 22479 23492 . + 0 ID=cds-WP_048023717.1;Parent=gene-LDO49_RS25410;Dbxref=GenBank:WP_048023717.1;Name=WP_048023717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758832.1;locus_tag=LDO49_RS25410;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_048023717.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 23513 25099 . + . ID=gene-LDO49_RS25415;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=LDO49_RS25415;old_locus_tag=BCEP4_490023 NZ_CAJZAV010000256.1 Protein Homology CDS 23513 25099 . + 0 ID=cds-WP_224052480.1;Parent=gene-LDO49_RS25415;Dbxref=GenBank:WP_224052480.1;Name=WP_224052480.1;Ontology_term=GO:0042882,GO:0005524,GO:0015612,GO:0016020;gbkey=CDS;gene=araG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type L-arabinose transporter activity|0015612||IEA;go_process=L-arabinose transmembrane transport|0042882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900748.1;locus_tag=LDO49_RS25415;product=L-arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_224052480.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 25130 26155 . + . ID=gene-LDO49_RS25420;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=LDO49_RS25420;old_locus_tag=BCEP4_490024 NZ_CAJZAV010000256.1 Protein Homology CDS 25130 26155 . + 0 ID=cds-WP_048023720.1;Parent=gene-LDO49_RS25420;Dbxref=GenBank:WP_048023720.1;Name=WP_048023720.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=araH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397496.1;locus_tag=LDO49_RS25420;product=L-arabinose ABC transporter permease AraH;protein_id=WP_048023720.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 26207 27106 . + . ID=gene-LDO49_RS25425;Name=LDO49_RS25425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25425;old_locus_tag=BCEP4_490025 NZ_CAJZAV010000256.1 Protein Homology CDS 26207 27106 . + 0 ID=cds-WP_124475207.1;Parent=gene-LDO49_RS25425;Dbxref=GenBank:WP_124475207.1;Name=WP_124475207.1;Ontology_term=GO:0005509,GO:0016787,GO:0046872;gbkey=CDS;go_function=calcium ion binding|0005509||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494298.1;locus_tag=LDO49_RS25425;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_124475207.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 27180 28070 . - . ID=gene-LDO49_RS25430;Name=LDO49_RS25430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25430;old_locus_tag=BCEP4_490026 NZ_CAJZAV010000256.1 Protein Homology CDS 27180 28070 . - 0 ID=cds-WP_059676673.1;Parent=gene-LDO49_RS25430;Dbxref=GenBank:WP_059676673.1;Name=WP_059676673.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017233225.1;locus_tag=LDO49_RS25430;product=amidohydrolase family protein;protein_id=WP_059676673.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 28240 29067 . + . ID=gene-LDO49_RS25435;Name=LDO49_RS25435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25435;old_locus_tag=BCEP4_490027 NZ_CAJZAV010000256.1 Protein Homology CDS 28240 29067 . + 0 ID=cds-WP_124475206.1;Parent=gene-LDO49_RS25435;Dbxref=GenBank:WP_124475206.1;Name=WP_124475206.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009933465.1;locus_tag=LDO49_RS25435;product=p-hydroxycinnamoyl CoA hydratase/lyase;protein_id=WP_124475206.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 29111 30562 . + . ID=gene-LDO49_RS25440;Name=LDO49_RS25440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25440;old_locus_tag=BCEP4_490028 NZ_CAJZAV010000256.1 Protein Homology CDS 29111 30562 . + 0 ID=cds-WP_124475205.1;Parent=gene-LDO49_RS25440;Dbxref=GenBank:WP_124475205.1;Name=WP_124475205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724289.1;locus_tag=LDO49_RS25440;product=aldehyde dehydrogenase;protein_id=WP_124475205.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 30664 32568 . + . ID=gene-LDO49_RS25445;Name=LDO49_RS25445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25445;old_locus_tag=BCEP4_490029 NZ_CAJZAV010000256.1 Protein Homology CDS 30664 32568 . + 0 ID=cds-WP_124475204.1;Parent=gene-LDO49_RS25445;Dbxref=GenBank:WP_124475204.1;Name=WP_124475204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724290.1;locus_tag=LDO49_RS25445;product=feruloyl-CoA synthase;protein_id=WP_124475204.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 32579 34330 . + . ID=gene-LDO49_RS25450;Name=LDO49_RS25450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25450;old_locus_tag=BCEP4_490030 NZ_CAJZAV010000256.1 Protein Homology CDS 32579 34330 . + 0 ID=cds-WP_124475203.1;Parent=gene-LDO49_RS25450;Dbxref=GenBank:WP_124475203.1;Name=WP_124475203.1;Ontology_term=GO:0006631,GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881186.1;locus_tag=LDO49_RS25450;product=acyl-CoA dehydrogenase;protein_id=WP_124475203.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 34502 34996 . + . ID=gene-LDO49_RS25455;Name=LDO49_RS25455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25455;old_locus_tag=BCEP4_490031 NZ_CAJZAV010000256.1 Protein Homology CDS 34502 34996 . + 0 ID=cds-WP_059487681.1;Parent=gene-LDO49_RS25455;Dbxref=GenBank:WP_059487681.1;Name=WP_059487681.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659857.1;locus_tag=LDO49_RS25455;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059487681.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 35273 36478 . + . ID=gene-LDO49_RS25460;Name=mhpT;gbkey=Gene;gene=mhpT;gene_biotype=protein_coding;locus_tag=LDO49_RS25460;old_locus_tag=BCEP4_490032 NZ_CAJZAV010000256.1 Protein Homology CDS 35273 36478 . + 0 ID=cds-WP_059651509.1;Parent=gene-LDO49_RS25460;Dbxref=GenBank:WP_059651509.1;Name=WP_059651509.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mhpT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548808.1;locus_tag=LDO49_RS25460;product=3-(3-hydroxy-phenyl)propionate transporter MhpT;protein_id=WP_059651509.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 36546 37685 . + . ID=gene-LDO49_RS25465;Name=LDO49_RS25465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25465;old_locus_tag=BCEP4_490033 NZ_CAJZAV010000256.1 Protein Homology CDS 36546 37685 . + 0 ID=cds-WP_021158633.1;Parent=gene-LDO49_RS25465;Dbxref=GenBank:WP_021158633.1;Name=WP_021158633.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397484.1;locus_tag=LDO49_RS25465;product=porin;protein_id=WP_021158633.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 37714 39438 . + . ID=gene-LDO49_RS25470;Name=LDO49_RS25470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25470;old_locus_tag=BCEP4_490034 NZ_CAJZAV010000256.1 Protein Homology CDS 37714 39438 . + 0 ID=cds-WP_059495232.1;Parent=gene-LDO49_RS25470;Dbxref=GenBank:WP_059495232.1;Name=WP_059495232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339108.1;locus_tag=LDO49_RS25470;product=tannase/feruloyl esterase family alpha/beta hydrolase;protein_id=WP_059495232.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 39524 40000 . - . ID=gene-LDO49_RS25475;Name=LDO49_RS25475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25475;old_locus_tag=BCEP4_490035 NZ_CAJZAV010000256.1 Protein Homology CDS 39524 40000 . - 0 ID=cds-WP_027790255.1;Parent=gene-LDO49_RS25475;Dbxref=GenBank:WP_027790255.1;Name=WP_027790255.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339109.1;locus_tag=LDO49_RS25475;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_027790255.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 40181 41413 . + . ID=gene-LDO49_RS25480;Name=LDO49_RS25480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25480;old_locus_tag=BCEP4_490036 NZ_CAJZAV010000256.1 Protein Homology CDS 40181 41413 . + 0 ID=cds-WP_060074517.1;Parent=gene-LDO49_RS25480;Dbxref=GenBank:WP_060074517.1;Name=WP_060074517.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485029.1;locus_tag=LDO49_RS25480;product=diaminopropionate ammonia-lyase;protein_id=WP_060074517.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 41463 42647 . + . ID=gene-LDO49_RS25485;Name=LDO49_RS25485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25485;old_locus_tag=BCEP4_490037 NZ_CAJZAV010000256.1 Protein Homology CDS 41463 42647 . + 0 ID=cds-WP_060074516.1;Parent=gene-LDO49_RS25485;Dbxref=GenBank:WP_060074516.1;Name=WP_060074516.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758428.1;locus_tag=LDO49_RS25485;product=M20 aminoacylase family protein;protein_id=WP_060074516.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 42669 43382 . - . ID=gene-LDO49_RS25490;Name=LDO49_RS25490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25490;old_locus_tag=BCEP4_490038 NZ_CAJZAV010000256.1 Protein Homology CDS 42669 43382 . - 0 ID=cds-WP_042974167.1;Parent=gene-LDO49_RS25490;Dbxref=GenBank:WP_042974167.1;Name=WP_042974167.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900767.1;locus_tag=LDO49_RS25490;product=GntR family transcriptional regulator;protein_id=WP_042974167.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 43555 44853 . + . ID=gene-LDO49_RS25495;Name=LDO49_RS25495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25495;old_locus_tag=BCEP4_490039 NZ_CAJZAV010000256.1 Protein Homology CDS 43555 44853 . + 0 ID=cds-WP_021158639.1;Parent=gene-LDO49_RS25495;Dbxref=GenBank:WP_021158639.1;Name=WP_021158639.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900768.1;locus_tag=LDO49_RS25495;product=MFS transporter;protein_id=WP_021158639.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 44905 45633 . + . ID=gene-LDO49_RS25500;Name=LDO49_RS25500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25500;old_locus_tag=BCEP4_490040 NZ_CAJZAV010000256.1 Protein Homology CDS 44905 45633 . + 0 ID=cds-WP_060074515.1;Parent=gene-LDO49_RS25500;Dbxref=GenBank:WP_060074515.1;Name=WP_060074515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900769.1;locus_tag=LDO49_RS25500;product=maleate cis-trans isomerase family protein;protein_id=WP_060074515.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 45644 47056 . + . ID=gene-LDO49_RS25505;Name=hydA;gbkey=Gene;gene=hydA;gene_biotype=protein_coding;locus_tag=LDO49_RS25505;old_locus_tag=BCEP4_490041 NZ_CAJZAV010000256.1 Protein Homology CDS 45644 47056 . + 0 ID=cds-WP_059487674.1;Parent=gene-LDO49_RS25505;Dbxref=GenBank:WP_059487674.1;Name=WP_059487674.1;Ontology_term=GO:0008152,GO:0004157,GO:0005737;gbkey=CDS;gene=hydA;go_component=cytoplasm|0005737||IEA;go_function=dihydropyrimidinase activity|0004157||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900770.1;locus_tag=LDO49_RS25505;product=dihydropyrimidinase;protein_id=WP_059487674.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 47115 48308 . + . ID=gene-LDO49_RS25510;Name=LDO49_RS25510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25510;old_locus_tag=BCEP4_490042 NZ_CAJZAV010000256.1 Protein Homology CDS 47115 48308 . + 0 ID=cds-WP_060074514.1;Parent=gene-LDO49_RS25510;Dbxref=GenBank:WP_060074514.1;Name=WP_060074514.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900771.1;locus_tag=LDO49_RS25510;product=serine hydrolase domain-containing protein;protein_id=WP_060074514.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 48386 49603 . + . ID=gene-LDO49_RS25515;Name=LDO49_RS25515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25515;old_locus_tag=BCEP4_490043 NZ_CAJZAV010000256.1 Protein Homology CDS 48386 49603 . + 0 ID=cds-WP_060074555.1;Parent=gene-LDO49_RS25515;Dbxref=GenBank:WP_060074555.1;Name=WP_060074555.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013955166.1;locus_tag=LDO49_RS25515;product=serine hydrolase domain-containing protein;protein_id=WP_060074555.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 49736 51094 . - . ID=gene-LDO49_RS25520;Name=LDO49_RS25520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25520;old_locus_tag=BCEP4_490044 NZ_CAJZAV010000256.1 Protein Homology CDS 49736 51094 . - 0 ID=cds-WP_060074513.1;Parent=gene-LDO49_RS25520;Dbxref=GenBank:WP_060074513.1;Name=WP_060074513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553920.1;locus_tag=LDO49_RS25520;product=aspartate aminotransferase family protein;protein_id=WP_060074513.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 51222 51581 . + . ID=gene-LDO49_RS25525;Name=LDO49_RS25525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25525;old_locus_tag=BCEP4_490045 NZ_CAJZAV010000256.1 GeneMarkS-2+ CDS 51222 51581 . + 0 ID=cds-WP_060074512.1;Parent=gene-LDO49_RS25525;Dbxref=GenBank:WP_060074512.1;Name=WP_060074512.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS25525;product=hypothetical protein;protein_id=WP_060074512.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq pseudogene 51755 51974 . + . ID=gene-LDO49_RS25530;Name=LDO49_RS25530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS25530;partial=true;pseudo=true;start_range=.,51755 NZ_CAJZAV010000256.1 Protein Homology CDS 51755 51974 . + 0 ID=cds-LDO49_RS25530;Parent=gene-LDO49_RS25530;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485020.1;locus_tag=LDO49_RS25530;partial=true;product=endopolygalacturonase;pseudo=true;start_range=.,51755;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 52041 52550 . - . ID=gene-LDO49_RS25535;Name=LDO49_RS25535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25535;old_locus_tag=BCEP4_490047 NZ_CAJZAV010000256.1 Protein Homology CDS 52041 52550 . - 0 ID=cds-WP_060074511.1;Parent=gene-LDO49_RS25535;Dbxref=GenBank:WP_060074511.1;Name=WP_060074511.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485055.1;locus_tag=LDO49_RS25535;product=GNAT family N-acetyltransferase;protein_id=WP_060074511.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 52715 53350 . - . ID=gene-LDO49_RS25540;Name=LDO49_RS25540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25540;old_locus_tag=BCEP4_490048 NZ_CAJZAV010000256.1 Protein Homology CDS 52715 53350 . - 0 ID=cds-WP_059651520.1;Parent=gene-LDO49_RS25540;Dbxref=GenBank:WP_059651520.1;Name=WP_059651520.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353677.1;locus_tag=LDO49_RS25540;product=helix-turn-helix domain-containing protein;protein_id=WP_059651520.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 53651 54004 . + . ID=gene-LDO49_RS25545;Name=LDO49_RS25545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25545;old_locus_tag=BCEP4_490049 NZ_CAJZAV010000256.1 Protein Homology CDS 53651 54004 . + 0 ID=cds-WP_042974203.1;Parent=gene-LDO49_RS25545;Dbxref=GenBank:WP_042974203.1;Name=WP_042974203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012404707.1;locus_tag=LDO49_RS25545;product=RidA family protein;protein_id=WP_042974203.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 54036 55286 . + . ID=gene-LDO49_RS25550;Name=LDO49_RS25550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25550;old_locus_tag=BCEP4_490050 NZ_CAJZAV010000256.1 Protein Homology CDS 54036 55286 . + 0 ID=cds-WP_060074510.1;Parent=gene-LDO49_RS25550;Dbxref=GenBank:WP_060074510.1;Name=WP_060074510.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353679.1;locus_tag=LDO49_RS25550;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_060074510.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 55393 56784 . + . ID=gene-LDO49_RS25555;Name=LDO49_RS25555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25555;old_locus_tag=BCEP4_490051 NZ_CAJZAV010000256.1 Protein Homology CDS 55393 56784 . + 0 ID=cds-WP_021158652.1;Parent=gene-LDO49_RS25555;Dbxref=GenBank:WP_021158652.1;Name=WP_021158652.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353680.1;locus_tag=LDO49_RS25555;product=amino acid permease;protein_id=WP_021158652.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 56998 57645 . - . ID=gene-LDO49_RS25560;Name=LDO49_RS25560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25560;old_locus_tag=BCEP4_490052 NZ_CAJZAV010000256.1 Protein Homology CDS 56998 57645 . - 0 ID=cds-WP_059651525.1;Parent=gene-LDO49_RS25560;Dbxref=GenBank:WP_059651525.1;Name=WP_059651525.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339114.1;locus_tag=LDO49_RS25560;product=glycine zipper 2TM domain-containing protein;protein_id=WP_059651525.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 58185 59384 . + . ID=gene-LDO49_RS25565;Name=LDO49_RS25565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25565;old_locus_tag=BCEP4_490053 NZ_CAJZAV010000256.1 Protein Homology CDS 58185 59384 . + 0 ID=cds-WP_060074509.1;Parent=gene-LDO49_RS25565;Dbxref=GenBank:WP_060074509.1;Name=WP_060074509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485033.1;locus_tag=LDO49_RS25565;product=amidohydrolase family protein;protein_id=WP_060074509.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 59496 60680 . + . ID=gene-LDO49_RS25570;Name=LDO49_RS25570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25570;old_locus_tag=BCEP4_490054 NZ_CAJZAV010000256.1 Protein Homology CDS 59496 60680 . + 0 ID=cds-WP_059487660.1;Parent=gene-LDO49_RS25570;Dbxref=GenBank:WP_059487660.1;Name=WP_059487660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758435.1;locus_tag=LDO49_RS25570;product=amidohydrolase family protein;protein_id=WP_059487660.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 60748 61233 . + . ID=gene-LDO49_RS25575;Name=LDO49_RS25575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25575;old_locus_tag=BCEP4_490055 NZ_CAJZAV010000256.1 Protein Homology CDS 60748 61233 . + 0 ID=cds-WP_224052482.1;Parent=gene-LDO49_RS25575;Dbxref=GenBank:WP_224052482.1;Name=WP_224052482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353684.1;locus_tag=LDO49_RS25575;product=nuclear transport factor 2 family protein;protein_id=WP_224052482.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 61341 62204 . - . ID=gene-LDO49_RS25580;Name=LDO49_RS25580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25580;old_locus_tag=BCEP4_490056 NZ_CAJZAV010000256.1 Protein Homology CDS 61341 62204 . - 0 ID=cds-WP_021158656.1;Parent=gene-LDO49_RS25580;Dbxref=GenBank:WP_021158656.1;Name=WP_021158656.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758437.1;locus_tag=LDO49_RS25580;product=LysR family transcriptional regulator;protein_id=WP_021158656.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 62238 62465 . - . ID=gene-LDO49_RS37625;Name=LDO49_RS37625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37625 NZ_CAJZAV010000256.1 Protein Homology CDS 62238 62465 . - 0 ID=cds-WP_372585870.1;Parent=gene-LDO49_RS37625;Dbxref=GenBank:WP_372585870.1;Name=WP_372585870.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020419.6;locus_tag=LDO49_RS37625;product=hypothetical protein;protein_id=WP_372585870.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 62594 63073 . - . ID=gene-LDO49_RS25585;Name=LDO49_RS25585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25585;old_locus_tag=BCEP4_490058 NZ_CAJZAV010000256.1 Protein Homology CDS 62594 63073 . - 0 ID=cds-WP_060074554.1;Parent=gene-LDO49_RS25585;Dbxref=GenBank:WP_060074554.1;Name=WP_060074554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900788.1;locus_tag=LDO49_RS25585;product=helix-turn-helix domain-containing protein;protein_id=WP_060074554.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 63537 64340 . + . ID=gene-LDO49_RS25590;Name=LDO49_RS25590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25590;old_locus_tag=BCEP4_490059 NZ_CAJZAV010000256.1 Protein Homology CDS 63537 64340 . + 0 ID=cds-WP_060074506.1;Parent=gene-LDO49_RS25590;Dbxref=GenBank:WP_060074506.1;Name=WP_060074506.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485061.1;locus_tag=LDO49_RS25590;product=ABC transporter substrate-binding protein;protein_id=WP_060074506.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 64380 65228 . + . ID=gene-LDO49_RS25595;Name=LDO49_RS25595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25595;old_locus_tag=BCEP4_490060 NZ_CAJZAV010000256.1 Protein Homology CDS 64380 65228 . + 0 ID=cds-WP_060074505.1;Parent=gene-LDO49_RS25595;Dbxref=GenBank:WP_060074505.1;Name=WP_060074505.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485056.1;locus_tag=LDO49_RS25595;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_060074505.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 65332 66069 . - . ID=gene-LDO49_RS25600;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=LDO49_RS25600;old_locus_tag=BCEP4_490061 NZ_CAJZAV010000256.1 Protein Homology CDS 65332 66069 . - 0 ID=cds-WP_048023760.1;Parent=gene-LDO49_RS25600;Dbxref=GenBank:WP_048023760.1;Name=WP_048023760.1;Ontology_term=GO:0006355,GO:0006547,GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-histidine metabolic process|0006547||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766658.1;locus_tag=LDO49_RS25600;product=histidine utilization repressor;protein_id=WP_048023760.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 66100 66642 . - . ID=gene-LDO49_RS25605;Name=LDO49_RS25605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25605;old_locus_tag=BCEP4_490062 NZ_CAJZAV010000256.1 Protein Homology CDS 66100 66642 . - 0 ID=cds-WP_021158662.1;Parent=gene-LDO49_RS25605;Dbxref=GenBank:WP_021158662.1;Name=WP_021158662.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659834.1;locus_tag=LDO49_RS25605;product=helix-turn-helix domain-containing protein;protein_id=WP_021158662.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 66776 67558 . + . ID=gene-LDO49_RS25610;Name=LDO49_RS25610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25610;old_locus_tag=BCEP4_490063 NZ_CAJZAV010000256.1 Protein Homology CDS 66776 67558 . + 0 ID=cds-WP_060074504.1;Parent=gene-LDO49_RS25610;Dbxref=GenBank:WP_060074504.1;Name=WP_060074504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094901.1;locus_tag=LDO49_RS25610;product=aldolase;protein_id=WP_060074504.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 67608 68504 . + . ID=gene-LDO49_RS25615;Name=LDO49_RS25615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25615;old_locus_tag=BCEP4_490064 NZ_CAJZAV010000256.1 Protein Homology CDS 67608 68504 . + 0 ID=cds-WP_224052483.1;Parent=gene-LDO49_RS25615;Dbxref=GenBank:WP_224052483.1;Name=WP_224052483.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009911529.1;locus_tag=LDO49_RS25615;product=dihydrodipicolinate synthase family protein;protein_id=WP_224052483.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 68501 69208 . + . ID=gene-LDO49_RS25620;Name=LDO49_RS25620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25620;old_locus_tag=BCEP4_490065 NZ_CAJZAV010000256.1 Protein Homology CDS 68501 69208 . + 0 ID=cds-WP_060074502.1;Parent=gene-LDO49_RS25620;Dbxref=GenBank:WP_060074502.1;Name=WP_060074502.1;Ontology_term=GO:0003824,GO:0043546;gbkey=CDS;go_function=catalytic activity|0003824||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353694.1;locus_tag=LDO49_RS25620;product=MOSC domain-containing protein;protein_id=WP_060074502.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 69222 69986 . - . ID=gene-LDO49_RS25625;Name=LDO49_RS25625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25625;old_locus_tag=BCEP4_490066 NZ_CAJZAV010000256.1 Protein Homology CDS 69222 69986 . - 0 ID=cds-WP_060074501.1;Parent=gene-LDO49_RS25625;Dbxref=GenBank:WP_060074501.1;Name=WP_060074501.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353695.1;locus_tag=LDO49_RS25625;product=SDR family oxidoreductase;protein_id=WP_060074501.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 70397 71104 . + . ID=gene-LDO49_RS25630;Name=LDO49_RS25630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25630;old_locus_tag=BCEP4_490067 NZ_CAJZAV010000256.1 Protein Homology CDS 70397 71104 . + 0 ID=cds-WP_059553165.1;Parent=gene-LDO49_RS25630;Dbxref=GenBank:WP_059553165.1;Name=WP_059553165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412148.1;locus_tag=LDO49_RS25630;product=YceH family protein;protein_id=WP_059553165.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 71196 72461 . - . ID=gene-LDO49_RS25635;Name=LDO49_RS25635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25635;old_locus_tag=BCEP4_490068 NZ_CAJZAV010000256.1 Protein Homology CDS 71196 72461 . - 0 ID=cds-WP_060074553.1;Parent=gene-LDO49_RS25635;Dbxref=GenBank:WP_060074553.1;Name=WP_060074553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485053.1;locus_tag=LDO49_RS25635;product=hypothetical protein;protein_id=WP_060074553.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 72461 72883 . - . ID=gene-LDO49_RS25640;Name=LDO49_RS25640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25640;old_locus_tag=BCEP4_490069 NZ_CAJZAV010000256.1 Protein Homology CDS 72461 72883 . - 0 ID=cds-WP_048023770.1;Parent=gene-LDO49_RS25640;Dbxref=GenBank:WP_048023770.1;Name=WP_048023770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353698.1;locus_tag=LDO49_RS25640;product=hypothetical protein;protein_id=WP_048023770.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 72912 73466 . - . ID=gene-LDO49_RS25645;Name=LDO49_RS25645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25645;old_locus_tag=BCEP4_490070 NZ_CAJZAV010000256.1 Protein Homology CDS 72912 73466 . - 0 ID=cds-WP_060074500.1;Parent=gene-LDO49_RS25645;Dbxref=GenBank:WP_060074500.1;Name=WP_060074500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485023.1;locus_tag=LDO49_RS25645;product=hypothetical protein;protein_id=WP_060074500.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 73872 75188 . + . ID=gene-LDO49_RS25650;Name=LDO49_RS25650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25650;old_locus_tag=BCEP4_490071 NZ_CAJZAV010000256.1 Protein Homology CDS 73872 75188 . + 0 ID=cds-WP_059495194.1;Parent=gene-LDO49_RS25650;Dbxref=GenBank:WP_059495194.1;Name=WP_059495194.1;Ontology_term=GO:0016042,GO:0004806;gbkey=CDS;go_function=triacylglycerol lipase activity|0004806||IEA;go_process=lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480268.1;locus_tag=LDO49_RS25650;product=lipase family protein;protein_id=WP_059495194.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 75378 76508 . + . ID=gene-LDO49_RS25655;Name=LDO49_RS25655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25655;old_locus_tag=BCEP4_490072 NZ_CAJZAV010000256.1 Protein Homology CDS 75378 76508 . + 0 ID=cds-WP_059487645.1;Parent=gene-LDO49_RS25655;Dbxref=GenBank:WP_059487645.1;Name=WP_059487645.1;Ontology_term=GO:0009073,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548832.1;locus_tag=LDO49_RS25655;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_059487645.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 76525 77481 . + . ID=gene-LDO49_RS25660;Name=LDO49_RS25660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25660;old_locus_tag=BCEP4_490073 NZ_CAJZAV010000256.1 GeneMarkS-2+ CDS 76525 77481 . + 0 ID=cds-WP_060074499.1;Parent=gene-LDO49_RS25660;Dbxref=GenBank:WP_060074499.1;Name=WP_060074499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS25660;product=hypothetical protein;protein_id=WP_060074499.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 77670 78098 . + . ID=gene-LDO49_RS25665;Name=LDO49_RS25665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25665;old_locus_tag=BCEP4_490074 NZ_CAJZAV010000256.1 Protein Homology CDS 77670 78098 . + 0 ID=cds-WP_042974211.1;Parent=gene-LDO49_RS25665;Dbxref=GenBank:WP_042974211.1;Name=WP_042974211.1;Ontology_term=GO:0019684,GO:0009055;gbkey=CDS;go_function=electron transfer activity|0009055||IEA;go_process=photosynthesis%2C light reaction|0019684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881069.1;locus_tag=LDO49_RS25665;product=PRC-barrel domain-containing protein;protein_id=WP_042974211.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 78307 79137 . - . ID=gene-LDO49_RS25670;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=LDO49_RS25670;old_locus_tag=BCEP4_490076 NZ_CAJZAV010000256.1 Protein Homology CDS 78307 79137 . - 0 ID=cds-WP_059487641.1;Parent=gene-LDO49_RS25670;Dbxref=GenBank:WP_059487641.1;Name=WP_059487641.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353710.1;locus_tag=LDO49_RS25670;product=diaminopimelate epimerase;protein_id=WP_059487641.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 79408 81486 . + . ID=gene-LDO49_RS25675;Name=LDO49_RS25675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25675;old_locus_tag=BCEP4_490077 NZ_CAJZAV010000256.1 Protein Homology CDS 79408 81486 . + 0 ID=cds-WP_021158673.1;Parent=gene-LDO49_RS25675;Dbxref=GenBank:WP_021158673.1;Name=WP_021158673.1;Ontology_term=GO:0009267,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603803.1;locus_tag=LDO49_RS25675;product=carbon starvation CstA family protein;protein_id=WP_021158673.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 81499 81705 . + . ID=gene-LDO49_RS25680;Name=LDO49_RS25680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25680;old_locus_tag=BCEP4_490078 NZ_CAJZAV010000256.1 Protein Homology CDS 81499 81705 . + 0 ID=cds-WP_006480280.1;Parent=gene-LDO49_RS25680;Dbxref=GenBank:WP_006480280.1;Name=WP_006480280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523392.1;locus_tag=LDO49_RS25680;product=YbdD/YjiX family protein;protein_id=WP_006480280.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 81822 83204 . - . ID=gene-LDO49_RS25685;Name=LDO49_RS25685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25685;old_locus_tag=BCEP4_490079 NZ_CAJZAV010000256.1 Protein Homology CDS 81822 83204 . - 0 ID=cds-WP_372585871.1;Parent=gene-LDO49_RS25685;Dbxref=GenBank:WP_372585871.1;Name=WP_372585871.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.6;locus_tag=LDO49_RS25685;product=MFS transporter;protein_id=WP_372585871.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 83254 83484 . + . ID=gene-LDO49_RS37630;Name=LDO49_RS37630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37630 NZ_CAJZAV010000256.1 GeneMarkS-2+ CDS 83254 83484 . + 0 ID=cds-WP_372585872.1;Parent=gene-LDO49_RS37630;Dbxref=GenBank:WP_372585872.1;Name=WP_372585872.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37630;product=ArsR/SmtB family transcription factor;protein_id=WP_372585872.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 83681 84301 . + . ID=gene-LDO49_RS25695;Name=trhA;gbkey=Gene;gene=trhA;gene_biotype=protein_coding;locus_tag=LDO49_RS25695;old_locus_tag=BCEP4_490081 NZ_CAJZAV010000256.1 Protein Homology CDS 83681 84301 . + 0 ID=cds-WP_021158676.1;Parent=gene-LDO49_RS25695;Dbxref=GenBank:WP_021158676.1;Name=WP_021158676.1;Ontology_term=GO:0019835;gbkey=CDS;gene=trhA;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009914721.1;locus_tag=LDO49_RS25695;product=PAQR family membrane homeostasis protein TrhA;protein_id=WP_021158676.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 84529 85935 . - . ID=gene-LDO49_RS25700;Name=LDO49_RS25700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25700;old_locus_tag=BCEP4_490082 NZ_CAJZAV010000256.1 Protein Homology CDS 84529 85935 . - 0 ID=cds-WP_060074497.1;Parent=gene-LDO49_RS25700;Dbxref=GenBank:WP_060074497.1;Name=WP_060074497.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548875.1;locus_tag=LDO49_RS25700;product=MFS transporter;protein_id=WP_060074497.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 85932 86363 . - . ID=gene-LDO49_RS25705;Name=LDO49_RS25705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25705;old_locus_tag=BCEP4_490083 NZ_CAJZAV010000256.1 Protein Homology CDS 85932 86363 . - 0 ID=cds-WP_060074496.1;Parent=gene-LDO49_RS25705;Dbxref=GenBank:WP_060074496.1;Name=WP_060074496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216245.1;locus_tag=LDO49_RS25705;product=nuclear transport factor 2 family protein;protein_id=WP_060074496.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 86502 86855 . - . ID=gene-LDO49_RS25710;Name=LDO49_RS25710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25710;old_locus_tag=BCEP4_490084 NZ_CAJZAV010000256.1 Protein Homology CDS 86502 86855 . - 0 ID=cds-WP_021158679.1;Parent=gene-LDO49_RS25710;Dbxref=GenBank:WP_021158679.1;Name=WP_021158679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548877.1;locus_tag=LDO49_RS25710;product=DOPA 4%2C5-dioxygenase family protein;protein_id=WP_021158679.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 87362 87739 . + . ID=gene-LDO49_RS25715;Name=LDO49_RS25715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25715;old_locus_tag=BCEP4_490086 NZ_CAJZAV010000256.1 Protein Homology CDS 87362 87739 . + 0 ID=cds-WP_027790307.1;Parent=gene-LDO49_RS25715;Dbxref=GenBank:WP_027790307.1;Name=WP_027790307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548878.1;locus_tag=LDO49_RS25715;product=hypothetical protein;protein_id=WP_027790307.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 87963 88451 . + . ID=gene-LDO49_RS25720;Name=LDO49_RS25720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25720;old_locus_tag=BCEP4_490087 NZ_CAJZAV010000256.1 Protein Homology CDS 87963 88451 . + 0 ID=cds-WP_048023786.1;Parent=gene-LDO49_RS25720;Dbxref=GenBank:WP_048023786.1;Name=WP_048023786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413722.1;locus_tag=LDO49_RS25720;product=hypothetical protein;protein_id=WP_048023786.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 88710 89870 . - . ID=gene-LDO49_RS25725;Name=hpnH;gbkey=Gene;gene=hpnH;gene_biotype=protein_coding;locus_tag=LDO49_RS25725;old_locus_tag=BCEP4_490088 NZ_CAJZAV010000256.1 Protein Homology CDS 88710 89870 . - 0 ID=cds-WP_021158681.1;Parent=gene-LDO49_RS25725;Dbxref=GenBank:WP_021158681.1;Name=WP_021158681.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;gene=hpnH;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602855.1;locus_tag=LDO49_RS25725;product=adenosyl-hopene transferase HpnH;protein_id=WP_021158681.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 89883 90824 . - . ID=gene-LDO49_RS25730;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=LDO49_RS25730;old_locus_tag=BCEP4_490089 NZ_CAJZAV010000256.1 Protein Homology CDS 89883 90824 . - 0 ID=cds-WP_021158682.1;Parent=gene-LDO49_RS25730;Dbxref=GenBank:WP_021158682.1;Name=WP_021158682.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894247.1;locus_tag=LDO49_RS25730;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_021158682.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 91227 92414 . + . ID=gene-LDO49_RS25735;Name=LDO49_RS25735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25735;old_locus_tag=BCEP4_490090 NZ_CAJZAV010000256.1 Protein Homology CDS 91227 92414 . + 0 ID=cds-WP_059495184.1;Parent=gene-LDO49_RS25735;Dbxref=GenBank:WP_059495184.1;Name=WP_059495184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480289.1;locus_tag=LDO49_RS25735;product=glycosyltransferase;protein_id=WP_059495184.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 92517 93479 . - . ID=gene-LDO49_RS25740;Name=LDO49_RS25740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25740;old_locus_tag=BCEP4_490091 NZ_CAJZAV010000256.1 Protein Homology CDS 92517 93479 . - 0 ID=cds-WP_224052485.1;Parent=gene-LDO49_RS25740;Dbxref=GenBank:WP_224052485.1;Name=WP_224052485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339215.1;locus_tag=LDO49_RS25740;product=hypothetical protein;protein_id=WP_224052485.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 93588 94595 . - . ID=gene-LDO49_RS25745;Name=hpnA;gbkey=Gene;gene=hpnA;gene_biotype=protein_coding;locus_tag=LDO49_RS25745;old_locus_tag=BCEP4_490092 NZ_CAJZAV010000256.1 Protein Homology CDS 93588 94595 . - 0 ID=cds-WP_011353724.1;Parent=gene-LDO49_RS25745;Dbxref=GenBank:WP_011353724.1;Name=WP_011353724.1;Ontology_term=GO:0005975,GO:0016757;gbkey=CDS;gene=hpnA;go_function=glycosyltransferase activity|0016757||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255812.1;locus_tag=LDO49_RS25745;product=hopanoid-associated sugar epimerase;protein_id=WP_011353724.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 94760 95056 . + . ID=gene-LDO49_RS25750;Name=LDO49_RS25750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25750;old_locus_tag=BCEP4_490093 NZ_CAJZAV010000256.1 Protein Homology CDS 94760 95056 . + 0 ID=cds-WP_006480292.1;Parent=gene-LDO49_RS25750;Dbxref=GenBank:WP_006480292.1;Name=WP_006480292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367074.1;locus_tag=LDO49_RS25750;product=acylphosphatase;protein_id=WP_006480292.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 95073 95972 . + . ID=gene-LDO49_RS25755;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=LDO49_RS25755;old_locus_tag=BCEP4_490094 NZ_CAJZAV010000256.1 Protein Homology CDS 95073 95972 . + 0 ID=cds-WP_059487621.1;Parent=gene-LDO49_RS25755;Dbxref=GenBank:WP_059487621.1;Name=WP_059487621.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480293.1;locus_tag=LDO49_RS25755;product=EamA family transporter RarD;protein_id=WP_059487621.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 95927 96223 . + . ID=gene-LDO49_RS25760;Name=LDO49_RS25760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25760 NZ_CAJZAV010000256.1 GeneMarkS-2+ CDS 95927 96223 . + 0 ID=cds-WP_224052486.1;Parent=gene-LDO49_RS25760;Dbxref=GenBank:WP_224052486.1;Name=WP_224052486.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS25760;product=hypothetical protein;protein_id=WP_224052486.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 96399 97520 . + . ID=gene-LDO49_RS25765;Name=LDO49_RS25765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25765;old_locus_tag=BCEP4_490095 NZ_CAJZAV010000256.1 Protein Homology CDS 96399 97520 . + 0 ID=cds-WP_021162458.1;Parent=gene-LDO49_RS25765;Dbxref=GenBank:WP_021162458.1;Name=WP_021162458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339217.1;locus_tag=LDO49_RS25765;product=OpgC domain-containing protein;protein_id=WP_021162458.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 97555 97761 . - . ID=gene-LDO49_RS25770;Name=LDO49_RS25770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25770;old_locus_tag=BCEP4_490096 NZ_CAJZAV010000256.1 Protein Homology CDS 97555 97761 . - 0 ID=cds-WP_027790314.1;Parent=gene-LDO49_RS25770;Dbxref=GenBank:WP_027790314.1;Name=WP_027790314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490170.1;locus_tag=LDO49_RS25770;product=hypothetical protein;protein_id=WP_027790314.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 97879 99399 . - . ID=gene-LDO49_RS25775;Name=LDO49_RS25775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25775;old_locus_tag=BCEP4_490097 NZ_CAJZAV010000256.1 Protein Homology CDS 97879 99399 . - 0 ID=cds-WP_059487620.1;Parent=gene-LDO49_RS25775;Dbxref=GenBank:WP_059487620.1;Name=WP_059487620.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407878.1;locus_tag=LDO49_RS25775;product=peptide MFS transporter;protein_id=WP_059487620.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 99899 100480 . + . ID=gene-LDO49_RS25780;Name=LDO49_RS25780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25780;old_locus_tag=BCEP4_490100 NZ_CAJZAV010000256.1 Protein Homology CDS 99899 100480 . + 0 ID=cds-WP_021162455.1;Parent=gene-LDO49_RS25780;Dbxref=GenBank:WP_021162455.1;Name=WP_021162455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900815.1;locus_tag=LDO49_RS25780;product=cupin domain-containing protein;protein_id=WP_021162455.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 100660 102270 . + . ID=gene-LDO49_RS25785;Name=LDO49_RS25785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25785;old_locus_tag=BCEP4_490101 NZ_CAJZAV010000256.1 Protein Homology CDS 100660 102270 . + 0 ID=cds-WP_042977043.1;Parent=gene-LDO49_RS25785;Dbxref=GenBank:WP_042977043.1;Name=WP_042977043.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659809.1;locus_tag=LDO49_RS25785;product=peptide ABC transporter substrate-binding protein;protein_id=WP_042977043.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 102282 103220 . + . ID=gene-LDO49_RS25790;Name=LDO49_RS25790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25790;old_locus_tag=BCEP4_490102 NZ_CAJZAV010000256.1 Protein Homology CDS 102282 103220 . + 0 ID=cds-WP_021162452.1;Parent=gene-LDO49_RS25790;Dbxref=GenBank:WP_021162452.1;Name=WP_021162452.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659808.1;locus_tag=LDO49_RS25790;product=ABC transporter permease subunit;protein_id=WP_021162452.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 103234 104136 . + . ID=gene-LDO49_RS25795;Name=LDO49_RS25795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25795;old_locus_tag=BCEP4_490103 NZ_CAJZAV010000256.1 Protein Homology CDS 103234 104136 . + 0 ID=cds-WP_021162451.1;Parent=gene-LDO49_RS25795;Dbxref=GenBank:WP_021162451.1;Name=WP_021162451.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900818.1;locus_tag=LDO49_RS25795;product=ABC transporter permease;protein_id=WP_021162451.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 104138 105130 . + . ID=gene-LDO49_RS25800;Name=LDO49_RS25800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25800;old_locus_tag=BCEP4_490104 NZ_CAJZAV010000256.1 Protein Homology CDS 104138 105130 . + 0 ID=cds-WP_048023803.1;Parent=gene-LDO49_RS25800;Dbxref=GenBank:WP_048023803.1;Name=WP_048023803.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353733.1;locus_tag=LDO49_RS25800;product=ABC transporter ATP-binding protein;protein_id=WP_048023803.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 105127 106146 . + . ID=gene-LDO49_RS25805;Name=LDO49_RS25805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25805;old_locus_tag=BCEP4_490105 NZ_CAJZAV010000256.1 Protein Homology CDS 105127 106146 . + 0 ID=cds-WP_059495174.1;Parent=gene-LDO49_RS25805;Dbxref=GenBank:WP_059495174.1;Name=WP_059495174.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216258.1;locus_tag=LDO49_RS25805;product=ABC transporter ATP-binding protein;protein_id=WP_059495174.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 106312 107772 . + . ID=gene-LDO49_RS25810;Name=LDO49_RS25810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25810;old_locus_tag=BCEP4_490106 NZ_CAJZAV010000256.1 Protein Homology CDS 106312 107772 . + 0 ID=cds-WP_059495171.1;Parent=gene-LDO49_RS25810;Dbxref=GenBank:WP_059495171.1;Name=WP_059495171.1;Ontology_term=GO:0006811,GO:0015802,GO:0015288,GO:0009279,GO:0019867,GO:0046930;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,outer membrane|0019867||IEA,pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,basic amino acid transport|0015802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900821.1;locus_tag=LDO49_RS25810;product=OprD family porin;protein_id=WP_059495171.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 107824 108816 . - . ID=gene-LDO49_RS25815;Name=LDO49_RS25815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25815;old_locus_tag=BCEP4_490107 NZ_CAJZAV010000256.1 Protein Homology CDS 107824 108816 . - 0 ID=cds-WP_021162447.1;Parent=gene-LDO49_RS25815;Dbxref=GenBank:WP_021162447.1;Name=WP_021162447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331030.1;locus_tag=LDO49_RS25815;product=DedA family protein/thiosulfate sulfurtransferase GlpE;protein_id=WP_021162447.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 108968 109237 . - . ID=gene-LDO49_RS25820;Name=LDO49_RS25820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25820;old_locus_tag=BCEP4_490108 NZ_CAJZAV010000256.1 Protein Homology CDS 108968 109237 . - 0 ID=cds-WP_011353737.1;Parent=gene-LDO49_RS25820;Dbxref=GenBank:WP_011353737.1;Name=WP_011353737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480304.1;locus_tag=LDO49_RS25820;product=hypothetical protein;protein_id=WP_011353737.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 109507 111840 . - . ID=gene-LDO49_RS25825;Name=LDO49_RS25825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25825;old_locus_tag=BCEP4_490109 NZ_CAJZAV010000256.1 Protein Homology CDS 109507 111840 . - 0 ID=cds-WP_224052487.1;Parent=gene-LDO49_RS25825;Dbxref=GenBank:WP_224052487.1;Name=WP_224052487.1;Ontology_term=GO:0034480;gbkey=CDS;go_function=phosphatidylcholine phospholipase C activity|0034480||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367063.1;locus_tag=LDO49_RS25825;product=phosphocholine-specific phospholipase C;protein_id=WP_224052487.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 112425 112925 . + . ID=gene-LDO49_RS25830;Name=LDO49_RS25830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25830;old_locus_tag=BCEP4_490110 NZ_CAJZAV010000256.1 Protein Homology CDS 112425 112925 . + 0 ID=cds-WP_048023811.1;Parent=gene-LDO49_RS25830;Dbxref=GenBank:WP_048023811.1;Name=WP_048023811.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480306.1;locus_tag=LDO49_RS25830;product=GNAT family N-acetyltransferase;protein_id=WP_048023811.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 113228 114826 . + . ID=gene-LDO49_RS25835;Name=LDO49_RS25835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25835;old_locus_tag=BCEP4_490111 NZ_CAJZAV010000256.1 Protein Homology CDS 113228 114826 . + 0 ID=cds-WP_060074491.1;Parent=gene-LDO49_RS25835;Dbxref=GenBank:WP_060074491.1;Name=WP_060074491.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494349.1;locus_tag=LDO49_RS25835;product=thioredoxin family protein;protein_id=WP_060074491.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 114900 115265 . + . ID=gene-LDO49_RS25840;Name=LDO49_RS25840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25840;old_locus_tag=BCEP4_490112 NZ_CAJZAV010000256.1 Protein Homology CDS 114900 115265 . + 0 ID=cds-WP_042975155.1;Parent=gene-LDO49_RS25840;Dbxref=GenBank:WP_042975155.1;Name=WP_042975155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090148.1;locus_tag=LDO49_RS25840;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_042975155.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 115343 115606 . - . ID=gene-LDO49_RS25845;Name=LDO49_RS25845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25845;old_locus_tag=BCEP4_490113 NZ_CAJZAV010000256.1 Protein Homology CDS 115343 115606 . - 0 ID=cds-WP_021159643.1;Parent=gene-LDO49_RS25845;Dbxref=GenBank:WP_021159643.1;Name=WP_021159643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353742.1;locus_tag=LDO49_RS25845;product=DUF4148 domain-containing protein;protein_id=WP_021159643.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 115863 117266 . - . ID=gene-LDO49_RS25850;Name=LDO49_RS25850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25850;old_locus_tag=BCEP4_490114 NZ_CAJZAV010000256.1 Protein Homology CDS 115863 117266 . - 0 ID=cds-WP_021159644.1;Parent=gene-LDO49_RS25850;Dbxref=GenBank:WP_021159644.1;Name=WP_021159644.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757738.1;locus_tag=LDO49_RS25850;product=GntP family permease;protein_id=WP_021159644.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 117593 119071 . + . ID=gene-LDO49_RS25855;Name=LDO49_RS25855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25855;old_locus_tag=BCEP4_490115 NZ_CAJZAV010000256.1 Protein Homology CDS 117593 119071 . + 0 ID=cds-WP_059495161.1;Parent=gene-LDO49_RS25855;Dbxref=GenBank:WP_059495161.1;Name=WP_059495161.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548900.1;locus_tag=LDO49_RS25855;product=sigma-54 interaction domain-containing protein;protein_id=WP_059495161.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 119126 119653 . + . ID=gene-LDO49_RS25860;Name=LDO49_RS25860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25860;old_locus_tag=BCEP4_490116 NZ_CAJZAV010000256.1 Protein Homology CDS 119126 119653 . + 0 ID=cds-WP_048023818.1;Parent=gene-LDO49_RS25860;Dbxref=GenBank:WP_048023818.1;Name=WP_048023818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397411.1;locus_tag=LDO49_RS25860;product=BON domain-containing protein;protein_id=WP_048023818.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 119715 119987 . + . ID=gene-LDO49_RS25865;Name=LDO49_RS25865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25865 NZ_CAJZAV010000256.1 Protein Homology CDS 119715 119987 . + 0 ID=cds-WP_048023821.1;Parent=gene-LDO49_RS25865;Dbxref=GenBank:WP_048023821.1;Name=WP_048023821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493616.1;locus_tag=LDO49_RS25865;product=hypothetical protein;protein_id=WP_048023821.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 120091 120390 . + . ID=gene-LDO49_RS25870;Name=LDO49_RS25870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25870;old_locus_tag=BCEP4_490117 NZ_CAJZAV010000256.1 Protein Homology CDS 120091 120390 . + 0 ID=cds-WP_021159650.1;Parent=gene-LDO49_RS25870;Dbxref=GenBank:WP_021159650.1;Name=WP_021159650.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010110637.1;locus_tag=LDO49_RS25870;product=H-NS histone family protein;protein_id=WP_021159650.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 120994 123351 . + . ID=gene-LDO49_RS25875;Name=LDO49_RS25875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25875;old_locus_tag=BCEP4_490119 NZ_CAJZAV010000256.1 Protein Homology CDS 120994 123351 . + 0 ID=cds-WP_224052488.1;Parent=gene-LDO49_RS25875;Dbxref=GenBank:WP_224052488.1;Name=WP_224052488.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724165.1;locus_tag=LDO49_RS25875;product=GNAT family N-acetyltransferase;protein_id=WP_224052488.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 124010 124561 . - . ID=gene-LDO49_RS25880;Name=LDO49_RS25880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25880;old_locus_tag=BCEP4_490121 NZ_CAJZAV010000256.1 Protein Homology CDS 124010 124561 . - 0 ID=cds-WP_042975149.1;Parent=gene-LDO49_RS25880;Dbxref=GenBank:WP_042975149.1;Name=WP_042975149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004266659.1;locus_tag=LDO49_RS25880;product=hypothetical protein;protein_id=WP_042975149.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 124763 125584 . - . ID=gene-LDO49_RS25885;Name=LDO49_RS25885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25885;old_locus_tag=BCEP4_490122 NZ_CAJZAV010000256.1 Protein Homology CDS 124763 125584 . - 0 ID=cds-WP_124841443.1;Parent=gene-LDO49_RS25885;Dbxref=GenBank:WP_124841443.1;Name=WP_124841443.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012468070.1;locus_tag=LDO49_RS25885;product=IclR family transcriptional regulator;protein_id=WP_124841443.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 126250 127098 . + . ID=gene-LDO49_RS25890;Name=LDO49_RS25890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25890;old_locus_tag=BCEP4_490123 NZ_CAJZAV010000256.1 Protein Homology CDS 126250 127098 . + 0 ID=cds-WP_059487600.1;Parent=gene-LDO49_RS25890;Dbxref=GenBank:WP_059487600.1;Name=WP_059487600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353752.1;locus_tag=LDO49_RS25890;product=ureidoglycolate lyase;protein_id=WP_059487600.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 127288 127671 . - . ID=gene-LDO49_RS25895;Name=LDO49_RS25895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25895;old_locus_tag=BCEP4_490124 NZ_CAJZAV010000256.1 Protein Homology CDS 127288 127671 . - 0 ID=cds-WP_021159659.1;Parent=gene-LDO49_RS25895;Dbxref=GenBank:WP_021159659.1;Name=WP_021159659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659789.1;locus_tag=LDO49_RS25895;product=VOC family protein;protein_id=WP_021159659.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 127926 128567 . + . ID=gene-LDO49_RS25900;Name=LDO49_RS25900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25900;old_locus_tag=BCEP4_490126 NZ_CAJZAV010000256.1 Protein Homology CDS 127926 128567 . + 0 ID=cds-WP_124841481.1;Parent=gene-LDO49_RS25900;Dbxref=GenBank:WP_124841481.1;Name=WP_124841481.1;Ontology_term=GO:0003676,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548910.1;locus_tag=LDO49_RS25900;product=CGNR zinc finger domain-containing protein;protein_id=WP_124841481.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 128615 130597 . - . ID=gene-LDO49_RS25905;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=LDO49_RS25905;old_locus_tag=BCEP4_490127 NZ_CAJZAV010000256.1 Protein Homology CDS 128615 130597 . - 0 ID=cds-WP_021159662.1;Parent=gene-LDO49_RS25905;Dbxref=GenBank:WP_021159662.1;Name=WP_021159662.1;Ontology_term=GO:0000160,GO:0006355,GO:0019629,GO:0000156,GO:0003677,GO:0005524,GO:0008134,GO:0043565,GO:0005737;gbkey=CDS;gene=prpR;go_component=cytoplasm|0005737||IEA;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481672.1;locus_tag=LDO49_RS25905;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_021159662.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 130768 131661 . + . ID=gene-LDO49_RS25910;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=LDO49_RS25910;old_locus_tag=BCEP4_490128 NZ_CAJZAV010000256.1 Protein Homology CDS 130768 131661 . + 0 ID=cds-WP_021159664.1;Parent=gene-LDO49_RS25910;Dbxref=GenBank:WP_021159664.1;Name=WP_021159664.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481649.1;locus_tag=LDO49_RS25910;product=methylisocitrate lyase;protein_id=WP_021159664.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 131777 132949 . + . ID=gene-LDO49_RS25915;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=LDO49_RS25915;old_locus_tag=BCEP4_490129 NZ_CAJZAV010000256.1 Protein Homology CDS 131777 132949 . + 0 ID=cds-WP_031400290.1;Parent=gene-LDO49_RS25915;Dbxref=GenBank:WP_031400290.1;Name=WP_031400290.1;Ontology_term=GO:0019679,GO:0036440,GO:0050440;gbkey=CDS;gene=prpC;go_function=citrate synthase activity|0036440||IEA,2-methylcitrate synthase activity|0050440||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757728.1;locus_tag=LDO49_RS25915;product=bifunctional 2-methylcitrate synthase/citrate synthase;protein_id=WP_031400290.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 133032 135626 . + . ID=gene-LDO49_RS25920;Name=acnD;gbkey=Gene;gene=acnD;gene_biotype=protein_coding;locus_tag=LDO49_RS25920;old_locus_tag=BCEP4_490130 NZ_CAJZAV010000256.1 Protein Homology CDS 133032 135626 . + 0 ID=cds-WP_224052489.1;Parent=gene-LDO49_RS25920;Dbxref=GenBank:WP_224052489.1;Name=WP_224052489.1;Ontology_term=GO:0019679,GO:0047456;gbkey=CDS;gene=acnD;go_function=2-methylisocitrate dehydratase activity|0047456||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009981139.1;locus_tag=LDO49_RS25920;product=Fe/S-dependent 2-methylisocitrate dehydratase AcnD;protein_id=WP_224052489.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 135653 136846 . + . ID=gene-LDO49_RS25925;Name=prpF;gbkey=Gene;gene=prpF;gene_biotype=protein_coding;locus_tag=LDO49_RS25925;old_locus_tag=BCEP4_490131 NZ_CAJZAV010000256.1 Protein Homology CDS 135653 136846 . + 0 ID=cds-WP_059553120.1;Parent=gene-LDO49_RS25925;Dbxref=GenBank:WP_059553120.1;Name=WP_059553120.1;Ontology_term=GO:0019629,GO:0016853;gbkey=CDS;gene=prpF;go_function=isomerase activity|0016853||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090131.1;locus_tag=LDO49_RS25925;product=2-methylaconitate cis-trans isomerase PrpF;protein_id=WP_059553120.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 136905 137843 . - . ID=gene-LDO49_RS25930;Name=LDO49_RS25930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25930;old_locus_tag=BCEP4_490132 NZ_CAJZAV010000256.1 Protein Homology CDS 136905 137843 . - 0 ID=cds-WP_224052490.1;Parent=gene-LDO49_RS25930;Dbxref=GenBank:WP_224052490.1;Name=WP_224052490.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481650.1;locus_tag=LDO49_RS25930;product=alpha/beta hydrolase;protein_id=WP_224052490.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 137882 139036 . - . ID=gene-LDO49_RS25935;Name=LDO49_RS25935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25935;old_locus_tag=BCEP4_490133 NZ_CAJZAV010000256.1 Protein Homology CDS 137882 139036 . - 0 ID=cds-WP_224052491.1;Parent=gene-LDO49_RS25935;Dbxref=GenBank:WP_224052491.1;Name=WP_224052491.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481666.1;locus_tag=LDO49_RS25935;product=acyl-CoA dehydrogenase family protein;protein_id=WP_224052491.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 139075 140397 . - . ID=gene-LDO49_RS25940;Name=LDO49_RS25940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25940;old_locus_tag=BCEP4_490134 NZ_CAJZAV010000256.1 Protein Homology CDS 139075 140397 . - 0 ID=cds-WP_059586171.1;Parent=gene-LDO49_RS25940;Dbxref=GenBank:WP_059586171.1;Name=WP_059586171.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548915.1;locus_tag=LDO49_RS25940;product=MFS transporter;protein_id=WP_059586171.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 140408 141460 . - . ID=gene-LDO49_RS25945;Name=LDO49_RS25945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25945;old_locus_tag=BCEP4_490135 NZ_CAJZAV010000256.1 Protein Homology CDS 140408 141460 . - 0 ID=cds-WP_224052492.1;Parent=gene-LDO49_RS25945;Dbxref=GenBank:WP_224052492.1;Name=WP_224052492.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339241.1;locus_tag=LDO49_RS25945;product=porin;protein_id=WP_224052492.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 141545 142345 . - . ID=gene-LDO49_RS25950;Name=LDO49_RS25950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25950;old_locus_tag=BCEP4_490136 NZ_CAJZAV010000256.1 Protein Homology CDS 141545 142345 . - 0 ID=cds-WP_081076877.1;Parent=gene-LDO49_RS25950;Dbxref=GenBank:WP_081076877.1;Name=WP_081076877.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339242.1;locus_tag=LDO49_RS25950;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_081076877.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 142342 143562 . - . ID=gene-LDO49_RS25955;Name=LDO49_RS25955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25955;old_locus_tag=BCEP4_490137 NZ_CAJZAV010000256.1 Protein Homology CDS 142342 143562 . - 0 ID=cds-WP_124922944.1;Parent=gene-LDO49_RS25955;Dbxref=GenBank:WP_124922944.1;Name=WP_124922944.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548918.1;locus_tag=LDO49_RS25955;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_124922944.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 143642 144424 . - . ID=gene-LDO49_RS25960;Name=LDO49_RS25960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25960;old_locus_tag=BCEP4_490138 NZ_CAJZAV010000256.1 Protein Homology CDS 143642 144424 . - 0 ID=cds-WP_059622095.1;Parent=gene-LDO49_RS25960;Dbxref=GenBank:WP_059622095.1;Name=WP_059622095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481671.1;locus_tag=LDO49_RS25960;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_059622095.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 144559 145326 . + . ID=gene-LDO49_RS25965;Name=LDO49_RS25965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25965;old_locus_tag=BCEP4_490139 NZ_CAJZAV010000256.1 Protein Homology CDS 144559 145326 . + 0 ID=cds-WP_021159675.1;Parent=gene-LDO49_RS25965;Dbxref=GenBank:WP_021159675.1;Name=WP_021159675.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752773.1;locus_tag=LDO49_RS25965;product=IclR family transcriptional regulator;protein_id=WP_021159675.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 145413 146465 . + . ID=gene-LDO49_RS25970;Name=LDO49_RS25970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25970;old_locus_tag=BCEP4_490140 NZ_CAJZAV010000256.1 Protein Homology CDS 145413 146465 . + 0 ID=cds-WP_124841439.1;Parent=gene-LDO49_RS25970;Dbxref=GenBank:WP_124841439.1;Name=WP_124841439.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339246.1;locus_tag=LDO49_RS25970;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_124841439.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 146588 146836 . + . ID=gene-LDO49_RS25975;Name=LDO49_RS25975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25975;old_locus_tag=BCEP4_490141 NZ_CAJZAV010000256.1 Protein Homology CDS 146588 146836 . + 0 ID=cds-WP_059495134.1;Parent=gene-LDO49_RS25975;Dbxref=GenBank:WP_059495134.1;Name=WP_059495134.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659781.1;locus_tag=LDO49_RS25975;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_059495134.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 146826 147107 . + . ID=gene-LDO49_RS25980;Name=LDO49_RS25980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25980;old_locus_tag=BCEP4_490142 NZ_CAJZAV010000256.1 Protein Homology CDS 146826 147107 . + 0 ID=cds-WP_059495132.1;Parent=gene-LDO49_RS25980;Dbxref=GenBank:WP_059495132.1;Name=WP_059495132.1;Ontology_term=GO:0017148,GO:0004521,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA endonuclease activity|0004521||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752776.1;locus_tag=LDO49_RS25980;product=type II toxin-antitoxin system RelE family toxin;protein_id=WP_059495132.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 147148 147591 . - . ID=gene-LDO49_RS25985;Name=LDO49_RS25985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25985;old_locus_tag=BCEP4_490143 NZ_CAJZAV010000256.1 Protein Homology CDS 147148 147591 . - 0 ID=cds-WP_059523219.1;Parent=gene-LDO49_RS25985;Dbxref=GenBank:WP_059523219.1;Name=WP_059523219.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900849.1;locus_tag=LDO49_RS25985;product=PaaI family thioesterase;protein_id=WP_059523219.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 147863 149482 . + . ID=gene-LDO49_RS25990;Name=LDO49_RS25990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25990;old_locus_tag=BCEP4_490144 NZ_CAJZAV010000256.1 Protein Homology CDS 147863 149482 . + 0 ID=cds-WP_224052493.1;Parent=gene-LDO49_RS25990;Dbxref=GenBank:WP_224052493.1;Name=WP_224052493.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548924.1;locus_tag=LDO49_RS25990;product=methyl-accepting chemotaxis protein;protein_id=WP_224052493.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 149455 150564 . - . ID=gene-LDO49_RS25995;Name=LDO49_RS25995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS25995;old_locus_tag=BCEP4_490145 NZ_CAJZAV010000256.1 Protein Homology CDS 149455 150564 . - 0 ID=cds-WP_124841438.1;Parent=gene-LDO49_RS25995;Dbxref=GenBank:WP_124841438.1;Name=WP_124841438.1;Ontology_term=GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397389.1;locus_tag=LDO49_RS25995;product=AGE family epimerase/isomerase;protein_id=WP_124841438.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 150679 151377 . + . ID=gene-LDO49_RS26000;Name=LDO49_RS26000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26000;old_locus_tag=BCEP4_490147 NZ_CAJZAV010000256.1 Protein Homology CDS 150679 151377 . + 0 ID=cds-WP_021159681.1;Parent=gene-LDO49_RS26000;Dbxref=GenBank:WP_021159681.1;Name=WP_021159681.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331058.1;locus_tag=LDO49_RS26000;product=MgtC/SapB family protein;protein_id=WP_021159681.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 151470 152909 . + . ID=gene-LDO49_RS26005;Name=LDO49_RS26005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26005;old_locus_tag=BCEP4_490148 NZ_CAJZAV010000256.1 Protein Homology CDS 151470 152909 . + 0 ID=cds-WP_224052494.1;Parent=gene-LDO49_RS26005;Dbxref=GenBank:WP_224052494.1;Name=WP_224052494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494364.1;locus_tag=LDO49_RS26005;product=flagellar hook-length control protein FliK;protein_id=WP_224052494.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 153085 153240 . + . ID=gene-LDO49_RS26010;Name=LDO49_RS26010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26010;old_locus_tag=BCEP4_490149 NZ_CAJZAV010000256.1 Protein Homology CDS 153085 153240 . + 0 ID=cds-WP_006481665.1;Parent=gene-LDO49_RS26010;Dbxref=GenBank:WP_006481665.1;Name=WP_006481665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480339.1;locus_tag=LDO49_RS26010;product=hypothetical protein;protein_id=WP_006481665.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 153437 153916 . + . ID=gene-LDO49_RS26015;Name=LDO49_RS26015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26015;old_locus_tag=BCEP4_490150 NZ_CAJZAV010000256.1 Protein Homology CDS 153437 153916 . + 0 ID=cds-WP_059495124.1;Parent=gene-LDO49_RS26015;Dbxref=GenBank:WP_059495124.1;Name=WP_059495124.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367039.1;locus_tag=LDO49_RS26015;product=GNAT family N-acetyltransferase;protein_id=WP_059495124.1;transl_table=11 NZ_CAJZAV010000256.1 RefSeq gene 154101 154289 . + . ID=gene-LDO49_RS38340;Name=LDO49_RS38340;end_range=154289,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38340;partial=true;start_range=.,154101 NZ_CAJZAV010000256.1 GeneMarkS-2+ CDS 154101 154289 . + 2 ID=cds-WP_443798011.1;Parent=gene-LDO49_RS38340;Dbxref=GenBank:WP_443798011.1;Name=WP_443798011.1;end_range=154289,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS38340;partial=true;product=hypothetical protein;protein_id=WP_443798011.1;start_range=.,154101;transl_table=11 ##sequence-region NZ_CAJZAV010000257.1 1 53846 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000257.1 RefSeq region 1 53846 . + . ID=NZ_CAJZAV010000257.1:1..53846;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_5 NZ_CAJZAV010000257.1 RefSeq gene 395 925 . - . ID=gene-LDO49_RS26020;Name=LDO49_RS26020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26020;old_locus_tag=BCEP4_50001 NZ_CAJZAV010000257.1 Protein Homology CDS 395 925 . - 0 ID=cds-WP_175757937.1;Parent=gene-LDO49_RS26020;Dbxref=GenBank:WP_175757937.1;Name=WP_175757937.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410127.1;locus_tag=LDO49_RS26020;product=cytochrome b;protein_id=WP_175757937.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 925 2019 . - . ID=gene-LDO49_RS26025;Name=LDO49_RS26025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26025;old_locus_tag=BCEP4_50002 NZ_CAJZAV010000257.1 Protein Homology CDS 925 2019 . - 0 ID=cds-WP_224052495.1;Parent=gene-LDO49_RS26025;Dbxref=GenBank:WP_224052495.1;Name=WP_224052495.1;Ontology_term=GO:0042542,GO:0004601,GO:0005506,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,iron ion binding|0005506||IEA,heme binding|0020037||IEA;go_process=response to hydrogen peroxide|0042542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416504.1;locus_tag=LDO49_RS26025;product=catalase family peroxidase;protein_id=WP_224052495.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 2176 2697 . + . ID=gene-LDO49_RS26030;Name=LDO49_RS26030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26030;old_locus_tag=BCEP4_50004 NZ_CAJZAV010000257.1 Protein Homology CDS 2176 2697 . + 0 ID=cds-WP_021162275.1;Parent=gene-LDO49_RS26030;Dbxref=GenBank:WP_021162275.1;Name=WP_021162275.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350440.1;locus_tag=LDO49_RS26030;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_021162275.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 2694 3452 . + . ID=gene-LDO49_RS26035;Name=LDO49_RS26035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26035;old_locus_tag=BCEP4_50005 NZ_CAJZAV010000257.1 Protein Homology CDS 2694 3452 . + 0 ID=cds-WP_048024041.1;Parent=gene-LDO49_RS26035;Dbxref=GenBank:WP_048024041.1;Name=WP_048024041.1;Ontology_term=GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477209.1;locus_tag=LDO49_RS26035;product=anti-sigma factor family protein;protein_id=WP_048024041.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 3702 4268 . - . ID=gene-LDO49_RS26040;Name=LDO49_RS26040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26040;old_locus_tag=BCEP4_50006 NZ_CAJZAV010000257.1 Protein Homology CDS 3702 4268 . - 0 ID=cds-WP_060128987.1;Parent=gene-LDO49_RS26040;Dbxref=GenBank:WP_060128987.1;Name=WP_060128987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099571.1;locus_tag=LDO49_RS26040;product=hypothetical protein;protein_id=WP_060128987.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 5020 5337 . - . ID=gene-LDO49_RS26045;Name=LDO49_RS26045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26045;old_locus_tag=BCEP4_50008 NZ_CAJZAV010000257.1 Protein Homology CDS 5020 5337 . - 0 ID=cds-WP_059709608.1;Parent=gene-LDO49_RS26045;Dbxref=GenBank:WP_059709608.1;Name=WP_059709608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350443.1;locus_tag=LDO49_RS26045;product=hypothetical protein;protein_id=WP_059709608.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 5353 6306 . - . ID=gene-LDO49_RS26050;Name=LDO49_RS26050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26050;old_locus_tag=BCEP4_50009 NZ_CAJZAV010000257.1 Protein Homology CDS 5353 6306 . - 0 ID=cds-WP_308044030.1;Parent=gene-LDO49_RS26050;Dbxref=GenBank:WP_308044030.1;Name=WP_308044030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416498.1;locus_tag=LDO49_RS26050;product=Imm72 family immunity protein;protein_id=WP_308044030.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 6287 6850 . - . ID=gene-LDO49_RS26055;Name=LDO49_RS26055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26055;old_locus_tag=BCEP4_50010 NZ_CAJZAV010000257.1 GeneMarkS-2+ CDS 6287 6850 . - 0 ID=cds-WP_224052496.1;Parent=gene-LDO49_RS26055;Dbxref=GenBank:WP_224052496.1;Name=WP_224052496.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS26055;product=hypothetical protein;protein_id=WP_224052496.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 7003 7221 . - . ID=gene-LDO49_RS26060;Name=LDO49_RS26060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26060;old_locus_tag=BCEP4_50011 NZ_CAJZAV010000257.1 GeneMarkS-2+ CDS 7003 7221 . - 0 ID=cds-WP_224052497.1;Parent=gene-LDO49_RS26060;Dbxref=GenBank:WP_224052497.1;Name=WP_224052497.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS26060;product=hypothetical protein;protein_id=WP_224052497.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 7218 7529 . - . ID=gene-LDO49_RS26065;Name=LDO49_RS26065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26065;old_locus_tag=BCEP4_50012 NZ_CAJZAV010000257.1 Protein Homology CDS 7218 7529 . - 0 ID=cds-WP_034195831.1;Parent=gene-LDO49_RS26065;Dbxref=GenBank:WP_034195831.1;Name=WP_034195831.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026918.6;locus_tag=LDO49_RS26065;product=Imm53 family immunity protein;protein_id=WP_034195831.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 7561 7815 . - . ID=gene-LDO49_RS26070;Name=LDO49_RS26070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26070;old_locus_tag=BCEP4_50013 NZ_CAJZAV010000257.1 Protein Homology CDS 7561 7815 . - 0 ID=cds-WP_059650048.1;Parent=gene-LDO49_RS26070;Dbxref=GenBank:WP_059650048.1;Name=WP_059650048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544483.1;locus_tag=LDO49_RS26070;product=hypothetical protein;protein_id=WP_059650048.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 8403 8479 . + . ID=gene-LDO49_RS26075;Name=LDO49_RS26075;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS26075;old_locus_tag=BCEP4_TRNA1 NZ_CAJZAV010000257.1 tRNAscan-SE tRNA 8403 8479 . + . ID=rna-LDO49_RS26075;Parent=gene-LDO49_RS26075;anticodon=(pos:8437..8439);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS26075;product=tRNA-Val NZ_CAJZAV010000257.1 tRNAscan-SE exon 8403 8479 . + . ID=exon-LDO49_RS26075-1;Parent=rna-LDO49_RS26075;anticodon=(pos:8437..8439);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS26075;product=tRNA-Val NZ_CAJZAV010000257.1 RefSeq gene 8800 9315 . + . ID=gene-LDO49_RS26080;Name=LDO49_RS26080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26080;old_locus_tag=BCEP4_50014 NZ_CAJZAV010000257.1 Protein Homology CDS 8800 9315 . + 0 ID=cds-WP_060343835.1;Parent=gene-LDO49_RS26080;Dbxref=GenBank:WP_060343835.1;Name=WP_060343835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487313.1;locus_tag=LDO49_RS26080;product=DUF2628 domain-containing protein;protein_id=WP_060343835.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 9429 10310 . - . ID=gene-LDO49_RS26085;Name=LDO49_RS26085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26085;old_locus_tag=BCEP4_50015 NZ_CAJZAV010000257.1 Protein Homology CDS 9429 10310 . - 0 ID=cds-WP_224052498.1;Parent=gene-LDO49_RS26085;Dbxref=GenBank:WP_224052498.1;Name=WP_224052498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655554.1;locus_tag=LDO49_RS26085;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_224052498.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 10310 10786 . - . ID=gene-LDO49_RS26090;Name=LDO49_RS26090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26090;old_locus_tag=BCEP4_50016 NZ_CAJZAV010000257.1 Protein Homology CDS 10310 10786 . - 0 ID=cds-WP_021162266.1;Parent=gene-LDO49_RS26090;Dbxref=GenBank:WP_021162266.1;Name=WP_021162266.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477215.1;locus_tag=LDO49_RS26090;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_021162266.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 11345 12568 . + . ID=gene-LDO49_RS26095;Name=egtB;gbkey=Gene;gene=egtB;gene_biotype=protein_coding;locus_tag=LDO49_RS26095;old_locus_tag=BCEP4_50018 NZ_CAJZAV010000257.1 Protein Homology CDS 11345 12568 . + 0 ID=cds-WP_059675993.1;Parent=gene-LDO49_RS26095;Dbxref=GenBank:WP_059675993.1;Name=WP_059675993.1;Ontology_term=GO:0052699;gbkey=CDS;gene=egtB;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327561.1;locus_tag=LDO49_RS26095;product=ergothioneine biosynthesis protein EgtB;protein_id=WP_059675993.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 12552 13565 . + . ID=gene-LDO49_RS26100;Name=egtD;gbkey=Gene;gene=egtD;gene_biotype=protein_coding;locus_tag=LDO49_RS26100;old_locus_tag=BCEP4_50019 NZ_CAJZAV010000257.1 Protein Homology CDS 12552 13565 . + 0 ID=cds-WP_224052499.1;Parent=gene-LDO49_RS26100;Dbxref=GenBank:WP_224052499.1;Name=WP_224052499.1;Ontology_term=GO:0052699,GO:0052706;gbkey=CDS;gene=egtD;go_function=L-histidine N(alpha)-methyltransferase activity|0052706||IEA;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412578.1;locus_tag=LDO49_RS26100;product=L-histidine N(alpha)-methyltransferase;protein_id=WP_224052499.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 13853 14158 . + . ID=gene-LDO49_RS26105;Name=LDO49_RS26105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26105;old_locus_tag=BCEP4_50021 NZ_CAJZAV010000257.1 Protein Homology CDS 13853 14158 . + 0 ID=cds-WP_021162263.1;Parent=gene-LDO49_RS26105;Dbxref=GenBank:WP_021162263.1;Name=WP_021162263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882740.1;locus_tag=LDO49_RS26105;product=hypothetical protein;protein_id=WP_021162263.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 14196 14450 . + . ID=gene-LDO49_RS26110;Name=LDO49_RS26110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26110;old_locus_tag=BCEP4_50022 NZ_CAJZAV010000257.1 Protein Homology CDS 14196 14450 . + 0 ID=cds-WP_021162262.1;Parent=gene-LDO49_RS26110;Dbxref=GenBank:WP_021162262.1;Name=WP_021162262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212432.1;locus_tag=LDO49_RS26110;product=hypothetical protein;protein_id=WP_021162262.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 14638 15012 . + . ID=gene-LDO49_RS26115;Name=LDO49_RS26115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26115;old_locus_tag=BCEP4_50023 NZ_CAJZAV010000257.1 Protein Homology CDS 14638 15012 . + 0 ID=cds-WP_021162261.1;Parent=gene-LDO49_RS26115;Dbxref=GenBank:WP_021162261.1;Name=WP_021162261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487299.1;locus_tag=LDO49_RS26115;product=hypothetical protein;protein_id=WP_021162261.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 15267 18293 . - . ID=gene-LDO49_RS26120;Name=LDO49_RS26120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26120;old_locus_tag=BCEP4_50024 NZ_CAJZAV010000257.1 Protein Homology CDS 15267 18293 . - 0 ID=cds-WP_059650042.1;Parent=gene-LDO49_RS26120;Dbxref=GenBank:WP_059650042.1;Name=WP_059650042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212434.1;locus_tag=LDO49_RS26120;product=type III restriction-modification system endonuclease;protein_id=WP_059650042.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 18293 20311 . - . ID=gene-LDO49_RS26125;Name=LDO49_RS26125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26125;old_locus_tag=BCEP4_50025 NZ_CAJZAV010000257.1 Protein Homology CDS 18293 20311 . - 0 ID=cds-WP_059490348.1;Parent=gene-LDO49_RS26125;Dbxref=GenBank:WP_059490348.1;Name=WP_059490348.1;Ontology_term=GO:0006306,GO:0009307,GO:0003677,GO:0008168,GO:0008170,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,N-methyltransferase activity|0008170||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=obsolete DNA methylation|0006306||IEA,DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722124.1;locus_tag=LDO49_RS26125;product=site-specific DNA-methyltransferase;protein_id=WP_059490348.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 20662 21792 . - . ID=gene-LDO49_RS26130;Name=LDO49_RS26130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26130;old_locus_tag=BCEP4_50026 NZ_CAJZAV010000257.1 Protein Homology CDS 20662 21792 . - 0 ID=cds-WP_042976882.1;Parent=gene-LDO49_RS26130;Dbxref=GenBank:WP_042976882.1;Name=WP_042976882.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895421.1;locus_tag=LDO49_RS26130;product=porin;protein_id=WP_042976882.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 22074 22751 . - . ID=gene-LDO49_RS26135;Name=LDO49_RS26135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26135;old_locus_tag=BCEP4_50027 NZ_CAJZAV010000257.1 Protein Homology CDS 22074 22751 . - 0 ID=cds-WP_021162256.1;Parent=gene-LDO49_RS26135;Dbxref=GenBank:WP_021162256.1;Name=WP_021162256.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655563.1;locus_tag=LDO49_RS26135;product=response regulator;protein_id=WP_021162256.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 22765 24132 . - . ID=gene-LDO49_RS26140;Name=LDO49_RS26140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26140;old_locus_tag=BCEP4_50028 NZ_CAJZAV010000257.1 Protein Homology CDS 22765 24132 . - 0 ID=cds-WP_021162255.1;Parent=gene-LDO49_RS26140;Dbxref=GenBank:WP_021162255.1;Name=WP_021162255.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495405.1;locus_tag=LDO49_RS26140;product=sensor histidine kinase;protein_id=WP_021162255.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 24221 25078 . - . ID=gene-LDO49_RS26145;Name=LDO49_RS26145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26145;old_locus_tag=BCEP4_50029 NZ_CAJZAV010000257.1 Protein Homology CDS 24221 25078 . - 0 ID=cds-WP_104767571.1;Parent=gene-LDO49_RS26145;Dbxref=GenBank:WP_104767571.1;Name=WP_104767571.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882748.1;locus_tag=LDO49_RS26145;product=ABC transporter permease;protein_id=WP_104767571.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 25117 25914 . - . ID=gene-LDO49_RS26150;Name=LDO49_RS26150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26150;old_locus_tag=BCEP4_50030 NZ_CAJZAV010000257.1 Protein Homology CDS 25117 25914 . - 0 ID=cds-WP_027788757.1;Parent=gene-LDO49_RS26150;Dbxref=GenBank:WP_027788757.1;Name=WP_027788757.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205003.1;locus_tag=LDO49_RS26150;product=ABC transporter ATP-binding protein;protein_id=WP_027788757.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 26029 27033 . - . ID=gene-LDO49_RS26155;Name=LDO49_RS26155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26155;old_locus_tag=BCEP4_50031 NZ_CAJZAV010000257.1 Protein Homology CDS 26029 27033 . - 0 ID=cds-WP_224052500.1;Parent=gene-LDO49_RS26155;Dbxref=GenBank:WP_224052500.1;Name=WP_224052500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202867.1;locus_tag=LDO49_RS26155;product=ABC transporter substrate-binding protein;protein_id=WP_224052500.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 27545 28189 . + . ID=gene-LDO49_RS26160;Name=LDO49_RS26160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26160;old_locus_tag=BCEP4_50032 NZ_CAJZAV010000257.1 Protein Homology CDS 27545 28189 . + 0 ID=cds-WP_308044034.1;Parent=gene-LDO49_RS26160;Dbxref=GenBank:WP_308044034.1;Name=WP_308044034.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008643854.1;locus_tag=LDO49_RS26160;product=response regulator transcription factor;protein_id=WP_308044034.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 28198 29157 . - . ID=gene-LDO49_RS26165;Name=LDO49_RS26165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26165;old_locus_tag=BCEP4_50034 NZ_CAJZAV010000257.1 Protein Homology CDS 28198 29157 . - 0 ID=cds-WP_059493833.1;Parent=gene-LDO49_RS26165;Dbxref=GenBank:WP_059493833.1;Name=WP_059493833.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.6;locus_tag=LDO49_RS26165;product=fimbrial protein;protein_id=WP_059493833.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 29235 31826 . - . ID=gene-LDO49_RS26170;Name=LDO49_RS26170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26170;old_locus_tag=BCEP4_50035 NZ_CAJZAV010000257.1 Protein Homology CDS 29235 31826 . - 0 ID=cds-WP_224052502.1;Parent=gene-LDO49_RS26170;Dbxref=GenBank:WP_224052502.1;Name=WP_224052502.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895429.1;locus_tag=LDO49_RS26170;product=fimbria/pilus outer membrane usher protein;protein_id=WP_224052502.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 31991 32764 . - . ID=gene-LDO49_RS26175;Name=LDO49_RS26175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26175;old_locus_tag=BCEP4_50036 NZ_CAJZAV010000257.1 Protein Homology CDS 31991 32764 . - 0 ID=cds-WP_224052503.1;Parent=gene-LDO49_RS26175;Dbxref=GenBank:WP_224052503.1;Name=WP_224052503.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011297858.1;locus_tag=LDO49_RS26175;product=fimbria/pilus periplasmic chaperone;protein_id=WP_224052503.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 32908 33459 . - . ID=gene-LDO49_RS26180;Name=LDO49_RS26180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26180;old_locus_tag=BCEP4_50037 NZ_CAJZAV010000257.1 Protein Homology CDS 32908 33459 . - 0 ID=cds-WP_021162247.1;Parent=gene-LDO49_RS26180;Dbxref=GenBank:WP_021162247.1;Name=WP_021162247.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094176.1;locus_tag=LDO49_RS26180;product=fimbrial protein;protein_id=WP_021162247.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 33644 33883 . - . ID=gene-LDO49_RS26185;Name=LDO49_RS26185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26185;old_locus_tag=BCEP4_50038 NZ_CAJZAV010000257.1 GeneMarkS-2+ CDS 33644 33883 . - 0 ID=cds-WP_059568812.1;Parent=gene-LDO49_RS26185;Dbxref=GenBank:WP_059568812.1;Name=WP_059568812.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS26185;product=hypothetical protein;protein_id=WP_059568812.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 33935 34249 . - . ID=gene-LDO49_RS26190;Name=LDO49_RS26190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26190;old_locus_tag=BCEP4_50039 NZ_CAJZAV010000257.1 Protein Homology CDS 33935 34249 . - 0 ID=cds-WP_059490343.1;Parent=gene-LDO49_RS26190;Dbxref=GenBank:WP_059490343.1;Name=WP_059490343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094180.1;locus_tag=LDO49_RS26190;product=hypothetical protein;protein_id=WP_059490343.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 34355 36502 . - . ID=gene-LDO49_RS26195;Name=LDO49_RS26195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26195;old_locus_tag=BCEP4_50040 NZ_CAJZAV010000257.1 Protein Homology CDS 34355 36502 . - 0 ID=cds-WP_224052504.1;Parent=gene-LDO49_RS26195;Dbxref=GenBank:WP_224052504.1;Name=WP_224052504.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750420.1;locus_tag=LDO49_RS26195;product=peptidase domain-containing ABC transporter;protein_id=WP_224052504.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 36543 37802 . - . ID=gene-LDO49_RS26200;Name=LDO49_RS26200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26200;old_locus_tag=BCEP4_50041 NZ_CAJZAV010000257.1 Protein Homology CDS 36543 37802 . - 0 ID=cds-WP_224052505.1;Parent=gene-LDO49_RS26200;Dbxref=GenBank:WP_224052505.1;Name=WP_224052505.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334723.1;locus_tag=LDO49_RS26200;product=HlyD family secretion protein;protein_id=WP_224052505.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 37799 39157 . - . ID=gene-LDO49_RS26205;Name=LDO49_RS26205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26205;old_locus_tag=BCEP4_50042 NZ_CAJZAV010000257.1 Protein Homology CDS 37799 39157 . - 0 ID=cds-WP_224052506.1;Parent=gene-LDO49_RS26205;Dbxref=GenBank:WP_224052506.1;Name=WP_224052506.1;Ontology_term=GO:0055085,GO:0015562,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750423.1;locus_tag=LDO49_RS26205;product=TolC family outer membrane protein;protein_id=WP_224052506.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 39669 40451 . - . ID=gene-LDO49_RS26210;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=LDO49_RS26210;old_locus_tag=BCEP4_50043 NZ_CAJZAV010000257.1 Protein Homology CDS 39669 40451 . - 0 ID=cds-WP_048024008.1;Parent=gene-LDO49_RS26210;Dbxref=GenBank:WP_048024008.1;Name=WP_048024008.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491278.1;locus_tag=LDO49_RS26210;product=flagellar biosynthetic protein FliR;protein_id=WP_048024008.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 40477 40749 . - . ID=gene-LDO49_RS26215;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=LDO49_RS26215;old_locus_tag=BCEP4_50044 NZ_CAJZAV010000257.1 Protein Homology CDS 40477 40749 . - 0 ID=cds-WP_224052507.1;Parent=gene-LDO49_RS26215;Dbxref=GenBank:WP_224052507.1;Name=WP_224052507.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199882.1;locus_tag=LDO49_RS26215;product=flagellar biosynthesis protein FliQ;protein_id=WP_224052507.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 40769 41530 . - . ID=gene-LDO49_RS26220;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=LDO49_RS26220;old_locus_tag=BCEP4_50045 NZ_CAJZAV010000257.1 Protein Homology CDS 40769 41530 . - 0 ID=cds-WP_027788754.1;Parent=gene-LDO49_RS26220;Dbxref=GenBank:WP_027788754.1;Name=WP_027788754.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011325008.1;locus_tag=LDO49_RS26220;product=flagellar type III secretion system pore protein FliP;protein_id=WP_027788754.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 41567 42139 . - . ID=gene-LDO49_RS26225;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=LDO49_RS26225;old_locus_tag=BCEP4_50046 NZ_CAJZAV010000257.1 Protein Homology CDS 41567 42139 . - 0 ID=cds-WP_048024007.1;Parent=gene-LDO49_RS26225;Dbxref=GenBank:WP_048024007.1;Name=WP_048024007.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495402.1;locus_tag=LDO49_RS26225;product=flagellar biosynthetic protein FliO;protein_id=WP_048024007.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 42136 42627 . - . ID=gene-LDO49_RS26230;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=LDO49_RS26230;old_locus_tag=BCEP4_50047 NZ_CAJZAV010000257.1 Protein Homology CDS 42136 42627 . - 0 ID=cds-WP_021162235.1;Parent=gene-LDO49_RS26230;Dbxref=GenBank:WP_021162235.1;Name=WP_021162235.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407291.1;locus_tag=LDO49_RS26230;product=flagellar motor switch protein FliN;protein_id=WP_021162235.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 42620 43618 . - . ID=gene-LDO49_RS26235;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=LDO49_RS26235;old_locus_tag=BCEP4_50048 NZ_CAJZAV010000257.1 Protein Homology CDS 42620 43618 . - 0 ID=cds-WP_021162234.1;Parent=gene-LDO49_RS26235;Dbxref=GenBank:WP_021162234.1;Name=WP_021162234.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524547.1;locus_tag=LDO49_RS26235;product=flagellar motor switch protein FliM;protein_id=WP_021162234.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 43641 44177 . - . ID=gene-LDO49_RS26240;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=LDO49_RS26240;old_locus_tag=BCEP4_50049 NZ_CAJZAV010000257.1 Protein Homology CDS 43641 44177 . - 0 ID=cds-WP_048024006.1;Parent=gene-LDO49_RS26240;Dbxref=GenBank:WP_048024006.1;Name=WP_048024006.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750432.1;locus_tag=LDO49_RS26240;product=flagellar basal body-associated protein FliL;protein_id=WP_048024006.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 44375 45097 . - . ID=gene-LDO49_RS26245;Name=LDO49_RS26245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26245;old_locus_tag=BCEP4_50050 NZ_CAJZAV010000257.1 Protein Homology CDS 44375 45097 . - 0 ID=cds-WP_048024005.1;Parent=gene-LDO49_RS26245;Dbxref=GenBank:WP_048024005.1;Name=WP_048024005.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895445.1;locus_tag=LDO49_RS26245;product=LrgB family protein;protein_id=WP_048024005.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 45111 45587 . - . ID=gene-LDO49_RS26250;Name=LDO49_RS26250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26250;old_locus_tag=BCEP4_50051 NZ_CAJZAV010000257.1 Protein Homology CDS 45111 45587 . - 0 ID=cds-WP_224052508.1;Parent=gene-LDO49_RS26250;Dbxref=GenBank:WP_224052508.1;Name=WP_224052508.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757442.1;locus_tag=LDO49_RS26250;product=CidA/LrgA family protein;protein_id=WP_224052508.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 45728 46654 . + . ID=gene-LDO49_RS26255;Name=LDO49_RS26255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26255;old_locus_tag=BCEP4_50052 NZ_CAJZAV010000257.1 Protein Homology CDS 45728 46654 . + 0 ID=cds-WP_021162230.1;Parent=gene-LDO49_RS26255;Dbxref=GenBank:WP_021162230.1;Name=WP_021162230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004546082.1;locus_tag=LDO49_RS26255;product=LysR family transcriptional regulator;protein_id=WP_021162230.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq pseudogene 46681 47064 . - . ID=gene-LDO49_RS26260;Name=LDO49_RS26260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS26260;partial=true;pseudo=true;start_range=.,46681 NZ_CAJZAV010000257.1 Protein Homology CDS 46681 47064 . - 0 ID=cds-LDO49_RS26260;Parent=gene-LDO49_RS26260;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004540,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=RNA nuclease activity|0004540||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477237.1;locus_tag=LDO49_RS26260;partial=true;product=type II toxin-antitoxin system VapC family toxin;pseudo=true;start_range=.,46681;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 47061 47294 . - . ID=gene-LDO49_RS26265;Name=LDO49_RS26265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26265;old_locus_tag=BCEP4_50054 NZ_CAJZAV010000257.1 Protein Homology CDS 47061 47294 . - 0 ID=cds-WP_060073632.1;Parent=gene-LDO49_RS26265;Dbxref=GenBank:WP_060073632.1;Name=WP_060073632.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477238.1;locus_tag=LDO49_RS26265;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_060073632.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 47408 48970 . - . ID=gene-LDO49_RS26270;Name=LDO49_RS26270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26270;old_locus_tag=BCEP4_50056 NZ_CAJZAV010000257.1 Protein Homology CDS 47408 48970 . - 0 ID=cds-WP_021162228.1;Parent=gene-LDO49_RS26270;Dbxref=GenBank:WP_021162228.1;Name=WP_021162228.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416603.1;locus_tag=LDO49_RS26270;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_021162228.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 49149 49640 . - . ID=gene-LDO49_RS26275;Name=LDO49_RS26275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26275;old_locus_tag=BCEP4_50058 NZ_CAJZAV010000257.1 Protein Homology CDS 49149 49640 . - 0 ID=cds-WP_027788745.1;Parent=gene-LDO49_RS26275;Dbxref=GenBank:WP_027788745.1;Name=WP_027788745.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544460.1;locus_tag=LDO49_RS26275;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_027788745.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 49815 50099 . + . ID=gene-LDO49_RS26280;Name=LDO49_RS26280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26280;old_locus_tag=BCEP4_50059 NZ_CAJZAV010000257.1 Protein Homology CDS 49815 50099 . + 0 ID=cds-WP_048023998.1;Parent=gene-LDO49_RS26280;Dbxref=GenBank:WP_048023998.1;Name=WP_048023998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750438.1;locus_tag=LDO49_RS26280;product=hypothetical protein;protein_id=WP_048023998.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 50385 51956 . + . ID=gene-LDO49_RS26285;Name=LDO49_RS26285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26285;old_locus_tag=BCEP4_50060 NZ_CAJZAV010000257.1 Protein Homology CDS 50385 51956 . + 0 ID=cds-WP_060073558.1;Parent=gene-LDO49_RS26285;Dbxref=GenBank:WP_060073558.1;Name=WP_060073558.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544458.1;locus_tag=LDO49_RS26285;product=efflux transporter outer membrane subunit;protein_id=WP_060073558.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 51979 52767 . - . ID=gene-LDO49_RS26290;Name=LDO49_RS26290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26290;old_locus_tag=BCEP4_50061 NZ_CAJZAV010000257.1 Protein Homology CDS 51979 52767 . - 0 ID=cds-WP_060073560.1;Parent=gene-LDO49_RS26290;Dbxref=GenBank:WP_060073560.1;Name=WP_060073560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750440.1;locus_tag=LDO49_RS26290;product=type II secretion system protein N;protein_id=WP_060073560.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 52799 53305 . - . ID=gene-LDO49_RS26295;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;locus_tag=LDO49_RS26295;old_locus_tag=BCEP4_50062 NZ_CAJZAV010000257.1 Protein Homology CDS 52799 53305 . - 0 ID=cds-WP_021162223.1;Parent=gene-LDO49_RS26295;Dbxref=GenBank:WP_021162223.1;Name=WP_021162223.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspM;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411158.1;locus_tag=LDO49_RS26295;product=type II secretion system protein GspM;protein_id=WP_021162223.1;transl_table=11 NZ_CAJZAV010000257.1 RefSeq gene 53302 53846 . - . ID=gene-LDO49_RS26300;Name=gspL;end_range=53846,.;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=LDO49_RS26300;old_locus_tag=BCEP4_50063;partial=true NZ_CAJZAV010000257.1 Protein Homology CDS 53302 53846 . - 2 ID=cds-WP_224052509.1;Parent=gene-LDO49_RS26300;Dbxref=GenBank:WP_224052509.1;Name=WP_224052509.1;Ontology_term=GO:0015628,GO:0009276,GO:0015627;end_range=53846,.;gbkey=CDS;gene=gspL;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533517.1;locus_tag=LDO49_RS26300;partial=true;product=type II secretion system protein GspL;protein_id=WP_224052509.1;transl_table=11 ##sequence-region NZ_CAJZAV010000258.1 1 64972 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000258.1 RefSeq region 1 64972 . + . ID=NZ_CAJZAV010000258.1:1..64972;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_50 NZ_CAJZAV010000258.1 RefSeq gene 1 846 . - . ID=gene-LDO49_RS26305;Name=LDO49_RS26305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26305;partial=true;start_range=.,1 NZ_CAJZAV010000258.1 Protein Homology CDS 1 846 . - 0 ID=cds-WP_224052511.1;Parent=gene-LDO49_RS26305;Dbxref=GenBank:WP_224052511.1;Name=WP_224052511.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366420.1;locus_tag=LDO49_RS26305;partial=true;product=TolC family protein;protein_id=WP_224052511.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 843 4034 . - . ID=gene-LDO49_RS26310;Name=LDO49_RS26310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26310;old_locus_tag=BCEP4_500002 NZ_CAJZAV010000258.1 Protein Homology CDS 843 4034 . - 0 ID=cds-WP_060147470.1;Parent=gene-LDO49_RS26310;Dbxref=GenBank:WP_060147470.1;Name=WP_060147470.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337059.1;locus_tag=LDO49_RS26310;product=efflux RND transporter permease subunit;protein_id=WP_060147470.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 4031 5230 . - . ID=gene-LDO49_RS26315;Name=LDO49_RS26315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26315;old_locus_tag=BCEP4_500003 NZ_CAJZAV010000258.1 Protein Homology CDS 4031 5230 . - 0 ID=cds-WP_060147471.1;Parent=gene-LDO49_RS26315;Dbxref=GenBank:WP_060147471.1;Name=WP_060147471.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497955.1;locus_tag=LDO49_RS26315;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_060147471.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 5526 5870 . - . ID=gene-LDO49_RS26320;Name=LDO49_RS26320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26320;old_locus_tag=BCEP4_500004 NZ_CAJZAV010000258.1 Protein Homology CDS 5526 5870 . - 0 ID=cds-WP_021160205.1;Parent=gene-LDO49_RS26320;Dbxref=GenBank:WP_021160205.1;Name=WP_021160205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485188.1;locus_tag=LDO49_RS26320;product=DUF4148 domain-containing protein;protein_id=WP_021160205.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 6192 7211 . + . ID=gene-LDO49_RS26325;Name=LDO49_RS26325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26325;old_locus_tag=BCEP4_500005 NZ_CAJZAV010000258.1 Protein Homology CDS 6192 7211 . + 0 ID=cds-WP_059492476.1;Parent=gene-LDO49_RS26325;Dbxref=GenBank:WP_059492476.1;Name=WP_059492476.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337056.1;locus_tag=LDO49_RS26325;product=aldo/keto reductase;protein_id=WP_059492476.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 7241 7657 . + . ID=gene-LDO49_RS26330;Name=LDO49_RS26330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26330;old_locus_tag=BCEP4_500006 NZ_CAJZAV010000258.1 Protein Homology CDS 7241 7657 . + 0 ID=cds-WP_060147473.1;Parent=gene-LDO49_RS26330;Dbxref=GenBank:WP_060147473.1;Name=WP_060147473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481127.1;locus_tag=LDO49_RS26330;product=SRPBCC family protein;protein_id=WP_060147473.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 7819 8730 . - . ID=gene-LDO49_RS26335;Name=LDO49_RS26335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26335;old_locus_tag=BCEP4_500007 NZ_CAJZAV010000258.1 Protein Homology CDS 7819 8730 . - 0 ID=cds-WP_021160208.1;Parent=gene-LDO49_RS26335;Dbxref=GenBank:WP_021160208.1;Name=WP_021160208.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549250.1;locus_tag=LDO49_RS26335;product=LysR family transcriptional regulator;protein_id=WP_021160208.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq pseudogene 8832 8942 . + . ID=gene-LDO49_RS26340;Name=LDO49_RS26340;end_range=8942,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS26340;partial=true;pseudo=true NZ_CAJZAV010000258.1 Protein Homology CDS 8832 8942 . + 0 ID=cds-LDO49_RS26340;Parent=gene-LDO49_RS26340;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=8942,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012356119.1;locus_tag=LDO49_RS26340;partial=true;product=aldo/keto reductase;pseudo=true;transl_table=11 NZ_CAJZAV010000258.1 RefSeq pseudogene 9050 9232 . + . ID=gene-LDO49_RS26345;Name=LDO49_RS26345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS26345;old_locus_tag=BCEP4_500009;partial=true;pseudo=true;start_range=.,9050 NZ_CAJZAV010000258.1 Protein Homology CDS 9050 9232 . + 0 ID=cds-LDO49_RS26345;Parent=gene-LDO49_RS26345;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218326.1;locus_tag=LDO49_RS26345;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,9050;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 9318 11354 . - . ID=gene-LDO49_RS26350;Name=shc;gbkey=Gene;gene=shc;gene_biotype=protein_coding;locus_tag=LDO49_RS26350;old_locus_tag=BCEP4_500010 NZ_CAJZAV010000258.1 Protein Homology CDS 9318 11354 . - 0 ID=cds-WP_224052512.1;Parent=gene-LDO49_RS26350;Dbxref=GenBank:WP_224052512.1;Name=WP_224052512.1;Ontology_term=GO:0019746,GO:0016866,GO:0051007;gbkey=CDS;gene=shc;go_function=intramolecular transferase activity|0016866||IEA,squalene-hopene cyclase activity|0051007||IEA;go_process=hopanoid biosynthetic process|0019746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750607.1;locus_tag=LDO49_RS26350;product=squalene--hopene cyclase;protein_id=WP_224052512.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 11407 12108 . + . ID=gene-LDO49_RS26355;Name=LDO49_RS26355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26355;old_locus_tag=BCEP4_500011 NZ_CAJZAV010000258.1 Protein Homology CDS 11407 12108 . + 0 ID=cds-WP_059678188.1;Parent=gene-LDO49_RS26355;Dbxref=GenBank:WP_059678188.1;Name=WP_059678188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750608.1;locus_tag=LDO49_RS26355;product=TetR/AcrR family transcriptional regulator;protein_id=WP_059678188.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 12167 13135 . - . ID=gene-LDO49_RS26360;Name=LDO49_RS26360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26360;old_locus_tag=BCEP4_500012 NZ_CAJZAV010000258.1 Protein Homology CDS 12167 13135 . - 0 ID=cds-WP_224052513.1;Parent=gene-LDO49_RS26360;Dbxref=GenBank:WP_224052513.1;Name=WP_224052513.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024578.6;locus_tag=LDO49_RS26360;product=PDZ domain-containing protein;protein_id=WP_224052513.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 13383 13928 . + . ID=gene-LDO49_RS26365;Name=LDO49_RS26365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26365;old_locus_tag=BCEP4_500014 NZ_CAJZAV010000258.1 Protein Homology CDS 13383 13928 . + 0 ID=cds-WP_224052514.1;Parent=gene-LDO49_RS26365;Dbxref=GenBank:WP_224052514.1;Name=WP_224052514.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350203.1;locus_tag=LDO49_RS26365;product=AAA family ATPase;protein_id=WP_224052514.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 14079 14489 . + . ID=gene-LDO49_RS26370;Name=LDO49_RS26370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26370;old_locus_tag=BCEP4_500015 NZ_CAJZAV010000258.1 Protein Homology CDS 14079 14489 . + 0 ID=cds-WP_224052515.1;Parent=gene-LDO49_RS26370;Dbxref=GenBank:WP_224052515.1;Name=WP_224052515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350197.1;locus_tag=LDO49_RS26370;product=VOC family protein;protein_id=WP_224052515.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 14790 16355 . + . ID=gene-LDO49_RS26375;Name=LDO49_RS26375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26375;old_locus_tag=BCEP4_500016 NZ_CAJZAV010000258.1 Protein Homology CDS 14790 16355 . + 0 ID=cds-WP_224052516.1;Parent=gene-LDO49_RS26375;Dbxref=GenBank:WP_224052516.1;Name=WP_224052516.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337037.1;locus_tag=LDO49_RS26375;product=methyl-accepting chemotaxis protein;protein_id=WP_224052516.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 16839 17369 . + . ID=gene-LDO49_RS26380;Name=LDO49_RS26380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26380;old_locus_tag=BCEP4_500017 NZ_CAJZAV010000258.1 Protein Homology CDS 16839 17369 . + 0 ID=cds-WP_021160217.1;Parent=gene-LDO49_RS26380;Dbxref=GenBank:WP_021160217.1;Name=WP_021160217.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498228.1;locus_tag=LDO49_RS26380;product=OsmC family protein;protein_id=WP_021160217.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 17856 19259 . - . ID=gene-LDO49_RS26385;Name=LDO49_RS26385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26385;old_locus_tag=BCEP4_500018 NZ_CAJZAV010000258.1 Protein Homology CDS 17856 19259 . - 0 ID=cds-WP_224052517.1;Parent=gene-LDO49_RS26385;Dbxref=GenBank:WP_224052517.1;Name=WP_224052517.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350188.1;locus_tag=LDO49_RS26385;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_224052517.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 19256 20539 . - . ID=gene-LDO49_RS26390;Name=LDO49_RS26390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26390;old_locus_tag=BCEP4_500019 NZ_CAJZAV010000258.1 Protein Homology CDS 19256 20539 . - 0 ID=cds-WP_224052518.1;Parent=gene-LDO49_RS26390;Dbxref=GenBank:WP_224052518.1;Name=WP_224052518.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549908.1;locus_tag=LDO49_RS26390;product=acyl-CoA dehydrogenase family protein;protein_id=WP_224052518.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 20833 22071 . + . ID=gene-LDO49_RS26395;Name=LDO49_RS26395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26395;old_locus_tag=BCEP4_500021 NZ_CAJZAV010000258.1 Protein Homology CDS 20833 22071 . + 0 ID=cds-WP_059586026.1;Parent=gene-LDO49_RS26395;Dbxref=GenBank:WP_059586026.1;Name=WP_059586026.1;Ontology_term=GO:0006790,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412816.1;locus_tag=LDO49_RS26395;product=SfnB family sulfur acquisition oxidoreductase;protein_id=WP_059586026.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 22271 22915 . + . ID=gene-LDO49_RS26400;Name=LDO49_RS26400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26400;old_locus_tag=BCEP4_500022 NZ_CAJZAV010000258.1 Protein Homology CDS 22271 22915 . + 0 ID=cds-WP_224052519.1;Parent=gene-LDO49_RS26400;Dbxref=GenBank:WP_224052519.1;Name=WP_224052519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350184.1;locus_tag=LDO49_RS26400;product=HD domain-containing protein;protein_id=WP_224052519.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 23221 24201 . - . ID=gene-LDO49_RS26405;Name=LDO49_RS26405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26405;old_locus_tag=BCEP4_500023 NZ_CAJZAV010000258.1 Protein Homology CDS 23221 24201 . - 0 ID=cds-WP_059710095.1;Parent=gene-LDO49_RS26405;Dbxref=GenBank:WP_059710095.1;Name=WP_059710095.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350168.1;locus_tag=LDO49_RS26405;product=helix-turn-helix transcriptional regulator;protein_id=WP_059710095.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 24374 25093 . + . ID=gene-LDO49_RS26410;Name=LDO49_RS26410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26410;old_locus_tag=BCEP4_500024 NZ_CAJZAV010000258.1 Protein Homology CDS 24374 25093 . + 0 ID=cds-WP_060147486.1;Parent=gene-LDO49_RS26410;Dbxref=GenBank:WP_060147486.1;Name=WP_060147486.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754675.1;locus_tag=LDO49_RS26410;product=glutathione S-transferase family protein;protein_id=WP_060147486.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq pseudogene 25118 25452 . - . ID=gene-LDO49_RS26415;Name=LDO49_RS26415;end_range=25452,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS26415;old_locus_tag=BCEP4_500025;partial=true;pseudo=true NZ_CAJZAV010000258.1 Protein Homology CDS 25118 25452 . - 0 ID=cds-LDO49_RS26415;Parent=gene-LDO49_RS26415;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=25452,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404907.1;locus_tag=LDO49_RS26415;partial=true;product=alpha/beta fold hydrolase;pseudo=true;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 25592 26509 . + . ID=gene-LDO49_RS26420;Name=LDO49_RS26420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26420;old_locus_tag=BCEP4_500026 NZ_CAJZAV010000258.1 Protein Homology CDS 25592 26509 . + 0 ID=cds-WP_059585968.1;Parent=gene-LDO49_RS26420;Dbxref=GenBank:WP_059585968.1;Name=WP_059585968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483364.1;locus_tag=LDO49_RS26420;product=acetoacetate decarboxylase family protein;protein_id=WP_059585968.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 26567 27811 . + . ID=gene-LDO49_RS26425;Name=LDO49_RS26425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26425;old_locus_tag=BCEP4_500027 NZ_CAJZAV010000258.1 Protein Homology CDS 26567 27811 . + 0 ID=cds-WP_060147487.1;Parent=gene-LDO49_RS26425;Dbxref=GenBank:WP_060147487.1;Name=WP_060147487.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497984.1;locus_tag=LDO49_RS26425;product=saccharopine dehydrogenase family protein;protein_id=WP_060147487.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 27939 28448 . + . ID=gene-LDO49_RS26430;Name=LDO49_RS26430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26430;old_locus_tag=BCEP4_500028 NZ_CAJZAV010000258.1 Protein Homology CDS 27939 28448 . + 0 ID=cds-WP_124475491.1;Parent=gene-LDO49_RS26430;Dbxref=GenBank:WP_124475491.1;Name=WP_124475491.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020723117.1;locus_tag=LDO49_RS26430;product=MerR family transcriptional regulator;protein_id=WP_124475491.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 28452 29177 . - . ID=gene-LDO49_RS26435;Name=LDO49_RS26435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26435;old_locus_tag=BCEP4_500029 NZ_CAJZAV010000258.1 Protein Homology CDS 28452 29177 . - 0 ID=cds-WP_224052520.1;Parent=gene-LDO49_RS26435;Dbxref=GenBank:WP_224052520.1;Name=WP_224052520.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549225.1;locus_tag=LDO49_RS26435;product=TetR/AcrR family transcriptional regulator;protein_id=WP_224052520.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 29223 29474 . + . ID=gene-LDO49_RS26440;Name=LDO49_RS26440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26440;old_locus_tag=BCEP4_500031 NZ_CAJZAV010000258.1 GeneMarkS-2+ CDS 29223 29474 . + 0 ID=cds-WP_224052534.1;Parent=gene-LDO49_RS26440;Dbxref=GenBank:WP_224052534.1;Name=WP_224052534.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS26440;product=hypothetical protein;protein_id=WP_224052534.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 29549 30697 . + . ID=gene-LDO49_RS26445;Name=LDO49_RS26445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26445;old_locus_tag=BCEP4_500030 NZ_CAJZAV010000258.1 Protein Homology CDS 29549 30697 . + 0 ID=cds-WP_253074691.1;Parent=gene-LDO49_RS26445;Dbxref=GenBank:WP_253074691.1;Name=WP_253074691.1;Ontology_term=GO:0006081,GO:0050269;gbkey=CDS;go_function=coniferyl-aldehyde dehydrogenase [NAD(P)+] activity|0050269||IEA;go_process=aldehyde metabolic process|0006081||IEA;inference=COORDINATES: protein motif:HMM:NF012398.6;locus_tag=LDO49_RS26445;product=coniferyl aldehyde dehydrogenase;protein_id=WP_253074691.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 30718 31596 . - . ID=gene-LDO49_RS26450;Name=LDO49_RS26450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26450;old_locus_tag=BCEP4_500032 NZ_CAJZAV010000258.1 Protein Homology CDS 30718 31596 . - 0 ID=cds-WP_060147490.1;Parent=gene-LDO49_RS26450;Dbxref=GenBank:WP_060147490.1;Name=WP_060147490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350158.1;locus_tag=LDO49_RS26450;product=LysR substrate-binding domain-containing protein;protein_id=WP_060147490.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 31729 32361 . + . ID=gene-LDO49_RS26455;Name=LDO49_RS26455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26455;old_locus_tag=BCEP4_500033 NZ_CAJZAV010000258.1 Protein Homology CDS 31729 32361 . + 0 ID=cds-WP_060147491.1;Parent=gene-LDO49_RS26455;Dbxref=GenBank:WP_060147491.1;Name=WP_060147491.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0016491,GO:0050136,GO:0050446;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483359.1;locus_tag=LDO49_RS26455;product=FMN-dependent NADH-azoreductase;protein_id=WP_060147491.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 32455 33072 . - . ID=gene-LDO49_RS26460;Name=LDO49_RS26460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26460;old_locus_tag=BCEP4_500034 NZ_CAJZAV010000258.1 Protein Homology CDS 32455 33072 . - 0 ID=cds-WP_059555102.1;Parent=gene-LDO49_RS26460;Dbxref=GenBank:WP_059555102.1;Name=WP_059555102.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337031.1;locus_tag=LDO49_RS26460;product=LysE family translocator;protein_id=WP_059555102.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 33140 34063 . + . ID=gene-LDO49_RS26465;Name=LDO49_RS26465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26465;old_locus_tag=BCEP4_500035 NZ_CAJZAV010000258.1 Protein Homology CDS 33140 34063 . + 0 ID=cds-WP_124842625.1;Parent=gene-LDO49_RS26465;Dbxref=GenBank:WP_124842625.1;Name=WP_124842625.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754677.1;locus_tag=LDO49_RS26465;product=LysR family transcriptional regulator;protein_id=WP_124842625.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 34455 35063 . - . ID=gene-LDO49_RS26470;Name=LDO49_RS26470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26470;old_locus_tag=BCEP4_500037 NZ_CAJZAV010000258.1 Protein Homology CDS 34455 35063 . - 0 ID=cds-WP_124842627.1;Parent=gene-LDO49_RS26470;Dbxref=GenBank:WP_124842627.1;Name=WP_124842627.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549033.1;locus_tag=LDO49_RS26470;product=short chain dehydrogenase;protein_id=WP_124842627.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 35170 36054 . + . ID=gene-LDO49_RS26475;Name=LDO49_RS26475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26475;old_locus_tag=BCEP4_500039 NZ_CAJZAV010000258.1 Protein Homology CDS 35170 36054 . + 0 ID=cds-WP_124842629.1;Parent=gene-LDO49_RS26475;Dbxref=GenBank:WP_124842629.1;Name=WP_124842629.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013210888.1;locus_tag=LDO49_RS26475;product=LysR family transcriptional regulator;protein_id=WP_124842629.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 36278 36904 . - . ID=gene-LDO49_RS26480;Name=LDO49_RS26480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26480;old_locus_tag=BCEP4_500040 NZ_CAJZAV010000258.1 Protein Homology CDS 36278 36904 . - 0 ID=cds-WP_124842631.1;Parent=gene-LDO49_RS26480;Dbxref=GenBank:WP_124842631.1;Name=WP_124842631.1;Ontology_term=GO:0016491,GO:0016651,GO:0052851,GO:0070967;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,ferric-chelate reductase (NADPH) activity|0052851||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: protein motif:HMM:NF015411.6;locus_tag=LDO49_RS26480;product=NADPH-dependent F420 reductase;protein_id=WP_124842631.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 36986 37366 . + . ID=gene-LDO49_RS26485;Name=LDO49_RS26485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26485;old_locus_tag=BCEP4_500041 NZ_CAJZAV010000258.1 Protein Homology CDS 36986 37366 . + 0 ID=cds-WP_060147495.1;Parent=gene-LDO49_RS26485;Dbxref=GenBank:WP_060147495.1;Name=WP_060147495.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012426402.1;locus_tag=LDO49_RS26485;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_060147495.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 37991 39250 . + . ID=gene-LDO49_RS26490;Name=LDO49_RS26490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26490;old_locus_tag=BCEP4_500044 NZ_CAJZAV010000258.1 Protein Homology CDS 37991 39250 . + 0 ID=cds-WP_059489390.1;Parent=gene-LDO49_RS26490;Dbxref=GenBank:WP_059489390.1;Name=WP_059489390.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007731738.1;locus_tag=LDO49_RS26490;product=MFS transporter;protein_id=WP_059489390.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 39270 40328 . + . ID=gene-LDO49_RS26495;Name=LDO49_RS26495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26495;old_locus_tag=BCEP4_500045 NZ_CAJZAV010000258.1 Protein Homology CDS 39270 40328 . + 0 ID=cds-WP_063802665.1;Parent=gene-LDO49_RS26495;Dbxref=GenBank:WP_063802665.1;Name=WP_063802665.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: protein motif:HMM:NF024996.6;locus_tag=LDO49_RS26495;product=porin;protein_id=WP_063802665.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 40364 41410 . + . ID=gene-LDO49_RS26500;Name=LDO49_RS26500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26500;old_locus_tag=BCEP4_500046 NZ_CAJZAV010000258.1 Protein Homology CDS 40364 41410 . + 0 ID=cds-WP_063802666.1;Parent=gene-LDO49_RS26500;Dbxref=GenBank:WP_063802666.1;Name=WP_063802666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013541797.1;locus_tag=LDO49_RS26500;product=carbon-nitrogen hydrolase family protein;protein_id=WP_063802666.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 41392 42360 . - . ID=gene-LDO49_RS26505;Name=LDO49_RS26505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26505;old_locus_tag=BCEP4_500047 NZ_CAJZAV010000258.1 Protein Homology CDS 41392 42360 . - 0 ID=cds-WP_081079483.1;Parent=gene-LDO49_RS26505;Dbxref=GenBank:WP_081079483.1;Name=WP_081079483.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF025878.6;locus_tag=LDO49_RS26505;product=AraC family transcriptional regulator;protein_id=WP_081079483.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 43119 44066 . - . ID=gene-LDO49_RS26515;Name=LDO49_RS26515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26515;old_locus_tag=BCEP4_500050 NZ_CAJZAV010000258.1 Protein Homology CDS 43119 44066 . - 0 ID=cds-WP_060147499.1;Parent=gene-LDO49_RS26515;Dbxref=GenBank:WP_060147499.1;Name=WP_060147499.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019572430.1;locus_tag=LDO49_RS26515;product=ketopantoate reductase family protein;protein_id=WP_060147499.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq pseudogene 44077 44337 . - . ID=gene-LDO49_RS26520;Name=LDO49_RS26520;end_range=44337,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS26520;old_locus_tag=BCEP4_500051;partial=true;pseudo=true NZ_CAJZAV010000258.1 Protein Homology CDS 44077 44337 . - 0 ID=cds-LDO49_RS26520;Parent=gene-LDO49_RS26520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016491;end_range=44337,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601129.1;locus_tag=LDO49_RS26520;partial=true;product=aldehyde dehydrogenase family protein;pseudo=true;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 45283 45915 . - . ID=gene-LDO49_RS26530;Name=LDO49_RS26530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26530 NZ_CAJZAV010000258.1 Protein Homology CDS 45283 45915 . - 0 ID=cds-WP_308044039.1;Parent=gene-LDO49_RS26530;Dbxref=GenBank:WP_308044039.1;Name=WP_308044039.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024952.6;locus_tag=LDO49_RS26530;product=2'-5' RNA ligase family protein;protein_id=WP_308044039.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 46132 47037 . - . ID=gene-LDO49_RS26535;Name=LDO49_RS26535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26535;old_locus_tag=BCEP4_500054 NZ_CAJZAV010000258.1 Protein Homology CDS 46132 47037 . - 0 ID=cds-WP_021160247.1;Parent=gene-LDO49_RS26535;Dbxref=GenBank:WP_021160247.1;Name=WP_021160247.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337044.1;locus_tag=LDO49_RS26535;product=LysR family transcriptional regulator;protein_id=WP_021160247.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 47156 47746 . + . ID=gene-LDO49_RS26540;Name=LDO49_RS26540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26540;old_locus_tag=BCEP4_500055 NZ_CAJZAV010000258.1 Protein Homology CDS 47156 47746 . + 0 ID=cds-WP_021160248.1;Parent=gene-LDO49_RS26540;Dbxref=GenBank:WP_021160248.1;Name=WP_021160248.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549239.1;locus_tag=LDO49_RS26540;product=flavodoxin family protein;protein_id=WP_021160248.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 47829 48884 . + . ID=gene-LDO49_RS26545;Name=LDO49_RS26545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26545;old_locus_tag=BCEP4_500056 NZ_CAJZAV010000258.1 Protein Homology CDS 47829 48884 . + 0 ID=cds-WP_224052521.1;Parent=gene-LDO49_RS26545;Dbxref=GenBank:WP_224052521.1;Name=WP_224052521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549240.1;locus_tag=LDO49_RS26545;product=aldo/keto reductase;protein_id=WP_224052521.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 48979 49269 . + . ID=gene-LDO49_RS26550;Name=LDO49_RS26550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26550;old_locus_tag=BCEP4_500057 NZ_CAJZAV010000258.1 Protein Homology CDS 48979 49269 . + 0 ID=cds-WP_059585985.1;Parent=gene-LDO49_RS26550;Dbxref=GenBank:WP_059585985.1;Name=WP_059585985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006050090.1;locus_tag=LDO49_RS26550;product=DUF1330 domain-containing protein;protein_id=WP_059585985.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 49412 50440 . - . ID=gene-LDO49_RS26555;Name=LDO49_RS26555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26555;old_locus_tag=BCEP4_500058 NZ_CAJZAV010000258.1 Protein Homology CDS 49412 50440 . - 0 ID=cds-WP_124842635.1;Parent=gene-LDO49_RS26555;Dbxref=GenBank:WP_124842635.1;Name=WP_124842635.1;Ontology_term=GO:0003960,GO:0048038,GO:0070402;gbkey=CDS;go_function=quinone reductase (NADPH) activity|0003960||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753231.1;locus_tag=LDO49_RS26555;product=NADPH:quinone reductase;protein_id=WP_124842635.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 50584 50937 . + . ID=gene-LDO49_RS26560;Name=LDO49_RS26560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26560;old_locus_tag=BCEP4_500059 NZ_CAJZAV010000258.1 Protein Homology CDS 50584 50937 . + 0 ID=cds-WP_059492449.1;Parent=gene-LDO49_RS26560;Dbxref=GenBank:WP_059492449.1;Name=WP_059492449.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012840283.1;locus_tag=LDO49_RS26560;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_059492449.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 51056 51478 . + . ID=gene-LDO49_RS26565;Name=LDO49_RS26565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26565;old_locus_tag=BCEP4_500060 NZ_CAJZAV010000258.1 Protein Homology CDS 51056 51478 . + 0 ID=cds-WP_224052522.1;Parent=gene-LDO49_RS26565;Dbxref=GenBank:WP_224052522.1;Name=WP_224052522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349950.1;locus_tag=LDO49_RS26565;product=hypothetical protein;protein_id=WP_224052522.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 51722 52789 . - . ID=gene-LDO49_RS26570;Name=LDO49_RS26570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26570;old_locus_tag=BCEP4_500061 NZ_CAJZAV010000258.1 Protein Homology CDS 51722 52789 . - 0 ID=cds-WP_372585873.1;Parent=gene-LDO49_RS26570;Dbxref=GenBank:WP_372585873.1;Name=WP_372585873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759877.1;locus_tag=LDO49_RS26570;product=hypothetical protein;protein_id=WP_372585873.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 52938 53153 . - . ID=gene-LDO49_RS26575;Name=LDO49_RS26575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26575 NZ_CAJZAV010000258.1 GeneMarkS-2+ CDS 52938 53153 . - 0 ID=cds-WP_224052524.1;Parent=gene-LDO49_RS26575;Dbxref=GenBank:WP_224052524.1;Name=WP_224052524.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS26575;product=hypothetical protein;protein_id=WP_224052524.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 54901 56067 . + . ID=gene-LDO49_RS26580;Name=LDO49_RS26580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26580;old_locus_tag=BCEP4_500065 NZ_CAJZAV010000258.1 Protein Homology CDS 54901 56067 . + 0 ID=cds-WP_042975541.1;Parent=gene-LDO49_RS26580;Dbxref=GenBank:WP_042975541.1;Name=WP_042975541.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485558.1;locus_tag=LDO49_RS26580;product=porin;protein_id=WP_042975541.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 56186 56476 . - . ID=gene-LDO49_RS26585;Name=LDO49_RS26585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26585 NZ_CAJZAV010000258.1 GeneMarkS-2+ CDS 56186 56476 . - 0 ID=cds-WP_224052525.1;Parent=gene-LDO49_RS26585;Dbxref=GenBank:WP_224052525.1;Name=WP_224052525.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS26585;product=hypothetical protein;protein_id=WP_224052525.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 56752 59265 . + . ID=gene-LDO49_RS26590;Name=LDO49_RS26590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26590;old_locus_tag=BCEP4_500068 NZ_CAJZAV010000258.1 Protein Homology CDS 56752 59265 . + 0 ID=cds-WP_224052526.1;Parent=gene-LDO49_RS26590;Dbxref=GenBank:WP_224052526.1;Name=WP_224052526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725636.1;locus_tag=LDO49_RS26590;product=EAL domain-containing protein;protein_id=WP_224052526.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 59286 60473 . - . ID=gene-LDO49_RS26595;Name=LDO49_RS26595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26595;old_locus_tag=BCEP4_500069 NZ_CAJZAV010000258.1 GeneMarkS-2+ CDS 59286 60473 . - 0 ID=cds-WP_224052527.1;Parent=gene-LDO49_RS26595;Dbxref=GenBank:WP_224052527.1;Name=WP_224052527.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS26595;product=hypothetical protein;protein_id=WP_224052527.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 60521 61015 . + . ID=gene-LDO49_RS26600;Name=LDO49_RS26600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26600 NZ_CAJZAV010000258.1 Protein Homology CDS 60521 61015 . + 0 ID=cds-WP_224052528.1;Parent=gene-LDO49_RS26600;Dbxref=GenBank:WP_224052528.1;Name=WP_224052528.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF012792.6;locus_tag=LDO49_RS26600;product=GNAT family N-acetyltransferase;protein_id=WP_224052528.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 61308 61868 . - . ID=gene-LDO49_RS26605;Name=LDO49_RS26605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26605;old_locus_tag=BCEP4_500071 NZ_CAJZAV010000258.1 Protein Homology CDS 61308 61868 . - 0 ID=cds-WP_224052533.1;Parent=gene-LDO49_RS26605;Dbxref=GenBank:WP_224052533.1;Name=WP_224052533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336670.1;locus_tag=LDO49_RS26605;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=WP_224052533.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 62331 63638 . - . ID=gene-LDO49_RS26610;Name=LDO49_RS26610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26610;old_locus_tag=BCEP4_500073 NZ_CAJZAV010000258.1 Protein Homology CDS 62331 63638 . - 0 ID=cds-WP_224052529.1;Parent=gene-LDO49_RS26610;Dbxref=GenBank:WP_224052529.1;Name=WP_224052529.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336672.1;locus_tag=LDO49_RS26610;product=MFS transporter;protein_id=WP_224052529.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq gene 63647 63892 . - . ID=gene-LDO49_RS26615;Name=LDO49_RS26615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26615;old_locus_tag=BCEP4_500074 NZ_CAJZAV010000258.1 Protein Homology CDS 63647 63892 . - 0 ID=cds-WP_253074693.1;Parent=gene-LDO49_RS26615;Dbxref=GenBank:WP_253074693.1;Name=WP_253074693.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: protein motif:HMM:NF014664.6;locus_tag=LDO49_RS26615;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_253074693.1;transl_table=11 NZ_CAJZAV010000258.1 RefSeq pseudogene 64311 64884 . + . ID=gene-LDO49_RS26620;Name=LDO49_RS26620;end_range=64884,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS26620;partial=true;pseudo=true NZ_CAJZAV010000258.1 Protein Homology CDS 64311 64884 . + 0 ID=cds-LDO49_RS26620;Parent=gene-LDO49_RS26620;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524;end_range=64884,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545467.1;locus_tag=LDO49_RS26620;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000259.1 1 102613 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000259.1 RefSeq region 1 102613 . + . ID=NZ_CAJZAV010000259.1:1..102613;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_51 NZ_CAJZAV010000259.1 RefSeq gene 763 2205 . + . ID=gene-LDO49_RS26625;Name=LDO49_RS26625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26625;old_locus_tag=BCEP4_510001 NZ_CAJZAV010000259.1 Protein Homology CDS 763 2205 . + 0 ID=cds-WP_060148184.1;Parent=gene-LDO49_RS26625;Dbxref=GenBank:WP_060148184.1;Name=WP_060148184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349764.1;locus_tag=LDO49_RS26625;product=sensor histidine kinase;protein_id=WP_060148184.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 2219 2692 . - . ID=gene-LDO49_RS26630;Name=LDO49_RS26630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26630;old_locus_tag=BCEP4_510002 NZ_CAJZAV010000259.1 Protein Homology CDS 2219 2692 . - 0 ID=cds-WP_021158078.1;Parent=gene-LDO49_RS26630;Dbxref=GenBank:WP_021158078.1;Name=WP_021158078.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018314448.1;locus_tag=LDO49_RS26630;product=acyl-CoA thioesterase;protein_id=WP_021158078.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 2937 3875 . + . ID=gene-LDO49_RS26635;Name=LDO49_RS26635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26635;old_locus_tag=BCEP4_510004 NZ_CAJZAV010000259.1 Protein Homology CDS 2937 3875 . + 0 ID=cds-WP_060148182.1;Parent=gene-LDO49_RS26635;Dbxref=GenBank:WP_060148182.1;Name=WP_060148182.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349766.1;locus_tag=LDO49_RS26635;product=response regulator;protein_id=WP_060148182.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 4026 4460 . - . ID=gene-LDO49_RS37440;Name=LDO49_RS37440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37440;old_locus_tag=BCEP4_510005 NZ_CAJZAV010000259.1 Protein Homology CDS 4026 4460 . - 0 ID=cds-WP_308044042.1;Parent=gene-LDO49_RS37440;Dbxref=GenBank:WP_308044042.1;Name=WP_308044042.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014691.6;locus_tag=LDO49_RS37440;product=Fic family protein;protein_id=WP_308044042.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 4696 5010 . + . ID=gene-LDO49_RS26645;Name=LDO49_RS26645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26645;old_locus_tag=BCEP4_510006 NZ_CAJZAV010000259.1 Protein Homology CDS 4696 5010 . + 0 ID=cds-WP_027792681.1;Parent=gene-LDO49_RS26645;Dbxref=GenBank:WP_027792681.1;Name=WP_027792681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481895.1;locus_tag=LDO49_RS26645;product=hypothetical protein;protein_id=WP_027792681.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 5190 5375 . - . ID=gene-LDO49_RS26650;Name=LDO49_RS26650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26650 NZ_CAJZAV010000259.1 Protein Homology CDS 5190 5375 . - 0 ID=cds-WP_059856008.1;Parent=gene-LDO49_RS26650;Dbxref=GenBank:WP_059856008.1;Name=WP_059856008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751151.1;locus_tag=LDO49_RS26650;product=hypothetical protein;protein_id=WP_059856008.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 5497 6525 . - . ID=gene-LDO49_RS26655;Name=LDO49_RS26655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26655;old_locus_tag=BCEP4_510008 NZ_CAJZAV010000259.1 GeneMarkS-2+ CDS 5497 6525 . - 0 ID=cds-WP_060148178.1;Parent=gene-LDO49_RS26655;Dbxref=GenBank:WP_060148178.1;Name=WP_060148178.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS26655;product=hypothetical protein;protein_id=WP_060148178.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq pseudogene 6800 7012 . - . ID=gene-LDO49_RS26660;Name=LDO49_RS26660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS26660;partial=true;pseudo=true;start_range=.,6800 NZ_CAJZAV010000259.1 Protein Homology CDS 6800 7012 . - 0 ID=cds-LDO49_RS26660;Parent=gene-LDO49_RS26660;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007182862.1;locus_tag=LDO49_RS26660;partial=true;product=transposase;pseudo=true;start_range=.,6800;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 7604 7846 . - . ID=gene-LDO49_RS26670;Name=LDO49_RS26670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26670;old_locus_tag=BCEP4_510012 NZ_CAJZAV010000259.1 Protein Homology CDS 7604 7846 . - 0 ID=cds-WP_060148176.1;Parent=gene-LDO49_RS26670;Dbxref=GenBank:WP_060148176.1;Name=WP_060148176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013093421.1;locus_tag=LDO49_RS26670;product=hypothetical protein;protein_id=WP_060148176.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 7914 8477 . - . ID=gene-LDO49_RS26675;Name=LDO49_RS26675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26675;old_locus_tag=BCEP4_510013 NZ_CAJZAV010000259.1 Protein Homology CDS 7914 8477 . - 0 ID=cds-WP_059675329.1;Parent=gene-LDO49_RS26675;Dbxref=GenBank:WP_059675329.1;Name=WP_059675329.1;Ontology_term=GO:0009408,GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759512.1;locus_tag=LDO49_RS26675;product=Hsp20/alpha crystallin family protein;protein_id=WP_059675329.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 8497 8667 . - . ID=gene-LDO49_RS26680;Name=LDO49_RS26680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26680;old_locus_tag=BCEP4_510014 NZ_CAJZAV010000259.1 GeneMarkS-2+ CDS 8497 8667 . - 0 ID=cds-WP_224052535.1;Parent=gene-LDO49_RS26680;Dbxref=GenBank:WP_224052535.1;Name=WP_224052535.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS26680;product=hypothetical protein;protein_id=WP_224052535.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 8820 9227 . - . ID=gene-LDO49_RS26685;Name=LDO49_RS26685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26685;old_locus_tag=BCEP4_510015 NZ_CAJZAV010000259.1 Protein Homology CDS 8820 9227 . - 0 ID=cds-WP_021158086.1;Parent=gene-LDO49_RS26685;Dbxref=GenBank:WP_021158086.1;Name=WP_021158086.1;Ontology_term=GO:0009408,GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015004229.1;locus_tag=LDO49_RS26685;product=Hsp20/alpha crystallin family protein;protein_id=WP_021158086.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 9243 9683 . - . ID=gene-LDO49_RS26690;Name=LDO49_RS26690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26690;old_locus_tag=BCEP4_510016 NZ_CAJZAV010000259.1 Protein Homology CDS 9243 9683 . - 0 ID=cds-WP_021158087.1;Parent=gene-LDO49_RS26690;Dbxref=GenBank:WP_021158087.1;Name=WP_021158087.1;Ontology_term=GO:0009408,GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751146.1;locus_tag=LDO49_RS26690;product=Hsp20/alpha crystallin family protein;protein_id=WP_021158087.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 9933 10316 . + . ID=gene-LDO49_RS26695;Name=LDO49_RS26695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26695;old_locus_tag=BCEP4_510017 NZ_CAJZAV010000259.1 Protein Homology CDS 9933 10316 . + 0 ID=cds-WP_048027708.1;Parent=gene-LDO49_RS26695;Dbxref=GenBank:WP_048027708.1;Name=WP_048027708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092699.1;locus_tag=LDO49_RS26695;product=hypothetical protein;protein_id=WP_048027708.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 10818 11732 . - . ID=gene-LDO49_RS26700;Name=LDO49_RS26700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26700;old_locus_tag=BCEP4_510018 NZ_CAJZAV010000259.1 Protein Homology CDS 10818 11732 . - 0 ID=cds-WP_060148174.1;Parent=gene-LDO49_RS26700;Dbxref=GenBank:WP_060148174.1;Name=WP_060148174.1;Ontology_term=GO:0006810,GO:0005215,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=transporter activity|0005215||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549110.1;locus_tag=LDO49_RS26700;product=ABC transporter ATP-binding protein;protein_id=WP_060148174.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 11778 12752 . - . ID=gene-LDO49_RS26705;Name=LDO49_RS26705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26705;old_locus_tag=BCEP4_510019 NZ_CAJZAV010000259.1 Protein Homology CDS 11778 12752 . - 0 ID=cds-WP_060148172.1;Parent=gene-LDO49_RS26705;Dbxref=GenBank:WP_060148172.1;Name=WP_060148172.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485545.1;locus_tag=LDO49_RS26705;product=ABC transporter permease;protein_id=WP_060148172.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 12817 14676 . - . ID=gene-LDO49_RS26710;Name=atzF;gbkey=Gene;gene=atzF;gene_biotype=protein_coding;locus_tag=LDO49_RS26710;old_locus_tag=BCEP4_510020 NZ_CAJZAV010000259.1 Protein Homology CDS 12817 14676 . - 0 ID=cds-WP_059648638.1;Parent=gene-LDO49_RS26710;Dbxref=GenBank:WP_059648638.1;Name=WP_059648638.1;Ontology_term=GO:0019627,GO:0004039;gbkey=CDS;gene=atzF;go_function=allophanate hydrolase activity|0004039||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498064.1;locus_tag=LDO49_RS26710;product=allophanate hydrolase;protein_id=WP_059648638.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 14673 18278 . - . ID=gene-LDO49_RS26715;Name=uca;gbkey=Gene;gene=uca;gene_biotype=protein_coding;locus_tag=LDO49_RS26715;old_locus_tag=BCEP4_510021 NZ_CAJZAV010000259.1 Protein Homology CDS 14673 18278 . - 0 ID=cds-WP_060148170.1;Parent=gene-LDO49_RS26715;Dbxref=GenBank:WP_060148170.1;Name=WP_060148170.1;Ontology_term=GO:0019627,GO:0004847;gbkey=CDS;gene=uca;go_function=urea carboxylase activity|0004847||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485552.1;locus_tag=LDO49_RS26715;product=urea carboxylase;protein_id=WP_060148170.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 18275 18931 . - . ID=gene-LDO49_RS26720;Name=LDO49_RS26720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26720;old_locus_tag=BCEP4_510022 NZ_CAJZAV010000259.1 Protein Homology CDS 18275 18931 . - 0 ID=cds-WP_027792692.1;Parent=gene-LDO49_RS26720;Dbxref=GenBank:WP_027792692.1;Name=WP_027792692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413541.1;locus_tag=LDO49_RS26720;product=urea amidolyase associated protein UAAP2;protein_id=WP_027792692.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 18943 19698 . - . ID=gene-LDO49_RS26725;Name=LDO49_RS26725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26725;old_locus_tag=BCEP4_510023 NZ_CAJZAV010000259.1 Protein Homology CDS 18943 19698 . - 0 ID=cds-WP_048027222.1;Parent=gene-LDO49_RS26725;Dbxref=GenBank:WP_048027222.1;Name=WP_048027222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485567.1;locus_tag=LDO49_RS26725;product=urea amidolyase associated protein UAAP1;protein_id=WP_048027222.1;transl_table=11 NZ_CAJZAV010000259.1 cmsearch riboswitch 19756 19889 . - . ID=id-NZ_CAJZAV010000259.1:19756..19889;Dbxref=RFAM:RF00442;Note=guanidine-I (ykkC/yxkD leader) riboswitch%3B Guanidine-I riboswitches control genes whose products are involved in modification or pumping out guanidine as a toxic compound from bacteria%3B This is class of guanidine riboswitches is based on the ykkC/yxkD leader.;bound_moiety=guanidine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAV010000259.1 cmsearch riboswitch 20324 20445 . + . ID=id-NZ_CAJZAV010000259.1:20324..20445;Dbxref=RFAM:RF00442;Note=guanidine-I (ykkC/yxkD leader) riboswitch%3B Guanidine-I riboswitches control genes whose products are involved in modification or pumping out guanidine as a toxic compound from bacteria%3B This is class of guanidine riboswitches is based on the ykkC/yxkD leader.;bound_moiety=guanidine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAV010000259.1 RefSeq gene 20584 21606 . + . ID=gene-LDO49_RS26730;Name=LDO49_RS26730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26730;old_locus_tag=BCEP4_510025 NZ_CAJZAV010000259.1 Protein Homology CDS 20584 21606 . + 0 ID=cds-WP_060088775.1;Parent=gene-LDO49_RS26730;Dbxref=GenBank:WP_060088775.1;Name=WP_060088775.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691317.1;locus_tag=LDO49_RS26730;product=ABC transporter substrate-binding protein;protein_id=WP_060088775.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 22032 24176 . + . ID=gene-LDO49_RS26735;Name=LDO49_RS26735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26735;old_locus_tag=BCEP4_510026 NZ_CAJZAV010000259.1 Protein Homology CDS 22032 24176 . + 0 ID=cds-WP_060148168.1;Parent=gene-LDO49_RS26735;Dbxref=GenBank:WP_060148168.1;Name=WP_060148168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014615792.1;locus_tag=LDO49_RS26735;product=hypothetical protein;protein_id=WP_060148168.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 24294 24482 . - . ID=gene-LDO49_RS26740;Name=LDO49_RS26740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26740;old_locus_tag=BCEP4_510027 NZ_CAJZAV010000259.1 Protein Homology CDS 24294 24482 . - 0 ID=cds-WP_021158119.1;Parent=gene-LDO49_RS26740;Dbxref=GenBank:WP_021158119.1;Name=WP_021158119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750534.1;locus_tag=LDO49_RS26740;product=hypothetical protein;protein_id=WP_021158119.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 25098 27209 . + . ID=gene-LDO49_RS26745;Name=LDO49_RS26745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26745;old_locus_tag=BCEP4_510028 NZ_CAJZAV010000259.1 Protein Homology CDS 25098 27209 . + 0 ID=cds-WP_224052536.1;Parent=gene-LDO49_RS26745;Dbxref=GenBank:WP_224052536.1;Name=WP_224052536.1;Ontology_term=GO:0003824,GO:0051539,GO:1904047;gbkey=CDS;go_function=catalytic activity|0003824||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349796.1;locus_tag=LDO49_RS26745;product=radical SAM protein;protein_id=WP_224052536.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 27314 29644 . - . ID=gene-LDO49_RS26750;Name=LDO49_RS26750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26750;old_locus_tag=BCEP4_510029 NZ_CAJZAV010000259.1 Protein Homology CDS 27314 29644 . - 0 ID=cds-WP_175851230.1;Parent=gene-LDO49_RS26750;Dbxref=GenBank:WP_175851230.1;Name=WP_175851230.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349797.1;locus_tag=LDO49_RS26750;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_175851230.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 29698 31800 . - . ID=gene-LDO49_RS26755;Name=LDO49_RS26755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26755;old_locus_tag=BCEP4_510030 NZ_CAJZAV010000259.1 Protein Homology CDS 29698 31800 . - 0 ID=cds-WP_224052537.1;Parent=gene-LDO49_RS26755;Dbxref=GenBank:WP_224052537.1;Name=WP_224052537.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0071111,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA,cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099939.1;locus_tag=LDO49_RS26755;product=putative bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_224052537.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 32370 34067 . - . ID=gene-LDO49_RS26760;Name=LDO49_RS26760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26760;old_locus_tag=BCEP4_510031 NZ_CAJZAV010000259.1 Protein Homology CDS 32370 34067 . - 0 ID=cds-WP_059555531.1;Parent=gene-LDO49_RS26760;Dbxref=GenBank:WP_059555531.1;Name=WP_059555531.1;Ontology_term=GO:0006508,GO:0004222,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009899575.1;locus_tag=LDO49_RS26760;product=M4 family metallopeptidase;protein_id=WP_059555531.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 34405 34608 . - . ID=gene-LDO49_RS26765;Name=LDO49_RS26765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26765 NZ_CAJZAV010000259.1 GeneMarkS-2+ CDS 34405 34608 . - 0 ID=cds-WP_124844407.1;Parent=gene-LDO49_RS26765;Dbxref=GenBank:WP_124844407.1;Name=WP_124844407.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS26765;product=hypothetical protein;protein_id=WP_124844407.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 34707 35921 . - . ID=gene-LDO49_RS26770;Name=LDO49_RS26770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26770;old_locus_tag=BCEP4_510033 NZ_CAJZAV010000259.1 Protein Homology CDS 34707 35921 . - 0 ID=cds-WP_224052538.1;Parent=gene-LDO49_RS26770;Dbxref=GenBank:WP_224052538.1;Name=WP_224052538.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349852.1;locus_tag=LDO49_RS26770;product=MFS transporter;protein_id=WP_224052538.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 36325 36855 . + . ID=gene-LDO49_RS26775;Name=LDO49_RS26775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26775;old_locus_tag=BCEP4_510035 NZ_CAJZAV010000259.1 Protein Homology CDS 36325 36855 . + 0 ID=cds-WP_224052539.1;Parent=gene-LDO49_RS26775;Dbxref=GenBank:WP_224052539.1;Name=WP_224052539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483337.1;locus_tag=LDO49_RS26775;product=toxin;protein_id=WP_224052539.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 36890 37639 . - . ID=gene-LDO49_RS26780;Name=LDO49_RS26780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26780;old_locus_tag=BCEP4_510036 NZ_CAJZAV010000259.1 Protein Homology CDS 36890 37639 . - 0 ID=cds-WP_175890553.1;Parent=gene-LDO49_RS26780;Dbxref=GenBank:WP_175890553.1;Name=WP_175890553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349854.1;locus_tag=LDO49_RS26780;product=SDR family oxidoreductase;protein_id=WP_175890553.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 37712 37864 . + . ID=gene-LDO49_RS26785;Name=LDO49_RS26785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26785 NZ_CAJZAV010000259.1 GeneMarkS-2+ CDS 37712 37864 . + 0 ID=cds-WP_224052540.1;Parent=gene-LDO49_RS26785;Dbxref=GenBank:WP_224052540.1;Name=WP_224052540.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS26785;product=hypothetical protein;protein_id=WP_224052540.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 37877 38284 . - . ID=gene-LDO49_RS26790;Name=LDO49_RS26790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26790;old_locus_tag=BCEP4_510037 NZ_CAJZAV010000259.1 Protein Homology CDS 37877 38284 . - 0 ID=cds-WP_027792704.1;Parent=gene-LDO49_RS26790;Dbxref=GenBank:WP_027792704.1;Name=WP_027792704.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483322.1;locus_tag=LDO49_RS26790;product=VOC family protein;protein_id=WP_027792704.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 38606 39520 . - . ID=gene-LDO49_RS26795;Name=LDO49_RS26795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26795;old_locus_tag=BCEP4_510039 NZ_CAJZAV010000259.1 GeneMarkS-2+ CDS 38606 39520 . - 0 ID=cds-WP_224052541.1;Parent=gene-LDO49_RS26795;Dbxref=GenBank:WP_224052541.1;Name=WP_224052541.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS26795;product=hypothetical protein;protein_id=WP_224052541.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 40047 44381 . - . ID=gene-LDO49_RS26800;Name=LDO49_RS26800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26800;old_locus_tag=BCEP4_510040 NZ_CAJZAV010000259.1 Protein Homology CDS 40047 44381 . - 0 ID=cds-WP_372585874.1;Parent=gene-LDO49_RS26800;Dbxref=GenBank:WP_372585874.1;Name=WP_372585874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349858.1;locus_tag=LDO49_RS26800;product=YadA-like family protein;protein_id=WP_372585874.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 45526 46332 . + . ID=gene-LDO49_RS26805;Name=LDO49_RS26805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26805;old_locus_tag=BCEP4_510043 NZ_CAJZAV010000259.1 Protein Homology CDS 45526 46332 . + 0 ID=cds-WP_224052556.1;Parent=gene-LDO49_RS26805;Dbxref=GenBank:WP_224052556.1;Name=WP_224052556.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372407.1;locus_tag=LDO49_RS26805;product=response regulator transcription factor;protein_id=WP_224052556.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 46355 48535 . - . ID=gene-LDO49_RS26810;Name=LDO49_RS26810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26810;old_locus_tag=BCEP4_510044 NZ_CAJZAV010000259.1 Protein Homology CDS 46355 48535 . - 0 ID=cds-WP_224052542.1;Parent=gene-LDO49_RS26810;Dbxref=GenBank:WP_224052542.1;Name=WP_224052542.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661238.1;locus_tag=LDO49_RS26810;product=TonB-dependent siderophore receptor;protein_id=WP_224052542.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 48881 49906 . - . ID=gene-LDO49_RS26815;Name=LDO49_RS26815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26815;old_locus_tag=BCEP4_510045 NZ_CAJZAV010000259.1 Protein Homology CDS 48881 49906 . - 0 ID=cds-WP_224052543.1;Parent=gene-LDO49_RS26815;Dbxref=GenBank:WP_224052543.1;Name=WP_224052543.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372355.1;locus_tag=LDO49_RS26815;product=AraC family transcriptional regulator;protein_id=WP_224052543.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 50259 51506 . + . ID=gene-LDO49_RS26820;Name=LDO49_RS26820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26820;old_locus_tag=BCEP4_510046 NZ_CAJZAV010000259.1 Protein Homology CDS 50259 51506 . + 0 ID=cds-WP_224052544.1;Parent=gene-LDO49_RS26820;Dbxref=GenBank:WP_224052544.1;Name=WP_224052544.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486280.1;locus_tag=LDO49_RS26820;product=dienelactone hydrolase family protein;protein_id=WP_224052544.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 51547 52335 . + . ID=gene-LDO49_RS26825;Name=LDO49_RS26825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26825;old_locus_tag=BCEP4_510047 NZ_CAJZAV010000259.1 Protein Homology CDS 51547 52335 . + 0 ID=cds-WP_224052545.1;Parent=gene-LDO49_RS26825;Dbxref=GenBank:WP_224052545.1;Name=WP_224052545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549043.1;locus_tag=LDO49_RS26825;product=SDR family oxidoreductase;protein_id=WP_224052545.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 52400 53638 . + . ID=gene-LDO49_RS26830;Name=LDO49_RS26830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26830;old_locus_tag=BCEP4_510048 NZ_CAJZAV010000259.1 Protein Homology CDS 52400 53638 . + 0 ID=cds-WP_060372600.1;Parent=gene-LDO49_RS26830;Dbxref=GenBank:WP_060372600.1;Name=WP_060372600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486286.1;locus_tag=LDO49_RS26830;product=styrene monooxygenase/indole monooxygenase family protein;protein_id=WP_060372600.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 53644 54171 . + . ID=gene-LDO49_RS26835;Name=LDO49_RS26835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26835;old_locus_tag=BCEP4_510049 NZ_CAJZAV010000259.1 Protein Homology CDS 53644 54171 . + 0 ID=cds-WP_021158142.1;Parent=gene-LDO49_RS26835;Dbxref=GenBank:WP_021158142.1;Name=WP_021158142.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349867.1;locus_tag=LDO49_RS26835;product=flavin reductase family protein;protein_id=WP_021158142.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 54208 55164 . + . ID=gene-LDO49_RS26840;Name=LDO49_RS26840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26840;old_locus_tag=BCEP4_510050 NZ_CAJZAV010000259.1 Protein Homology CDS 54208 55164 . + 0 ID=cds-WP_224052546.1;Parent=gene-LDO49_RS26840;Dbxref=GenBank:WP_224052546.1;Name=WP_224052546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336883.1;locus_tag=LDO49_RS26840;product=SphA family protein;protein_id=WP_224052546.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 55301 56563 . + . ID=gene-LDO49_RS26845;Name=LDO49_RS26845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26845;old_locus_tag=BCEP4_510051 NZ_CAJZAV010000259.1 Protein Homology CDS 55301 56563 . + 0 ID=cds-WP_081079518.1;Parent=gene-LDO49_RS26845;Dbxref=GenBank:WP_081079518.1;Name=WP_081079518.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349869.1;locus_tag=LDO49_RS26845;product=serine hydrolase domain-containing protein;protein_id=WP_081079518.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 56862 57842 . - . ID=gene-LDO49_RS26850;Name=LDO49_RS26850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26850;old_locus_tag=BCEP4_510052 NZ_CAJZAV010000259.1 Protein Homology CDS 56862 57842 . - 0 ID=cds-WP_059485652.1;Parent=gene-LDO49_RS26850;Dbxref=GenBank:WP_059485652.1;Name=WP_059485652.1;Ontology_term=GO:0015628,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486292.1;locus_tag=LDO49_RS26850;product=type II secretion system F family protein;protein_id=WP_059485652.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 57879 58856 . - . ID=gene-LDO49_RS26855;Name=LDO49_RS26855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26855;old_locus_tag=BCEP4_510053 NZ_CAJZAV010000259.1 Protein Homology CDS 57879 58856 . - 0 ID=cds-WP_059485651.1;Parent=gene-LDO49_RS26855;Dbxref=GenBank:WP_059485651.1;Name=WP_059485651.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004537325.1;locus_tag=LDO49_RS26855;product=type II secretion system F family protein;protein_id=WP_059485651.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 58890 60257 . - . ID=gene-LDO49_RS26860;Name=LDO49_RS26860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26860;old_locus_tag=BCEP4_510054 NZ_CAJZAV010000259.1 Protein Homology CDS 58890 60257 . - 0 ID=cds-WP_224052547.1;Parent=gene-LDO49_RS26860;Dbxref=GenBank:WP_224052547.1;Name=WP_224052547.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486287.1;locus_tag=LDO49_RS26860;product=CpaF family protein;protein_id=WP_224052547.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 60276 61484 . - . ID=gene-LDO49_RS26865;Name=LDO49_RS26865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26865;old_locus_tag=BCEP4_510055 NZ_CAJZAV010000259.1 Protein Homology CDS 60276 61484 . - 0 ID=cds-WP_059485647.1;Parent=gene-LDO49_RS26865;Dbxref=GenBank:WP_059485647.1;Name=WP_059485647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908183.1;locus_tag=LDO49_RS26865;product=AAA family ATPase;protein_id=WP_059485647.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 61507 61950 . - . ID=gene-LDO49_RS26870;Name=LDO49_RS26870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26870;old_locus_tag=BCEP4_510056 NZ_CAJZAV010000259.1 Protein Homology CDS 61507 61950 . - 0 ID=cds-WP_060148145.1;Parent=gene-LDO49_RS26870;Dbxref=GenBank:WP_060148145.1;Name=WP_060148145.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549050.1;locus_tag=LDO49_RS26870;product=TadE/TadG family type IV pilus assembly protein;protein_id=WP_060148145.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 61947 62480 . - . ID=gene-LDO49_RS26875;Name=LDO49_RS26875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26875;old_locus_tag=BCEP4_510057 NZ_CAJZAV010000259.1 Protein Homology CDS 61947 62480 . - 0 ID=cds-WP_060148144.1;Parent=gene-LDO49_RS26875;Dbxref=GenBank:WP_060148144.1;Name=WP_060148144.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880526.1;locus_tag=LDO49_RS26875;product=TadE/TadG family type IV pilus assembly protein;protein_id=WP_060148144.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 62494 63765 . - . ID=gene-LDO49_RS26880;Name=LDO49_RS26880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26880;old_locus_tag=BCEP4_510058 NZ_CAJZAV010000259.1 Protein Homology CDS 62494 63765 . - 0 ID=cds-WP_060148142.1;Parent=gene-LDO49_RS26880;Dbxref=GenBank:WP_060148142.1;Name=WP_060148142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372339.1;locus_tag=LDO49_RS26880;product=pilus assembly protein TadG-related protein;protein_id=WP_060148142.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 63792 64088 . - . ID=gene-LDO49_RS26885;Name=LDO49_RS26885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26885;old_locus_tag=BCEP4_510059 NZ_CAJZAV010000259.1 Protein Homology CDS 63792 64088 . - 0 ID=cds-WP_021158151.1;Parent=gene-LDO49_RS26885;Dbxref=GenBank:WP_021158151.1;Name=WP_021158151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661166.1;locus_tag=LDO49_RS26885;product=hypothetical protein;protein_id=WP_021158151.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 64109 66046 . - . ID=gene-LDO49_RS26890;Name=LDO49_RS26890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26890;old_locus_tag=BCEP4_510060 NZ_CAJZAV010000259.1 Protein Homology CDS 64109 66046 . - 0 ID=cds-WP_060148140.1;Parent=gene-LDO49_RS26890;Dbxref=GenBank:WP_060148140.1;Name=WP_060148140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549054.1;locus_tag=LDO49_RS26890;product=type II and III secretion system protein family protein;protein_id=WP_060148140.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 66146 66985 . - . ID=gene-LDO49_RS26895;Name=cpaB;gbkey=Gene;gene=cpaB;gene_biotype=protein_coding;locus_tag=LDO49_RS26895;old_locus_tag=BCEP4_510061 NZ_CAJZAV010000259.1 Protein Homology CDS 66146 66985 . - 0 ID=cds-WP_060148138.1;Parent=gene-LDO49_RS26895;Dbxref=GenBank:WP_060148138.1;Name=WP_060148138.1;gbkey=CDS;gene=cpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603420.1;locus_tag=LDO49_RS26895;product=Flp pilus assembly protein CpaB;protein_id=WP_060148138.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 67021 68421 . - . ID=gene-LDO49_RS26900;Name=LDO49_RS26900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26900;old_locus_tag=BCEP4_510062 NZ_CAJZAV010000259.1 Protein Homology CDS 67021 68421 . - 0 ID=cds-WP_059486110.1;Parent=gene-LDO49_RS26900;Dbxref=GenBank:WP_059486110.1;Name=WP_059486110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498089.1;locus_tag=LDO49_RS26900;product=hypothetical protein;protein_id=WP_059486110.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 68454 68993 . - . ID=gene-LDO49_RS26905;Name=LDO49_RS26905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26905;old_locus_tag=BCEP4_510063 NZ_CAJZAV010000259.1 Protein Homology CDS 68454 68993 . - 0 ID=cds-WP_060148136.1;Parent=gene-LDO49_RS26905;Dbxref=GenBank:WP_060148136.1;Name=WP_060148136.1;Ontology_term=GO:0006508,GO:0004190;gbkey=CDS;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549057.1;locus_tag=LDO49_RS26905;product=A24 family peptidase;protein_id=WP_060148136.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 69021 69227 . - . ID=gene-LDO49_RS26910;Name=LDO49_RS26910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26910;old_locus_tag=BCEP4_510064 NZ_CAJZAV010000259.1 Protein Homology CDS 69021 69227 . - 0 ID=cds-WP_059485633.1;Parent=gene-LDO49_RS26910;Dbxref=GenBank:WP_059485633.1;Name=WP_059485633.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336895.1;locus_tag=LDO49_RS26910;product=Flp family type IVb pilin;protein_id=WP_059485633.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 69310 69501 . - . ID=gene-LDO49_RS26915;Name=LDO49_RS26915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26915;old_locus_tag=BCEP4_510065 NZ_CAJZAV010000259.1 Protein Homology CDS 69310 69501 . - 0 ID=cds-WP_011349893.1;Parent=gene-LDO49_RS26915;Dbxref=GenBank:WP_011349893.1;Name=WP_011349893.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349893.1;locus_tag=LDO49_RS26915;product=Flp family type IVb pilin;protein_id=WP_011349893.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 69642 69833 . - . ID=gene-LDO49_RS26920;Name=LDO49_RS26920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26920;old_locus_tag=BCEP4_510066 NZ_CAJZAV010000259.1 Protein Homology CDS 69642 69833 . - 0 ID=cds-WP_059485629.1;Parent=gene-LDO49_RS26920;Dbxref=GenBank:WP_059485629.1;Name=WP_059485629.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349894.1;locus_tag=LDO49_RS26920;product=Flp family type IVb pilin;protein_id=WP_059485629.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 70517 70804 . - . ID=gene-LDO49_RS26925;Name=LDO49_RS26925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26925 NZ_CAJZAV010000259.1 GeneMarkS-2+ CDS 70517 70804 . - 0 ID=cds-WP_148096859.1;Parent=gene-LDO49_RS26925;Dbxref=GenBank:WP_148096859.1;Name=WP_148096859.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS26925;product=hypothetical protein;protein_id=WP_148096859.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 70886 72124 . + . ID=gene-LDO49_RS26930;Name=LDO49_RS26930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26930;old_locus_tag=BCEP4_510068 NZ_CAJZAV010000259.1 Protein Homology CDS 70886 72124 . + 0 ID=cds-WP_059710580.1;Parent=gene-LDO49_RS26930;Dbxref=GenBank:WP_059710580.1;Name=WP_059710580.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753344.1;locus_tag=LDO49_RS26930;product=glycosyltransferase family 87 protein;protein_id=WP_059710580.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 72121 73500 . + . ID=gene-LDO49_RS26935;Name=LDO49_RS26935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26935;old_locus_tag=BCEP4_510069 NZ_CAJZAV010000259.1 Protein Homology CDS 72121 73500 . + 0 ID=cds-WP_060148134.1;Parent=gene-LDO49_RS26935;Dbxref=GenBank:WP_060148134.1;Name=WP_060148134.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349896.1;locus_tag=LDO49_RS26935;product=glycosyltransferase family 87 protein;protein_id=WP_060148134.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 73525 74568 . + . ID=gene-LDO49_RS26940;Name=LDO49_RS26940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26940;old_locus_tag=BCEP4_510070 NZ_CAJZAV010000259.1 Protein Homology CDS 73525 74568 . + 0 ID=cds-WP_124842511.1;Parent=gene-LDO49_RS26940;Dbxref=GenBank:WP_124842511.1;Name=WP_124842511.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548396.1;locus_tag=LDO49_RS26940;product=glycosyltransferase family 2 protein;protein_id=WP_124842511.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 74584 74967 . + . ID=gene-LDO49_RS26945;Name=LDO49_RS26945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26945;old_locus_tag=BCEP4_510071 NZ_CAJZAV010000259.1 Protein Homology CDS 74584 74967 . + 0 ID=cds-WP_059555505.1;Parent=gene-LDO49_RS26945;Dbxref=GenBank:WP_059555505.1;Name=WP_059555505.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549065.1;locus_tag=LDO49_RS26945;product=GtrA family protein;protein_id=WP_059555505.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 75264 75767 . + . ID=gene-LDO49_RS26950;Name=LDO49_RS26950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26950;old_locus_tag=BCEP4_510072 NZ_CAJZAV010000259.1 Protein Homology CDS 75264 75767 . + 0 ID=cds-WP_027792733.1;Parent=gene-LDO49_RS26950;Dbxref=GenBank:WP_027792733.1;Name=WP_027792733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349899.1;locus_tag=LDO49_RS26950;product=inclusion body family protein;protein_id=WP_027792733.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 75833 76723 . + . ID=gene-LDO49_RS26955;Name=LDO49_RS26955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26955;old_locus_tag=BCEP4_510073 NZ_CAJZAV010000259.1 Protein Homology CDS 75833 76723 . + 0 ID=cds-WP_081079517.1;Parent=gene-LDO49_RS26955;Dbxref=GenBank:WP_081079517.1;Name=WP_081079517.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023725.6;locus_tag=LDO49_RS26955;product=AidA/PixA family protein;protein_id=WP_081079517.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 76752 77690 . - . ID=gene-LDO49_RS26960;Name=LDO49_RS26960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26960;old_locus_tag=BCEP4_510074 NZ_CAJZAV010000259.1 Protein Homology CDS 76752 77690 . - 0 ID=cds-WP_060148130.1;Parent=gene-LDO49_RS26960;Dbxref=GenBank:WP_060148130.1;Name=WP_060148130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549067.1;locus_tag=LDO49_RS26960;product=ABC transporter substrate-binding protein;protein_id=WP_060148130.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 77809 78927 . - . ID=gene-LDO49_RS26965;Name=LDO49_RS26965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26965;old_locus_tag=BCEP4_510075 NZ_CAJZAV010000259.1 Protein Homology CDS 77809 78927 . - 0 ID=cds-WP_059699394.1;Parent=gene-LDO49_RS26965;Dbxref=GenBank:WP_059699394.1;Name=WP_059699394.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336902.1;locus_tag=LDO49_RS26965;product=TauD/TfdA family dioxygenase;protein_id=WP_059699394.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 79364 80797 . + . ID=gene-LDO49_RS26970;Name=LDO49_RS26970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26970;old_locus_tag=BCEP4_510077 NZ_CAJZAV010000259.1 Protein Homology CDS 79364 80797 . + 0 ID=cds-WP_060148129.1;Parent=gene-LDO49_RS26970;Dbxref=GenBank:WP_060148129.1;Name=WP_060148129.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549069.1;locus_tag=LDO49_RS26970;product=MFS transporter;protein_id=WP_060148129.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 80849 82117 . + . ID=gene-LDO49_RS26975;Name=LDO49_RS26975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26975;old_locus_tag=BCEP4_510078 NZ_CAJZAV010000259.1 Protein Homology CDS 80849 82117 . + 0 ID=cds-WP_060148127.1;Parent=gene-LDO49_RS26975;Dbxref=GenBank:WP_060148127.1;Name=WP_060148127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491160.1;locus_tag=LDO49_RS26975;product=ATP-grasp domain-containing protein;protein_id=WP_060148127.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 82204 83079 . - . ID=gene-LDO49_RS26980;Name=LDO49_RS26980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26980;old_locus_tag=BCEP4_510079 NZ_CAJZAV010000259.1 Protein Homology CDS 82204 83079 . - 0 ID=cds-WP_059675392.1;Parent=gene-LDO49_RS26980;Dbxref=GenBank:WP_059675392.1;Name=WP_059675392.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498077.1;locus_tag=LDO49_RS26980;product=LysR family transcriptional regulator;protein_id=WP_059675392.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 83247 84191 . + . ID=gene-LDO49_RS26985;Name=LDO49_RS26985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26985;old_locus_tag=BCEP4_510080 NZ_CAJZAV010000259.1 Protein Homology CDS 83247 84191 . + 0 ID=cds-WP_224052548.1;Parent=gene-LDO49_RS26985;Dbxref=GenBank:WP_224052548.1;Name=WP_224052548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336906.1;locus_tag=LDO49_RS26985;product=hypothetical protein;protein_id=WP_224052548.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 84235 85464 . + . ID=gene-LDO49_RS26990;Name=LDO49_RS26990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26990;old_locus_tag=BCEP4_510081 NZ_CAJZAV010000259.1 Protein Homology CDS 84235 85464 . + 0 ID=cds-WP_081079516.1;Parent=gene-LDO49_RS26990;Dbxref=GenBank:WP_081079516.1;Name=WP_081079516.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751971.1;locus_tag=LDO49_RS26990;product=ATP-grasp domain-containing protein;protein_id=WP_081079516.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 85735 86259 . - . ID=gene-LDO49_RS26995;Name=LDO49_RS26995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS26995;old_locus_tag=BCEP4_510082 NZ_CAJZAV010000259.1 Protein Homology CDS 85735 86259 . - 0 ID=cds-WP_059492981.1;Parent=gene-LDO49_RS26995;Dbxref=GenBank:WP_059492981.1;Name=WP_059492981.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349904.1;locus_tag=LDO49_RS26995;product=GNAT family N-acetyltransferase;protein_id=WP_059492981.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 86773 87975 . + . ID=gene-LDO49_RS27000;Name=LDO49_RS27000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27000;old_locus_tag=BCEP4_510083 NZ_CAJZAV010000259.1 Protein Homology CDS 86773 87975 . + 0 ID=cds-WP_059555502.1;Parent=gene-LDO49_RS27000;Dbxref=GenBank:WP_059555502.1;Name=WP_059555502.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349906.1;locus_tag=LDO49_RS27000;product=ATP-binding protein;protein_id=WP_059555502.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 87980 89683 . + . ID=gene-LDO49_RS27005;Name=LDO49_RS27005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27005;old_locus_tag=BCEP4_510084 NZ_CAJZAV010000259.1 Protein Homology CDS 87980 89683 . + 0 ID=cds-WP_224052549.1;Parent=gene-LDO49_RS27005;Dbxref=GenBank:WP_224052549.1;Name=WP_224052549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349907.1;locus_tag=LDO49_RS27005;product=cobaltochelatase CobT-related protein;protein_id=WP_224052549.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 89646 91460 . - . ID=gene-LDO49_RS27010;Name=LDO49_RS27010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27010;old_locus_tag=BCEP4_510085 NZ_CAJZAV010000259.1 Protein Homology CDS 89646 91460 . - 0 ID=cds-WP_060148123.1;Parent=gene-LDO49_RS27010;Dbxref=GenBank:WP_060148123.1;Name=WP_060148123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600315.1;locus_tag=LDO49_RS27010;product=histidine kinase;protein_id=WP_060148123.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 91539 92957 . - . ID=gene-LDO49_RS27015;Name=LDO49_RS27015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27015;old_locus_tag=BCEP4_510086 NZ_CAJZAV010000259.1 Protein Homology CDS 91539 92957 . - 0 ID=cds-WP_021156619.1;Parent=gene-LDO49_RS27015;Dbxref=GenBank:WP_021156619.1;Name=WP_021156619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485550.1;locus_tag=LDO49_RS27015;product=HD domain-containing phosphohydrolase;protein_id=WP_021156619.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 93095 93544 . - . ID=gene-LDO49_RS27020;Name=LDO49_RS27020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27020;old_locus_tag=BCEP4_510087 NZ_CAJZAV010000259.1 Protein Homology CDS 93095 93544 . - 0 ID=cds-WP_224052550.1;Parent=gene-LDO49_RS27020;Dbxref=GenBank:WP_224052550.1;Name=WP_224052550.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336956.1;locus_tag=LDO49_RS27020;product=GNAT family N-acetyltransferase;protein_id=WP_224052550.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 93659 94198 . - . ID=gene-LDO49_RS27025;Name=LDO49_RS27025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27025;old_locus_tag=BCEP4_510088 NZ_CAJZAV010000259.1 Protein Homology CDS 93659 94198 . - 0 ID=cds-WP_224052551.1;Parent=gene-LDO49_RS27025;Dbxref=GenBank:WP_224052551.1;Name=WP_224052551.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349912.1;locus_tag=LDO49_RS27025;product=tetratricopeptide repeat protein;protein_id=WP_224052551.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 94396 95715 . + . ID=gene-LDO49_RS27030;Name=LDO49_RS27030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27030;old_locus_tag=BCEP4_510089 NZ_CAJZAV010000259.1 GeneMarkS-2+ CDS 94396 95715 . + 0 ID=cds-WP_224052552.1;Parent=gene-LDO49_RS27030;Dbxref=GenBank:WP_224052552.1;Name=WP_224052552.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27030;product=DUF6136 family protein;protein_id=WP_224052552.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 95727 96350 . + . ID=gene-LDO49_RS27035;Name=LDO49_RS27035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27035;old_locus_tag=BCEP4_510090 NZ_CAJZAV010000259.1 Protein Homology CDS 95727 96350 . + 0 ID=cds-WP_175851257.1;Parent=gene-LDO49_RS27035;Dbxref=GenBank:WP_175851257.1;Name=WP_175851257.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349913.1;locus_tag=LDO49_RS27035;product=ABC transporter ATP-binding protein;protein_id=WP_175851257.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 96508 96714 . - . ID=gene-LDO49_RS27040;Name=LDO49_RS27040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27040 NZ_CAJZAV010000259.1 GeneMarkS-2+ CDS 96508 96714 . - 0 ID=cds-WP_111997085.1;Parent=gene-LDO49_RS27040;Dbxref=GenBank:WP_111997085.1;Name=WP_111997085.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27040;product=hypothetical protein;protein_id=WP_111997085.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 96808 98220 . - . ID=gene-LDO49_RS27045;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=LDO49_RS27045;old_locus_tag=BCEP4_510091 NZ_CAJZAV010000259.1 Protein Homology CDS 96808 98220 . - 0 ID=cds-WP_027792749.1;Parent=gene-LDO49_RS27045;Dbxref=GenBank:WP_027792749.1;Name=WP_027792749.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725601.1;locus_tag=LDO49_RS27045;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_027792749.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 98234 99826 . - . ID=gene-LDO49_RS27050;Name=LDO49_RS27050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27050;old_locus_tag=BCEP4_510092 NZ_CAJZAV010000259.1 Protein Homology CDS 98234 99826 . - 0 ID=cds-WP_059555492.1;Parent=gene-LDO49_RS27050;Dbxref=GenBank:WP_059555492.1;Name=WP_059555492.1;Ontology_term=GO:1902600;gbkey=CDS;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012371936.1;locus_tag=LDO49_RS27050;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_059555492.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 100416 101000 . - . ID=gene-LDO49_RS27055;Name=LDO49_RS27055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27055;old_locus_tag=BCEP4_510094 NZ_CAJZAV010000259.1 Protein Homology CDS 100416 101000 . - 0 ID=cds-WP_224052553.1;Parent=gene-LDO49_RS27055;Dbxref=GenBank:WP_224052553.1;Name=WP_224052553.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019544.6;locus_tag=LDO49_RS27055;product=chloramphenicol phosphotransferase CPT family protein;protein_id=WP_224052553.1;transl_table=11 NZ_CAJZAV010000259.1 RefSeq gene 100978 102450 . - . ID=gene-LDO49_RS27060;Name=LDO49_RS27060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27060;old_locus_tag=BCEP4_510095 NZ_CAJZAV010000259.1 Protein Homology CDS 100978 102450 . - 0 ID=cds-WP_224052554.1;Parent=gene-LDO49_RS27060;Dbxref=GenBank:WP_224052554.1;Name=WP_224052554.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004552222.1;locus_tag=LDO49_RS27060;product=MFS transporter;protein_id=WP_224052554.1;transl_table=11 ##sequence-region NZ_CAJZAV010000260.1 1 33069 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000260.1 RefSeq region 1 33069 . + . ID=NZ_CAJZAV010000260.1:1..33069;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_52 NZ_CAJZAV010000260.1 RefSeq gene 56 1096 . - . ID=gene-LDO49_RS27065;Name=LDO49_RS27065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27065;old_locus_tag=BCEP4_520001 NZ_CAJZAV010000260.1 Protein Homology CDS 56 1096 . - 0 ID=cds-WP_224052557.1;Parent=gene-LDO49_RS27065;Dbxref=GenBank:WP_224052557.1;Name=WP_224052557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415445.1;locus_tag=LDO49_RS27065;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_224052557.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 1138 2130 . - . ID=gene-LDO49_RS27070;Name=LDO49_RS27070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27070;old_locus_tag=BCEP4_520002 NZ_CAJZAV010000260.1 Protein Homology CDS 1138 2130 . - 0 ID=cds-WP_224052558.1;Parent=gene-LDO49_RS27070;Dbxref=GenBank:WP_224052558.1;Name=WP_224052558.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019044261.1;locus_tag=LDO49_RS27070;product=bifunctional enoyl-CoA hydratase/phosphate acetyltransferase;protein_id=WP_224052558.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 2127 3947 . - . ID=gene-LDO49_RS27075;Name=LDO49_RS27075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27075;old_locus_tag=BCEP4_520003 NZ_CAJZAV010000260.1 Protein Homology CDS 2127 3947 . - 0 ID=cds-WP_224052559.1;Parent=gene-LDO49_RS27075;Dbxref=GenBank:WP_224052559.1;Name=WP_224052559.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366073.1;locus_tag=LDO49_RS27075;product=PHA/PHB synthase family protein;protein_id=WP_224052559.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 3944 4690 . - . ID=gene-LDO49_RS27080;Name=LDO49_RS27080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27080;old_locus_tag=BCEP4_520004 NZ_CAJZAV010000260.1 Protein Homology CDS 3944 4690 . - 0 ID=cds-WP_060089365.1;Parent=gene-LDO49_RS27080;Dbxref=GenBank:WP_060089365.1;Name=WP_060089365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752853.1;locus_tag=LDO49_RS27080;product=beta-ketoacyl-ACP reductase;protein_id=WP_060089365.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 4680 5219 . - . ID=gene-LDO49_RS27085;Name=LDO49_RS27085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27085;old_locus_tag=BCEP4_520005 NZ_CAJZAV010000260.1 Protein Homology CDS 4680 5219 . - 0 ID=cds-WP_021159383.1;Parent=gene-LDO49_RS27085;Dbxref=GenBank:WP_021159383.1;Name=WP_021159383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488373.1;locus_tag=LDO49_RS27085;product=hypothetical protein;protein_id=WP_021159383.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 5409 6248 . + . ID=gene-LDO49_RS27090;Name=LDO49_RS27090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27090;old_locus_tag=BCEP4_520007 NZ_CAJZAV010000260.1 Protein Homology CDS 5409 6248 . + 0 ID=cds-WP_059484435.1;Parent=gene-LDO49_RS27090;Dbxref=GenBank:WP_059484435.1;Name=WP_059484435.1;Ontology_term=GO:0050896,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=response to stimulus|0050896||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009968117.1;locus_tag=LDO49_RS27090;product=universal stress protein;protein_id=WP_059484435.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 6257 7456 . + . ID=gene-LDO49_RS27095;Name=LDO49_RS27095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27095;old_locus_tag=BCEP4_520006 NZ_CAJZAV010000260.1 Protein Homology CDS 6257 7456 . + 0 ID=cds-WP_224052560.1;Parent=gene-LDO49_RS27095;Dbxref=GenBank:WP_224052560.1;Name=WP_224052560.1;Ontology_term=GO:0006082,GO:0016310,GO:0000287,GO:0005524,GO:0016301,GO:0016774;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C carboxyl group as acceptor|0016774||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488472.1;locus_tag=LDO49_RS27095;product=acetate/propionate family kinase;protein_id=WP_224052560.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 7526 8029 . + . ID=gene-LDO49_RS27100;Name=LDO49_RS27100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27100;old_locus_tag=BCEP4_520008 NZ_CAJZAV010000260.1 Protein Homology CDS 7526 8029 . + 0 ID=cds-WP_021159380.1;Parent=gene-LDO49_RS27100;Dbxref=GenBank:WP_021159380.1;Name=WP_021159380.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218247.1;locus_tag=LDO49_RS27100;product=universal stress protein;protein_id=WP_021159380.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 8026 8859 . + . ID=gene-LDO49_RS27105;Name=LDO49_RS27105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27105;old_locus_tag=BCEP4_520009 NZ_CAJZAV010000260.1 Protein Homology CDS 8026 8859 . + 0 ID=cds-WP_021159379.1;Parent=gene-LDO49_RS27105;Dbxref=GenBank:WP_021159379.1;Name=WP_021159379.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880393.1;locus_tag=LDO49_RS27105;product=universal stress protein;protein_id=WP_021159379.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 8903 9373 . - . ID=gene-LDO49_RS27110;Name=LDO49_RS27110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27110;old_locus_tag=BCEP4_520010 NZ_CAJZAV010000260.1 Protein Homology CDS 8903 9373 . - 0 ID=cds-WP_021159378.1;Parent=gene-LDO49_RS27110;Dbxref=GenBank:WP_021159378.1;Name=WP_021159378.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726027.1;locus_tag=LDO49_RS27110;product=universal stress protein;protein_id=WP_021159378.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 9622 11616 . + . ID=gene-LDO49_RS27115;Name=LDO49_RS27115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27115;old_locus_tag=BCEP4_520012 NZ_CAJZAV010000260.1 Protein Homology CDS 9622 11616 . + 0 ID=cds-WP_224052561.1;Parent=gene-LDO49_RS27115;Dbxref=GenBank:WP_224052561.1;Name=WP_224052561.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415441.1;locus_tag=LDO49_RS27115;product=PAS domain S-box protein;protein_id=WP_224052561.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 11613 12260 . + . ID=gene-LDO49_RS27120;Name=LDO49_RS27120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27120;old_locus_tag=BCEP4_520013 NZ_CAJZAV010000260.1 Protein Homology CDS 11613 12260 . + 0 ID=cds-WP_021159376.1;Parent=gene-LDO49_RS27120;Dbxref=GenBank:WP_021159376.1;Name=WP_021159376.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329510.1;locus_tag=LDO49_RS27120;product=response regulator;protein_id=WP_021159376.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 12363 12632 . - . ID=gene-LDO49_RS27125;Name=LDO49_RS27125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27125 NZ_CAJZAV010000260.1 GeneMarkS-2+ CDS 12363 12632 . - 0 ID=cds-WP_175925370.1;Parent=gene-LDO49_RS27125;Dbxref=GenBank:WP_175925370.1;Name=WP_175925370.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27125;product=hypothetical protein;protein_id=WP_175925370.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 12631 13431 . + . ID=gene-LDO49_RS27130;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=LDO49_RS27130;old_locus_tag=BCEP4_520014 NZ_CAJZAV010000260.1 Protein Homology CDS 12631 13431 . + 0 ID=cds-WP_224052562.1;Parent=gene-LDO49_RS27130;Dbxref=GenBank:WP_224052562.1;Name=WP_224052562.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=fnr;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488370.1;locus_tag=LDO49_RS27130;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_224052562.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 13463 14452 . - . ID=gene-LDO49_RS27135;Name=LDO49_RS27135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27135;old_locus_tag=BCEP4_520015 NZ_CAJZAV010000260.1 Protein Homology CDS 13463 14452 . - 0 ID=cds-WP_224052563.1;Parent=gene-LDO49_RS27135;Dbxref=GenBank:WP_224052563.1;Name=WP_224052563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752861.1;locus_tag=LDO49_RS27135;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_224052563.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 14627 15628 . + . ID=gene-LDO49_RS27140;Name=LDO49_RS27140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27140;old_locus_tag=BCEP4_520016 NZ_CAJZAV010000260.1 Protein Homology CDS 14627 15628 . + 0 ID=cds-WP_224052564.1;Parent=gene-LDO49_RS27140;Dbxref=GenBank:WP_224052564.1;Name=WP_224052564.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726032.1;locus_tag=LDO49_RS27140;product=Acg family FMN-binding oxidoreductase;protein_id=WP_224052564.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 15679 16014 . + . ID=gene-LDO49_RS27145;Name=LDO49_RS27145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27145;old_locus_tag=BCEP4_520017 NZ_CAJZAV010000260.1 Protein Homology CDS 15679 16014 . + 0 ID=cds-WP_021159373.1;Parent=gene-LDO49_RS27145;Dbxref=GenBank:WP_021159373.1;Name=WP_021159373.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726033.1;locus_tag=LDO49_RS27145;product=c-type cytochrome;protein_id=WP_021159373.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 16037 17068 . + . ID=gene-LDO49_RS27150;Name=LDO49_RS27150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27150;old_locus_tag=BCEP4_520018 NZ_CAJZAV010000260.1 Protein Homology CDS 16037 17068 . + 0 ID=cds-WP_165580457.1;Parent=gene-LDO49_RS27150;Dbxref=GenBank:WP_165580457.1;Name=WP_165580457.1;Ontology_term=GO:0009691,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218255.1;locus_tag=LDO49_RS27150;product=TIGR00730 family Rossman fold protein;protein_id=WP_165580457.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 17208 17432 . + . ID=gene-LDO49_RS27155;Name=LDO49_RS27155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27155;old_locus_tag=BCEP4_520019 NZ_CAJZAV010000260.1 Protein Homology CDS 17208 17432 . + 0 ID=cds-WP_059484428.1;Parent=gene-LDO49_RS27155;Dbxref=GenBank:WP_059484428.1;Name=WP_059484428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415436.1;locus_tag=LDO49_RS27155;product=hypothetical protein;protein_id=WP_059484428.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 17611 19377 . + . ID=gene-LDO49_RS27160;Name=LDO49_RS27160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27160;old_locus_tag=BCEP4_520020 NZ_CAJZAV010000260.1 Protein Homology CDS 17611 19377 . + 0 ID=cds-WP_224052565.1;Parent=gene-LDO49_RS27160;Dbxref=GenBank:WP_224052565.1;Name=WP_224052565.1;Ontology_term=GO:0015103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic anion transmembrane transporter activity|0015103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767390.1;locus_tag=LDO49_RS27160;product=SulP family inorganic anion transporter;protein_id=WP_224052565.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 19470 19709 . - . ID=gene-LDO49_RS27165;Name=LDO49_RS27165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27165;old_locus_tag=BCEP4_520021 NZ_CAJZAV010000260.1 Protein Homology CDS 19470 19709 . - 0 ID=cds-WP_021159369.1;Parent=gene-LDO49_RS27165;Dbxref=GenBank:WP_021159369.1;Name=WP_021159369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009690622.1;locus_tag=LDO49_RS27165;product=hypothetical protein;protein_id=WP_021159369.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 19765 20415 . - . ID=gene-LDO49_RS27170;Name=LDO49_RS27170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27170;old_locus_tag=BCEP4_520022 NZ_CAJZAV010000260.1 Protein Homology CDS 19765 20415 . - 0 ID=cds-WP_224052566.1;Parent=gene-LDO49_RS27170;Dbxref=GenBank:WP_224052566.1;Name=WP_224052566.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603916.1;locus_tag=LDO49_RS27170;product=BON domain-containing protein;protein_id=WP_224052566.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 20647 21312 . + . ID=gene-LDO49_RS27175;Name=LDO49_RS27175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27175;old_locus_tag=BCEP4_520023 NZ_CAJZAV010000260.1 Protein Homology CDS 20647 21312 . + 0 ID=cds-WP_059484427.1;Parent=gene-LDO49_RS27175;Dbxref=GenBank:WP_059484427.1;Name=WP_059484427.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372511.1;locus_tag=LDO49_RS27175;product=nitroreductase family protein;protein_id=WP_059484427.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 21417 21851 . - . ID=gene-LDO49_RS27180;Name=LDO49_RS27180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27180;old_locus_tag=BCEP4_520024 NZ_CAJZAV010000260.1 Protein Homology CDS 21417 21851 . - 0 ID=cds-WP_059495681.1;Parent=gene-LDO49_RS27180;Dbxref=GenBank:WP_059495681.1;Name=WP_059495681.1;Ontology_term=GO:0009408,GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529498.1;locus_tag=LDO49_RS27180;product=Hsp20/alpha crystallin family protein;protein_id=WP_059495681.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 22032 22307 . - . ID=gene-LDO49_RS27185;Name=LDO49_RS27185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27185;old_locus_tag=BCEP4_520025 NZ_CAJZAV010000260.1 Protein Homology CDS 22032 22307 . - 0 ID=cds-WP_059484426.1;Parent=gene-LDO49_RS27185;Dbxref=GenBank:WP_059484426.1;Name=WP_059484426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415464.1;locus_tag=LDO49_RS27185;product=DUF1488 domain-containing protein;protein_id=WP_059484426.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 22404 22877 . - . ID=gene-LDO49_RS27190;Name=LDO49_RS27190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27190;old_locus_tag=BCEP4_520026 NZ_CAJZAV010000260.1 Protein Homology CDS 22404 22877 . - 0 ID=cds-WP_021159365.1;Parent=gene-LDO49_RS27190;Dbxref=GenBank:WP_021159365.1;Name=WP_021159365.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218262.1;locus_tag=LDO49_RS27190;product=universal stress protein;protein_id=WP_021159365.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 23012 23485 . - . ID=gene-LDO49_RS27195;Name=LDO49_RS27195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27195;old_locus_tag=BCEP4_520027 NZ_CAJZAV010000260.1 Protein Homology CDS 23012 23485 . - 0 ID=cds-WP_059555019.1;Parent=gene-LDO49_RS27195;Dbxref=GenBank:WP_059555019.1;Name=WP_059555019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372507.1;locus_tag=LDO49_RS27195;product=hypothetical protein;protein_id=WP_059555019.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 23967 25571 . + . ID=gene-LDO49_RS27200;Name=LDO49_RS27200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27200;old_locus_tag=BCEP4_520029 NZ_CAJZAV010000260.1 Protein Homology CDS 23967 25571 . + 0 ID=cds-WP_224052567.1;Parent=gene-LDO49_RS27200;Dbxref=GenBank:WP_224052567.1;Name=WP_224052567.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894377.1;locus_tag=LDO49_RS27200;product=bifunctional aminoglycoside phosphotransferase/ATP-binding protein;protein_id=WP_224052567.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 25638 26897 . - . ID=gene-LDO49_RS27205;Name=LDO49_RS27205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27205;old_locus_tag=BCEP4_520030 NZ_CAJZAV010000260.1 Protein Homology CDS 25638 26897 . - 0 ID=cds-WP_060148391.1;Parent=gene-LDO49_RS27205;Dbxref=GenBank:WP_060148391.1;Name=WP_060148391.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004537895.1;locus_tag=LDO49_RS27205;product=ABC transporter ATP-binding protein;protein_id=WP_060148391.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 27017 28750 . - . ID=gene-LDO49_RS27210;Name=LDO49_RS27210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27210;old_locus_tag=BCEP4_520031 NZ_CAJZAV010000260.1 Protein Homology CDS 27017 28750 . - 0 ID=cds-WP_060148301.1;Parent=gene-LDO49_RS27210;Dbxref=GenBank:WP_060148301.1;Name=WP_060148301.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012464863.1;locus_tag=LDO49_RS27210;product=ABC transporter permease;protein_id=WP_060148301.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 29045 29494 . - . ID=gene-LDO49_RS27215;Name=LDO49_RS27215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27215;old_locus_tag=BCEP4_520032 NZ_CAJZAV010000260.1 Protein Homology CDS 29045 29494 . - 0 ID=cds-WP_042974966.1;Parent=gene-LDO49_RS27215;Dbxref=GenBank:WP_042974966.1;Name=WP_042974966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028287.1;locus_tag=LDO49_RS27215;product=CBS domain-containing protein;protein_id=WP_042974966.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 29626 30276 . - . ID=gene-LDO49_RS27220;Name=LDO49_RS27220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27220;old_locus_tag=BCEP4_520033 NZ_CAJZAV010000260.1 GeneMarkS-2+ CDS 29626 30276 . - 0 ID=cds-WP_224052568.1;Parent=gene-LDO49_RS27220;Dbxref=GenBank:WP_224052568.1;Name=WP_224052568.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27220;product=hypothetical protein;protein_id=WP_224052568.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 30495 30710 . + . ID=gene-LDO49_RS27225;Name=LDO49_RS27225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27225 NZ_CAJZAV010000260.1 Protein Homology CDS 30495 30710 . + 0 ID=cds-WP_048027797.1;Parent=gene-LDO49_RS27225;Dbxref=GenBank:WP_048027797.1;Name=WP_048027797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012464858.1;locus_tag=LDO49_RS27225;product=hypothetical protein;protein_id=WP_048027797.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 31035 31916 . - . ID=gene-LDO49_RS27230;Name=LDO49_RS27230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27230;old_locus_tag=BCEP4_520034 NZ_CAJZAV010000260.1 Protein Homology CDS 31035 31916 . - 0 ID=cds-WP_059554926.1;Parent=gene-LDO49_RS27230;Dbxref=GenBank:WP_059554926.1;Name=WP_059554926.1;Ontology_term=GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: protein motif:HMM:NF015500.6;locus_tag=LDO49_RS27230;product=endo alpha-1%2C4 polygalactosaminidase;protein_id=WP_059554926.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq gene 32188 32664 . + . ID=gene-LDO49_RS27235;Name=LDO49_RS27235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27235;old_locus_tag=BCEP4_520035 NZ_CAJZAV010000260.1 Protein Homology CDS 32188 32664 . + 0 ID=cds-WP_224052569.1;Parent=gene-LDO49_RS27235;Dbxref=GenBank:WP_224052569.1;Name=WP_224052569.1;Ontology_term=GO:0008652,GO:0009073,GO:0000287,GO:0004765,GO:0005524;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,shikimate kinase activity|0004765||IEA,ATP binding|0005524||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015878008.1;locus_tag=LDO49_RS27235;product=shikimate kinase;protein_id=WP_224052569.1;transl_table=11 NZ_CAJZAV010000260.1 RefSeq pseudogene 32828 33069 . + . ID=gene-LDO49_RS27240;Name=LDO49_RS27240;end_range=33069,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS27240;partial=true;pseudo=true NZ_CAJZAV010000260.1 GeneMarkS-2+ CDS 32828 33069 . + 0 ID=cds-LDO49_RS27240;Parent=gene-LDO49_RS27240;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=33069,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27240;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000261.1 1 48119 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000261.1 RefSeq region 1 48119 . + . ID=NZ_CAJZAV010000261.1:1..48119;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_53 NZ_CAJZAV010000261.1 RefSeq gene 138 2822 . - . ID=gene-LDO49_RS27245;Name=LDO49_RS27245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27245;old_locus_tag=BCEP4_530002 NZ_CAJZAV010000261.1 Protein Homology CDS 138 2822 . - 0 ID=cds-WP_060147464.1;Parent=gene-LDO49_RS27245;Dbxref=GenBank:WP_060147464.1;Name=WP_060147464.1;Ontology_term=GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350227.1;locus_tag=LDO49_RS27245;product=GH92 family glycosyl hydrolase;protein_id=WP_060147464.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 3269 4456 . - . ID=gene-LDO49_RS27250;Name=LDO49_RS27250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27250;old_locus_tag=BCEP4_530003 NZ_CAJZAV010000261.1 Protein Homology CDS 3269 4456 . - 0 ID=cds-WP_060147463.1;Parent=gene-LDO49_RS27250;Dbxref=GenBank:WP_060147463.1;Name=WP_060147463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350230.1;locus_tag=LDO49_RS27250;product=YncE family protein;protein_id=WP_060147463.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 4583 6085 . - . ID=gene-LDO49_RS27255;Name=LDO49_RS27255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27255;old_locus_tag=BCEP4_530004 NZ_CAJZAV010000261.1 Protein Homology CDS 4583 6085 . - 0 ID=cds-WP_124475487.1;Parent=gene-LDO49_RS27255;Dbxref=GenBank:WP_124475487.1;Name=WP_124475487.1;Ontology_term=GO:0006508,GO:0008237,GO:0008270;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485205.1;locus_tag=LDO49_RS27255;product=M81 family metallopeptidase;protein_id=WP_124475487.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 6284 7708 . - . ID=gene-LDO49_RS27260;Name=LDO49_RS27260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27260;old_locus_tag=BCEP4_530005 NZ_CAJZAV010000261.1 Protein Homology CDS 6284 7708 . - 0 ID=cds-WP_060147462.1;Parent=gene-LDO49_RS27260;Dbxref=GenBank:WP_060147462.1;Name=WP_060147462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880640.1;locus_tag=LDO49_RS27260;product=aldehyde dehydrogenase family protein;protein_id=WP_060147462.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 7745 9142 . - . ID=gene-LDO49_RS27265;Name=LDO49_RS27265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27265;old_locus_tag=BCEP4_530006 NZ_CAJZAV010000261.1 Protein Homology CDS 7745 9142 . - 0 ID=cds-WP_060147461.1;Parent=gene-LDO49_RS27265;Dbxref=GenBank:WP_060147461.1;Name=WP_060147461.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549276.1;locus_tag=LDO49_RS27265;product=aspartate aminotransferase family protein;protein_id=WP_060147461.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 9193 10584 . - . ID=gene-LDO49_RS27270;Name=LDO49_RS27270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27270;old_locus_tag=BCEP4_530007 NZ_CAJZAV010000261.1 Protein Homology CDS 9193 10584 . - 0 ID=cds-WP_048029121.1;Parent=gene-LDO49_RS27270;Dbxref=GenBank:WP_048029121.1;Name=WP_048029121.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549277.1;locus_tag=LDO49_RS27270;product=APC family permease;protein_id=WP_048029121.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 10836 11930 . + . ID=gene-LDO49_RS27275;Name=LDO49_RS27275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27275;old_locus_tag=BCEP4_530008 NZ_CAJZAV010000261.1 Protein Homology CDS 10836 11930 . + 0 ID=cds-WP_060147460.1;Parent=gene-LDO49_RS27275;Dbxref=GenBank:WP_060147460.1;Name=WP_060147460.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484842.1;locus_tag=LDO49_RS27275;product=AraC family transcriptional regulator;protein_id=WP_060147460.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 12260 14695 . + . ID=gene-LDO49_RS27280;Name=LDO49_RS27280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27280;old_locus_tag=BCEP4_530009 NZ_CAJZAV010000261.1 Protein Homology CDS 12260 14695 . + 0 ID=cds-WP_224052570.1;Parent=gene-LDO49_RS27280;Dbxref=GenBank:WP_224052570.1;Name=WP_224052570.1;Ontology_term=GO:0016310,GO:0016772;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350246.1;locus_tag=LDO49_RS27280;product=PEP-utilizing enzyme;protein_id=WP_224052570.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 14730 15104 . - . ID=gene-LDO49_RS27285;Name=LDO49_RS27285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27285;old_locus_tag=BCEP4_530010 NZ_CAJZAV010000261.1 Protein Homology CDS 14730 15104 . - 0 ID=cds-WP_060147458.1;Parent=gene-LDO49_RS27285;Dbxref=GenBank:WP_060147458.1;Name=WP_060147458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337085.1;locus_tag=LDO49_RS27285;product=hypothetical protein;protein_id=WP_060147458.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 15381 16361 . + . ID=gene-LDO49_RS27290;Name=LDO49_RS27290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27290;old_locus_tag=BCEP4_530011 NZ_CAJZAV010000261.1 Protein Homology CDS 15381 16361 . + 0 ID=cds-WP_060147457.1;Parent=gene-LDO49_RS27290;Dbxref=GenBank:WP_060147457.1;Name=WP_060147457.1;Ontology_term=GO:0003677,GO:0003700,GO:0008080;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337086.1;locus_tag=LDO49_RS27290;product=bifunctional helix-turn-helix transcriptional regulator/GNAT family N-acetyltransferase;protein_id=WP_060147457.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 16773 16997 . + . ID=gene-LDO49_RS27295;Name=LDO49_RS27295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27295;old_locus_tag=BCEP4_530013 NZ_CAJZAV010000261.1 Protein Homology CDS 16773 16997 . + 0 ID=cds-WP_081079480.1;Parent=gene-LDO49_RS27295;Dbxref=GenBank:WP_081079480.1;Name=WP_081079480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886231.1;locus_tag=LDO49_RS27295;product=hypothetical protein;protein_id=WP_081079480.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 17239 18348 . + . ID=gene-LDO49_RS27300;Name=LDO49_RS27300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27300;old_locus_tag=BCEP4_530014 NZ_CAJZAV010000261.1 Protein Homology CDS 17239 18348 . + 0 ID=cds-WP_060147513.1;Parent=gene-LDO49_RS27300;Dbxref=GenBank:WP_060147513.1;Name=WP_060147513.1;Ontology_term=GO:0015846,GO:0019808,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350251.1;locus_tag=LDO49_RS27300;product=polyamine ABC transporter substrate-binding protein;protein_id=WP_060147513.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 18569 19960 . - . ID=gene-LDO49_RS27305;Name=LDO49_RS27305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27305;old_locus_tag=BCEP4_530015 NZ_CAJZAV010000261.1 GeneMarkS-2+ CDS 18569 19960 . - 0 ID=cds-WP_060147455.1;Parent=gene-LDO49_RS27305;Dbxref=GenBank:WP_060147455.1;Name=WP_060147455.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27305;product=hypothetical protein;protein_id=WP_060147455.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 20429 21028 . - . ID=gene-LDO49_RS27310;Name=LDO49_RS27310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27310;old_locus_tag=BCEP4_530017 NZ_CAJZAV010000261.1 Protein Homology CDS 20429 21028 . - 0 ID=cds-WP_060147454.1;Parent=gene-LDO49_RS27310;Dbxref=GenBank:WP_060147454.1;Name=WP_060147454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350263.1;locus_tag=LDO49_RS27310;product=hypothetical protein;protein_id=WP_060147454.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 21025 22272 . - . ID=gene-LDO49_RS27315;Name=LDO49_RS27315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27315;old_locus_tag=BCEP4_530018 NZ_CAJZAV010000261.1 Protein Homology CDS 21025 22272 . - 0 ID=cds-WP_059620378.1;Parent=gene-LDO49_RS27315;Dbxref=GenBank:WP_059620378.1;Name=WP_059620378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754640.1;locus_tag=LDO49_RS27315;product=MFS transporter;protein_id=WP_059620378.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 22570 22899 . - . ID=gene-LDO49_RS27320;Name=LDO49_RS27320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27320;old_locus_tag=BCEP4_530019 NZ_CAJZAV010000261.1 Protein Homology CDS 22570 22899 . - 0 ID=cds-WP_021160121.1;Parent=gene-LDO49_RS27320;Dbxref=GenBank:WP_021160121.1;Name=WP_021160121.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760669.1;locus_tag=LDO49_RS27320;product=H-NS histone family protein;protein_id=WP_021160121.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 23270 24619 . - . ID=gene-LDO49_RS27325;Name=LDO49_RS27325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27325;old_locus_tag=BCEP4_530020 NZ_CAJZAV010000261.1 Protein Homology CDS 23270 24619 . - 0 ID=cds-WP_060147453.1;Parent=gene-LDO49_RS27325;Dbxref=GenBank:WP_060147453.1;Name=WP_060147453.1;Ontology_term=GO:0006974,GO:0003723,GO:0003964,GO:0046872;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA-directed DNA polymerase activity|0003964||IEA,metal ion binding|0046872||IEA;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484833.1;locus_tag=LDO49_RS27325;product=reverse transcriptase family protein;protein_id=WP_060147453.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 24873 25445 . - . ID=gene-LDO49_RS27330;Name=LDO49_RS27330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27330;old_locus_tag=BCEP4_530021 NZ_CAJZAV010000261.1 Protein Homology CDS 24873 25445 . - 0 ID=cds-WP_027792134.1;Parent=gene-LDO49_RS27330;Dbxref=GenBank:WP_027792134.1;Name=WP_027792134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337090.1;locus_tag=LDO49_RS27330;product=plasmid fertility inhibition factor family protein;protein_id=WP_027792134.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 25644 25817 . + . ID=gene-LDO49_RS27335;Name=LDO49_RS27335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27335 NZ_CAJZAV010000261.1 GeneMarkS-2+ CDS 25644 25817 . + 0 ID=cds-WP_155638146.1;Parent=gene-LDO49_RS27335;Dbxref=GenBank:WP_155638146.1;Name=WP_155638146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27335;product=hypothetical protein;protein_id=WP_155638146.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 26070 26342 . + . ID=gene-LDO49_RS27340;Name=LDO49_RS27340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27340;old_locus_tag=BCEP4_530023 NZ_CAJZAV010000261.1 Protein Homology CDS 26070 26342 . + 0 ID=cds-WP_059585916.1;Parent=gene-LDO49_RS27340;Dbxref=GenBank:WP_059585916.1;Name=WP_059585916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756758.1;locus_tag=LDO49_RS27340;product=hypothetical protein;protein_id=WP_059585916.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 26339 26479 . - . ID=gene-LDO49_RS27345;Name=LDO49_RS27345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27345 NZ_CAJZAV010000261.1 GeneMarkS-2+ CDS 26339 26479 . - 0 ID=cds-WP_155638145.1;Parent=gene-LDO49_RS27345;Dbxref=GenBank:WP_155638145.1;Name=WP_155638145.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27345;product=hypothetical protein;protein_id=WP_155638145.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 26772 27200 . + . ID=gene-LDO49_RS27350;Name=LDO49_RS27350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27350;old_locus_tag=BCEP4_530025 NZ_CAJZAV010000261.1 Protein Homology CDS 26772 27200 . + 0 ID=cds-WP_021160115.1;Parent=gene-LDO49_RS27350;Dbxref=GenBank:WP_021160115.1;Name=WP_021160115.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013098.6;locus_tag=LDO49_RS27350;product=VOC family protein;protein_id=WP_021160115.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 27342 28325 . - . ID=gene-LDO49_RS27355;Name=LDO49_RS27355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27355;old_locus_tag=BCEP4_530026 NZ_CAJZAV010000261.1 Protein Homology CDS 27342 28325 . - 0 ID=cds-WP_060147452.1;Parent=gene-LDO49_RS27355;Dbxref=GenBank:WP_060147452.1;Name=WP_060147452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484839.1;locus_tag=LDO49_RS27355;product=succinylglutamate desuccinylase/aspartoacylase domain-containing protein;protein_id=WP_060147452.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 28407 29735 . - . ID=gene-LDO49_RS27360;Name=LDO49_RS27360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27360;old_locus_tag=BCEP4_530027 NZ_CAJZAV010000261.1 Protein Homology CDS 28407 29735 . - 0 ID=cds-WP_021160113.1;Parent=gene-LDO49_RS27360;Dbxref=GenBank:WP_021160113.1;Name=WP_021160113.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350286.1;locus_tag=LDO49_RS27360;product=MFS transporter;protein_id=WP_021160113.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 29916 30824 . - . ID=gene-LDO49_RS27365;Name=LDO49_RS27365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27365;old_locus_tag=BCEP4_530028 NZ_CAJZAV010000261.1 Protein Homology CDS 29916 30824 . - 0 ID=cds-WP_060147451.1;Parent=gene-LDO49_RS27365;Dbxref=GenBank:WP_060147451.1;Name=WP_060147451.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350287.1;locus_tag=LDO49_RS27365;product=LysR family transcriptional regulator;protein_id=WP_060147451.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 30964 31917 . - . ID=gene-LDO49_RS27370;Name=LDO49_RS27370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27370;old_locus_tag=BCEP4_530029 NZ_CAJZAV010000261.1 Protein Homology CDS 30964 31917 . - 0 ID=cds-WP_060147450.1;Parent=gene-LDO49_RS27370;Dbxref=GenBank:WP_060147450.1;Name=WP_060147450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880645.1;locus_tag=LDO49_RS27370;product=dTDP-4-dehydrorhamnose reductase family protein;protein_id=WP_060147450.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 32008 32865 . - . ID=gene-LDO49_RS27375;Name=LDO49_RS27375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27375;old_locus_tag=BCEP4_530030 NZ_CAJZAV010000261.1 Protein Homology CDS 32008 32865 . - 0 ID=cds-WP_224052571.1;Parent=gene-LDO49_RS27375;Dbxref=GenBank:WP_224052571.1;Name=WP_224052571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350290.1;locus_tag=LDO49_RS27375;product=DUF6708 domain-containing protein;protein_id=WP_224052571.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 32905 33096 . - . ID=gene-LDO49_RS27380;Name=LDO49_RS27380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27380;old_locus_tag=BCEP4_530031 NZ_CAJZAV010000261.1 GeneMarkS-2+ CDS 32905 33096 . - 0 ID=cds-WP_059863305.1;Parent=gene-LDO49_RS27380;Dbxref=GenBank:WP_059863305.1;Name=WP_059863305.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27380;product=hypothetical protein;protein_id=WP_059863305.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 33154 34230 . - . ID=gene-LDO49_RS27385;Name=LDO49_RS27385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27385;old_locus_tag=BCEP4_530032 NZ_CAJZAV010000261.1 Protein Homology CDS 33154 34230 . - 0 ID=cds-WP_081065264.1;Parent=gene-LDO49_RS27385;Dbxref=GenBank:WP_081065264.1;Name=WP_081065264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350292.1;locus_tag=LDO49_RS27385;product=DUF6708 domain-containing protein;protein_id=WP_081065264.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 34236 36914 . - . ID=gene-LDO49_RS27390;Name=LDO49_RS27390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27390;old_locus_tag=BCEP4_530033 NZ_CAJZAV010000261.1 Protein Homology CDS 34236 36914 . - 0 ID=cds-WP_059863308.1;Parent=gene-LDO49_RS27390;Dbxref=GenBank:WP_059863308.1;Name=WP_059863308.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF041559.1;locus_tag=LDO49_RS27390;product=T6SS effector BTH_I2691 family protein;protein_id=WP_059863308.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 36914 37819 . - . ID=gene-LDO49_RS27395;Name=LDO49_RS27395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27395;old_locus_tag=BCEP4_530034 NZ_CAJZAV010000261.1 Protein Homology CDS 36914 37819 . - 0 ID=cds-WP_059492506.1;Parent=gene-LDO49_RS27395;Dbxref=GenBank:WP_059492506.1;Name=WP_059492506.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024894.6;locus_tag=LDO49_RS27395;product=DUF4123 domain-containing protein;protein_id=WP_059492506.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 37822 40665 . - . ID=gene-LDO49_RS27400;Name=LDO49_RS27400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27400;old_locus_tag=BCEP4_530035 NZ_CAJZAV010000261.1 Protein Homology CDS 37822 40665 . - 0 ID=cds-WP_060147447.1;Parent=gene-LDO49_RS27400;Dbxref=GenBank:WP_060147447.1;Name=WP_060147447.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350295.1;locus_tag=LDO49_RS27400;product=type VI secretion system Vgr family protein;protein_id=WP_060147447.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 41406 41903 . - . ID=gene-LDO49_RS27405;Name=LDO49_RS27405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27405;old_locus_tag=BCEP4_530037 NZ_CAJZAV010000261.1 Protein Homology CDS 41406 41903 . - 0 ID=cds-WP_059863312.1;Parent=gene-LDO49_RS27405;Dbxref=GenBank:WP_059863312.1;Name=WP_059863312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350296.1;locus_tag=LDO49_RS27405;product=hypothetical protein;protein_id=WP_059863312.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 41990 45331 . - . ID=gene-LDO49_RS27410;Name=LDO49_RS27410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27410;old_locus_tag=BCEP4_530038 NZ_CAJZAV010000261.1 Protein Homology CDS 41990 45331 . - 0 ID=cds-WP_060147446.1;Parent=gene-LDO49_RS27410;Dbxref=GenBank:WP_060147446.1;Name=WP_060147446.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009930789.1;locus_tag=LDO49_RS27410;product=type VI secretion system Vgr family protein;protein_id=WP_060147446.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 45388 46110 . - . ID=gene-LDO49_RS27415;Name=LDO49_RS27415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27415;old_locus_tag=BCEP4_530039 NZ_CAJZAV010000261.1 Protein Homology CDS 45388 46110 . - 0 ID=cds-WP_224052572.1;Parent=gene-LDO49_RS27415;Dbxref=GenBank:WP_224052572.1;Name=WP_224052572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350299.1;locus_tag=LDO49_RS27415;product=hypothetical protein;protein_id=WP_224052572.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 46167 47417 . - . ID=gene-LDO49_RS27420;Name=LDO49_RS27420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27420;old_locus_tag=BCEP4_530040 NZ_CAJZAV010000261.1 Protein Homology CDS 46167 47417 . - 0 ID=cds-WP_059555181.1;Parent=gene-LDO49_RS27420;Dbxref=GenBank:WP_059555181.1;Name=WP_059555181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350300.1;locus_tag=LDO49_RS27420;product=hypothetical protein;protein_id=WP_059555181.1;transl_table=11 NZ_CAJZAV010000261.1 RefSeq gene 47404 48119 . - . ID=gene-LDO49_RS27425;Name=LDO49_RS27425;end_range=48119,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27425;old_locus_tag=BCEP4_530041;partial=true NZ_CAJZAV010000261.1 Protein Homology CDS 47404 48119 . - 2 ID=cds-WP_224052573.1;Parent=gene-LDO49_RS27425;Dbxref=GenBank:WP_224052573.1;Name=WP_224052573.1;end_range=48119,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350301.1;locus_tag=LDO49_RS27425;partial=true;product=DUF2345 domain-containing protein;protein_id=WP_224052573.1;transl_table=11 ##sequence-region NZ_CAJZAV010000262.1 1 106272 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000262.1 RefSeq region 1 106272 . + . ID=NZ_CAJZAV010000262.1:1..106272;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_54 NZ_CAJZAV010000262.1 RefSeq gene 26 835 . + . ID=gene-LDO49_RS27430;Name=LDO49_RS27430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27430;old_locus_tag=BCEP4_540001 NZ_CAJZAV010000262.1 Protein Homology CDS 26 835 . + 0 ID=cds-WP_059856508.1;Parent=gene-LDO49_RS27430;Dbxref=GenBank:WP_059856508.1;Name=WP_059856508.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756202.1;locus_tag=LDO49_RS27430;product=helix-turn-helix transcriptional regulator;protein_id=WP_059856508.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 980 2713 . + . ID=gene-LDO49_RS27435;Name=LDO49_RS27435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27435;old_locus_tag=BCEP4_540002 NZ_CAJZAV010000262.1 Protein Homology CDS 980 2713 . + 0 ID=cds-WP_124843148.1;Parent=gene-LDO49_RS27435;Dbxref=GenBank:WP_124843148.1;Name=WP_124843148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753218.1;locus_tag=LDO49_RS27435;product=FAD-dependent oxidoreductase;protein_id=WP_124843148.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 2710 2922 . + . ID=gene-LDO49_RS27440;Name=LDO49_RS27440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27440;old_locus_tag=BCEP4_540003 NZ_CAJZAV010000262.1 Protein Homology CDS 2710 2922 . + 0 ID=cds-WP_021163939.1;Parent=gene-LDO49_RS27440;Dbxref=GenBank:WP_021163939.1;Name=WP_021163939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485726.1;locus_tag=LDO49_RS27440;product=hypothetical protein;protein_id=WP_021163939.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 3185 3439 . + . ID=gene-LDO49_RS27445;Name=LDO49_RS27445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27445;old_locus_tag=BCEP4_540004 NZ_CAJZAV010000262.1 Protein Homology CDS 3185 3439 . + 0 ID=cds-WP_027788093.1;Parent=gene-LDO49_RS27445;Dbxref=GenBank:WP_027788093.1;Name=WP_027788093.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897763.1;locus_tag=LDO49_RS27445;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_027788093.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq pseudogene 3519 3794 . - . ID=gene-LDO49_RS27450;Name=LDO49_RS27450;end_range=3794,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS27450;partial=true;pseudo=true NZ_CAJZAV010000262.1 Protein Homology CDS 3519 3794 . - 0 ID=cds-LDO49_RS27450;Parent=gene-LDO49_RS27450;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=3794,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897764.1;locus_tag=LDO49_RS27450;partial=true;product=TlpA family protein disulfide reductase;pseudo=true;transl_table=11 NZ_CAJZAV010000262.1 RefSeq pseudogene 3789 4129 . - . ID=gene-LDO49_RS27455;Name=LDO49_RS27455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS27455;old_locus_tag=BCEP4_540005;partial=true;pseudo=true;start_range=.,3789 NZ_CAJZAV010000262.1 Protein Homology CDS 3789 4129 . - 0 ID=cds-LDO49_RS27455;Parent=gene-LDO49_RS27455;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010105613.1;locus_tag=LDO49_RS27455;partial=true;product=exo-alpha-sialidase;pseudo=true;start_range=.,3789;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 4117 6480 . - . ID=gene-LDO49_RS27460;Name=LDO49_RS27460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27460;old_locus_tag=BCEP4_540006 NZ_CAJZAV010000262.1 Protein Homology CDS 4117 6480 . - 0 ID=cds-WP_060073656.1;Parent=gene-LDO49_RS27460;Dbxref=GenBank:WP_060073656.1;Name=WP_060073656.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476610.1;locus_tag=LDO49_RS27460;product=TonB-dependent receptor;protein_id=WP_060073656.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 6607 6996 . - . ID=gene-LDO49_RS27465;Name=LDO49_RS27465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27465;old_locus_tag=BCEP4_540007 NZ_CAJZAV010000262.1 Protein Homology CDS 6607 6996 . - 0 ID=cds-WP_060073658.1;Parent=gene-LDO49_RS27465;Dbxref=GenBank:WP_060073658.1;Name=WP_060073658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486673.1;locus_tag=LDO49_RS27465;product=DUF2946 domain-containing protein;protein_id=WP_060073658.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 7195 7341 . + . ID=gene-LDO49_RS27470;Name=LDO49_RS27470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27470;old_locus_tag=BCEP4_540008 NZ_CAJZAV010000262.1 Protein Homology CDS 7195 7341 . + 0 ID=cds-WP_006756195.1;Parent=gene-LDO49_RS27470;Dbxref=GenBank:WP_006756195.1;Name=WP_006756195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010105617.1;locus_tag=LDO49_RS27470;product=hypothetical protein;protein_id=WP_006756195.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 7565 8164 . + . ID=gene-LDO49_RS27475;Name=LDO49_RS27475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27475;old_locus_tag=BCEP4_540009 NZ_CAJZAV010000262.1 Protein Homology CDS 7565 8164 . + 0 ID=cds-WP_060073660.1;Parent=gene-LDO49_RS27475;Dbxref=GenBank:WP_060073660.1;Name=WP_060073660.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476613.1;locus_tag=LDO49_RS27475;product=chorismate mutase;protein_id=WP_060073660.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 8183 9322 . - . ID=gene-LDO49_RS27480;Name=LDO49_RS27480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27480;old_locus_tag=BCEP4_540010 NZ_CAJZAV010000262.1 Protein Homology CDS 8183 9322 . - 0 ID=cds-WP_048024309.1;Parent=gene-LDO49_RS27480;Dbxref=GenBank:WP_048024309.1;Name=WP_048024309.1;Ontology_term=GO:0004527;gbkey=CDS;go_function=exonuclease activity|0004527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351290.1;locus_tag=LDO49_RS27480;product=exonuclease domain-containing protein;protein_id=WP_048024309.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 9464 9667 . - . ID=gene-LDO49_RS27485;Name=LDO49_RS27485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27485;old_locus_tag=BCEP4_540011 NZ_CAJZAV010000262.1 Protein Homology CDS 9464 9667 . - 0 ID=cds-WP_060073662.1;Parent=gene-LDO49_RS27485;Dbxref=GenBank:WP_060073662.1;Name=WP_060073662.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400778.1;locus_tag=LDO49_RS27485;product=cold-shock protein;protein_id=WP_060073662.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 10067 10333 . + . ID=gene-LDO49_RS27490;Name=LDO49_RS27490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27490;old_locus_tag=BCEP4_540013 NZ_CAJZAV010000262.1 Protein Homology CDS 10067 10333 . + 0 ID=cds-WP_048024307.1;Parent=gene-LDO49_RS27490;Dbxref=GenBank:WP_048024307.1;Name=WP_048024307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400779.1;locus_tag=LDO49_RS27490;product=hypothetical protein;protein_id=WP_048024307.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 10831 11976 . + . ID=gene-LDO49_RS27495;Name=LDO49_RS27495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27495;old_locus_tag=BCEP4_540014 NZ_CAJZAV010000262.1 Protein Homology CDS 10831 11976 . + 0 ID=cds-WP_021163930.1;Parent=gene-LDO49_RS27495;Dbxref=GenBank:WP_021163930.1;Name=WP_021163930.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194869.1;locus_tag=LDO49_RS27495;product=porin;protein_id=WP_021163930.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 12060 12623 . - . ID=gene-LDO49_RS27500;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=LDO49_RS27500;old_locus_tag=BCEP4_540015 NZ_CAJZAV010000262.1 Protein Homology CDS 12060 12623 . - 0 ID=cds-WP_021163929.1;Parent=gene-LDO49_RS27500;Dbxref=GenBank:WP_021163929.1;Name=WP_021163929.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185709.1;locus_tag=LDO49_RS27500;product=transcription elongation factor GreB;protein_id=WP_021163929.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 12984 15350 . - . ID=gene-LDO49_RS27505;Name=LDO49_RS27505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27505;old_locus_tag=BCEP4_540016 NZ_CAJZAV010000262.1 Protein Homology CDS 12984 15350 . - 0 ID=cds-WP_021164124.1;Parent=gene-LDO49_RS27505;Dbxref=GenBank:WP_021164124.1;Name=WP_021164124.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194871.1;locus_tag=LDO49_RS27505;product=RelA/SpoT family protein;protein_id=WP_021164124.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 15414 15617 . - . ID=gene-LDO49_RS27510;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=LDO49_RS27510;old_locus_tag=BCEP4_540017 NZ_CAJZAV010000262.1 Protein Homology CDS 15414 15617 . - 0 ID=cds-WP_006025620.1;Parent=gene-LDO49_RS27510;Dbxref=GenBank:WP_006025620.1;Name=WP_006025620.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008921215.1;locus_tag=LDO49_RS27510;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_006025620.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 15676 16359 . - . ID=gene-LDO49_RS27515;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=LDO49_RS27515;old_locus_tag=BCEP4_540018 NZ_CAJZAV010000262.1 Protein Homology CDS 15676 16359 . - 0 ID=cds-WP_021164125.1;Parent=gene-LDO49_RS27515;Dbxref=GenBank:WP_021164125.1;Name=WP_021164125.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486663.1;locus_tag=LDO49_RS27515;product=guanylate kinase;protein_id=WP_021164125.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 16367 17290 . - . ID=gene-LDO49_RS27520;Name=LDO49_RS27520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27520;old_locus_tag=BCEP4_540019 NZ_CAJZAV010000262.1 Protein Homology CDS 16367 17290 . - 0 ID=cds-WP_021164126.1;Parent=gene-LDO49_RS27520;Dbxref=GenBank:WP_021164126.1;Name=WP_021164126.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333042.1;locus_tag=LDO49_RS27520;product=YicC/YloC family endoribonuclease;protein_id=WP_021164126.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 17464 18195 . + . ID=gene-LDO49_RS27525;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=LDO49_RS27525;old_locus_tag=BCEP4_540020 NZ_CAJZAV010000262.1 Protein Homology CDS 17464 18195 . + 0 ID=cds-WP_059652323.1;Parent=gene-LDO49_RS27525;Dbxref=GenBank:WP_059652323.1;Name=WP_059652323.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025617.1;locus_tag=LDO49_RS27525;product=ribonuclease PH;protein_id=WP_059652323.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 18197 18823 . + . ID=gene-LDO49_RS27530;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=LDO49_RS27530;old_locus_tag=BCEP4_540021 NZ_CAJZAV010000262.1 Protein Homology CDS 18197 18823 . + 0 ID=cds-WP_021164128.1;Parent=gene-LDO49_RS27530;Dbxref=GenBank:WP_021164128.1;Name=WP_021164128.1;Ontology_term=GO:0006281,GO:0035870,GO:0036222;gbkey=CDS;gene=rdgB;go_function=dITP diphosphatase activity|0035870||IEA,XTP diphosphatase activity|0036222||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328099.1;locus_tag=LDO49_RS27530;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_021164128.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 18858 20072 . + . ID=gene-LDO49_RS27535;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=LDO49_RS27535;old_locus_tag=BCEP4_540022 NZ_CAJZAV010000262.1 Protein Homology CDS 18858 20072 . + 0 ID=cds-WP_060073664.1;Parent=gene-LDO49_RS27535;Dbxref=GenBank:WP_060073664.1;Name=WP_060073664.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496579.1;locus_tag=LDO49_RS27535;product=radical SAM family heme chaperone HemW;protein_id=WP_060073664.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 20117 20204 . + . ID=gene-LDO49_RS27540;Name=LDO49_RS27540;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS27540;old_locus_tag=BCEP4_TRNA12 NZ_CAJZAV010000262.1 tRNAscan-SE tRNA 20117 20204 . + . ID=rna-LDO49_RS27540;Parent=gene-LDO49_RS27540;anticodon=(pos:20151..20153);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS27540;product=tRNA-Ser NZ_CAJZAV010000262.1 tRNAscan-SE exon 20117 20204 . + . ID=exon-LDO49_RS27540-1;Parent=rna-LDO49_RS27540;anticodon=(pos:20151..20153);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS27540;product=tRNA-Ser NZ_CAJZAV010000262.1 RefSeq gene 20306 20662 . + . ID=gene-LDO49_RS27545;Name=LDO49_RS27545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27545;old_locus_tag=BCEP4_540023 NZ_CAJZAV010000262.1 GeneMarkS-2+ CDS 20306 20662 . + 0 ID=cds-WP_155634221.1;Parent=gene-LDO49_RS27545;Dbxref=GenBank:WP_155634221.1;Name=WP_155634221.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27545;product=hypothetical protein;protein_id=WP_155634221.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 20772 21062 . - . ID=gene-LDO49_RS27550;Name=LDO49_RS27550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27550;old_locus_tag=BCEP4_540024 NZ_CAJZAV010000262.1 Protein Homology CDS 20772 21062 . - 0 ID=cds-WP_060073666.1;Parent=gene-LDO49_RS27550;Dbxref=GenBank:WP_060073666.1;Name=WP_060073666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216670.1;locus_tag=LDO49_RS27550;product=hypothetical protein;protein_id=WP_060073666.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 21074 21361 . - . ID=gene-LDO49_RS27555;Name=LDO49_RS27555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27555;old_locus_tag=BCEP4_540025 NZ_CAJZAV010000262.1 GeneMarkS-2+ CDS 21074 21361 . - 0 ID=cds-WP_060148045.1;Parent=gene-LDO49_RS27555;Dbxref=GenBank:WP_060148045.1;Name=WP_060148045.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27555;product=hypothetical protein;protein_id=WP_060148045.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 21354 21557 . - . ID=gene-LDO49_RS27560;Name=LDO49_RS27560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27560;old_locus_tag=BCEP4_540026 NZ_CAJZAV010000262.1 GeneMarkS-2+ CDS 21354 21557 . - 0 ID=cds-WP_060073668.1;Parent=gene-LDO49_RS27560;Dbxref=GenBank:WP_060073668.1;Name=WP_060073668.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27560;product=hypothetical protein;protein_id=WP_060073668.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 21550 21792 . - . ID=gene-LDO49_RS27565;Name=LDO49_RS27565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27565;old_locus_tag=BCEP4_540027 NZ_CAJZAV010000262.1 GeneMarkS-2+ CDS 21550 21792 . - 0 ID=cds-WP_060073670.1;Parent=gene-LDO49_RS27565;Dbxref=GenBank:WP_060073670.1;Name=WP_060073670.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27565;product=hypothetical protein;protein_id=WP_060073670.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 21785 22003 . - . ID=gene-LDO49_RS27570;Name=LDO49_RS27570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27570;old_locus_tag=BCEP4_540028 NZ_CAJZAV010000262.1 GeneMarkS-2+ CDS 21785 22003 . - 0 ID=cds-WP_060073672.1;Parent=gene-LDO49_RS27570;Dbxref=GenBank:WP_060073672.1;Name=WP_060073672.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27570;product=hypothetical protein;protein_id=WP_060073672.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 21996 22187 . - . ID=gene-LDO49_RS27575;Name=LDO49_RS27575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27575;old_locus_tag=BCEP4_540029 NZ_CAJZAV010000262.1 GeneMarkS-2+ CDS 21996 22187 . - 0 ID=cds-WP_060073674.1;Parent=gene-LDO49_RS27575;Dbxref=GenBank:WP_060073674.1;Name=WP_060073674.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27575;product=hypothetical protein;protein_id=WP_060073674.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 22180 22485 . - . ID=gene-LDO49_RS27580;Name=LDO49_RS27580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27580 NZ_CAJZAV010000262.1 GeneMarkS-2+ CDS 22180 22485 . - 0 ID=cds-WP_155634222.1;Parent=gene-LDO49_RS27580;Dbxref=GenBank:WP_155634222.1;Name=WP_155634222.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27580;product=hypothetical protein;protein_id=WP_155634222.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 22571 22825 . + . ID=gene-LDO49_RS27585;Name=LDO49_RS27585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27585;old_locus_tag=BCEP4_540030 NZ_CAJZAV010000262.1 Protein Homology CDS 22571 22825 . + 0 ID=cds-WP_060148047.1;Parent=gene-LDO49_RS27585;Dbxref=GenBank:WP_060148047.1;Name=WP_060148047.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF015807.6;locus_tag=LDO49_RS27585;product=Arc family DNA-binding protein;protein_id=WP_060148047.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 22830 23096 . - . ID=gene-LDO49_RS27590;Name=LDO49_RS27590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27590;old_locus_tag=BCEP4_540031 NZ_CAJZAV010000262.1 Protein Homology CDS 22830 23096 . - 0 ID=cds-WP_060073678.1;Parent=gene-LDO49_RS27590;Dbxref=GenBank:WP_060073678.1;Name=WP_060073678.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025352.6;locus_tag=LDO49_RS27590;product=DUF4224 domain-containing protein;protein_id=WP_060073678.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 23329 23778 . - . ID=gene-LDO49_RS27595;Name=LDO49_RS27595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27595;old_locus_tag=BCEP4_540033 NZ_CAJZAV010000262.1 GeneMarkS-2+ CDS 23329 23778 . - 0 ID=cds-WP_060073680.1;Parent=gene-LDO49_RS27595;Dbxref=GenBank:WP_060073680.1;Name=WP_060073680.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27595;product=hypothetical protein;protein_id=WP_060073680.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 23799 24206 . - . ID=gene-LDO49_RS27600;Name=LDO49_RS27600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27600;old_locus_tag=BCEP4_540034 NZ_CAJZAV010000262.1 Protein Homology CDS 23799 24206 . - 0 ID=cds-WP_060073681.1;Parent=gene-LDO49_RS27600;Dbxref=GenBank:WP_060073681.1;Name=WP_060073681.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021556.6;locus_tag=LDO49_RS27600;product=DUF2280 domain-containing protein;protein_id=WP_060073681.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 24274 24711 . - . ID=gene-LDO49_RS27605;Name=LDO49_RS27605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27605;old_locus_tag=BCEP4_540035 NZ_CAJZAV010000262.1 GeneMarkS-2+ CDS 24274 24711 . - 0 ID=cds-WP_060073683.1;Parent=gene-LDO49_RS27605;Dbxref=GenBank:WP_060073683.1;Name=WP_060073683.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27605;product=hypothetical protein;protein_id=WP_060073683.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 24710 24889 . + . ID=gene-LDO49_RS27610;Name=LDO49_RS27610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27610;old_locus_tag=BCEP4_540036 NZ_CAJZAV010000262.1 GeneMarkS-2+ CDS 24710 24889 . + 0 ID=cds-WP_155634223.1;Parent=gene-LDO49_RS27610;Dbxref=GenBank:WP_155634223.1;Name=WP_155634223.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27610;product=hypothetical protein;protein_id=WP_155634223.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 24912 25925 . - . ID=gene-LDO49_RS27615;Name=LDO49_RS27615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27615;old_locus_tag=BCEP4_540037 NZ_CAJZAV010000262.1 Protein Homology CDS 24912 25925 . - 0 ID=cds-WP_060073687.1;Parent=gene-LDO49_RS27615;Dbxref=GenBank:WP_060073687.1;Name=WP_060073687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875609.1;locus_tag=LDO49_RS27615;product=phage protein;protein_id=WP_060073687.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 26127 27872 . - . ID=gene-LDO49_RS27620;Name=LDO49_RS27620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27620;old_locus_tag=BCEP4_540039 NZ_CAJZAV010000262.1 Protein Homology CDS 26127 27872 . - 0 ID=cds-WP_060073691.1;Parent=gene-LDO49_RS27620;Dbxref=GenBank:WP_060073691.1;Name=WP_060073691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764391.1;locus_tag=LDO49_RS27620;product=phage tail tip lysozyme;protein_id=WP_060073691.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 27865 28050 . - . ID=gene-LDO49_RS27625;Name=LDO49_RS27625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27625;old_locus_tag=BCEP4_540040 NZ_CAJZAV010000262.1 Protein Homology CDS 27865 28050 . - 0 ID=cds-WP_060073693.1;Parent=gene-LDO49_RS27625;Dbxref=GenBank:WP_060073693.1;Name=WP_060073693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488906.1;locus_tag=LDO49_RS27625;product=DUF6889 family protein;protein_id=WP_060073693.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 28047 28547 . - . ID=gene-LDO49_RS27630;Name=LDO49_RS27630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27630;old_locus_tag=BCEP4_540041 NZ_CAJZAV010000262.1 Protein Homology CDS 28047 28547 . - 0 ID=cds-WP_060073696.1;Parent=gene-LDO49_RS27630;Dbxref=GenBank:WP_060073696.1;Name=WP_060073696.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006388471.1;locus_tag=LDO49_RS27630;product=phage tail assembly chaperone;protein_id=WP_060073696.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 28746 28994 . - . ID=gene-LDO49_RS27635;Name=LDO49_RS27635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27635 NZ_CAJZAV010000262.1 GeneMarkS-2+ CDS 28746 28994 . - 0 ID=cds-WP_060073698.1;Parent=gene-LDO49_RS27635;Dbxref=GenBank:WP_060073698.1;Name=WP_060073698.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27635;product=hypothetical protein;protein_id=WP_060073698.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 28991 29890 . - . ID=gene-LDO49_RS27640;Name=LDO49_RS27640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27640;old_locus_tag=BCEP4_540042 NZ_CAJZAV010000262.1 GeneMarkS-2+ CDS 28991 29890 . - 0 ID=cds-WP_060073700.1;Parent=gene-LDO49_RS27640;Dbxref=GenBank:WP_060073700.1;Name=WP_060073700.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27640;product=hypothetical protein;protein_id=WP_060073700.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 29887 30114 . - . ID=gene-LDO49_RS27645;Name=LDO49_RS27645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27645;old_locus_tag=BCEP4_540043 NZ_CAJZAV010000262.1 GeneMarkS-2+ CDS 29887 30114 . - 0 ID=cds-WP_060073702.1;Parent=gene-LDO49_RS27645;Dbxref=GenBank:WP_060073702.1;Name=WP_060073702.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27645;product=hypothetical protein;protein_id=WP_060073702.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 30151 30741 . - . ID=gene-LDO49_RS27650;Name=LDO49_RS27650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27650;old_locus_tag=BCEP4_540044 NZ_CAJZAV010000262.1 GeneMarkS-2+ CDS 30151 30741 . - 0 ID=cds-WP_060073704.1;Parent=gene-LDO49_RS27650;Dbxref=GenBank:WP_060073704.1;Name=WP_060073704.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27650;product=hypothetical protein;protein_id=WP_060073704.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 30738 31946 . - . ID=gene-LDO49_RS27655;Name=LDO49_RS27655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27655;old_locus_tag=BCEP4_540045 NZ_CAJZAV010000262.1 Protein Homology CDS 30738 31946 . - 0 ID=cds-WP_081067331.1;Parent=gene-LDO49_RS27655;Dbxref=GenBank:WP_081067331.1;Name=WP_081067331.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01610.1;locus_tag=LDO49_RS27655;product=replication protein;protein_id=WP_081067331.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 31959 32249 . - . ID=gene-LDO49_RS27660;Name=LDO49_RS27660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27660;old_locus_tag=BCEP4_540046 NZ_CAJZAV010000262.1 GeneMarkS-2+ CDS 31959 32249 . - 0 ID=cds-WP_060073706.1;Parent=gene-LDO49_RS27660;Dbxref=GenBank:WP_060073706.1;Name=WP_060073706.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27660;product=hypothetical protein;protein_id=WP_060073706.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 32246 32464 . - . ID=gene-LDO49_RS27665;Name=LDO49_RS27665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27665 NZ_CAJZAV010000262.1 Protein Homology CDS 32246 32464 . - 0 ID=cds-WP_081067332.1;Parent=gene-LDO49_RS27665;Dbxref=GenBank:WP_081067332.1;Name=WP_081067332.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020747743.1;locus_tag=LDO49_RS27665;product=helix-turn-helix transcriptional regulator;protein_id=WP_081067332.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 32672 33370 . - . ID=gene-LDO49_RS27670;Name=LDO49_RS27670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27670;old_locus_tag=BCEP4_540048 NZ_CAJZAV010000262.1 GeneMarkS-2+ CDS 32672 33370 . - 0 ID=cds-WP_060073708.1;Parent=gene-LDO49_RS27670;Dbxref=GenBank:WP_060073708.1;Name=WP_060073708.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27670;product=hypothetical protein;protein_id=WP_060073708.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 33391 34635 . - . ID=gene-LDO49_RS27675;Name=LDO49_RS27675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27675;old_locus_tag=BCEP4_540049 NZ_CAJZAV010000262.1 Protein Homology CDS 33391 34635 . - 0 ID=cds-WP_060073710.1;Parent=gene-LDO49_RS27675;Dbxref=GenBank:WP_060073710.1;Name=WP_060073710.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013205577.1;locus_tag=LDO49_RS27675;product=tyrosine-type recombinase/integrase;protein_id=WP_060073710.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 34945 35340 . + . ID=gene-LDO49_RS27680;Name=LDO49_RS27680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27680;old_locus_tag=BCEP4_540050 NZ_CAJZAV010000262.1 Protein Homology CDS 34945 35340 . + 0 ID=cds-WP_021164130.1;Parent=gene-LDO49_RS27680;Dbxref=GenBank:WP_021164130.1;Name=WP_021164130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486642.1;locus_tag=LDO49_RS27680;product=hypothetical protein;protein_id=WP_021164130.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 35574 35867 . + . ID=gene-LDO49_RS27685;Name=LDO49_RS27685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27685;old_locus_tag=BCEP4_540051 NZ_CAJZAV010000262.1 Protein Homology CDS 35574 35867 . + 0 ID=cds-WP_124465857.1;Parent=gene-LDO49_RS27685;Dbxref=GenBank:WP_124465857.1;Name=WP_124465857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400790.1;locus_tag=LDO49_RS27685;product=hypothetical protein;protein_id=WP_124465857.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 36201 36692 . + . ID=gene-LDO49_RS27690;Name=LDO49_RS27690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27690;old_locus_tag=BCEP4_540052 NZ_CAJZAV010000262.1 Protein Homology CDS 36201 36692 . + 0 ID=cds-WP_021164133.1;Parent=gene-LDO49_RS27690;Dbxref=GenBank:WP_021164133.1;Name=WP_021164133.1;Ontology_term=GO:0031992,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=energy transducer activity|0031992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544846.1;locus_tag=LDO49_RS27690;product=energy transducer TonB family protein;protein_id=WP_021164133.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 36987 38297 . + . ID=gene-LDO49_RS27695;Name=LDO49_RS27695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27695;old_locus_tag=BCEP4_540053 NZ_CAJZAV010000262.1 Protein Homology CDS 36987 38297 . + 0 ID=cds-WP_175863702.1;Parent=gene-LDO49_RS27695;Dbxref=GenBank:WP_175863702.1;Name=WP_175863702.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722645.1;locus_tag=LDO49_RS27695;product=MFS transporter;protein_id=WP_175863702.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 38400 38579 . + . ID=gene-LDO49_RS27700;Name=LDO49_RS27700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27700;old_locus_tag=BCEP4_540054 NZ_CAJZAV010000262.1 Protein Homology CDS 38400 38579 . + 0 ID=cds-WP_021164136.1;Parent=gene-LDO49_RS27700;Dbxref=GenBank:WP_021164136.1;Name=WP_021164136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400794.1;locus_tag=LDO49_RS27700;product=hypothetical protein;protein_id=WP_021164136.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 38599 39597 . - . ID=gene-LDO49_RS27705;Name=waaC;gbkey=Gene;gene=waaC;gene_biotype=protein_coding;locus_tag=LDO49_RS27705;old_locus_tag=BCEP4_540055 NZ_CAJZAV010000262.1 Protein Homology CDS 38599 39597 . - 0 ID=cds-WP_224052574.1;Parent=gene-LDO49_RS27705;Dbxref=GenBank:WP_224052574.1;Name=WP_224052574.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=waaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750840.1;locus_tag=LDO49_RS27705;product=lipopolysaccharide heptosyltransferase I;protein_id=WP_224052574.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 39768 41327 . + . ID=gene-LDO49_RS27710;Name=LDO49_RS27710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27710;old_locus_tag=BCEP4_540056 NZ_CAJZAV010000262.1 Protein Homology CDS 39768 41327 . + 0 ID=cds-WP_059709779.1;Parent=gene-LDO49_RS27710;Dbxref=GenBank:WP_059709779.1;Name=WP_059709779.1;Ontology_term=GO:0006821,GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496585.1;locus_tag=LDO49_RS27710;product=chloride channel protein;protein_id=WP_059709779.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 41444 41845 . - . ID=gene-LDO49_RS27715;Name=LDO49_RS27715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27715;old_locus_tag=BCEP4_540057 NZ_CAJZAV010000262.1 Protein Homology CDS 41444 41845 . - 0 ID=cds-WP_059485255.1;Parent=gene-LDO49_RS27715;Dbxref=GenBank:WP_059485255.1;Name=WP_059485255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883705.1;locus_tag=LDO49_RS27715;product=YXWGXW repeat-containing protein;protein_id=WP_059485255.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 42006 42260 . - . ID=gene-LDO49_RS27720;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=LDO49_RS27720;old_locus_tag=BCEP4_540058 NZ_CAJZAV010000262.1 Protein Homology CDS 42006 42260 . - 0 ID=cds-WP_006486661.1;Parent=gene-LDO49_RS27720;Dbxref=GenBank:WP_006486661.1;Name=WP_006486661.1;gbkey=CDS;gene=minE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004628536.1;locus_tag=LDO49_RS27720;product=cell division topological specificity factor MinE;protein_id=WP_006486661.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 42273 43088 . - . ID=gene-LDO49_RS27725;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=LDO49_RS27725;old_locus_tag=BCEP4_540059 NZ_CAJZAV010000262.1 Protein Homology CDS 42273 43088 . - 0 ID=cds-WP_042978309.1;Parent=gene-LDO49_RS27725;Dbxref=GenBank:WP_042978309.1;Name=WP_042978309.1;Ontology_term=GO:0000918,GO:0016887;gbkey=CDS;gene=minD;go_function=ATP hydrolysis activity|0016887||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025606.1;locus_tag=LDO49_RS27725;product=septum site-determining protein MinD;protein_id=WP_042978309.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 43148 43927 . - . ID=gene-LDO49_RS27730;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=LDO49_RS27730;old_locus_tag=BCEP4_540060 NZ_CAJZAV010000262.1 Protein Homology CDS 43148 43927 . - 0 ID=cds-WP_048024177.1;Parent=gene-LDO49_RS27730;Dbxref=GenBank:WP_048024177.1;Name=WP_048024177.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328092.1;locus_tag=LDO49_RS27730;product=septum site-determining protein MinC;protein_id=WP_048024177.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 44097 44609 . - . ID=gene-LDO49_RS27735;Name=LDO49_RS27735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27735;old_locus_tag=BCEP4_540061 NZ_CAJZAV010000262.1 Protein Homology CDS 44097 44609 . - 0 ID=cds-WP_027788116.1;Parent=gene-LDO49_RS27735;Dbxref=GenBank:WP_027788116.1;Name=WP_027788116.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544838.1;locus_tag=LDO49_RS27735;product=GNAT family N-acetyltransferase;protein_id=WP_027788116.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 45274 46434 . + . ID=gene-LDO49_RS27740;Name=LDO49_RS27740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27740;old_locus_tag=BCEP4_540063 NZ_CAJZAV010000262.1 Protein Homology CDS 45274 46434 . + 0 ID=cds-WP_048024179.1;Parent=gene-LDO49_RS27740;Dbxref=GenBank:WP_048024179.1;Name=WP_048024179.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496590.1;locus_tag=LDO49_RS27740;product=alkane 1-monooxygenase;protein_id=WP_048024179.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 46539 48074 . - . ID=gene-LDO49_RS27745;Name=LDO49_RS27745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27745;old_locus_tag=BCEP4_540064 NZ_CAJZAV010000262.1 Protein Homology CDS 46539 48074 . - 0 ID=cds-WP_060073716.1;Parent=gene-LDO49_RS27745;Dbxref=GenBank:WP_060073716.1;Name=WP_060073716.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883695.1;locus_tag=LDO49_RS27745;product=methyl-accepting chemotaxis protein;protein_id=WP_060073716.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 48393 48483 . - . ID=gene-LDO49_RS27750;Name=LDO49_RS27750;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS27750;old_locus_tag=BCEP4_TRNA42 NZ_CAJZAV010000262.1 tRNAscan-SE tRNA 48393 48483 . - . ID=rna-LDO49_RS27750;Parent=gene-LDO49_RS27750;anticodon=(pos:complement(48447..48449));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS27750;product=tRNA-Ser NZ_CAJZAV010000262.1 tRNAscan-SE exon 48393 48483 . - . ID=exon-LDO49_RS27750-1;Parent=rna-LDO49_RS27750;anticodon=(pos:complement(48447..48449));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS27750;product=tRNA-Ser NZ_CAJZAV010000262.1 RefSeq gene 48620 49921 . - . ID=gene-LDO49_RS27755;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=LDO49_RS27755;old_locus_tag=BCEP4_540065 NZ_CAJZAV010000262.1 Protein Homology CDS 48620 49921 . - 0 ID=cds-WP_021163430.1;Parent=gene-LDO49_RS27755;Dbxref=GenBank:WP_021163430.1;Name=WP_021163430.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904317.1;locus_tag=LDO49_RS27755;product=serine--tRNA ligase;protein_id=WP_021163430.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq pseudogene 50184 50451 . + . ID=gene-LDO49_RS27760;Name=LDO49_RS27760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS27760;pseudo=true NZ_CAJZAV010000262.1 Protein Homology CDS 50184 50451 . + 0 ID=cds-LDO49_RS27760;Parent=gene-LDO49_RS27760;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025601.1;locus_tag=LDO49_RS27760;product=DUF2164 domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 50491 51801 . - . ID=gene-LDO49_RS27765;Name=LDO49_RS27765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27765;old_locus_tag=BCEP4_540067 NZ_CAJZAV010000262.1 Protein Homology CDS 50491 51801 . - 0 ID=cds-WP_021163432.1;Parent=gene-LDO49_RS27765;Dbxref=GenBank:WP_021163432.1;Name=WP_021163432.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333010.1;locus_tag=LDO49_RS27765;product=replication-associated recombination protein A;protein_id=WP_021163432.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 52030 52719 . - . ID=gene-LDO49_RS27770;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=LDO49_RS27770;old_locus_tag=BCEP4_540068 NZ_CAJZAV010000262.1 Protein Homology CDS 52030 52719 . - 0 ID=cds-WP_060073718.1;Parent=gene-LDO49_RS27770;Dbxref=GenBank:WP_060073718.1;Name=WP_060073718.1;gbkey=CDS;gene=lolA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750827.1;locus_tag=LDO49_RS27770;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_060073718.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 52766 55075 . - . ID=gene-LDO49_RS27775;Name=LDO49_RS27775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27775;old_locus_tag=BCEP4_540069 NZ_CAJZAV010000262.1 Protein Homology CDS 52766 55075 . - 0 ID=cds-WP_021163434.1;Parent=gene-LDO49_RS27775;Dbxref=GenBank:WP_021163434.1;Name=WP_021163434.1;Ontology_term=GO:0007059,GO:0051301,GO:0003677,GO:0005524,GO:0015616;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,DNA translocase activity|0015616||IEA;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186104.1;locus_tag=LDO49_RS27775;product=DNA translocase FtsK;protein_id=WP_021163434.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 55488 56450 . + . ID=gene-LDO49_RS27780;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=LDO49_RS27780;old_locus_tag=BCEP4_540070 NZ_CAJZAV010000262.1 Protein Homology CDS 55488 56450 . + 0 ID=cds-WP_021163435.1;Parent=gene-LDO49_RS27780;Dbxref=GenBank:WP_021163435.1;Name=WP_021163435.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333007.1;locus_tag=LDO49_RS27780;product=thioredoxin-disulfide reductase;protein_id=WP_021163435.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 56587 57366 . + . ID=gene-LDO49_RS27785;Name=LDO49_RS27785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27785;old_locus_tag=BCEP4_540071 NZ_CAJZAV010000262.1 Protein Homology CDS 56587 57366 . + 0 ID=cds-WP_060073719.1;Parent=gene-LDO49_RS27785;Dbxref=GenBank:WP_060073719.1;Name=WP_060073719.1;Ontology_term=GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897801.1;locus_tag=LDO49_RS27785;product=Smr/MutS family protein;protein_id=WP_060073719.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 57353 57976 . + . ID=gene-LDO49_RS27790;Name=LDO49_RS27790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27790;old_locus_tag=BCEP4_540072 NZ_CAJZAV010000262.1 Protein Homology CDS 57353 57976 . + 0 ID=cds-WP_011351253.1;Parent=gene-LDO49_RS27790;Dbxref=GenBank:WP_011351253.1;Name=WP_011351253.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333005.1;locus_tag=LDO49_RS27790;product=trimeric intracellular cation channel family protein;protein_id=WP_011351253.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 58067 59185 . - . ID=gene-LDO49_RS27795;Name=LDO49_RS27795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27795;old_locus_tag=BCEP4_540073 NZ_CAJZAV010000262.1 Protein Homology CDS 58067 59185 . - 0 ID=cds-WP_021163438.1;Parent=gene-LDO49_RS27795;Dbxref=GenBank:WP_021163438.1;Name=WP_021163438.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440516.1;locus_tag=LDO49_RS27795;product=ABC transporter ATP-binding protein;protein_id=WP_021163438.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 59298 60155 . - . ID=gene-LDO49_RS27800;Name=LDO49_RS27800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27800;old_locus_tag=BCEP4_540074 NZ_CAJZAV010000262.1 Protein Homology CDS 59298 60155 . - 0 ID=cds-WP_011544828.1;Parent=gene-LDO49_RS27800;Dbxref=GenBank:WP_011544828.1;Name=WP_011544828.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764932.1;locus_tag=LDO49_RS27800;product=carbohydrate ABC transporter permease;protein_id=WP_011544828.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 60145 61083 . - . ID=gene-LDO49_RS27805;Name=LDO49_RS27805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27805;old_locus_tag=BCEP4_540075 NZ_CAJZAV010000262.1 Protein Homology CDS 60145 61083 . - 0 ID=cds-WP_042977917.1;Parent=gene-LDO49_RS27805;Dbxref=GenBank:WP_042977917.1;Name=WP_042977917.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025593.1;locus_tag=LDO49_RS27805;product=carbohydrate ABC transporter permease;protein_id=WP_042977917.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 61221 62468 . - . ID=gene-LDO49_RS27810;Name=LDO49_RS27810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27810;old_locus_tag=BCEP4_540076 NZ_CAJZAV010000262.1 Protein Homology CDS 61221 62468 . - 0 ID=cds-WP_059485260.1;Parent=gene-LDO49_RS27810;Dbxref=GenBank:WP_059485260.1;Name=WP_059485260.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185848.1;locus_tag=LDO49_RS27810;product=ABC transporter substrate-binding protein;protein_id=WP_059485260.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 62901 64370 . + . ID=gene-LDO49_RS27815;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=LDO49_RS27815;old_locus_tag=BCEP4_540078 NZ_CAJZAV010000262.1 Protein Homology CDS 62901 64370 . + 0 ID=cds-WP_021163442.1;Parent=gene-LDO49_RS27815;Dbxref=GenBank:WP_021163442.1;Name=WP_021163442.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213936.1;locus_tag=LDO49_RS27815;product=glucose-6-phosphate dehydrogenase;protein_id=WP_021163442.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 64459 65139 . + . ID=gene-LDO49_RS27820;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=LDO49_RS27820;old_locus_tag=BCEP4_540079 NZ_CAJZAV010000262.1 Protein Homology CDS 64459 65139 . + 0 ID=cds-WP_060073721.1;Parent=gene-LDO49_RS27820;Dbxref=GenBank:WP_060073721.1;Name=WP_060073721.1;Ontology_term=GO:0005975,GO:0006098,GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=carbohydrate metabolic process|0005975||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722626.1;locus_tag=LDO49_RS27820;product=6-phosphogluconolactonase;protein_id=WP_060073721.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 65117 67045 . + . ID=gene-LDO49_RS27825;Name=LDO49_RS27825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27825;old_locus_tag=BCEP4_540080 NZ_CAJZAV010000262.1 Protein Homology CDS 65117 67045 . + 0 ID=cds-WP_059485261.1;Parent=gene-LDO49_RS27825;Dbxref=GenBank:WP_059485261.1;Name=WP_059485261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410513.1;locus_tag=LDO49_RS27825;product=bifunctional transcriptional regulator/glucokinase;protein_id=WP_059485261.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 67187 67447 . + . ID=gene-LDO49_RS27830;Name=LDO49_RS27830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27830;old_locus_tag=BCEP4_540081 NZ_CAJZAV010000262.1 Protein Homology CDS 67187 67447 . + 0 ID=cds-WP_021163444.1;Parent=gene-LDO49_RS27830;Dbxref=GenBank:WP_021163444.1;Name=WP_021163444.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028005.6;locus_tag=LDO49_RS27830;product=T6SS amidase immunity protein Tai4 family protein;protein_id=WP_021163444.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 67508 68725 . - . ID=gene-LDO49_RS27835;Name=LDO49_RS27835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27835;old_locus_tag=BCEP4_540082 NZ_CAJZAV010000262.1 Protein Homology CDS 67508 68725 . - 0 ID=cds-WP_224052575.1;Parent=gene-LDO49_RS27835;Dbxref=GenBank:WP_224052575.1;Name=WP_224052575.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755083.1;locus_tag=LDO49_RS27835;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_224052575.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 68981 69433 . + . ID=gene-LDO49_RS27840;Name=LDO49_RS27840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27840;old_locus_tag=BCEP4_540084 NZ_CAJZAV010000262.1 Protein Homology CDS 68981 69433 . + 0 ID=cds-WP_060131046.1;Parent=gene-LDO49_RS27840;Dbxref=GenBank:WP_060131046.1;Name=WP_060131046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764938.1;locus_tag=LDO49_RS27840;product=hypothetical protein;protein_id=WP_060131046.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 69625 70908 . + . ID=gene-LDO49_RS27845;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=LDO49_RS27845;old_locus_tag=BCEP4_540085 NZ_CAJZAV010000262.1 Protein Homology CDS 69625 70908 . + 0 ID=cds-WP_014897811.1;Parent=gene-LDO49_RS27845;Dbxref=GenBank:WP_014897811.1;Name=WP_014897811.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410509.1;locus_tag=LDO49_RS27845;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_014897811.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 70924 72045 . + . ID=gene-LDO49_RS27850;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=LDO49_RS27850;old_locus_tag=BCEP4_540086 NZ_CAJZAV010000262.1 Protein Homology CDS 70924 72045 . + 0 ID=cds-WP_021163449.1;Parent=gene-LDO49_RS27850;Dbxref=GenBank:WP_021163449.1;Name=WP_021163449.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412307.1;locus_tag=LDO49_RS27850;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_021163449.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 72107 72301 . + . ID=gene-LDO49_RS27855;Name=LDO49_RS27855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27855;old_locus_tag=BCEP4_540087 NZ_CAJZAV010000262.1 Protein Homology CDS 72107 72301 . + 0 ID=cds-WP_059856469.1;Parent=gene-LDO49_RS27855;Dbxref=GenBank:WP_059856469.1;Name=WP_059856469.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012881.6;locus_tag=LDO49_RS27855;product=hypothetical protein;protein_id=WP_059856469.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 72646 74415 . + . ID=gene-LDO49_RS27860;Name=LDO49_RS27860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27860;old_locus_tag=BCEP4_540088 NZ_CAJZAV010000262.1 Protein Homology CDS 72646 74415 . + 0 ID=cds-WP_224052577.1;Parent=gene-LDO49_RS27860;Dbxref=GenBank:WP_224052577.1;Name=WP_224052577.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: protein motif:HMM:NF012546.6;locus_tag=LDO49_RS27860;product=S9 family peptidase;protein_id=WP_224052577.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 74584 75102 . + . ID=gene-LDO49_RS27865;Name=LDO49_RS27865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27865;old_locus_tag=BCEP4_540089 NZ_CAJZAV010000262.1 Protein Homology CDS 74584 75102 . + 0 ID=cds-WP_021163454.1;Parent=gene-LDO49_RS27865;Dbxref=GenBank:WP_021163454.1;Name=WP_021163454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363273.1;locus_tag=LDO49_RS27865;product=DUF1993 domain-containing protein;protein_id=WP_021163454.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 75297 76439 . + . ID=gene-LDO49_RS27870;Name=ribBA;gbkey=Gene;gene=ribBA;gene_biotype=protein_coding;locus_tag=LDO49_RS27870;old_locus_tag=BCEP4_540090 NZ_CAJZAV010000262.1 Protein Homology CDS 75297 76439 . + 0 ID=cds-WP_059485266.1;Parent=gene-LDO49_RS27870;Dbxref=GenBank:WP_059485266.1;Name=WP_059485266.1;Ontology_term=GO:0003935,GO:0008686;gbkey=CDS;gene=ribBA;go_function=GTP cyclohydrolase II activity|0003935||IEA,3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484241.1;locus_tag=LDO49_RS27870;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_059485266.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 76493 77011 . + . ID=gene-LDO49_RS27875;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=LDO49_RS27875;old_locus_tag=BCEP4_540091 NZ_CAJZAV010000262.1 Protein Homology CDS 76493 77011 . + 0 ID=cds-WP_011351235.1;Parent=gene-LDO49_RS27875;Dbxref=GenBank:WP_011351235.1;Name=WP_011351235.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186056.1;locus_tag=LDO49_RS27875;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_011351235.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 77008 77445 . + . ID=gene-LDO49_RS27880;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=LDO49_RS27880;old_locus_tag=BCEP4_540092 NZ_CAJZAV010000262.1 Protein Homology CDS 77008 77445 . + 0 ID=cds-WP_027788132.1;Parent=gene-LDO49_RS27880;Dbxref=GenBank:WP_027788132.1;Name=WP_027788132.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897817.1;locus_tag=LDO49_RS27880;product=transcription antitermination factor NusB;protein_id=WP_027788132.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 77518 78714 . + . ID=gene-LDO49_RS27885;Name=LDO49_RS27885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27885;old_locus_tag=BCEP4_540093 NZ_CAJZAV010000262.1 Protein Homology CDS 77518 78714 . + 0 ID=cds-WP_200059671.1;Parent=gene-LDO49_RS27885;Dbxref=GenBank:WP_200059671.1;Name=WP_200059671.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476663.1;locus_tag=LDO49_RS27885;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_200059671.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 78840 79949 . - . ID=gene-LDO49_RS27890;Name=LDO49_RS27890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27890;old_locus_tag=BCEP4_540094 NZ_CAJZAV010000262.1 Protein Homology CDS 78840 79949 . - 0 ID=cds-WP_042973113.1;Parent=gene-LDO49_RS27890;Dbxref=GenBank:WP_042973113.1;Name=WP_042973113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400829.1;locus_tag=LDO49_RS27890;product=lytic transglycosylase domain-containing protein;protein_id=WP_042973113.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 80380 80574 . - . ID=gene-LDO49_RS27895;Name=LDO49_RS27895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27895 NZ_CAJZAV010000262.1 GeneMarkS-2+ CDS 80380 80574 . - 0 ID=cds-WP_124475170.1;Parent=gene-LDO49_RS27895;Dbxref=GenBank:WP_124475170.1;Name=WP_124475170.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS27895;product=hypothetical protein;protein_id=WP_124475170.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 80546 82102 . + . ID=gene-LDO49_RS27900;Name=LDO49_RS27900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27900;old_locus_tag=BCEP4_540096 NZ_CAJZAV010000262.1 Protein Homology CDS 80546 82102 . + 0 ID=cds-WP_042973112.1;Parent=gene-LDO49_RS27900;Dbxref=GenBank:WP_042973112.1;Name=WP_042973112.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897820.1;locus_tag=LDO49_RS27900;product=UbiD family decarboxylase;protein_id=WP_042973112.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 82161 82829 . + . ID=gene-LDO49_RS27905;Name=LDO49_RS27905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27905;old_locus_tag=BCEP4_540097 NZ_CAJZAV010000262.1 Protein Homology CDS 82161 82829 . + 0 ID=cds-WP_048024200.1;Parent=gene-LDO49_RS27905;Dbxref=GenBank:WP_048024200.1;Name=WP_048024200.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476665.1;locus_tag=LDO49_RS27905;product=LysE family translocator;protein_id=WP_048024200.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 82954 83256 . - . ID=gene-LDO49_RS27910;Name=LDO49_RS27910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27910;old_locus_tag=BCEP4_540098 NZ_CAJZAV010000262.1 Protein Homology CDS 82954 83256 . - 0 ID=cds-WP_021157078.1;Parent=gene-LDO49_RS27910;Dbxref=GenBank:WP_021157078.1;Name=WP_021157078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488565.1;locus_tag=LDO49_RS27910;product=hypothetical protein;protein_id=WP_021157078.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 83772 84701 . + . ID=gene-LDO49_RS27915;Name=LDO49_RS27915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27915;old_locus_tag=BCEP4_540099 NZ_CAJZAV010000262.1 Protein Homology CDS 83772 84701 . + 0 ID=cds-WP_060073734.1;Parent=gene-LDO49_RS27915;Dbxref=GenBank:WP_060073734.1;Name=WP_060073734.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496606.1;locus_tag=LDO49_RS27915;product=Rossmann-like and DUF2520 domain-containing protein;protein_id=WP_060073734.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 84777 85340 . + . ID=gene-LDO49_RS27920;Name=LDO49_RS27920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27920;old_locus_tag=BCEP4_540100 NZ_CAJZAV010000262.1 Protein Homology CDS 84777 85340 . + 0 ID=cds-WP_006488584.1;Parent=gene-LDO49_RS27920;Dbxref=GenBank:WP_006488584.1;Name=WP_006488584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010116661.1;locus_tag=LDO49_RS27920;product=YggT family protein;protein_id=WP_006488584.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 85353 85703 . - . ID=gene-LDO49_RS27925;Name=LDO49_RS27925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27925;old_locus_tag=BCEP4_540101 NZ_CAJZAV010000262.1 Protein Homology CDS 85353 85703 . - 0 ID=cds-WP_048024203.1;Parent=gene-LDO49_RS27925;Dbxref=GenBank:WP_048024203.1;Name=WP_048024203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883634.1;locus_tag=LDO49_RS27925;product=DUF190 domain-containing protein;protein_id=WP_048024203.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 85727 86113 . - . ID=gene-LDO49_RS27930;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=LDO49_RS27930;old_locus_tag=BCEP4_540102 NZ_CAJZAV010000262.1 Protein Homology CDS 85727 86113 . - 0 ID=cds-WP_021157075.1;Parent=gene-LDO49_RS27930;Dbxref=GenBank:WP_021157075.1;Name=WP_021157075.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522284.1;locus_tag=LDO49_RS27930;product=fluoride efflux transporter CrcB;protein_id=WP_021157075.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 86311 87183 . - . ID=gene-LDO49_RS27935;Name=LDO49_RS27935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27935;old_locus_tag=BCEP4_540103 NZ_CAJZAV010000262.1 Protein Homology CDS 86311 87183 . - 0 ID=cds-WP_124475169.1;Parent=gene-LDO49_RS27935;Dbxref=GenBank:WP_124475169.1;Name=WP_124475169.1;Ontology_term=GO:0008270,GO:0017136,GO:0046872,GO:0070403;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,histone deacetylase activity%2C NAD-dependent|0017136||IEA,metal ion binding|0046872||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409628.1;locus_tag=LDO49_RS27935;product=SIR2 family NAD-dependent protein deacylase;protein_id=WP_124475169.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 87372 87752 . - . ID=gene-LDO49_RS27940;Name=LDO49_RS27940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27940;old_locus_tag=BCEP4_540104 NZ_CAJZAV010000262.1 Protein Homology CDS 87372 87752 . - 0 ID=cds-WP_021157073.1;Parent=gene-LDO49_RS27940;Dbxref=GenBank:WP_021157073.1;Name=WP_021157073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351223.1;locus_tag=LDO49_RS27940;product=NUDIX hydrolase;protein_id=WP_021157073.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 87749 88348 . - . ID=gene-LDO49_RS27945;Name=LDO49_RS27945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27945;old_locus_tag=BCEP4_540105 NZ_CAJZAV010000262.1 Protein Homology CDS 87749 88348 . - 0 ID=cds-WP_060073737.1;Parent=gene-LDO49_RS27945;Dbxref=GenBank:WP_060073737.1;Name=WP_060073737.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496610.1;locus_tag=LDO49_RS27945;product=NUDIX domain-containing protein;protein_id=WP_060073737.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 88430 89185 . + . ID=gene-LDO49_RS27950;Name=LDO49_RS27950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27950;old_locus_tag=BCEP4_540106 NZ_CAJZAV010000262.1 Protein Homology CDS 88430 89185 . + 0 ID=cds-WP_060073739.1;Parent=gene-LDO49_RS27950;Dbxref=GenBank:WP_060073739.1;Name=WP_060073739.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897830.1;locus_tag=LDO49_RS27950;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_060073739.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 89337 89930 . + . ID=gene-LDO49_RS27955;Name=LDO49_RS27955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27955;old_locus_tag=BCEP4_540107 NZ_CAJZAV010000262.1 Protein Homology CDS 89337 89930 . + 0 ID=cds-WP_060073741.1;Parent=gene-LDO49_RS27955;Dbxref=GenBank:WP_060073741.1;Name=WP_060073741.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213949.1;locus_tag=LDO49_RS27955;product=chromate transporter;protein_id=WP_060073741.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 89927 90469 . + . ID=gene-LDO49_RS27960;Name=LDO49_RS27960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27960;old_locus_tag=BCEP4_540108 NZ_CAJZAV010000262.1 Protein Homology CDS 89927 90469 . + 0 ID=cds-WP_048024209.1;Parent=gene-LDO49_RS27960;Dbxref=GenBank:WP_048024209.1;Name=WP_048024209.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544804.1;locus_tag=LDO49_RS27960;product=chromate transporter;protein_id=WP_048024209.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 90553 91362 . - . ID=gene-LDO49_RS27965;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=LDO49_RS27965;old_locus_tag=BCEP4_540109 NZ_CAJZAV010000262.1 Protein Homology CDS 90553 91362 . - 0 ID=cds-WP_224052578.1;Parent=gene-LDO49_RS27965;Dbxref=GenBank:WP_224052578.1;Name=WP_224052578.1;gbkey=CDS;gene=scpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476678.1;locus_tag=LDO49_RS27965;product=methylmalonyl-CoA decarboxylase;protein_id=WP_224052578.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 91359 92582 . - . ID=gene-LDO49_RS27970;Name=LDO49_RS27970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27970;old_locus_tag=BCEP4_540110 NZ_CAJZAV010000262.1 Protein Homology CDS 91359 92582 . - 0 ID=cds-WP_224052579.1;Parent=gene-LDO49_RS27970;Dbxref=GenBank:WP_224052579.1;Name=WP_224052579.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351217.1;locus_tag=LDO49_RS27970;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_224052579.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 92644 93966 . - . ID=gene-LDO49_RS27975;Name=LDO49_RS27975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27975;old_locus_tag=BCEP4_540111 NZ_CAJZAV010000262.1 Protein Homology CDS 92644 93966 . - 0 ID=cds-WP_021157066.1;Parent=gene-LDO49_RS27975;Dbxref=GenBank:WP_021157066.1;Name=WP_021157066.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476680.1;locus_tag=LDO49_RS27975;product=MFS transporter;protein_id=WP_021157066.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 94137 95066 . + . ID=gene-LDO49_RS27980;Name=LDO49_RS27980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27980;old_locus_tag=BCEP4_540112 NZ_CAJZAV010000262.1 Protein Homology CDS 94137 95066 . + 0 ID=cds-WP_021157065.1;Parent=gene-LDO49_RS27980;Dbxref=GenBank:WP_021157065.1;Name=WP_021157065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351215.1;locus_tag=LDO49_RS27980;product=LysR substrate-binding domain-containing protein;protein_id=WP_021157065.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 95190 95531 . + . ID=gene-LDO49_RS27985;Name=LDO49_RS27985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27985;old_locus_tag=BCEP4_540113 NZ_CAJZAV010000262.1 Protein Homology CDS 95190 95531 . + 0 ID=cds-WP_059678041.1;Parent=gene-LDO49_RS27985;Dbxref=GenBank:WP_059678041.1;Name=WP_059678041.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351214.1;locus_tag=LDO49_RS27985;product=DMT family transporter;protein_id=WP_059678041.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 95544 96704 . - . ID=gene-LDO49_RS27990;Name=LDO49_RS27990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27990;old_locus_tag=BCEP4_540114 NZ_CAJZAV010000262.1 Protein Homology CDS 95544 96704 . - 0 ID=cds-WP_060073745.1;Parent=gene-LDO49_RS27990;Dbxref=GenBank:WP_060073745.1;Name=WP_060073745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752088.1;locus_tag=LDO49_RS27990;product=enolase C-terminal domain-like protein;protein_id=WP_060073745.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 97076 97420 . - . ID=gene-LDO49_RS27995;Name=LDO49_RS27995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS27995;old_locus_tag=BCEP4_540116 NZ_CAJZAV010000262.1 Protein Homology CDS 97076 97420 . - 0 ID=cds-WP_224052580.1;Parent=gene-LDO49_RS27995;Dbxref=GenBank:WP_224052580.1;Name=WP_224052580.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003258412.1;locus_tag=LDO49_RS27995;product=cupin domain-containing protein;protein_id=WP_224052580.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 97656 98243 . - . ID=gene-LDO49_RS28000;Name=LDO49_RS28000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28000;old_locus_tag=BCEP4_540117 NZ_CAJZAV010000262.1 Protein Homology CDS 97656 98243 . - 0 ID=cds-WP_224052581.1;Parent=gene-LDO49_RS28000;Dbxref=GenBank:WP_224052581.1;Name=WP_224052581.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026922.6;locus_tag=LDO49_RS28000;product=Imm72 family immunity protein;protein_id=WP_224052581.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 98399 98473 . + . ID=gene-LDO49_RS28005;Name=LDO49_RS28005;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS28005;old_locus_tag=BCEP4_TRNA13 NZ_CAJZAV010000262.1 tRNAscan-SE tRNA 98399 98473 . + . ID=rna-LDO49_RS28005;Parent=gene-LDO49_RS28005;anticodon=(pos:98432..98434);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS28005;product=tRNA-Gly NZ_CAJZAV010000262.1 tRNAscan-SE exon 98399 98473 . + . ID=exon-LDO49_RS28005-1;Parent=rna-LDO49_RS28005;anticodon=(pos:98432..98434);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS28005;product=tRNA-Gly NZ_CAJZAV010000262.1 RefSeq gene 98607 99374 . + . ID=gene-LDO49_RS28010;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=LDO49_RS28010;old_locus_tag=BCEP4_540119 NZ_CAJZAV010000262.1 Protein Homology CDS 98607 99374 . + 0 ID=cds-WP_021157058.1;Parent=gene-LDO49_RS28010;Dbxref=GenBank:WP_021157058.1;Name=WP_021157058.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752095.1;locus_tag=LDO49_RS28010;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_021157058.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 99485 100315 . - . ID=gene-LDO49_RS28015;Name=LDO49_RS28015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28015;old_locus_tag=BCEP4_540120 NZ_CAJZAV010000262.1 Protein Homology CDS 99485 100315 . - 0 ID=cds-WP_021157057.1;Parent=gene-LDO49_RS28015;Dbxref=GenBank:WP_021157057.1;Name=WP_021157057.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488560.1;locus_tag=LDO49_RS28015;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_021157057.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 100397 100978 . - . ID=gene-LDO49_RS28020;Name=LDO49_RS28020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28020;old_locus_tag=BCEP4_540122 NZ_CAJZAV010000262.1 Protein Homology CDS 100397 100978 . - 0 ID=cds-WP_027788156.1;Parent=gene-LDO49_RS28020;Dbxref=GenBank:WP_027788156.1;Name=WP_027788156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186118.1;locus_tag=LDO49_RS28020;product=DUF1439 domain-containing protein;protein_id=WP_027788156.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 100975 101292 . - . ID=gene-LDO49_RS28025;Name=LDO49_RS28025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28025;old_locus_tag=BCEP4_540123 NZ_CAJZAV010000262.1 Protein Homology CDS 100975 101292 . - 0 ID=cds-WP_034195806.1;Parent=gene-LDO49_RS28025;Dbxref=GenBank:WP_034195806.1;Name=WP_034195806.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544782.1;locus_tag=LDO49_RS28025;product=YkgJ family cysteine cluster protein;protein_id=WP_034195806.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 101465 102856 . + . ID=gene-LDO49_RS28030;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=LDO49_RS28030;old_locus_tag=BCEP4_540121 NZ_CAJZAV010000262.1 Protein Homology CDS 101465 102856 . + 0 ID=cds-WP_060073747.1;Parent=gene-LDO49_RS28030;Dbxref=GenBank:WP_060073747.1;Name=WP_060073747.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363257.1;locus_tag=LDO49_RS28030;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_060073747.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 102927 103184 . + . ID=gene-LDO49_RS28035;Name=LDO49_RS28035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28035;old_locus_tag=BCEP4_540124 NZ_CAJZAV010000262.1 Protein Homology CDS 102927 103184 . + 0 ID=cds-WP_059485280.1;Parent=gene-LDO49_RS28035;Dbxref=GenBank:WP_059485280.1;Name=WP_059485280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752100.1;locus_tag=LDO49_RS28035;product=hypothetical protein;protein_id=WP_059485280.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 103289 103945 . + . ID=gene-LDO49_RS28040;Name=LDO49_RS28040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28040;old_locus_tag=BCEP4_540125 NZ_CAJZAV010000262.1 Protein Homology CDS 103289 103945 . + 0 ID=cds-WP_021157052.1;Parent=gene-LDO49_RS28040;Dbxref=GenBank:WP_021157052.1;Name=WP_021157052.1;Ontology_term=GO:0030091,GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein repair|0030091||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332930.1;locus_tag=LDO49_RS28040;product=protein-L-isoaspartate O-methyltransferase family protein;protein_id=WP_021157052.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 103960 104283 . + . ID=gene-LDO49_RS28045;Name=LDO49_RS28045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28045;old_locus_tag=BCEP4_540126 NZ_CAJZAV010000262.1 Protein Homology CDS 103960 104283 . + 0 ID=cds-WP_011351193.1;Parent=gene-LDO49_RS28045;Dbxref=GenBank:WP_011351193.1;Name=WP_011351193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091617.1;locus_tag=LDO49_RS28045;product=rhodanese-like domain-containing protein;protein_id=WP_011351193.1;transl_table=11 NZ_CAJZAV010000262.1 RefSeq gene 104715 106022 . + . ID=gene-LDO49_RS28050;Name=urtA;gbkey=Gene;gene=urtA;gene_biotype=protein_coding;locus_tag=LDO49_RS28050;old_locus_tag=BCEP4_540127 NZ_CAJZAV010000262.1 Protein Homology CDS 104715 106022 . + 0 ID=cds-WP_021157051.1;Parent=gene-LDO49_RS28050;Dbxref=GenBank:WP_021157051.1;Name=WP_021157051.1;Ontology_term=GO:0015840,GO:0033219,GO:0033221,GO:0030288,GO:0055052;gbkey=CDS;gene=urtA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=urea binding|0033219||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476693.1;locus_tag=LDO49_RS28050;product=urea ABC transporter substrate-binding protein;protein_id=WP_021157051.1;transl_table=11 ##sequence-region NZ_CAJZAV010000263.1 1 47975 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000263.1 RefSeq region 1 47975 . + . ID=NZ_CAJZAV010000263.1:1..47975;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_55 NZ_CAJZAV010000263.1 RefSeq gene 1 1118 . - . ID=gene-LDO49_RS28055;Name=LDO49_RS28055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28055;partial=true;start_range=.,1 NZ_CAJZAV010000263.1 Protein Homology CDS 1 1118 . - 0 ID=cds-WP_224052583.1;Parent=gene-LDO49_RS28055;Dbxref=GenBank:WP_224052583.1;Name=WP_224052583.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020202195.1;locus_tag=LDO49_RS28055;partial=true;product=type VI secretion system Vgr family protein;protein_id=WP_224052583.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq pseudogene 1390 1950 . - . ID=gene-LDO49_RS28060;Name=LDO49_RS28060;end_range=1950,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS28060;old_locus_tag=BCEP4_550002;partial=true;pseudo=true NZ_CAJZAV010000263.1 Protein Homology CDS 1390 1950 . - 0 ID=cds-LDO49_RS28060;Parent=gene-LDO49_RS28060;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=1950,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658022.1;locus_tag=LDO49_RS28060;partial=true;product=sodium:solute symporter family transporter;pseudo=true;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 1960 2520 . - . ID=gene-LDO49_RS28065;Name=LDO49_RS28065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28065;old_locus_tag=BCEP4_550003 NZ_CAJZAV010000263.1 Protein Homology CDS 1960 2520 . - 0 ID=cds-WP_059622609.1;Parent=gene-LDO49_RS28065;Dbxref=GenBank:WP_059622609.1;Name=WP_059622609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766105.1;locus_tag=LDO49_RS28065;product=putative glycolipid-binding domain-containing protein;protein_id=WP_059622609.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 2777 3223 . + . ID=gene-LDO49_RS28070;Name=LDO49_RS28070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28070;old_locus_tag=BCEP4_550004 NZ_CAJZAV010000263.1 Protein Homology CDS 2777 3223 . + 0 ID=cds-WP_224052584.1;Parent=gene-LDO49_RS28070;Dbxref=GenBank:WP_224052584.1;Name=WP_224052584.1;Ontology_term=GO:0071918,GO:0015204,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=urea transmembrane transporter activity|0015204||IEA;go_process=urea transmembrane transport|0071918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403238.1;locus_tag=LDO49_RS28070;product=urea transporter;protein_id=WP_224052584.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 3198 3974 . + . ID=gene-LDO49_RS28075;Name=LDO49_RS28075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28075;old_locus_tag=BCEP4_550005 NZ_CAJZAV010000263.1 Protein Homology CDS 3198 3974 . + 0 ID=cds-WP_224052585.1;Parent=gene-LDO49_RS28075;Dbxref=GenBank:WP_224052585.1;Name=WP_224052585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766106.1;locus_tag=LDO49_RS28075;product=class II aldolase/adducin family protein;protein_id=WP_224052585.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 4034 4222 . + . ID=gene-LDO49_RS28080;Name=LDO49_RS28080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28080;old_locus_tag=BCEP4_550006 NZ_CAJZAV010000263.1 Protein Homology CDS 4034 4222 . + 0 ID=cds-WP_021161485.1;Parent=gene-LDO49_RS28080;Dbxref=GenBank:WP_021161485.1;Name=WP_021161485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354745.1;locus_tag=LDO49_RS28080;product=4-oxalocrotonate tautomerase;protein_id=WP_021161485.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 4418 9039 . + . ID=gene-LDO49_RS28085;Name=LDO49_RS28085;end_range=9039,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28085;old_locus_tag=BCEP4_550007;partial=true NZ_CAJZAV010000263.1 Protein Homology CDS 4418 9039 . + 0 ID=cds-WP_443798013.1;Parent=gene-LDO49_RS28085;Dbxref=GenBank:WP_443798013.1;Name=WP_443798013.1;Ontology_term=GO:0004352;end_range=9039,.;gbkey=CDS;go_function=glutamate dehydrogenase (NAD+) activity|0004352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487209.1;locus_tag=LDO49_RS28085;partial=true;product=NAD-glutamate dehydrogenase;protein_id=WP_443798013.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq pseudogene 9050 9280 . + . ID=gene-LDO49_RS38345;Name=LDO49_RS38345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38345;partial=true;pseudo=true;start_range=.,9050 NZ_CAJZAV010000263.1 Protein Homology CDS 9050 9280 . + 0 ID=cds-LDO49_RS38345;Parent=gene-LDO49_RS38345;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487209.1;locus_tag=LDO49_RS38345;partial=true;product=NAD-glutamate dehydrogenase;pseudo=true;start_range=.,9050;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 9374 10234 . - . ID=gene-LDO49_RS28090;Name=LDO49_RS28090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28090;old_locus_tag=BCEP4_550009 NZ_CAJZAV010000263.1 Protein Homology CDS 9374 10234 . - 0 ID=cds-WP_021161488.1;Parent=gene-LDO49_RS28090;Dbxref=GenBank:WP_021161488.1;Name=WP_021161488.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478747.1;locus_tag=LDO49_RS28090;product=class I SAM-dependent methyltransferase;protein_id=WP_021161488.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 10242 10592 . - . ID=gene-LDO49_RS28095;Name=LDO49_RS28095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28095;old_locus_tag=BCEP4_550010 NZ_CAJZAV010000263.1 Protein Homology CDS 10242 10592 . - 0 ID=cds-WP_104766777.1;Parent=gene-LDO49_RS28095;Dbxref=GenBank:WP_104766777.1;Name=WP_104766777.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339782.1;locus_tag=LDO49_RS28095;product=VOC family protein;protein_id=WP_104766777.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 10594 10770 . - . ID=gene-LDO49_RS28100;Name=LDO49_RS28100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28100;old_locus_tag=BCEP4_550011 NZ_CAJZAV010000263.1 Protein Homology CDS 10594 10770 . - 0 ID=cds-WP_048022620.1;Parent=gene-LDO49_RS28100;Dbxref=GenBank:WP_048022620.1;Name=WP_048022620.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396803.1;locus_tag=LDO49_RS28100;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_048022620.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 10858 11688 . - . ID=gene-LDO49_RS28105;Name=LDO49_RS28105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28105;old_locus_tag=BCEP4_550012 NZ_CAJZAV010000263.1 Protein Homology CDS 10858 11688 . - 0 ID=cds-WP_059813766.1;Parent=gene-LDO49_RS28105;Dbxref=GenBank:WP_059813766.1;Name=WP_059813766.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547443.1;locus_tag=LDO49_RS28105;product=arylamine N-acetyltransferase family protein;protein_id=WP_059813766.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 11810 12496 . - . ID=gene-LDO49_RS28110;Name=LDO49_RS28110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28110;old_locus_tag=BCEP4_550013 NZ_CAJZAV010000263.1 Protein Homology CDS 11810 12496 . - 0 ID=cds-WP_027789362.1;Parent=gene-LDO49_RS28110;Dbxref=GenBank:WP_027789362.1;Name=WP_027789362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216821.1;locus_tag=LDO49_RS28110;product=hypothetical protein;protein_id=WP_027789362.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 12516 12803 . + . ID=gene-LDO49_RS28115;Name=LDO49_RS28115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28115 NZ_CAJZAV010000263.1 GeneMarkS-2+ CDS 12516 12803 . + 0 ID=cds-WP_146774283.1;Parent=gene-LDO49_RS28115;Dbxref=GenBank:WP_146774283.1;Name=WP_146774283.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS28115;product=hypothetical protein;protein_id=WP_146774283.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 13202 14686 . - . ID=gene-LDO49_RS28120;Name=LDO49_RS28120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28120;old_locus_tag=BCEP4_550014 NZ_CAJZAV010000263.1 Protein Homology CDS 13202 14686 . - 0 ID=cds-WP_224052587.1;Parent=gene-LDO49_RS28120;Dbxref=GenBank:WP_224052587.1;Name=WP_224052587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882484.1;locus_tag=LDO49_RS28120;product=amidase;protein_id=WP_224052587.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 15055 15489 . + . ID=gene-LDO49_RS28125;Name=LDO49_RS28125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28125;old_locus_tag=BCEP4_550016 NZ_CAJZAV010000263.1 Protein Homology CDS 15055 15489 . + 0 ID=cds-WP_021161496.1;Parent=gene-LDO49_RS28125;Dbxref=GenBank:WP_021161496.1;Name=WP_021161496.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758080.1;locus_tag=LDO49_RS28125;product=universal stress protein;protein_id=WP_021161496.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 16129 16377 . + . ID=gene-LDO49_RS28130;Name=LDO49_RS28130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28130;old_locus_tag=BCEP4_550017 NZ_CAJZAV010000263.1 Protein Homology CDS 16129 16377 . + 0 ID=cds-WP_021161497.1;Parent=gene-LDO49_RS28130;Dbxref=GenBank:WP_021161497.1;Name=WP_021161497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487226.1;locus_tag=LDO49_RS28130;product=hypothetical protein;protein_id=WP_021161497.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 16681 17154 . + . ID=gene-LDO49_RS28135;Name=LDO49_RS28135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28135;old_locus_tag=BCEP4_550019 NZ_CAJZAV010000263.1 Protein Homology CDS 16681 17154 . + 0 ID=cds-WP_048022623.1;Parent=gene-LDO49_RS28135;Dbxref=GenBank:WP_048022623.1;Name=WP_048022623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013590245.1;locus_tag=LDO49_RS28135;product=nuclear transport factor 2 family protein;protein_id=WP_048022623.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 17166 17921 . - . ID=gene-LDO49_RS28140;Name=LDO49_RS28140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28140;old_locus_tag=BCEP4_550020 NZ_CAJZAV010000263.1 Protein Homology CDS 17166 17921 . - 0 ID=cds-WP_176130829.1;Parent=gene-LDO49_RS28140;Dbxref=GenBank:WP_176130829.1;Name=WP_176130829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547437.1;locus_tag=LDO49_RS28140;product=BPL-N domain-containing protein;protein_id=WP_176130829.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 18650 21235 . + . ID=gene-LDO49_RS28145;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=LDO49_RS28145;old_locus_tag=BCEP4_550022 NZ_CAJZAV010000263.1 Protein Homology CDS 18650 21235 . + 0 ID=cds-WP_048022625.1;Parent=gene-LDO49_RS28145;Dbxref=GenBank:WP_048022625.1;Name=WP_048022625.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004633909.1;locus_tag=LDO49_RS28145;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_048022625.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 21361 21774 . - . ID=gene-LDO49_RS28150;Name=LDO49_RS28150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28150;old_locus_tag=BCEP4_550023 NZ_CAJZAV010000263.1 Protein Homology CDS 21361 21774 . - 0 ID=cds-WP_059497028.1;Parent=gene-LDO49_RS28150;Dbxref=GenBank:WP_059497028.1;Name=WP_059497028.1;Ontology_term=GO:0003680;gbkey=CDS;go_function=minor groove of adenine-thymine-rich DNA binding|0003680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496937.1;locus_tag=LDO49_RS28150;product=PPC domain-containing DNA-binding protein;protein_id=WP_059497028.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 22089 22991 . + . ID=gene-LDO49_RS28155;Name=LDO49_RS28155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28155;old_locus_tag=BCEP4_550024 NZ_CAJZAV010000263.1 Protein Homology CDS 22089 22991 . + 0 ID=cds-WP_224052588.1;Parent=gene-LDO49_RS28155;Dbxref=GenBank:WP_224052588.1;Name=WP_224052588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496936.1;locus_tag=LDO49_RS28155;product=hypothetical protein;protein_id=WP_224052588.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 23161 24087 . + . ID=gene-LDO49_RS28160;Name=LDO49_RS28160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28160;old_locus_tag=BCEP4_550025 NZ_CAJZAV010000263.1 Protein Homology CDS 23161 24087 . + 0 ID=cds-WP_224052589.1;Parent=gene-LDO49_RS28160;Dbxref=GenBank:WP_224052589.1;Name=WP_224052589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496935.1;locus_tag=LDO49_RS28160;product=ADP-ribosylglycohydrolase family protein;protein_id=WP_224052589.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 24207 24755 . - . ID=gene-LDO49_RS28165;Name=LDO49_RS28165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28165;old_locus_tag=BCEP4_550026 NZ_CAJZAV010000263.1 Protein Homology CDS 24207 24755 . - 0 ID=cds-WP_048022628.1;Parent=gene-LDO49_RS28165;Dbxref=GenBank:WP_048022628.1;Name=WP_048022628.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496934.1;locus_tag=LDO49_RS28165;product=GNAT family N-acetyltransferase;protein_id=WP_048022628.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 24894 26294 . - . ID=gene-LDO49_RS28170;Name=LDO49_RS28170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28170;old_locus_tag=BCEP4_550027 NZ_CAJZAV010000263.1 Protein Homology CDS 24894 26294 . - 0 ID=cds-WP_059497034.1;Parent=gene-LDO49_RS28170;Dbxref=GenBank:WP_059497034.1;Name=WP_059497034.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329043.1;locus_tag=LDO49_RS28170;product=MFS transporter;protein_id=WP_059497034.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 26325 27569 . - . ID=gene-LDO49_RS28175;Name=LDO49_RS28175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28175;old_locus_tag=BCEP4_550028 NZ_CAJZAV010000263.1 Protein Homology CDS 26325 27569 . - 0 ID=cds-WP_224052590.1;Parent=gene-LDO49_RS28175;Dbxref=GenBank:WP_224052590.1;Name=WP_224052590.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354722.1;locus_tag=LDO49_RS28175;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_224052590.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 27566 28528 . - . ID=gene-LDO49_RS28180;Name=LDO49_RS28180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28180;old_locus_tag=BCEP4_550029 NZ_CAJZAV010000263.1 Protein Homology CDS 27566 28528 . - 0 ID=cds-WP_059497038.1;Parent=gene-LDO49_RS28180;Dbxref=GenBank:WP_059497038.1;Name=WP_059497038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898935.1;locus_tag=LDO49_RS28180;product=VOC family protein;protein_id=WP_059497038.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 28547 30037 . - . ID=gene-LDO49_RS28185;Name=LDO49_RS28185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28185;old_locus_tag=BCEP4_550030 NZ_CAJZAV010000263.1 Protein Homology CDS 28547 30037 . - 0 ID=cds-WP_059588511.1;Parent=gene-LDO49_RS28185;Dbxref=GenBank:WP_059588511.1;Name=WP_059588511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255256.1;locus_tag=LDO49_RS28185;product=aldehyde dehydrogenase;protein_id=WP_059588511.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 30110 30937 . - . ID=gene-LDO49_RS28190;Name=LDO49_RS28190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28190;old_locus_tag=BCEP4_550031 NZ_CAJZAV010000263.1 Protein Homology CDS 30110 30937 . - 0 ID=cds-WP_060074748.1;Parent=gene-LDO49_RS28190;Dbxref=GenBank:WP_060074748.1;Name=WP_060074748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478730.1;locus_tag=LDO49_RS28190;product=aspartate dehydrogenase;protein_id=WP_060074748.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 30930 32597 . - . ID=gene-LDO49_RS28195;Name=LDO49_RS28195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28195;old_locus_tag=BCEP4_550032 NZ_CAJZAV010000263.1 Protein Homology CDS 30930 32597 . - 0 ID=cds-WP_021161509.1;Parent=gene-LDO49_RS28195;Dbxref=GenBank:WP_021161509.1;Name=WP_021161509.1;Ontology_term=GO:0030976;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487228.1;locus_tag=LDO49_RS28195;product=thiamine pyrophosphate-binding protein;protein_id=WP_021161509.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 32590 33387 . - . ID=gene-LDO49_RS28200;Name=LDO49_RS28200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28200;old_locus_tag=BCEP4_550033 NZ_CAJZAV010000263.1 Protein Homology CDS 32590 33387 . - 0 ID=cds-WP_059484804.1;Parent=gene-LDO49_RS28200;Dbxref=GenBank:WP_059484804.1;Name=WP_059484804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602774.1;locus_tag=LDO49_RS28200;product=SDR family oxidoreductase;protein_id=WP_059484804.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 33384 34241 . - . ID=gene-LDO49_RS28205;Name=LDO49_RS28205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28205;old_locus_tag=BCEP4_550034 NZ_CAJZAV010000263.1 Protein Homology CDS 33384 34241 . - 0 ID=cds-WP_059497041.1;Parent=gene-LDO49_RS28205;Dbxref=GenBank:WP_059497041.1;Name=WP_059497041.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496928.1;locus_tag=LDO49_RS28205;product=IclR family transcriptional regulator;protein_id=WP_059497041.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 34238 35134 . - . ID=gene-LDO49_RS28210;Name=LDO49_RS28210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28210;old_locus_tag=BCEP4_550035 NZ_CAJZAV010000263.1 Protein Homology CDS 34238 35134 . - 0 ID=cds-WP_060074749.1;Parent=gene-LDO49_RS28210;Dbxref=GenBank:WP_060074749.1;Name=WP_060074749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413788.1;locus_tag=LDO49_RS28210;product=alpha/beta fold hydrolase;protein_id=WP_060074749.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 35153 35680 . - . ID=gene-LDO49_RS28215;Name=LDO49_RS28215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28215;old_locus_tag=BCEP4_550036 NZ_CAJZAV010000263.1 Protein Homology CDS 35153 35680 . - 0 ID=cds-WP_021161513.1;Parent=gene-LDO49_RS28215;Dbxref=GenBank:WP_021161513.1;Name=WP_021161513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366322.1;locus_tag=LDO49_RS28215;product=cupin domain-containing protein;protein_id=WP_021161513.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 35714 36484 . - . ID=gene-LDO49_RS28220;Name=LDO49_RS28220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28220;old_locus_tag=BCEP4_550037 NZ_CAJZAV010000263.1 Protein Homology CDS 35714 36484 . - 0 ID=cds-WP_060074750.1;Parent=gene-LDO49_RS28220;Dbxref=GenBank:WP_060074750.1;Name=WP_060074750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354713.1;locus_tag=LDO49_RS28220;product=SDR family oxidoreductase;protein_id=WP_060074750.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 36477 37559 . - . ID=gene-LDO49_RS28225;Name=LDO49_RS28225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28225;old_locus_tag=BCEP4_550038 NZ_CAJZAV010000263.1 Protein Homology CDS 36477 37559 . - 0 ID=cds-WP_060074751.1;Parent=gene-LDO49_RS28225;Dbxref=GenBank:WP_060074751.1;Name=WP_060074751.1;Ontology_term=GO:0016491,GO:0051537;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014972623.1;locus_tag=LDO49_RS28225;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_060074751.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 37628 37939 . - . ID=gene-LDO49_RS28230;Name=LDO49_RS28230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28230;old_locus_tag=BCEP4_550039 NZ_CAJZAV010000263.1 Protein Homology CDS 37628 37939 . - 0 ID=cds-WP_059484801.1;Parent=gene-LDO49_RS28230;Dbxref=GenBank:WP_059484801.1;Name=WP_059484801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184841.1;locus_tag=LDO49_RS28230;product=recombinase-like helix-turn-helix domain-containing protein;protein_id=WP_059484801.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 37943 38260 . - . ID=gene-LDO49_RS28235;Name=LDO49_RS28235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28235;old_locus_tag=BCEP4_550040 NZ_CAJZAV010000263.1 Protein Homology CDS 37943 38260 . - 0 ID=cds-WP_021161517.1;Parent=gene-LDO49_RS28235;Dbxref=GenBank:WP_021161517.1;Name=WP_021161517.1;Ontology_term=GO:0009056,GO:0046872,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396774.1;locus_tag=LDO49_RS28235;product=non-heme iron oxygenase ferredoxin subunit;protein_id=WP_021161517.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 38706 39785 . + . ID=gene-LDO49_RS28240;Name=LDO49_RS28240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28240;old_locus_tag=BCEP4_550041 NZ_CAJZAV010000263.1 Protein Homology CDS 38706 39785 . + 0 ID=cds-WP_042976372.1;Parent=gene-LDO49_RS28240;Dbxref=GenBank:WP_042976372.1;Name=WP_042976372.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329028.1;locus_tag=LDO49_RS28240;product=porin;protein_id=WP_042976372.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 39889 40782 . - . ID=gene-LDO49_RS28245;Name=LDO49_RS28245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28245;old_locus_tag=BCEP4_550042 NZ_CAJZAV010000263.1 Protein Homology CDS 39889 40782 . - 0 ID=cds-WP_060074752.1;Parent=gene-LDO49_RS28245;Dbxref=GenBank:WP_060074752.1;Name=WP_060074752.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339771.1;locus_tag=LDO49_RS28245;product=IclR family transcriptional regulator;protein_id=WP_060074752.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 41051 41530 . - . ID=gene-LDO49_RS28250;Name=tecA;gbkey=Gene;gene=tecA;gene_biotype=protein_coding;locus_tag=LDO49_RS28250;old_locus_tag=BCEP4_550043 NZ_CAJZAV010000263.1 Protein Homology CDS 41051 41530 . - 0 ID=cds-WP_059652714.1;Parent=gene-LDO49_RS28250;Dbxref=GenBank:WP_059652714.1;Name=WP_059652714.1;gbkey=CDS;gene=tecA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496925.1;locus_tag=LDO49_RS28250;product=type 6 secretion system effector deamidase TecA;protein_id=WP_059652714.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 41902 42108 . - . ID=gene-LDO49_RS28255;Name=LDO49_RS28255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28255;old_locus_tag=BCEP4_550044 NZ_CAJZAV010000263.1 Protein Homology CDS 41902 42108 . - 0 ID=cds-WP_021161906.1;Parent=gene-LDO49_RS28255;Dbxref=GenBank:WP_021161906.1;Name=WP_021161906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766132.1;locus_tag=LDO49_RS28255;product=hypothetical protein;protein_id=WP_021161906.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 42449 43054 . - . ID=gene-LDO49_RS28260;Name=LDO49_RS28260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28260;old_locus_tag=BCEP4_550046 NZ_CAJZAV010000263.1 Protein Homology CDS 42449 43054 . - 0 ID=cds-WP_224052591.1;Parent=gene-LDO49_RS28260;Dbxref=GenBank:WP_224052591.1;Name=WP_224052591.1;Ontology_term=GO:0003676,GO:0008198,GO:0016706;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ferrous iron binding|0008198||IEA,2-oxoglutarate-dependent dioxygenase activity|0016706||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751288.1;locus_tag=LDO49_RS28260;product=alpha-ketoglutarate-dependent dioxygenase AlkB family protein;protein_id=WP_224052591.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 43216 44364 . - . ID=gene-LDO49_RS28265;Name=LDO49_RS28265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28265;old_locus_tag=BCEP4_550047 NZ_CAJZAV010000263.1 Protein Homology CDS 43216 44364 . - 0 ID=cds-WP_060074753.1;Parent=gene-LDO49_RS28265;Dbxref=GenBank:WP_060074753.1;Name=WP_060074753.1;Ontology_term=GO:0016311,GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547415.1;locus_tag=LDO49_RS28265;product=metallophosphoesterase;protein_id=WP_060074753.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 44942 45235 . + . ID=gene-LDO49_RS28270;Name=LDO49_RS28270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28270;old_locus_tag=BCEP4_550049 NZ_CAJZAV010000263.1 Protein Homology CDS 44942 45235 . + 0 ID=cds-WP_011354664.1;Parent=gene-LDO49_RS28270;Dbxref=GenBank:WP_011354664.1;Name=WP_011354664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366330.1;locus_tag=LDO49_RS28270;product=hypothetical protein;protein_id=WP_011354664.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 45232 46281 . + . ID=gene-LDO49_RS28275;Name=mdtN;gbkey=Gene;gene=mdtN;gene_biotype=protein_coding;locus_tag=LDO49_RS28275;old_locus_tag=BCEP4_550048 NZ_CAJZAV010000263.1 Protein Homology CDS 45232 46281 . + 0 ID=cds-WP_060074754.1;Parent=gene-LDO49_RS28275;Dbxref=GenBank:WP_060074754.1;Name=WP_060074754.1;gbkey=CDS;gene=mdtN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751291.1;locus_tag=LDO49_RS28275;product=multidrug transporter subunit MdtN;protein_id=WP_060074754.1;transl_table=11 NZ_CAJZAV010000263.1 RefSeq gene 46262 47975 . + . ID=gene-LDO49_RS28280;Name=LDO49_RS28280;end_range=47975,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28280;partial=true NZ_CAJZAV010000263.1 Protein Homology CDS 46262 47975 . + 0 ID=cds-WP_224052592.1;Parent=gene-LDO49_RS28280;Dbxref=GenBank:WP_224052592.1;Name=WP_224052592.1;end_range=47975,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547411.1;locus_tag=LDO49_RS28280;partial=true;product=FUSC family protein;protein_id=WP_224052592.1;transl_table=11 ##sequence-region NZ_CAJZAV010000264.1 1 62511 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000264.1 RefSeq region 1 62511 . + . ID=NZ_CAJZAV010000264.1:1..62511;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_56 NZ_CAJZAV010000264.1 RefSeq gene 1 945 . - . ID=gene-LDO49_RS28285;Name=LDO49_RS28285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28285;partial=true;start_range=.,1 NZ_CAJZAV010000264.1 Protein Homology CDS 1 945 . - 0 ID=cds-WP_224052593.1;Parent=gene-LDO49_RS28285;Dbxref=GenBank:WP_224052593.1;Name=WP_224052593.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494919.1;locus_tag=LDO49_RS28285;partial=true;product=LysR family transcriptional regulator;protein_id=WP_224052593.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 1051 2409 . + . ID=gene-LDO49_RS28290;Name=LDO49_RS28290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28290;old_locus_tag=BCEP4_560003 NZ_CAJZAV010000264.1 Protein Homology CDS 1051 2409 . + 0 ID=cds-WP_059484972.1;Parent=gene-LDO49_RS28290;Dbxref=GenBank:WP_059484972.1;Name=WP_059484972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329565.1;locus_tag=LDO49_RS28290;product=aspartate aminotransferase family protein;protein_id=WP_059484972.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 2459 3976 . + . ID=gene-LDO49_RS28295;Name=LDO49_RS28295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28295;old_locus_tag=BCEP4_560004 NZ_CAJZAV010000264.1 Protein Homology CDS 2459 3976 . + 0 ID=cds-WP_021159212.1;Parent=gene-LDO49_RS28295;Dbxref=GenBank:WP_021159212.1;Name=WP_021159212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366001.1;locus_tag=LDO49_RS28295;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_021159212.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 4122 4496 . - . ID=gene-LDO49_RS28300;Name=LDO49_RS28300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28300;old_locus_tag=BCEP4_560005 NZ_CAJZAV010000264.1 Protein Homology CDS 4122 4496 . - 0 ID=cds-WP_021159211.1;Parent=gene-LDO49_RS28300;Dbxref=GenBank:WP_021159211.1;Name=WP_021159211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479101.1;locus_tag=LDO49_RS28300;product=COG4315 family predicted lipoprotein;protein_id=WP_021159211.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 4828 5772 . - . ID=gene-LDO49_RS28305;Name=LDO49_RS28305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28305;old_locus_tag=BCEP4_560006 NZ_CAJZAV010000264.1 Protein Homology CDS 4828 5772 . - 0 ID=cds-WP_060071759.1;Parent=gene-LDO49_RS28305;Dbxref=GenBank:WP_060071759.1;Name=WP_060071759.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547769.1;locus_tag=LDO49_RS28305;product=DMT family transporter;protein_id=WP_060071759.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 5899 6831 . - . ID=gene-LDO49_RS28310;Name=LDO49_RS28310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28310;old_locus_tag=BCEP4_560007 NZ_CAJZAV010000264.1 Protein Homology CDS 5899 6831 . - 0 ID=cds-WP_059650768.1;Parent=gene-LDO49_RS28310;Dbxref=GenBank:WP_059650768.1;Name=WP_059650768.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899464.1;locus_tag=LDO49_RS28310;product=AEC family transporter;protein_id=WP_059650768.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 7023 7907 . - . ID=gene-LDO49_RS28315;Name=LDO49_RS28315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28315;old_locus_tag=BCEP4_560008 NZ_CAJZAV010000264.1 Protein Homology CDS 7023 7907 . - 0 ID=cds-WP_059484970.1;Parent=gene-LDO49_RS28315;Dbxref=GenBank:WP_059484970.1;Name=WP_059484970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329558.1;locus_tag=LDO49_RS28315;product=LysR substrate-binding domain-containing protein;protein_id=WP_059484970.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 8222 9466 . + . ID=gene-LDO49_RS28320;Name=LDO49_RS28320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28320;old_locus_tag=BCEP4_560010 NZ_CAJZAV010000264.1 Protein Homology CDS 8222 9466 . + 0 ID=cds-WP_059552299.1;Parent=gene-LDO49_RS28320;Dbxref=GenBank:WP_059552299.1;Name=WP_059552299.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355294.1;locus_tag=LDO49_RS28320;product=serine hydrolase domain-containing protein;protein_id=WP_059552299.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 9484 10314 . - . ID=gene-LDO49_RS28325;Name=LDO49_RS28325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28325;old_locus_tag=BCEP4_560011 NZ_CAJZAV010000264.1 Protein Homology CDS 9484 10314 . - 0 ID=cds-WP_060071761.1;Parent=gene-LDO49_RS28325;Dbxref=GenBank:WP_060071761.1;Name=WP_060071761.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: protein motif:HMM:NF019322.6;locus_tag=LDO49_RS28325;product=GntR family transcriptional regulator;protein_id=WP_060071761.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 10447 11382 . - . ID=gene-LDO49_RS28330;Name=LDO49_RS28330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28330;old_locus_tag=BCEP4_560012 NZ_CAJZAV010000264.1 Protein Homology CDS 10447 11382 . - 0 ID=cds-WP_060071763.1;Parent=gene-LDO49_RS28330;Dbxref=GenBank:WP_060071763.1;Name=WP_060071763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899461.1;locus_tag=LDO49_RS28330;product=helix-turn-helix domain-containing protein;protein_id=WP_060071763.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 11470 12909 . + . ID=gene-LDO49_RS28335;Name=LDO49_RS28335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28335;old_locus_tag=BCEP4_560013 NZ_CAJZAV010000264.1 Protein Homology CDS 11470 12909 . + 0 ID=cds-WP_060071947.1;Parent=gene-LDO49_RS28335;Dbxref=GenBank:WP_060071947.1;Name=WP_060071947.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008650973.1;locus_tag=LDO49_RS28335;product=cytochrome P450;protein_id=WP_060071947.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 13098 13403 . + . ID=gene-LDO49_RS28340;Name=LDO49_RS28340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28340;old_locus_tag=BCEP4_560014 NZ_CAJZAV010000264.1 Protein Homology CDS 13098 13403 . + 0 ID=cds-WP_059492429.1;Parent=gene-LDO49_RS28340;Dbxref=GenBank:WP_059492429.1;Name=WP_059492429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003265660.1;locus_tag=LDO49_RS28340;product=hypothetical protein;protein_id=WP_059492429.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 13417 13605 . + . ID=gene-LDO49_RS28345;Name=LDO49_RS28345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28345 NZ_CAJZAV010000264.1 GeneMarkS-2+ CDS 13417 13605 . + 0 ID=cds-WP_059492284.1;Parent=gene-LDO49_RS28345;Dbxref=GenBank:WP_059492284.1;Name=WP_059492284.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS28345;product=hypothetical protein;protein_id=WP_059492284.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 13709 14509 . - . ID=gene-LDO49_RS28350;Name=LDO49_RS28350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28350;old_locus_tag=BCEP4_560015 NZ_CAJZAV010000264.1 Protein Homology CDS 13709 14509 . - 0 ID=cds-WP_048023079.1;Parent=gene-LDO49_RS28350;Dbxref=GenBank:WP_048023079.1;Name=WP_048023079.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482848.1;locus_tag=LDO49_RS28350;product=helix-turn-helix transcriptional regulator;protein_id=WP_048023079.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 14635 16041 . + . ID=gene-LDO49_RS28355;Name=LDO49_RS28355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28355;old_locus_tag=BCEP4_560016 NZ_CAJZAV010000264.1 Protein Homology CDS 14635 16041 . + 0 ID=cds-WP_059552295.1;Parent=gene-LDO49_RS28355;Dbxref=GenBank:WP_059552295.1;Name=WP_059552295.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482833.1;locus_tag=LDO49_RS28355;product=APC family permease;protein_id=WP_059552295.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 16106 17215 . + . ID=gene-LDO49_RS28360;Name=LDO49_RS28360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28360;old_locus_tag=BCEP4_560017 NZ_CAJZAV010000264.1 Protein Homology CDS 16106 17215 . + 0 ID=cds-WP_224052594.1;Parent=gene-LDO49_RS28360;Dbxref=GenBank:WP_224052594.1;Name=WP_224052594.1;Ontology_term=GO:0006508,GO:0004177;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217027.1;locus_tag=LDO49_RS28360;product=DmpA family aminopeptidase;protein_id=WP_224052594.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 17360 17572 . - . ID=gene-LDO49_RS28365;Name=LDO49_RS28365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28365;old_locus_tag=BCEP4_560018 NZ_CAJZAV010000264.1 Protein Homology CDS 17360 17572 . - 0 ID=cds-WP_048023078.1;Parent=gene-LDO49_RS28365;Dbxref=GenBank:WP_048023078.1;Name=WP_048023078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754376.1;locus_tag=LDO49_RS28365;product=hypothetical protein;protein_id=WP_048023078.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 17737 19920 . - . ID=gene-LDO49_RS28370;Name=LDO49_RS28370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28370;old_locus_tag=BCEP4_560019 NZ_CAJZAV010000264.1 Protein Homology CDS 17737 19920 . - 0 ID=cds-WP_224052595.1;Parent=gene-LDO49_RS28370;Dbxref=GenBank:WP_224052595.1;Name=WP_224052595.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338214.1;locus_tag=LDO49_RS28370;product=FUSC family protein;protein_id=WP_224052595.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 20120 21067 . + . ID=gene-LDO49_RS28375;Name=LDO49_RS28375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28375;old_locus_tag=BCEP4_560020 NZ_CAJZAV010000264.1 Protein Homology CDS 20120 21067 . + 0 ID=cds-WP_027791525.1;Parent=gene-LDO49_RS28375;Dbxref=GenBank:WP_027791525.1;Name=WP_027791525.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658752.1;locus_tag=LDO49_RS28375;product=LysR family transcriptional regulator;protein_id=WP_027791525.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 21218 21520 . - . ID=gene-LDO49_RS28380;Name=LDO49_RS28380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28380;old_locus_tag=BCEP4_560021 NZ_CAJZAV010000264.1 Protein Homology CDS 21218 21520 . - 0 ID=cds-WP_021159193.1;Parent=gene-LDO49_RS28380;Dbxref=GenBank:WP_021159193.1;Name=WP_021159193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755817.1;locus_tag=LDO49_RS28380;product=DUF4148 domain-containing protein;protein_id=WP_021159193.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 21735 22877 . - . ID=gene-LDO49_RS28385;Name=LDO49_RS28385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28385;old_locus_tag=BCEP4_560022 NZ_CAJZAV010000264.1 Protein Homology CDS 21735 22877 . - 0 ID=cds-WP_021159191.1;Parent=gene-LDO49_RS28385;Dbxref=GenBank:WP_021159191.1;Name=WP_021159191.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338211.1;locus_tag=LDO49_RS28385;product=porin;protein_id=WP_021159191.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 23526 24860 . + . ID=gene-LDO49_RS28390;Name=LDO49_RS28390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28390;old_locus_tag=BCEP4_560024 NZ_CAJZAV010000264.1 Protein Homology CDS 23526 24860 . + 0 ID=cds-WP_224052596.1;Parent=gene-LDO49_RS28390;Dbxref=GenBank:WP_224052596.1;Name=WP_224052596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547759.1;locus_tag=LDO49_RS28390;product=chloride channel protein;protein_id=WP_224052596.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq pseudogene 25142 25264 . + . ID=gene-LDO49_RS37635;Name=LDO49_RS37635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37635;partial=true;pseudo=true;start_range=.,25142 NZ_CAJZAV010000264.1 Protein Homology CDS 25142 25264 . + 0 ID=cds-LDO49_RS37635;Parent=gene-LDO49_RS37635;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_175842482.1;locus_tag=LDO49_RS37635;partial=true;product=STM2901 family protein;pseudo=true;start_range=.,25142;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 25257 25604 . + . ID=gene-LDO49_RS28395;Name=LDO49_RS28395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28395;old_locus_tag=BCEP4_560025 NZ_CAJZAV010000264.1 Protein Homology CDS 25257 25604 . + 0 ID=cds-WP_224052597.1;Parent=gene-LDO49_RS28395;Dbxref=GenBank:WP_224052597.1;Name=WP_224052597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180220.1;locus_tag=LDO49_RS28395;product=DUF1493 family protein;protein_id=WP_224052597.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 25812 27134 . + . ID=gene-LDO49_RS28400;Name=LDO49_RS28400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28400;old_locus_tag=BCEP4_560026 NZ_CAJZAV010000264.1 Protein Homology CDS 25812 27134 . + 0 ID=cds-WP_027791531.1;Parent=gene-LDO49_RS28400;Dbxref=GenBank:WP_027791531.1;Name=WP_027791531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403593.1;locus_tag=LDO49_RS28400;product=TIGR00366 family protein;protein_id=WP_027791531.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 27193 28521 . - . ID=gene-LDO49_RS28405;Name=LDO49_RS28405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28405;old_locus_tag=BCEP4_560027 NZ_CAJZAV010000264.1 Protein Homology CDS 27193 28521 . - 0 ID=cds-WP_059853689.1;Parent=gene-LDO49_RS28405;Dbxref=GenBank:WP_059853689.1;Name=WP_059853689.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494904.1;locus_tag=LDO49_RS28405;product=MFS transporter;protein_id=WP_059853689.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 28745 29677 . - . ID=gene-LDO49_RS28410;Name=LDO49_RS28410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28410;old_locus_tag=BCEP4_560028 NZ_CAJZAV010000264.1 Protein Homology CDS 28745 29677 . - 0 ID=cds-WP_224052598.1;Parent=gene-LDO49_RS28410;Dbxref=GenBank:WP_224052598.1;Name=WP_224052598.1;Ontology_term=GO:0019475,GO:0043720,GO:0046872;gbkey=CDS;go_function=3-keto-5-aminohexanoate cleavage activity|0043720||IEA,metal ion binding|0046872||IEA;go_process=L-lysine fermentation|0019475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010118309.1;locus_tag=LDO49_RS28410;product=3-keto-5-aminohexanoate cleavage protein;protein_id=WP_224052598.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 29713 30519 . - . ID=gene-LDO49_RS28415;Name=LDO49_RS28415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28415;old_locus_tag=BCEP4_560029 NZ_CAJZAV010000264.1 Protein Homology CDS 29713 30519 . - 0 ID=cds-WP_224052599.1;Parent=gene-LDO49_RS28415;Dbxref=GenBank:WP_224052599.1;Name=WP_224052599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004266698.1;locus_tag=LDO49_RS28415;product=SDR family oxidoreductase;protein_id=WP_224052599.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 30588 31298 . - . ID=gene-LDO49_RS28420;Name=LDO49_RS28420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28420;old_locus_tag=BCEP4_560030 NZ_CAJZAV010000264.1 Protein Homology CDS 30588 31298 . - 0 ID=cds-WP_021159184.1;Parent=gene-LDO49_RS28420;Dbxref=GenBank:WP_021159184.1;Name=WP_021159184.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759283.1;locus_tag=LDO49_RS28420;product=GntR family transcriptional regulator;protein_id=WP_021159184.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 31414 31596 . + . ID=gene-LDO49_RS28425;Name=LDO49_RS28425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28425;old_locus_tag=BCEP4_560031 NZ_CAJZAV010000264.1 GeneMarkS-2+ CDS 31414 31596 . + 0 ID=cds-WP_224052600.1;Parent=gene-LDO49_RS28425;Dbxref=GenBank:WP_224052600.1;Name=WP_224052600.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS28425;product=hypothetical protein;protein_id=WP_224052600.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 31593 32045 . + . ID=gene-LDO49_RS28430;Name=LDO49_RS28430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28430;old_locus_tag=BCEP4_560032 NZ_CAJZAV010000264.1 Protein Homology CDS 31593 32045 . + 0 ID=cds-WP_224052601.1;Parent=gene-LDO49_RS28430;Dbxref=GenBank:WP_224052601.1;Name=WP_224052601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479081.1;locus_tag=LDO49_RS28430;product=type VI secretion system amidase immunity protein Tai4;protein_id=WP_224052601.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 32100 32891 . - . ID=gene-LDO49_RS28435;Name=LDO49_RS28435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28435;old_locus_tag=BCEP4_560033 NZ_CAJZAV010000264.1 Protein Homology CDS 32100 32891 . - 0 ID=cds-WP_048023065.1;Parent=gene-LDO49_RS28435;Dbxref=GenBank:WP_048023065.1;Name=WP_048023065.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547751.1;locus_tag=LDO49_RS28435;product=IclR family transcriptional regulator;protein_id=WP_048023065.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 33051 33827 . + . ID=gene-LDO49_RS28440;Name=LDO49_RS28440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28440;old_locus_tag=BCEP4_560035 NZ_CAJZAV010000264.1 Protein Homology CDS 33051 33827 . + 0 ID=cds-WP_175850489.1;Parent=gene-LDO49_RS28440;Dbxref=GenBank:WP_175850489.1;Name=WP_175850489.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547750.1;locus_tag=LDO49_RS28440;product=ABC transporter substrate-binding protein;protein_id=WP_175850489.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 33916 34572 . + . ID=gene-LDO49_RS28445;Name=LDO49_RS28445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28445;old_locus_tag=BCEP4_560036 NZ_CAJZAV010000264.1 Protein Homology CDS 33916 34572 . + 0 ID=cds-WP_021159179.1;Parent=gene-LDO49_RS28445;Dbxref=GenBank:WP_021159179.1;Name=WP_021159179.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482843.1;locus_tag=LDO49_RS28445;product=amino acid ABC transporter permease;protein_id=WP_021159179.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 34569 35324 . + . ID=gene-LDO49_RS28450;Name=LDO49_RS28450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28450;old_locus_tag=BCEP4_560037 NZ_CAJZAV010000264.1 Protein Homology CDS 34569 35324 . + 0 ID=cds-WP_048023059.1;Parent=gene-LDO49_RS28450;Dbxref=GenBank:WP_048023059.1;Name=WP_048023059.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340072.1;locus_tag=LDO49_RS28450;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_048023059.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 35321 36631 . + . ID=gene-LDO49_RS28455;Name=LDO49_RS28455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28455;old_locus_tag=BCEP4_560038 NZ_CAJZAV010000264.1 Protein Homology CDS 35321 36631 . + 0 ID=cds-WP_224052602.1;Parent=gene-LDO49_RS28455;Dbxref=GenBank:WP_224052602.1;Name=WP_224052602.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547748.1;locus_tag=LDO49_RS28455;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_224052602.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 36711 37442 . + . ID=gene-LDO49_RS28460;Name=LDO49_RS28460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28460;old_locus_tag=BCEP4_560039 NZ_CAJZAV010000264.1 Protein Homology CDS 36711 37442 . + 0 ID=cds-WP_021159178.1;Parent=gene-LDO49_RS28460;Dbxref=GenBank:WP_021159178.1;Name=WP_021159178.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882161.1;locus_tag=LDO49_RS28460;product=class I SAM-dependent methyltransferase;protein_id=WP_021159178.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 37479 38897 . - . ID=gene-LDO49_RS28465;Name=LDO49_RS28465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28465;old_locus_tag=BCEP4_560040 NZ_CAJZAV010000264.1 Protein Homology CDS 37479 38897 . - 0 ID=cds-WP_224052603.1;Parent=gene-LDO49_RS28465;Dbxref=GenBank:WP_224052603.1;Name=WP_224052603.1;Ontology_term=GO:0004130,GO:0016491,GO:0020037;gbkey=CDS;go_function=cytochrome-c peroxidase activity|0004130||IEA,oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752659.1;locus_tag=LDO49_RS28465;product=cytochrome-c peroxidase;protein_id=WP_224052603.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 39001 40674 . - . ID=gene-LDO49_RS28470;Name=LDO49_RS28470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28470;old_locus_tag=BCEP4_560041 NZ_CAJZAV010000264.1 Protein Homology CDS 39001 40674 . - 0 ID=cds-WP_048023053.1;Parent=gene-LDO49_RS28470;Dbxref=GenBank:WP_048023053.1;Name=WP_048023053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184686.1;locus_tag=LDO49_RS28470;product=phospholipase C;protein_id=WP_048023053.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 41024 41935 . + . ID=gene-LDO49_RS28475;Name=LDO49_RS28475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28475;old_locus_tag=BCEP4_560043 NZ_CAJZAV010000264.1 Protein Homology CDS 41024 41935 . + 0 ID=cds-WP_124587724.1;Parent=gene-LDO49_RS28475;Dbxref=GenBank:WP_124587724.1;Name=WP_124587724.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724927.1;locus_tag=LDO49_RS28475;product=EamA family transporter;protein_id=WP_124587724.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 41962 42435 . - . ID=gene-LDO49_RS28480;Name=LDO49_RS28480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28480;old_locus_tag=BCEP4_560044 NZ_CAJZAV010000264.1 Protein Homology CDS 41962 42435 . - 0 ID=cds-WP_021159174.1;Parent=gene-LDO49_RS28480;Dbxref=GenBank:WP_021159174.1;Name=WP_021159174.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010096283.1;locus_tag=LDO49_RS28480;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_021159174.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 42755 44140 . + . ID=gene-LDO49_RS28485;Name=LDO49_RS28485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28485;old_locus_tag=BCEP4_560045 NZ_CAJZAV010000264.1 Protein Homology CDS 42755 44140 . + 0 ID=cds-WP_059623033.1;Parent=gene-LDO49_RS28485;Dbxref=GenBank:WP_059623033.1;Name=WP_059623033.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329535.1;locus_tag=LDO49_RS28485;product=amino acid permease;protein_id=WP_059623033.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 44186 45388 . + . ID=gene-LDO49_RS28490;Name=LDO49_RS28490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28490;old_locus_tag=BCEP4_560046 NZ_CAJZAV010000264.1 Protein Homology CDS 44186 45388 . + 0 ID=cds-WP_021159172.1;Parent=gene-LDO49_RS28490;Dbxref=GenBank:WP_021159172.1;Name=WP_021159172.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752666.1;locus_tag=LDO49_RS28490;product=amino acid aminotransferase;protein_id=WP_021159172.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 45553 45951 . + . ID=gene-LDO49_RS28495;Name=LDO49_RS28495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28495;old_locus_tag=BCEP4_560047 NZ_CAJZAV010000264.1 Protein Homology CDS 45553 45951 . + 0 ID=cds-WP_048023166.1;Parent=gene-LDO49_RS28495;Dbxref=GenBank:WP_048023166.1;Name=WP_048023166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899438.1;locus_tag=LDO49_RS28495;product=DUF488 domain-containing protein;protein_id=WP_048023166.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 46110 46394 . + . ID=gene-LDO49_RS28500;Name=LDO49_RS28500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28500;old_locus_tag=BCEP4_560048 NZ_CAJZAV010000264.1 Protein Homology CDS 46110 46394 . + 0 ID=cds-WP_027791546.1;Parent=gene-LDO49_RS28500;Dbxref=GenBank:WP_027791546.1;Name=WP_027791546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355270.1;locus_tag=LDO49_RS28500;product=DUF1488 domain-containing protein;protein_id=WP_027791546.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 46417 46656 . + . ID=gene-LDO49_RS28505;Name=LDO49_RS28505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28505;old_locus_tag=BCEP4_560049 NZ_CAJZAV010000264.1 Protein Homology CDS 46417 46656 . + 0 ID=cds-WP_059484949.1;Parent=gene-LDO49_RS28505;Dbxref=GenBank:WP_059484949.1;Name=WP_059484949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479066.1;locus_tag=LDO49_RS28505;product=hypothetical protein;protein_id=WP_059484949.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 46812 47162 . + . ID=gene-LDO49_RS28510;Name=LDO49_RS28510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28510;old_locus_tag=BCEP4_560050 NZ_CAJZAV010000264.1 Protein Homology CDS 46812 47162 . + 0 ID=cds-WP_021159168.1;Parent=gene-LDO49_RS28510;Dbxref=GenBank:WP_021159168.1;Name=WP_021159168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752670.1;locus_tag=LDO49_RS28510;product=hypothetical protein;protein_id=WP_021159168.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 47220 47999 . - . ID=gene-LDO49_RS28515;Name=LDO49_RS28515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28515;old_locus_tag=BCEP4_560051 NZ_CAJZAV010000264.1 Protein Homology CDS 47220 47999 . - 0 ID=cds-WP_021159167.1;Parent=gene-LDO49_RS28515;Dbxref=GenBank:WP_021159167.1;Name=WP_021159167.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765894.1;locus_tag=LDO49_RS28515;product=helix-turn-helix domain-containing protein;protein_id=WP_021159167.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 48016 48420 . - . ID=gene-LDO49_RS28520;Name=LDO49_RS28520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28520;old_locus_tag=BCEP4_560053 NZ_CAJZAV010000264.1 Protein Homology CDS 48016 48420 . - 0 ID=cds-WP_021159166.1;Parent=gene-LDO49_RS28520;Dbxref=GenBank:WP_021159166.1;Name=WP_021159166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759295.1;locus_tag=LDO49_RS28520;product=response regulator transcription factor;protein_id=WP_021159166.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 48588 49523 . - . ID=gene-LDO49_RS28525;Name=lhpI;gbkey=Gene;gene=lhpI;gene_biotype=protein_coding;locus_tag=LDO49_RS28525;old_locus_tag=BCEP4_560054 NZ_CAJZAV010000264.1 Protein Homology CDS 48588 49523 . - 0 ID=cds-WP_027791550.1;Parent=gene-LDO49_RS28525;Dbxref=GenBank:WP_027791550.1;Name=WP_027791550.1;Ontology_term=GO:0047125,GO:0050241;gbkey=CDS;gene=lhpI;go_function=delta1-piperideine-2-carboxylate reductase activity|0047125||IEA,pyrroline-2-carboxylate reductase activity|0050241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899432.1;locus_tag=LDO49_RS28525;product=bifunctional Delta(1)-pyrroline-2-carboxylate/Delta(1)-piperideine-2-carboxylate reductase;protein_id=WP_027791550.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 49787 50524 . + . ID=gene-LDO49_RS28530;Name=LDO49_RS28530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28530;old_locus_tag=BCEP4_560056 NZ_CAJZAV010000264.1 Protein Homology CDS 49787 50524 . + 0 ID=cds-WP_021159164.1;Parent=gene-LDO49_RS28530;Dbxref=GenBank:WP_021159164.1;Name=WP_021159164.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355264.1;locus_tag=LDO49_RS28530;product=FadR/GntR family transcriptional regulator;protein_id=WP_021159164.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 50646 51767 . + . ID=gene-LDO49_RS28535;Name=LDO49_RS28535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28535;old_locus_tag=BCEP4_560057 NZ_CAJZAV010000264.1 Protein Homology CDS 50646 51767 . + 0 ID=cds-WP_021159163.1;Parent=gene-LDO49_RS28535;Dbxref=GenBank:WP_021159163.1;Name=WP_021159163.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494887.1;locus_tag=LDO49_RS28535;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_021159163.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 51857 52864 . + . ID=gene-LDO49_RS28540;Name=lhpH;gbkey=Gene;gene=lhpH;gene_biotype=protein_coding;locus_tag=LDO49_RS28540;old_locus_tag=BCEP4_560058 NZ_CAJZAV010000264.1 Protein Homology CDS 51857 52864 . + 0 ID=cds-WP_224052604.1;Parent=gene-LDO49_RS28540;Dbxref=GenBank:WP_224052604.1;Name=WP_224052604.1;Ontology_term=GO:0050346;gbkey=CDS;gene=lhpH;go_function=trans-L-3-hydroxyproline dehydratase activity|0050346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481709.1;locus_tag=LDO49_RS28540;product=trans-3-hydroxy-L-proline dehydratase;protein_id=WP_224052604.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 53038 55626 . + . ID=gene-LDO49_RS28545;Name=LDO49_RS28545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28545;old_locus_tag=BCEP4_560060 NZ_CAJZAV010000264.1 Protein Homology CDS 53038 55626 . + 0 ID=cds-WP_224052605.1;Parent=gene-LDO49_RS28545;Dbxref=GenBank:WP_224052605.1;Name=WP_224052605.1;Ontology_term=GO:0006508,GO:0009252,GO:0008658,GO:0008955,GO:0009002;gbkey=CDS;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547735.1;locus_tag=LDO49_RS28545;product=penicillin-binding protein 1A;protein_id=WP_224052605.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 55706 56581 . + . ID=gene-LDO49_RS28550;Name=LDO49_RS28550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28550;old_locus_tag=BCEP4_560061 NZ_CAJZAV010000264.1 Protein Homology CDS 55706 56581 . + 0 ID=cds-WP_224052606.1;Parent=gene-LDO49_RS28550;Dbxref=GenBank:WP_224052606.1;Name=WP_224052606.1;Ontology_term=GO:0035438;gbkey=CDS;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329516.1;locus_tag=LDO49_RS28550;product=PilZ domain-containing protein;protein_id=WP_224052606.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 56805 57131 . + . ID=gene-LDO49_RS28555;Name=LDO49_RS28555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28555;old_locus_tag=BCEP4_560062 NZ_CAJZAV010000264.1 Protein Homology CDS 56805 57131 . + 0 ID=cds-WP_224052607.1;Parent=gene-LDO49_RS28555;Dbxref=GenBank:WP_224052607.1;Name=WP_224052607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547733.1;locus_tag=LDO49_RS28555;product=DUF4148 domain-containing protein;protein_id=WP_224052607.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq pseudogene 57266 58157 . - . ID=gene-LDO49_RS28560;Name=LDO49_RS28560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS28560;old_locus_tag=BCEP4_560063;pseudo=true NZ_CAJZAV010000264.1 Protein Homology CDS 57266 58157 . - 0 ID=cds-LDO49_RS28560;Parent=gene-LDO49_RS28560;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007838995.1;locus_tag=LDO49_RS28560;product=DMT family transporter;pseudo=true;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 58166 58954 . - . ID=gene-LDO49_RS28565;Name=LDO49_RS28565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28565;old_locus_tag=BCEP4_560064 NZ_CAJZAV010000264.1 Protein Homology CDS 58166 58954 . - 0 ID=cds-WP_124474717.1;Parent=gene-LDO49_RS28565;Dbxref=GenBank:WP_124474717.1;Name=WP_124474717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355257.1;locus_tag=LDO49_RS28565;product=DUF2182 domain-containing protein;protein_id=WP_124474717.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 58978 59580 . - . ID=gene-LDO49_RS28570;Name=LDO49_RS28570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28570;old_locus_tag=BCEP4_560065 NZ_CAJZAV010000264.1 Protein Homology CDS 58978 59580 . - 0 ID=cds-WP_060226188.1;Parent=gene-LDO49_RS28570;Dbxref=GenBank:WP_060226188.1;Name=WP_060226188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012745932.1;locus_tag=LDO49_RS28570;product=DUF1326 domain-containing protein;protein_id=WP_060226188.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 59929 60333 . + . ID=gene-LDO49_RS28575;Name=LDO49_RS28575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28575;old_locus_tag=BCEP4_560066 NZ_CAJZAV010000264.1 Protein Homology CDS 59929 60333 . + 0 ID=cds-WP_021159155.1;Parent=gene-LDO49_RS28575;Dbxref=GenBank:WP_021159155.1;Name=WP_021159155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899422.1;locus_tag=LDO49_RS28575;product=lysozyme inhibitor LprI family protein;protein_id=WP_021159155.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 60407 61054 . - . ID=gene-LDO49_RS28580;Name=LDO49_RS28580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28580;old_locus_tag=BCEP4_560067 NZ_CAJZAV010000264.1 Protein Homology CDS 60407 61054 . - 0 ID=cds-WP_006483707.1;Parent=gene-LDO49_RS28580;Dbxref=GenBank:WP_006483707.1;Name=WP_006483707.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329510.1;locus_tag=LDO49_RS28580;product=response regulator;protein_id=WP_006483707.1;transl_table=11 NZ_CAJZAV010000264.1 RefSeq gene 61051 62511 . - . ID=gene-LDO49_RS28585;Name=LDO49_RS28585;end_range=62511,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28585;old_locus_tag=BCEP4_560068;partial=true NZ_CAJZAV010000264.1 Protein Homology CDS 61051 62511 . - 0 ID=cds-WP_224052609.1;Parent=gene-LDO49_RS28585;Dbxref=GenBank:WP_224052609.1;Name=WP_224052609.1;Ontology_term=GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;end_range=62511,.;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479053.1;locus_tag=LDO49_RS28585;partial=true;product=PAS domain-containing sensor histidine kinase;protein_id=WP_224052609.1;transl_table=11 ##sequence-region NZ_CAJZAV010000265.1 1 22828 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000265.1 RefSeq region 1 22828 . + . ID=NZ_CAJZAV010000265.1:1..22828;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_57 NZ_CAJZAV010000265.1 RefSeq gene 1 838 . + . ID=gene-LDO49_RS28590;Name=LDO49_RS28590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28590;old_locus_tag=BCEP4_570001;partial=true;start_range=.,1 NZ_CAJZAV010000265.1 Protein Homology CDS 1 838 . + 1 ID=cds-WP_224052610.1;Parent=gene-LDO49_RS28590;Dbxref=GenBank:WP_224052610.1;Name=WP_224052610.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880432.1;locus_tag=LDO49_RS28590;partial=true;product=TolC family protein;protein_id=WP_224052610.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000265.1 RefSeq gene 1014 2285 . - . ID=gene-LDO49_RS28595;Name=LDO49_RS28595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28595;old_locus_tag=BCEP4_570002 NZ_CAJZAV010000265.1 Protein Homology CDS 1014 2285 . - 0 ID=cds-WP_060147988.1;Parent=gene-LDO49_RS28595;Dbxref=GenBank:WP_060147988.1;Name=WP_060147988.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337481.1;locus_tag=LDO49_RS28595;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_060147988.1;transl_table=11 NZ_CAJZAV010000265.1 RefSeq gene 2500 2772 . + . ID=gene-LDO49_RS28600;Name=LDO49_RS28600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28600;old_locus_tag=BCEP4_570003 NZ_CAJZAV010000265.1 Protein Homology CDS 2500 2772 . + 0 ID=cds-WP_027792630.1;Parent=gene-LDO49_RS28600;Dbxref=GenBank:WP_027792630.1;Name=WP_027792630.1;Ontology_term=GO:0016579,GO:0043161,GO:0004843;gbkey=CDS;go_function=cysteine-type deubiquitinase activity|0004843||IEA;go_process=protein deubiquitination|0016579||IEA,proteasome-mediated ubiquitin-dependent protein catabolic process|0043161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012406060.1;locus_tag=LDO49_RS28600;product=ubiquitin carboxyl-terminal hydrolase 14;protein_id=WP_027792630.1;transl_table=11 NZ_CAJZAV010000265.1 RefSeq gene 2907 3392 . + . ID=gene-LDO49_RS28605;Name=LDO49_RS28605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28605;old_locus_tag=BCEP4_570004 NZ_CAJZAV010000265.1 Protein Homology CDS 2907 3392 . + 0 ID=cds-WP_060147986.1;Parent=gene-LDO49_RS28605;Dbxref=GenBank:WP_060147986.1;Name=WP_060147986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352115.1;locus_tag=LDO49_RS28605;product=VOC family protein;protein_id=WP_060147986.1;transl_table=11 NZ_CAJZAV010000265.1 RefSeq gene 3394 4620 . + . ID=gene-LDO49_RS28610;Name=LDO49_RS28610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28610;old_locus_tag=BCEP4_570005 NZ_CAJZAV010000265.1 Protein Homology CDS 3394 4620 . + 0 ID=cds-WP_060147984.1;Parent=gene-LDO49_RS28610;Dbxref=GenBank:WP_060147984.1;Name=WP_060147984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352114.1;locus_tag=LDO49_RS28610;product=FAD binding domain-containing protein;protein_id=WP_060147984.1;transl_table=11 NZ_CAJZAV010000265.1 RefSeq gene 4707 5066 . + . ID=gene-LDO49_RS28615;Name=LDO49_RS28615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28615;old_locus_tag=BCEP4_570006 NZ_CAJZAV010000265.1 Protein Homology CDS 4707 5066 . + 0 ID=cds-WP_021158270.1;Parent=gene-LDO49_RS28615;Dbxref=GenBank:WP_021158270.1;Name=WP_021158270.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726100.1;locus_tag=LDO49_RS28615;product=DUF485 domain-containing protein;protein_id=WP_021158270.1;transl_table=11 NZ_CAJZAV010000265.1 RefSeq gene 5063 6721 . + . ID=gene-LDO49_RS28620;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=LDO49_RS28620;old_locus_tag=BCEP4_570007 NZ_CAJZAV010000265.1 Protein Homology CDS 5063 6721 . + 0 ID=cds-WP_060147982.1;Parent=gene-LDO49_RS28620;Dbxref=GenBank:WP_060147982.1;Name=WP_060147982.1;gbkey=CDS;gene=actP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352112.1;locus_tag=LDO49_RS28620;product=cation/acetate symporter ActP;protein_id=WP_060147982.1;transl_table=11 NZ_CAJZAV010000265.1 RefSeq gene 6750 7886 . + . ID=gene-LDO49_RS28625;Name=LDO49_RS28625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28625;old_locus_tag=BCEP4_570008 NZ_CAJZAV010000265.1 Protein Homology CDS 6750 7886 . + 0 ID=cds-WP_230952237.1;Parent=gene-LDO49_RS28625;Dbxref=GenBank:WP_230952237.1;Name=WP_230952237.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007739392.1;locus_tag=LDO49_RS28625;product=amidohydrolase family protein;protein_id=WP_230952237.1;transl_table=11 NZ_CAJZAV010000265.1 RefSeq gene 8055 9179 . + . ID=gene-LDO49_RS28630;Name=LDO49_RS28630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28630;old_locus_tag=BCEP4_570009 NZ_CAJZAV010000265.1 Protein Homology CDS 8055 9179 . + 0 ID=cds-WP_059485787.1;Parent=gene-LDO49_RS28630;Dbxref=GenBank:WP_059485787.1;Name=WP_059485787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352111.1;locus_tag=LDO49_RS28630;product=FAD binding domain-containing protein;protein_id=WP_059485787.1;transl_table=11 NZ_CAJZAV010000265.1 RefSeq gene 9591 10871 . + . ID=gene-LDO49_RS28635;Name=LDO49_RS28635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28635;old_locus_tag=BCEP4_570010 NZ_CAJZAV010000265.1 Protein Homology CDS 9591 10871 . + 0 ID=cds-WP_021158265.1;Parent=gene-LDO49_RS28635;Dbxref=GenBank:WP_021158265.1;Name=WP_021158265.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481364.1;locus_tag=LDO49_RS28635;product=c-type cytochrome;protein_id=WP_021158265.1;transl_table=11 NZ_CAJZAV010000265.1 RefSeq gene 10868 11368 . + . ID=gene-LDO49_RS28640;Name=LDO49_RS28640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28640;old_locus_tag=BCEP4_570011 NZ_CAJZAV010000265.1 Protein Homology CDS 10868 11368 . + 0 ID=cds-WP_060147980.1;Parent=gene-LDO49_RS28640;Dbxref=GenBank:WP_060147980.1;Name=WP_060147980.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498476.1;locus_tag=LDO49_RS28640;product=(2Fe-2S)-binding protein;protein_id=WP_060147980.1;transl_table=11 NZ_CAJZAV010000265.1 RefSeq gene 11368 13629 . + . ID=gene-LDO49_RS28645;Name=LDO49_RS28645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28645;old_locus_tag=BCEP4_570012 NZ_CAJZAV010000265.1 Protein Homology CDS 11368 13629 . + 0 ID=cds-WP_060147978.1;Parent=gene-LDO49_RS28645;Dbxref=GenBank:WP_060147978.1;Name=WP_060147978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880441.1;locus_tag=LDO49_RS28645;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=WP_060147978.1;transl_table=11 NZ_CAJZAV010000265.1 RefSeq gene 13705 14622 . + . ID=gene-LDO49_RS28650;Name=LDO49_RS28650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28650;old_locus_tag=BCEP4_570013 NZ_CAJZAV010000265.1 Protein Homology CDS 13705 14622 . + 0 ID=cds-WP_021158262.1;Parent=gene-LDO49_RS28650;Dbxref=GenBank:WP_021158262.1;Name=WP_021158262.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100311.1;locus_tag=LDO49_RS28650;product=LysR family transcriptional regulator;protein_id=WP_021158262.1;transl_table=11 NZ_CAJZAV010000265.1 RefSeq gene 14785 15153 . + . ID=gene-LDO49_RS28655;Name=LDO49_RS28655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28655;old_locus_tag=BCEP4_570014 NZ_CAJZAV010000265.1 GeneMarkS-2+ CDS 14785 15153 . + 0 ID=cds-WP_124475806.1;Parent=gene-LDO49_RS28655;Dbxref=GenBank:WP_124475806.1;Name=WP_124475806.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS28655;product=hypothetical protein;protein_id=WP_124475806.1;transl_table=11 NZ_CAJZAV010000265.1 RefSeq gene 15276 16493 . + . ID=gene-LDO49_RS28660;Name=LDO49_RS28660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28660;old_locus_tag=BCEP4_570015 NZ_CAJZAV010000265.1 Protein Homology CDS 15276 16493 . + 0 ID=cds-WP_021158260.1;Parent=gene-LDO49_RS28660;Dbxref=GenBank:WP_021158260.1;Name=WP_021158260.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751576.1;locus_tag=LDO49_RS28660;product=MFS transporter;protein_id=WP_021158260.1;transl_table=11 NZ_CAJZAV010000265.1 RefSeq gene 16665 17777 . + . ID=gene-LDO49_RS28665;Name=LDO49_RS28665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28665;old_locus_tag=BCEP4_570016 NZ_CAJZAV010000265.1 Protein Homology CDS 16665 17777 . + 0 ID=cds-WP_060147975.1;Parent=gene-LDO49_RS28665;Dbxref=GenBank:WP_060147975.1;Name=WP_060147975.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751575.1;locus_tag=LDO49_RS28665;product=alkene reductase;protein_id=WP_060147975.1;transl_table=11 NZ_CAJZAV010000265.1 RefSeq gene 17865 18536 . - . ID=gene-LDO49_RS28670;Name=LDO49_RS28670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28670;old_locus_tag=BCEP4_570017 NZ_CAJZAV010000265.1 Protein Homology CDS 17865 18536 . - 0 ID=cds-WP_021158258.1;Parent=gene-LDO49_RS28670;Dbxref=GenBank:WP_021158258.1;Name=WP_021158258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760334.1;locus_tag=LDO49_RS28670;product=hypothetical protein;protein_id=WP_021158258.1;transl_table=11 NZ_CAJZAV010000265.1 RefSeq gene 18643 20535 . - . ID=gene-LDO49_RS28675;Name=LDO49_RS28675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28675;old_locus_tag=BCEP4_570018 NZ_CAJZAV010000265.1 Protein Homology CDS 18643 20535 . - 0 ID=cds-WP_060148017.1;Parent=gene-LDO49_RS28675;Dbxref=GenBank:WP_060148017.1;Name=WP_060148017.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012371993.1;locus_tag=LDO49_RS28675;product=amidohydrolase;protein_id=WP_060148017.1;transl_table=11 NZ_CAJZAV010000265.1 RefSeq pseudogene 20700 21127 . - . ID=gene-LDO49_RS38350;Name=LDO49_RS38350;end_range=21127,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38350;old_locus_tag=BCEP4_570019;partial=true;pseudo=true NZ_CAJZAV010000265.1 Protein Homology CDS 20700 21127 . - 2 ID=cds-LDO49_RS38350;Parent=gene-LDO49_RS38350;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=21127,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751572.1;locus_tag=LDO49_RS38350;partial=true;product=transcriptional regulator;pseudo=true;transl_table=11 NZ_CAJZAV010000265.1 RefSeq gene 21138 22828 . - . ID=gene-LDO49_RS37445;Name=LDO49_RS37445;end_range=22828,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37445;old_locus_tag=BCEP4_570020;partial=true;start_range=.,21138 NZ_CAJZAV010000265.1 Protein Homology CDS 21138 22828 . - 1 ID=cds-WP_443798014.1;Parent=gene-LDO49_RS37445;Dbxref=GenBank:WP_443798014.1;Name=WP_443798014.1;Ontology_term=GO:0005524;end_range=22828,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751572.1;locus_tag=LDO49_RS37445;partial=true;product=ATP-binding protein;protein_id=WP_443798014.1;start_range=.,21138;transl_table=11 ##sequence-region NZ_CAJZAV010000266.1 1 56680 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000266.1 RefSeq region 1 56680 . + . ID=NZ_CAJZAV010000266.1:1..56680;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_58 NZ_CAJZAV010000266.1 RefSeq pseudogene 1 401 . + . ID=gene-LDO49_RS28680;Name=LDO49_RS28680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS28680;old_locus_tag=BCEP4_580001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000266.1 Protein Homology CDS 1 401 . + 2 ID=cds-LDO49_RS28680;Parent=gene-LDO49_RS28680;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478570.1;locus_tag=LDO49_RS28680;partial=true;product=MFS transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 418 1527 . + . ID=gene-LDO49_RS28685;Name=LDO49_RS28685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28685;old_locus_tag=BCEP4_580002 NZ_CAJZAV010000266.1 Protein Homology CDS 418 1527 . + 0 ID=cds-WP_224052611.1;Parent=gene-LDO49_RS28685;Dbxref=GenBank:WP_224052611.1;Name=WP_224052611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328707.1;locus_tag=LDO49_RS28685;product=class II histone deacetylase;protein_id=WP_224052611.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 1641 1871 . + . ID=gene-LDO49_RS28690;Name=LDO49_RS28690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28690;old_locus_tag=BCEP4_580003 NZ_CAJZAV010000266.1 Protein Homology CDS 1641 1871 . + 0 ID=cds-WP_021160392.1;Parent=gene-LDO49_RS28690;Dbxref=GenBank:WP_021160392.1;Name=WP_021160392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352370.1;locus_tag=LDO49_RS28690;product=hypothetical protein;protein_id=WP_021160392.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 1975 2442 . - . ID=gene-LDO49_RS28695;Name=LDO49_RS28695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28695 NZ_CAJZAV010000266.1 GeneMarkS-2+ CDS 1975 2442 . - 0 ID=cds-WP_224052612.1;Parent=gene-LDO49_RS28695;Dbxref=GenBank:WP_224052612.1;Name=WP_224052612.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS28695;product=hypothetical protein;protein_id=WP_224052612.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 2467 2553 . - . ID=gene-LDO49_RS28700;Name=LDO49_RS28700;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS28700;old_locus_tag=BCEP4_TRNA41 NZ_CAJZAV010000266.1 tRNAscan-SE tRNA 2467 2553 . - . ID=rna-LDO49_RS28700;Parent=gene-LDO49_RS28700;anticodon=(pos:complement(2517..2519));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS28700;product=tRNA-Leu NZ_CAJZAV010000266.1 tRNAscan-SE exon 2467 2553 . - . ID=exon-LDO49_RS28700-1;Parent=rna-LDO49_RS28700;anticodon=(pos:complement(2517..2519));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS28700;product=tRNA-Leu NZ_CAJZAV010000266.1 RefSeq gene 2789 3622 . + . ID=gene-LDO49_RS28705;Name=hpnD;gbkey=Gene;gene=hpnD;gene_biotype=protein_coding;locus_tag=LDO49_RS28705;old_locus_tag=BCEP4_580005 NZ_CAJZAV010000266.1 Protein Homology CDS 2789 3622 . + 0 ID=cds-WP_224052613.1;Parent=gene-LDO49_RS28705;Dbxref=GenBank:WP_224052613.1;Name=WP_224052613.1;Ontology_term=GO:0016117,GO:0046905;gbkey=CDS;gene=hpnD;go_function=15-cis-phytoene synthase activity|0046905||IEA;go_process=carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417261.1;locus_tag=LDO49_RS28705;product=presqualene diphosphate synthase HpnD;protein_id=WP_224052613.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 3636 4844 . - . ID=gene-LDO49_RS28710;Name=LDO49_RS28710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28710;old_locus_tag=BCEP4_580006 NZ_CAJZAV010000266.1 Protein Homology CDS 3636 4844 . - 0 ID=cds-WP_224052614.1;Parent=gene-LDO49_RS28710;Dbxref=GenBank:WP_224052614.1;Name=WP_224052614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549600.1;locus_tag=LDO49_RS28710;product=DUF1501 domain-containing protein;protein_id=WP_224052614.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 4912 6414 . - . ID=gene-LDO49_RS28715;Name=LDO49_RS28715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28715;old_locus_tag=BCEP4_580007 NZ_CAJZAV010000266.1 Protein Homology CDS 4912 6414 . - 0 ID=cds-WP_224052615.1;Parent=gene-LDO49_RS28715;Dbxref=GenBank:WP_224052615.1;Name=WP_224052615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549599.1;locus_tag=LDO49_RS28715;product=DUF1800 domain-containing protein;protein_id=WP_224052615.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 6554 6832 . - . ID=gene-LDO49_RS28720;Name=LDO49_RS28720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28720;old_locus_tag=BCEP4_580008 NZ_CAJZAV010000266.1 Protein Homology CDS 6554 6832 . - 0 ID=cds-WP_011352385.1;Parent=gene-LDO49_RS28720;Dbxref=GenBank:WP_011352385.1;Name=WP_011352385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352385.1;locus_tag=LDO49_RS28720;product=hypothetical protein;protein_id=WP_011352385.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 7091 7825 . + . ID=gene-LDO49_RS28725;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=LDO49_RS28725;old_locus_tag=BCEP4_580009 NZ_CAJZAV010000266.1 Protein Homology CDS 7091 7825 . + 0 ID=cds-WP_006478565.1;Parent=gene-LDO49_RS28725;Dbxref=GenBank:WP_006478565.1;Name=WP_006478565.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009517537.1;locus_tag=LDO49_RS28725;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_006478565.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 7866 9227 . + . ID=gene-LDO49_RS28730;Name=LDO49_RS28730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28730;old_locus_tag=BCEP4_580010 NZ_CAJZAV010000266.1 Protein Homology CDS 7866 9227 . + 0 ID=cds-WP_021160387.1;Parent=gene-LDO49_RS28730;Dbxref=GenBank:WP_021160387.1;Name=WP_021160387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364087.1;locus_tag=LDO49_RS28730;product=ATP-binding protein;protein_id=WP_021160387.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 9417 9965 . + . ID=gene-LDO49_RS28735;Name=LDO49_RS28735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28735;old_locus_tag=BCEP4_580011 NZ_CAJZAV010000266.1 Protein Homology CDS 9417 9965 . + 0 ID=cds-WP_006478563.1;Parent=gene-LDO49_RS28735;Dbxref=GenBank:WP_006478563.1;Name=WP_006478563.1;Ontology_term=GO:0008379;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192241.1;locus_tag=LDO49_RS28735;product=peroxiredoxin;protein_id=WP_006478563.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 10042 10569 . + . ID=gene-LDO49_RS28740;Name=LDO49_RS28740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28740;old_locus_tag=BCEP4_580012 NZ_CAJZAV010000266.1 Protein Homology CDS 10042 10569 . + 0 ID=cds-WP_011352388.1;Parent=gene-LDO49_RS28740;Dbxref=GenBank:WP_011352388.1;Name=WP_011352388.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193734.1;locus_tag=LDO49_RS28740;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_011352388.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 10706 11191 . - . ID=gene-LDO49_RS28745;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=LDO49_RS28745;old_locus_tag=BCEP4_580013 NZ_CAJZAV010000266.1 Protein Homology CDS 10706 11191 . - 0 ID=cds-WP_021160386.1;Parent=gene-LDO49_RS28745;Dbxref=GenBank:WP_021160386.1;Name=WP_021160386.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402219.1;locus_tag=LDO49_RS28745;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_021160386.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 11220 11930 . - . ID=gene-LDO49_RS28750;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=LDO49_RS28750;old_locus_tag=BCEP4_580014 NZ_CAJZAV010000266.1 Protein Homology CDS 11220 11930 . - 0 ID=cds-WP_021160385.1;Parent=gene-LDO49_RS28750;Dbxref=GenBank:WP_021160385.1;Name=WP_021160385.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402218.1;locus_tag=LDO49_RS28750;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_021160385.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 12038 15508 . + . ID=gene-LDO49_RS28755;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=LDO49_RS28755;old_locus_tag=BCEP4_580015 NZ_CAJZAV010000266.1 Protein Homology CDS 12038 15508 . + 0 ID=cds-WP_048020979.1;Parent=gene-LDO49_RS28755;Dbxref=GenBank:WP_048020979.1;Name=WP_048020979.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415640.1;locus_tag=LDO49_RS28755;product=transcription-repair coupling factor;protein_id=WP_048020979.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 15624 16844 . + . ID=gene-LDO49_RS28760;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=LDO49_RS28760;old_locus_tag=BCEP4_580016 NZ_CAJZAV010000266.1 Protein Homology CDS 15624 16844 . + 0 ID=cds-WP_021160382.1;Parent=gene-LDO49_RS28760;Dbxref=GenBank:WP_021160382.1;Name=WP_021160382.1;Ontology_term=GO:0006526,GO:0006592,GO:0008777;gbkey=CDS;gene=argE;go_function=acetylornithine deacetylase activity|0008777||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896786.1;locus_tag=LDO49_RS28760;product=acetylornithine deacetylase;protein_id=WP_021160382.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 16905 17924 . + . ID=gene-LDO49_RS28765;Name=LDO49_RS28765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28765;old_locus_tag=BCEP4_580017 NZ_CAJZAV010000266.1 Protein Homology CDS 16905 17924 . + 0 ID=cds-WP_021160381.1;Parent=gene-LDO49_RS28765;Dbxref=GenBank:WP_021160381.1;Name=WP_021160381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364092.1;locus_tag=LDO49_RS28765;product=threonine/serine dehydratase;protein_id=WP_021160381.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 18121 18540 . + . ID=gene-LDO49_RS28770;Name=LDO49_RS28770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28770;old_locus_tag=BCEP4_580018 NZ_CAJZAV010000266.1 Protein Homology CDS 18121 18540 . + 0 ID=cds-WP_059678108.1;Parent=gene-LDO49_RS28770;Dbxref=GenBank:WP_059678108.1;Name=WP_059678108.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402213.1;locus_tag=LDO49_RS28770;product=DUF3574 domain-containing protein;protein_id=WP_059678108.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 18624 21143 . - . ID=gene-LDO49_RS28775;Name=LDO49_RS28775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28775;old_locus_tag=BCEP4_580019 NZ_CAJZAV010000266.1 Protein Homology CDS 18624 21143 . - 0 ID=cds-WP_224052616.1;Parent=gene-LDO49_RS28775;Dbxref=GenBank:WP_224052616.1;Name=WP_224052616.1;Ontology_term=GO:0006508,GO:0009252,GO:0008658,GO:0008955,GO:0009002;gbkey=CDS;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415646.1;locus_tag=LDO49_RS28775;product=penicillin-binding protein 1A;protein_id=WP_224052616.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 21587 22267 . + . ID=gene-LDO49_RS28780;Name=LDO49_RS28780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28780;old_locus_tag=BCEP4_580020 NZ_CAJZAV010000266.1 Protein Homology CDS 21587 22267 . + 0 ID=cds-WP_021160377.1;Parent=gene-LDO49_RS28780;Dbxref=GenBank:WP_021160377.1;Name=WP_021160377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193810.1;locus_tag=LDO49_RS28780;product=PspA/IM30 family protein;protein_id=WP_021160377.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 22358 23518 . + . ID=gene-LDO49_RS28785;Name=LDO49_RS28785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28785;old_locus_tag=BCEP4_580021 NZ_CAJZAV010000266.1 Protein Homology CDS 22358 23518 . + 0 ID=cds-WP_224052617.1;Parent=gene-LDO49_RS28785;Dbxref=GenBank:WP_224052617.1;Name=WP_224052617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467640.1;locus_tag=LDO49_RS28785;product=tetratricopeptide repeat protein;protein_id=WP_224052617.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 23751 24182 . + . ID=gene-LDO49_RS28790;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=LDO49_RS28790;old_locus_tag=BCEP4_580022 NZ_CAJZAV010000266.1 Protein Homology CDS 23751 24182 . + 0 ID=cds-WP_006487991.1;Parent=gene-LDO49_RS28790;Dbxref=GenBank:WP_006487991.1;Name=WP_006487991.1;Ontology_term=GO:0034220,GO:0008381,GO:0016020;gbkey=CDS;gene=mscL;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487991.1;locus_tag=LDO49_RS28790;product=large conductance mechanosensitive channel protein MscL;protein_id=WP_006487991.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 24516 24962 . + . ID=gene-LDO49_RS28795;Name=LDO49_RS28795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28795;old_locus_tag=BCEP4_580024 NZ_CAJZAV010000266.1 Protein Homology CDS 24516 24962 . + 0 ID=cds-WP_027784713.1;Parent=gene-LDO49_RS28795;Dbxref=GenBank:WP_027784713.1;Name=WP_027784713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331909.1;locus_tag=LDO49_RS28795;product=hypothetical protein;protein_id=WP_027784713.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 25029 25922 . - . ID=gene-LDO49_RS28800;Name=LDO49_RS28800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28800;old_locus_tag=BCEP4_580026 NZ_CAJZAV010000266.1 Protein Homology CDS 25029 25922 . - 0 ID=cds-WP_060073049.1;Parent=gene-LDO49_RS28800;Dbxref=GenBank:WP_060073049.1;Name=WP_060073049.1;Ontology_term=GO:0016491,GO:0050661,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493213.1;locus_tag=LDO49_RS28800;product=NAD(P)-dependent oxidoreductase;protein_id=WP_060073049.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 26058 26267 . + . ID=gene-LDO49_RS28805;Name=LDO49_RS28805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28805;old_locus_tag=BCEP4_580025 NZ_CAJZAV010000266.1 Protein Homology CDS 26058 26267 . + 0 ID=cds-WP_021160372.1;Parent=gene-LDO49_RS28805;Dbxref=GenBank:WP_021160372.1;Name=WP_021160372.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890522.1;locus_tag=LDO49_RS28805;product=dodecin;protein_id=WP_021160372.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 26490 27419 . + . ID=gene-LDO49_RS28810;Name=LDO49_RS28810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28810;old_locus_tag=BCEP4_580027 NZ_CAJZAV010000266.1 Protein Homology CDS 26490 27419 . + 0 ID=cds-WP_006478550.1;Parent=gene-LDO49_RS28810;Dbxref=GenBank:WP_006478550.1;Name=WP_006478550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698381.1;locus_tag=LDO49_RS28810;product=LysR substrate-binding domain-containing protein;protein_id=WP_006478550.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 27564 28976 . - . ID=gene-LDO49_RS28815;Name=LDO49_RS28815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28815;old_locus_tag=BCEP4_580028 NZ_CAJZAV010000266.1 Protein Homology CDS 27564 28976 . - 0 ID=cds-WP_059490025.1;Parent=gene-LDO49_RS28815;Dbxref=GenBank:WP_059490025.1;Name=WP_059490025.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754392.1;locus_tag=LDO49_RS28815;product=8-oxoguanine deaminase;protein_id=WP_059490025.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 29495 29848 . + . ID=gene-LDO49_RS28820;Name=uraH;gbkey=Gene;gene=uraH;gene_biotype=protein_coding;locus_tag=LDO49_RS28820;old_locus_tag=BCEP4_580030 NZ_CAJZAV010000266.1 Protein Homology CDS 29495 29848 . + 0 ID=cds-WP_011657188.1;Parent=gene-LDO49_RS28820;Dbxref=GenBank:WP_011657188.1;Name=WP_011657188.1;Ontology_term=GO:0006144,GO:0033971;gbkey=CDS;gene=uraH;go_function=hydroxyisourate hydrolase activity|0033971||IEA;go_process=purine nucleobase metabolic process|0006144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495593.1;locus_tag=LDO49_RS28820;product=hydroxyisourate hydrolase;protein_id=WP_011657188.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 29901 31094 . + . ID=gene-LDO49_RS28825;Name=LDO49_RS28825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28825;old_locus_tag=BCEP4_580031 NZ_CAJZAV010000266.1 Protein Homology CDS 29901 31094 . + 0 ID=cds-WP_021160368.1;Parent=gene-LDO49_RS28825;Dbxref=GenBank:WP_021160368.1;Name=WP_021160368.1;Ontology_term=GO:0009055,GO:0020037,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521221.1;locus_tag=LDO49_RS28825;product=urate hydroxylase PuuD;protein_id=WP_021160368.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 31199 31609 . - . ID=gene-LDO49_RS28830;Name=LDO49_RS28830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28830;old_locus_tag=BCEP4_580032 NZ_CAJZAV010000266.1 Protein Homology CDS 31199 31609 . - 0 ID=cds-WP_059587807.1;Parent=gene-LDO49_RS28830;Dbxref=GenBank:WP_059587807.1;Name=WP_059587807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352403.1;locus_tag=LDO49_RS28830;product=ACT domain-containing protein;protein_id=WP_059587807.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 31686 32606 . - . ID=gene-LDO49_RS28835;Name=LDO49_RS28835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28835;old_locus_tag=BCEP4_580033 NZ_CAJZAV010000266.1 Protein Homology CDS 31686 32606 . - 0 ID=cds-WP_175894833.1;Parent=gene-LDO49_RS28835;Dbxref=GenBank:WP_175894833.1;Name=WP_175894833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352404.1;locus_tag=LDO49_RS28835;product=LysR substrate-binding domain-containing protein;protein_id=WP_175894833.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 32741 33556 . + . ID=gene-LDO49_RS28840;Name=LDO49_RS28840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28840;old_locus_tag=BCEP4_580034 NZ_CAJZAV010000266.1 Protein Homology CDS 32741 33556 . + 0 ID=cds-WP_060158214.1;Parent=gene-LDO49_RS28840;Dbxref=GenBank:WP_060158214.1;Name=WP_060158214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352405.1;locus_tag=LDO49_RS28840;product=aminotransferase class IV family protein;protein_id=WP_060158214.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 33583 33987 . - . ID=gene-LDO49_RS28845;Name=LDO49_RS28845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28845;old_locus_tag=BCEP4_580035 NZ_CAJZAV010000266.1 Protein Homology CDS 33583 33987 . - 0 ID=cds-WP_224052618.1;Parent=gene-LDO49_RS28845;Dbxref=GenBank:WP_224052618.1;Name=WP_224052618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006223096.1;locus_tag=LDO49_RS28845;product=RidA family protein;protein_id=WP_224052618.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 34140 35105 . + . ID=gene-LDO49_RS28850;Name=LDO49_RS28850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28850;old_locus_tag=BCEP4_580036 NZ_CAJZAV010000266.1 Protein Homology CDS 34140 35105 . + 0 ID=cds-WP_224052619.1;Parent=gene-LDO49_RS28850;Dbxref=GenBank:WP_224052619.1;Name=WP_224052619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352407.1;locus_tag=LDO49_RS28850;product=LysR family transcriptional regulator;protein_id=WP_224052619.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 35192 35704 . - . ID=gene-LDO49_RS28855;Name=LDO49_RS28855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28855;old_locus_tag=BCEP4_580037 NZ_CAJZAV010000266.1 Protein Homology CDS 35192 35704 . - 0 ID=cds-WP_021160363.1;Parent=gene-LDO49_RS28855;Dbxref=GenBank:WP_021160363.1;Name=WP_021160363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413644.1;locus_tag=LDO49_RS28855;product=ureidoglycolate lyase;protein_id=WP_021160363.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 35701 36714 . - . ID=gene-LDO49_RS28860;Name=alc;gbkey=Gene;gene=alc;gene_biotype=protein_coding;locus_tag=LDO49_RS28860;old_locus_tag=BCEP4_580038 NZ_CAJZAV010000266.1 Protein Homology CDS 35701 36714 . - 0 ID=cds-WP_021160362.1;Parent=gene-LDO49_RS28860;Dbxref=GenBank:WP_021160362.1;Name=WP_021160362.1;Ontology_term=GO:0000256,GO:0004037;gbkey=CDS;gene=alc;go_function=allantoicase activity|0004037||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909169.1;locus_tag=LDO49_RS28860;product=allantoicase;protein_id=WP_021160362.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 36777 37298 . - . ID=gene-LDO49_RS28865;Name=uraD;gbkey=Gene;gene=uraD;gene_biotype=protein_coding;locus_tag=LDO49_RS28865;old_locus_tag=BCEP4_580039 NZ_CAJZAV010000266.1 Protein Homology CDS 36777 37298 . - 0 ID=cds-WP_021160361.1;Parent=gene-LDO49_RS28865;Dbxref=GenBank:WP_021160361.1;Name=WP_021160361.1;Ontology_term=GO:0000255;gbkey=CDS;gene=uraD;go_process=allantoin metabolic process|0000255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364104.1;locus_tag=LDO49_RS28865;product=2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase;protein_id=WP_021160361.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 37295 38248 . - . ID=gene-LDO49_RS28870;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;locus_tag=LDO49_RS28870;old_locus_tag=BCEP4_580040 NZ_CAJZAV010000266.1 Protein Homology CDS 37295 38248 . - 0 ID=cds-WP_027787128.1;Parent=gene-LDO49_RS28870;Dbxref=GenBank:WP_027787128.1;Name=WP_027787128.1;Ontology_term=GO:0000256,GO:0016810;gbkey=CDS;gene=puuE;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407670.1;locus_tag=LDO49_RS28870;product=allantoinase PuuE;protein_id=WP_027787128.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 38397 39188 . - . ID=gene-LDO49_RS28875;Name=LDO49_RS28875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28875;old_locus_tag=BCEP4_580041 NZ_CAJZAV010000266.1 Protein Homology CDS 38397 39188 . - 0 ID=cds-WP_021160359.1;Parent=gene-LDO49_RS28875;Dbxref=GenBank:WP_021160359.1;Name=WP_021160359.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490202.1;locus_tag=LDO49_RS28875;product=aspartate/glutamate racemase family protein;protein_id=WP_021160359.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 39199 40683 . - . ID=gene-LDO49_RS28880;Name=LDO49_RS28880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28880;old_locus_tag=BCEP4_580042 NZ_CAJZAV010000266.1 Protein Homology CDS 39199 40683 . - 0 ID=cds-WP_224052620.1;Parent=gene-LDO49_RS28880;Dbxref=GenBank:WP_224052620.1;Name=WP_224052620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549579.1;locus_tag=LDO49_RS28880;product=NCS1 family nucleobase:cation symporter-1;protein_id=WP_224052620.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 40833 41537 . - . ID=gene-LDO49_RS28885;Name=LDO49_RS28885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28885;old_locus_tag=BCEP4_580043 NZ_CAJZAV010000266.1 Protein Homology CDS 40833 41537 . - 0 ID=cds-WP_048020953.1;Parent=gene-LDO49_RS28885;Dbxref=GenBank:WP_048020953.1;Name=WP_048020953.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364108.1;locus_tag=LDO49_RS28885;product=GntR family transcriptional regulator;protein_id=WP_048020953.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 41845 42783 . - . ID=gene-LDO49_RS28890;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=LDO49_RS28890;old_locus_tag=BCEP4_580044 NZ_CAJZAV010000266.1 Protein Homology CDS 41845 42783 . - 0 ID=cds-WP_224052621.1;Parent=gene-LDO49_RS28890;Dbxref=GenBank:WP_224052621.1;Name=WP_224052621.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549577.1;locus_tag=LDO49_RS28890;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_224052621.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 42884 43480 . - . ID=gene-LDO49_RS28895;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=LDO49_RS28895;old_locus_tag=BCEP4_580045 NZ_CAJZAV010000266.1 Protein Homology CDS 42884 43480 . - 0 ID=cds-WP_224052622.1;Parent=gene-LDO49_RS28895;Dbxref=GenBank:WP_224052622.1;Name=WP_224052622.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402694.1;locus_tag=LDO49_RS28895;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_224052622.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 43477 43878 . - . ID=gene-LDO49_RS28900;Name=LDO49_RS28900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28900;old_locus_tag=BCEP4_580046 NZ_CAJZAV010000266.1 Protein Homology CDS 43477 43878 . - 0 ID=cds-WP_006478536.1;Parent=gene-LDO49_RS28900;Dbxref=GenBank:WP_006478536.1;Name=WP_006478536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193068.1;locus_tag=LDO49_RS28900;product=DnaJ family domain-containing protein;protein_id=WP_006478536.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 44157 45386 . - . ID=gene-LDO49_RS28905;Name=LDO49_RS28905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28905;old_locus_tag=BCEP4_580047 NZ_CAJZAV010000266.1 Protein Homology CDS 44157 45386 . - 0 ID=cds-WP_224052623.1;Parent=gene-LDO49_RS28905;Dbxref=GenBank:WP_224052623.1;Name=WP_224052623.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413631.1;locus_tag=LDO49_RS28905;product=MFS transporter;protein_id=WP_224052623.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 45711 46481 . + . ID=gene-LDO49_RS28910;Name=LDO49_RS28910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28910;old_locus_tag=BCEP4_580048 NZ_CAJZAV010000266.1 Protein Homology CDS 45711 46481 . + 0 ID=cds-WP_224052624.1;Parent=gene-LDO49_RS28910;Dbxref=GenBank:WP_224052624.1;Name=WP_224052624.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413630.1;locus_tag=LDO49_RS28910;product=GntR family transcriptional regulator;protein_id=WP_224052624.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 46478 48217 . + . ID=gene-LDO49_RS28915;Name=LDO49_RS28915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28915;old_locus_tag=BCEP4_580049 NZ_CAJZAV010000266.1 Protein Homology CDS 46478 48217 . + 0 ID=cds-WP_224052625.1;Parent=gene-LDO49_RS28915;Dbxref=GenBank:WP_224052625.1;Name=WP_224052625.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411180.1;locus_tag=LDO49_RS28915;product=fumarate reductase/succinate dehydrogenase flavoprotein subunit;protein_id=WP_224052625.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 48229 48474 . + . ID=gene-LDO49_RS28920;Name=LDO49_RS28920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28920;old_locus_tag=BCEP4_580050 NZ_CAJZAV010000266.1 Protein Homology CDS 48229 48474 . + 0 ID=cds-WP_006764074.1;Parent=gene-LDO49_RS28920;Dbxref=GenBank:WP_006764074.1;Name=WP_006764074.1;Ontology_term=GO:0008270,GO:0009055,GO:0051539;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490846.1;locus_tag=LDO49_RS28920;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_006764074.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq pseudogene 48650 48808 . + . ID=gene-LDO49_RS37640;Name=LDO49_RS37640;end_range=48808,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37640;partial=true;pseudo=true NZ_CAJZAV010000266.1 Protein Homology CDS 48650 48808 . + 0 ID=cds-LDO49_RS37640;Parent=gene-LDO49_RS37640;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=48808,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025030.6;locus_tag=LDO49_RS37640;partial=true;product=HEAT repeat domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 48839 49576 . + . ID=gene-LDO49_RS37230;Name=LDO49_RS37230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37230;old_locus_tag=BCEP4_580052 NZ_CAJZAV010000266.1 Protein Homology CDS 48839 49576 . + 0 ID=cds-WP_372585876.1;Parent=gene-LDO49_RS37230;Dbxref=GenBank:WP_372585876.1;Name=WP_372585876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660603.1;locus_tag=LDO49_RS37230;product=HEAT repeat domain-containing protein;protein_id=WP_372585876.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 49613 50329 . - . ID=gene-LDO49_RS28935;Name=LDO49_RS28935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28935;old_locus_tag=BCEP4_580053 NZ_CAJZAV010000266.1 Protein Homology CDS 49613 50329 . - 0 ID=cds-WP_021157893.1;Parent=gene-LDO49_RS28935;Dbxref=GenBank:WP_021157893.1;Name=WP_021157893.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349639.1;locus_tag=LDO49_RS28935;product=DJ-1/PfpI family protein;protein_id=WP_021157893.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 50413 51345 . + . ID=gene-LDO49_RS28940;Name=LDO49_RS28940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28940;old_locus_tag=BCEP4_580054 NZ_CAJZAV010000266.1 Protein Homology CDS 50413 51345 . + 0 ID=cds-WP_060148279.1;Parent=gene-LDO49_RS28940;Dbxref=GenBank:WP_060148279.1;Name=WP_060148279.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349640.1;locus_tag=LDO49_RS28940;product=GlxA family transcriptional regulator;protein_id=WP_060148279.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 51601 51924 . + . ID=gene-LDO49_RS28945;Name=LDO49_RS28945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28945;old_locus_tag=BCEP4_580055 NZ_CAJZAV010000266.1 Protein Homology CDS 51601 51924 . + 0 ID=cds-WP_048028441.1;Parent=gene-LDO49_RS28945;Dbxref=GenBank:WP_048028441.1;Name=WP_048028441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481332.1;locus_tag=LDO49_RS28945;product=TfoX/Sxy family protein;protein_id=WP_048028441.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 52014 52922 . + . ID=gene-LDO49_RS28950;Name=LDO49_RS28950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28950;old_locus_tag=BCEP4_580056 NZ_CAJZAV010000266.1 Protein Homology CDS 52014 52922 . + 0 ID=cds-WP_021157896.1;Parent=gene-LDO49_RS28950;Dbxref=GenBank:WP_021157896.1;Name=WP_021157896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481331.1;locus_tag=LDO49_RS28950;product=hypothetical protein;protein_id=WP_021157896.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq pseudogene 52953 53240 . - . ID=gene-LDO49_RS28955;Name=LDO49_RS28955;end_range=53240,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS28955;old_locus_tag=BCEP4_580057;partial=true;pseudo=true NZ_CAJZAV010000266.1 Protein Homology CDS 52953 53240 . - 0 ID=cds-LDO49_RS28955;Parent=gene-LDO49_RS28955;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=53240,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545635.1;locus_tag=LDO49_RS28955;partial=true;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 53345 55522 . - . ID=gene-LDO49_RS28960;Name=LDO49_RS28960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28960;old_locus_tag=BCEP4_580058 NZ_CAJZAV010000266.1 Protein Homology CDS 53345 55522 . - 0 ID=cds-WP_060148282.1;Parent=gene-LDO49_RS28960;Dbxref=GenBank:WP_060148282.1;Name=WP_060148282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349643.1;locus_tag=LDO49_RS28960;product=DUF4132 domain-containing protein;protein_id=WP_060148282.1;transl_table=11 NZ_CAJZAV010000266.1 RefSeq gene 56076 56680 . + . ID=gene-LDO49_RS28965;Name=LDO49_RS28965;end_range=56680,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28965;partial=true NZ_CAJZAV010000266.1 Protein Homology CDS 56076 56680 . + 0 ID=cds-WP_224052628.1;Parent=gene-LDO49_RS28965;Dbxref=GenBank:WP_224052628.1;Name=WP_224052628.1;Ontology_term=GO:0009058,GO:0030170;end_range=56680,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481292.1;locus_tag=LDO49_RS28965;partial=true;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_224052628.1;transl_table=11 ##sequence-region NZ_CAJZAV010000267.1 1 21559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000267.1 RefSeq region 1 21559 . + . ID=NZ_CAJZAV010000267.1:1..21559;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_59 NZ_CAJZAV010000267.1 RefSeq pseudogene 1 1062 . - . ID=gene-LDO49_RS28970;Name=LDO49_RS28970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS28970;old_locus_tag=BCEP4_590002;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000267.1 Protein Homology CDS 1 1062 . - 0 ID=cds-LDO49_RS28970;Parent=gene-LDO49_RS28970;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_238466270.1;locus_tag=LDO49_RS28970;partial=true;product=IS256 family transposase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000267.1 RefSeq gene 1448 1804 . - . ID=gene-LDO49_RS28975;Name=LDO49_RS28975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS28975;old_locus_tag=BCEP4_590004 NZ_CAJZAV010000267.1 GeneMarkS-2+ CDS 1448 1804 . - 0 ID=cds-WP_224052629.1;Parent=gene-LDO49_RS28975;Dbxref=GenBank:WP_224052629.1;Name=WP_224052629.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS28975;product=hypothetical protein;protein_id=WP_224052629.1;transl_table=11 NZ_CAJZAV010000267.1 RefSeq pseudogene 2343 2702 . - . ID=gene-LDO49_RS28980;Name=LDO49_RS28980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS28980;old_locus_tag=BCEP4_590007;pseudo=true NZ_CAJZAV010000267.1 Protein Homology CDS 2343 2702 . - 0 ID=cds-LDO49_RS28980;Parent=gene-LDO49_RS28980;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893756.1;locus_tag=LDO49_RS28980;product=DUF6277 family protein;pseudo=true;transl_table=11 NZ_CAJZAV010000267.1 RefSeq gene 2763 6233 . - . ID=gene-LDO49_RS28985;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=LDO49_RS28985;old_locus_tag=BCEP4_590008 NZ_CAJZAV010000267.1 Protein Homology CDS 2763 6233 . - 0 ID=cds-WP_224052630.1;Parent=gene-LDO49_RS28985;Dbxref=GenBank:WP_224052630.1;Name=WP_224052630.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190265.1;locus_tag=LDO49_RS28985;product=type VI secretion system membrane subunit TssM;protein_id=WP_224052630.1;transl_table=11 NZ_CAJZAV010000267.1 RefSeq gene 6236 7759 . - . ID=gene-LDO49_RS28990;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=LDO49_RS28990;old_locus_tag=BCEP4_590009 NZ_CAJZAV010000267.1 Protein Homology CDS 6236 7759 . - 0 ID=cds-WP_372585877.1;Parent=gene-LDO49_RS28990;Dbxref=GenBank:WP_372585877.1;Name=WP_372585877.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530043.1;locus_tag=LDO49_RS28990;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_372585877.1;transl_table=11 NZ_CAJZAV010000267.1 RefSeq gene 7785 9146 . - . ID=gene-LDO49_RS28995;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LDO49_RS28995;old_locus_tag=BCEP4_590010 NZ_CAJZAV010000267.1 Protein Homology CDS 7785 9146 . - 0 ID=cds-WP_060072199.1;Parent=gene-LDO49_RS28995;Dbxref=GenBank:WP_060072199.1;Name=WP_060072199.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108213.1;locus_tag=LDO49_RS28995;product=type VI secretion system baseplate subunit TssK;protein_id=WP_060072199.1;transl_table=11 NZ_CAJZAV010000267.1 RefSeq gene 9143 9712 . - . ID=gene-LDO49_RS29000;Name=LDO49_RS29000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29000;old_locus_tag=BCEP4_590011 NZ_CAJZAV010000267.1 Protein Homology CDS 9143 9712 . - 0 ID=cds-WP_224052631.1;Parent=gene-LDO49_RS29000;Dbxref=GenBank:WP_224052631.1;Name=WP_224052631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331442.1;locus_tag=LDO49_RS29000;product=type VI secretion lipoprotein TssJ;protein_id=WP_224052631.1;transl_table=11 NZ_CAJZAV010000267.1 RefSeq gene 9712 10539 . - . ID=gene-LDO49_RS29005;Name=LDO49_RS29005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29005;old_locus_tag=BCEP4_590012 NZ_CAJZAV010000267.1 Protein Homology CDS 9712 10539 . - 0 ID=cds-WP_372585878.1;Parent=gene-LDO49_RS29005;Dbxref=GenBank:WP_372585878.1;Name=WP_372585878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331435.1;locus_tag=LDO49_RS29005;product=DUF4150 domain-containing protein;protein_id=WP_372585878.1;transl_table=11 NZ_CAJZAV010000267.1 RefSeq pseudogene 10606 13176 . - . ID=gene-LDO49_RS29010;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=pseudogene;gene_synonym=clpV;locus_tag=LDO49_RS29010;old_locus_tag=BCEP4_590013;partial=true;pseudo=true;start_range=.,10606 NZ_CAJZAV010000267.1 Protein Homology CDS 10606 13176 . - 0 ID=cds-LDO49_RS29010;Parent=gene-LDO49_RS29010;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525547.1;locus_tag=LDO49_RS29010;partial=true;product=type VI secretion system ATPase TssH;pseudo=true;start_range=.,10606;transl_table=11 NZ_CAJZAV010000267.1 RefSeq gene 13173 14159 . - . ID=gene-LDO49_RS29015;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LDO49_RS29015;old_locus_tag=BCEP4_590014 NZ_CAJZAV010000267.1 Protein Homology CDS 13173 14159 . - 0 ID=cds-WP_124844513.1;Parent=gene-LDO49_RS29015;Dbxref=GenBank:WP_124844513.1;Name=WP_124844513.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331433.1;locus_tag=LDO49_RS29015;product=type VI secretion system baseplate subunit TssG;protein_id=WP_124844513.1;transl_table=11 NZ_CAJZAV010000267.1 RefSeq gene 14156 16018 . - . ID=gene-LDO49_RS29020;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LDO49_RS29020;old_locus_tag=BCEP4_590015 NZ_CAJZAV010000267.1 Protein Homology CDS 14156 16018 . - 0 ID=cds-WP_060072217.1;Parent=gene-LDO49_RS29020;Dbxref=GenBank:WP_060072217.1;Name=WP_060072217.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196180.1;locus_tag=LDO49_RS29020;product=type VI secretion system baseplate subunit TssF;protein_id=WP_060072217.1;transl_table=11 NZ_CAJZAV010000267.1 RefSeq gene 16035 16463 . - . ID=gene-LDO49_RS29025;Name=LDO49_RS29025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29025 NZ_CAJZAV010000267.1 Protein Homology CDS 16035 16463 . - 0 ID=cds-WP_081067249.1;Parent=gene-LDO49_RS29025;Dbxref=GenBank:WP_081067249.1;Name=WP_081067249.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016829.6;locus_tag=LDO49_RS29025;product=GPW/gp25 family protein;protein_id=WP_081067249.1;transl_table=11 NZ_CAJZAV010000267.1 RefSeq gene 16536 17063 . - . ID=gene-LDO49_RS29030;Name=LDO49_RS29030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29030;old_locus_tag=BCEP4_590017 NZ_CAJZAV010000267.1 Protein Homology CDS 16536 17063 . - 0 ID=cds-WP_060072206.1;Parent=gene-LDO49_RS29030;Dbxref=GenBank:WP_060072206.1;Name=WP_060072206.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530039.1;locus_tag=LDO49_RS29030;product=Hcp family type VI secretion system effector;protein_id=WP_060072206.1;transl_table=11 NZ_CAJZAV010000267.1 RefSeq gene 17213 18724 . - . ID=gene-LDO49_RS29035;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=LDO49_RS29035;old_locus_tag=BCEP4_590018 NZ_CAJZAV010000267.1 Protein Homology CDS 17213 18724 . - 0 ID=cds-WP_081067250.1;Parent=gene-LDO49_RS29035;Dbxref=GenBank:WP_081067250.1;Name=WP_081067250.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007831855.1;locus_tag=LDO49_RS29035;product=type VI secretion system contractile sheath large subunit;protein_id=WP_081067250.1;transl_table=11 NZ_CAJZAV010000267.1 RefSeq gene 18727 19263 . - . ID=gene-LDO49_RS29040;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=LDO49_RS29040;old_locus_tag=BCEP4_590019 NZ_CAJZAV010000267.1 Protein Homology CDS 18727 19263 . - 0 ID=cds-WP_060072210.1;Parent=gene-LDO49_RS29040;Dbxref=GenBank:WP_060072210.1;Name=WP_060072210.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014752397.1;locus_tag=LDO49_RS29040;product=type VI secretion system contractile sheath small subunit;protein_id=WP_060072210.1;transl_table=11 NZ_CAJZAV010000267.1 RefSeq gene 19300 20187 . - . ID=gene-LDO49_RS29045;Name=LDO49_RS29045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29045;old_locus_tag=BCEP4_590021 NZ_CAJZAV010000267.1 Protein Homology CDS 19300 20187 . - 0 ID=cds-WP_081067251.1;Parent=gene-LDO49_RS29045;Dbxref=GenBank:WP_081067251.1;Name=WP_081067251.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018516.6;locus_tag=LDO49_RS29045;product=type VI secretion system ImpA family N-terminal domain-containing protein;protein_id=WP_081067251.1;transl_table=11 NZ_CAJZAV010000267.1 RefSeq pseudogene 21231 21458 . - . ID=gene-LDO49_RS29050;Name=LDO49_RS29050;end_range=21458,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS29050;old_locus_tag=BCEP4_590024;partial=true;pseudo=true NZ_CAJZAV010000267.1 Protein Homology CDS 21231 21458 . - 0 ID=cds-LDO49_RS29050;Parent=gene-LDO49_RS29050;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=21458,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544710.1;locus_tag=LDO49_RS29050;partial=true;product=IS110 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000268.1 1 131690 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000268.1 RefSeq region 1 131690 . + . ID=NZ_CAJZAV010000268.1:1..131690;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_6 NZ_CAJZAV010000268.1 RefSeq gene 1 1674 . - . ID=gene-LDO49_RS29055;Name=LDO49_RS29055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29055;old_locus_tag=BCEP4_60001 NZ_CAJZAV010000268.1 Protein Homology CDS 1 1674 . - 0 ID=cds-WP_060151308.1;Parent=gene-LDO49_RS29055;Dbxref=GenBank:WP_060151308.1;Name=WP_060151308.1;Ontology_term=GO:0022900,GO:0004174,GO:0046872,GO:0051539;gbkey=CDS;go_function=electron-transferring-flavoprotein dehydrogenase activity|0004174||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015003297.1;locus_tag=LDO49_RS29055;product=electron transfer flavoprotein-ubiquinone oxidoreductase;protein_id=WP_060151308.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 1853 2635 . + . ID=gene-LDO49_RS29060;Name=LDO49_RS29060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29060;old_locus_tag=BCEP4_60002 NZ_CAJZAV010000268.1 Protein Homology CDS 1853 2635 . + 0 ID=cds-WP_011351770.1;Parent=gene-LDO49_RS29060;Dbxref=GenBank:WP_011351770.1;Name=WP_011351770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602148.1;locus_tag=LDO49_RS29060;product=SDR family oxidoreductase;protein_id=WP_011351770.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 2668 3108 . + . ID=gene-LDO49_RS29065;Name=LDO49_RS29065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29065;old_locus_tag=BCEP4_60003 NZ_CAJZAV010000268.1 Protein Homology CDS 2668 3108 . + 0 ID=cds-WP_027787712.1;Parent=gene-LDO49_RS29065;Dbxref=GenBank:WP_027787712.1;Name=WP_027787712.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545237.1;locus_tag=LDO49_RS29065;product=acyl-CoA thioesterase;protein_id=WP_027787712.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 3214 3759 . - . ID=gene-LDO49_RS29070;Name=LDO49_RS29070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29070;old_locus_tag=BCEP4_60004 NZ_CAJZAV010000268.1 Protein Homology CDS 3214 3759 . - 0 ID=cds-WP_021162430.1;Parent=gene-LDO49_RS29070;Dbxref=GenBank:WP_021162430.1;Name=WP_021162430.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026504.1;locus_tag=LDO49_RS29070;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_021162430.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 3982 4686 . + . ID=gene-LDO49_RS29075;Name=LDO49_RS29075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29075;old_locus_tag=BCEP4_60005 NZ_CAJZAV010000268.1 Protein Homology CDS 3982 4686 . + 0 ID=cds-WP_021162428.1;Parent=gene-LDO49_RS29075;Dbxref=GenBank:WP_021162428.1;Name=WP_021162428.1;Ontology_term=GO:0008410;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891596.1;locus_tag=LDO49_RS29075;product=CoA transferase subunit A;protein_id=WP_021162428.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 4688 5329 . + . ID=gene-LDO49_RS29080;Name=LDO49_RS29080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29080;old_locus_tag=BCEP4_60006 NZ_CAJZAV010000268.1 Protein Homology CDS 4688 5329 . + 0 ID=cds-WP_021162427.1;Parent=gene-LDO49_RS29080;Dbxref=GenBank:WP_021162427.1;Name=WP_021162427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402088.1;locus_tag=LDO49_RS29080;product=CoA transferase subunit B;protein_id=WP_021162427.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 5407 6339 . - . ID=gene-LDO49_RS29085;Name=LDO49_RS29085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29085;old_locus_tag=BCEP4_60007 NZ_CAJZAV010000268.1 Protein Homology CDS 5407 6339 . - 0 ID=cds-WP_059496160.1;Parent=gene-LDO49_RS29085;Dbxref=GenBank:WP_059496160.1;Name=WP_059496160.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332569.1;locus_tag=LDO49_RS29085;product=LysR family transcriptional regulator;protein_id=WP_059496160.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 6432 7316 . + . ID=gene-LDO49_RS29090;Name=LDO49_RS29090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29090;old_locus_tag=BCEP4_60008 NZ_CAJZAV010000268.1 Protein Homology CDS 6432 7316 . + 0 ID=cds-WP_059484311.1;Parent=gene-LDO49_RS29090;Dbxref=GenBank:WP_059484311.1;Name=WP_059484311.1;Ontology_term=GO:0055085,GO:0005215,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697233.1;locus_tag=LDO49_RS29090;product=EamA family transporter;protein_id=WP_059484311.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 7603 8499 . + . ID=gene-LDO49_RS29095;Name=LDO49_RS29095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29095;old_locus_tag=BCEP4_60009 NZ_CAJZAV010000268.1 Protein Homology CDS 7603 8499 . + 0 ID=cds-WP_042977026.1;Parent=gene-LDO49_RS29095;Dbxref=GenBank:WP_042977026.1;Name=WP_042977026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492553.1;locus_tag=LDO49_RS29095;product=alpha/beta fold hydrolase;protein_id=WP_042977026.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 8580 8933 . + . ID=gene-LDO49_RS29100;Name=LDO49_RS29100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29100;old_locus_tag=BCEP4_60011 NZ_CAJZAV010000268.1 Protein Homology CDS 8580 8933 . + 0 ID=cds-WP_021162422.1;Parent=gene-LDO49_RS29100;Dbxref=GenBank:WP_021162422.1;Name=WP_021162422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486103.1;locus_tag=LDO49_RS29100;product=RidA family protein;protein_id=WP_021162422.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 8978 11212 . + . ID=gene-LDO49_RS29105;Name=LDO49_RS29105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29105;old_locus_tag=BCEP4_60010 NZ_CAJZAV010000268.1 Protein Homology CDS 8978 11212 . + 0 ID=cds-WP_021162421.1;Parent=gene-LDO49_RS29105;Dbxref=GenBank:WP_021162421.1;Name=WP_021162421.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402085.1;locus_tag=LDO49_RS29105;product=RelA/SpoT family protein;protein_id=WP_021162421.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 11300 11376 . + . ID=gene-LDO49_RS29110;Name=LDO49_RS29110;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS29110;old_locus_tag=BCEP4_TRNA2 NZ_CAJZAV010000268.1 tRNAscan-SE tRNA 11300 11376 . + . ID=rna-LDO49_RS29110;Parent=gene-LDO49_RS29110;anticodon=(pos:11334..11336);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29110;product=tRNA-Val NZ_CAJZAV010000268.1 tRNAscan-SE exon 11300 11376 . + . ID=exon-LDO49_RS29110-1;Parent=rna-LDO49_RS29110;anticodon=(pos:11334..11336);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29110;product=tRNA-Val NZ_CAJZAV010000268.1 RefSeq gene 11648 13555 . + . ID=gene-LDO49_RS29115;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=LDO49_RS29115;old_locus_tag=BCEP4_60012 NZ_CAJZAV010000268.1 Protein Homology CDS 11648 13555 . + 0 ID=cds-WP_060074038.1;Parent=gene-LDO49_RS29115;Dbxref=GenBank:WP_060074038.1;Name=WP_060074038.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191232.1;locus_tag=LDO49_RS29115;product=threonine--tRNA ligase;protein_id=WP_060074038.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 13605 14129 . + . ID=gene-LDO49_RS29120;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=LDO49_RS29120 NZ_CAJZAV010000268.1 Protein Homology CDS 13605 14129 . + 0 ID=cds-WP_071734130.1;Parent=gene-LDO49_RS29120;Dbxref=GenBank:WP_071734130.1;Name=WP_071734130.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012435921.1;locus_tag=LDO49_RS29120;product=translation initiation factor IF-3;protein_id=WP_071734130.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 14319 14516 . + . ID=gene-LDO49_RS29125;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=LDO49_RS29125;old_locus_tag=BCEP4_60014 NZ_CAJZAV010000268.1 Protein Homology CDS 14319 14516 . + 0 ID=cds-WP_004191477.1;Parent=gene-LDO49_RS29125;Dbxref=GenBank:WP_004191477.1;Name=WP_004191477.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012433738.1;locus_tag=LDO49_RS29125;product=50S ribosomal protein L35;protein_id=WP_004191477.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 14547 14906 . + . ID=gene-LDO49_RS29130;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=LDO49_RS29130;old_locus_tag=BCEP4_60015 NZ_CAJZAV010000268.1 Protein Homology CDS 14547 14906 . + 0 ID=cds-WP_004192938.1;Parent=gene-LDO49_RS29130;Dbxref=GenBank:WP_004192938.1;Name=WP_004192938.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192938.1;locus_tag=LDO49_RS29130;product=50S ribosomal protein L20;protein_id=WP_004192938.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 15055 16068 . + . ID=gene-LDO49_RS29135;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=LDO49_RS29135;old_locus_tag=BCEP4_60016 NZ_CAJZAV010000268.1 Protein Homology CDS 15055 16068 . + 0 ID=cds-WP_021162419.1;Parent=gene-LDO49_RS29135;Dbxref=GenBank:WP_021162419.1;Name=WP_021162419.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753318.1;locus_tag=LDO49_RS29135;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_021162419.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 16165 18594 . + . ID=gene-LDO49_RS29140;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=LDO49_RS29140;old_locus_tag=BCEP4_60017 NZ_CAJZAV010000268.1 Protein Homology CDS 16165 18594 . + 0 ID=cds-WP_060074041.1;Parent=gene-LDO49_RS29140;Dbxref=GenBank:WP_060074041.1;Name=WP_060074041.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115709.1;locus_tag=LDO49_RS29140;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_060074041.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 18665 19051 . + . ID=gene-LDO49_RS29145;Name=LDO49_RS29145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29145;old_locus_tag=BCEP4_60018 NZ_CAJZAV010000268.1 Protein Homology CDS 18665 19051 . + 0 ID=cds-WP_006486093.1;Parent=gene-LDO49_RS29145;Dbxref=GenBank:WP_006486093.1;Name=WP_006486093.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884557.1;locus_tag=LDO49_RS29145;product=integration host factor subunit alpha;protein_id=WP_006486093.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 19114 19527 . + . ID=gene-LDO49_RS29150;Name=LDO49_RS29150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29150;old_locus_tag=BCEP4_60019 NZ_CAJZAV010000268.1 Protein Homology CDS 19114 19527 . + 0 ID=cds-WP_027787702.1;Parent=gene-LDO49_RS29150;Dbxref=GenBank:WP_027787702.1;Name=WP_027787702.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526841.1;locus_tag=LDO49_RS29150;product=MerR family transcriptional regulator;protein_id=WP_027787702.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 19609 21819 . - . ID=gene-LDO49_RS29155;Name=LDO49_RS29155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29155;old_locus_tag=BCEP4_60020 NZ_CAJZAV010000268.1 Protein Homology CDS 19609 21819 . - 0 ID=cds-WP_124842851.1;Parent=gene-LDO49_RS29155;Dbxref=GenBank:WP_124842851.1;Name=WP_124842851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363734.1;locus_tag=LDO49_RS29155;product=hypothetical protein;protein_id=WP_124842851.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 22165 23025 . - . ID=gene-LDO49_RS29160;Name=LDO49_RS29160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29160;old_locus_tag=BCEP4_60021 NZ_CAJZAV010000268.1 Protein Homology CDS 22165 23025 . - 0 ID=cds-WP_308044079.1;Parent=gene-LDO49_RS29160;Dbxref=GenBank:WP_308044079.1;Name=WP_308044079.1;Ontology_term=GO:0004721,GO:0004725;gbkey=CDS;go_function=phosphoprotein phosphatase activity|0004721||IEA,protein tyrosine phosphatase activity|0004725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897231.1;locus_tag=LDO49_RS29160;product=tyrosine-protein phosphatase;protein_id=WP_308044079.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 23378 24091 . + . ID=gene-LDO49_RS29165;Name=LDO49_RS29165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29165;old_locus_tag=BCEP4_60022 NZ_CAJZAV010000268.1 Protein Homology CDS 23378 24091 . + 0 ID=cds-WP_048025582.1;Parent=gene-LDO49_RS29165;Dbxref=GenBank:WP_048025582.1;Name=WP_048025582.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328371.1;locus_tag=LDO49_RS29165;product=class I SAM-dependent methyltransferase;protein_id=WP_048025582.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 24252 24328 . + . ID=gene-LDO49_RS29170;Name=LDO49_RS29170;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS29170;old_locus_tag=BCEP4_TRNA3 NZ_CAJZAV010000268.1 tRNAscan-SE tRNA 24252 24328 . + . ID=rna-LDO49_RS29170;Parent=gene-LDO49_RS29170;anticodon=(pos:24286..24288);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29170;product=tRNA-Pro NZ_CAJZAV010000268.1 tRNAscan-SE exon 24252 24328 . + . ID=exon-LDO49_RS29170-1;Parent=rna-LDO49_RS29170;anticodon=(pos:24286..24288);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29170;product=tRNA-Pro NZ_CAJZAV010000268.1 RefSeq gene 24469 25677 . + . ID=gene-LDO49_RS29175;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=LDO49_RS29175;old_locus_tag=BCEP4_60024 NZ_CAJZAV010000268.1 Protein Homology CDS 24469 25677 . + 0 ID=cds-WP_021162411.1;Parent=gene-LDO49_RS29175;Dbxref=GenBank:WP_021162411.1;Name=WP_021162411.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656681.1;locus_tag=LDO49_RS29175;product=outer membrane protein assembly factor BamC;protein_id=WP_021162411.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 26199 26489 . + . ID=gene-LDO49_RS29180;Name=LDO49_RS29180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29180;old_locus_tag=BCEP4_60025 NZ_CAJZAV010000268.1 Protein Homology CDS 26199 26489 . + 0 ID=cds-WP_021162410.1;Parent=gene-LDO49_RS29180;Dbxref=GenBank:WP_021162410.1;Name=WP_021162410.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495355.1;locus_tag=LDO49_RS29180;product=putative quinol monooxygenase;protein_id=WP_021162410.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 26530 26787 . - . ID=gene-LDO49_RS29185;Name=LDO49_RS29185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29185;old_locus_tag=BCEP4_60026 NZ_CAJZAV010000268.1 Protein Homology CDS 26530 26787 . - 0 ID=cds-WP_021162409.1;Parent=gene-LDO49_RS29185;Dbxref=GenBank:WP_021162409.1;Name=WP_021162409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191628.1;locus_tag=LDO49_RS29185;product=hypothetical protein;protein_id=WP_021162409.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 26923 27201 . - . ID=gene-LDO49_RS29190;Name=LDO49_RS29190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29190;old_locus_tag=BCEP4_60027 NZ_CAJZAV010000268.1 Protein Homology CDS 26923 27201 . - 0 ID=cds-WP_011351789.1;Parent=gene-LDO49_RS29190;Dbxref=GenBank:WP_011351789.1;Name=WP_011351789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521679.1;locus_tag=LDO49_RS29190;product=hypothetical protein;protein_id=WP_011351789.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 27426 28142 . - . ID=gene-LDO49_RS29195;Name=LDO49_RS29195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29195;old_locus_tag=BCEP4_60028 NZ_CAJZAV010000268.1 Protein Homology CDS 27426 28142 . - 0 ID=cds-WP_021162408.1;Parent=gene-LDO49_RS29195;Dbxref=GenBank:WP_021162408.1;Name=WP_021162408.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413752.1;locus_tag=LDO49_RS29195;product=YdcF family protein;protein_id=WP_021162408.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 28300 28617 . + . ID=gene-LDO49_RS29200;Name=LDO49_RS29200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29200;old_locus_tag=BCEP4_60029 NZ_CAJZAV010000268.1 Protein Homology CDS 28300 28617 . + 0 ID=cds-WP_048020764.1;Parent=gene-LDO49_RS29200;Dbxref=GenBank:WP_048020764.1;Name=WP_048020764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332596.1;locus_tag=LDO49_RS29200;product=hypothetical protein;protein_id=WP_048020764.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 28808 29059 . - . ID=gene-LDO49_RS29205;Name=LDO49_RS29205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29205 NZ_CAJZAV010000268.1 Protein Homology CDS 28808 29059 . - 0 ID=cds-WP_060056313.1;Parent=gene-LDO49_RS29205;Dbxref=GenBank:WP_060056313.1;Name=WP_060056313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328376.1;locus_tag=LDO49_RS29205;product=hypothetical protein;protein_id=WP_060056313.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq pseudogene 29257 29652 . - . ID=gene-LDO49_RS29210;Name=LDO49_RS29210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS29210;old_locus_tag=BCEP4_60031;partial=true;pseudo=true;start_range=.,29257 NZ_CAJZAV010000268.1 Protein Homology CDS 29257 29652 . - 0 ID=cds-LDO49_RS29210;Parent=gene-LDO49_RS29210;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603844.1;locus_tag=LDO49_RS29210;partial=true;product=transposase;pseudo=true;start_range=.,29257;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 30083 30985 . + . ID=gene-LDO49_RS29215;Name=LDO49_RS29215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29215;old_locus_tag=BCEP4_60033 NZ_CAJZAV010000268.1 Protein Homology CDS 30083 30985 . + 0 ID=cds-WP_021162406.1;Parent=gene-LDO49_RS29215;Dbxref=GenBank:WP_021162406.1;Name=WP_021162406.1;Ontology_term=GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193481.1;locus_tag=LDO49_RS29215;product=LysR family transcriptional regulator;protein_id=WP_021162406.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 31060 32262 . + . ID=gene-LDO49_RS29220;Name=LDO49_RS29220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29220;old_locus_tag=BCEP4_60034 NZ_CAJZAV010000268.1 Protein Homology CDS 31060 32262 . + 0 ID=cds-WP_060074183.1;Parent=gene-LDO49_RS29220;Dbxref=GenBank:WP_060074183.1;Name=WP_060074183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758861.1;locus_tag=LDO49_RS29220;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_060074183.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 32535 33566 . + . ID=gene-LDO49_RS29225;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=LDO49_RS29225;old_locus_tag=BCEP4_60035 NZ_CAJZAV010000268.1 Protein Homology CDS 32535 33566 . + 0 ID=cds-WP_060074185.1;Parent=gene-LDO49_RS29225;Dbxref=GenBank:WP_060074185.1;Name=WP_060074185.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476168.1;locus_tag=LDO49_RS29225;product=SMC-Scp complex subunit ScpB;protein_id=WP_060074185.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 33627 35384 . + . ID=gene-LDO49_RS29230;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=LDO49_RS29230;old_locus_tag=BCEP4_60036 NZ_CAJZAV010000268.1 Protein Homology CDS 33627 35384 . + 0 ID=cds-WP_059855355.1;Parent=gene-LDO49_RS29230;Dbxref=GenBank:WP_059855355.1;Name=WP_059855355.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328380.1;locus_tag=LDO49_RS29230;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_059855355.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 35843 36301 . + . ID=gene-LDO49_RS29235;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=LDO49_RS29235;old_locus_tag=BCEP4_60038 NZ_CAJZAV010000268.1 Protein Homology CDS 35843 36301 . + 0 ID=cds-WP_014897219.1;Parent=gene-LDO49_RS29235;Dbxref=GenBank:WP_014897219.1;Name=WP_014897219.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402064.1;locus_tag=LDO49_RS29235;product=ribosome maturation factor RimP;protein_id=WP_014897219.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 36301 37776 . + . ID=gene-LDO49_RS29240;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=LDO49_RS29240;old_locus_tag=BCEP4_60039 NZ_CAJZAV010000268.1 Protein Homology CDS 36301 37776 . + 0 ID=cds-WP_006476166.1;Parent=gene-LDO49_RS29240;Dbxref=GenBank:WP_006476166.1;Name=WP_006476166.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012432652.1;locus_tag=LDO49_RS29240;product=transcription termination factor NusA;protein_id=WP_006476166.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 37868 40795 . + . ID=gene-LDO49_RS29245;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=LDO49_RS29245;old_locus_tag=BCEP4_60040 NZ_CAJZAV010000268.1 Protein Homology CDS 37868 40795 . + 0 ID=cds-WP_027787688.1;Parent=gene-LDO49_RS29245;Dbxref=GenBank:WP_027787688.1;Name=WP_027787688.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402062.1;locus_tag=LDO49_RS29245;product=translation initiation factor IF-2;protein_id=WP_027787688.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 40910 41308 . + . ID=gene-LDO49_RS29250;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=LDO49_RS29250;old_locus_tag=BCEP4_60041 NZ_CAJZAV010000268.1 Protein Homology CDS 40910 41308 . + 0 ID=cds-WP_021162402.1;Parent=gene-LDO49_RS29250;Dbxref=GenBank:WP_021162402.1;Name=WP_021162402.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495346.1;locus_tag=LDO49_RS29250;product=30S ribosome-binding factor RbfA;protein_id=WP_021162402.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 41322 42254 . + . ID=gene-LDO49_RS29255;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=LDO49_RS29255;old_locus_tag=BCEP4_60042 NZ_CAJZAV010000268.1 Protein Homology CDS 41322 42254 . + 0 ID=cds-WP_060074187.1;Parent=gene-LDO49_RS29255;Dbxref=GenBank:WP_060074187.1;Name=WP_060074187.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363742.1;locus_tag=LDO49_RS29255;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_060074187.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 42340 43899 . - . ID=gene-LDO49_RS29260;Name=LDO49_RS29260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29260;old_locus_tag=BCEP4_60043 NZ_CAJZAV010000268.1 Protein Homology CDS 42340 43899 . - 0 ID=cds-WP_021162400.1;Parent=gene-LDO49_RS29260;Dbxref=GenBank:WP_021162400.1;Name=WP_021162400.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492561.1;locus_tag=LDO49_RS29260;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_021162400.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 43928 45142 . - . ID=gene-LDO49_RS29265;Name=LDO49_RS29265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29265;old_locus_tag=BCEP4_60044 NZ_CAJZAV010000268.1 Protein Homology CDS 43928 45142 . - 0 ID=cds-WP_060074189.1;Parent=gene-LDO49_RS29265;Dbxref=GenBank:WP_060074189.1;Name=WP_060074189.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476162.1;locus_tag=LDO49_RS29265;product=HlyD family secretion protein;protein_id=WP_060074189.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 45195 46691 . - . ID=gene-LDO49_RS29270;Name=LDO49_RS29270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29270;old_locus_tag=BCEP4_60045 NZ_CAJZAV010000268.1 Protein Homology CDS 45195 46691 . - 0 ID=cds-WP_059496140.1;Parent=gene-LDO49_RS29270;Dbxref=GenBank:WP_059496140.1;Name=WP_059496140.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363745.1;locus_tag=LDO49_RS29270;product=efflux transporter outer membrane subunit;protein_id=WP_059496140.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 46779 47270 . - . ID=gene-LDO49_RS29275;Name=LDO49_RS29275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29275;old_locus_tag=BCEP4_60046 NZ_CAJZAV010000268.1 Protein Homology CDS 46779 47270 . - 0 ID=cds-WP_042977011.1;Parent=gene-LDO49_RS29275;Dbxref=GenBank:WP_042977011.1;Name=WP_042977011.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351804.1;locus_tag=LDO49_RS29275;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_042977011.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 47597 49423 . + . ID=gene-LDO49_RS29280;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=LDO49_RS29280;old_locus_tag=BCEP4_60047 NZ_CAJZAV010000268.1 Protein Homology CDS 47597 49423 . + 0 ID=cds-WP_021162397.1;Parent=gene-LDO49_RS29280;Dbxref=GenBank:WP_021162397.1;Name=WP_021162397.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013588059.1;locus_tag=LDO49_RS29280;product=translational GTPase TypA;protein_id=WP_021162397.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 49741 52605 . + . ID=gene-LDO49_RS29285;Name=LDO49_RS29285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29285;old_locus_tag=BCEP4_60048 NZ_CAJZAV010000268.1 Protein Homology CDS 49741 52605 . + 0 ID=cds-WP_021162396.1;Parent=gene-LDO49_RS29285;Dbxref=GenBank:WP_021162396.1;Name=WP_021162396.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526855.1;locus_tag=LDO49_RS29285;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_021162396.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 52741 54015 . + . ID=gene-LDO49_RS29290;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=LDO49_RS29290;old_locus_tag=BCEP4_60049 NZ_CAJZAV010000268.1 Protein Homology CDS 52741 54015 . + 0 ID=cds-WP_042977010.1;Parent=gene-LDO49_RS29290;Dbxref=GenBank:WP_042977010.1;Name=WP_042977010.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601426.1;locus_tag=LDO49_RS29290;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_042977010.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 54097 55527 . + . ID=gene-LDO49_RS29295;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LDO49_RS29295;old_locus_tag=BCEP4_60050 NZ_CAJZAV010000268.1 Protein Homology CDS 54097 55527 . + 0 ID=cds-WP_021162394.1;Parent=gene-LDO49_RS29295;Dbxref=GenBank:WP_021162394.1;Name=WP_021162394.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884605.1;locus_tag=LDO49_RS29295;product=dihydrolipoyl dehydrogenase;protein_id=WP_021162394.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 55626 56723 . + . ID=gene-LDO49_RS29300;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=LDO49_RS29300;old_locus_tag=BCEP4_60051 NZ_CAJZAV010000268.1 Protein Homology CDS 55626 56723 . + 0 ID=cds-WP_027787679.1;Parent=gene-LDO49_RS29300;Dbxref=GenBank:WP_027787679.1;Name=WP_027787679.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011402415.1;locus_tag=LDO49_RS29300;product=cell division protein ZapE;protein_id=WP_027787679.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 56868 57278 . + . ID=gene-LDO49_RS29305;Name=LDO49_RS29305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29305;old_locus_tag=BCEP4_60052 NZ_CAJZAV010000268.1 Protein Homology CDS 56868 57278 . + 0 ID=cds-WP_021162392.1;Parent=gene-LDO49_RS29305;Dbxref=GenBank:WP_021162392.1;Name=WP_021162392.1;Ontology_term=GO:0006310,GO:0015074,GO:0032196,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA,transposition|0032196||IEA;inference=COORDINATES: protein motif:HMM:NF024736.6;locus_tag=LDO49_RS29305;product=transposase;protein_id=WP_021162392.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 57399 57860 . - . ID=gene-LDO49_RS29310;Name=LDO49_RS29310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29310;old_locus_tag=BCEP4_60053 NZ_CAJZAV010000268.1 Protein Homology CDS 57399 57860 . - 0 ID=cds-WP_021162390.1;Parent=gene-LDO49_RS29310;Dbxref=GenBank:WP_021162390.1;Name=WP_021162390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526860.1;locus_tag=LDO49_RS29310;product=DUF2147 domain-containing protein;protein_id=WP_021162390.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 58027 59715 . - . ID=gene-LDO49_RS29315;Name=LDO49_RS29315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29315;old_locus_tag=BCEP4_60054 NZ_CAJZAV010000268.1 Protein Homology CDS 58027 59715 . - 0 ID=cds-WP_060074191.1;Parent=gene-LDO49_RS29315;Dbxref=GenBank:WP_060074191.1;Name=WP_060074191.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363752.1;locus_tag=LDO49_RS29315;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_060074191.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 59860 61281 . - . ID=gene-LDO49_RS29320;Name=LDO49_RS29320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29320;old_locus_tag=BCEP4_60055 NZ_CAJZAV010000268.1 Protein Homology CDS 59860 61281 . - 0 ID=cds-WP_021162387.1;Parent=gene-LDO49_RS29320;Dbxref=GenBank:WP_021162387.1;Name=WP_021162387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400310.1;locus_tag=LDO49_RS29320;product=collagen-like triple helix repeat-containing protein;protein_id=WP_021162387.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq pseudogene 61322 61620 . - . ID=gene-LDO49_RS38355;Name=LDO49_RS38355;end_range=61620,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38355;old_locus_tag=BCEP4_60056;partial=true;pseudo=true NZ_CAJZAV010000268.1 Protein Homology CDS 61322 61620 . - 2 ID=cds-LDO49_RS38355;Parent=gene-LDO49_RS38355;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=61620,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351814.1;locus_tag=LDO49_RS38355;partial=true;product=collagen-like triple helix repeat-containing protein;pseudo=true;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 61631 62957 . - . ID=gene-LDO49_RS29325;Name=LDO49_RS29325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29325;old_locus_tag=BCEP4_60057;partial=true;start_range=.,61631 NZ_CAJZAV010000268.1 Protein Homology CDS 61631 62957 . - 0 ID=cds-WP_443798015.1;Parent=gene-LDO49_RS29325;Dbxref=GenBank:WP_443798015.1;Name=WP_443798015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545272.1;locus_tag=LDO49_RS29325;partial=true;product=collagen-like triple helix repeat-containing protein;protein_id=WP_443798015.1;start_range=.,61631;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 63636 63854 . + . ID=gene-LDO49_RS29335;Name=LDO49_RS29335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29335;old_locus_tag=BCEP4_60061 NZ_CAJZAV010000268.1 Protein Homology CDS 63636 63854 . + 0 ID=cds-WP_021162462.1;Parent=gene-LDO49_RS29335;Dbxref=GenBank:WP_021162462.1;Name=WP_021162462.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363755.1;locus_tag=LDO49_RS29335;product=Flp family type IVb pilin;protein_id=WP_021162462.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 63952 64452 . + . ID=gene-LDO49_RS29340;Name=LDO49_RS29340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29340;old_locus_tag=BCEP4_60062 NZ_CAJZAV010000268.1 Protein Homology CDS 63952 64452 . + 0 ID=cds-WP_042977049.1;Parent=gene-LDO49_RS29340;Dbxref=GenBank:WP_042977049.1;Name=WP_042977049.1;Ontology_term=GO:0006508,GO:0004190;gbkey=CDS;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404935.1;locus_tag=LDO49_RS29340;product=A24 family peptidase;protein_id=WP_042977049.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 64449 64895 . + . ID=gene-LDO49_RS29345;Name=LDO49_RS29345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29345;old_locus_tag=BCEP4_60063 NZ_CAJZAV010000268.1 Protein Homology CDS 64449 64895 . + 0 ID=cds-WP_021162464.1;Parent=gene-LDO49_RS29345;Dbxref=GenBank:WP_021162464.1;Name=WP_021162464.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414068.1;locus_tag=LDO49_RS29345;product=TadE/TadG family type IV pilus assembly protein;protein_id=WP_021162464.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 64962 65888 . + . ID=gene-LDO49_RS29350;Name=cpaB;gbkey=Gene;gene=cpaB;gene_biotype=protein_coding;locus_tag=LDO49_RS29350;old_locus_tag=BCEP4_60064 NZ_CAJZAV010000268.1 Protein Homology CDS 64962 65888 . + 0 ID=cds-WP_021162465.1;Parent=gene-LDO49_RS29350;Dbxref=GenBank:WP_021162465.1;Name=WP_021162465.1;gbkey=CDS;gene=cpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400303.1;locus_tag=LDO49_RS29350;product=Flp pilus assembly protein CpaB;protein_id=WP_021162465.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 65954 67285 . + . ID=gene-LDO49_RS29355;Name=LDO49_RS29355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29355;old_locus_tag=BCEP4_60065 NZ_CAJZAV010000268.1 Protein Homology CDS 65954 67285 . + 0 ID=cds-WP_021162466.1;Parent=gene-LDO49_RS29355;Dbxref=GenBank:WP_021162466.1;Name=WP_021162466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891455.1;locus_tag=LDO49_RS29355;product=type II and III secretion system protein family protein;protein_id=WP_021162466.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 67346 68620 . + . ID=gene-LDO49_RS29360;Name=LDO49_RS29360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29360;old_locus_tag=BCEP4_60066 NZ_CAJZAV010000268.1 Protein Homology CDS 67346 68620 . + 0 ID=cds-WP_042977061.1;Parent=gene-LDO49_RS29360;Dbxref=GenBank:WP_042977061.1;Name=WP_042977061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891453.1;locus_tag=LDO49_RS29360;product=fimbrial protein;protein_id=WP_042977061.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 68624 69979 . + . ID=gene-LDO49_RS29365;Name=LDO49_RS29365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29365;old_locus_tag=BCEP4_60067 NZ_CAJZAV010000268.1 Protein Homology CDS 68624 69979 . + 0 ID=cds-WP_059653372.1;Parent=gene-LDO49_RS29365;Dbxref=GenBank:WP_059653372.1;Name=WP_059653372.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213456.1;locus_tag=LDO49_RS29365;product=CpaF family protein;protein_id=WP_059653372.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 69972 70973 . + . ID=gene-LDO49_RS29370;Name=LDO49_RS29370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29370;old_locus_tag=BCEP4_60068 NZ_CAJZAV010000268.1 Protein Homology CDS 69972 70973 . + 0 ID=cds-WP_021162469.1;Parent=gene-LDO49_RS29370;Dbxref=GenBank:WP_021162469.1;Name=WP_021162469.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526866.1;locus_tag=LDO49_RS29370;product=type II secretion system F family protein;protein_id=WP_021162469.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 70978 71970 . + . ID=gene-LDO49_RS29375;Name=LDO49_RS29375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29375;old_locus_tag=BCEP4_60069 NZ_CAJZAV010000268.1 Protein Homology CDS 70978 71970 . + 0 ID=cds-WP_042977051.1;Parent=gene-LDO49_RS29375;Dbxref=GenBank:WP_042977051.1;Name=WP_042977051.1;Ontology_term=GO:0015628,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416976.1;locus_tag=LDO49_RS29375;product=type II secretion system F family protein;protein_id=WP_042977051.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 71989 72831 . + . ID=gene-LDO49_RS29380;Name=LDO49_RS29380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29380;old_locus_tag=BCEP4_60070 NZ_CAJZAV010000268.1 Protein Homology CDS 71989 72831 . + 0 ID=cds-WP_021162471.1;Parent=gene-LDO49_RS29380;Dbxref=GenBank:WP_021162471.1;Name=WP_021162471.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656711.1;locus_tag=LDO49_RS29380;product=tetratricopeptide repeat protein;protein_id=WP_021162471.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 72828 73181 . + . ID=gene-LDO49_RS29385;Name=LDO49_RS29385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29385;old_locus_tag=BCEP4_60071 NZ_CAJZAV010000268.1 Protein Homology CDS 72828 73181 . + 0 ID=cds-WP_021162472.1;Parent=gene-LDO49_RS29385;Dbxref=GenBank:WP_021162472.1;Name=WP_021162472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476139.1;locus_tag=LDO49_RS29385;product=DUF3613 domain-containing protein;protein_id=WP_021162472.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 73191 75218 . + . ID=gene-LDO49_RS29390;Name=LDO49_RS29390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29390;old_locus_tag=BCEP4_60072 NZ_CAJZAV010000268.1 Protein Homology CDS 73191 75218 . + 0 ID=cds-WP_258527625.1;Parent=gene-LDO49_RS29390;Dbxref=GenBank:WP_258527625.1;Name=WP_258527625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416975.1;locus_tag=LDO49_RS29390;product=pilus assembly protein TadG-related protein;protein_id=WP_258527625.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 75327 76718 . + . ID=gene-LDO49_RS29395;Name=LDO49_RS29395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29395;old_locus_tag=BCEP4_60073 NZ_CAJZAV010000268.1 Protein Homology CDS 75327 76718 . + 0 ID=cds-WP_048020714.1;Parent=gene-LDO49_RS29395;Dbxref=GenBank:WP_048020714.1;Name=WP_048020714.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026562.1;locus_tag=LDO49_RS29395;product=sigma 54-interacting transcriptional regulator;protein_id=WP_048020714.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 76773 77480 . + . ID=gene-LDO49_RS29400;Name=LDO49_RS29400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29400;old_locus_tag=BCEP4_60074 NZ_CAJZAV010000268.1 Protein Homology CDS 76773 77480 . + 0 ID=cds-WP_042977054.1;Parent=gene-LDO49_RS29400;Dbxref=GenBank:WP_042977054.1;Name=WP_042977054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545285.1;locus_tag=LDO49_RS29400;product=DUF2968 domain-containing protein;protein_id=WP_042977054.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 77558 78139 . - . ID=gene-LDO49_RS29405;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=LDO49_RS29405;old_locus_tag=BCEP4_60075 NZ_CAJZAV010000268.1 Protein Homology CDS 77558 78139 . - 0 ID=cds-WP_059484282.1;Parent=gene-LDO49_RS29405;Dbxref=GenBank:WP_059484282.1;Name=WP_059484282.1;Ontology_term=GO:0016070,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545286.1;locus_tag=LDO49_RS29405;product=RNA chaperone Hfq;protein_id=WP_059484282.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 78435 78719 . + . ID=gene-LDO49_RS29410;Name=LDO49_RS29410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29410;old_locus_tag=BCEP4_60076 NZ_CAJZAV010000268.1 Protein Homology CDS 78435 78719 . + 0 ID=cds-WP_048020708.1;Parent=gene-LDO49_RS29410;Dbxref=GenBank:WP_048020708.1;Name=WP_048020708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656717.1;locus_tag=LDO49_RS29410;product=PXPV repeat protein;protein_id=WP_048020708.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 78747 79664 . - . ID=gene-LDO49_RS29415;Name=LDO49_RS29415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29415;old_locus_tag=BCEP4_60077 NZ_CAJZAV010000268.1 Protein Homology CDS 78747 79664 . - 0 ID=cds-WP_021161542.1;Parent=gene-LDO49_RS29415;Dbxref=GenBank:WP_021161542.1;Name=WP_021161542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485282.1;locus_tag=LDO49_RS29415;product=DUF1571 domain-containing protein;protein_id=WP_021161542.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 79694 81448 . - . ID=gene-LDO49_RS29420;Name=LDO49_RS29420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29420;old_locus_tag=BCEP4_60078 NZ_CAJZAV010000268.1 Protein Homology CDS 79694 81448 . - 0 ID=cds-WP_060074195.1;Parent=gene-LDO49_RS29420;Dbxref=GenBank:WP_060074195.1;Name=WP_060074195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363772.1;locus_tag=LDO49_RS29420;product=AMP-binding protein;protein_id=WP_060074195.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 81605 82426 . - . ID=gene-LDO49_RS29425;Name=LDO49_RS29425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29425;old_locus_tag=BCEP4_60079 NZ_CAJZAV010000268.1 Protein Homology CDS 81605 82426 . - 0 ID=cds-WP_021161544.1;Parent=gene-LDO49_RS29425;Dbxref=GenBank:WP_021161544.1;Name=WP_021161544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351832.1;locus_tag=LDO49_RS29425;product=TetR/AcrR family transcriptional regulator;protein_id=WP_021161544.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 82642 83862 . - . ID=gene-LDO49_RS29430;Name=LDO49_RS29430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29430;old_locus_tag=BCEP4_60080 NZ_CAJZAV010000268.1 Protein Homology CDS 82642 83862 . - 0 ID=cds-WP_224052634.1;Parent=gene-LDO49_RS29430;Dbxref=GenBank:WP_224052634.1;Name=WP_224052634.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545290.1;locus_tag=LDO49_RS29430;product=MFS transporter;protein_id=WP_224052634.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 84142 84684 . + . ID=gene-LDO49_RS29435;Name=LDO49_RS29435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29435;old_locus_tag=BCEP4_60081 NZ_CAJZAV010000268.1 Protein Homology CDS 84142 84684 . + 0 ID=cds-WP_060074197.1;Parent=gene-LDO49_RS29435;Dbxref=GenBank:WP_060074197.1;Name=WP_060074197.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897181.1;locus_tag=LDO49_RS29435;product=GNAT family N-acetyltransferase;protein_id=WP_060074197.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 84815 85441 . + . ID=gene-LDO49_RS29440;Name=LDO49_RS29440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29440;old_locus_tag=BCEP4_60082 NZ_CAJZAV010000268.1 Protein Homology CDS 84815 85441 . + 0 ID=cds-WP_048020704.1;Parent=gene-LDO49_RS29440;Dbxref=GenBank:WP_048020704.1;Name=WP_048020704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416550.1;locus_tag=LDO49_RS29440;product=ParB-like protein;protein_id=WP_048020704.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 85449 87179 . + . ID=gene-LDO49_RS29445;Name=LDO49_RS29445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29445;old_locus_tag=BCEP4_60083 NZ_CAJZAV010000268.1 Protein Homology CDS 85449 87179 . + 0 ID=cds-WP_060074199.1;Parent=gene-LDO49_RS29445;Dbxref=GenBank:WP_060074199.1;Name=WP_060074199.1;Ontology_term=GO:0015103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic anion transmembrane transporter activity|0015103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485288.1;locus_tag=LDO49_RS29445;product=SulP family inorganic anion transporter;protein_id=WP_060074199.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 87202 88137 . - . ID=gene-LDO49_RS29450;Name=LDO49_RS29450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29450;old_locus_tag=BCEP4_60084 NZ_CAJZAV010000268.1 Protein Homology CDS 87202 88137 . - 0 ID=cds-WP_060074217.1;Parent=gene-LDO49_RS29450;Dbxref=GenBank:WP_060074217.1;Name=WP_060074217.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545294.1;locus_tag=LDO49_RS29450;product=carbohydrate kinase family protein;protein_id=WP_060074217.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 88270 89214 . - . ID=gene-LDO49_RS29455;Name=LDO49_RS29455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29455;old_locus_tag=BCEP4_60085 NZ_CAJZAV010000268.1 Protein Homology CDS 88270 89214 . - 0 ID=cds-WP_021161549.1;Parent=gene-LDO49_RS29455;Dbxref=GenBank:WP_021161549.1;Name=WP_021161549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545295.1;locus_tag=LDO49_RS29455;product=ABC transporter substrate-binding protein;protein_id=WP_021161549.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 89293 90330 . - . ID=gene-LDO49_RS29460;Name=LDO49_RS29460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29460;old_locus_tag=BCEP4_60086 NZ_CAJZAV010000268.1 Protein Homology CDS 89293 90330 . - 0 ID=cds-WP_021161550.1;Parent=gene-LDO49_RS29460;Dbxref=GenBank:WP_021161550.1;Name=WP_021161550.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410134.1;locus_tag=LDO49_RS29460;product=ABC transporter permease subunit;protein_id=WP_021161550.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 90371 91924 . - . ID=gene-LDO49_RS29465;Name=LDO49_RS29465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29465;old_locus_tag=BCEP4_60087 NZ_CAJZAV010000268.1 Protein Homology CDS 90371 91924 . - 0 ID=cds-WP_060074201.1;Parent=gene-LDO49_RS29465;Dbxref=GenBank:WP_060074201.1;Name=WP_060074201.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545297.1;locus_tag=LDO49_RS29465;product=sugar ABC transporter ATP-binding protein;protein_id=WP_060074201.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 91911 93158 . - . ID=gene-LDO49_RS29470;Name=LDO49_RS29470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29470;old_locus_tag=BCEP4_60088 NZ_CAJZAV010000268.1 Protein Homology CDS 91911 93158 . - 0 ID=cds-WP_048020803.1;Parent=gene-LDO49_RS29470;Dbxref=GenBank:WP_048020803.1;Name=WP_048020803.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554715.1;locus_tag=LDO49_RS29470;product=ROK family protein;protein_id=WP_048020803.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 93530 93616 . - . ID=gene-LDO49_RS29475;Name=LDO49_RS29475;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS29475;old_locus_tag=BCEP4_TRNA53 NZ_CAJZAV010000268.1 tRNAscan-SE tRNA 93530 93616 . - . ID=rna-LDO49_RS29475;Parent=gene-LDO49_RS29475;anticodon=(pos:complement(93580..93582));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29475;product=tRNA-Leu NZ_CAJZAV010000268.1 tRNAscan-SE exon 93530 93616 . - . ID=exon-LDO49_RS29475-1;Parent=rna-LDO49_RS29475;anticodon=(pos:complement(93580..93582));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29475;product=tRNA-Leu NZ_CAJZAV010000268.1 RefSeq gene 94028 94114 . - . ID=gene-LDO49_RS29480;Name=LDO49_RS29480;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS29480;old_locus_tag=BCEP4_TRNA52 NZ_CAJZAV010000268.1 tRNAscan-SE tRNA 94028 94114 . - . ID=rna-LDO49_RS29480;Parent=gene-LDO49_RS29480;anticodon=(pos:complement(94078..94080));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29480;product=tRNA-Leu NZ_CAJZAV010000268.1 tRNAscan-SE exon 94028 94114 . - . ID=exon-LDO49_RS29480-1;Parent=rna-LDO49_RS29480;anticodon=(pos:complement(94078..94080));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29480;product=tRNA-Leu NZ_CAJZAV010000268.1 RefSeq gene 94224 95213 . - . ID=gene-LDO49_RS29485;Name=LDO49_RS29485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29485;old_locus_tag=BCEP4_60092 NZ_CAJZAV010000268.1 Protein Homology CDS 94224 95213 . - 0 ID=cds-WP_060074203.1;Parent=gene-LDO49_RS29485;Dbxref=GenBank:WP_060074203.1;Name=WP_060074203.1;Ontology_term=GO:0042918,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=alkanesulfonate transmembrane transport|0042918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400271.1;locus_tag=LDO49_RS29485;product=aliphatic sulfonate ABC transporter substrate-binding protein;protein_id=WP_060074203.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 95551 95637 . - . ID=gene-LDO49_RS29490;Name=LDO49_RS29490;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS29490;old_locus_tag=BCEP4_TRNA51 NZ_CAJZAV010000268.1 tRNAscan-SE tRNA 95551 95637 . - . ID=rna-LDO49_RS29490;Parent=gene-LDO49_RS29490;anticodon=(pos:complement(95601..95603));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29490;product=tRNA-Leu NZ_CAJZAV010000268.1 tRNAscan-SE exon 95551 95637 . - . ID=exon-LDO49_RS29490-1;Parent=rna-LDO49_RS29490;anticodon=(pos:complement(95601..95603));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29490;product=tRNA-Leu NZ_CAJZAV010000268.1 RefSeq gene 95888 98380 . + . ID=gene-LDO49_RS29495;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=LDO49_RS29495;old_locus_tag=BCEP4_60094 NZ_CAJZAV010000268.1 Protein Homology CDS 95888 98380 . + 0 ID=cds-WP_021161554.1;Parent=gene-LDO49_RS29495;Dbxref=GenBank:WP_021161554.1;Name=WP_021161554.1;Ontology_term=GO:0003723,GO:0004518;gbkey=CDS;gene=rnr;go_function=RNA binding|0003723||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404898.1;locus_tag=LDO49_RS29495;product=ribonuclease R;protein_id=WP_021161554.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 98530 99273 . + . ID=gene-LDO49_RS29500;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=LDO49_RS29500;old_locus_tag=BCEP4_60095 NZ_CAJZAV010000268.1 Protein Homology CDS 98530 99273 . + 0 ID=cds-WP_021161555.1;Parent=gene-LDO49_RS29500;Dbxref=GenBank:WP_021161555.1;Name=WP_021161555.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884657.1;locus_tag=LDO49_RS29500;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_021161555.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 99371 100243 . + . ID=gene-LDO49_RS29505;Name=LDO49_RS29505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29505;old_locus_tag=BCEP4_60096 NZ_CAJZAV010000268.1 Protein Homology CDS 99371 100243 . + 0 ID=cds-WP_060074205.1;Parent=gene-LDO49_RS29505;Dbxref=GenBank:WP_060074205.1;Name=WP_060074205.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476120.1;locus_tag=LDO49_RS29505;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_060074205.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 100335 101030 . + . ID=gene-LDO49_RS29510;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=LDO49_RS29510;old_locus_tag=BCEP4_60097 NZ_CAJZAV010000268.1 Protein Homology CDS 100335 101030 . + 0 ID=cds-WP_027787641.1;Parent=gene-LDO49_RS29510;Dbxref=GenBank:WP_027787641.1;Name=WP_027787641.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351848.1;locus_tag=LDO49_RS29510;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_027787641.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 101310 102026 . + . ID=gene-LDO49_RS29515;Name=LDO49_RS29515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29515;old_locus_tag=BCEP4_60098 NZ_CAJZAV010000268.1 Protein Homology CDS 101310 102026 . + 0 ID=cds-WP_021161556.1;Parent=gene-LDO49_RS29515;Dbxref=GenBank:WP_021161556.1;Name=WP_021161556.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884662.1;locus_tag=LDO49_RS29515;product=FadR/GntR family transcriptional regulator;protein_id=WP_021161556.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 102128 103114 . + . ID=gene-LDO49_RS29520;Name=LDO49_RS29520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29520;old_locus_tag=BCEP4_60099 NZ_CAJZAV010000268.1 Protein Homology CDS 102128 103114 . + 0 ID=cds-WP_059817161.1;Parent=gene-LDO49_RS29520;Dbxref=GenBank:WP_059817161.1;Name=WP_059817161.1;Ontology_term=GO:0000166,GO:0003824;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758017.1;locus_tag=LDO49_RS29520;product=Gfo/Idh/MocA family protein;protein_id=WP_059817161.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 103167 103859 . - . ID=gene-LDO49_RS29525;Name=LDO49_RS29525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29525;old_locus_tag=BCEP4_60100 NZ_CAJZAV010000268.1 Protein Homology CDS 103167 103859 . - 0 ID=cds-WP_039358850.1;Parent=gene-LDO49_RS29525;Dbxref=GenBank:WP_039358850.1;Name=WP_039358850.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521640.1;locus_tag=LDO49_RS29525;product=amino acid ABC transporter permease;protein_id=WP_039358850.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 103982 104776 . - . ID=gene-LDO49_RS29530;Name=LDO49_RS29530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29530;old_locus_tag=BCEP4_60101 NZ_CAJZAV010000268.1 Protein Homology CDS 103982 104776 . - 0 ID=cds-WP_048020692.1;Parent=gene-LDO49_RS29530;Dbxref=GenBank:WP_048020692.1;Name=WP_048020692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884668.1;locus_tag=LDO49_RS29530;product=cystine ABC transporter substrate-binding protein;protein_id=WP_048020692.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 104878 105915 . - . ID=gene-LDO49_RS29535;Name=LDO49_RS29535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29535;old_locus_tag=BCEP4_60102 NZ_CAJZAV010000268.1 Protein Homology CDS 104878 105915 . - 0 ID=cds-WP_021161559.1;Parent=gene-LDO49_RS29535;Dbxref=GenBank:WP_021161559.1;Name=WP_021161559.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400200.1;locus_tag=LDO49_RS29535;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_021161559.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 106014 106844 . - . ID=gene-LDO49_RS29540;Name=LDO49_RS29540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29540;old_locus_tag=BCEP4_60103 NZ_CAJZAV010000268.1 Protein Homology CDS 106014 106844 . - 0 ID=cds-WP_048020690.1;Parent=gene-LDO49_RS29540;Dbxref=GenBank:WP_048020690.1;Name=WP_048020690.1;Ontology_term=GO:0016598,GO:0004057;gbkey=CDS;go_function=arginyl-tRNA--protein transferase activity|0004057||IEA;go_process=protein arginylation|0016598||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897163.1;locus_tag=LDO49_RS29540;product=arginyltransferase;protein_id=WP_048020690.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 106878 107642 . - . ID=gene-LDO49_RS29545;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=LDO49_RS29545;old_locus_tag=BCEP4_60104 NZ_CAJZAV010000268.1 Protein Homology CDS 106878 107642 . - 0 ID=cds-WP_021161561.1;Parent=gene-LDO49_RS29545;Dbxref=GenBank:WP_021161561.1;Name=WP_021161561.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:TIGR00667.1;locus_tag=LDO49_RS29545;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_021161561.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 107654 108199 . - . ID=gene-LDO49_RS29550;Name=LDO49_RS29550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29550;old_locus_tag=BCEP4_60105 NZ_CAJZAV010000268.1 Protein Homology CDS 107654 108199 . - 0 ID=cds-WP_021161562.1;Parent=gene-LDO49_RS29550;Dbxref=GenBank:WP_021161562.1;Name=WP_021161562.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897161.1;locus_tag=LDO49_RS29550;product=NUDIX hydrolase;protein_id=WP_021161562.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 108383 108459 . - . ID=gene-LDO49_RS29555;Name=LDO49_RS29555;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS29555;old_locus_tag=BCEP4_TRNA50 NZ_CAJZAV010000268.1 tRNAscan-SE tRNA 108383 108459 . - . ID=rna-LDO49_RS29555;Parent=gene-LDO49_RS29555;anticodon=(pos:complement(108423..108425));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29555;product=tRNA-Met NZ_CAJZAV010000268.1 tRNAscan-SE exon 108383 108459 . - . ID=exon-LDO49_RS29555-1;Parent=rna-LDO49_RS29555;anticodon=(pos:complement(108423..108425));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29555;product=tRNA-Met NZ_CAJZAV010000268.1 RefSeq gene 108657 109154 . + . ID=gene-LDO49_RS29560;Name=LDO49_RS29560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29560;old_locus_tag=BCEP4_60107 NZ_CAJZAV010000268.1 Protein Homology CDS 108657 109154 . + 0 ID=cds-WP_048020686.1;Parent=gene-LDO49_RS29560;Dbxref=GenBank:WP_048020686.1;Name=WP_048020686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092484.1;locus_tag=LDO49_RS29560;product=heme-degrading domain-containing protein;protein_id=WP_048020686.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 109158 109496 . + . ID=gene-LDO49_RS29565;Name=LDO49_RS29565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29565;old_locus_tag=BCEP4_60108 NZ_CAJZAV010000268.1 Protein Homology CDS 109158 109496 . + 0 ID=cds-WP_021161565.1;Parent=gene-LDO49_RS29565;Dbxref=GenBank:WP_021161565.1;Name=WP_021161565.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891379.1;locus_tag=LDO49_RS29565;product=DMT family transporter;protein_id=WP_021161565.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 109528 110688 . + . ID=gene-LDO49_RS29570;Name=LDO49_RS29570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29570;old_locus_tag=BCEP4_60109 NZ_CAJZAV010000268.1 Protein Homology CDS 109528 110688 . + 0 ID=cds-WP_060074207.1;Parent=gene-LDO49_RS29570;Dbxref=GenBank:WP_060074207.1;Name=WP_060074207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484164.1;locus_tag=LDO49_RS29570;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_060074207.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 110798 111226 . - . ID=gene-LDO49_RS29575;Name=LDO49_RS29575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29575;old_locus_tag=BCEP4_60110 NZ_CAJZAV010000268.1 Protein Homology CDS 110798 111226 . - 0 ID=cds-WP_006484223.1;Parent=gene-LDO49_RS29575;Dbxref=GenBank:WP_006484223.1;Name=WP_006484223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722967.1;locus_tag=LDO49_RS29575;product=hypothetical protein;protein_id=WP_006484223.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 111567 112724 . + . ID=gene-LDO49_RS29580;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=LDO49_RS29580;old_locus_tag=BCEP4_60112 NZ_CAJZAV010000268.1 Protein Homology CDS 111567 112724 . + 0 ID=cds-WP_027787631.1;Parent=gene-LDO49_RS29580;Dbxref=GenBank:WP_027787631.1;Name=WP_027787631.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722969.1;locus_tag=LDO49_RS29580;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_027787631.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 112742 113554 . + . ID=gene-LDO49_RS29585;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=LDO49_RS29585;old_locus_tag=BCEP4_60113 NZ_CAJZAV010000268.1 Protein Homology CDS 112742 113554 . + 0 ID=cds-WP_021161567.1;Parent=gene-LDO49_RS29585;Dbxref=GenBank:WP_021161567.1;Name=WP_021161567.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ssuC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897155.1;locus_tag=LDO49_RS29585;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=WP_021161567.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 113551 114510 . + . ID=gene-LDO49_RS29590;Name=LDO49_RS29590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29590;old_locus_tag=BCEP4_60114 NZ_CAJZAV010000268.1 Protein Homology CDS 113551 114510 . + 0 ID=cds-WP_060074209.1;Parent=gene-LDO49_RS29590;Dbxref=GenBank:WP_060074209.1;Name=WP_060074209.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897154.1;locus_tag=LDO49_RS29590;product=ATP-binding cassette domain-containing protein;protein_id=WP_060074209.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 114568 114783 . + . ID=gene-LDO49_RS29595;Name=LDO49_RS29595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29595;old_locus_tag=BCEP4_60115 NZ_CAJZAV010000268.1 Protein Homology CDS 114568 114783 . + 0 ID=cds-WP_006476104.1;Parent=gene-LDO49_RS29595;Dbxref=GenBank:WP_006476104.1;Name=WP_006476104.1;Ontology_term=GO:0015689;gbkey=CDS;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007588023.1;locus_tag=LDO49_RS29595;product=TOBE domain-containing protein;protein_id=WP_006476104.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 114922 115119 . + . ID=gene-LDO49_RS29600;Name=LDO49_RS29600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29600;old_locus_tag=BCEP4_60116 NZ_CAJZAV010000268.1 Protein Homology CDS 114922 115119 . + 0 ID=cds-WP_027787628.1;Parent=gene-LDO49_RS29600;Dbxref=GenBank:WP_027787628.1;Name=WP_027787628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010110042.1;locus_tag=LDO49_RS29600;product=hypothetical protein;protein_id=WP_027787628.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 115175 115420 . + . ID=gene-LDO49_RS29605;Name=LDO49_RS29605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29605;old_locus_tag=BCEP4_60117 NZ_CAJZAV010000268.1 Protein Homology CDS 115175 115420 . + 0 ID=cds-WP_011351864.1;Parent=gene-LDO49_RS29605;Dbxref=GenBank:WP_011351864.1;Name=WP_011351864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484161.1;locus_tag=LDO49_RS29605;product=hypothetical protein;protein_id=WP_011351864.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 115551 116537 . + . ID=gene-LDO49_RS29610;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=LDO49_RS29610;old_locus_tag=BCEP4_60118 NZ_CAJZAV010000268.1 Protein Homology CDS 115551 116537 . + 0 ID=cds-WP_021161571.1;Parent=gene-LDO49_RS29610;Dbxref=GenBank:WP_021161571.1;Name=WP_021161571.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491499.1;locus_tag=LDO49_RS29610;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_021161571.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 116595 116670 . + . ID=gene-LDO49_RS29615;Name=LDO49_RS29615;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS29615;old_locus_tag=BCEP4_TRNA4 NZ_CAJZAV010000268.1 tRNAscan-SE tRNA 116595 116670 . + . ID=rna-LDO49_RS29615;Parent=gene-LDO49_RS29615;anticodon=(pos:116628..116630);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29615;product=tRNA-His NZ_CAJZAV010000268.1 tRNAscan-SE exon 116595 116670 . + . ID=exon-LDO49_RS29615-1;Parent=rna-LDO49_RS29615;anticodon=(pos:116628..116630);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29615;product=tRNA-His NZ_CAJZAV010000268.1 RefSeq gene 118109 119071 . - . ID=gene-LDO49_RS29620;Name=LDO49_RS29620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29620;old_locus_tag=BCEP4_60121 NZ_CAJZAV010000268.1 GeneMarkS-2+ CDS 118109 119071 . - 0 ID=cds-WP_224052635.1;Parent=gene-LDO49_RS29620;Dbxref=GenBank:WP_224052635.1;Name=WP_224052635.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS29620;product=hypothetical protein;protein_id=WP_224052635.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 119089 119415 . - . ID=gene-LDO49_RS29625;Name=LDO49_RS29625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29625 NZ_CAJZAV010000268.1 GeneMarkS-2+ CDS 119089 119415 . - 0 ID=cds-WP_224052636.1;Parent=gene-LDO49_RS29625;Dbxref=GenBank:WP_224052636.1;Name=WP_224052636.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS29625;product=hypothetical protein;protein_id=WP_224052636.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 119614 121593 . - . ID=gene-LDO49_RS29630;Name=LDO49_RS29630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29630;old_locus_tag=BCEP4_60123 NZ_CAJZAV010000268.1 Protein Homology CDS 119614 121593 . - 0 ID=cds-WP_224052637.1;Parent=gene-LDO49_RS29630;Dbxref=GenBank:WP_224052637.1;Name=WP_224052637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009965531.1;locus_tag=LDO49_RS29630;product=AAA family ATPase;protein_id=WP_224052637.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 121590 121922 . - . ID=gene-LDO49_RS29635;Name=LDO49_RS29635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29635;old_locus_tag=BCEP4_60124 NZ_CAJZAV010000268.1 Protein Homology CDS 121590 121922 . - 0 ID=cds-WP_224052638.1;Parent=gene-LDO49_RS29635;Dbxref=GenBank:WP_224052638.1;Name=WP_224052638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008906942.1;locus_tag=LDO49_RS29635;product=hypothetical protein;protein_id=WP_224052638.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 121922 122146 . - . ID=gene-LDO49_RS29640;Name=LDO49_RS29640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29640;old_locus_tag=BCEP4_60125 NZ_CAJZAV010000268.1 Protein Homology CDS 121922 122146 . - 0 ID=cds-WP_224052639.1;Parent=gene-LDO49_RS29640;Dbxref=GenBank:WP_224052639.1;Name=WP_224052639.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545108.1;locus_tag=LDO49_RS29640;product=helix-turn-helix domain-containing protein;protein_id=WP_224052639.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 122255 124057 . - . ID=gene-LDO49_RS29645;Name=LDO49_RS29645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29645;old_locus_tag=BCEP4_60126 NZ_CAJZAV010000268.1 GeneMarkS-2+ CDS 122255 124057 . - 0 ID=cds-WP_224052640.1;Parent=gene-LDO49_RS29645;Dbxref=GenBank:WP_224052640.1;Name=WP_224052640.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS29645;product=hypothetical protein;protein_id=WP_224052640.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 124218 124685 . - . ID=gene-LDO49_RS29650;Name=LDO49_RS29650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29650;old_locus_tag=BCEP4_60127 NZ_CAJZAV010000268.1 Protein Homology CDS 124218 124685 . - 0 ID=cds-WP_049036182.1;Parent=gene-LDO49_RS29650;Dbxref=GenBank:WP_049036182.1;Name=WP_049036182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004546964.1;locus_tag=LDO49_RS29650;product=hypothetical protein;protein_id=WP_049036182.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 124734 125027 . - . ID=gene-LDO49_RS29655;Name=LDO49_RS29655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29655 NZ_CAJZAV010000268.1 GeneMarkS-2+ CDS 124734 125027 . - 0 ID=cds-WP_049036181.1;Parent=gene-LDO49_RS29655;Dbxref=GenBank:WP_049036181.1;Name=WP_049036181.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS29655;product=hypothetical protein;protein_id=WP_049036181.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 125651 127024 . - . ID=gene-LDO49_RS29660;Name=LDO49_RS29660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29660;old_locus_tag=BCEP4_60129 NZ_CAJZAV010000268.1 Protein Homology CDS 125651 127024 . - 0 ID=cds-WP_224052641.1;Parent=gene-LDO49_RS29660;Dbxref=GenBank:WP_224052641.1;Name=WP_224052641.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020749438.1;locus_tag=LDO49_RS29660;product=tyrosine-type recombinase/integrase;protein_id=WP_224052641.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq pseudogene 127637 127966 . - . ID=gene-LDO49_RS29665;Name=LDO49_RS29665;end_range=127966,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS29665;old_locus_tag=BCEP4_60130;partial=true;pseudo=true NZ_CAJZAV010000268.1 Protein Homology CDS 127637 127966 . - 0 ID=cds-LDO49_RS29665;Parent=gene-LDO49_RS29665;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015074;end_range=127966,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612266.1;locus_tag=LDO49_RS29665;partial=true;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 128049 129335 . + . ID=gene-LDO49_RS29670;Name=LDO49_RS29670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29670;old_locus_tag=BCEP4_60131 NZ_CAJZAV010000268.1 Protein Homology CDS 128049 129335 . + 0 ID=cds-WP_060074214.1;Parent=gene-LDO49_RS29670;Dbxref=GenBank:WP_060074214.1;Name=WP_060074214.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011903090.1;locus_tag=LDO49_RS29670;product=IS110 family transposase;protein_id=WP_060074214.1;transl_table=11 NZ_CAJZAV010000268.1 RefSeq pseudogene 129560 130371 . - . ID=gene-LDO49_RS29675;Name=LDO49_RS29675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS29675;partial=true;pseudo=true;start_range=.,129560 NZ_CAJZAV010000268.1 Protein Homology CDS 129560 130371 . - 0 ID=cds-LDO49_RS29675;Parent=gene-LDO49_RS29675;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612266.1;locus_tag=LDO49_RS29675;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,129560;transl_table=11 NZ_CAJZAV010000268.1 RefSeq gene 130478 130567 . - . ID=gene-LDO49_RS29680;Name=LDO49_RS29680;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS29680;old_locus_tag=BCEP4_TRNA49 NZ_CAJZAV010000268.1 tRNAscan-SE tRNA 130478 130567 . - . ID=rna-LDO49_RS29680;Parent=gene-LDO49_RS29680;anticodon=(pos:complement(130531..130533));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29680;product=tRNA-Leu NZ_CAJZAV010000268.1 tRNAscan-SE exon 130478 130567 . - . ID=exon-LDO49_RS29680-1;Parent=rna-LDO49_RS29680;anticodon=(pos:complement(130531..130533));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29680;product=tRNA-Leu NZ_CAJZAV010000268.1 RefSeq gene 130571 130646 . - . ID=gene-LDO49_RS29685;Name=LDO49_RS29685;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS29685;old_locus_tag=BCEP4_TRNA48 NZ_CAJZAV010000268.1 tRNAscan-SE tRNA 130571 130646 . - . ID=rna-LDO49_RS29685;Parent=gene-LDO49_RS29685;anticodon=(pos:complement(130611..130613));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29685;product=tRNA-Ile NZ_CAJZAV010000268.1 tRNAscan-SE exon 130571 130646 . - . ID=exon-LDO49_RS29685-1;Parent=rna-LDO49_RS29685;anticodon=(pos:complement(130611..130613));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29685;product=tRNA-Ile NZ_CAJZAV010000268.1 RefSeq pseudogene 130931 131690 . + . ID=gene-LDO49_RS29690;Name=LDO49_RS29690;end_range=131690,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS29690;partial=true;pseudo=true NZ_CAJZAV010000268.1 Protein Homology CDS 130931 131690 . + 0 ID=cds-LDO49_RS29690;Parent=gene-LDO49_RS29690;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004803;end_range=131690,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011002488.1;locus_tag=LDO49_RS29690;partial=true;product=ISL3 family transposase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000269.1 1 59864 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000269.1 RefSeq region 1 59864 . + . ID=NZ_CAJZAV010000269.1:1..59864;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_60 NZ_CAJZAV010000269.1 RefSeq gene 159 234 . - . ID=gene-LDO49_RS29695;Name=LDO49_RS29695;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS29695;old_locus_tag=BCEP4_TRNA40 NZ_CAJZAV010000269.1 tRNAscan-SE tRNA 159 234 . - . ID=rna-LDO49_RS29695;Parent=gene-LDO49_RS29695;anticodon=(pos:complement(199..201));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29695;product=tRNA-Ala NZ_CAJZAV010000269.1 tRNAscan-SE exon 159 234 . - . ID=exon-LDO49_RS29695-1;Parent=rna-LDO49_RS29695;anticodon=(pos:complement(199..201));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29695;product=tRNA-Ala NZ_CAJZAV010000269.1 RefSeq gene 363 1772 . - . ID=gene-LDO49_RS29700;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=LDO49_RS29700;old_locus_tag=BCEP4_600001 NZ_CAJZAV010000269.1 Protein Homology CDS 363 1772 . - 0 ID=cds-WP_042977076.1;Parent=gene-LDO49_RS29700;Dbxref=GenBank:WP_042977076.1;Name=WP_042977076.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723246.1;locus_tag=LDO49_RS29700;product=glutamate--tRNA ligase;protein_id=WP_042977076.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 2053 2979 . + . ID=gene-LDO49_RS29705;Name=LDO49_RS29705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29705;old_locus_tag=BCEP4_600002 NZ_CAJZAV010000269.1 Protein Homology CDS 2053 2979 . + 0 ID=cds-WP_021162487.1;Parent=gene-LDO49_RS29705;Dbxref=GenBank:WP_021162487.1;Name=WP_021162487.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364163.1;locus_tag=LDO49_RS29705;product=patatin-like phospholipase family protein;protein_id=WP_021162487.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 3126 3800 . - . ID=gene-LDO49_RS29710;Name=LDO49_RS29710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29710;old_locus_tag=BCEP4_600003 NZ_CAJZAV010000269.1 Protein Homology CDS 3126 3800 . - 0 ID=cds-WP_011352498.1;Parent=gene-LDO49_RS29710;Dbxref=GenBank:WP_011352498.1;Name=WP_011352498.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760701.1;locus_tag=LDO49_RS29710;product=C40 family peptidase;protein_id=WP_011352498.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 3929 5551 . - . ID=gene-LDO49_RS29715;Name=LDO49_RS29715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29715;old_locus_tag=BCEP4_600005 NZ_CAJZAV010000269.1 Protein Homology CDS 3929 5551 . - 0 ID=cds-WP_060074605.1;Parent=gene-LDO49_RS29715;Dbxref=GenBank:WP_060074605.1;Name=WP_060074605.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478450.1;locus_tag=LDO49_RS29715;product=ABC transporter ATP-binding protein;protein_id=WP_060074605.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 5548 6645 . - . ID=gene-LDO49_RS29720;Name=LDO49_RS29720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29720;old_locus_tag=BCEP4_600006 NZ_CAJZAV010000269.1 Protein Homology CDS 5548 6645 . - 0 ID=cds-WP_021162484.1;Parent=gene-LDO49_RS29720;Dbxref=GenBank:WP_021162484.1;Name=WP_021162484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478449.1;locus_tag=LDO49_RS29720;product=ABC transporter permease;protein_id=WP_021162484.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 6694 7737 . - . ID=gene-LDO49_RS29725;Name=LDO49_RS29725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29725;old_locus_tag=BCEP4_600007 NZ_CAJZAV010000269.1 Protein Homology CDS 6694 7737 . - 0 ID=cds-WP_042977074.1;Parent=gene-LDO49_RS29725;Dbxref=GenBank:WP_042977074.1;Name=WP_042977074.1;Ontology_term=GO:0042884,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=microcin transport|0042884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890352.1;locus_tag=LDO49_RS29725;product=microcin C ABC transporter permease YejB;protein_id=WP_042977074.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 7789 8472 . - . ID=gene-LDO49_RS29730;Name=LDO49_RS29730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29730 NZ_CAJZAV010000269.1 GeneMarkS-2+ CDS 7789 8472 . - 0 ID=cds-WP_148712287.1;Parent=gene-LDO49_RS29730;Dbxref=GenBank:WP_148712287.1;Name=WP_148712287.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS29730;product=ABC transporter substrate-binding protein;protein_id=WP_148712287.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 8548 8674 . + . ID=gene-LDO49_RS29735;Name=LDO49_RS29735;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS29735 NZ_CAJZAV010000269.1 tRNAscan-SE tRNA 8548 8674 . + . ID=rna-LDO49_RS29735;Parent=gene-LDO49_RS29735;anticodon=(pos:8579..8581);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29735;product=tRNA-Arg NZ_CAJZAV010000269.1 tRNAscan-SE exon 8548 8674 . + . ID=exon-LDO49_RS29735-1;Parent=rna-LDO49_RS29735;anticodon=(pos:8579..8581);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29735;product=tRNA-Arg NZ_CAJZAV010000269.1 RefSeq gene 8993 9481 . + . ID=gene-LDO49_RS29740;Name=LDO49_RS29740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29740 NZ_CAJZAV010000269.1 GeneMarkS-2+ CDS 8993 9481 . + 0 ID=cds-WP_155629119.1;Parent=gene-LDO49_RS29740;Dbxref=GenBank:WP_155629119.1;Name=WP_155629119.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS29740;product=hypothetical protein;protein_id=WP_155629119.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 9797 10162 . - . ID=gene-LDO49_RS29745;Name=LDO49_RS29745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29745;old_locus_tag=BCEP4_600009 NZ_CAJZAV010000269.1 Protein Homology CDS 9797 10162 . - 0 ID=cds-WP_021162483.1;Parent=gene-LDO49_RS29745;Dbxref=GenBank:WP_021162483.1;Name=WP_021162483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549502.1;locus_tag=LDO49_RS29745;product=hypothetical protein;protein_id=WP_021162483.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 10494 10826 . - . ID=gene-LDO49_RS29750;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=LDO49_RS29750;old_locus_tag=BCEP4_600010 NZ_CAJZAV010000269.1 Protein Homology CDS 10494 10826 . - 0 ID=cds-WP_011352504.1;Parent=gene-LDO49_RS29750;Dbxref=GenBank:WP_011352504.1;Name=WP_011352504.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoD;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352504.1;locus_tag=LDO49_RS29750;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_011352504.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 10827 11435 . - . ID=gene-LDO49_RS29755;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=LDO49_RS29755;old_locus_tag=BCEP4_600011 NZ_CAJZAV010000269.1 Protein Homology CDS 10827 11435 . - 0 ID=cds-WP_021162482.1;Parent=gene-LDO49_RS29755;Dbxref=GenBank:WP_021162482.1;Name=WP_021162482.1;Ontology_term=GO:0019646,GO:0009486;gbkey=CDS;gene=cyoC;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657331.1;locus_tag=LDO49_RS29755;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_021162482.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 11435 13441 . - . ID=gene-LDO49_RS29760;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=LDO49_RS29760;old_locus_tag=BCEP4_600012 NZ_CAJZAV010000269.1 Protein Homology CDS 11435 13441 . - 0 ID=cds-WP_021162481.1;Parent=gene-LDO49_RS29760;Dbxref=GenBank:WP_021162481.1;Name=WP_021162481.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoB;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331750.1;locus_tag=LDO49_RS29760;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_021162481.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 13445 14332 . - . ID=gene-LDO49_RS29765;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=LDO49_RS29765;old_locus_tag=BCEP4_600013 NZ_CAJZAV010000269.1 Protein Homology CDS 13445 14332 . - 0 ID=cds-WP_042977071.1;Parent=gene-LDO49_RS29765;Dbxref=GenBank:WP_042977071.1;Name=WP_042977071.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoA;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213114.1;locus_tag=LDO49_RS29765;product=ubiquinol oxidase subunit II;protein_id=WP_042977071.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 14603 16132 . - . ID=gene-LDO49_RS29770;Name=LDO49_RS29770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29770;old_locus_tag=BCEP4_600014 NZ_CAJZAV010000269.1 Protein Homology CDS 14603 16132 . - 0 ID=cds-WP_021162478.1;Parent=gene-LDO49_RS29770;Dbxref=GenBank:WP_021162478.1;Name=WP_021162478.1;Ontology_term=GO:0015990,GO:0042773,GO:0008137,GO:0048039,GO:0045271;gbkey=CDS;go_component=respiratory chain complex I|0045271||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,ubiquinone binding|0048039||IEA;go_process=electron transport coupled proton transport|0015990||IEA,ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364181.1;locus_tag=LDO49_RS29770;product=complex I subunit 4 family protein;protein_id=WP_021162478.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 16267 16437 . + . ID=gene-LDO49_RS29775;Name=LDO49_RS29775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29775 NZ_CAJZAV010000269.1 GeneMarkS-2+ CDS 16267 16437 . + 0 ID=cds-WP_175894766.1;Parent=gene-LDO49_RS29775;Dbxref=GenBank:WP_175894766.1;Name=WP_175894766.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS29775;product=hypothetical protein;protein_id=WP_175894766.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 16608 16826 . + . ID=gene-LDO49_RS29780;Name=LDO49_RS29780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29780 NZ_CAJZAV010000269.1 GeneMarkS-2+ CDS 16608 16826 . + 0 ID=cds-WP_060074607.1;Parent=gene-LDO49_RS29780;Dbxref=GenBank:WP_060074607.1;Name=WP_060074607.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS29780;product=hypothetical protein;protein_id=WP_060074607.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 17065 17158 . - . ID=gene-LDO49_RS29785;Name=LDO49_RS29785;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS29785;old_locus_tag=BCEP4_TRNA39 NZ_CAJZAV010000269.1 tRNAscan-SE tRNA 17065 17158 . - . ID=rna-LDO49_RS29785;Parent=gene-LDO49_RS29785;anticodon=(pos:complement(17122..17124));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29785;product=tRNA-Ser NZ_CAJZAV010000269.1 tRNAscan-SE exon 17065 17158 . - . ID=exon-LDO49_RS29785-1;Parent=rna-LDO49_RS29785;anticodon=(pos:complement(17122..17124));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS29785;product=tRNA-Ser NZ_CAJZAV010000269.1 RefSeq gene 17269 18522 . - . ID=gene-LDO49_RS29790;Name=LDO49_RS29790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29790;old_locus_tag=BCEP4_600016 NZ_CAJZAV010000269.1 Protein Homology CDS 17269 18522 . - 0 ID=cds-WP_027787050.1;Parent=gene-LDO49_RS29790;Dbxref=GenBank:WP_027787050.1;Name=WP_027787050.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492698.1;locus_tag=LDO49_RS29790;product=aspartate kinase;protein_id=WP_027787050.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 18866 20287 . - . ID=gene-LDO49_RS29795;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=LDO49_RS29795;old_locus_tag=BCEP4_600018 NZ_CAJZAV010000269.1 Protein Homology CDS 18866 20287 . - 0 ID=cds-WP_060074608.1;Parent=gene-LDO49_RS29795;Dbxref=GenBank:WP_060074608.1;Name=WP_060074608.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328792.1;locus_tag=LDO49_RS29795;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_060074608.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 20334 21305 . - . ID=gene-LDO49_RS29800;Name=LDO49_RS29800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29800;old_locus_tag=BCEP4_600019 NZ_CAJZAV010000269.1 Protein Homology CDS 20334 21305 . - 0 ID=cds-WP_006478433.1;Parent=gene-LDO49_RS29800;Dbxref=GenBank:WP_006478433.1;Name=WP_006478433.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065573.1;locus_tag=LDO49_RS29800;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_006478433.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 21409 22236 . - . ID=gene-LDO49_RS29805;Name=LDO49_RS29805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29805;old_locus_tag=BCEP4_600020 NZ_CAJZAV010000269.1 Protein Homology CDS 21409 22236 . - 0 ID=cds-WP_059493276.1;Parent=gene-LDO49_RS29805;Dbxref=GenBank:WP_059493276.1;Name=WP_059493276.1;Ontology_term=GO:0006281,GO:0019104,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851870.1;locus_tag=LDO49_RS29805;product=DNA-3-methyladenine glycosylase family protein;protein_id=WP_059493276.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 22280 23677 . - . ID=gene-LDO49_RS29810;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=LDO49_RS29810;old_locus_tag=BCEP4_600021 NZ_CAJZAV010000269.1 Protein Homology CDS 22280 23677 . - 0 ID=cds-WP_059493278.1;Parent=gene-LDO49_RS29810;Dbxref=GenBank:WP_059493278.1;Name=WP_059493278.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011488917.1;locus_tag=LDO49_RS29810;product=cysteine--tRNA ligase;protein_id=WP_059493278.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 23911 24633 . + . ID=gene-LDO49_RS29815;Name=LDO49_RS29815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29815;old_locus_tag=BCEP4_600023 NZ_CAJZAV010000269.1 Protein Homology CDS 23911 24633 . + 0 ID=cds-WP_021162659.1;Parent=gene-LDO49_RS29815;Dbxref=GenBank:WP_021162659.1;Name=WP_021162659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851871.1;locus_tag=LDO49_RS29815;product=tetratricopeptide repeat protein;protein_id=WP_021162659.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 24673 25254 . + . ID=gene-LDO49_RS29820;Name=LDO49_RS29820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29820;old_locus_tag=BCEP4_600024 NZ_CAJZAV010000269.1 Protein Homology CDS 24673 25254 . + 0 ID=cds-WP_021162660.1;Parent=gene-LDO49_RS29820;Dbxref=GenBank:WP_021162660.1;Name=WP_021162660.1;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364186.1;locus_tag=LDO49_RS29820;product=peptidylprolyl isomerase;protein_id=WP_021162660.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 25343 25834 . + . ID=gene-LDO49_RS29825;Name=LDO49_RS29825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29825;old_locus_tag=BCEP4_600025 NZ_CAJZAV010000269.1 Protein Homology CDS 25343 25834 . + 0 ID=cds-WP_006751616.1;Parent=gene-LDO49_RS29825;Dbxref=GenBank:WP_006751616.1;Name=WP_006751616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016345694.1;locus_tag=LDO49_RS29825;product=peptidylprolyl isomerase;protein_id=WP_006751616.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 25862 26662 . + . ID=gene-LDO49_RS29830;Name=LDO49_RS29830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29830;old_locus_tag=BCEP4_600026 NZ_CAJZAV010000269.1 Protein Homology CDS 25862 26662 . + 0 ID=cds-WP_060074609.1;Parent=gene-LDO49_RS29830;Dbxref=GenBank:WP_060074609.1;Name=WP_060074609.1;Ontology_term=GO:0009245,GO:0016462;gbkey=CDS;go_function=pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763970.1;locus_tag=LDO49_RS29830;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_060074609.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 26721 27494 . - . ID=gene-LDO49_RS29835;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=LDO49_RS29835;old_locus_tag=BCEP4_600027 NZ_CAJZAV010000269.1 Protein Homology CDS 26721 27494 . - 0 ID=cds-WP_048020851.1;Parent=gene-LDO49_RS29835;Dbxref=GenBank:WP_048020851.1;Name=WP_048020851.1;Ontology_term=GO:0006535,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896668.1;locus_tag=LDO49_RS29835;product=serine O-acetyltransferase;protein_id=WP_048020851.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 27801 28625 . - . ID=gene-LDO49_RS29840;Name=LDO49_RS29840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29840;old_locus_tag=BCEP4_600028 NZ_CAJZAV010000269.1 Protein Homology CDS 27801 28625 . - 0 ID=cds-WP_021162663.1;Parent=gene-LDO49_RS29840;Dbxref=GenBank:WP_021162663.1;Name=WP_021162663.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364188.1;locus_tag=LDO49_RS29840;product=RNA methyltransferase;protein_id=WP_021162663.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 28906 29709 . + . ID=gene-LDO49_RS29845;Name=LDO49_RS29845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29845;old_locus_tag=BCEP4_600029 NZ_CAJZAV010000269.1 Protein Homology CDS 28906 29709 . + 0 ID=cds-WP_224052643.1;Parent=gene-LDO49_RS29845;Dbxref=GenBank:WP_224052643.1;Name=WP_224052643.1;Ontology_term=GO:0006020,GO:0008934,GO:0046872;gbkey=CDS;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA,metal ion binding|0046872||IEA;go_process=inositol metabolic process|0006020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352522.1;locus_tag=LDO49_RS29845;product=inositol monophosphatase family protein;protein_id=WP_224052643.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 30035 31657 . + . ID=gene-LDO49_RS29850;Name=LDO49_RS29850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29850;old_locus_tag=BCEP4_600030 NZ_CAJZAV010000269.1 Protein Homology CDS 30035 31657 . + 0 ID=cds-WP_042977230.1;Parent=gene-LDO49_RS29850;Dbxref=GenBank:WP_042977230.1;Name=WP_042977230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483988.1;locus_tag=LDO49_RS29850;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_042977230.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 31775 32470 . - . ID=gene-LDO49_RS29855;Name=LDO49_RS29855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29855;old_locus_tag=BCEP4_600031 NZ_CAJZAV010000269.1 Protein Homology CDS 31775 32470 . - 0 ID=cds-WP_059589647.1;Parent=gene-LDO49_RS29855;Dbxref=GenBank:WP_059589647.1;Name=WP_059589647.1;Ontology_term=GO:0032259,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356133.1;locus_tag=LDO49_RS29855;product=methyltransferase family protein;protein_id=WP_059589647.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 33260 34030 . - . ID=gene-LDO49_RS29860;Name=LDO49_RS29860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29860;old_locus_tag=BCEP4_600033 NZ_CAJZAV010000269.1 Protein Homology CDS 33260 34030 . - 0 ID=cds-WP_060074610.1;Parent=gene-LDO49_RS29860;Dbxref=GenBank:WP_060074610.1;Name=WP_060074610.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012334.6;locus_tag=LDO49_RS29860;product=SDR family oxidoreductase;protein_id=WP_060074610.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 34996 35313 . + . ID=gene-LDO49_RS29865;Name=LDO49_RS29865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29865;old_locus_tag=BCEP4_600036 NZ_CAJZAV010000269.1 Protein Homology CDS 34996 35313 . + 0 ID=cds-WP_060074611.1;Parent=gene-LDO49_RS29865;Dbxref=GenBank:WP_060074611.1;Name=WP_060074611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423362.1;locus_tag=LDO49_RS29865;product=DUF2164 domain-containing protein;protein_id=WP_060074611.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 35703 38360 . + . ID=gene-LDO49_RS29870;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=LDO49_RS29870;old_locus_tag=BCEP4_600037 NZ_CAJZAV010000269.1 Protein Homology CDS 35703 38360 . + 0 ID=cds-WP_124475799.1;Parent=gene-LDO49_RS29870;Dbxref=GenBank:WP_124475799.1;Name=WP_124475799.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331772.1;locus_tag=LDO49_RS29870;product=DNA mismatch repair protein MutS;protein_id=WP_124475799.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 38341 39612 . + . ID=gene-LDO49_RS29875;Name=LDO49_RS29875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29875;old_locus_tag=BCEP4_600038 NZ_CAJZAV010000269.1 Protein Homology CDS 38341 39612 . + 0 ID=cds-WP_060074613.1;Parent=gene-LDO49_RS29875;Dbxref=GenBank:WP_060074613.1;Name=WP_060074613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213098.1;locus_tag=LDO49_RS29875;product=hypothetical protein;protein_id=WP_060074613.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 39592 40140 . - . ID=gene-LDO49_RS29880;Name=LDO49_RS29880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29880;old_locus_tag=BCEP4_600039 NZ_CAJZAV010000269.1 Protein Homology CDS 39592 40140 . - 0 ID=cds-WP_042977234.1;Parent=gene-LDO49_RS29880;Dbxref=GenBank:WP_042977234.1;Name=WP_042977234.1;Ontology_term=GO:0006457,GO:0003755,GO:0046872;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,metal ion binding|0046872||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025990.1;locus_tag=LDO49_RS29880;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_042977234.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 40173 41393 . + . ID=gene-LDO49_RS29885;Name=LDO49_RS29885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29885;old_locus_tag=BCEP4_600040 NZ_CAJZAV010000269.1 Protein Homology CDS 40173 41393 . + 0 ID=cds-WP_060074614.1;Parent=gene-LDO49_RS29885;Dbxref=GenBank:WP_060074614.1;Name=WP_060074614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478419.1;locus_tag=LDO49_RS29885;product=cupin domain-containing protein;protein_id=WP_060074614.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 41450 41695 . + . ID=gene-LDO49_RS37450;Name=LDO49_RS37450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37450 NZ_CAJZAV010000269.1 Protein Homology CDS 41450 41695 . + 0 ID=cds-WP_075122947.1;Parent=gene-LDO49_RS37450;Dbxref=GenBank:WP_075122947.1;Name=WP_075122947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657350.1;locus_tag=LDO49_RS37450;product=hypothetical protein;protein_id=WP_075122947.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 42003 42779 . - . ID=gene-LDO49_RS29890;Name=LDO49_RS29890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29890;old_locus_tag=BCEP4_600041 NZ_CAJZAV010000269.1 Protein Homology CDS 42003 42779 . - 0 ID=cds-WP_027786988.1;Parent=gene-LDO49_RS29890;Dbxref=GenBank:WP_027786988.1;Name=WP_027786988.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408194.1;locus_tag=LDO49_RS29890;product=MBL fold metallo-hydrolase;protein_id=WP_027786988.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 42784 43929 . - . ID=gene-LDO49_RS29895;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=LDO49_RS29895;old_locus_tag=BCEP4_600042 NZ_CAJZAV010000269.1 Protein Homology CDS 42784 43929 . - 0 ID=cds-WP_060074615.1;Parent=gene-LDO49_RS29895;Dbxref=GenBank:WP_060074615.1;Name=WP_060074615.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904698.1;locus_tag=LDO49_RS29895;product=outer membrane protein assembly factor BamC;protein_id=WP_060074615.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 44041 44946 . - . ID=gene-LDO49_RS29900;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=LDO49_RS29900;old_locus_tag=BCEP4_600043 NZ_CAJZAV010000269.1 Protein Homology CDS 44041 44946 . - 0 ID=cds-WP_021162674.1;Parent=gene-LDO49_RS29900;Dbxref=GenBank:WP_021162674.1;Name=WP_021162674.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751602.1;locus_tag=LDO49_RS29900;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_021162674.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 44995 45597 . - . ID=gene-LDO49_RS29905;Name=LDO49_RS29905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29905;old_locus_tag=BCEP4_600044 NZ_CAJZAV010000269.1 Protein Homology CDS 44995 45597 . - 0 ID=cds-WP_060074616.1;Parent=gene-LDO49_RS29905;Dbxref=GenBank:WP_060074616.1;Name=WP_060074616.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549480.1;locus_tag=LDO49_RS29905;product=class I SAM-dependent methyltransferase;protein_id=WP_060074616.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 45606 46808 . - . ID=gene-LDO49_RS29910;Name=LDO49_RS29910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29910;old_locus_tag=BCEP4_600045 NZ_CAJZAV010000269.1 Protein Homology CDS 45606 46808 . - 0 ID=cds-WP_011352534.1;Parent=gene-LDO49_RS29910;Dbxref=GenBank:WP_011352534.1;Name=WP_011352534.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010104925.1;locus_tag=LDO49_RS29910;product=tryptophan--tRNA ligase;protein_id=WP_011352534.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 46817 47479 . - . ID=gene-LDO49_RS29915;Name=LDO49_RS29915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29915;old_locus_tag=BCEP4_600046 NZ_CAJZAV010000269.1 Protein Homology CDS 46817 47479 . - 0 ID=cds-WP_021157698.1;Parent=gene-LDO49_RS29915;Dbxref=GenBank:WP_021157698.1;Name=WP_021157698.1;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009980725.1;locus_tag=LDO49_RS29915;product=site-2 protease family protein;protein_id=WP_021157698.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 47529 48161 . - . ID=gene-LDO49_RS29920;Name=LDO49_RS29920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29920;old_locus_tag=BCEP4_600047 NZ_CAJZAV010000269.1 Protein Homology CDS 47529 48161 . - 0 ID=cds-WP_021157697.1;Parent=gene-LDO49_RS29920;Dbxref=GenBank:WP_021157697.1;Name=WP_021157697.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401927.1;locus_tag=LDO49_RS29920;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_021157697.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 48231 49061 . - . ID=gene-LDO49_RS29925;Name=LDO49_RS29925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29925;old_locus_tag=BCEP4_600048 NZ_CAJZAV010000269.1 Protein Homology CDS 48231 49061 . - 0 ID=cds-WP_042973646.1;Parent=gene-LDO49_RS29925;Dbxref=GenBank:WP_042973646.1;Name=WP_042973646.1;Ontology_term=GO:0016311,GO:0097657;gbkey=CDS;go_function=3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723269.1;locus_tag=LDO49_RS29925;product=3'%2C5'-nucleoside bisphosphate phosphatase;protein_id=WP_042973646.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 49145 50035 . - . ID=gene-LDO49_RS29930;Name=LDO49_RS29930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29930;old_locus_tag=BCEP4_600049 NZ_CAJZAV010000269.1 Protein Homology CDS 49145 50035 . - 0 ID=cds-WP_060074617.1;Parent=gene-LDO49_RS29930;Dbxref=GenBank:WP_060074617.1;Name=WP_060074617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364204.1;locus_tag=LDO49_RS29930;product=alpha/beta fold hydrolase;protein_id=WP_060074617.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 50212 51069 . - . ID=gene-LDO49_RS29935;Name=LDO49_RS29935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29935;old_locus_tag=BCEP4_600050 NZ_CAJZAV010000269.1 Protein Homology CDS 50212 51069 . - 0 ID=cds-WP_059489138.1;Parent=gene-LDO49_RS29935;Dbxref=GenBank:WP_059489138.1;Name=WP_059489138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352539.1;locus_tag=LDO49_RS29935;product=ferritin-like domain-containing protein;protein_id=WP_059489138.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 51219 51743 . + . ID=gene-LDO49_RS29940;Name=LDO49_RS29940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29940;old_locus_tag=BCEP4_600052 NZ_CAJZAV010000269.1 Protein Homology CDS 51219 51743 . + 0 ID=cds-WP_021157692.1;Parent=gene-LDO49_RS29940;Dbxref=GenBank:WP_021157692.1;Name=WP_021157692.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890200.1;locus_tag=LDO49_RS29940;product=gamma carbonic anhydrase family protein;protein_id=WP_021157692.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 51769 52719 . + . ID=gene-LDO49_RS29945;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=LDO49_RS29945;old_locus_tag=BCEP4_600053 NZ_CAJZAV010000269.1 Protein Homology CDS 51769 52719 . + 0 ID=cds-WP_048020835.1;Parent=gene-LDO49_RS29945;Dbxref=GenBank:WP_048020835.1;Name=WP_048020835.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213089.1;locus_tag=LDO49_RS29945;product=Hsp33 family molecular chaperone HslO;protein_id=WP_048020835.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 52854 53228 . + . ID=gene-LDO49_RS29950;Name=LDO49_RS29950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29950;old_locus_tag=BCEP4_600054 NZ_CAJZAV010000269.1 Protein Homology CDS 52854 53228 . + 0 ID=cds-WP_059649408.1;Parent=gene-LDO49_RS29950;Dbxref=GenBank:WP_059649408.1;Name=WP_059649408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328812.1;locus_tag=LDO49_RS29950;product=hypothetical protein;protein_id=WP_059649408.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 53318 53743 . - . ID=gene-LDO49_RS29955;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=LDO49_RS29955;old_locus_tag=BCEP4_600055 NZ_CAJZAV010000269.1 Protein Homology CDS 53318 53743 . - 0 ID=cds-WP_043190303.1;Parent=gene-LDO49_RS29955;Dbxref=GenBank:WP_043190303.1;Name=WP_043190303.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401934.1;locus_tag=LDO49_RS29955;product=cell division protein FtsB;protein_id=WP_043190303.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 53825 55108 . - . ID=gene-LDO49_RS29960;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=LDO49_RS29960;old_locus_tag=BCEP4_600056 NZ_CAJZAV010000269.1 Protein Homology CDS 53825 55108 . - 0 ID=cds-WP_011352544.1;Parent=gene-LDO49_RS29960;Dbxref=GenBank:WP_011352544.1;Name=WP_011352544.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011001079.1;locus_tag=LDO49_RS29960;product=phosphopyruvate hydratase;protein_id=WP_011352544.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 55215 56069 . - . ID=gene-LDO49_RS29965;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=LDO49_RS29965;old_locus_tag=BCEP4_600057 NZ_CAJZAV010000269.1 Protein Homology CDS 55215 56069 . - 0 ID=cds-WP_021157688.1;Parent=gene-LDO49_RS29965;Dbxref=GenBank:WP_021157688.1;Name=WP_021157688.1;Ontology_term=GO:0009058,GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364209.1;locus_tag=LDO49_RS29965;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_021157688.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 56066 57724 . - . ID=gene-LDO49_RS29970;Name=LDO49_RS29970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29970;old_locus_tag=BCEP4_600058 NZ_CAJZAV010000269.1 Protein Homology CDS 56066 57724 . - 0 ID=cds-WP_021157687.1;Parent=gene-LDO49_RS29970;Dbxref=GenBank:WP_021157687.1;Name=WP_021157687.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401937.1;locus_tag=LDO49_RS29970;product=CTP synthase;protein_id=WP_021157687.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 57908 58753 . - . ID=gene-LDO49_RS29975;Name=LDO49_RS29975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29975;old_locus_tag=BCEP4_600059 NZ_CAJZAV010000269.1 Protein Homology CDS 57908 58753 . - 0 ID=cds-WP_021157686.1;Parent=gene-LDO49_RS29975;Dbxref=GenBank:WP_021157686.1;Name=WP_021157686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328813.1;locus_tag=LDO49_RS29975;product=alpha/beta fold hydrolase;protein_id=WP_021157686.1;transl_table=11 NZ_CAJZAV010000269.1 RefSeq gene 58803 59864 . - . ID=gene-LDO49_RS29980;Name=LDO49_RS29980;end_range=59864,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29980;old_locus_tag=BCEP4_600060;partial=true NZ_CAJZAV010000269.1 Protein Homology CDS 58803 59864 . - 0 ID=cds-WP_224052644.1;Parent=gene-LDO49_RS29980;Dbxref=GenBank:WP_224052644.1;Name=WP_224052644.1;Ontology_term=GO:0030420,GO:0016787,GO:0046872,GO:0016020;end_range=59864,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328814.1;locus_tag=LDO49_RS29980;partial=true;product=ComEC/Rec2 family competence protein;protein_id=WP_224052644.1;transl_table=11 ##sequence-region NZ_CAJZAV010000270.1 1 41676 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000270.1 RefSeq region 1 41676 . + . ID=NZ_CAJZAV010000270.1:1..41676;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_61 NZ_CAJZAV010000270.1 RefSeq gene 129 1277 . + . ID=gene-LDO49_RS29985;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=LDO49_RS29985;old_locus_tag=BCEP4_610001 NZ_CAJZAV010000270.1 Protein Homology CDS 129 1277 . + 0 ID=cds-WP_059483957.1;Parent=gene-LDO49_RS29985;Dbxref=GenBank:WP_059483957.1;Name=WP_059483957.1;Ontology_term=GO:0008360,GO:0016020;gbkey=CDS;gene=rodA;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525857.1;locus_tag=LDO49_RS29985;product=rod shape-determining protein RodA;protein_id=WP_059483957.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 1383 2186 . - . ID=gene-LDO49_RS29990;Name=LDO49_RS29990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29990;old_locus_tag=BCEP4_610002 NZ_CAJZAV010000270.1 Protein Homology CDS 1383 2186 . - 0 ID=cds-WP_059483958.1;Parent=gene-LDO49_RS29990;Dbxref=GenBank:WP_059483958.1;Name=WP_059483958.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353561.1;locus_tag=LDO49_RS29990;product=tetratricopeptide repeat protein;protein_id=WP_059483958.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 2183 2968 . - . ID=gene-LDO49_RS29995;Name=LDO49_RS29995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS29995;old_locus_tag=BCEP4_610003 NZ_CAJZAV010000270.1 Protein Homology CDS 2183 2968 . - 0 ID=cds-WP_021163974.1;Parent=gene-LDO49_RS29995;Dbxref=GenBank:WP_021163974.1;Name=WP_021163974.1;Ontology_term=GO:0016830,GO:0046872;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334622.1;locus_tag=LDO49_RS29995;product=HpcH/HpaI aldolase family protein;protein_id=WP_021163974.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 3290 3742 . - . ID=gene-LDO49_RS30000;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=LDO49_RS30000;old_locus_tag=BCEP4_610004 NZ_CAJZAV010000270.1 Protein Homology CDS 3290 3742 . - 0 ID=cds-WP_021163975.1;Parent=gene-LDO49_RS30000;Dbxref=GenBank:WP_021163975.1;Name=WP_021163975.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482561.1;locus_tag=LDO49_RS30000;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_021163975.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 3761 4393 . - . ID=gene-LDO49_RS30005;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=LDO49_RS30005;old_locus_tag=BCEP4_610005 NZ_CAJZAV010000270.1 Protein Homology CDS 3761 4393 . - 0 ID=cds-WP_021163976.1;Parent=gene-LDO49_RS30005;Dbxref=GenBank:WP_021163976.1;Name=WP_021163976.1;Ontology_term=GO:0006400,GO:0008616,GO:0046872,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007733358.1;locus_tag=LDO49_RS30005;product=7-carboxy-7-deazaguanine synthase;protein_id=WP_021163976.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 4469 5203 . - . ID=gene-LDO49_RS30010;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=LDO49_RS30010;old_locus_tag=BCEP4_610006 NZ_CAJZAV010000270.1 Protein Homology CDS 4469 5203 . - 0 ID=cds-WP_021163977.1;Parent=gene-LDO49_RS30010;Dbxref=GenBank:WP_021163977.1;Name=WP_021163977.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407218.1;locus_tag=LDO49_RS30010;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_021163977.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 5554 5629 . - . ID=gene-LDO49_RS30015;Name=LDO49_RS30015;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS30015;old_locus_tag=BCEP4_TRNA38 NZ_CAJZAV010000270.1 tRNAscan-SE tRNA 5554 5629 . - . ID=rna-LDO49_RS30015;Parent=gene-LDO49_RS30015;anticodon=(pos:complement(5594..5596));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS30015;product=tRNA-Phe NZ_CAJZAV010000270.1 tRNAscan-SE exon 5554 5629 . - . ID=exon-LDO49_RS30015-1;Parent=rna-LDO49_RS30015;anticodon=(pos:complement(5594..5596));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS30015;product=tRNA-Phe NZ_CAJZAV010000270.1 RefSeq gene 5690 6391 . - . ID=gene-LDO49_RS30020;Name=esaR;gbkey=Gene;gene=esaR;gene_biotype=protein_coding;locus_tag=LDO49_RS30020;old_locus_tag=BCEP4_610008 NZ_CAJZAV010000270.1 Protein Homology CDS 5690 6391 . - 0 ID=cds-WP_021163978.1;Parent=gene-LDO49_RS30020;Dbxref=GenBank:WP_021163978.1;Name=WP_021163978.1;gbkey=CDS;gene=esaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495385.1;locus_tag=LDO49_RS30020;product=response regulator transcription factor EsaR;protein_id=WP_021163978.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 6392 8806 . - . ID=gene-LDO49_RS30025;Name=esaS;gbkey=Gene;gene=esaS;gene_biotype=protein_coding;locus_tag=LDO49_RS30025;old_locus_tag=BCEP4_610009 NZ_CAJZAV010000270.1 Protein Homology CDS 6392 8806 . - 0 ID=cds-WP_042978240.1;Parent=gene-LDO49_RS30025;Dbxref=GenBank:WP_042978240.1;Name=WP_042978240.1;Note=Enhanced Sensitivity to Antibiotics Sensor;gbkey=CDS;gene=esaS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353567.1;locus_tag=LDO49_RS30025;product=sensor histidine kinase EsaS;protein_id=WP_042978240.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 8796 9386 . - . ID=gene-LDO49_RS30030;Name=LDO49_RS30030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30030;old_locus_tag=BCEP4_610010 NZ_CAJZAV010000270.1 Protein Homology CDS 8796 9386 . - 0 ID=cds-WP_021163980.1;Parent=gene-LDO49_RS30030;Dbxref=GenBank:WP_021163980.1;Name=WP_021163980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553747.1;locus_tag=LDO49_RS30030;product=DUF4390 domain-containing protein;protein_id=WP_021163980.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 9383 10774 . - . ID=gene-LDO49_RS30035;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=LDO49_RS30035;old_locus_tag=BCEP4_610011 NZ_CAJZAV010000270.1 Protein Homology CDS 9383 10774 . - 0 ID=cds-WP_060073977.1;Parent=gene-LDO49_RS30035;Dbxref=GenBank:WP_060073977.1;Name=WP_060073977.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750072.1;locus_tag=LDO49_RS30035;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_060073977.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 10995 11852 . - . ID=gene-LDO49_RS30040;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=LDO49_RS30040;old_locus_tag=BCEP4_610013 NZ_CAJZAV010000270.1 Protein Homology CDS 10995 11852 . - 0 ID=cds-WP_006485774.1;Parent=gene-LDO49_RS30040;Dbxref=GenBank:WP_006485774.1;Name=WP_006485774.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007581962.1;locus_tag=LDO49_RS30040;product=zinc metalloprotease HtpX;protein_id=WP_006485774.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 11953 12588 . - . ID=gene-LDO49_RS30045;Name=LDO49_RS30045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30045;old_locus_tag=BCEP4_610014 NZ_CAJZAV010000270.1 Protein Homology CDS 11953 12588 . - 0 ID=cds-WP_021163983.1;Parent=gene-LDO49_RS30045;Dbxref=GenBank:WP_021163983.1;Name=WP_021163983.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414433.1;locus_tag=LDO49_RS30045;product=LysE family translocator;protein_id=WP_021163983.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 12709 13692 . - . ID=gene-LDO49_RS30050;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=LDO49_RS30050;old_locus_tag=BCEP4_610015 NZ_CAJZAV010000270.1 Protein Homology CDS 12709 13692 . - 0 ID=cds-WP_060073979.1;Parent=gene-LDO49_RS30050;Dbxref=GenBank:WP_060073979.1;Name=WP_060073979.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009972654.1;locus_tag=LDO49_RS30050;product=methionyl-tRNA formyltransferase;protein_id=WP_060073979.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 13727 14230 . - . ID=gene-LDO49_RS30055;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=LDO49_RS30055;old_locus_tag=BCEP4_610016 NZ_CAJZAV010000270.1 Protein Homology CDS 13727 14230 . - 0 ID=cds-WP_011353573.1;Parent=gene-LDO49_RS30055;Dbxref=GenBank:WP_011353573.1;Name=WP_011353573.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100727.1;locus_tag=LDO49_RS30055;product=peptide deformylase;protein_id=WP_011353573.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 14416 15744 . + . ID=gene-LDO49_RS30060;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=LDO49_RS30060;old_locus_tag=BCEP4_610017 NZ_CAJZAV010000270.1 Protein Homology CDS 14416 15744 . + 0 ID=cds-WP_060073981.1;Parent=gene-LDO49_RS30060;Dbxref=GenBank:WP_060073981.1;Name=WP_060073981.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485767.1;locus_tag=LDO49_RS30060;product=DNA-processing protein DprA;protein_id=WP_060073981.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 15781 16161 . + . ID=gene-LDO49_RS30065;Name=LDO49_RS30065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30065;old_locus_tag=BCEP4_610018 NZ_CAJZAV010000270.1 Protein Homology CDS 15781 16161 . + 0 ID=cds-WP_021159864.1;Parent=gene-LDO49_RS30065;Dbxref=GenBank:WP_021159864.1;Name=WP_021159864.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477457.1;locus_tag=LDO49_RS30065;product=thioredoxin family protein;protein_id=WP_021159864.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 16355 18979 . + . ID=gene-LDO49_RS30070;Name=LDO49_RS30070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30070;old_locus_tag=BCEP4_610019 NZ_CAJZAV010000270.1 Protein Homology CDS 16355 18979 . + 0 ID=cds-WP_060073983.1;Parent=gene-LDO49_RS30070;Dbxref=GenBank:WP_060073983.1;Name=WP_060073983.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009902112.1;locus_tag=LDO49_RS30070;product=DNA topoisomerase III;protein_id=WP_060073983.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 19119 20168 . - . ID=gene-LDO49_RS30075;Name=LDO49_RS30075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30075;old_locus_tag=BCEP4_610020 NZ_CAJZAV010000270.1 Protein Homology CDS 19119 20168 . - 0 ID=cds-WP_021159861.1;Parent=gene-LDO49_RS30075;Dbxref=GenBank:WP_021159861.1;Name=WP_021159861.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893648.1;locus_tag=LDO49_RS30075;product=LysR family transcriptional regulator;protein_id=WP_021159861.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 20595 21608 . + . ID=gene-LDO49_RS30080;Name=LDO49_RS30080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30080;old_locus_tag=BCEP4_610021 NZ_CAJZAV010000270.1 Protein Homology CDS 20595 21608 . + 0 ID=cds-WP_021159860.1;Parent=gene-LDO49_RS30080;Dbxref=GenBank:WP_021159860.1;Name=WP_021159860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090305.1;locus_tag=LDO49_RS30080;product=D-2-hydroxyacid dehydrogenase family protein;protein_id=WP_021159860.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 21656 22522 . - . ID=gene-LDO49_RS30085;Name=LDO49_RS30085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30085;old_locus_tag=BCEP4_610022 NZ_CAJZAV010000270.1 Protein Homology CDS 21656 22522 . - 0 ID=cds-WP_060073988.1;Parent=gene-LDO49_RS30085;Dbxref=GenBank:WP_060073988.1;Name=WP_060073988.1;Ontology_term=GO:0052689;gbkey=CDS;go_function=carboxylic ester hydrolase activity|0052689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407226.1;locus_tag=LDO49_RS30085;product=patatin-like phospholipase family protein;protein_id=WP_060073988.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 22531 22935 . - . ID=gene-LDO49_RS30090;Name=LDO49_RS30090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30090;old_locus_tag=BCEP4_610023 NZ_CAJZAV010000270.1 Protein Homology CDS 22531 22935 . - 0 ID=cds-WP_027785770.1;Parent=gene-LDO49_RS30090;Dbxref=GenBank:WP_027785770.1;Name=WP_027785770.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877330.1;locus_tag=LDO49_RS30090;product=PaaI family thioesterase;protein_id=WP_027785770.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 23126 23201 . + . ID=gene-LDO49_RS30095;Name=LDO49_RS30095;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS30095;old_locus_tag=BCEP4_TRNA14 NZ_CAJZAV010000270.1 tRNAscan-SE tRNA 23126 23201 . + . ID=rna-LDO49_RS30095;Parent=gene-LDO49_RS30095;anticodon=(pos:23159..23161);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS30095;product=tRNA-Lys NZ_CAJZAV010000270.1 tRNAscan-SE exon 23126 23201 . + . ID=exon-LDO49_RS30095-1;Parent=rna-LDO49_RS30095;anticodon=(pos:23159..23161);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS30095;product=tRNA-Lys NZ_CAJZAV010000270.1 RefSeq gene 24076 24723 . - . ID=gene-LDO49_RS30100;Name=LDO49_RS30100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30100;old_locus_tag=BCEP4_610025 NZ_CAJZAV010000270.1 GeneMarkS-2+ CDS 24076 24723 . - 0 ID=cds-WP_224052645.1;Parent=gene-LDO49_RS30100;Dbxref=GenBank:WP_224052645.1;Name=WP_224052645.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS30100;product=hypothetical protein;protein_id=WP_224052645.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 24710 25720 . - . ID=gene-LDO49_RS30105;Name=LDO49_RS30105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30105 NZ_CAJZAV010000270.1 GeneMarkS-2+ CDS 24710 25720 . - 0 ID=cds-WP_224052646.1;Parent=gene-LDO49_RS30105;Dbxref=GenBank:WP_224052646.1;Name=WP_224052646.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS30105;product=hypothetical protein;protein_id=WP_224052646.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 26261 27730 . + . ID=gene-LDO49_RS30115;Name=LDO49_RS30115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30115;old_locus_tag=BCEP4_610029 NZ_CAJZAV010000270.1 Protein Homology CDS 26261 27730 . + 0 ID=cds-WP_372585879.1;Parent=gene-LDO49_RS30115;Dbxref=GenBank:WP_372585879.1;Name=WP_372585879.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: protein motif:HMM:NF046985.2;locus_tag=LDO49_RS30115;product=N-6 DNA methylase;protein_id=WP_372585879.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 27711 28664 . + . ID=gene-LDO49_RS30120;Name=LDO49_RS30120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30120;old_locus_tag=BCEP4_610030 NZ_CAJZAV010000270.1 GeneMarkS-2+ CDS 27711 28664 . + 0 ID=cds-WP_224052647.1;Parent=gene-LDO49_RS30120;Dbxref=GenBank:WP_224052647.1;Name=WP_224052647.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS30120;product=hypothetical protein;protein_id=WP_224052647.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 28757 29809 . + . ID=gene-LDO49_RS30125;Name=LDO49_RS30125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30125;old_locus_tag=BCEP4_610031 NZ_CAJZAV010000270.1 GeneMarkS-2+ CDS 28757 29809 . + 0 ID=cds-WP_224052648.1;Parent=gene-LDO49_RS30125;Dbxref=GenBank:WP_224052648.1;Name=WP_224052648.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS30125;product=hypothetical protein;protein_id=WP_224052648.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 30739 31260 . + . ID=gene-LDO49_RS30130;Name=LDO49_RS30130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30130;old_locus_tag=BCEP4_610035 NZ_CAJZAV010000270.1 GeneMarkS-2+ CDS 30739 31260 . + 0 ID=cds-WP_224052649.1;Parent=gene-LDO49_RS30130;Dbxref=GenBank:WP_224052649.1;Name=WP_224052649.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS30130;product=hypothetical protein;protein_id=WP_224052649.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 31263 31856 . + . ID=gene-LDO49_RS30135;Name=LDO49_RS30135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30135;old_locus_tag=BCEP4_610036 NZ_CAJZAV010000270.1 GeneMarkS-2+ CDS 31263 31856 . + 0 ID=cds-WP_224052650.1;Parent=gene-LDO49_RS30135;Dbxref=GenBank:WP_224052650.1;Name=WP_224052650.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS30135;product=hypothetical protein;protein_id=WP_224052650.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 31930 32118 . + . ID=gene-LDO49_RS30140;Name=LDO49_RS30140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30140;old_locus_tag=BCEP4_610037 NZ_CAJZAV010000270.1 GeneMarkS-2+ CDS 31930 32118 . + 0 ID=cds-WP_224052651.1;Parent=gene-LDO49_RS30140;Dbxref=GenBank:WP_224052651.1;Name=WP_224052651.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS30140;product=hypothetical protein;protein_id=WP_224052651.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 32770 33918 . + . ID=gene-LDO49_RS30145;Name=LDO49_RS30145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30145;old_locus_tag=BCEP4_610039 NZ_CAJZAV010000270.1 Protein Homology CDS 32770 33918 . + 0 ID=cds-WP_224052652.1;Parent=gene-LDO49_RS30145;Dbxref=GenBank:WP_224052652.1;Name=WP_224052652.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.6;locus_tag=LDO49_RS30145;product=tyrosine-type recombinase/integrase;protein_id=WP_224052652.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 33987 35918 . + . ID=gene-LDO49_RS30150;Name=LDO49_RS30150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30150;old_locus_tag=BCEP4_610040 NZ_CAJZAV010000270.1 Protein Homology CDS 33987 35918 . + 0 ID=cds-WP_224052653.1;Parent=gene-LDO49_RS30150;Dbxref=GenBank:WP_224052653.1;Name=WP_224052653.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01613.1;locus_tag=LDO49_RS30150;product=DNA primase family protein;protein_id=WP_224052653.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 36538 37590 . + . ID=gene-LDO49_RS30155;Name=LDO49_RS30155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30155;old_locus_tag=BCEP4_610042 NZ_CAJZAV010000270.1 Protein Homology CDS 36538 37590 . + 0 ID=cds-WP_060073990.1;Parent=gene-LDO49_RS30155;Dbxref=GenBank:WP_060073990.1;Name=WP_060073990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546491.1;locus_tag=LDO49_RS30155;product=DUF3592 domain-containing protein;protein_id=WP_060073990.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 37645 38259 . - . ID=gene-LDO49_RS30160;Name=LDO49_RS30160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30160;old_locus_tag=BCEP4_610043 NZ_CAJZAV010000270.1 Protein Homology CDS 37645 38259 . - 0 ID=cds-WP_060073992.1;Parent=gene-LDO49_RS30160;Dbxref=GenBank:WP_060073992.1;Name=WP_060073992.1;Ontology_term=GO:0003676,GO:0008270;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495393.1;locus_tag=LDO49_RS30160;product=CGNR zinc finger domain-containing protein;protein_id=WP_060073992.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 38341 39156 . + . ID=gene-LDO49_RS30165;Name=LDO49_RS30165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30165;old_locus_tag=BCEP4_610044 NZ_CAJZAV010000270.1 Protein Homology CDS 38341 39156 . + 0 ID=cds-WP_060073997.1;Parent=gene-LDO49_RS30165;Dbxref=GenBank:WP_060073997.1;Name=WP_060073997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353583.1;locus_tag=LDO49_RS30165;product=alpha/beta fold hydrolase;protein_id=WP_060073997.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 39194 39952 . - . ID=gene-LDO49_RS30170;Name=LDO49_RS30170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30170;old_locus_tag=BCEP4_610045 NZ_CAJZAV010000270.1 Protein Homology CDS 39194 39952 . - 0 ID=cds-WP_059483973.1;Parent=gene-LDO49_RS30170;Dbxref=GenBank:WP_059483973.1;Name=WP_059483973.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485792.1;locus_tag=LDO49_RS30170;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_059483973.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 39949 40629 . - . ID=gene-LDO49_RS30175;Name=LDO49_RS30175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30175;old_locus_tag=BCEP4_610046 NZ_CAJZAV010000270.1 Protein Homology CDS 39949 40629 . - 0 ID=cds-WP_059496608.1;Parent=gene-LDO49_RS30175;Dbxref=GenBank:WP_059496608.1;Name=WP_059496608.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485773.1;locus_tag=LDO49_RS30175;product=amino acid ABC transporter permease;protein_id=WP_059496608.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 40644 41426 . - . ID=gene-LDO49_RS30180;Name=LDO49_RS30180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30180;old_locus_tag=BCEP4_610047 NZ_CAJZAV010000270.1 Protein Homology CDS 40644 41426 . - 0 ID=cds-WP_059483975.1;Parent=gene-LDO49_RS30180;Dbxref=GenBank:WP_059483975.1;Name=WP_059483975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334643.1;locus_tag=LDO49_RS30180;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_059483975.1;transl_table=11 NZ_CAJZAV010000270.1 RefSeq gene 41445 41676 . + . ID=gene-LDO49_RS30185;Name=LDO49_RS30185;end_range=41676,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30185;partial=true NZ_CAJZAV010000270.1 GeneMarkS-2+ CDS 41445 41676 . + 0 ID=cds-WP_224052655.1;Parent=gene-LDO49_RS30185;Dbxref=GenBank:WP_224052655.1;Name=WP_224052655.1;end_range=41676,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS30185;partial=true;product=hypothetical protein;protein_id=WP_224052655.1;transl_table=11 ##sequence-region NZ_CAJZAV010000271.1 1 32783 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000271.1 RefSeq region 1 32783 . + . ID=NZ_CAJZAV010000271.1:1..32783;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_62 NZ_CAJZAV010000271.1 RefSeq gene 1 2653 . - . ID=gene-LDO49_RS30190;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=LDO49_RS30190;partial=true;start_range=.,1 NZ_CAJZAV010000271.1 Protein Homology CDS 1 2653 . - 0 ID=cds-WP_224052657.1;Parent=gene-LDO49_RS30190;Dbxref=GenBank:WP_224052657.1;Name=WP_224052657.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478378.1;locus_tag=LDO49_RS30190;partial=true;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_224052657.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000271.1 RefSeq gene 2927 5443 . + . ID=gene-LDO49_RS30195;Name=fixL;gbkey=Gene;gene=fixL;gene_biotype=protein_coding;locus_tag=LDO49_RS30195;old_locus_tag=BCEP4_620002 NZ_CAJZAV010000271.1 Protein Homology CDS 2927 5443 . + 0 ID=cds-WP_042973631.1;Parent=gene-LDO49_RS30195;Dbxref=GenBank:WP_042973631.1;Name=WP_042973631.1;gbkey=CDS;gene=fixL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758934.1;locus_tag=LDO49_RS30195;product=oxygen sensor histidine kinase FixL;protein_id=WP_042973631.1;transl_table=11 NZ_CAJZAV010000271.1 RefSeq gene 5440 6078 . + . ID=gene-LDO49_RS30200;Name=fixJ;gbkey=Gene;gene=fixJ;gene_biotype=protein_coding;locus_tag=LDO49_RS30200;old_locus_tag=BCEP4_620003 NZ_CAJZAV010000271.1 Protein Homology CDS 5440 6078 . + 0 ID=cds-WP_006493245.1;Parent=gene-LDO49_RS30200;Dbxref=GenBank:WP_006493245.1;Name=WP_006493245.1;gbkey=CDS;gene=fixJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698749.1;locus_tag=LDO49_RS30200;product=oxygen response regulator transcription factor FixJ;protein_id=WP_006493245.1;transl_table=11 NZ_CAJZAV010000271.1 RefSeq gene 6323 7183 . + . ID=gene-LDO49_RS30205;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=LDO49_RS30205;old_locus_tag=BCEP4_620004 NZ_CAJZAV010000271.1 Protein Homology CDS 6323 7183 . + 0 ID=cds-WP_060074622.1;Parent=gene-LDO49_RS30205;Dbxref=GenBank:WP_060074622.1;Name=WP_060074622.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352575.1;locus_tag=LDO49_RS30205;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_060074622.1;transl_table=11 NZ_CAJZAV010000271.1 RefSeq gene 7407 9494 . + . ID=gene-LDO49_RS30210;Name=LDO49_RS30210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30210;old_locus_tag=BCEP4_620005 NZ_CAJZAV010000271.1 Protein Homology CDS 7407 9494 . + 0 ID=cds-WP_059649416.1;Parent=gene-LDO49_RS30210;Dbxref=GenBank:WP_059649416.1;Name=WP_059649416.1;Ontology_term=GO:0006508,GO:0004222,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549448.1;locus_tag=LDO49_RS30210;product=M3 family metallopeptidase;protein_id=WP_059649416.1;transl_table=11 NZ_CAJZAV010000271.1 RefSeq gene 9556 10749 . - . ID=gene-LDO49_RS30215;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=LDO49_RS30215;old_locus_tag=BCEP4_620006 NZ_CAJZAV010000271.1 Protein Homology CDS 9556 10749 . - 0 ID=cds-WP_060074623.1;Parent=gene-LDO49_RS30215;Dbxref=GenBank:WP_060074623.1;Name=WP_060074623.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496799.1;locus_tag=LDO49_RS30215;product=DNA polymerase IV;protein_id=WP_060074623.1;transl_table=11 NZ_CAJZAV010000271.1 RefSeq gene 10886 11578 . + . ID=gene-LDO49_RS30220;Name=LDO49_RS30220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30220;old_locus_tag=BCEP4_620007 NZ_CAJZAV010000271.1 Protein Homology CDS 10886 11578 . + 0 ID=cds-WP_060074624.1;Parent=gene-LDO49_RS30220;Dbxref=GenBank:WP_060074624.1;Name=WP_060074624.1;Ontology_term=GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755476.1;locus_tag=LDO49_RS30220;product=aspartate/glutamate racemase family protein;protein_id=WP_060074624.1;transl_table=11 NZ_CAJZAV010000271.1 RefSeq gene 11677 11753 . - . ID=gene-LDO49_RS30225;Name=LDO49_RS30225;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS30225;old_locus_tag=BCEP4_TRNA37 NZ_CAJZAV010000271.1 tRNAscan-SE tRNA 11677 11753 . - . ID=rna-LDO49_RS30225;Parent=gene-LDO49_RS30225;anticodon=(pos:complement(11717..11719));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS30225;product=tRNA-Met NZ_CAJZAV010000271.1 tRNAscan-SE exon 11677 11753 . - . ID=exon-LDO49_RS30225-1;Parent=rna-LDO49_RS30225;anticodon=(pos:complement(11717..11719));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS30225;product=tRNA-Met NZ_CAJZAV010000271.1 RefSeq gene 11937 12713 . + . ID=gene-LDO49_RS30230;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=LDO49_RS30230;old_locus_tag=BCEP4_620008 NZ_CAJZAV010000271.1 Protein Homology CDS 11937 12713 . + 0 ID=cds-WP_021157656.1;Parent=gene-LDO49_RS30230;Dbxref=GenBank:WP_021157656.1;Name=WP_021157656.1;Ontology_term=GO:0006281,GO:0008311;gbkey=CDS;gene=xth;go_function=double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890139.1;locus_tag=LDO49_RS30230;product=exodeoxyribonuclease III;protein_id=WP_021157656.1;transl_table=11 NZ_CAJZAV010000271.1 RefSeq gene 12733 14841 . - . ID=gene-LDO49_RS30235;Name=LDO49_RS30235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30235;old_locus_tag=BCEP4_620009 NZ_CAJZAV010000271.1 Protein Homology CDS 12733 14841 . - 0 ID=cds-WP_060074625.1;Parent=gene-LDO49_RS30235;Dbxref=GenBank:WP_060074625.1;Name=WP_060074625.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478368.1;locus_tag=LDO49_RS30235;product=prolyl oligopeptidase family serine peptidase;protein_id=WP_060074625.1;transl_table=11 NZ_CAJZAV010000271.1 RefSeq gene 14931 16448 . - . ID=gene-LDO49_RS30240;Name=ntrC;gbkey=Gene;gene=ntrC;gene_biotype=protein_coding;locus_tag=LDO49_RS30240;old_locus_tag=BCEP4_620010 NZ_CAJZAV010000271.1 Protein Homology CDS 14931 16448 . - 0 ID=cds-WP_059489171.1;Parent=gene-LDO49_RS30240;Dbxref=GenBank:WP_059489171.1;Name=WP_059489171.1;Ontology_term=GO:0000160,GO:0006808,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;gene=ntrC;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413938.1;locus_tag=LDO49_RS30240;product=nitrogen regulation protein NR(I);protein_id=WP_059489171.1;transl_table=11 NZ_CAJZAV010000271.1 RefSeq gene 16495 17637 . - . ID=gene-LDO49_RS30245;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=LDO49_RS30245;old_locus_tag=BCEP4_620011 NZ_CAJZAV010000271.1 Protein Homology CDS 16495 17637 . - 0 ID=cds-WP_021157653.1;Parent=gene-LDO49_RS30245;Dbxref=GenBank:WP_021157653.1;Name=WP_021157653.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192981.1;locus_tag=LDO49_RS30245;product=nitrogen regulation protein NR(II);protein_id=WP_021157653.1;transl_table=11 NZ_CAJZAV010000271.1 RefSeq gene 17798 19213 . - . ID=gene-LDO49_RS30250;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=LDO49_RS30250;old_locus_tag=BCEP4_620012 NZ_CAJZAV010000271.1 Protein Homology CDS 17798 19213 . - 0 ID=cds-WP_017331833.1;Parent=gene-LDO49_RS30250;Dbxref=GenBank:WP_017331833.1;Name=WP_017331833.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777963.1;locus_tag=LDO49_RS30250;product=type I glutamate--ammonia ligase;protein_id=WP_017331833.1;transl_table=11 NZ_CAJZAV010000271.1 RefSeq gene 19621 20085 . + . ID=gene-LDO49_RS30255;Name=LDO49_RS30255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30255;old_locus_tag=BCEP4_620014 NZ_CAJZAV010000271.1 Protein Homology CDS 19621 20085 . + 0 ID=cds-WP_021157651.1;Parent=gene-LDO49_RS30255;Dbxref=GenBank:WP_021157651.1;Name=WP_021157651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010116266.1;locus_tag=LDO49_RS30255;product=rhodanese-like domain-containing protein;protein_id=WP_021157651.1;transl_table=11 NZ_CAJZAV010000271.1 RefSeq gene 20201 21016 . - . ID=gene-LDO49_RS30260;Name=LDO49_RS30260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30260;old_locus_tag=BCEP4_620015 NZ_CAJZAV010000271.1 Protein Homology CDS 20201 21016 . - 0 ID=cds-WP_059489173.1;Parent=gene-LDO49_RS30260;Dbxref=GenBank:WP_059489173.1;Name=WP_059489173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896604.1;locus_tag=LDO49_RS30260;product=competence/damage-inducible protein A;protein_id=WP_059489173.1;transl_table=11 NZ_CAJZAV010000271.1 RefSeq gene 21013 21840 . - . ID=gene-LDO49_RS30265;Name=LDO49_RS30265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30265;old_locus_tag=BCEP4_620016 NZ_CAJZAV010000271.1 Protein Homology CDS 21013 21840 . - 0 ID=cds-WP_021157649.1;Parent=gene-LDO49_RS30265;Dbxref=GenBank:WP_021157649.1;Name=WP_021157649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478362.1;locus_tag=LDO49_RS30265;product=EI24 domain-containing protein;protein_id=WP_021157649.1;transl_table=11 NZ_CAJZAV010000271.1 RefSeq gene 21952 22926 . - . ID=gene-LDO49_RS30270;Name=LDO49_RS30270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30270;old_locus_tag=BCEP4_620017 NZ_CAJZAV010000271.1 Protein Homology CDS 21952 22926 . - 0 ID=cds-WP_021157648.1;Parent=gene-LDO49_RS30270;Dbxref=GenBank:WP_021157648.1;Name=WP_021157648.1;Ontology_term=GO:0006629,GO:0008610,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=lipid metabolic process|0006629||IEA,lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657401.1;locus_tag=LDO49_RS30270;product=sterol desaturase family protein;protein_id=WP_021157648.1;transl_table=11 NZ_CAJZAV010000271.1 RefSeq gene 22943 23932 . - . ID=gene-LDO49_RS30275;Name=LDO49_RS30275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30275;old_locus_tag=BCEP4_620018 NZ_CAJZAV010000271.1 Protein Homology CDS 22943 23932 . - 0 ID=cds-WP_021157647.1;Parent=gene-LDO49_RS30275;Dbxref=GenBank:WP_021157647.1;Name=WP_021157647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600540.1;locus_tag=LDO49_RS30275;product=YVTN family beta-propeller repeat protein;protein_id=WP_021157647.1;transl_table=11 NZ_CAJZAV010000271.1 RefSeq gene 24114 28319 . - . ID=gene-LDO49_RS30280;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=LDO49_RS30280;old_locus_tag=BCEP4_620019 NZ_CAJZAV010000271.1 Protein Homology CDS 24114 28319 . - 0 ID=cds-WP_060074626.1;Parent=gene-LDO49_RS30280;Dbxref=GenBank:WP_060074626.1;Name=WP_060074626.1;Ontology_term=GO:0003724;gbkey=CDS;gene=hrpA;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544130.1;locus_tag=LDO49_RS30280;product=ATP-dependent RNA helicase HrpA;protein_id=WP_060074626.1;transl_table=11 NZ_CAJZAV010000271.1 RefSeq gene 28343 29722 . + . ID=gene-LDO49_RS30285;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=LDO49_RS30285;old_locus_tag=BCEP4_620020 NZ_CAJZAV010000271.1 Protein Homology CDS 28343 29722 . + 0 ID=cds-WP_027786948.1;Parent=gene-LDO49_RS30285;Dbxref=GenBank:WP_027786948.1;Name=WP_027786948.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602335.1;locus_tag=LDO49_RS30285;product=amino-acid N-acetyltransferase;protein_id=WP_027786948.1;transl_table=11 NZ_CAJZAV010000271.1 RefSeq gene 29773 30048 . + . ID=gene-LDO49_RS30290;Name=LDO49_RS30290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30290;old_locus_tag=BCEP4_620021 NZ_CAJZAV010000271.1 Protein Homology CDS 29773 30048 . + 0 ID=cds-WP_006478357.1;Parent=gene-LDO49_RS30290;Dbxref=GenBank:WP_006478357.1;Name=WP_006478357.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401987.1;locus_tag=LDO49_RS30290;product=oxidative damage protection protein;protein_id=WP_006478357.1;transl_table=11 NZ_CAJZAV010000271.1 RefSeq gene 30188 31654 . - . ID=gene-LDO49_RS30295;Name=LDO49_RS30295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30295;old_locus_tag=BCEP4_620022 NZ_CAJZAV010000271.1 Protein Homology CDS 30188 31654 . - 0 ID=cds-WP_224052658.1;Parent=gene-LDO49_RS30295;Dbxref=GenBank:WP_224052658.1;Name=WP_224052658.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352595.1;locus_tag=LDO49_RS30295;product=MFS transporter;protein_id=WP_224052658.1;transl_table=11 NZ_CAJZAV010000271.1 RefSeq gene 31744 32517 . - . ID=gene-LDO49_RS30300;Name=LDO49_RS30300;end_range=32517,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30300;old_locus_tag=BCEP4_620023;partial=true NZ_CAJZAV010000271.1 Protein Homology CDS 31744 32517 . - 0 ID=cds-WP_443798016.1;Parent=gene-LDO49_RS30300;Dbxref=GenBank:WP_443798016.1;Name=WP_443798016.1;Ontology_term=GO:0003824;end_range=32517,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549435.1;locus_tag=LDO49_RS30300;partial=true;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_443798016.1;transl_table=11 NZ_CAJZAV010000271.1 RefSeq gene 32528 32759 . - . ID=gene-LDO49_RS38360;Name=LDO49_RS38360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38360;old_locus_tag=BCEP4_620024;partial=true;start_range=.,32528 NZ_CAJZAV010000271.1 Protein Homology CDS 32528 32759 . - 0 ID=cds-WP_443798017.1;Parent=gene-LDO49_RS38360;Dbxref=GenBank:WP_443798017.1;Name=WP_443798017.1;Ontology_term=GO:0003824,GO:0008410;gbkey=CDS;go_function=catalytic activity|0003824||IEA,CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401989.1;locus_tag=LDO49_RS38360;partial=true;product=CoA transferase;protein_id=WP_443798017.1;start_range=.,32528;transl_table=11 ##sequence-region NZ_CAJZAV010000272.1 1 105043 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000272.1 RefSeq region 1 105043 . + . ID=NZ_CAJZAV010000272.1:1..105043;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_63 NZ_CAJZAV010000272.1 RefSeq gene 176 1446 . - . ID=gene-LDO49_RS30305;Name=LDO49_RS30305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30305;old_locus_tag=BCEP4_630002;partial=true;start_range=.,176 NZ_CAJZAV010000272.1 Protein Homology CDS 176 1446 . - 0 ID=cds-WP_224052659.1;Parent=gene-LDO49_RS30305;Dbxref=GenBank:WP_224052659.1;Name=WP_224052659.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004546848.1;locus_tag=LDO49_RS30305;partial=true;product=hemolysin family protein;protein_id=WP_224052659.1;start_range=.,176;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 1523 2302 . - . ID=gene-LDO49_RS30310;Name=LDO49_RS30310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30310;old_locus_tag=BCEP4_630003 NZ_CAJZAV010000272.1 Protein Homology CDS 1523 2302 . - 0 ID=cds-WP_224052660.1;Parent=gene-LDO49_RS30310;Dbxref=GenBank:WP_224052660.1;Name=WP_224052660.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497274.1;locus_tag=LDO49_RS30310;product=sensor histidine kinase;protein_id=WP_224052660.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 2370 3293 . - . ID=gene-LDO49_RS30315;Name=LDO49_RS30315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30315;old_locus_tag=BCEP4_630004 NZ_CAJZAV010000272.1 Protein Homology CDS 2370 3293 . - 0 ID=cds-WP_224052661.1;Parent=gene-LDO49_RS30315;Dbxref=GenBank:WP_224052661.1;Name=WP_224052661.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410288.1;locus_tag=LDO49_RS30315;product=DMT family transporter;protein_id=WP_224052661.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 3335 4192 . - . ID=gene-LDO49_RS30320;Name=LDO49_RS30320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30320;old_locus_tag=BCEP4_630005 NZ_CAJZAV010000272.1 Protein Homology CDS 3335 4192 . - 0 ID=cds-WP_224052662.1;Parent=gene-LDO49_RS30320;Dbxref=GenBank:WP_224052662.1;Name=WP_224052662.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493188.1;locus_tag=LDO49_RS30320;product=LysR family transcriptional regulator;protein_id=WP_224052662.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 4320 4703 . + . ID=gene-LDO49_RS30325;Name=LDO49_RS30325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30325;old_locus_tag=BCEP4_630006 NZ_CAJZAV010000272.1 Protein Homology CDS 4320 4703 . + 0 ID=cds-WP_224052663.1;Parent=gene-LDO49_RS30325;Dbxref=GenBank:WP_224052663.1;Name=WP_224052663.1;Ontology_term=GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479459.1;locus_tag=LDO49_RS30325;product=tautomerase family protein;protein_id=WP_224052663.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 4833 6449 . + . ID=gene-LDO49_RS30330;Name=LDO49_RS30330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30330;old_locus_tag=BCEP4_630007 NZ_CAJZAV010000272.1 Protein Homology CDS 4833 6449 . + 0 ID=cds-WP_224052664.1;Parent=gene-LDO49_RS30330;Dbxref=GenBank:WP_224052664.1;Name=WP_224052664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548166.1;locus_tag=LDO49_RS30330;product=CHAD domain-containing protein;protein_id=WP_224052664.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 6526 7362 . + . ID=gene-LDO49_RS30335;Name=LDO49_RS30335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30335;old_locus_tag=BCEP4_630008 NZ_CAJZAV010000272.1 Protein Homology CDS 6526 7362 . + 0 ID=cds-WP_224052665.1;Parent=gene-LDO49_RS30335;Dbxref=GenBank:WP_224052665.1;Name=WP_224052665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338495.1;locus_tag=LDO49_RS30335;product=TOBE domain-containing protein;protein_id=WP_224052665.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 7538 8239 . - . ID=gene-LDO49_RS30340;Name=LDO49_RS30340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30340;old_locus_tag=BCEP4_630009 NZ_CAJZAV010000272.1 Protein Homology CDS 7538 8239 . - 0 ID=cds-WP_021156294.1;Parent=gene-LDO49_RS30340;Dbxref=GenBank:WP_021156294.1;Name=WP_021156294.1;Ontology_term=GO:0005524,GO:0015419,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900039.1;locus_tag=LDO49_RS30340;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=WP_021156294.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 8295 8972 . - . ID=gene-LDO49_RS30345;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=LDO49_RS30345;old_locus_tag=BCEP4_630010 NZ_CAJZAV010000272.1 Protein Homology CDS 8295 8972 . - 0 ID=cds-WP_224052666.1;Parent=gene-LDO49_RS30345;Dbxref=GenBank:WP_224052666.1;Name=WP_224052666.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479455.1;locus_tag=LDO49_RS30345;product=molybdate ABC transporter permease subunit;protein_id=WP_224052666.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 8983 9780 . - . ID=gene-LDO49_RS30350;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=LDO49_RS30350;old_locus_tag=BCEP4_630011 NZ_CAJZAV010000272.1 Protein Homology CDS 8983 9780 . - 0 ID=cds-WP_224052667.1;Parent=gene-LDO49_RS30350;Dbxref=GenBank:WP_224052667.1;Name=WP_224052667.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753392.1;locus_tag=LDO49_RS30350;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_224052667.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 9911 10609 . - . ID=gene-LDO49_RS30355;Name=LDO49_RS30355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30355;old_locus_tag=BCEP4_630012 NZ_CAJZAV010000272.1 Protein Homology CDS 9911 10609 . - 0 ID=cds-WP_021156291.1;Parent=gene-LDO49_RS30355;Dbxref=GenBank:WP_021156291.1;Name=WP_021156291.1;Ontology_term=GO:0008610,GO:0016311,GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;go_process=lipid biosynthetic process|0008610||IEA,dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414610.1;locus_tag=LDO49_RS30355;product=phosphatase PAP2 family protein;protein_id=WP_021156291.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 10858 11967 . + . ID=gene-LDO49_RS30360;Name=LDO49_RS30360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30360;old_locus_tag=BCEP4_630013 NZ_CAJZAV010000272.1 Protein Homology CDS 10858 11967 . + 0 ID=cds-WP_048022279.1;Parent=gene-LDO49_RS30360;Dbxref=GenBank:WP_048022279.1;Name=WP_048022279.1;Ontology_term=GO:0050526;gbkey=CDS;go_function=poly(3-hydroxybutyrate) depolymerase activity|0050526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658279.1;locus_tag=LDO49_RS30360;product=extracellular catalytic domain type 1 short-chain-length polyhydroxyalkanoate depolymerase;protein_id=WP_048022279.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 12049 12225 . + . ID=gene-LDO49_RS30365;Name=LDO49_RS30365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30365;old_locus_tag=BCEP4_630014 NZ_CAJZAV010000272.1 Protein Homology CDS 12049 12225 . + 0 ID=cds-WP_021156289.1;Parent=gene-LDO49_RS30365;Dbxref=GenBank:WP_021156289.1;Name=WP_021156289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330147.1;locus_tag=LDO49_RS30365;product=DUF3563 family protein;protein_id=WP_021156289.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 12339 12758 . - . ID=gene-LDO49_RS30370;Name=LDO49_RS30370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30370;old_locus_tag=BCEP4_630015 NZ_CAJZAV010000272.1 Protein Homology CDS 12339 12758 . - 0 ID=cds-WP_059649103.1;Parent=gene-LDO49_RS30370;Dbxref=GenBank:WP_059649103.1;Name=WP_059649103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900033.1;locus_tag=LDO49_RS30370;product=organic hydroperoxide resistance protein;protein_id=WP_059649103.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 12915 13367 . - . ID=gene-LDO49_RS30375;Name=LDO49_RS30375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30375;old_locus_tag=BCEP4_630016 NZ_CAJZAV010000272.1 Protein Homology CDS 12915 13367 . - 0 ID=cds-WP_042972655.1;Parent=gene-LDO49_RS30375;Dbxref=GenBank:WP_042972655.1;Name=WP_042972655.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414605.1;locus_tag=LDO49_RS30375;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_042972655.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 13557 14366 . - . ID=gene-LDO49_RS30380;Name=LDO49_RS30380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30380;old_locus_tag=BCEP4_630017 NZ_CAJZAV010000272.1 Protein Homology CDS 13557 14366 . - 0 ID=cds-WP_021160836.1;Parent=gene-LDO49_RS30380;Dbxref=GenBank:WP_021160836.1;Name=WP_021160836.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496010.1;locus_tag=LDO49_RS30380;product=BPSS1780 family membrane protein;protein_id=WP_021160836.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 14357 15355 . - . ID=gene-LDO49_RS30385;Name=LDO49_RS30385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30385;old_locus_tag=BCEP4_630018 NZ_CAJZAV010000272.1 Protein Homology CDS 14357 15355 . - 0 ID=cds-WP_059484080.1;Parent=gene-LDO49_RS30385;Dbxref=GenBank:WP_059484080.1;Name=WP_059484080.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254414.1;locus_tag=LDO49_RS30385;product=homoserine kinase;protein_id=WP_059484080.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 15457 15852 . - . ID=gene-LDO49_RS30390;Name=LDO49_RS30390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30390;old_locus_tag=BCEP4_630020 NZ_CAJZAV010000272.1 Protein Homology CDS 15457 15852 . - 0 ID=cds-WP_224052668.1;Parent=gene-LDO49_RS30390;Dbxref=GenBank:WP_224052668.1;Name=WP_224052668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010110125.1;locus_tag=LDO49_RS30390;product=hypothetical protein;protein_id=WP_224052668.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 15982 17508 . + . ID=gene-LDO49_RS30395;Name=LDO49_RS30395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30395;old_locus_tag=BCEP4_630019 NZ_CAJZAV010000272.1 Protein Homology CDS 15982 17508 . + 0 ID=cds-WP_021160839.1;Parent=gene-LDO49_RS30395;Dbxref=GenBank:WP_021160839.1;Name=WP_021160839.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529041.1;locus_tag=LDO49_RS30395;product=AMP nucleosidase;protein_id=WP_021160839.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 18119 18682 . - . ID=gene-LDO49_RS30400;Name=LDO49_RS30400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30400;old_locus_tag=BCEP4_630023 NZ_CAJZAV010000272.1 Protein Homology CDS 18119 18682 . - 0 ID=cds-WP_059706407.1;Parent=gene-LDO49_RS30400;Dbxref=GenBank:WP_059706407.1;Name=WP_059706407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900027.1;locus_tag=LDO49_RS30400;product=tautomerase family protein;protein_id=WP_059706407.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 18832 19824 . - . ID=gene-LDO49_RS30405;Name=LDO49_RS30405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30405;old_locus_tag=BCEP4_630024 NZ_CAJZAV010000272.1 Protein Homology CDS 18832 19824 . - 0 ID=cds-WP_224052669.1;Parent=gene-LDO49_RS30405;Dbxref=GenBank:WP_224052669.1;Name=WP_224052669.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026102.1;locus_tag=LDO49_RS30405;product=GlxA family transcriptional regulator;protein_id=WP_224052669.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 20057 20365 . - . ID=gene-LDO49_RS30410;Name=LDO49_RS30410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30410;old_locus_tag=BCEP4_630025 NZ_CAJZAV010000272.1 Protein Homology CDS 20057 20365 . - 0 ID=cds-WP_021160843.1;Parent=gene-LDO49_RS30410;Dbxref=GenBank:WP_021160843.1;Name=WP_021160843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900025.1;locus_tag=LDO49_RS30410;product=hypothetical protein;protein_id=WP_021160843.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 20757 21515 . - . ID=gene-LDO49_RS30415;Name=LDO49_RS30415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30415;old_locus_tag=BCEP4_630026 NZ_CAJZAV010000272.1 Protein Homology CDS 20757 21515 . - 0 ID=cds-WP_048022163.1;Parent=gene-LDO49_RS30415;Dbxref=GenBank:WP_048022163.1;Name=WP_048022163.1;Ontology_term=GO:0009691,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881579.1;locus_tag=LDO49_RS30415;product=TIGR00730 family Rossman fold protein;protein_id=WP_048022163.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 21517 24270 . + . ID=gene-LDO49_RS30420;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=LDO49_RS30420;old_locus_tag=BCEP4_630027 NZ_CAJZAV010000272.1 Protein Homology CDS 21517 24270 . + 0 ID=cds-WP_048022161.1;Parent=gene-LDO49_RS30420;Dbxref=GenBank:WP_048022161.1;Name=WP_048022161.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761695.1;locus_tag=LDO49_RS30420;product=DNA polymerase I;protein_id=WP_048022161.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 24542 25876 . + . ID=gene-LDO49_RS30425;Name=LDO49_RS30425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30425;old_locus_tag=BCEP4_630028 NZ_CAJZAV010000272.1 Protein Homology CDS 24542 25876 . + 0 ID=cds-WP_042975832.1;Parent=gene-LDO49_RS30425;Dbxref=GenBank:WP_042975832.1;Name=WP_042975832.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190401.1;locus_tag=LDO49_RS30425;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_042975832.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 26291 27166 . + . ID=gene-LDO49_RS30430;Name=LDO49_RS30430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30430;old_locus_tag=BCEP4_630029 NZ_CAJZAV010000272.1 Protein Homology CDS 26291 27166 . + 0 ID=cds-WP_021160848.1;Parent=gene-LDO49_RS30430;Dbxref=GenBank:WP_021160848.1;Name=WP_021160848.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414604.1;locus_tag=LDO49_RS30430;product=dienelactone hydrolase family protein;protein_id=WP_021160848.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 27210 28079 . - . ID=gene-LDO49_RS30435;Name=LDO49_RS30435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30435;old_locus_tag=BCEP4_630030 NZ_CAJZAV010000272.1 Protein Homology CDS 27210 28079 . - 0 ID=cds-WP_021160849.1;Parent=gene-LDO49_RS30435;Dbxref=GenBank:WP_021160849.1;Name=WP_021160849.1;Ontology_term=GO:0000098,GO:0016783;gbkey=CDS;go_function=sulfurtransferase activity|0016783||IEA;go_process=sulfur amino acid catabolic process|0000098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529026.1;locus_tag=LDO49_RS30435;product=sulfurtransferase;protein_id=WP_021160849.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 28197 29303 . - . ID=gene-LDO49_RS30440;Name=LDO49_RS30440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30440;old_locus_tag=BCEP4_630032 NZ_CAJZAV010000272.1 Protein Homology CDS 28197 29303 . - 0 ID=cds-WP_048022159.1;Parent=gene-LDO49_RS30440;Dbxref=GenBank:WP_048022159.1;Name=WP_048022159.1;Ontology_term=GO:0005506,GO:0016705,GO:0051537;gbkey=CDS;go_function=iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027818.1;locus_tag=LDO49_RS30440;product=aromatic ring-hydroxylating oxygenase subunit alpha;protein_id=WP_048022159.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 29574 29867 . + . ID=gene-LDO49_RS30445;Name=LDO49_RS30445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30445;old_locus_tag=BCEP4_630033 NZ_CAJZAV010000272.1 Protein Homology CDS 29574 29867 . + 0 ID=cds-WP_011355806.1;Parent=gene-LDO49_RS30445;Dbxref=GenBank:WP_011355806.1;Name=WP_011355806.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399451.1;locus_tag=LDO49_RS30445;product=exodeoxyribonuclease VII small subunit;protein_id=WP_011355806.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 29864 30748 . + . ID=gene-LDO49_RS30450;Name=LDO49_RS30450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30450;old_locus_tag=BCEP4_630034 NZ_CAJZAV010000272.1 Protein Homology CDS 29864 30748 . + 0 ID=cds-WP_042975833.1;Parent=gene-LDO49_RS30450;Dbxref=GenBank:WP_042975833.1;Name=WP_042975833.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486453.1;locus_tag=LDO49_RS30450;product=polyprenyl synthetase family protein;protein_id=WP_042975833.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 30830 32734 . + . ID=gene-LDO49_RS30455;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=LDO49_RS30455;old_locus_tag=BCEP4_630035 NZ_CAJZAV010000272.1 Protein Homology CDS 30830 32734 . + 0 ID=cds-WP_021160852.1;Parent=gene-LDO49_RS30455;Dbxref=GenBank:WP_021160852.1;Name=WP_021160852.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338492.1;locus_tag=LDO49_RS30455;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_021160852.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 32889 33698 . + . ID=gene-LDO49_RS30460;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=LDO49_RS30460;old_locus_tag=BCEP4_630036 NZ_CAJZAV010000272.1 Protein Homology CDS 32889 33698 . + 0 ID=cds-WP_060224615.1;Parent=gene-LDO49_RS30460;Dbxref=GenBank:WP_060224615.1;Name=WP_060224615.1;Ontology_term=GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760425.1;locus_tag=LDO49_RS30460;product=GTP cyclohydrolase FolE2;protein_id=WP_060224615.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 33790 34830 . - . ID=gene-LDO49_RS30465;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=LDO49_RS30465;old_locus_tag=BCEP4_630037 NZ_CAJZAV010000272.1 Protein Homology CDS 33790 34830 . - 0 ID=cds-WP_224052670.1;Parent=gene-LDO49_RS30465;Dbxref=GenBank:WP_224052670.1;Name=WP_224052670.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027813.1;locus_tag=LDO49_RS30465;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_224052670.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 34961 36181 . + . ID=gene-LDO49_RS30470;Name=LDO49_RS30470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30470;old_locus_tag=BCEP4_630038 NZ_CAJZAV010000272.1 Protein Homology CDS 34961 36181 . + 0 ID=cds-WP_021160854.1;Parent=gene-LDO49_RS30470;Dbxref=GenBank:WP_021160854.1;Name=WP_021160854.1;Ontology_term=GO:0000166,GO:0050660,GO:0050661;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496002.1;locus_tag=LDO49_RS30470;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_021160854.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 36288 36500 . + . ID=gene-LDO49_RS30475;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LDO49_RS30475;old_locus_tag=BCEP4_630039 NZ_CAJZAV010000272.1 Protein Homology CDS 36288 36500 . + 0 ID=cds-WP_006479415.1;Parent=gene-LDO49_RS30475;Dbxref=GenBank:WP_006479415.1;Name=WP_006479415.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011903537.1;locus_tag=LDO49_RS30475;product=30S ribosomal protein S21;protein_id=WP_006479415.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 36711 37157 . + . ID=gene-LDO49_RS30480;Name=LDO49_RS30480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30480;old_locus_tag=BCEP4_630040 NZ_CAJZAV010000272.1 Protein Homology CDS 36711 37157 . + 0 ID=cds-WP_021160855.1;Parent=gene-LDO49_RS30480;Dbxref=GenBank:WP_021160855.1;Name=WP_021160855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900012.1;locus_tag=LDO49_RS30480;product=GatB/YqeY domain-containing protein;protein_id=WP_021160855.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 37228 39102 . + . ID=gene-LDO49_RS30485;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=LDO49_RS30485;old_locus_tag=BCEP4_630041 NZ_CAJZAV010000272.1 Protein Homology CDS 37228 39102 . + 0 ID=cds-WP_059554647.1;Parent=gene-LDO49_RS30485;Dbxref=GenBank:WP_059554647.1;Name=WP_059554647.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765502.1;locus_tag=LDO49_RS30485;product=DNA primase;protein_id=WP_059554647.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 39191 41611 . + . ID=gene-LDO49_RS30490;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=LDO49_RS30490;old_locus_tag=BCEP4_630042 NZ_CAJZAV010000272.1 Protein Homology CDS 39191 41611 . + 0 ID=cds-WP_081052572.1;Parent=gene-LDO49_RS30490;Dbxref=GenBank:WP_081052572.1;Name=WP_081052572.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658300.1;locus_tag=LDO49_RS30490;product=RNA polymerase sigma factor RpoD;protein_id=WP_081052572.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 41741 41816 . + . ID=gene-LDO49_RS30495;Name=LDO49_RS30495;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS30495;old_locus_tag=BCEP4_TRNA15 NZ_CAJZAV010000272.1 tRNAscan-SE tRNA 41741 41816 . + . ID=rna-LDO49_RS30495;Parent=gene-LDO49_RS30495;anticodon=(pos:41774..41776);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS30495;product=tRNA-Ile NZ_CAJZAV010000272.1 tRNAscan-SE exon 41741 41816 . + . ID=exon-LDO49_RS30495-1;Parent=rna-LDO49_RS30495;anticodon=(pos:41774..41776);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS30495;product=tRNA-Ile NZ_CAJZAV010000272.1 RefSeq gene 42070 43620 . + . ID=gene-LDO49_RS30500;Name=LDO49_RS30500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30500;old_locus_tag=BCEP4_630043 NZ_CAJZAV010000272.1 Protein Homology CDS 42070 43620 . + 0 ID=cds-WP_060071391.1;Parent=gene-LDO49_RS30500;Dbxref=GenBank:WP_060071391.1;Name=WP_060071391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365645.1;locus_tag=LDO49_RS30500;product=phospholipase D family protein;protein_id=WP_060071391.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 43643 45109 . - . ID=gene-LDO49_RS30505;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=LDO49_RS30505;old_locus_tag=BCEP4_630044 NZ_CAJZAV010000272.1 Protein Homology CDS 43643 45109 . - 0 ID=cds-WP_060071396.1;Parent=gene-LDO49_RS30505;Dbxref=GenBank:WP_060071396.1;Name=WP_060071396.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355796.1;locus_tag=LDO49_RS30505;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_060071396.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 45424 46074 . + . ID=gene-LDO49_RS30510;Name=LDO49_RS30510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30510;old_locus_tag=BCEP4_630045 NZ_CAJZAV010000272.1 Protein Homology CDS 45424 46074 . + 0 ID=cds-WP_059621868.1;Parent=gene-LDO49_RS30510;Dbxref=GenBank:WP_059621868.1;Name=WP_059621868.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489063.1;locus_tag=LDO49_RS30510;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_059621868.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 46439 48271 . - . ID=gene-LDO49_RS30515;Name=LDO49_RS30515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30515;old_locus_tag=BCEP4_630046 NZ_CAJZAV010000272.1 Protein Homology CDS 46439 48271 . - 0 ID=cds-WP_060071399.1;Parent=gene-LDO49_RS30515;Dbxref=GenBank:WP_060071399.1;Name=WP_060071399.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489048.1;locus_tag=LDO49_RS30515;product=S53 family peptidase;protein_id=WP_060071399.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq pseudogene 48940 49065 . + . ID=gene-LDO49_RS30520;Name=LDO49_RS30520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS30520;partial=true;pseudo=true;start_range=.,48940 NZ_CAJZAV010000272.1 Protein Homology CDS 48940 49065 . + 0 ID=cds-LDO49_RS30520;Parent=gene-LDO49_RS30520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000572405.1;locus_tag=LDO49_RS30520;partial=true;product=APH(3') family aminoglycoside O-phosphotransferase;pseudo=true;start_range=.,48940;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 49181 50668 . - . ID=gene-LDO49_RS30525;Name=LDO49_RS30525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30525;old_locus_tag=BCEP4_630048 NZ_CAJZAV010000272.1 Protein Homology CDS 49181 50668 . - 0 ID=cds-WP_060071405.1;Parent=gene-LDO49_RS30525;Dbxref=GenBank:WP_060071405.1;Name=WP_060071405.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479390.1;locus_tag=LDO49_RS30525;product=efflux transporter outer membrane subunit;protein_id=WP_060071405.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 50682 52268 . - . ID=gene-LDO49_RS30530;Name=LDO49_RS30530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30530;old_locus_tag=BCEP4_630049 NZ_CAJZAV010000272.1 Protein Homology CDS 50682 52268 . - 0 ID=cds-WP_021160866.1;Parent=gene-LDO49_RS30530;Dbxref=GenBank:WP_021160866.1;Name=WP_021160866.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658318.1;locus_tag=LDO49_RS30530;product=MDR family MFS transporter;protein_id=WP_021160866.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 52261 53406 . - . ID=gene-LDO49_RS30535;Name=LDO49_RS30535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30535;old_locus_tag=BCEP4_630050 NZ_CAJZAV010000272.1 Protein Homology CDS 52261 53406 . - 0 ID=cds-WP_060071408.1;Parent=gene-LDO49_RS30535;Dbxref=GenBank:WP_060071408.1;Name=WP_060071408.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404072.1;locus_tag=LDO49_RS30535;product=HlyD family secretion protein;protein_id=WP_060071408.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 53499 54338 . + . ID=gene-LDO49_RS30540;Name=LDO49_RS30540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30540;old_locus_tag=BCEP4_630051 NZ_CAJZAV010000272.1 Protein Homology CDS 53499 54338 . + 0 ID=cds-WP_059649092.1;Parent=gene-LDO49_RS30540;Dbxref=GenBank:WP_059649092.1;Name=WP_059649092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355784.1;locus_tag=LDO49_RS30540;product=CerR family C-terminal domain-containing protein;protein_id=WP_059649092.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 54366 56858 . - . ID=gene-LDO49_RS30545;Name=LDO49_RS30545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30545;old_locus_tag=BCEP4_630052 NZ_CAJZAV010000272.1 Protein Homology CDS 54366 56858 . - 0 ID=cds-WP_060071412.1;Parent=gene-LDO49_RS30545;Dbxref=GenBank:WP_060071412.1;Name=WP_060071412.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548128.1;locus_tag=LDO49_RS30545;product=mechanosensitive ion channel family protein;protein_id=WP_060071412.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 57144 58103 . - . ID=gene-LDO49_RS30550;Name=LDO49_RS30550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30550;old_locus_tag=BCEP4_630053 NZ_CAJZAV010000272.1 Protein Homology CDS 57144 58103 . - 0 ID=cds-WP_021160872.1;Parent=gene-LDO49_RS30550;Dbxref=GenBank:WP_021160872.1;Name=WP_021160872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548127.1;locus_tag=LDO49_RS30550;product=LLM class oxidoreductase;protein_id=WP_021160872.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 58302 58700 . + . ID=gene-LDO49_RS30555;Name=LDO49_RS30555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30555;old_locus_tag=BCEP4_630054 NZ_CAJZAV010000272.1 Protein Homology CDS 58302 58700 . + 0 ID=cds-WP_060071414.1;Parent=gene-LDO49_RS30555;Dbxref=GenBank:WP_060071414.1;Name=WP_060071414.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018684.6;locus_tag=LDO49_RS30555;product=lysozyme inhibitor LprI family protein;protein_id=WP_060071414.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 58722 59453 . - . ID=gene-LDO49_RS30560;Name=LDO49_RS30560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30560;old_locus_tag=BCEP4_630055 NZ_CAJZAV010000272.1 Protein Homology CDS 58722 59453 . - 0 ID=cds-WP_059674984.1;Parent=gene-LDO49_RS30560;Dbxref=GenBank:WP_059674984.1;Name=WP_059674984.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355780.1;locus_tag=LDO49_RS30560;product=GNAT family N-acetyltransferase;protein_id=WP_059674984.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 60501 61397 . + . ID=gene-LDO49_RS30565;Name=LDO49_RS30565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30565;old_locus_tag=BCEP4_630059 NZ_CAJZAV010000272.1 Protein Homology CDS 60501 61397 . + 0 ID=cds-WP_042975845.1;Parent=gene-LDO49_RS30565;Dbxref=GenBank:WP_042975845.1;Name=WP_042975845.1;Ontology_term=GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658326.1;locus_tag=LDO49_RS30565;product=NAD-dependent protein deacetylase;protein_id=WP_042975845.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 61394 62035 . + . ID=gene-LDO49_RS30570;Name=LDO49_RS30570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30570;old_locus_tag=BCEP4_630057 NZ_CAJZAV010000272.1 Protein Homology CDS 61394 62035 . + 0 ID=cds-WP_027791097.1;Parent=gene-LDO49_RS30570;Dbxref=GenBank:WP_027791097.1;Name=WP_027791097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881689.1;locus_tag=LDO49_RS30570;product=DUF938 domain-containing protein;protein_id=WP_027791097.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 62133 63545 . + . ID=gene-LDO49_RS30575;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=LDO49_RS30575;old_locus_tag=BCEP4_630060 NZ_CAJZAV010000272.1 Protein Homology CDS 62133 63545 . + 0 ID=cds-WP_021160879.1;Parent=gene-LDO49_RS30575;Dbxref=GenBank:WP_021160879.1;Name=WP_021160879.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899993.1;locus_tag=LDO49_RS30575;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_021160879.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 63746 64090 . + . ID=gene-LDO49_RS30580;Name=LDO49_RS30580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30580;old_locus_tag=BCEP4_630061 NZ_CAJZAV010000272.1 Protein Homology CDS 63746 64090 . + 0 ID=cds-WP_021160880.1;Parent=gene-LDO49_RS30580;Dbxref=GenBank:WP_021160880.1;Name=WP_021160880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399511.1;locus_tag=LDO49_RS30580;product=DUF4148 domain-containing protein;protein_id=WP_021160880.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 64221 64541 . - . ID=gene-LDO49_RS30585;Name=LDO49_RS30585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30585;old_locus_tag=BCEP4_630062 NZ_CAJZAV010000272.1 Protein Homology CDS 64221 64541 . - 0 ID=cds-WP_060071417.1;Parent=gene-LDO49_RS30585;Dbxref=GenBank:WP_060071417.1;Name=WP_060071417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760526.1;locus_tag=LDO49_RS30585;product=hypothetical protein;protein_id=WP_060071417.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 64954 65688 . + . ID=gene-LDO49_RS30590;Name=LDO49_RS30590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30590;old_locus_tag=BCEP4_630063 NZ_CAJZAV010000272.1 Protein Homology CDS 64954 65688 . + 0 ID=cds-WP_059484066.1;Parent=gene-LDO49_RS30590;Dbxref=GenBank:WP_059484066.1;Name=WP_059484066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495975.1;locus_tag=LDO49_RS30590;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_059484066.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 65746 66384 . - . ID=gene-LDO49_RS30595;Name=LDO49_RS30595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30595;old_locus_tag=BCEP4_630064 NZ_CAJZAV010000272.1 Protein Homology CDS 65746 66384 . - 0 ID=cds-WP_027791100.1;Parent=gene-LDO49_RS30595;Dbxref=GenBank:WP_027791100.1;Name=WP_027791100.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404060.1;locus_tag=LDO49_RS30595;product=Pr6Pr family membrane protein;protein_id=WP_027791100.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 66616 67152 . + . ID=gene-LDO49_RS30600;Name=LDO49_RS30600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30600;old_locus_tag=BCEP4_630065 NZ_CAJZAV010000272.1 Protein Homology CDS 66616 67152 . + 0 ID=cds-WP_048022125.1;Parent=gene-LDO49_RS30600;Dbxref=GenBank:WP_048022125.1;Name=WP_048022125.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483770.1;locus_tag=LDO49_RS30600;product=cytochrome b;protein_id=WP_048022125.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 67312 67680 . + . ID=gene-LDO49_RS30605;Name=LDO49_RS30605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30605;old_locus_tag=BCEP4_630066 NZ_CAJZAV010000272.1 Protein Homology CDS 67312 67680 . + 0 ID=cds-WP_059706385.1;Parent=gene-LDO49_RS30605;Dbxref=GenBank:WP_059706385.1;Name=WP_059706385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548121.1;locus_tag=LDO49_RS30605;product=DUF2946 domain-containing protein;protein_id=WP_059706385.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 67764 69896 . + . ID=gene-LDO49_RS30610;Name=LDO49_RS30610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30610;old_locus_tag=BCEP4_630067 NZ_CAJZAV010000272.1 Protein Homology CDS 67764 69896 . + 0 ID=cds-WP_060071420.1;Parent=gene-LDO49_RS30610;Dbxref=GenBank:WP_060071420.1;Name=WP_060071420.1;Ontology_term=GO:0006825,GO:0005375,GO:0005507,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=copper ion transmembrane transporter activity|0005375||IEA,copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548120.1;locus_tag=LDO49_RS30610;product=TonB-dependent copper receptor;protein_id=WP_060071420.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 70125 71219 . + . ID=gene-LDO49_RS30615;Name=LDO49_RS30615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30615;old_locus_tag=BCEP4_630068 NZ_CAJZAV010000272.1 Protein Homology CDS 70125 71219 . + 0 ID=cds-WP_048022119.1;Parent=gene-LDO49_RS30615;Dbxref=GenBank:WP_048022119.1;Name=WP_048022119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754864.1;locus_tag=LDO49_RS30615;product=triacylglycerol lipase;protein_id=WP_048022119.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 71223 72257 . + . ID=gene-LDO49_RS30620;Name=LDO49_RS30620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30620;old_locus_tag=BCEP4_630069 NZ_CAJZAV010000272.1 Protein Homology CDS 71223 72257 . + 0 ID=cds-WP_224052671.1;Parent=gene-LDO49_RS30620;Dbxref=GenBank:WP_224052671.1;Name=WP_224052671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365663.1;locus_tag=LDO49_RS30620;product=lipase secretion chaperone;protein_id=WP_224052671.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 72294 73817 . - . ID=gene-LDO49_RS30625;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=LDO49_RS30625;old_locus_tag=BCEP4_630070 NZ_CAJZAV010000272.1 Protein Homology CDS 72294 73817 . - 0 ID=cds-WP_060071423.1;Parent=gene-LDO49_RS30625;Dbxref=GenBank:WP_060071423.1;Name=WP_060071423.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495971.1;locus_tag=LDO49_RS30625;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_060071423.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 73926 75032 . + . ID=gene-LDO49_RS30630;Name=LDO49_RS30630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30630;old_locus_tag=BCEP4_630071 NZ_CAJZAV010000272.1 Protein Homology CDS 73926 75032 . + 0 ID=cds-WP_042974229.1;Parent=gene-LDO49_RS30630;Dbxref=GenBank:WP_042974229.1;Name=WP_042974229.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479371.1;locus_tag=LDO49_RS30630;product=ABC transporter ATP-binding protein;protein_id=WP_042974229.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 75110 76156 . + . ID=gene-LDO49_RS30635;Name=LDO49_RS30635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30635;old_locus_tag=BCEP4_630072 NZ_CAJZAV010000272.1 Protein Homology CDS 75110 76156 . + 0 ID=cds-WP_021158689.1;Parent=gene-LDO49_RS30635;Dbxref=GenBank:WP_021158689.1;Name=WP_021158689.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753702.1;locus_tag=LDO49_RS30635;product=ABC transporter substrate-binding protein;protein_id=WP_021158689.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 76267 77523 . + . ID=gene-LDO49_RS30640;Name=LDO49_RS30640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30640;old_locus_tag=BCEP4_630073 NZ_CAJZAV010000272.1 Protein Homology CDS 76267 77523 . + 0 ID=cds-WP_224052675.1;Parent=gene-LDO49_RS30640;Dbxref=GenBank:WP_224052675.1;Name=WP_224052675.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196172.1;locus_tag=LDO49_RS30640;product=ABC transporter permease;protein_id=WP_224052675.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 77561 78397 . + . ID=gene-LDO49_RS30645;Name=LDO49_RS30645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30645;old_locus_tag=BCEP4_630074 NZ_CAJZAV010000272.1 Protein Homology CDS 77561 78397 . + 0 ID=cds-WP_224052672.1;Parent=gene-LDO49_RS30645;Dbxref=GenBank:WP_224052672.1;Name=WP_224052672.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217864.1;locus_tag=LDO49_RS30645;product=ABC transporter permease;protein_id=WP_224052672.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 78619 80040 . + . ID=gene-LDO49_RS30650;Name=LDO49_RS30650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30650;old_locus_tag=BCEP4_630075 NZ_CAJZAV010000272.1 Protein Homology CDS 78619 80040 . + 0 ID=cds-WP_081058910.1;Parent=gene-LDO49_RS30650;Dbxref=GenBank:WP_081058910.1;Name=WP_081058910.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487759.1;locus_tag=LDO49_RS30650;product=MFS transporter;protein_id=WP_081058910.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 80105 81838 . - . ID=gene-LDO49_RS30655;Name=LDO49_RS30655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30655;old_locus_tag=BCEP4_630076 NZ_CAJZAV010000272.1 Protein Homology CDS 80105 81838 . - 0 ID=cds-WP_060071430.1;Parent=gene-LDO49_RS30655;Dbxref=GenBank:WP_060071430.1;Name=WP_060071430.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399530.1;locus_tag=LDO49_RS30655;product=S53 family peptidase;protein_id=WP_060071430.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 82486 82809 . + . ID=gene-LDO49_RS30660;Name=LDO49_RS30660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30660;old_locus_tag=BCEP4_630079 NZ_CAJZAV010000272.1 Protein Homology CDS 82486 82809 . + 0 ID=cds-WP_042974255.1;Parent=gene-LDO49_RS30660;Dbxref=GenBank:WP_042974255.1;Name=WP_042974255.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899976.1;locus_tag=LDO49_RS30660;product=ArsR/SmtB family transcription factor;protein_id=WP_042974255.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 82809 83240 . + . ID=gene-LDO49_RS30665;Name=LDO49_RS30665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30665;old_locus_tag=BCEP4_630078 NZ_CAJZAV010000272.1 Protein Homology CDS 82809 83240 . + 0 ID=cds-WP_021158696.1;Parent=gene-LDO49_RS30665;Dbxref=GenBank:WP_021158696.1;Name=WP_021158696.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479364.1;locus_tag=LDO49_RS30665;product=SRPBCC family protein;protein_id=WP_021158696.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 83237 83668 . + . ID=gene-LDO49_RS30670;Name=LDO49_RS30670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30670;old_locus_tag=BCEP4_630080 NZ_CAJZAV010000272.1 Protein Homology CDS 83237 83668 . + 0 ID=cds-WP_060071433.1;Parent=gene-LDO49_RS30670;Dbxref=GenBank:WP_060071433.1;Name=WP_060071433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487774.1;locus_tag=LDO49_RS30670;product=DUF1801 domain-containing protein;protein_id=WP_060071433.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 83793 86510 . - . ID=gene-LDO49_RS30675;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=LDO49_RS30675;old_locus_tag=BCEP4_630081 NZ_CAJZAV010000272.1 Protein Homology CDS 83793 86510 . - 0 ID=cds-WP_059621906.1;Parent=gene-LDO49_RS30675;Dbxref=GenBank:WP_059621906.1;Name=WP_059621906.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012428654.1;locus_tag=LDO49_RS30675;product=aconitate hydratase AcnA;protein_id=WP_059621906.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 86563 88014 . - . ID=gene-LDO49_RS30680;Name=LDO49_RS30680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30680;old_locus_tag=BCEP4_630082 NZ_CAJZAV010000272.1 Protein Homology CDS 86563 88014 . - 0 ID=cds-WP_059493498.1;Parent=gene-LDO49_RS30680;Dbxref=GenBank:WP_059493498.1;Name=WP_059493498.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487726.1;locus_tag=LDO49_RS30680;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_059493498.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 88037 88552 . - . ID=gene-LDO49_RS30685;Name=LDO49_RS30685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30685;old_locus_tag=BCEP4_630083 NZ_CAJZAV010000272.1 Protein Homology CDS 88037 88552 . - 0 ID=cds-WP_021158700.1;Parent=gene-LDO49_RS30685;Dbxref=GenBank:WP_021158700.1;Name=WP_021158700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724726.1;locus_tag=LDO49_RS30685;product=hypothetical protein;protein_id=WP_021158700.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 88782 89789 . - . ID=gene-LDO49_RS30690;Name=LDO49_RS30690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30690;old_locus_tag=BCEP4_630084 NZ_CAJZAV010000272.1 Protein Homology CDS 88782 89789 . - 0 ID=cds-WP_124588397.1;Parent=gene-LDO49_RS30690;Dbxref=GenBank:WP_124588397.1;Name=WP_124588397.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495965.1;locus_tag=LDO49_RS30690;product=HpcH/HpaI aldolase/citrate lyase family protein;protein_id=WP_124588397.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 89977 90963 . - . ID=gene-LDO49_RS30695;Name=LDO49_RS30695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30695;old_locus_tag=BCEP4_630085 NZ_CAJZAV010000272.1 Protein Homology CDS 89977 90963 . - 0 ID=cds-WP_027791119.1;Parent=gene-LDO49_RS30695;Dbxref=GenBank:WP_027791119.1;Name=WP_027791119.1;Ontology_term=GO:0006108,GO:0016615;gbkey=CDS;go_function=malate dehydrogenase activity|0016615||IEA;go_process=malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754984.1;locus_tag=LDO49_RS30695;product=malate dehydrogenase;protein_id=WP_027791119.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 91252 92076 . + . ID=gene-LDO49_RS30700;Name=LDO49_RS30700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30700;old_locus_tag=BCEP4_630087 NZ_CAJZAV010000272.1 Protein Homology CDS 91252 92076 . + 0 ID=cds-WP_034196031.1;Parent=gene-LDO49_RS30700;Dbxref=GenBank:WP_034196031.1;Name=WP_034196031.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196014.1;locus_tag=LDO49_RS30700;product=GntR family transcriptional regulator;protein_id=WP_034196031.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 92248 92664 . + . ID=gene-LDO49_RS30705;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=LDO49_RS30705;old_locus_tag=BCEP4_630088 NZ_CAJZAV010000272.1 Protein Homology CDS 92248 92664 . + 0 ID=cds-WP_021158703.1;Parent=gene-LDO49_RS30705;Dbxref=GenBank:WP_021158703.1;Name=WP_021158703.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0045273;gbkey=CDS;gene=sdhC;go_component=respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009895818.1;locus_tag=LDO49_RS30705;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=WP_021158703.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 92669 93037 . + . ID=gene-LDO49_RS30710;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=LDO49_RS30710;old_locus_tag=BCEP4_630089 NZ_CAJZAV010000272.1 Protein Homology CDS 92669 93037 . + 0 ID=cds-WP_011355745.1;Parent=gene-LDO49_RS30710;Dbxref=GenBank:WP_011355745.1;Name=WP_011355745.1;Ontology_term=GO:0006099,GO:0000104,GO:0020037,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhD;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,heme binding|0020037||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018439830.1;locus_tag=LDO49_RS30710;product=succinate dehydrogenase%2C hydrophobic membrane anchor protein;protein_id=WP_011355745.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 93041 94816 . + . ID=gene-LDO49_RS30715;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=LDO49_RS30715;old_locus_tag=BCEP4_630090 NZ_CAJZAV010000272.1 Protein Homology CDS 93041 94816 . + 0 ID=cds-WP_021158704.1;Parent=gene-LDO49_RS30715;Dbxref=GenBank:WP_021158704.1;Name=WP_021158704.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014193768.1;locus_tag=LDO49_RS30715;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_021158704.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 94838 95539 . + . ID=gene-LDO49_RS30720;Name=LDO49_RS30720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30720;old_locus_tag=BCEP4_630091 NZ_CAJZAV010000272.1 Protein Homology CDS 94838 95539 . + 0 ID=cds-WP_006479352.1;Parent=gene-LDO49_RS30720;Dbxref=GenBank:WP_006479352.1;Name=WP_006479352.1;Ontology_term=GO:0008177,GO:0046872;gbkey=CDS;go_function=succinate dehydrogenase (quinone) activity|0008177||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733632.1;locus_tag=LDO49_RS30720;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_006479352.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 95552 95824 . + . ID=gene-LDO49_RS30725;Name=LDO49_RS30725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30725;old_locus_tag=BCEP4_630092 NZ_CAJZAV010000272.1 Protein Homology CDS 95552 95824 . + 0 ID=cds-WP_011548107.1;Parent=gene-LDO49_RS30725;Dbxref=GenBank:WP_011548107.1;Name=WP_011548107.1;Ontology_term=GO:0006099,GO:0006105,GO:0022900,GO:0034552;gbkey=CDS;go_process=tricarboxylic acid cycle|0006099||IEA,succinate metabolic process|0006105||IEA,electron transport chain|0022900||IEA,respiratory chain complex II assembly|0034552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028609.1;locus_tag=LDO49_RS30725;product=FAD assembly factor SdhE;protein_id=WP_011548107.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 95891 97192 . + . ID=gene-LDO49_RS30730;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=LDO49_RS30730;old_locus_tag=BCEP4_630093 NZ_CAJZAV010000272.1 Protein Homology CDS 95891 97192 . + 0 ID=cds-WP_011355741.1;Parent=gene-LDO49_RS30730;Dbxref=GenBank:WP_011355741.1;Name=WP_011355741.1;Ontology_term=GO:0006099,GO:0036440,GO:0005737;gbkey=CDS;gene=gltA;go_component=cytoplasm|0005737||IEA;go_function=citrate synthase activity|0036440||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188362.1;locus_tag=LDO49_RS30730;product=citrate synthase;protein_id=WP_011355741.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 97283 98248 . - . ID=gene-LDO49_RS30735;Name=LDO49_RS30735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30735;old_locus_tag=BCEP4_630095 NZ_CAJZAV010000272.1 Protein Homology CDS 97283 98248 . - 0 ID=cds-WP_060071441.1;Parent=gene-LDO49_RS30735;Dbxref=GenBank:WP_060071441.1;Name=WP_060071441.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217313.1;locus_tag=LDO49_RS30735;product=helix-turn-helix domain-containing protein;protein_id=WP_060071441.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 98321 98710 . + . ID=gene-LDO49_RS30740;Name=LDO49_RS30740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30740;old_locus_tag=BCEP4_630094 NZ_CAJZAV010000272.1 Protein Homology CDS 98321 98710 . + 0 ID=cds-WP_021158706.1;Parent=gene-LDO49_RS30740;Dbxref=GenBank:WP_021158706.1;Name=WP_021158706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355739.1;locus_tag=LDO49_RS30740;product=VOC family protein;protein_id=WP_021158706.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 98821 100071 . + . ID=gene-LDO49_RS30745;Name=LDO49_RS30745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30745;old_locus_tag=BCEP4_630096 NZ_CAJZAV010000272.1 Protein Homology CDS 98821 100071 . + 0 ID=cds-WP_060071444.1;Parent=gene-LDO49_RS30745;Dbxref=GenBank:WP_060071444.1;Name=WP_060071444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217311.1;locus_tag=LDO49_RS30745;product=DUF1479 domain-containing protein;protein_id=WP_060071444.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 100300 101058 . + . ID=gene-LDO49_RS30750;Name=LDO49_RS30750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30750;old_locus_tag=BCEP4_630097 NZ_CAJZAV010000272.1 Protein Homology CDS 100300 101058 . + 0 ID=cds-WP_060071446.1;Parent=gene-LDO49_RS30750;Dbxref=GenBank:WP_060071446.1;Name=WP_060071446.1;Ontology_term=GO:0016403,GO:0046872;gbkey=CDS;go_function=dimethylargininase activity|0016403||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399555.1;locus_tag=LDO49_RS30750;product=dimethylarginine dimethylaminohydrolase family protein;protein_id=WP_060071446.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 101157 101621 . + . ID=gene-LDO49_RS30755;Name=LDO49_RS30755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30755;old_locus_tag=BCEP4_630098 NZ_CAJZAV010000272.1 Protein Homology CDS 101157 101621 . + 0 ID=cds-WP_021158710.1;Parent=gene-LDO49_RS30755;Dbxref=GenBank:WP_021158710.1;Name=WP_021158710.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355736.1;locus_tag=LDO49_RS30755;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_021158710.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 101724 103256 . + . ID=gene-LDO49_RS30760;Name=LDO49_RS30760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30760;old_locus_tag=BCEP4_630099 NZ_CAJZAV010000272.1 Protein Homology CDS 101724 103256 . + 0 ID=cds-WP_059591772.1;Parent=gene-LDO49_RS30760;Dbxref=GenBank:WP_059591772.1;Name=WP_059591772.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899961.1;locus_tag=LDO49_RS30760;product=amino acid permease;protein_id=WP_059591772.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 103366 104280 . - . ID=gene-LDO49_RS30765;Name=LDO49_RS30765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30765;old_locus_tag=BCEP4_630100 NZ_CAJZAV010000272.1 Protein Homology CDS 103366 104280 . - 0 ID=cds-WP_059621916.1;Parent=gene-LDO49_RS30765;Dbxref=GenBank:WP_059621916.1;Name=WP_059621916.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010096036.1;locus_tag=LDO49_RS30765;product=LysR family transcriptional regulator;protein_id=WP_059621916.1;transl_table=11 NZ_CAJZAV010000272.1 RefSeq gene 104481 105043 . + . ID=gene-LDO49_RS30770;Name=LDO49_RS30770;end_range=105043,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30770;partial=true NZ_CAJZAV010000272.1 Protein Homology CDS 104481 105043 . + 0 ID=cds-WP_224052673.1;Parent=gene-LDO49_RS30770;Dbxref=GenBank:WP_224052673.1;Name=WP_224052673.1;Ontology_term=GO:0055085,GO:0022857;end_range=105043,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009972176.1;locus_tag=LDO49_RS30770;partial=true;product=MFS transporter;protein_id=WP_224052673.1;transl_table=11 ##sequence-region NZ_CAJZAV010000273.1 1 70231 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000273.1 RefSeq region 1 70231 . + . ID=NZ_CAJZAV010000273.1:1..70231;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_64 NZ_CAJZAV010000273.1 RefSeq gene 1 830 . - . ID=gene-LDO49_RS30775;Name=LDO49_RS30775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30775;partial=true;start_range=.,1 NZ_CAJZAV010000273.1 Protein Homology CDS 1 830 . - 0 ID=cds-WP_224052676.1;Parent=gene-LDO49_RS30775;Dbxref=GenBank:WP_224052676.1;Name=WP_224052676.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328570.1;locus_tag=LDO49_RS30775;partial=true;product=TolC family protein;protein_id=WP_224052676.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 833 3997 . - . ID=gene-LDO49_RS30780;Name=LDO49_RS30780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30780;old_locus_tag=BCEP4_640002 NZ_CAJZAV010000273.1 Protein Homology CDS 833 3997 . - 0 ID=cds-WP_060074656.1;Parent=gene-LDO49_RS30780;Dbxref=GenBank:WP_060074656.1;Name=WP_060074656.1;Ontology_term=GO:0042908,GO:0015562,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA,transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352187.1;locus_tag=LDO49_RS30780;product=efflux RND transporter permease subunit;protein_id=WP_060074656.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 3994 5103 . - . ID=gene-LDO49_RS30785;Name=LDO49_RS30785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30785;old_locus_tag=BCEP4_640003 NZ_CAJZAV010000273.1 Protein Homology CDS 3994 5103 . - 0 ID=cds-WP_059710276.1;Parent=gene-LDO49_RS30785;Dbxref=GenBank:WP_059710276.1;Name=WP_059710276.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538244.1;locus_tag=LDO49_RS30785;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_059710276.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 5289 5909 . + . ID=gene-LDO49_RS30790;Name=LDO49_RS30790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30790;old_locus_tag=BCEP4_640004 NZ_CAJZAV010000273.1 Protein Homology CDS 5289 5909 . + 0 ID=cds-WP_021160908.1;Parent=gene-LDO49_RS30790;Dbxref=GenBank:WP_021160908.1;Name=WP_021160908.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491184.1;locus_tag=LDO49_RS30790;product=TetR/AcrR family transcriptional regulator;protein_id=WP_021160908.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 6006 7739 . - . ID=gene-LDO49_RS30795;Name=LDO49_RS30795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30795;old_locus_tag=BCEP4_640005 NZ_CAJZAV010000273.1 Protein Homology CDS 6006 7739 . - 0 ID=cds-WP_196482955.1;Parent=gene-LDO49_RS30795;Dbxref=GenBank:WP_196482955.1;Name=WP_196482955.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467624.1;locus_tag=LDO49_RS30795;product=ClcB-like voltage-gated chloride channel protein;protein_id=WP_196482955.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 7843 8910 . - . ID=gene-LDO49_RS30800;Name=LDO49_RS30800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30800;old_locus_tag=BCEP4_640006 NZ_CAJZAV010000273.1 Protein Homology CDS 7843 8910 . - 0 ID=cds-WP_048022797.1;Parent=gene-LDO49_RS30800;Dbxref=GenBank:WP_048022797.1;Name=WP_048022797.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213301.1;locus_tag=LDO49_RS30800;product=YeiH family protein;protein_id=WP_048022797.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 9023 9916 . + . ID=gene-LDO49_RS30805;Name=LDO49_RS30805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30805;old_locus_tag=BCEP4_640007 NZ_CAJZAV010000273.1 Protein Homology CDS 9023 9916 . + 0 ID=cds-WP_060074657.1;Parent=gene-LDO49_RS30805;Dbxref=GenBank:WP_060074657.1;Name=WP_060074657.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328565.1;locus_tag=LDO49_RS30805;product=LysR family transcriptional regulator;protein_id=WP_060074657.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 10090 10854 . + . ID=gene-LDO49_RS30810;Name=LDO49_RS30810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30810;old_locus_tag=BCEP4_640009 NZ_CAJZAV010000273.1 Protein Homology CDS 10090 10854 . + 0 ID=cds-WP_059675887.1;Parent=gene-LDO49_RS30810;Dbxref=GenBank:WP_059675887.1;Name=WP_059675887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754793.1;locus_tag=LDO49_RS30810;product=xylose isomerase;protein_id=WP_059675887.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 10883 11875 . + . ID=gene-LDO49_RS30815;Name=LDO49_RS30815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30815;old_locus_tag=BCEP4_640010 NZ_CAJZAV010000273.1 Protein Homology CDS 10883 11875 . + 0 ID=cds-WP_060074658.1;Parent=gene-LDO49_RS30815;Dbxref=GenBank:WP_060074658.1;Name=WP_060074658.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764274.1;locus_tag=LDO49_RS30815;product=sugar kinase;protein_id=WP_060074658.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 12076 13356 . + . ID=gene-LDO49_RS30820;Name=LDO49_RS30820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30820;old_locus_tag=BCEP4_640011 NZ_CAJZAV010000273.1 Protein Homology CDS 12076 13356 . + 0 ID=cds-WP_021160915.1;Parent=gene-LDO49_RS30820;Dbxref=GenBank:WP_021160915.1;Name=WP_021160915.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890952.1;locus_tag=LDO49_RS30820;product=MFS transporter;protein_id=WP_021160915.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 13362 14327 . + . ID=gene-LDO49_RS30825;Name=LDO49_RS30825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30825;old_locus_tag=BCEP4_640012 NZ_CAJZAV010000273.1 Protein Homology CDS 13362 14327 . + 0 ID=cds-WP_060074683.1;Parent=gene-LDO49_RS30825;Dbxref=GenBank:WP_060074683.1;Name=WP_060074683.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006475965.1;locus_tag=LDO49_RS30825;product=NAD(P)-dependent oxidoreductase;protein_id=WP_060074683.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 14753 15796 . + . ID=gene-LDO49_RS30830;Name=LDO49_RS30830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30830;old_locus_tag=BCEP4_640014 NZ_CAJZAV010000273.1 Protein Homology CDS 14753 15796 . + 0 ID=cds-WP_059488421.1;Parent=gene-LDO49_RS30830;Dbxref=GenBank:WP_059488421.1;Name=WP_059488421.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332130.1;locus_tag=LDO49_RS30830;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_059488421.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 15851 16639 . + . ID=gene-LDO49_RS30835;Name=LDO49_RS30835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30835;old_locus_tag=BCEP4_640015 NZ_CAJZAV010000273.1 Protein Homology CDS 15851 16639 . + 0 ID=cds-WP_021160919.1;Parent=gene-LDO49_RS30835;Dbxref=GenBank:WP_021160919.1;Name=WP_021160919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491183.1;locus_tag=LDO49_RS30835;product=YhfC family intramembrane metalloprotease;protein_id=WP_021160919.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 16653 17015 . + . ID=gene-LDO49_RS30840;Name=LDO49_RS30840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30840;old_locus_tag=BCEP4_640016 NZ_CAJZAV010000273.1 Protein Homology CDS 16653 17015 . + 0 ID=cds-WP_048022794.1;Parent=gene-LDO49_RS30840;Dbxref=GenBank:WP_048022794.1;Name=WP_048022794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884902.1;locus_tag=LDO49_RS30840;product=DUF3022 domain-containing protein;protein_id=WP_048022794.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 17049 17480 . - . ID=gene-LDO49_RS30845;Name=LDO49_RS30845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30845;old_locus_tag=BCEP4_640017 NZ_CAJZAV010000273.1 Protein Homology CDS 17049 17480 . - 0 ID=cds-WP_060074659.1;Parent=gene-LDO49_RS30845;Dbxref=GenBank:WP_060074659.1;Name=WP_060074659.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896979.1;locus_tag=LDO49_RS30845;product=PGDYG domain-containing protein;protein_id=WP_060074659.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 17623 18168 . - . ID=gene-LDO49_RS30850;Name=LDO49_RS30850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30850;old_locus_tag=BCEP4_640019 NZ_CAJZAV010000273.1 Protein Homology CDS 17623 18168 . - 0 ID=cds-WP_059588435.1;Parent=gene-LDO49_RS30850;Dbxref=GenBank:WP_059588435.1;Name=WP_059588435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400019.1;locus_tag=LDO49_RS30850;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_059588435.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 18424 18888 . + . ID=gene-LDO49_RS30855;Name=LDO49_RS30855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30855;old_locus_tag=BCEP4_640018 NZ_CAJZAV010000273.1 Protein Homology CDS 18424 18888 . + 0 ID=cds-WP_006481526.1;Parent=gene-LDO49_RS30855;Dbxref=GenBank:WP_006481526.1;Name=WP_006481526.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656928.1;locus_tag=LDO49_RS30855;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_006481526.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 18892 19176 . - . ID=gene-LDO49_RS30860;Name=LDO49_RS30860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30860 NZ_CAJZAV010000273.1 GeneMarkS-2+ CDS 18892 19176 . - 0 ID=cds-WP_060074660.1;Parent=gene-LDO49_RS30860;Dbxref=GenBank:WP_060074660.1;Name=WP_060074660.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS30860;product=hypothetical protein;protein_id=WP_060074660.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq pseudogene 19356 19631 . - . ID=gene-LDO49_RS37645;Name=LDO49_RS37645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37645;partial=true;pseudo=true;start_range=.,19356 NZ_CAJZAV010000273.1 Protein Homology CDS 19356 19631 . - 0 ID=cds-LDO49_RS37645;Parent=gene-LDO49_RS37645;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015921.6;locus_tag=LDO49_RS37645;partial=true;product=hypothetical protein;pseudo=true;start_range=.,19356;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 19759 20859 . + . ID=gene-LDO49_RS30870;Name=LDO49_RS30870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30870;old_locus_tag=BCEP4_640022 NZ_CAJZAV010000273.1 Protein Homology CDS 19759 20859 . + 0 ID=cds-WP_021160924.1;Parent=gene-LDO49_RS30870;Dbxref=GenBank:WP_021160924.1;Name=WP_021160924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192972.1;locus_tag=LDO49_RS30870;product=saccharopine dehydrogenase family protein;protein_id=WP_021160924.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 20954 21571 . - . ID=gene-LDO49_RS30875;Name=LDO49_RS30875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30875;old_locus_tag=BCEP4_640023 NZ_CAJZAV010000273.1 Protein Homology CDS 20954 21571 . - 0 ID=cds-WP_021160925.1;Parent=gene-LDO49_RS30875;Dbxref=GenBank:WP_021160925.1;Name=WP_021160925.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004266847.1;locus_tag=LDO49_RS30875;product=AAA family ATPase;protein_id=WP_021160925.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 21568 21714 . - . ID=gene-LDO49_RS30880;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;gene_synonym=ybgT;locus_tag=LDO49_RS30880;old_locus_tag=BCEP4_640024 NZ_CAJZAV010000273.1 Protein Homology CDS 21568 21714 . - 0 ID=cds-WP_048022786.1;Parent=gene-LDO49_RS30880;Dbxref=GenBank:WP_048022786.1;Name=WP_048022786.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755040.1;locus_tag=LDO49_RS30880;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_048022786.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 21870 22847 . + . ID=gene-LDO49_RS30885;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=LDO49_RS30885;old_locus_tag=BCEP4_640025 NZ_CAJZAV010000273.1 Protein Homology CDS 21870 22847 . + 0 ID=cds-WP_021160927.1;Parent=gene-LDO49_RS30885;Dbxref=GenBank:WP_021160927.1;Name=WP_021160927.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909327.1;locus_tag=LDO49_RS30885;product=magnesium/cobalt transporter CorA;protein_id=WP_021160927.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 22861 23148 . - . ID=gene-LDO49_RS30890;Name=LDO49_RS30890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30890;old_locus_tag=BCEP4_640026 NZ_CAJZAV010000273.1 Protein Homology CDS 22861 23148 . - 0 ID=cds-WP_021160928.1;Parent=gene-LDO49_RS30890;Dbxref=GenBank:WP_021160928.1;Name=WP_021160928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764286.1;locus_tag=LDO49_RS30890;product=YciI-like protein;protein_id=WP_021160928.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 23469 23957 . - . ID=gene-LDO49_RS30895;Name=LDO49_RS30895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30895;old_locus_tag=BCEP4_640028 NZ_CAJZAV010000273.1 Protein Homology CDS 23469 23957 . - 0 ID=cds-WP_124475735.1;Parent=gene-LDO49_RS30895;Dbxref=GenBank:WP_124475735.1;Name=WP_124475735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197879.1;locus_tag=LDO49_RS30895;product=adenosine-specific kinase;protein_id=WP_124475735.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 24096 25094 . + . ID=gene-LDO49_RS30900;Name=LDO49_RS30900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30900;old_locus_tag=BCEP4_640027 NZ_CAJZAV010000273.1 Protein Homology CDS 24096 25094 . + 0 ID=cds-WP_048022783.1;Parent=gene-LDO49_RS30900;Dbxref=GenBank:WP_048022783.1;Name=WP_048022783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896987.1;locus_tag=LDO49_RS30900;product=cysteine synthase A;protein_id=WP_048022783.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 25195 25680 . + . ID=gene-LDO49_RS30905;Name=LDO49_RS30905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30905;old_locus_tag=BCEP4_640029 NZ_CAJZAV010000273.1 Protein Homology CDS 25195 25680 . + 0 ID=cds-WP_027787328.1;Parent=gene-LDO49_RS30905;Dbxref=GenBank:WP_027787328.1;Name=WP_027787328.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009914978.1;locus_tag=LDO49_RS30905;product=aminoacyl-tRNA deacylase;protein_id=WP_027787328.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 26276 26518 . - . ID=gene-LDO49_RS30910;Name=LDO49_RS30910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30910 NZ_CAJZAV010000273.1 GeneMarkS-2+ CDS 26276 26518 . - 0 ID=cds-WP_124475736.1;Parent=gene-LDO49_RS30910;Dbxref=GenBank:WP_124475736.1;Name=WP_124475736.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS30910;product=hypothetical protein;protein_id=WP_124475736.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 26517 27215 . + . ID=gene-LDO49_RS30915;Name=LDO49_RS30915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30915;old_locus_tag=BCEP4_640031 NZ_CAJZAV010000273.1 Protein Homology CDS 26517 27215 . + 0 ID=cds-WP_048022908.1;Parent=gene-LDO49_RS30915;Dbxref=GenBank:WP_048022908.1;Name=WP_048022908.1;Ontology_term=GO:0015031,GO:0015891,GO:0055085,GO:0031992,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=energy transducer activity|0031992||IEA;go_process=protein transport|0015031||IEA,siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481523.1;locus_tag=LDO49_RS30915;product=energy transducer TonB;protein_id=WP_048022908.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 27302 28216 . + . ID=gene-LDO49_RS30920;Name=LDO49_RS30920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30920;old_locus_tag=BCEP4_640032 NZ_CAJZAV010000273.1 Protein Homology CDS 27302 28216 . + 0 ID=cds-WP_059488432.1;Parent=gene-LDO49_RS30920;Dbxref=GenBank:WP_059488432.1;Name=WP_059488432.1;Ontology_term=GO:0015031,GO:0015252,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=proton channel activity|0015252||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328557.1;locus_tag=LDO49_RS30920;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_059488432.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 28237 28659 . + . ID=gene-LDO49_RS30925;Name=LDO49_RS30925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30925;old_locus_tag=BCEP4_640033 NZ_CAJZAV010000273.1 Protein Homology CDS 28237 28659 . + 0 ID=cds-WP_021160935.1;Parent=gene-LDO49_RS30925;Dbxref=GenBank:WP_021160935.1;Name=WP_021160935.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777874.1;locus_tag=LDO49_RS30925;product=ExbD/TolR family protein;protein_id=WP_021160935.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 28934 29365 . + . ID=gene-LDO49_RS30930;Name=LDO49_RS30930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30930;old_locus_tag=BCEP4_640034 NZ_CAJZAV010000273.1 Protein Homology CDS 28934 29365 . + 0 ID=cds-WP_048022780.1;Parent=gene-LDO49_RS30930;Dbxref=GenBank:WP_048022780.1;Name=WP_048022780.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328556.1;locus_tag=LDO49_RS30930;product=ExbD/TolR family protein;protein_id=WP_048022780.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 29382 30572 . + . ID=gene-LDO49_RS30935;Name=LDO49_RS30935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30935;old_locus_tag=BCEP4_640035 NZ_CAJZAV010000273.1 Protein Homology CDS 29382 30572 . + 0 ID=cds-WP_059488434.1;Parent=gene-LDO49_RS30935;Dbxref=GenBank:WP_059488434.1;Name=WP_059488434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492636.1;locus_tag=LDO49_RS30935;product=tetratricopeptide repeat protein;protein_id=WP_059488434.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 30889 31464 . + . ID=gene-LDO49_RS30940;Name=LDO49_RS30940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30940;old_locus_tag=BCEP4_640036 NZ_CAJZAV010000273.1 Protein Homology CDS 30889 31464 . + 0 ID=cds-WP_042975880.1;Parent=gene-LDO49_RS30940;Dbxref=GenBank:WP_042975880.1;Name=WP_042975880.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882235.1;locus_tag=LDO49_RS30940;product=helix-turn-helix domain-containing protein;protein_id=WP_042975880.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 31781 34579 . + . ID=gene-LDO49_RS30945;Name=LDO49_RS30945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30945;old_locus_tag=BCEP4_640037 NZ_CAJZAV010000273.1 Protein Homology CDS 31781 34579 . + 0 ID=cds-WP_059675892.1;Parent=gene-LDO49_RS30945;Dbxref=GenBank:WP_059675892.1;Name=WP_059675892.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882236.1;locus_tag=LDO49_RS30945;product=TonB-dependent receptor;protein_id=WP_059675892.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 34819 36741 . + . ID=gene-LDO49_RS30950;Name=LDO49_RS30950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30950;old_locus_tag=BCEP4_640038 NZ_CAJZAV010000273.1 Protein Homology CDS 34819 36741 . + 0 ID=cds-WP_224052677.1;Parent=gene-LDO49_RS30950;Dbxref=GenBank:WP_224052677.1;Name=WP_224052677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352153.1;locus_tag=LDO49_RS30950;product=extracellular solute-binding protein;protein_id=WP_224052677.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 36754 37806 . + . ID=gene-LDO49_RS30955;Name=LDO49_RS30955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30955;old_locus_tag=BCEP4_640039 NZ_CAJZAV010000273.1 Protein Homology CDS 36754 37806 . + 0 ID=cds-WP_059495886.1;Parent=gene-LDO49_RS30955;Dbxref=GenBank:WP_059495886.1;Name=WP_059495886.1;Ontology_term=GO:0042884,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=microcin transport|0042884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006475984.1;locus_tag=LDO49_RS30955;product=microcin C ABC transporter permease YejB;protein_id=WP_059495886.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 37760 38872 . + . ID=gene-LDO49_RS30960;Name=LDO49_RS30960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30960;old_locus_tag=BCEP4_640040 NZ_CAJZAV010000273.1 Protein Homology CDS 37760 38872 . + 0 ID=cds-WP_060279831.1;Parent=gene-LDO49_RS30960;Dbxref=GenBank:WP_060279831.1;Name=WP_060279831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006475985.1;locus_tag=LDO49_RS30960;product=ABC transporter permease;protein_id=WP_060279831.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 38872 40521 . + . ID=gene-LDO49_RS30965;Name=LDO49_RS30965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30965;old_locus_tag=BCEP4_640041 NZ_CAJZAV010000273.1 Protein Homology CDS 38872 40521 . + 0 ID=cds-WP_224052678.1;Parent=gene-LDO49_RS30965;Dbxref=GenBank:WP_224052678.1;Name=WP_224052678.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497230.1;locus_tag=LDO49_RS30965;product=ABC transporter ATP-binding protein;protein_id=WP_224052678.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 40514 41965 . + . ID=gene-LDO49_RS30970;Name=LDO49_RS30970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30970;old_locus_tag=BCEP4_640042 NZ_CAJZAV010000273.1 Protein Homology CDS 40514 41965 . + 0 ID=cds-WP_059488445.1;Parent=gene-LDO49_RS30970;Dbxref=GenBank:WP_059488445.1;Name=WP_059488445.1;Ontology_term=GO:0006508,GO:0008237,GO:0008270;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532569.1;locus_tag=LDO49_RS30970;product=TldD/PmbA family protein;protein_id=WP_059488445.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 41965 43326 . + . ID=gene-LDO49_RS30975;Name=LDO49_RS30975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30975;old_locus_tag=BCEP4_640043 NZ_CAJZAV010000273.1 Protein Homology CDS 41965 43326 . + 0 ID=cds-WP_224052679.1;Parent=gene-LDO49_RS30975;Dbxref=GenBank:WP_224052679.1;Name=WP_224052679.1;Ontology_term=GO:0006508,GO:0008237,GO:0008270;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691695.1;locus_tag=LDO49_RS30975;product=TldD/PmbA family protein;protein_id=WP_224052679.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 43348 46509 . + . ID=gene-LDO49_RS30980;Name=LDO49_RS30980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30980;old_locus_tag=BCEP4_640044 NZ_CAJZAV010000273.1 Protein Homology CDS 43348 46509 . + 0 ID=cds-WP_224052680.1;Parent=gene-LDO49_RS30980;Dbxref=GenBank:WP_224052680.1;Name=WP_224052680.1;Ontology_term=GO:0042908,GO:0055085,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882241.1;locus_tag=LDO49_RS30980;product=multidrug efflux RND transporter permease subunit;protein_id=WP_224052680.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 46638 47285 . + . ID=gene-LDO49_RS30985;Name=LDO49_RS30985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30985;old_locus_tag=BCEP4_640045 NZ_CAJZAV010000273.1 Protein Homology CDS 46638 47285 . + 0 ID=cds-WP_059488452.1;Parent=gene-LDO49_RS30985;Dbxref=GenBank:WP_059488452.1;Name=WP_059488452.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352140.1;locus_tag=LDO49_RS30985;product=glutathione S-transferase family protein;protein_id=WP_059488452.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 47394 48302 . - . ID=gene-LDO49_RS30990;Name=LDO49_RS30990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30990;old_locus_tag=BCEP4_640046 NZ_CAJZAV010000273.1 Protein Homology CDS 47394 48302 . - 0 ID=cds-WP_224052681.1;Parent=gene-LDO49_RS30990;Dbxref=GenBank:WP_224052681.1;Name=WP_224052681.1;Ontology_term=GO:0050526;gbkey=CDS;go_function=poly(3-hydroxybutyrate) depolymerase activity|0050526||IEA;inference=COORDINATES: protein motif:HMM:NF050058.1;locus_tag=LDO49_RS30990;product=extracellular catalytic domain type 1 short-chain-length polyhydroxyalkanoate depolymerase;protein_id=WP_224052681.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 48250 48417 . + . ID=gene-LDO49_RS30995;Name=LDO49_RS30995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS30995 NZ_CAJZAV010000273.1 GeneMarkS-2+ CDS 48250 48417 . + 0 ID=cds-WP_224052692.1;Parent=gene-LDO49_RS30995;Dbxref=GenBank:WP_224052692.1;Name=WP_224052692.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS30995;product=hypothetical protein;protein_id=WP_224052692.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 48509 48763 . - . ID=gene-LDO49_RS31000;Name=LDO49_RS31000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31000;old_locus_tag=BCEP4_640047 NZ_CAJZAV010000273.1 Protein Homology CDS 48509 48763 . - 0 ID=cds-WP_224052682.1;Parent=gene-LDO49_RS31000;Dbxref=GenBank:WP_224052682.1;Name=WP_224052682.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356276.1;locus_tag=LDO49_RS31000;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_224052682.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 48995 49306 . - . ID=gene-LDO49_RS31005;Name=LDO49_RS31005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31005;old_locus_tag=BCEP4_640048 NZ_CAJZAV010000273.1 Protein Homology CDS 48995 49306 . - 0 ID=cds-WP_224052683.1;Parent=gene-LDO49_RS31005;Dbxref=GenBank:WP_224052683.1;Name=WP_224052683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467560.1;locus_tag=LDO49_RS31005;product=hypothetical protein;protein_id=WP_224052683.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 49306 49677 . - . ID=gene-LDO49_RS31010;Name=LDO49_RS31010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31010;old_locus_tag=BCEP4_640049 NZ_CAJZAV010000273.1 Protein Homology CDS 49306 49677 . - 0 ID=cds-WP_224052684.1;Parent=gene-LDO49_RS31010;Dbxref=GenBank:WP_224052684.1;Name=WP_224052684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417378.1;locus_tag=LDO49_RS31010;product=hypothetical protein;protein_id=WP_224052684.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 49730 49978 . - . ID=gene-LDO49_RS31015;Name=LDO49_RS31015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31015;old_locus_tag=BCEP4_640050 NZ_CAJZAV010000273.1 Protein Homology CDS 49730 49978 . - 0 ID=cds-WP_021160952.1;Parent=gene-LDO49_RS31015;Dbxref=GenBank:WP_021160952.1;Name=WP_021160952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401010.1;locus_tag=LDO49_RS31015;product=CsbD family protein;protein_id=WP_021160952.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 50097 50249 . - . ID=gene-LDO49_RS31020;Name=LDO49_RS31020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31020;old_locus_tag=BCEP4_640051 NZ_CAJZAV010000273.1 GeneMarkS-2+ CDS 50097 50249 . - 0 ID=cds-WP_196489745.1;Parent=gene-LDO49_RS31020;Dbxref=GenBank:WP_196489745.1;Name=WP_196489745.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS31020;product=hypothetical protein;protein_id=WP_196489745.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 50339 50872 . - . ID=gene-LDO49_RS31025;Name=LDO49_RS31025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31025;old_locus_tag=BCEP4_640052 NZ_CAJZAV010000273.1 Protein Homology CDS 50339 50872 . - 0 ID=cds-WP_059710263.1;Parent=gene-LDO49_RS31025;Dbxref=GenBank:WP_059710263.1;Name=WP_059710263.1;Ontology_term=GO:0016872;gbkey=CDS;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349274.1;locus_tag=LDO49_RS31025;product=chalcone isomerase family protein;protein_id=WP_059710263.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 50874 52091 . - . ID=gene-LDO49_RS31030;Name=LDO49_RS31030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31030;old_locus_tag=BCEP4_640053 NZ_CAJZAV010000273.1 Protein Homology CDS 50874 52091 . - 0 ID=cds-WP_104767902.1;Parent=gene-LDO49_RS31030;Dbxref=GenBank:WP_104767902.1;Name=WP_104767902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725772.1;locus_tag=LDO49_RS31030;product=SAM-dependent methyltransferase;protein_id=WP_104767902.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 52088 52942 . - . ID=gene-LDO49_RS31035;Name=LDO49_RS31035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31035;old_locus_tag=BCEP4_640054 NZ_CAJZAV010000273.1 Protein Homology CDS 52088 52942 . - 0 ID=cds-WP_224052685.1;Parent=gene-LDO49_RS31035;Dbxref=GenBank:WP_224052685.1;Name=WP_224052685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725773.1;locus_tag=LDO49_RS31035;product=DUF1365 domain-containing protein;protein_id=WP_224052685.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 52939 54246 . - . ID=gene-LDO49_RS31040;Name=LDO49_RS31040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31040;old_locus_tag=BCEP4_640055 NZ_CAJZAV010000273.1 Protein Homology CDS 52939 54246 . - 0 ID=cds-WP_224052686.1;Parent=gene-LDO49_RS31040;Dbxref=GenBank:WP_224052686.1;Name=WP_224052686.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349277.1;locus_tag=LDO49_RS31040;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_224052686.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 54338 54949 . - . ID=gene-LDO49_RS31045;Name=LDO49_RS31045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31045;old_locus_tag=BCEP4_640056 NZ_CAJZAV010000273.1 Protein Homology CDS 54338 54949 . - 0 ID=cds-WP_224052687.1;Parent=gene-LDO49_RS31045;Dbxref=GenBank:WP_224052687.1;Name=WP_224052687.1;Ontology_term=GO:0006950,GO:0008289,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=lipid binding|0008289||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349278.1;locus_tag=LDO49_RS31045;product=lipocalin family protein;protein_id=WP_224052687.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 54958 56058 . - . ID=gene-LDO49_RS31050;Name=LDO49_RS31050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31050;old_locus_tag=BCEP4_640057 NZ_CAJZAV010000273.1 Protein Homology CDS 54958 56058 . - 0 ID=cds-WP_224052688.1;Parent=gene-LDO49_RS31050;Dbxref=GenBank:WP_224052688.1;Name=WP_224052688.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218186.1;locus_tag=LDO49_RS31050;product=SAM-dependent methyltransferase;protein_id=WP_224052688.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 56055 56888 . - . ID=gene-LDO49_RS31055;Name=LDO49_RS31055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31055;old_locus_tag=BCEP4_640058 NZ_CAJZAV010000273.1 Protein Homology CDS 56055 56888 . - 0 ID=cds-WP_059588413.1;Parent=gene-LDO49_RS31055;Dbxref=GenBank:WP_059588413.1;Name=WP_059588413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218185.1;locus_tag=LDO49_RS31055;product=DUF1295 domain-containing protein;protein_id=WP_059588413.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 57044 57778 . - . ID=gene-LDO49_RS31060;Name=LDO49_RS31060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31060;old_locus_tag=BCEP4_640059 NZ_CAJZAV010000273.1 Protein Homology CDS 57044 57778 . - 0 ID=cds-WP_059488470.1;Parent=gene-LDO49_RS31060;Dbxref=GenBank:WP_059488470.1;Name=WP_059488470.1;Ontology_term=GO:0006417,GO:0016989,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sigma factor antagonist activity|0016989||IEA;go_process=regulation of translation|0006417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880045.1;locus_tag=LDO49_RS31060;product=anti-sigma factor;protein_id=WP_059488470.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 57775 58371 . - . ID=gene-LDO49_RS31065;Name=LDO49_RS31065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31065;old_locus_tag=BCEP4_640060 NZ_CAJZAV010000273.1 Protein Homology CDS 57775 58371 . - 0 ID=cds-WP_060221799.1;Parent=gene-LDO49_RS31065;Dbxref=GenBank:WP_060221799.1;Name=WP_060221799.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725779.1;locus_tag=LDO49_RS31065;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_060221799.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 58610 59182 . + . ID=gene-LDO49_RS31070;Name=LDO49_RS31070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31070;old_locus_tag=BCEP4_640061 NZ_CAJZAV010000273.1 Protein Homology CDS 58610 59182 . + 0 ID=cds-WP_224052691.1;Parent=gene-LDO49_RS31070;Dbxref=GenBank:WP_224052691.1;Name=WP_224052691.1;Ontology_term=GO:0006950,GO:0008289,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=lipid binding|0008289||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875797.1;locus_tag=LDO49_RS31070;product=lipocalin family protein;protein_id=WP_224052691.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 59352 60011 . - . ID=gene-LDO49_RS31075;Name=LDO49_RS31075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31075;old_locus_tag=BCEP4_640062 NZ_CAJZAV010000273.1 Protein Homology CDS 59352 60011 . - 0 ID=cds-WP_021160963.1;Parent=gene-LDO49_RS31075;Dbxref=GenBank:WP_021160963.1;Name=WP_021160963.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349283.1;locus_tag=LDO49_RS31075;product=carbonic anhydrase;protein_id=WP_021160963.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq pseudogene 60232 60689 . - . ID=gene-LDO49_RS31080;Name=LDO49_RS31080;end_range=60689,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS31080;partial=true;pseudo=true NZ_CAJZAV010000273.1 Protein Homology CDS 60232 60689 . - 0 ID=cds-LDO49_RS31080;Parent=gene-LDO49_RS31080;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006310,GO:0015074,GO:0003677;end_range=60689,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694891.1;locus_tag=LDO49_RS31080;partial=true;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 60717 61094 . + . ID=gene-LDO49_RS31085;Name=LDO49_RS31085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31085;old_locus_tag=BCEP4_640065 NZ_CAJZAV010000273.1 Protein Homology CDS 60717 61094 . + 0 ID=cds-WP_372585881.1;Parent=gene-LDO49_RS31085;Dbxref=GenBank:WP_372585881.1;Name=WP_372585881.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF013540.6;locus_tag=LDO49_RS31085;product=helix-turn-helix domain-containing protein;protein_id=WP_372585881.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 61334 61642 . - . ID=gene-LDO49_RS31090;Name=LDO49_RS31090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31090 NZ_CAJZAV010000273.1 GeneMarkS-2+ CDS 61334 61642 . - 0 ID=cds-WP_124624471.1;Parent=gene-LDO49_RS31090;Dbxref=GenBank:WP_124624471.1;Name=WP_124624471.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS31090;product=hypothetical protein;protein_id=WP_124624471.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 62005 62667 . + . ID=gene-LDO49_RS31095;Name=LDO49_RS31095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31095;old_locus_tag=BCEP4_640067 NZ_CAJZAV010000273.1 GeneMarkS-2+ CDS 62005 62667 . + 0 ID=cds-WP_224052689.1;Parent=gene-LDO49_RS31095;Dbxref=GenBank:WP_224052689.1;Name=WP_224052689.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS31095;product=hypothetical protein;protein_id=WP_224052689.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 62690 65476 . + . ID=gene-LDO49_RS31100;Name=LDO49_RS31100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31100;old_locus_tag=BCEP4_640068 NZ_CAJZAV010000273.1 Protein Homology CDS 62690 65476 . + 0 ID=cds-WP_224052690.1;Parent=gene-LDO49_RS31100;Dbxref=GenBank:WP_224052690.1;Name=WP_224052690.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759982.1;locus_tag=LDO49_RS31100;product=type VI secretion system Vgr family protein;protein_id=WP_224052690.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 65498 67726 . + . ID=gene-LDO49_RS31105;Name=LDO49_RS31105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31105;old_locus_tag=BCEP4_640069 NZ_CAJZAV010000273.1 Protein Homology CDS 65498 67726 . + 0 ID=cds-WP_060155118.1;Parent=gene-LDO49_RS31105;Dbxref=GenBank:WP_060155118.1;Name=WP_060155118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482740.1;locus_tag=LDO49_RS31105;product=T6SS effector phospholipase Tle3 domain-containing protein;protein_id=WP_060155118.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 67723 69222 . + . ID=gene-LDO49_RS31110;Name=LDO49_RS31110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31110;old_locus_tag=BCEP4_640070 NZ_CAJZAV010000273.1 Protein Homology CDS 67723 69222 . + 0 ID=cds-WP_060155115.1;Parent=gene-LDO49_RS31110;Dbxref=GenBank:WP_060155115.1;Name=WP_060155115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011003106.1;locus_tag=LDO49_RS31110;product=hypothetical protein;protein_id=WP_060155115.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 69301 69549 . + . ID=gene-LDO49_RS31115;Name=LDO49_RS31115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31115;old_locus_tag=BCEP4_640071 NZ_CAJZAV010000273.1 GeneMarkS-2+ CDS 69301 69549 . + 0 ID=cds-WP_060155113.1;Parent=gene-LDO49_RS31115;Dbxref=GenBank:WP_060155113.1;Name=WP_060155113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS31115;product=hypothetical protein;protein_id=WP_060155113.1;transl_table=11 NZ_CAJZAV010000273.1 RefSeq gene 69655 69912 . + . ID=gene-LDO49_RS31120;Name=LDO49_RS31120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31120;old_locus_tag=BCEP4_640072 NZ_CAJZAV010000273.1 Protein Homology CDS 69655 69912 . + 0 ID=cds-WP_048022903.1;Parent=gene-LDO49_RS31120;Dbxref=GenBank:WP_048022903.1;Name=WP_048022903.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853218.1;locus_tag=LDO49_RS31120;product=PAAR domain-containing protein;protein_id=WP_048022903.1;transl_table=11 ##sequence-region NZ_CAJZAV010000274.1 1 59004 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000274.1 RefSeq region 1 59004 . + . ID=NZ_CAJZAV010000274.1:1..59004;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_65 NZ_CAJZAV010000274.1 RefSeq gene 1 502 . + . ID=gene-LDO49_RS31125;Name=LDO49_RS31125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31125;old_locus_tag=BCEP4_650001;partial=true;start_range=.,1 NZ_CAJZAV010000274.1 Protein Homology CDS 1 502 . + 1 ID=cds-WP_224052694.1;Parent=gene-LDO49_RS31125;Dbxref=GenBank:WP_224052694.1;Name=WP_224052694.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354223.1;locus_tag=LDO49_RS31125;partial=true;product=alpha/beta hydrolase fold domain-containing protein;protein_id=WP_224052694.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 525 1718 . + . ID=gene-LDO49_RS31130;Name=LDO49_RS31130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31130;old_locus_tag=BCEP4_650002 NZ_CAJZAV010000274.1 Protein Homology CDS 525 1718 . + 0 ID=cds-WP_060072025.1;Parent=gene-LDO49_RS31130;Dbxref=GenBank:WP_060072025.1;Name=WP_060072025.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756115.1;locus_tag=LDO49_RS31130;product=TauD/TfdA family dioxygenase;protein_id=WP_060072025.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 1984 3936 . - . ID=gene-LDO49_RS31135;Name=LDO49_RS31135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31135;old_locus_tag=BCEP4_650003 NZ_CAJZAV010000274.1 Protein Homology CDS 1984 3936 . - 0 ID=cds-WP_081067238.1;Parent=gene-LDO49_RS31135;Dbxref=GenBank:WP_081067238.1;Name=WP_081067238.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011402186.1;locus_tag=LDO49_RS31135;product=acyltransferase family protein;protein_id=WP_081067238.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 4632 4931 . - . ID=gene-LDO49_RS31140;Name=LDO49_RS31140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31140;old_locus_tag=BCEP4_650005 NZ_CAJZAV010000274.1 Protein Homology CDS 4632 4931 . - 0 ID=cds-WP_021161448.1;Parent=gene-LDO49_RS31140;Dbxref=GenBank:WP_021161448.1;Name=WP_021161448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723947.1;locus_tag=LDO49_RS31140;product=DUF4148 domain-containing protein;protein_id=WP_021161448.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 5146 6132 . - . ID=gene-LDO49_RS31145;Name=LDO49_RS31145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31145;old_locus_tag=BCEP4_650006 NZ_CAJZAV010000274.1 Protein Homology CDS 5146 6132 . - 0 ID=cds-WP_059552756.1;Parent=gene-LDO49_RS31145;Dbxref=GenBank:WP_059552756.1;Name=WP_059552756.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339563.1;locus_tag=LDO49_RS31145;product=oxidoreductase;protein_id=WP_059552756.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 6300 6590 . - . ID=gene-LDO49_RS31150;Name=LDO49_RS31150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31150;old_locus_tag=BCEP4_650007 NZ_CAJZAV010000274.1 Protein Homology CDS 6300 6590 . - 0 ID=cds-WP_060072023.1;Parent=gene-LDO49_RS31150;Dbxref=GenBank:WP_060072023.1;Name=WP_060072023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547132.1;locus_tag=LDO49_RS31150;product=DUF3331 domain-containing protein;protein_id=WP_060072023.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 7257 8021 . + . ID=gene-LDO49_RS31155;Name=LDO49_RS31155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31155;old_locus_tag=BCEP4_650009 NZ_CAJZAV010000274.1 Protein Homology CDS 7257 8021 . + 0 ID=cds-WP_060072021.1;Parent=gene-LDO49_RS31155;Dbxref=GenBank:WP_060072021.1;Name=WP_060072021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089736.1;locus_tag=LDO49_RS31155;product=SDR family oxidoreductase;protein_id=WP_060072021.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 8065 8907 . + . ID=gene-LDO49_RS31160;Name=LDO49_RS31160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31160;old_locus_tag=BCEP4_650010 NZ_CAJZAV010000274.1 Protein Homology CDS 8065 8907 . + 0 ID=cds-WP_027789693.1;Parent=gene-LDO49_RS31160;Dbxref=GenBank:WP_027789693.1;Name=WP_027789693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898575.1;locus_tag=LDO49_RS31160;product=ureidoglycolate lyase;protein_id=WP_027789693.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 8931 10208 . + . ID=gene-LDO49_RS31165;Name=LDO49_RS31165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31165;old_locus_tag=BCEP4_650011 NZ_CAJZAV010000274.1 Protein Homology CDS 8931 10208 . + 0 ID=cds-WP_060072019.1;Parent=gene-LDO49_RS31165;Dbxref=GenBank:WP_060072019.1;Name=WP_060072019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766342.1;locus_tag=LDO49_RS31165;product=L-fuconate dehydratase;protein_id=WP_060072019.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 10268 11044 . + . ID=gene-LDO49_RS31170;Name=LDO49_RS31170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31170;old_locus_tag=BCEP4_650012 NZ_CAJZAV010000274.1 Protein Homology CDS 10268 11044 . + 0 ID=cds-WP_059489473.1;Parent=gene-LDO49_RS31170;Dbxref=GenBank:WP_059489473.1;Name=WP_059489473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484722.1;locus_tag=LDO49_RS31170;product=SDR family oxidoreductase;protein_id=WP_059489473.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 11057 12595 . + . ID=gene-LDO49_RS31175;Name=LDO49_RS31175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31175;old_locus_tag=BCEP4_650013 NZ_CAJZAV010000274.1 Protein Homology CDS 11057 12595 . + 0 ID=cds-WP_059494866.1;Parent=gene-LDO49_RS31175;Dbxref=GenBank:WP_059494866.1;Name=WP_059494866.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898578.1;locus_tag=LDO49_RS31175;product=sugar ABC transporter ATP-binding protein;protein_id=WP_059494866.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 12627 13664 . + . ID=gene-LDO49_RS31180;Name=LDO49_RS31180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31180;old_locus_tag=BCEP4_650014 NZ_CAJZAV010000274.1 Protein Homology CDS 12627 13664 . + 0 ID=cds-WP_059853346.1;Parent=gene-LDO49_RS31180;Dbxref=GenBank:WP_059853346.1;Name=WP_059853346.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498773.1;locus_tag=LDO49_RS31180;product=ABC transporter permease;protein_id=WP_059853346.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 13745 14686 . + . ID=gene-LDO49_RS31185;Name=LDO49_RS31185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31185;old_locus_tag=BCEP4_650015 NZ_CAJZAV010000274.1 Protein Homology CDS 13745 14686 . + 0 ID=cds-WP_021161439.1;Parent=gene-LDO49_RS31185;Dbxref=GenBank:WP_021161439.1;Name=WP_021161439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339568.1;locus_tag=LDO49_RS31185;product=ABC transporter substrate-binding protein;protein_id=WP_021161439.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 14770 15660 . + . ID=gene-LDO49_RS31190;Name=LDO49_RS31190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31190;old_locus_tag=BCEP4_650016 NZ_CAJZAV010000274.1 Protein Homology CDS 14770 15660 . + 0 ID=cds-WP_059489469.1;Parent=gene-LDO49_RS31190;Dbxref=GenBank:WP_059489469.1;Name=WP_059489469.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547138.1;locus_tag=LDO49_RS31190;product=amidohydrolase family protein;protein_id=WP_059489469.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 15729 16496 . + . ID=gene-LDO49_RS31195;Name=LDO49_RS31195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31195;old_locus_tag=BCEP4_650017 NZ_CAJZAV010000274.1 Protein Homology CDS 15729 16496 . + 0 ID=cds-WP_060072018.1;Parent=gene-LDO49_RS31195;Dbxref=GenBank:WP_060072018.1;Name=WP_060072018.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756124.1;locus_tag=LDO49_RS31195;product=FadR/GntR family transcriptional regulator;protein_id=WP_060072018.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 16520 17761 . - . ID=gene-LDO49_RS31200;Name=LDO49_RS31200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31200;old_locus_tag=BCEP4_650018 NZ_CAJZAV010000274.1 Protein Homology CDS 16520 17761 . - 0 ID=cds-WP_124475107.1;Parent=gene-LDO49_RS31200;Dbxref=GenBank:WP_124475107.1;Name=WP_124475107.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414028.1;locus_tag=LDO49_RS31200;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_124475107.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 17904 19265 . - . ID=gene-LDO49_RS31205;Name=LDO49_RS31205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31205;old_locus_tag=BCEP4_650019 NZ_CAJZAV010000274.1 Protein Homology CDS 17904 19265 . - 0 ID=cds-WP_224052695.1;Parent=gene-LDO49_RS31205;Dbxref=GenBank:WP_224052695.1;Name=WP_224052695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007732350.1;locus_tag=LDO49_RS31205;product=hypothetical protein;protein_id=WP_224052695.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 19789 20502 . + . ID=gene-LDO49_RS31210;Name=LDO49_RS31210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31210;old_locus_tag=BCEP4_650020 NZ_CAJZAV010000274.1 Protein Homology CDS 19789 20502 . + 0 ID=cds-WP_060072015.1;Parent=gene-LDO49_RS31210;Dbxref=GenBank:WP_060072015.1;Name=WP_060072015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498789.1;locus_tag=LDO49_RS31210;product=YfiR family protein;protein_id=WP_060072015.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 20499 21767 . + . ID=gene-LDO49_RS31215;Name=LDO49_RS31215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31215;old_locus_tag=BCEP4_650021 NZ_CAJZAV010000274.1 Protein Homology CDS 20499 21767 . + 0 ID=cds-WP_059489460.1;Parent=gene-LDO49_RS31215;Dbxref=GenBank:WP_059489460.1;Name=WP_059489460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484728.1;locus_tag=LDO49_RS31215;product=diguanylate cyclase domain-containing protein;protein_id=WP_059489460.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 21853 22362 . + . ID=gene-LDO49_RS31220;Name=LDO49_RS31220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31220;old_locus_tag=BCEP4_650022 NZ_CAJZAV010000274.1 Protein Homology CDS 21853 22362 . + 0 ID=cds-WP_021161431.1;Parent=gene-LDO49_RS31220;Dbxref=GenBank:WP_021161431.1;Name=WP_021161431.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547147.1;locus_tag=LDO49_RS31220;product=OmpA family protein;protein_id=WP_021161431.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 22763 24901 . + . ID=gene-LDO49_RS31225;Name=LDO49_RS31225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31225;old_locus_tag=BCEP4_650023 NZ_CAJZAV010000274.1 Protein Homology CDS 22763 24901 . + 0 ID=cds-WP_060072013.1;Parent=gene-LDO49_RS31225;Dbxref=GenBank:WP_060072013.1;Name=WP_060072013.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012211021.1;locus_tag=LDO49_RS31225;product=type VI secretion system Vgr family protein;protein_id=WP_060072013.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 24919 25377 . + . ID=gene-LDO49_RS31230;Name=LDO49_RS31230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31230;old_locus_tag=BCEP4_650024 NZ_CAJZAV010000274.1 Protein Homology CDS 24919 25377 . + 0 ID=cds-WP_059497124.1;Parent=gene-LDO49_RS31230;Dbxref=GenBank:WP_059497124.1;Name=WP_059497124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354255.1;locus_tag=LDO49_RS31230;product=DcrB-related protein;protein_id=WP_059497124.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 25374 29705 . + . ID=gene-LDO49_RS31235;Name=LDO49_RS31235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31235;old_locus_tag=BCEP4_650025 NZ_CAJZAV010000274.1 Protein Homology CDS 25374 29705 . + 0 ID=cds-WP_224052696.1;Parent=gene-LDO49_RS31235;Dbxref=GenBank:WP_224052696.1;Name=WP_224052696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354256.1;locus_tag=LDO49_RS31235;product=RHS repeat-associated core domain-containing protein;protein_id=WP_224052696.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 29702 30055 . + . ID=gene-LDO49_RS31240;Name=LDO49_RS31240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31240 NZ_CAJZAV010000274.1 GeneMarkS-2+ CDS 29702 30055 . + 0 ID=cds-WP_063812001.1;Parent=gene-LDO49_RS31240;Dbxref=GenBank:WP_063812001.1;Name=WP_063812001.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS31240;product=hypothetical protein;protein_id=WP_063812001.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 30472 30642 . + . ID=gene-LDO49_RS31245;Name=LDO49_RS31245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31245;old_locus_tag=BCEP4_650028 NZ_CAJZAV010000274.1 Protein Homology CDS 30472 30642 . + 0 ID=cds-WP_081067237.1;Parent=gene-LDO49_RS31245;Dbxref=GenBank:WP_081067237.1;Name=WP_081067237.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03696.1;locus_tag=LDO49_RS31245;product=RHS repeat-associated core domain-containing protein;protein_id=WP_081067237.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 30745 31005 . + . ID=gene-LDO49_RS37650;Name=LDO49_RS37650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37650 NZ_CAJZAV010000274.1 Protein Homology CDS 30745 31005 . + 0 ID=cds-WP_224052702.1;Parent=gene-LDO49_RS37650;Dbxref=GenBank:WP_224052702.1;Name=WP_224052702.1;Ontology_term=GO:0003723,GO:0004521;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;inference=COORDINATES: protein motif:HMM:NF012755.6;locus_tag=LDO49_RS37650;product=ribonuclease domain-containing protein;protein_id=WP_224052702.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 31009 31413 . + . ID=gene-LDO49_RS31255;Name=LDO49_RS31255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31255 NZ_CAJZAV010000274.1 Protein Homology CDS 31009 31413 . + 0 ID=cds-WP_081067235.1;Parent=gene-LDO49_RS31255;Dbxref=GenBank:WP_081067235.1;Name=WP_081067235.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013500.6;locus_tag=LDO49_RS31255;product=barstar family protein;protein_id=WP_081067235.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 31662 32120 . + . ID=gene-LDO49_RS31260;Name=LDO49_RS31260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31260;old_locus_tag=BCEP4_650029 NZ_CAJZAV010000274.1 GeneMarkS-2+ CDS 31662 32120 . + 0 ID=cds-WP_124866535.1;Parent=gene-LDO49_RS31260;Dbxref=GenBank:WP_124866535.1;Name=WP_124866535.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS31260;product=hypothetical protein;protein_id=WP_124866535.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 32235 32858 . + . ID=gene-LDO49_RS31265;Name=LDO49_RS31265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31265;old_locus_tag=BCEP4_650030 NZ_CAJZAV010000274.1 GeneMarkS-2+ CDS 32235 32858 . + 0 ID=cds-WP_124475109.1;Parent=gene-LDO49_RS31265;Dbxref=GenBank:WP_124475109.1;Name=WP_124475109.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS31265;product=hypothetical protein;protein_id=WP_124475109.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 33317 33808 . + . ID=gene-LDO49_RS31270;Name=LDO49_RS31270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31270;old_locus_tag=BCEP4_650032 NZ_CAJZAV010000274.1 GeneMarkS-2+ CDS 33317 33808 . + 0 ID=cds-WP_124842180.1;Parent=gene-LDO49_RS31270;Dbxref=GenBank:WP_124842180.1;Name=WP_124842180.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS31270;product=hypothetical protein;protein_id=WP_124842180.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 34078 34641 . + . ID=gene-LDO49_RS31275;Name=LDO49_RS31275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31275;old_locus_tag=BCEP4_650034 NZ_CAJZAV010000274.1 Protein Homology CDS 34078 34641 . + 0 ID=cds-WP_224052697.1;Parent=gene-LDO49_RS31275;Dbxref=GenBank:WP_224052697.1;Name=WP_224052697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354257.1;locus_tag=LDO49_RS31275;product=hypothetical protein;protein_id=WP_224052697.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 34798 35136 . + . ID=gene-LDO49_RS31280;Name=LDO49_RS31280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31280 NZ_CAJZAV010000274.1 Protein Homology CDS 34798 35136 . + 0 ID=cds-WP_124475112.1;Parent=gene-LDO49_RS31280;Dbxref=GenBank:WP_124475112.1;Name=WP_124475112.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049362.1;locus_tag=LDO49_RS31280;product=DUF7716 domain-containing protein;protein_id=WP_124475112.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 35358 35627 . + . ID=gene-LDO49_RS31285;Name=LDO49_RS31285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31285 NZ_CAJZAV010000274.1 GeneMarkS-2+ CDS 35358 35627 . + 0 ID=cds-WP_224052698.1;Parent=gene-LDO49_RS31285;Dbxref=GenBank:WP_224052698.1;Name=WP_224052698.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS31285;product=hypothetical protein;protein_id=WP_224052698.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 35756 35959 . - . ID=gene-LDO49_RS31290;Name=LDO49_RS31290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31290 NZ_CAJZAV010000274.1 GeneMarkS-2+ CDS 35756 35959 . - 0 ID=cds-WP_124475113.1;Parent=gene-LDO49_RS31290;Dbxref=GenBank:WP_124475113.1;Name=WP_124475113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS31290;product=hypothetical protein;protein_id=WP_124475113.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 36475 36693 . + . ID=gene-LDO49_RS31295;Name=LDO49_RS31295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31295;old_locus_tag=BCEP4_650037 NZ_CAJZAV010000274.1 Protein Homology CDS 36475 36693 . + 0 ID=cds-WP_060072009.1;Parent=gene-LDO49_RS31295;Dbxref=GenBank:WP_060072009.1;Name=WP_060072009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762696.1;locus_tag=LDO49_RS31295;product=hypothetical protein;protein_id=WP_060072009.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 36780 37403 . - . ID=gene-LDO49_RS31300;Name=LDO49_RS31300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31300;old_locus_tag=BCEP4_650038 NZ_CAJZAV010000274.1 Protein Homology CDS 36780 37403 . - 0 ID=cds-WP_060072006.1;Parent=gene-LDO49_RS31300;Dbxref=GenBank:WP_060072006.1;Name=WP_060072006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367248.1;locus_tag=LDO49_RS31300;product=hypothetical protein;protein_id=WP_060072006.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 37430 37789 . + . ID=gene-LDO49_RS31305;Name=LDO49_RS31305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31305;old_locus_tag=BCEP4_650039 NZ_CAJZAV010000274.1 GeneMarkS-2+ CDS 37430 37789 . + 0 ID=cds-WP_124475114.1;Parent=gene-LDO49_RS31305;Dbxref=GenBank:WP_124475114.1;Name=WP_124475114.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS31305;product=hypothetical protein;protein_id=WP_124475114.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 38215 39333 . + . ID=gene-LDO49_RS31310;Name=LDO49_RS31310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31310;old_locus_tag=BCEP4_650042 NZ_CAJZAV010000274.1 Protein Homology CDS 38215 39333 . + 0 ID=cds-WP_027789675.1;Parent=gene-LDO49_RS31310;Dbxref=GenBank:WP_027789675.1;Name=WP_027789675.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898592.1;locus_tag=LDO49_RS31310;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_027789675.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 39518 40444 . + . ID=gene-LDO49_RS31315;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=LDO49_RS31315;old_locus_tag=BCEP4_650043 NZ_CAJZAV010000274.1 Protein Homology CDS 39518 40444 . + 0 ID=cds-WP_027789674.1;Parent=gene-LDO49_RS31315;Dbxref=GenBank:WP_027789674.1;Name=WP_027789674.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523160.1;locus_tag=LDO49_RS31315;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_027789674.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 40456 41727 . + . ID=gene-LDO49_RS31320;Name=LDO49_RS31320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31320;old_locus_tag=BCEP4_650044 NZ_CAJZAV010000274.1 Protein Homology CDS 40456 41727 . + 0 ID=cds-WP_027789673.1;Parent=gene-LDO49_RS31320;Dbxref=GenBank:WP_027789673.1;Name=WP_027789673.1;Ontology_term=GO:0015658,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089869.1;locus_tag=LDO49_RS31320;product=high-affinity branched-chain amino acid ABC transporter permease LivM;protein_id=WP_027789673.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 41724 42497 . + . ID=gene-LDO49_RS31325;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=LDO49_RS31325;old_locus_tag=BCEP4_650045 NZ_CAJZAV010000274.1 Protein Homology CDS 41724 42497 . + 0 ID=cds-WP_224052699.1;Parent=gene-LDO49_RS31325;Dbxref=GenBank:WP_224052699.1;Name=WP_224052699.1;Ontology_term=GO:0005524;gbkey=CDS;gene=livG;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396442.1;locus_tag=LDO49_RS31325;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_224052699.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 42497 43198 . + . ID=gene-LDO49_RS31330;Name=LDO49_RS31330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31330;old_locus_tag=BCEP4_650046 NZ_CAJZAV010000274.1 Protein Homology CDS 42497 43198 . + 0 ID=cds-WP_124469418.1;Parent=gene-LDO49_RS31330;Dbxref=GenBank:WP_124469418.1;Name=WP_124469418.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006161614.1;locus_tag=LDO49_RS31330;product=ABC transporter ATP-binding protein;protein_id=WP_124469418.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 43444 43719 . + . ID=gene-LDO49_RS31335;Name=LDO49_RS31335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31335;old_locus_tag=BCEP4_650047 NZ_CAJZAV010000274.1 Protein Homology CDS 43444 43719 . + 0 ID=cds-WP_253074695.1;Parent=gene-LDO49_RS31335;Dbxref=GenBank:WP_253074695.1;Name=WP_253074695.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF013088.7;locus_tag=LDO49_RS31335;product=EamA family transporter;protein_id=WP_253074695.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 43786 44136 . + . ID=gene-LDO49_RS31340;Name=LDO49_RS31340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31340;old_locus_tag=BCEP4_650048 NZ_CAJZAV010000274.1 Protein Homology CDS 43786 44136 . + 0 ID=cds-WP_059619430.1;Parent=gene-LDO49_RS31340;Dbxref=GenBank:WP_059619430.1;Name=WP_059619430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484732.1;locus_tag=LDO49_RS31340;product=VOC family protein;protein_id=WP_059619430.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 44164 44571 . - . ID=gene-LDO49_RS31345;Name=LDO49_RS31345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31345;old_locus_tag=BCEP4_650049 NZ_CAJZAV010000274.1 Protein Homology CDS 44164 44571 . - 0 ID=cds-WP_193093976.1;Parent=gene-LDO49_RS31345;Dbxref=GenBank:WP_193093976.1;Name=WP_193093976.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065664.1;locus_tag=LDO49_RS31345;product=DUF2000 family protein;protein_id=WP_193093976.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 44616 45479 . - . ID=gene-LDO49_RS31350;Name=LDO49_RS31350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31350;old_locus_tag=BCEP4_650050 NZ_CAJZAV010000274.1 Protein Homology CDS 44616 45479 . - 0 ID=cds-WP_059485206.1;Parent=gene-LDO49_RS31350;Dbxref=GenBank:WP_059485206.1;Name=WP_059485206.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216521.1;locus_tag=LDO49_RS31350;product=AraC family transcriptional regulator;protein_id=WP_059485206.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 45569 46546 . - . ID=gene-LDO49_RS31355;Name=LDO49_RS31355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31355;old_locus_tag=BCEP4_650051 NZ_CAJZAV010000274.1 Protein Homology CDS 45569 46546 . - 0 ID=cds-WP_060072002.1;Parent=gene-LDO49_RS31355;Dbxref=GenBank:WP_060072002.1;Name=WP_060072002.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547163.1;locus_tag=LDO49_RS31355;product=AraC family transcriptional regulator;protein_id=WP_060072002.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 46595 47344 . + . ID=gene-LDO49_RS31360;Name=LDO49_RS31360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31360;old_locus_tag=BCEP4_650052 NZ_CAJZAV010000274.1 Protein Homology CDS 46595 47344 . + 0 ID=cds-WP_048024789.1;Parent=gene-LDO49_RS31360;Dbxref=GenBank:WP_048024789.1;Name=WP_048024789.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011494458.1;locus_tag=LDO49_RS31360;product=SDR family oxidoreductase;protein_id=WP_048024789.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 47426 48727 . - . ID=gene-LDO49_RS31365;Name=LDO49_RS31365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31365;old_locus_tag=BCEP4_650053 NZ_CAJZAV010000274.1 Protein Homology CDS 47426 48727 . - 0 ID=cds-WP_060072000.1;Parent=gene-LDO49_RS31365;Dbxref=GenBank:WP_060072000.1;Name=WP_060072000.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007176061.1;locus_tag=LDO49_RS31365;product=aspartate aminotransferase family protein;protein_id=WP_060072000.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 48805 49689 . + . ID=gene-LDO49_RS31370;Name=LDO49_RS31370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31370;old_locus_tag=BCEP4_650054 NZ_CAJZAV010000274.1 Protein Homology CDS 48805 49689 . + 0 ID=cds-WP_081052663.1;Parent=gene-LDO49_RS31370;Dbxref=GenBank:WP_081052663.1;Name=WP_081052663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493511.1;locus_tag=LDO49_RS31370;product=LysR family transcriptional regulator;protein_id=WP_081052663.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 49715 51160 . - . ID=gene-LDO49_RS31375;Name=LDO49_RS31375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31375;old_locus_tag=BCEP4_650055 NZ_CAJZAV010000274.1 Protein Homology CDS 49715 51160 . - 0 ID=cds-WP_060071998.1;Parent=gene-LDO49_RS31375;Dbxref=GenBank:WP_060071998.1;Name=WP_060071998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339594.1;locus_tag=LDO49_RS31375;product=isochorismate synthase;protein_id=WP_060071998.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 51157 51462 . - . ID=gene-LDO49_RS31380;Name=LDO49_RS31380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31380;old_locus_tag=BCEP4_650056 NZ_CAJZAV010000274.1 Protein Homology CDS 51157 51462 . - 0 ID=cds-WP_060071997.1;Parent=gene-LDO49_RS31380;Dbxref=GenBank:WP_060071997.1;Name=WP_060071997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523171.1;locus_tag=LDO49_RS31380;product=isochorismate lyase;protein_id=WP_060071997.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 51459 52232 . - . ID=gene-LDO49_RS31385;Name=LDO49_RS31385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31385;old_locus_tag=BCEP4_650057 NZ_CAJZAV010000274.1 Protein Homology CDS 51459 52232 . - 0 ID=cds-WP_060071995.1;Parent=gene-LDO49_RS31385;Dbxref=GenBank:WP_060071995.1;Name=WP_060071995.1;Ontology_term=GO:0009058;gbkey=CDS;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339595.1;locus_tag=LDO49_RS31385;product=thioesterase II family protein;protein_id=WP_060071995.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 52229 53881 . - . ID=gene-LDO49_RS31390;Name=LDO49_RS31390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31390;old_locus_tag=BCEP4_650058 NZ_CAJZAV010000274.1 Protein Homology CDS 52229 53881 . - 0 ID=cds-WP_060071993.1;Parent=gene-LDO49_RS31390;Dbxref=GenBank:WP_060071993.1;Name=WP_060071993.1;Ontology_term=GO:0019290,GO:0008668;gbkey=CDS;go_function=2%2C3-dihydroxybenzoate--[aryl-carrier protein] ligase|0008668||IEA;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694812.1;locus_tag=LDO49_RS31390;product=(2%2C3-dihydroxybenzoyl)adenylate synthase;protein_id=WP_060071993.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 54099 55040 . + . ID=gene-LDO49_RS31395;Name=LDO49_RS31395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31395;old_locus_tag=BCEP4_650059 NZ_CAJZAV010000274.1 Protein Homology CDS 54099 55040 . + 0 ID=cds-WP_021163802.1;Parent=gene-LDO49_RS31395;Dbxref=GenBank:WP_021163802.1;Name=WP_021163802.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009897983.1;locus_tag=LDO49_RS31395;product=helix-turn-helix transcriptional regulator;protein_id=WP_021163802.1;transl_table=11 NZ_CAJZAV010000274.1 RefSeq gene 55164 59004 . + . ID=gene-LDO49_RS31400;Name=LDO49_RS31400;end_range=59004,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31400;partial=true NZ_CAJZAV010000274.1 Protein Homology CDS 55164 59004 . + 0 ID=cds-WP_224052701.1;Parent=gene-LDO49_RS31400;Dbxref=GenBank:WP_224052701.1;Name=WP_224052701.1;end_range=59004,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493508.1;locus_tag=LDO49_RS31400;partial=true;product=non-ribosomal peptide synthetase;protein_id=WP_224052701.1;transl_table=11 ##sequence-region NZ_CAJZAV010000275.1 1 13157 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000275.1 RefSeq region 1 13157 . + . ID=NZ_CAJZAV010000275.1:1..13157;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_66 NZ_CAJZAV010000275.1 RefSeq gene 1 1047 . - . ID=gene-LDO49_RS31405;Name=LDO49_RS31405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31405;partial=true;start_range=.,1 NZ_CAJZAV010000275.1 Protein Homology CDS 1 1047 . - 0 ID=cds-WP_224052703.1;Parent=gene-LDO49_RS31405;Dbxref=GenBank:WP_224052703.1;Name=WP_224052703.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411212.1;locus_tag=LDO49_RS31405;partial=true;product=MFS transporter;protein_id=WP_224052703.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000275.1 RefSeq gene 1044 1379 . - . ID=gene-LDO49_RS31410;Name=LDO49_RS31410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31410;old_locus_tag=BCEP4_660002 NZ_CAJZAV010000275.1 Protein Homology CDS 1044 1379 . - 0 ID=cds-WP_224052704.1;Parent=gene-LDO49_RS31410;Dbxref=GenBank:WP_224052704.1;Name=WP_224052704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479106.1;locus_tag=LDO49_RS31410;product=hypothetical protein;protein_id=WP_224052704.1;transl_table=11 NZ_CAJZAV010000275.1 RefSeq gene 1417 1887 . - . ID=gene-LDO49_RS31415;Name=LDO49_RS31415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31415;old_locus_tag=BCEP4_660003 NZ_CAJZAV010000275.1 Protein Homology CDS 1417 1887 . - 0 ID=cds-WP_060159052.1;Parent=gene-LDO49_RS31415;Dbxref=GenBank:WP_060159052.1;Name=WP_060159052.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397143.1;locus_tag=LDO49_RS31415;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_060159052.1;transl_table=11 NZ_CAJZAV010000275.1 RefSeq gene 2056 2547 . + . ID=gene-LDO49_RS31420;Name=LDO49_RS31420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31420;old_locus_tag=BCEP4_660004 NZ_CAJZAV010000275.1 Protein Homology CDS 2056 2547 . + 0 ID=cds-WP_048023098.1;Parent=gene-LDO49_RS31420;Dbxref=GenBank:WP_048023098.1;Name=WP_048023098.1;Ontology_term=GO:0016702,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of two atoms of oxygen|0016702||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547776.1;locus_tag=LDO49_RS31420;product=2%2C4'-dihydroxyacetophenone dioxygenase family protein;protein_id=WP_048023098.1;transl_table=11 NZ_CAJZAV010000275.1 RefSeq gene 2650 3798 . - . ID=gene-LDO49_RS31425;Name=LDO49_RS31425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31425;old_locus_tag=BCEP4_660005 NZ_CAJZAV010000275.1 Protein Homology CDS 2650 3798 . - 0 ID=cds-WP_059623079.1;Parent=gene-LDO49_RS31425;Dbxref=GenBank:WP_059623079.1;Name=WP_059623079.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479109.1;locus_tag=LDO49_RS31425;product=epoxide hydrolase family protein;protein_id=WP_059623079.1;transl_table=11 NZ_CAJZAV010000275.1 RefSeq gene 3876 4847 . - . ID=gene-LDO49_RS31430;Name=LDO49_RS31430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31430;old_locus_tag=BCEP4_660006 NZ_CAJZAV010000275.1 Protein Homology CDS 3876 4847 . - 0 ID=cds-WP_059861330.1;Parent=gene-LDO49_RS31430;Dbxref=GenBank:WP_059861330.1;Name=WP_059861330.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338225.1;locus_tag=LDO49_RS31430;product=GlxA family transcriptional regulator;protein_id=WP_059861330.1;transl_table=11 NZ_CAJZAV010000275.1 RefSeq gene 4984 5784 . + . ID=gene-LDO49_RS31435;Name=LDO49_RS31435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31435;old_locus_tag=BCEP4_660007 NZ_CAJZAV010000275.1 Protein Homology CDS 4984 5784 . + 0 ID=cds-WP_175850473.1;Parent=gene-LDO49_RS31435;Dbxref=GenBank:WP_175850473.1;Name=WP_175850473.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762186.1;locus_tag=LDO49_RS31435;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_175850473.1;transl_table=11 NZ_CAJZAV010000275.1 RefSeq gene 6510 7937 . + . ID=gene-LDO49_RS31440;Name=LDO49_RS31440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31440;old_locus_tag=BCEP4_660008 NZ_CAJZAV010000275.1 Protein Homology CDS 6510 7937 . + 0 ID=cds-WP_372585882.1;Parent=gene-LDO49_RS31440;Dbxref=GenBank:WP_372585882.1;Name=WP_372585882.1;Ontology_term=GO:0007165,GO:0005515,GO:0005525,GO:0046872,GO:0052621;gbkey=CDS;go_function=protein binding|0005515||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:TIGR00254.1;locus_tag=LDO49_RS31440;product=sensor domain-containing diguanylate cyclase;protein_id=WP_372585882.1;transl_table=11 NZ_CAJZAV010000275.1 RefSeq gene 8083 8379 . + . ID=gene-LDO49_RS31445;Name=LDO49_RS31445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31445;old_locus_tag=BCEP4_660009 NZ_CAJZAV010000275.1 GeneMarkS-2+ CDS 8083 8379 . + 0 ID=cds-WP_048023105.1;Parent=gene-LDO49_RS31445;Dbxref=GenBank:WP_048023105.1;Name=WP_048023105.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS31445;product=hypothetical protein;protein_id=WP_048023105.1;transl_table=11 NZ_CAJZAV010000275.1 RefSeq gene 8401 9768 . - . ID=gene-LDO49_RS31450;Name=LDO49_RS31450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31450;old_locus_tag=BCEP4_660010 NZ_CAJZAV010000275.1 Protein Homology CDS 8401 9768 . - 0 ID=cds-WP_224052706.1;Parent=gene-LDO49_RS31450;Dbxref=GenBank:WP_224052706.1;Name=WP_224052706.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355311.1;locus_tag=LDO49_RS31450;product=MFS transporter;protein_id=WP_224052706.1;transl_table=11 NZ_CAJZAV010000275.1 RefSeq gene 9856 11205 . - . ID=gene-LDO49_RS31455;Name=LDO49_RS31455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31455;old_locus_tag=BCEP4_660012 NZ_CAJZAV010000275.1 Protein Homology CDS 9856 11205 . - 0 ID=cds-WP_224052707.1;Parent=gene-LDO49_RS31455;Dbxref=GenBank:WP_224052707.1;Name=WP_224052707.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355312.1;locus_tag=LDO49_RS31455;product=MFS transporter;protein_id=WP_224052707.1;transl_table=11 NZ_CAJZAV010000275.1 RefSeq gene 11386 12345 . - . ID=gene-LDO49_RS31460;Name=LDO49_RS31460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31460;old_locus_tag=BCEP4_660013 NZ_CAJZAV010000275.1 Protein Homology CDS 11386 12345 . - 0 ID=cds-WP_224052708.1;Parent=gene-LDO49_RS31460;Dbxref=GenBank:WP_224052708.1;Name=WP_224052708.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018422163.1;locus_tag=LDO49_RS31460;product=MBL fold metallo-hydrolase;protein_id=WP_224052708.1;transl_table=11 NZ_CAJZAV010000275.1 RefSeq gene 12523 13157 . + . ID=gene-LDO49_RS31465;Name=LDO49_RS31465;end_range=13157,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31465;partial=true NZ_CAJZAV010000275.1 Protein Homology CDS 12523 13157 . + 0 ID=cds-WP_224052709.1;Parent=gene-LDO49_RS31465;Dbxref=GenBank:WP_224052709.1;Name=WP_224052709.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=13157,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467913.1;locus_tag=LDO49_RS31465;partial=true;product=IclR family transcriptional regulator;protein_id=WP_224052709.1;transl_table=11 ##sequence-region NZ_CAJZAV010000276.1 1 34463 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000276.1 RefSeq region 1 34463 . + . ID=NZ_CAJZAV010000276.1:1..34463;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_67 NZ_CAJZAV010000276.1 RefSeq pseudogene 1 157 . - . ID=gene-LDO49_RS38365;Name=LDO49_RS38365;end_range=157,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38365;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000276.1 Protein Homology CDS 1 157 . - 1 ID=cds-LDO49_RS38365;Parent=gene-LDO49_RS38365;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=157,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366538.1;locus_tag=LDO49_RS38365;partial=true;product=SPFH domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 168 722 . - . ID=gene-LDO49_RS31470;Name=LDO49_RS31470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31470;old_locus_tag=BCEP4_670002;partial=true;start_range=.,168 NZ_CAJZAV010000276.1 Protein Homology CDS 168 722 . - 0 ID=cds-WP_372585883.1;Parent=gene-LDO49_RS31470;Dbxref=GenBank:WP_372585883.1;Name=WP_372585883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013395021.1;locus_tag=LDO49_RS31470;partial=true;product=SPFH domain-containing protein;protein_id=WP_372585883.1;start_range=.,168;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 750 1136 . - . ID=gene-LDO49_RS31475;Name=LDO49_RS31475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31475;old_locus_tag=BCEP4_670003 NZ_CAJZAV010000276.1 Protein Homology CDS 750 1136 . - 0 ID=cds-WP_021163477.1;Parent=gene-LDO49_RS31475;Dbxref=GenBank:WP_021163477.1;Name=WP_021163477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480820.1;locus_tag=LDO49_RS31475;product=DUF350 domain-containing protein;protein_id=WP_021163477.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 1258 2772 . + . ID=gene-LDO49_RS31480;Name=LDO49_RS31480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31480;old_locus_tag=BCEP4_670004 NZ_CAJZAV010000276.1 Protein Homology CDS 1258 2772 . + 0 ID=cds-WP_060070459.1;Parent=gene-LDO49_RS31480;Dbxref=GenBank:WP_060070459.1;Name=WP_060070459.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498965.1;locus_tag=LDO49_RS31480;product=polyamine aminopropyltransferase;protein_id=WP_060070459.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 2772 4391 . + . ID=gene-LDO49_RS31485;Name=LDO49_RS31485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31485;old_locus_tag=BCEP4_670005 NZ_CAJZAV010000276.1 Protein Homology CDS 2772 4391 . + 0 ID=cds-WP_060070462.1;Parent=gene-LDO49_RS31485;Dbxref=GenBank:WP_060070462.1;Name=WP_060070462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366541.1;locus_tag=LDO49_RS31485;product=NAD(P)-binding protein;protein_id=WP_060070462.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 4516 5280 . + . ID=gene-LDO49_RS31490;Name=LDO49_RS31490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31490;old_locus_tag=BCEP4_670006 NZ_CAJZAV010000276.1 Protein Homology CDS 4516 5280 . + 0 ID=cds-WP_060070466.1;Parent=gene-LDO49_RS31490;Dbxref=GenBank:WP_060070466.1;Name=WP_060070466.1;Ontology_term=GO:0008745,GO:0046872;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490270.1;locus_tag=LDO49_RS31490;product=N-acetylmuramoyl-L-alanine amidase family protein;protein_id=WP_060070466.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 5335 5724 . + . ID=gene-LDO49_RS31495;Name=LDO49_RS31495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31495;old_locus_tag=BCEP4_670007 NZ_CAJZAV010000276.1 Protein Homology CDS 5335 5724 . + 0 ID=cds-WP_021163471.1;Parent=gene-LDO49_RS31495;Dbxref=GenBank:WP_021163471.1;Name=WP_021163471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547257.1;locus_tag=LDO49_RS31495;product=lysozyme inhibitor LprI family protein;protein_id=WP_021163471.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 5787 6365 . + . ID=gene-LDO49_RS31500;Name=LDO49_RS31500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31500;old_locus_tag=BCEP4_670008 NZ_CAJZAV010000276.1 Protein Homology CDS 5787 6365 . + 0 ID=cds-WP_060070469.1;Parent=gene-LDO49_RS31500;Dbxref=GenBank:WP_060070469.1;Name=WP_060070469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490280.1;locus_tag=LDO49_RS31500;product=hypothetical protein;protein_id=WP_060070469.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 6416 6961 . + . ID=gene-LDO49_RS31505;Name=LDO49_RS31505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31505;old_locus_tag=BCEP4_670009 NZ_CAJZAV010000276.1 Protein Homology CDS 6416 6961 . + 0 ID=cds-WP_060070472.1;Parent=gene-LDO49_RS31505;Dbxref=GenBank:WP_060070472.1;Name=WP_060070472.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490295.1;locus_tag=LDO49_RS31505;product=GNAT family N-acetyltransferase;protein_id=WP_060070472.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 6941 7876 . - . ID=gene-LDO49_RS31510;Name=LDO49_RS31510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31510;old_locus_tag=BCEP4_670010 NZ_CAJZAV010000276.1 Protein Homology CDS 6941 7876 . - 0 ID=cds-WP_060070561.1;Parent=gene-LDO49_RS31510;Dbxref=GenBank:WP_060070561.1;Name=WP_060070561.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493478.1;locus_tag=LDO49_RS31510;product=LysR family transcriptional regulator;protein_id=WP_060070561.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 8026 9198 . + . ID=gene-LDO49_RS31515;Name=LDO49_RS31515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31515;old_locus_tag=BCEP4_670011 NZ_CAJZAV010000276.1 Protein Homology CDS 8026 9198 . + 0 ID=cds-WP_060070475.1;Parent=gene-LDO49_RS31515;Dbxref=GenBank:WP_060070475.1;Name=WP_060070475.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490372.1;locus_tag=LDO49_RS31515;product=FAD-dependent oxidoreductase;protein_id=WP_060070475.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 9228 10574 . - . ID=gene-LDO49_RS31520;Name=LDO49_RS31520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31520;old_locus_tag=BCEP4_670012 NZ_CAJZAV010000276.1 Protein Homology CDS 9228 10574 . - 0 ID=cds-WP_021163466.1;Parent=gene-LDO49_RS31520;Dbxref=GenBank:WP_021163466.1;Name=WP_021163466.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524,GO:0046872;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216584.1;locus_tag=LDO49_RS31520;product=glutamine synthetase family protein;protein_id=WP_021163466.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 10726 11283 . - . ID=gene-LDO49_RS31525;Name=LDO49_RS31525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31525;old_locus_tag=BCEP4_670013 NZ_CAJZAV010000276.1 Protein Homology CDS 10726 11283 . - 0 ID=cds-WP_021163465.1;Parent=gene-LDO49_RS31525;Dbxref=GenBank:WP_021163465.1;Name=WP_021163465.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659265.1;locus_tag=LDO49_RS31525;product=helix-turn-helix domain-containing protein;protein_id=WP_021163465.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 11301 12590 . - . ID=gene-LDO49_RS31530;Name=LDO49_RS31530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31530;old_locus_tag=BCEP4_670014 NZ_CAJZAV010000276.1 Protein Homology CDS 11301 12590 . - 0 ID=cds-WP_059858277.1;Parent=gene-LDO49_RS31530;Dbxref=GenBank:WP_059858277.1;Name=WP_059858277.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751385.1;locus_tag=LDO49_RS31530;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_059858277.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 13002 14297 . + . ID=gene-LDO49_RS31535;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=LDO49_RS31535;old_locus_tag=BCEP4_670015 NZ_CAJZAV010000276.1 Protein Homology CDS 13002 14297 . + 0 ID=cds-WP_048023297.1;Parent=gene-LDO49_RS31535;Dbxref=GenBank:WP_048023297.1;Name=WP_048023297.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004531661.1;locus_tag=LDO49_RS31535;product=cytosine permease;protein_id=WP_048023297.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 14344 15597 . + . ID=gene-LDO49_RS31540;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=LDO49_RS31540;old_locus_tag=BCEP4_670016 NZ_CAJZAV010000276.1 Protein Homology CDS 14344 15597 . + 0 ID=cds-WP_048023298.1;Parent=gene-LDO49_RS31540;Dbxref=GenBank:WP_048023298.1;Name=WP_048023298.1;Ontology_term=GO:0016810;gbkey=CDS;gene=codA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354408.1;locus_tag=LDO49_RS31540;product=cytosine deaminase;protein_id=WP_048023298.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 15594 16316 . + . ID=gene-LDO49_RS31545;Name=LDO49_RS31545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31545;old_locus_tag=BCEP4_670017 NZ_CAJZAV010000276.1 Protein Homology CDS 15594 16316 . + 0 ID=cds-WP_224052710.1;Parent=gene-LDO49_RS31545;Dbxref=GenBank:WP_224052710.1;Name=WP_224052710.1;Ontology_term=GO:0045892;gbkey=CDS;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354407.1;locus_tag=LDO49_RS31545;product=TetR family transcriptional regulator C-terminal domain-containing protein;protein_id=WP_224052710.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 16380 16817 . - . ID=gene-LDO49_RS31550;Name=LDO49_RS31550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31550;old_locus_tag=BCEP4_670018 NZ_CAJZAV010000276.1 Protein Homology CDS 16380 16817 . - 0 ID=cds-WP_048023301.1;Parent=gene-LDO49_RS31550;Dbxref=GenBank:WP_048023301.1;Name=WP_048023301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880981.1;locus_tag=LDO49_RS31550;product=hypothetical protein;protein_id=WP_048023301.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 17151 17888 . + . ID=gene-LDO49_RS31555;Name=LDO49_RS31555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31555;old_locus_tag=BCEP4_670019 NZ_CAJZAV010000276.1 Protein Homology CDS 17151 17888 . + 0 ID=cds-WP_059488301.1;Parent=gene-LDO49_RS31555;Dbxref=GenBank:WP_059488301.1;Name=WP_059488301.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490854.1;locus_tag=LDO49_RS31555;product=sulfite exporter TauE/SafE family protein;protein_id=WP_059488301.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 18175 19554 . + . ID=gene-LDO49_RS31560;Name=LDO49_RS31560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31560;old_locus_tag=BCEP4_670021 NZ_CAJZAV010000276.1 Protein Homology CDS 18175 19554 . + 0 ID=cds-WP_060048646.1;Parent=gene-LDO49_RS31560;Dbxref=GenBank:WP_060048646.1;Name=WP_060048646.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490861.1;locus_tag=LDO49_RS31560;product=amino acid permease;protein_id=WP_060048646.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 19657 20235 . - . ID=gene-LDO49_RS31565;Name=LDO49_RS31565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31565;old_locus_tag=BCEP4_670022 NZ_CAJZAV010000276.1 Protein Homology CDS 19657 20235 . - 0 ID=cds-WP_060070489.1;Parent=gene-LDO49_RS31565;Dbxref=GenBank:WP_060070489.1;Name=WP_060070489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354393.1;locus_tag=LDO49_RS31565;product=NnrU family protein;protein_id=WP_060070489.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 20554 21219 . - . ID=gene-LDO49_RS31570;Name=LDO49_RS31570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31570;old_locus_tag=BCEP4_670024 NZ_CAJZAV010000276.1 Protein Homology CDS 20554 21219 . - 0 ID=cds-WP_124475217.1;Parent=gene-LDO49_RS31570;Dbxref=GenBank:WP_124475217.1;Name=WP_124475217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547245.1;locus_tag=LDO49_RS31570;product=TfoX/Sxy family protein;protein_id=WP_124475217.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 21216 22325 . - . ID=gene-LDO49_RS31575;Name=LDO49_RS31575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31575;old_locus_tag=BCEP4_670026 NZ_CAJZAV010000276.1 Protein Homology CDS 21216 22325 . - 0 ID=cds-WP_059812788.1;Parent=gene-LDO49_RS31575;Dbxref=GenBank:WP_059812788.1;Name=WP_059812788.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757484.1;locus_tag=LDO49_RS31575;product=malate/lactate/ureidoglycolate dehydrogenase;protein_id=WP_059812788.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 22366 23820 . - . ID=gene-LDO49_RS31580;Name=LDO49_RS31580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31580;old_locus_tag=BCEP4_670027 NZ_CAJZAV010000276.1 Protein Homology CDS 22366 23820 . - 0 ID=cds-WP_021163689.1;Parent=gene-LDO49_RS31580;Dbxref=GenBank:WP_021163689.1;Name=WP_021163689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757485.1;locus_tag=LDO49_RS31580;product=M20 family metallopeptidase;protein_id=WP_021163689.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 23901 24971 . - . ID=gene-LDO49_RS31585;Name=LDO49_RS31585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31585;old_locus_tag=BCEP4_670028 NZ_CAJZAV010000276.1 Protein Homology CDS 23901 24971 . - 0 ID=cds-WP_060070564.1;Parent=gene-LDO49_RS31585;Dbxref=GenBank:WP_060070564.1;Name=WP_060070564.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547243.1;locus_tag=LDO49_RS31585;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_060070564.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 25405 26937 . + . ID=gene-LDO49_RS31590;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=LDO49_RS31590;old_locus_tag=BCEP4_670030 NZ_CAJZAV010000276.1 Protein Homology CDS 25405 26937 . + 0 ID=cds-WP_021163783.1;Parent=gene-LDO49_RS31590;Dbxref=GenBank:WP_021163783.1;Name=WP_021163783.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366594.1;locus_tag=LDO49_RS31590;product=arginine/agmatine antiporter;protein_id=WP_021163783.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 26939 29278 . + . ID=gene-LDO49_RS31595;Name=LDO49_RS31595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31595;old_locus_tag=BCEP4_670031 NZ_CAJZAV010000276.1 Protein Homology CDS 26939 29278 . + 0 ID=cds-WP_021163782.1;Parent=gene-LDO49_RS31595;Dbxref=GenBank:WP_021163782.1;Name=WP_021163782.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659330.1;locus_tag=LDO49_RS31595;product=Orn/Lys/Arg decarboxylase N-terminal domain-containing protein;protein_id=WP_021163782.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 29468 31894 . - . ID=gene-LDO49_RS31600;Name=LDO49_RS31600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31600;old_locus_tag=BCEP4_670032 NZ_CAJZAV010000276.1 Protein Homology CDS 29468 31894 . - 0 ID=cds-WP_224052712.1;Parent=gene-LDO49_RS31600;Dbxref=GenBank:WP_224052712.1;Name=WP_224052712.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025028.6;locus_tag=LDO49_RS31600;product=DKNYY domain-containing protein;protein_id=WP_224052712.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 31983 32957 . - . ID=gene-LDO49_RS31605;Name=ftrA;gbkey=Gene;gene=ftrA;gene_biotype=protein_coding;locus_tag=LDO49_RS31605;old_locus_tag=BCEP4_670033 NZ_CAJZAV010000276.1 Protein Homology CDS 31983 32957 . - 0 ID=cds-WP_224052713.1;Parent=gene-LDO49_RS31605;Dbxref=GenBank:WP_224052713.1;Name=WP_224052713.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ftrA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354386.1;locus_tag=LDO49_RS31605;product=transcriptional regulator FtrA;protein_id=WP_224052713.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 33069 33488 . + . ID=gene-LDO49_RS31610;Name=LDO49_RS31610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31610;old_locus_tag=BCEP4_670034 NZ_CAJZAV010000276.1 Protein Homology CDS 33069 33488 . + 0 ID=cds-WP_224052714.1;Parent=gene-LDO49_RS31610;Dbxref=GenBank:WP_224052714.1;Name=WP_224052714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354385.1;locus_tag=LDO49_RS31610;product=rhodanese-like domain-containing protein;protein_id=WP_224052714.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 33590 33916 . + . ID=gene-LDO49_RS31615;Name=LDO49_RS31615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31615;old_locus_tag=BCEP4_670035 NZ_CAJZAV010000276.1 Protein Homology CDS 33590 33916 . + 0 ID=cds-WP_224052715.1;Parent=gene-LDO49_RS31615;Dbxref=GenBank:WP_224052715.1;Name=WP_224052715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027681.1;locus_tag=LDO49_RS31615;product=superinfection immunity protein;protein_id=WP_224052715.1;transl_table=11 NZ_CAJZAV010000276.1 RefSeq gene 33932 34463 . - . ID=gene-LDO49_RS31620;Name=LDO49_RS31620;end_range=34463,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31620;old_locus_tag=BCEP4_670036;partial=true NZ_CAJZAV010000276.1 Protein Homology CDS 33932 34463 . - 1 ID=cds-WP_224052716.1;Parent=gene-LDO49_RS31620;Dbxref=GenBank:WP_224052716.1;Name=WP_224052716.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;end_range=34463,.;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017328757.1;locus_tag=LDO49_RS31620;partial=true;product=cytochrome P450;protein_id=WP_224052716.1;transl_table=11 ##sequence-region NZ_CAJZAV010000277.1 1 79675 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000277.1 RefSeq region 1 79675 . + . ID=NZ_CAJZAV010000277.1:1..79675;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_68 NZ_CAJZAV010000277.1 RefSeq gene 27 395 . - . ID=gene-LDO49_RS31625;Name=LDO49_RS31625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31625;old_locus_tag=BCEP4_680001 NZ_CAJZAV010000277.1 Protein Homology CDS 27 395 . - 0 ID=cds-WP_042975499.1;Parent=gene-LDO49_RS31625;Dbxref=GenBank:WP_042975499.1;Name=WP_042975499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896126.1;locus_tag=LDO49_RS31625;product=hypothetical protein;protein_id=WP_042975499.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 558 2081 . + . ID=gene-LDO49_RS31630;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=LDO49_RS31630;old_locus_tag=BCEP4_680003 NZ_CAJZAV010000277.1 Protein Homology CDS 558 2081 . + 0 ID=cds-WP_060069805.1;Parent=gene-LDO49_RS31630;Dbxref=GenBank:WP_060069805.1;Name=WP_060069805.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546146.1;locus_tag=LDO49_RS31630;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_060069805.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 2188 3690 . + . ID=gene-LDO49_RS31635;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=LDO49_RS31635;old_locus_tag=BCEP4_680004 NZ_CAJZAV010000277.1 Protein Homology CDS 2188 3690 . + 0 ID=cds-WP_021160163.1;Parent=gene-LDO49_RS31635;Dbxref=GenBank:WP_021160163.1;Name=WP_021160163.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896124.1;locus_tag=LDO49_RS31635;product=glycerol kinase GlpK;protein_id=WP_021160163.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 3773 4489 . + . ID=gene-LDO49_RS31640;Name=LDO49_RS31640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31640;old_locus_tag=BCEP4_680005 NZ_CAJZAV010000277.1 Protein Homology CDS 3773 4489 . + 0 ID=cds-WP_021160162.1;Parent=gene-LDO49_RS31640;Dbxref=GenBank:WP_021160162.1;Name=WP_021160162.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757965.1;locus_tag=LDO49_RS31640;product=MIP/aquaporin family protein;protein_id=WP_021160162.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 4543 4677 . - . ID=gene-LDO49_RS31645;Name=LDO49_RS31645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31645 NZ_CAJZAV010000277.1 GeneMarkS-2+ CDS 4543 4677 . - 0 ID=cds-WP_372585884.1;Parent=gene-LDO49_RS31645;Dbxref=GenBank:WP_372585884.1;Name=WP_372585884.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS31645;product=hypothetical protein;protein_id=WP_372585884.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 4874 5560 . + . ID=gene-LDO49_RS31650;Name=LDO49_RS31650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31650;old_locus_tag=BCEP4_680006 NZ_CAJZAV010000277.1 Protein Homology CDS 4874 5560 . + 0 ID=cds-WP_048025979.1;Parent=gene-LDO49_RS31650;Dbxref=GenBank:WP_048025979.1;Name=WP_048025979.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526142.1;locus_tag=LDO49_RS31650;product=HAD family hydrolase;protein_id=WP_048025979.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 5667 6377 . - . ID=gene-LDO49_RS31655;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=LDO49_RS31655;old_locus_tag=BCEP4_680007 NZ_CAJZAV010000277.1 Protein Homology CDS 5667 6377 . - 0 ID=cds-WP_027789183.1;Parent=gene-LDO49_RS31655;Dbxref=GenBank:WP_027789183.1;Name=WP_027789183.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489272.1;locus_tag=LDO49_RS31655;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_027789183.1;transl_table=11 NZ_CAJZAV010000277.1 cmsearch riboswitch 6496 6644 . - . ID=id-NZ_CAJZAV010000277.1:6496..6644;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAV010000277.1 RefSeq gene 6833 7525 . - . ID=gene-LDO49_RS31660;Name=LDO49_RS31660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31660;old_locus_tag=BCEP4_680008 NZ_CAJZAV010000277.1 Protein Homology CDS 6833 7525 . - 0 ID=cds-WP_021160158.1;Parent=gene-LDO49_RS31660;Dbxref=GenBank:WP_021160158.1;Name=WP_021160158.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885957.1;locus_tag=LDO49_RS31660;product=helix-turn-helix domain-containing protein;protein_id=WP_021160158.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 7736 8911 . - . ID=gene-LDO49_RS31665;Name=LDO49_RS31665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31665;old_locus_tag=BCEP4_680009 NZ_CAJZAV010000277.1 Protein Homology CDS 7736 8911 . - 0 ID=cds-WP_059815588.1;Parent=gene-LDO49_RS31665;Dbxref=GenBank:WP_059815588.1;Name=WP_059815588.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009918767.1;locus_tag=LDO49_RS31665;product=MFS transporter;protein_id=WP_059815588.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 9056 9988 . + . ID=gene-LDO49_RS31670;Name=LDO49_RS31670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31670;old_locus_tag=BCEP4_680010 NZ_CAJZAV010000277.1 Protein Homology CDS 9056 9988 . + 0 ID=cds-WP_224052717.1;Parent=gene-LDO49_RS31670;Dbxref=GenBank:WP_224052717.1;Name=WP_224052717.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364658.1;locus_tag=LDO49_RS31670;product=LysR family transcriptional regulator;protein_id=WP_224052717.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 10207 11580 . + . ID=gene-LDO49_RS31675;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=LDO49_RS31675;old_locus_tag=BCEP4_680011 NZ_CAJZAV010000277.1 Protein Homology CDS 10207 11580 . + 0 ID=cds-WP_059552869.1;Parent=gene-LDO49_RS31675;Dbxref=GenBank:WP_059552869.1;Name=WP_059552869.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896118.1;locus_tag=LDO49_RS31675;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_059552869.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 11606 12652 . + . ID=gene-LDO49_RS31680;Name=LDO49_RS31680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31680;old_locus_tag=BCEP4_680012 NZ_CAJZAV010000277.1 Protein Homology CDS 11606 12652 . + 0 ID=cds-WP_060069808.1;Parent=gene-LDO49_RS31680;Dbxref=GenBank:WP_060069808.1;Name=WP_060069808.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477874.1;locus_tag=LDO49_RS31680;product=PhoH family protein;protein_id=WP_060069808.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 12799 13575 . + . ID=gene-LDO49_RS31685;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=LDO49_RS31685;old_locus_tag=BCEP4_680013 NZ_CAJZAV010000277.1 Protein Homology CDS 12799 13575 . + 0 ID=cds-WP_059708193.1;Parent=gene-LDO49_RS31685;Dbxref=GenBank:WP_059708193.1;Name=WP_059708193.1;gbkey=CDS;gene=ybeY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530902.1;locus_tag=LDO49_RS31685;product=rRNA maturation RNase YbeY;protein_id=WP_059708193.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 13588 14220 . + . ID=gene-LDO49_RS31690;Name=LDO49_RS31690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31690;old_locus_tag=BCEP4_680014 NZ_CAJZAV010000277.1 Protein Homology CDS 13588 14220 . + 0 ID=cds-WP_060069810.1;Parent=gene-LDO49_RS31690;Dbxref=GenBank:WP_060069810.1;Name=WP_060069810.1;Ontology_term=GO:0006751,GO:0061928;gbkey=CDS;go_function=glutathione specific gamma-glutamylcyclotransferase activity|0061928||IEA;go_process=glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486595.1;locus_tag=LDO49_RS31690;product=gamma-glutamylcyclotransferase;protein_id=WP_060069810.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 14291 14440 . + . ID=gene-LDO49_RS31695;Name=LDO49_RS31695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31695 NZ_CAJZAV010000277.1 Protein Homology CDS 14291 14440 . + 0 ID=cds-WP_021160151.1;Parent=gene-LDO49_RS31695;Dbxref=GenBank:WP_021160151.1;Name=WP_021160151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497373.1;locus_tag=LDO49_RS31695;product=hypothetical protein;protein_id=WP_021160151.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 14746 15633 . + . ID=gene-LDO49_RS31700;Name=LDO49_RS31700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31700;old_locus_tag=BCEP4_680016 NZ_CAJZAV010000277.1 Protein Homology CDS 14746 15633 . + 0 ID=cds-WP_021160150.1;Parent=gene-LDO49_RS31700;Dbxref=GenBank:WP_021160150.1;Name=WP_021160150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024598.1;locus_tag=LDO49_RS31700;product=HlyC/CorC family transporter;protein_id=WP_021160150.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 15686 17374 . + . ID=gene-LDO49_RS31705;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=LDO49_RS31705;old_locus_tag=BCEP4_680017 NZ_CAJZAV010000277.1 Protein Homology CDS 15686 17374 . + 0 ID=cds-WP_060069812.1;Parent=gene-LDO49_RS31705;Dbxref=GenBank:WP_060069812.1;Name=WP_060069812.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353132.1;locus_tag=LDO49_RS31705;product=apolipoprotein N-acyltransferase;protein_id=WP_060069812.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 17453 19108 . - . ID=gene-LDO49_RS31710;Name=LDO49_RS31710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31710;old_locus_tag=BCEP4_680018 NZ_CAJZAV010000277.1 Protein Homology CDS 17453 19108 . - 0 ID=cds-WP_060069814.1;Parent=gene-LDO49_RS31710;Dbxref=GenBank:WP_060069814.1;Name=WP_060069814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329196.1;locus_tag=LDO49_RS31710;product=tetratricopeptide repeat protein;protein_id=WP_060069814.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 19430 20434 . + . ID=gene-LDO49_RS31715;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=LDO49_RS31715;old_locus_tag=BCEP4_680019 NZ_CAJZAV010000277.1 Protein Homology CDS 19430 20434 . + 0 ID=cds-WP_011885965.1;Parent=gene-LDO49_RS31715;Dbxref=GenBank:WP_011885965.1;Name=WP_011885965.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896110.1;locus_tag=LDO49_RS31715;product=glycine--tRNA ligase subunit alpha;protein_id=WP_011885965.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 20457 22556 . + . ID=gene-LDO49_RS31720;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=LDO49_RS31720;old_locus_tag=BCEP4_680020 NZ_CAJZAV010000277.1 Protein Homology CDS 20457 22556 . + 0 ID=cds-WP_060069816.1;Parent=gene-LDO49_RS31720;Dbxref=GenBank:WP_060069816.1;Name=WP_060069816.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009963525.1;locus_tag=LDO49_RS31720;product=glycine--tRNA ligase subunit beta;protein_id=WP_060069816.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 22567 23130 . + . ID=gene-LDO49_RS31725;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=LDO49_RS31725;old_locus_tag=BCEP4_680021 NZ_CAJZAV010000277.1 Protein Homology CDS 22567 23130 . + 0 ID=cds-WP_042976157.1;Parent=gene-LDO49_RS31725;Dbxref=GenBank:WP_042976157.1;Name=WP_042976157.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101763.1;locus_tag=LDO49_RS31725;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_042976157.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 23174 23938 . + . ID=gene-LDO49_RS31730;Name=LDO49_RS31730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31730;old_locus_tag=BCEP4_680022 NZ_CAJZAV010000277.1 Protein Homology CDS 23174 23938 . + 0 ID=cds-WP_021161198.1;Parent=gene-LDO49_RS31730;Dbxref=GenBank:WP_021161198.1;Name=WP_021161198.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398329.1;locus_tag=LDO49_RS31730;product=lysophospholipid acyltransferase family protein;protein_id=WP_021161198.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 23985 24872 . + . ID=gene-LDO49_RS31735;Name=LDO49_RS31735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31735;old_locus_tag=BCEP4_680023 NZ_CAJZAV010000277.1 Protein Homology CDS 23985 24872 . + 0 ID=cds-WP_027789172.1;Parent=gene-LDO49_RS31735;Dbxref=GenBank:WP_027789172.1;Name=WP_027789172.1;Ontology_term=GO:0006508,GO:0008233,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=peptidase activity|0008233||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398328.1;locus_tag=LDO49_RS31735;product=M48 family metallopeptidase;protein_id=WP_027789172.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 24978 25367 . - . ID=gene-LDO49_RS31740;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=LDO49_RS31740;old_locus_tag=BCEP4_680024 NZ_CAJZAV010000277.1 Protein Homology CDS 24978 25367 . - 0 ID=cds-WP_021161200.1;Parent=gene-LDO49_RS31740;Dbxref=GenBank:WP_021161200.1;Name=WP_021161200.1;Ontology_term=GO:0051596,GO:0004462,GO:0046872;gbkey=CDS;gene=gloA;go_function=lactoylglutathione lyase activity|0004462||IEA,metal ion binding|0046872||IEA;go_process=methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189937.1;locus_tag=LDO49_RS31740;product=lactoylglutathione lyase;protein_id=WP_021161200.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 25705 26646 . + . ID=gene-LDO49_RS31745;Name=LDO49_RS31745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31745;old_locus_tag=BCEP4_680025 NZ_CAJZAV010000277.1 Protein Homology CDS 25705 26646 . + 0 ID=cds-WP_060069818.1;Parent=gene-LDO49_RS31745;Dbxref=GenBank:WP_060069818.1;Name=WP_060069818.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491616.1;locus_tag=LDO49_RS31745;product=DMT family transporter;protein_id=WP_060069818.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 26771 27601 . - . ID=gene-LDO49_RS31750;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=LDO49_RS31750;old_locus_tag=BCEP4_680026 NZ_CAJZAV010000277.1 Protein Homology CDS 26771 27601 . - 0 ID=cds-WP_060069820.1;Parent=gene-LDO49_RS31750;Dbxref=GenBank:WP_060069820.1;Name=WP_060069820.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896103.1;locus_tag=LDO49_RS31750;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_060069820.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 27651 28640 . - . ID=gene-LDO49_RS31755;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=LDO49_RS31755;old_locus_tag=BCEP4_680027 NZ_CAJZAV010000277.1 Protein Homology CDS 27651 28640 . - 0 ID=cds-WP_021161203.1;Parent=gene-LDO49_RS31755;Dbxref=GenBank:WP_021161203.1;Name=WP_021161203.1;Ontology_term=GO:0042823,GO:0050570,GO:0051287;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885973.1;locus_tag=LDO49_RS31755;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_021161203.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 28652 30010 . - . ID=gene-LDO49_RS31760;Name=LDO49_RS31760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31760;old_locus_tag=BCEP4_680028 NZ_CAJZAV010000277.1 Protein Homology CDS 28652 30010 . - 0 ID=cds-WP_027789167.1;Parent=gene-LDO49_RS31760;Dbxref=GenBank:WP_027789167.1;Name=WP_027789167.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757836.1;locus_tag=LDO49_RS31760;product=peptidylprolyl isomerase;protein_id=WP_027789167.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 30062 32422 . - . ID=gene-LDO49_RS31765;Name=LDO49_RS31765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31765;old_locus_tag=BCEP4_680029 NZ_CAJZAV010000277.1 Protein Homology CDS 30062 32422 . - 0 ID=cds-WP_021161205.1;Parent=gene-LDO49_RS31765;Dbxref=GenBank:WP_021161205.1;Name=WP_021161205.1;Ontology_term=GO:0015920;gbkey=CDS;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546173.1;locus_tag=LDO49_RS31765;product=LPS-assembly protein LptD;protein_id=WP_021161205.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 32645 33694 . + . ID=gene-LDO49_RS31770;Name=LDO49_RS31770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31770;old_locus_tag=BCEP4_680030 NZ_CAJZAV010000277.1 Protein Homology CDS 32645 33694 . + 0 ID=cds-WP_059485377.1;Parent=gene-LDO49_RS31770;Dbxref=GenBank:WP_059485377.1;Name=WP_059485377.1;Ontology_term=GO:0016310,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010114048.1;locus_tag=LDO49_RS31770;product=aminoglycoside phosphotransferase family protein;protein_id=WP_059485377.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 33726 34445 . + . ID=gene-LDO49_RS31775;Name=murU;gbkey=Gene;gene=murU;gene_biotype=protein_coding;locus_tag=LDO49_RS31775;old_locus_tag=BCEP4_680031 NZ_CAJZAV010000277.1 Protein Homology CDS 33726 34445 . + 0 ID=cds-WP_059485376.1;Parent=gene-LDO49_RS31775;Dbxref=GenBank:WP_059485376.1;Name=WP_059485376.1;Ontology_term=GO:0009252,GO:0016779;gbkey=CDS;gene=murU;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723609.1;locus_tag=LDO49_RS31775;product=N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU;protein_id=WP_059485376.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 34750 36621 . - . ID=gene-LDO49_RS31780;Name=LDO49_RS31780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31780;old_locus_tag=BCEP4_680032 NZ_CAJZAV010000277.1 Protein Homology CDS 34750 36621 . - 0 ID=cds-WP_060069823.1;Parent=gene-LDO49_RS31780;Dbxref=GenBank:WP_060069823.1;Name=WP_060069823.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896097.1;locus_tag=LDO49_RS31780;product=ABCB family ABC transporter ATP-binding protein/permease;protein_id=WP_060069823.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 36796 37191 . + . ID=gene-LDO49_RS31785;Name=LDO49_RS31785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31785;old_locus_tag=BCEP4_680033 NZ_CAJZAV010000277.1 Protein Homology CDS 36796 37191 . + 0 ID=cds-WP_027789162.1;Parent=gene-LDO49_RS31785;Dbxref=GenBank:WP_027789162.1;Name=WP_027789162.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723611.1;locus_tag=LDO49_RS31785;product=acyl-CoA thioesterase;protein_id=WP_027789162.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 37228 37710 . - . ID=gene-LDO49_RS31790;Name=LDO49_RS31790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31790;old_locus_tag=BCEP4_680034 NZ_CAJZAV010000277.1 Protein Homology CDS 37228 37710 . - 0 ID=cds-WP_021158425.1;Parent=gene-LDO49_RS31790;Dbxref=GenBank:WP_021158425.1;Name=WP_021158425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406561.1;locus_tag=LDO49_RS31790;product=nitrate reductase associated protein;protein_id=WP_021158425.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 37826 38668 . + . ID=gene-LDO49_RS31795;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=LDO49_RS31795;old_locus_tag=BCEP4_680035 NZ_CAJZAV010000277.1 Protein Homology CDS 37826 38668 . + 0 ID=cds-WP_372585885.1;Parent=gene-LDO49_RS31795;Dbxref=GenBank:WP_372585885.1;Name=WP_372585885.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415971.1;locus_tag=LDO49_RS31795;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_372585885.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 38720 39487 . - . ID=gene-LDO49_RS31800;Name=LDO49_RS31800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31800;old_locus_tag=BCEP4_680036 NZ_CAJZAV010000277.1 Protein Homology CDS 38720 39487 . - 0 ID=cds-WP_021158423.1;Parent=gene-LDO49_RS31800;Dbxref=GenBank:WP_021158423.1;Name=WP_021158423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406562.1;locus_tag=LDO49_RS31800;product=enoyl-CoA hydratase;protein_id=WP_021158423.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 39579 40778 . - . ID=gene-LDO49_RS31805;Name=LDO49_RS31805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31805;old_locus_tag=BCEP4_680037 NZ_CAJZAV010000277.1 Protein Homology CDS 39579 40778 . - 0 ID=cds-WP_048026145.1;Parent=gene-LDO49_RS31805;Dbxref=GenBank:WP_048026145.1;Name=WP_048026145.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353151.1;locus_tag=LDO49_RS31805;product=acetyl-CoA C-acyltransferase;protein_id=WP_048026145.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 40805 43240 . - . ID=gene-LDO49_RS31810;Name=LDO49_RS31810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31810;old_locus_tag=BCEP4_680038 NZ_CAJZAV010000277.1 Protein Homology CDS 40805 43240 . - 0 ID=cds-WP_021158421.1;Parent=gene-LDO49_RS31810;Dbxref=GenBank:WP_021158421.1;Name=WP_021158421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004537876.1;locus_tag=LDO49_RS31810;product=3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein;protein_id=WP_021158421.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 43353 45140 . - . ID=gene-LDO49_RS31815;Name=LDO49_RS31815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31815;old_locus_tag=BCEP4_680039 NZ_CAJZAV010000277.1 Protein Homology CDS 43353 45140 . - 0 ID=cds-WP_021158420.1;Parent=gene-LDO49_RS31815;Dbxref=GenBank:WP_021158420.1;Name=WP_021158420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017772699.1;locus_tag=LDO49_RS31815;product=acyl-CoA dehydrogenase C-terminal domain-containing protein;protein_id=WP_021158420.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 45199 45798 . - . ID=gene-LDO49_RS31820;Name=LDO49_RS31820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31820;old_locus_tag=BCEP4_680040 NZ_CAJZAV010000277.1 Protein Homology CDS 45199 45798 . - 0 ID=cds-WP_006751498.1;Parent=gene-LDO49_RS31820;Dbxref=GenBank:WP_006751498.1;Name=WP_006751498.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006047961.1;locus_tag=LDO49_RS31820;product=TetR/AcrR family transcriptional regulator;protein_id=WP_006751498.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 45998 47272 . - . ID=gene-LDO49_RS31825;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=LDO49_RS31825;old_locus_tag=BCEP4_680041 NZ_CAJZAV010000277.1 Protein Homology CDS 45998 47272 . - 0 ID=cds-WP_060069825.1;Parent=gene-LDO49_RS31825;Dbxref=GenBank:WP_060069825.1;Name=WP_060069825.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189031.1;locus_tag=LDO49_RS31825;product=cardiolipin synthase ClsB;protein_id=WP_060069825.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 47269 47763 . - . ID=gene-LDO49_RS31830;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=LDO49_RS31830;old_locus_tag=BCEP4_680042 NZ_CAJZAV010000277.1 Protein Homology CDS 47269 47763 . - 0 ID=cds-WP_021158417.1;Parent=gene-LDO49_RS31830;Dbxref=GenBank:WP_021158417.1;Name=WP_021158417.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364686.1;locus_tag=LDO49_RS31830;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_021158417.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 47923 49725 . - . ID=gene-LDO49_RS31835;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=LDO49_RS31835;old_locus_tag=BCEP4_680043 NZ_CAJZAV010000277.1 Protein Homology CDS 47923 49725 . - 0 ID=cds-WP_021158416.1;Parent=gene-LDO49_RS31835;Dbxref=GenBank:WP_021158416.1;Name=WP_021158416.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024571.1;locus_tag=LDO49_RS31835;product=aspartate--tRNA ligase;protein_id=WP_021158416.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 49793 50443 . - . ID=gene-LDO49_RS31840;Name=LDO49_RS31840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31840;old_locus_tag=BCEP4_680044 NZ_CAJZAV010000277.1 Protein Homology CDS 49793 50443 . - 0 ID=cds-WP_021158415.1;Parent=gene-LDO49_RS31840;Dbxref=GenBank:WP_021158415.1;Name=WP_021158415.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024570.1;locus_tag=LDO49_RS31840;product=DUF502 domain-containing protein;protein_id=WP_021158415.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 50505 50852 . - . ID=gene-LDO49_RS31845;Name=LDO49_RS31845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31845;old_locus_tag=BCEP4_680045 NZ_CAJZAV010000277.1 Protein Homology CDS 50505 50852 . - 0 ID=cds-WP_027789154.1;Parent=gene-LDO49_RS31845;Dbxref=GenBank:WP_027789154.1;Name=WP_027789154.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555565.1;locus_tag=LDO49_RS31845;product=FmdB family zinc ribbon protein;protein_id=WP_027789154.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 50948 51574 . - . ID=gene-LDO49_RS31850;Name=LDO49_RS31850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31850;old_locus_tag=BCEP4_680046 NZ_CAJZAV010000277.1 Protein Homology CDS 50948 51574 . - 0 ID=cds-WP_021161318.1;Parent=gene-LDO49_RS31850;Dbxref=GenBank:WP_021161318.1;Name=WP_021161318.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751503.1;locus_tag=LDO49_RS31850;product=methyltransferase domain-containing protein;protein_id=WP_021161318.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 51592 53169 . - . ID=gene-LDO49_RS31855;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=LDO49_RS31855;old_locus_tag=BCEP4_680047 NZ_CAJZAV010000277.1 Protein Homology CDS 51592 53169 . - 0 ID=cds-WP_048026149.1;Parent=gene-LDO49_RS31855;Dbxref=GenBank:WP_048026149.1;Name=WP_048026149.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069627.1;locus_tag=LDO49_RS31855;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_048026149.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 53182 53808 . - . ID=gene-LDO49_RS31860;Name=LDO49_RS31860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31860;old_locus_tag=BCEP4_680048 NZ_CAJZAV010000277.1 Protein Homology CDS 53182 53808 . - 0 ID=cds-WP_060069827.1;Parent=gene-LDO49_RS31860;Dbxref=GenBank:WP_060069827.1;Name=WP_060069827.1;Ontology_term=GO:0006744,GO:0008289,GO:0110142;gbkey=CDS;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_function=lipid binding|0008289||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761590.1;locus_tag=LDO49_RS31860;product=ubiquinone biosynthesis accessory factor UbiJ;protein_id=WP_060069827.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 53972 55003 . - . ID=gene-LDO49_RS31865;Name=LDO49_RS31865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31865;old_locus_tag=BCEP4_680050 NZ_CAJZAV010000277.1 Protein Homology CDS 53972 55003 . - 0 ID=cds-WP_021161321.1;Parent=gene-LDO49_RS31865;Dbxref=GenBank:WP_021161321.1;Name=WP_021161321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546188.1;locus_tag=LDO49_RS31865;product=Tim44 domain-containing protein;protein_id=WP_021161321.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 55045 55776 . - . ID=gene-LDO49_RS31870;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=LDO49_RS31870;old_locus_tag=BCEP4_680051 NZ_CAJZAV010000277.1 Protein Homology CDS 55045 55776 . - 0 ID=cds-WP_027789150.1;Parent=gene-LDO49_RS31870;Dbxref=GenBank:WP_027789150.1;Name=WP_027789150.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546189.1;locus_tag=LDO49_RS31870;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_027789150.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 55830 56243 . - . ID=gene-LDO49_RS31875;Name=LDO49_RS31875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31875;old_locus_tag=BCEP4_680052 NZ_CAJZAV010000277.1 Protein Homology CDS 55830 56243 . - 0 ID=cds-WP_059495437.1;Parent=gene-LDO49_RS31875;Dbxref=GenBank:WP_059495437.1;Name=WP_059495437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487879.1;locus_tag=LDO49_RS31875;product=gamma-butyrobetaine hydroxylase-like domain-containing protein;protein_id=WP_059495437.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 56240 56683 . - . ID=gene-LDO49_RS31880;Name=LDO49_RS31880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31880;old_locus_tag=BCEP4_680053 NZ_CAJZAV010000277.1 Protein Homology CDS 56240 56683 . - 0 ID=cds-WP_021161324.1;Parent=gene-LDO49_RS31880;Dbxref=GenBank:WP_021161324.1;Name=WP_021161324.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657904.1;locus_tag=LDO49_RS31880;product=HIT family protein;protein_id=WP_021161324.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 56769 60794 . - . ID=gene-LDO49_RS31885;Name=LDO49_RS31885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31885;old_locus_tag=BCEP4_680054 NZ_CAJZAV010000277.1 Protein Homology CDS 56769 60794 . - 0 ID=cds-WP_059589715.1;Parent=gene-LDO49_RS31885;Dbxref=GenBank:WP_059589715.1;Name=WP_059589715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543744.1;locus_tag=LDO49_RS31885;product=DUF3683 domain-containing protein;protein_id=WP_059589715.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 61371 62894 . + . ID=gene-LDO49_RS31890;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=LDO49_RS31890;old_locus_tag=BCEP4_680055 NZ_CAJZAV010000277.1 Protein Homology CDS 61371 62894 . + 0 ID=cds-WP_021161327.1;Parent=gene-LDO49_RS31890;Dbxref=GenBank:WP_021161327.1;Name=WP_021161327.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334189.1;locus_tag=LDO49_RS31890;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_021161327.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 62906 63730 . + . ID=gene-LDO49_RS31895;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=LDO49_RS31895;old_locus_tag=BCEP4_680057 NZ_CAJZAV010000277.1 Protein Homology CDS 62906 63730 . + 0 ID=cds-WP_027789146.1;Parent=gene-LDO49_RS31895;Dbxref=GenBank:WP_027789146.1;Name=WP_027789146.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886006.1;locus_tag=LDO49_RS31895;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_027789146.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq pseudogene 63909 64094 . - . ID=gene-LDO49_RS31900;Name=LDO49_RS31900;end_range=64094,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS31900;old_locus_tag=BCEP4_680058;partial=true;pseudo=true NZ_CAJZAV010000277.1 Protein Homology CDS 63909 64094 . - 0 ID=cds-LDO49_RS31900;Parent=gene-LDO49_RS31900;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=64094,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751946.1;locus_tag=LDO49_RS31900;partial=true;product=RidA family protein;pseudo=true;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 64187 64540 . - . ID=gene-LDO49_RS31905;Name=LDO49_RS31905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31905;old_locus_tag=BCEP4_680060 NZ_CAJZAV010000277.1 Protein Homology CDS 64187 64540 . - 0 ID=cds-WP_059589713.1;Parent=gene-LDO49_RS31905;Dbxref=GenBank:WP_059589713.1;Name=WP_059589713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759684.1;locus_tag=LDO49_RS31905;product=DUF1493 family protein;protein_id=WP_059589713.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 64540 64974 . - . ID=gene-LDO49_RS31910;Name=LDO49_RS31910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31910;old_locus_tag=BCEP4_680061 NZ_CAJZAV010000277.1 Protein Homology CDS 64540 64974 . - 0 ID=cds-WP_059708177.1;Parent=gene-LDO49_RS31910;Dbxref=GenBank:WP_059708177.1;Name=WP_059708177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_113047613.1;locus_tag=LDO49_RS31910;product=STM2901 family protein;protein_id=WP_059708177.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 65328 65714 . - . ID=gene-LDO49_RS31915;Name=LDO49_RS31915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31915;old_locus_tag=BCEP4_680064 NZ_CAJZAV010000277.1 Protein Homology CDS 65328 65714 . - 0 ID=cds-WP_006751946.1;Parent=gene-LDO49_RS31915;Dbxref=GenBank:WP_006751946.1;Name=WP_006751946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751946.1;locus_tag=LDO49_RS31915;product=RidA family protein;protein_id=WP_006751946.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 65839 67320 . - . ID=gene-LDO49_RS31920;Name=LDO49_RS31920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31920;old_locus_tag=BCEP4_680065 NZ_CAJZAV010000277.1 Protein Homology CDS 65839 67320 . - 0 ID=cds-WP_059708175.1;Parent=gene-LDO49_RS31920;Dbxref=GenBank:WP_059708175.1;Name=WP_059708175.1;Ontology_term=GO:0047420;gbkey=CDS;go_function=N-acyl-D-amino-acid deacylase activity|0047420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353172.1;locus_tag=LDO49_RS31920;product=N-acyl-D-amino-acid deacylase family protein;protein_id=WP_059708175.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 67323 68261 . - . ID=gene-LDO49_RS31925;Name=LDO49_RS31925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31925;old_locus_tag=BCEP4_680066 NZ_CAJZAV010000277.1 Protein Homology CDS 67323 68261 . - 0 ID=cds-WP_060069831.1;Parent=gene-LDO49_RS31925;Dbxref=GenBank:WP_060069831.1;Name=WP_060069831.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477828.1;locus_tag=LDO49_RS31925;product=MurR/RpiR family transcriptional regulator;protein_id=WP_060069831.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 68381 69661 . + . ID=gene-LDO49_RS31930;Name=LDO49_RS31930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31930;old_locus_tag=BCEP4_680067 NZ_CAJZAV010000277.1 Protein Homology CDS 68381 69661 . + 0 ID=cds-WP_048023194.1;Parent=gene-LDO49_RS31930;Dbxref=GenBank:WP_048023194.1;Name=WP_048023194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009902905.1;locus_tag=LDO49_RS31930;product=amino acid deaminase;protein_id=WP_048023194.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 69817 70398 . + . ID=gene-LDO49_RS31935;Name=LDO49_RS31935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31935;old_locus_tag=BCEP4_680068 NZ_CAJZAV010000277.1 Protein Homology CDS 69817 70398 . + 0 ID=cds-WP_021161332.1;Parent=gene-LDO49_RS31935;Dbxref=GenBank:WP_021161332.1;Name=WP_021161332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024552.1;locus_tag=LDO49_RS31935;product=DJ-1/PfpI family protein;protein_id=WP_021161332.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 70480 70926 . - . ID=gene-LDO49_RS31940;Name=LDO49_RS31940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31940;old_locus_tag=BCEP4_680069 NZ_CAJZAV010000277.1 Protein Homology CDS 70480 70926 . - 0 ID=cds-WP_021161333.1;Parent=gene-LDO49_RS31940;Dbxref=GenBank:WP_021161333.1;Name=WP_021161333.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406580.1;locus_tag=LDO49_RS31940;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_021161333.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 70953 72548 . - . ID=gene-LDO49_RS31945;Name=LDO49_RS31945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31945;old_locus_tag=BCEP4_680070 NZ_CAJZAV010000277.1 Protein Homology CDS 70953 72548 . - 0 ID=cds-WP_021161334.1;Parent=gene-LDO49_RS31945;Dbxref=GenBank:WP_021161334.1;Name=WP_021161334.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406581.1;locus_tag=LDO49_RS31945;product=MDR family MFS transporter;protein_id=WP_021161334.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 72656 73498 . + . ID=gene-LDO49_RS31950;Name=LDO49_RS31950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31950;old_locus_tag=BCEP4_680071 NZ_CAJZAV010000277.1 Protein Homology CDS 72656 73498 . + 0 ID=cds-WP_021161335.1;Parent=gene-LDO49_RS31950;Dbxref=GenBank:WP_021161335.1;Name=WP_021161335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555278.1;locus_tag=LDO49_RS31950;product=EcsC family protein;protein_id=WP_021161335.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 73468 74430 . - . ID=gene-LDO49_RS31955;Name=LDO49_RS31955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31955;old_locus_tag=BCEP4_680072 NZ_CAJZAV010000277.1 Protein Homology CDS 73468 74430 . - 0 ID=cds-WP_059589707.1;Parent=gene-LDO49_RS31955;Dbxref=GenBank:WP_059589707.1;Name=WP_059589707.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004541011.1;locus_tag=LDO49_RS31955;product=alpha/beta hydrolase;protein_id=WP_059589707.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 74520 74954 . - . ID=gene-LDO49_RS31960;Name=LDO49_RS31960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31960;old_locus_tag=BCEP4_680073 NZ_CAJZAV010000277.1 Protein Homology CDS 74520 74954 . - 0 ID=cds-WP_021161337.1;Parent=gene-LDO49_RS31960;Dbxref=GenBank:WP_021161337.1;Name=WP_021161337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011204847.1;locus_tag=LDO49_RS31960;product=CHRD domain-containing protein;protein_id=WP_021161337.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 75293 76066 . - . ID=gene-LDO49_RS31965;Name=LDO49_RS31965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31965;old_locus_tag=BCEP4_680075 NZ_CAJZAV010000277.1 Protein Homology CDS 75293 76066 . - 0 ID=cds-WP_021161338.1;Parent=gene-LDO49_RS31965;Dbxref=GenBank:WP_021161338.1;Name=WP_021161338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353182.1;locus_tag=LDO49_RS31965;product=class II aldolase/adducin family protein;protein_id=WP_021161338.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 76215 77837 . - . ID=gene-LDO49_RS31970;Name=LDO49_RS31970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31970;old_locus_tag=BCEP4_680076 NZ_CAJZAV010000277.1 Protein Homology CDS 76215 77837 . - 0 ID=cds-WP_060069833.1;Parent=gene-LDO49_RS31970;Dbxref=GenBank:WP_060069833.1;Name=WP_060069833.1;Ontology_term=GO:0032049,GO:0090483;gbkey=CDS;go_function=phosphatidylglycerol-phosphatidylethanolamine phosphatidyltransferase activity|0090483||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497399.1;locus_tag=LDO49_RS31970;product=phospholipase D family protein;protein_id=WP_060069833.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 78061 78777 . - . ID=gene-LDO49_RS31975;Name=LDO49_RS31975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31975;old_locus_tag=BCEP4_680078 NZ_CAJZAV010000277.1 Protein Homology CDS 78061 78777 . - 0 ID=cds-WP_027789137.1;Parent=gene-LDO49_RS31975;Dbxref=GenBank:WP_027789137.1;Name=WP_027789137.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353184.1;locus_tag=LDO49_RS31975;product=FadR/GntR family transcriptional regulator;protein_id=WP_027789137.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq gene 78912 79485 . + . ID=gene-LDO49_RS31980;Name=LDO49_RS31980;end_range=79485,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31980;old_locus_tag=BCEP4_680079;partial=true NZ_CAJZAV010000277.1 Protein Homology CDS 78912 79485 . + 0 ID=cds-WP_443798018.1;Parent=gene-LDO49_RS31980;Dbxref=GenBank:WP_443798018.1;Name=WP_443798018.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;end_range=79485,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762757.1;locus_tag=LDO49_RS31980;partial=true;product=(Fe-S)-binding protein;protein_id=WP_443798018.1;transl_table=11 NZ_CAJZAV010000277.1 RefSeq pseudogene 79496 79663 . + . ID=gene-LDO49_RS38370;Name=LDO49_RS38370;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38370;old_locus_tag=BCEP4_680080;partial=true;pseudo=true;start_range=.,79496 NZ_CAJZAV010000277.1 Protein Homology CDS 79496 79663 . + 0 ID=cds-LDO49_RS38370;Parent=gene-LDO49_RS38370;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762757.1;locus_tag=LDO49_RS38370;partial=true;product=(Fe-S)-binding protein;pseudo=true;start_range=.,79496;transl_table=11 ##sequence-region NZ_CAJZAV010000278.1 1 27147 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000278.1 RefSeq region 1 27147 . + . ID=NZ_CAJZAV010000278.1:1..27147;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_69 NZ_CAJZAV010000278.1 RefSeq gene 203 318 . + . ID=gene-LDO49_RS31985;Name=LDO49_RS31985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31985;partial=true;start_range=.,203 NZ_CAJZAV010000278.1 Protein Homology CDS 203 318 . + 2 ID=cds-WP_224052719.1;Parent=gene-LDO49_RS31985;Dbxref=GenBank:WP_224052719.1;Name=WP_224052719.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481008.1;locus_tag=LDO49_RS31985;partial=true;product=DUF1656 domain-containing protein;protein_id=WP_224052719.1;start_range=.,203;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 321 1298 . + . ID=gene-LDO49_RS31990;Name=LDO49_RS31990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31990;old_locus_tag=BCEP4_690001 NZ_CAJZAV010000278.1 Protein Homology CDS 321 1298 . + 0 ID=cds-WP_059814797.1;Parent=gene-LDO49_RS31990;Dbxref=GenBank:WP_059814797.1;Name=WP_059814797.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337147.1;locus_tag=LDO49_RS31990;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_059814797.1;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 1295 2824 . + . ID=gene-LDO49_RS31995;Name=LDO49_RS31995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS31995;old_locus_tag=BCEP4_690002 NZ_CAJZAV010000278.1 Protein Homology CDS 1295 2824 . + 0 ID=cds-WP_060147652.1;Parent=gene-LDO49_RS31995;Dbxref=GenBank:WP_060147652.1;Name=WP_060147652.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756534.1;locus_tag=LDO49_RS31995;product=efflux transporter outer membrane subunit;protein_id=WP_060147652.1;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 3093 3518 . + . ID=gene-LDO49_RS32000;Name=LDO49_RS32000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32000;old_locus_tag=BCEP4_690004 NZ_CAJZAV010000278.1 Protein Homology CDS 3093 3518 . + 0 ID=cds-WP_021163659.1;Parent=gene-LDO49_RS32000;Dbxref=GenBank:WP_021163659.1;Name=WP_021163659.1;Ontology_term=GO:0015689;gbkey=CDS;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337149.1;locus_tag=LDO49_RS32000;product=TOBE domain-containing protein;protein_id=WP_021163659.1;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 3618 4208 . + . ID=gene-LDO49_RS32005;Name=LDO49_RS32005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32005;old_locus_tag=BCEP4_690005 NZ_CAJZAV010000278.1 Protein Homology CDS 3618 4208 . + 0 ID=cds-WP_060147663.1;Parent=gene-LDO49_RS32005;Dbxref=GenBank:WP_060147663.1;Name=WP_060147663.1;Ontology_term=GO:0009399,GO:0030151;gbkey=CDS;go_function=molybdenum ion binding|0030151||IEA;go_process=nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497847.1;locus_tag=LDO49_RS32005;product=nitrogen fixation protein NifQ;protein_id=WP_060147663.1;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 4763 5824 . - . ID=gene-LDO49_RS32015;Name=LDO49_RS32015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32015;old_locus_tag=BCEP4_690007 NZ_CAJZAV010000278.1 Protein Homology CDS 4763 5824 . - 0 ID=cds-WP_060126009.1;Parent=gene-LDO49_RS32015;Dbxref=GenBank:WP_060126009.1;Name=WP_060126009.1;Ontology_term=GO:0055085,GO:0005215,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489069.1;locus_tag=LDO49_RS32015;product=DMT family transporter;protein_id=WP_060126009.1;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 6327 6989 . - . ID=gene-LDO49_RS32020;Name=LDO49_RS32020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32020;old_locus_tag=BCEP4_690009 NZ_CAJZAV010000278.1 Protein Homology CDS 6327 6989 . - 0 ID=cds-WP_021163663.1;Parent=gene-LDO49_RS32020;Dbxref=GenBank:WP_021163663.1;Name=WP_021163663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489074.1;locus_tag=LDO49_RS32020;product=ProQ/FinO family protein;protein_id=WP_021163663.1;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 7747 8331 . + . ID=gene-LDO49_RS32025;Name=LDO49_RS32025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32025;old_locus_tag=BCEP4_690010 NZ_CAJZAV010000278.1 Protein Homology CDS 7747 8331 . + 0 ID=cds-WP_021163665.1;Parent=gene-LDO49_RS32025;Dbxref=GenBank:WP_021163665.1;Name=WP_021163665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218456.1;locus_tag=LDO49_RS32025;product=DUF2889 domain-containing protein;protein_id=WP_021163665.1;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 8466 8957 . - . ID=gene-LDO49_RS32030;Name=LDO49_RS32030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32030;old_locus_tag=BCEP4_690011 NZ_CAJZAV010000278.1 Protein Homology CDS 8466 8957 . - 0 ID=cds-WP_060147651.1;Parent=gene-LDO49_RS32030;Dbxref=GenBank:WP_060147651.1;Name=WP_060147651.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335397.1;locus_tag=LDO49_RS32030;product=flavodoxin family protein;protein_id=WP_060147651.1;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 9145 9798 . - . ID=gene-LDO49_RS32035;Name=LDO49_RS32035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32035;old_locus_tag=BCEP4_690012 NZ_CAJZAV010000278.1 Protein Homology CDS 9145 9798 . - 0 ID=cds-WP_021163666.1;Parent=gene-LDO49_RS32035;Dbxref=GenBank:WP_021163666.1;Name=WP_021163666.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480999.1;locus_tag=LDO49_RS32035;product=TetR/AcrR family transcriptional regulator;protein_id=WP_021163666.1;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 9882 11006 . + . ID=gene-LDO49_RS32040;Name=LDO49_RS32040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32040;old_locus_tag=BCEP4_690014 NZ_CAJZAV010000278.1 Protein Homology CDS 9882 11006 . + 0 ID=cds-WP_060147650.1;Parent=gene-LDO49_RS32040;Dbxref=GenBank:WP_060147650.1;Name=WP_060147650.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497841.1;locus_tag=LDO49_RS32040;product=MBL fold metallo-hydrolase;protein_id=WP_060147650.1;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 11132 12148 . + . ID=gene-LDO49_RS32045;Name=LDO49_RS32045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32045;old_locus_tag=BCEP4_690013 NZ_CAJZAV010000278.1 Protein Homology CDS 11132 12148 . + 0 ID=cds-WP_060147649.1;Parent=gene-LDO49_RS32045;Dbxref=GenBank:WP_060147649.1;Name=WP_060147649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337157.1;locus_tag=LDO49_RS32045;product=AraC family transcriptional regulator;protein_id=WP_060147649.1;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 12654 12956 . - . ID=gene-LDO49_RS32050;Name=LDO49_RS32050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32050 NZ_CAJZAV010000278.1 GeneMarkS-2+ CDS 12654 12956 . - 0 ID=cds-WP_124475933.1;Parent=gene-LDO49_RS32050;Dbxref=GenBank:WP_124475933.1;Name=WP_124475933.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS32050;product=hypothetical protein;protein_id=WP_124475933.1;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 13955 14650 . + . ID=gene-LDO49_RS32055;Name=LDO49_RS32055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32055;old_locus_tag=BCEP4_690017 NZ_CAJZAV010000278.1 Protein Homology CDS 13955 14650 . + 0 ID=cds-WP_011350423.1;Parent=gene-LDO49_RS32055;Dbxref=GenBank:WP_011350423.1;Name=WP_011350423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399349.1;locus_tag=LDO49_RS32055;product=ParA family protein;protein_id=WP_011350423.1;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 14643 15674 . + . ID=gene-LDO49_RS32060;Name=LDO49_RS32060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32060;old_locus_tag=BCEP4_690018 NZ_CAJZAV010000278.1 Protein Homology CDS 14643 15674 . + 0 ID=cds-WP_060147648.1;Parent=gene-LDO49_RS32060;Dbxref=GenBank:WP_060147648.1;Name=WP_060147648.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660886.1;locus_tag=LDO49_RS32060;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_060147648.1;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 15769 17085 . - . ID=gene-LDO49_RS32065;Name=LDO49_RS32065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32065;old_locus_tag=BCEP4_690019 NZ_CAJZAV010000278.1 Protein Homology CDS 15769 17085 . - 0 ID=cds-WP_021163671.1;Parent=gene-LDO49_RS32065;Dbxref=GenBank:WP_021163671.1;Name=WP_021163671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753023.1;locus_tag=LDO49_RS32065;product=replication initiation protein;protein_id=WP_021163671.1;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 17217 17402 . - . ID=gene-LDO49_RS32070;Name=LDO49_RS32070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32070 NZ_CAJZAV010000278.1 GeneMarkS-2+ CDS 17217 17402 . - 0 ID=cds-WP_124844353.1;Parent=gene-LDO49_RS32070;Dbxref=GenBank:WP_124844353.1;Name=WP_124844353.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS32070;product=hypothetical protein;protein_id=WP_124844353.1;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 19638 19949 . + . ID=gene-LDO49_RS32075;Name=LDO49_RS32075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32075;old_locus_tag=BCEP4_690024 NZ_CAJZAV010000278.1 Protein Homology CDS 19638 19949 . + 0 ID=cds-WP_048028142.1;Parent=gene-LDO49_RS32075;Dbxref=GenBank:WP_048028142.1;Name=WP_048028142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759642.1;locus_tag=LDO49_RS32075;product=hypothetical protein;protein_id=WP_048028142.1;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 20131 21036 . - . ID=gene-LDO49_RS32080;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=LDO49_RS32080;old_locus_tag=BCEP4_690025 NZ_CAJZAV010000278.1 Protein Homology CDS 20131 21036 . - 0 ID=cds-WP_059551833.1;Parent=gene-LDO49_RS32080;Dbxref=GenBank:WP_059551833.1;Name=WP_059551833.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=gcvA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349220.1;locus_tag=LDO49_RS32080;product=transcriptional regulator GcvA;protein_id=WP_059551833.1;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 21177 22475 . + . ID=gene-LDO49_RS32085;Name=LDO49_RS32085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32085;old_locus_tag=BCEP4_690026 NZ_CAJZAV010000278.1 Protein Homology CDS 21177 22475 . + 0 ID=cds-WP_060147647.1;Parent=gene-LDO49_RS32085;Dbxref=GenBank:WP_060147647.1;Name=WP_060147647.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480991.1;locus_tag=LDO49_RS32085;product=adenylosuccinate synthase;protein_id=WP_060147647.1;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 22774 23715 . + . ID=gene-LDO49_RS32090;Name=LDO49_RS32090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32090;old_locus_tag=BCEP4_690028 NZ_CAJZAV010000278.1 Protein Homology CDS 22774 23715 . + 0 ID=cds-WP_059491808.1;Parent=gene-LDO49_RS32090;Dbxref=GenBank:WP_059491808.1;Name=WP_059491808.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660882.1;locus_tag=LDO49_RS32090;product=LysR family transcriptional regulator;protein_id=WP_059491808.1;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 23926 24894 . - . ID=gene-LDO49_RS32095;Name=LDO49_RS32095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32095;old_locus_tag=BCEP4_690029 NZ_CAJZAV010000278.1 Protein Homology CDS 23926 24894 . - 0 ID=cds-WP_060147645.1;Parent=gene-LDO49_RS32095;Dbxref=GenBank:WP_060147645.1;Name=WP_060147645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489075.1;locus_tag=LDO49_RS32095;product=AraC family transcriptional regulator;protein_id=WP_060147645.1;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 25491 26375 . + . ID=gene-LDO49_RS32100;Name=LDO49_RS32100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32100;old_locus_tag=BCEP4_690031 NZ_CAJZAV010000278.1 Protein Homology CDS 25491 26375 . + 0 ID=cds-WP_060147644.1;Parent=gene-LDO49_RS32100;Dbxref=GenBank:WP_060147644.1;Name=WP_060147644.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349300.1;locus_tag=LDO49_RS32100;product=LysR family transcriptional regulator;protein_id=WP_060147644.1;transl_table=11 NZ_CAJZAV010000278.1 RefSeq gene 26607 27147 . + . ID=gene-LDO49_RS32105;Name=LDO49_RS32105;end_range=27147,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32105;partial=true NZ_CAJZAV010000278.1 Protein Homology CDS 26607 27147 . + 0 ID=cds-WP_224052718.1;Parent=gene-LDO49_RS32105;Dbxref=GenBank:WP_224052718.1;Name=WP_224052718.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;end_range=27147,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197561.1;locus_tag=LDO49_RS32105;partial=true;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_224052718.1;transl_table=11 ##sequence-region NZ_CAJZAV010000279.1 1 189849 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000279.1 RefSeq region 1 189849 . + . ID=NZ_CAJZAV010000279.1:1..189849;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_7 NZ_CAJZAV010000279.1 RefSeq gene 1 1015 . + . ID=gene-LDO49_RS32110;Name=LDO49_RS32110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32110;old_locus_tag=BCEP4_70001;partial=true;start_range=.,1 NZ_CAJZAV010000279.1 Protein Homology CDS 1 1015 . + 1 ID=cds-WP_224052720.1;Parent=gene-LDO49_RS32110;Dbxref=GenBank:WP_224052720.1;Name=WP_224052720.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897907.1;locus_tag=LDO49_RS32110;partial=true;product=Dyp-type peroxidase;protein_id=WP_224052720.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 1082 2116 . + . ID=gene-LDO49_RS32115;Name=LDO49_RS32115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32115;old_locus_tag=BCEP4_70002 NZ_CAJZAV010000279.1 Protein Homology CDS 1082 2116 . + 0 ID=cds-WP_048024285.1;Parent=gene-LDO49_RS32115;Dbxref=GenBank:WP_048024285.1;Name=WP_048024285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027365.1;locus_tag=LDO49_RS32115;product=iron ABC transporter substrate-binding protein;protein_id=WP_048024285.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 2119 3717 . + . ID=gene-LDO49_RS32120;Name=LDO49_RS32120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32120;old_locus_tag=BCEP4_70003 NZ_CAJZAV010000279.1 Protein Homology CDS 2119 3717 . + 0 ID=cds-WP_060073376.1;Parent=gene-LDO49_RS32120;Dbxref=GenBank:WP_060073376.1;Name=WP_060073376.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351131.1;locus_tag=LDO49_RS32120;product=ABC transporter permease;protein_id=WP_060073376.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 3746 4795 . + . ID=gene-LDO49_RS32125;Name=LDO49_RS32125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32125;old_locus_tag=BCEP4_70004 NZ_CAJZAV010000279.1 Protein Homology CDS 3746 4795 . + 0 ID=cds-WP_060073378.1;Parent=gene-LDO49_RS32125;Dbxref=GenBank:WP_060073378.1;Name=WP_060073378.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351130.1;locus_tag=LDO49_RS32125;product=ABC transporter ATP-binding protein;protein_id=WP_060073378.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 4948 5463 . - . ID=gene-LDO49_RS32130;Name=LDO49_RS32130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32130;old_locus_tag=BCEP4_70005 NZ_CAJZAV010000279.1 Protein Homology CDS 4948 5463 . - 0 ID=cds-WP_059621492.1;Parent=gene-LDO49_RS32130;Dbxref=GenBank:WP_059621492.1;Name=WP_059621492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406354.1;locus_tag=LDO49_RS32130;product=SRPBCC family protein;protein_id=WP_059621492.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 5508 6140 . - . ID=gene-LDO49_RS32135;Name=LDO49_RS32135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32135;old_locus_tag=BCEP4_70006 NZ_CAJZAV010000279.1 Protein Homology CDS 5508 6140 . - 0 ID=cds-WP_027788221.1;Parent=gene-LDO49_RS32135;Dbxref=GenBank:WP_027788221.1;Name=WP_027788221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897912.1;locus_tag=LDO49_RS32135;product=LolA family protein;protein_id=WP_027788221.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 6137 6568 . - . ID=gene-LDO49_RS32140;Name=LDO49_RS32140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32140;old_locus_tag=BCEP4_70007 NZ_CAJZAV010000279.1 Protein Homology CDS 6137 6568 . - 0 ID=cds-WP_060073380.1;Parent=gene-LDO49_RS32140;Dbxref=GenBank:WP_060073380.1;Name=WP_060073380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351127.1;locus_tag=LDO49_RS32140;product=hypothetical protein;protein_id=WP_060073380.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 6597 7382 . - . ID=gene-LDO49_RS32145;Name=LDO49_RS32145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32145;old_locus_tag=BCEP4_70008 NZ_CAJZAV010000279.1 Protein Homology CDS 6597 7382 . - 0 ID=cds-WP_060073382.1;Parent=gene-LDO49_RS32145;Dbxref=GenBank:WP_060073382.1;Name=WP_060073382.1;Ontology_term=GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351126.1;locus_tag=LDO49_RS32145;product=anti-sigma factor family protein;protein_id=WP_060073382.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 7379 7894 . - . ID=gene-LDO49_RS32150;Name=LDO49_RS32150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32150;old_locus_tag=BCEP4_70009 NZ_CAJZAV010000279.1 Protein Homology CDS 7379 7894 . - 0 ID=cds-WP_021164148.1;Parent=gene-LDO49_RS32150;Dbxref=GenBank:WP_021164148.1;Name=WP_021164148.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400979.1;locus_tag=LDO49_RS32150;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_021164148.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 7922 8281 . - . ID=gene-LDO49_RS32155;Name=LDO49_RS32155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32155;old_locus_tag=BCEP4_70010 NZ_CAJZAV010000279.1 Protein Homology CDS 7922 8281 . - 0 ID=cds-WP_021164149.1;Parent=gene-LDO49_RS32155;Dbxref=GenBank:WP_021164149.1;Name=WP_021164149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544726.1;locus_tag=LDO49_RS32155;product=COG4315 family predicted lipoprotein;protein_id=WP_021164149.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 8280 8492 . + . ID=gene-LDO49_RS32160;Name=LDO49_RS32160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32160 NZ_CAJZAV010000279.1 GeneMarkS-2+ CDS 8280 8492 . + 0 ID=cds-WP_021164150.1;Parent=gene-LDO49_RS32160;Dbxref=GenBank:WP_021164150.1;Name=WP_021164150.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS32160;product=hypothetical protein;protein_id=WP_021164150.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 8568 10537 . - . ID=gene-LDO49_RS32165;Name=LDO49_RS32165;end_range=10537,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32165;old_locus_tag=BCEP4_70011;partial=true NZ_CAJZAV010000279.1 Protein Homology CDS 8568 10537 . - 2 ID=cds-WP_443798019.1;Parent=gene-LDO49_RS32165;Dbxref=GenBank:WP_443798019.1;Name=WP_443798019.1;end_range=10537,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897917.1;locus_tag=LDO49_RS32165;partial=true;product=beta strand repeat-containing protein;protein_id=WP_443798019.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq pseudogene 10548 11031 . - . ID=gene-LDO49_RS38375;Name=LDO49_RS38375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38375;old_locus_tag=BCEP4_70012;partial=true;pseudo=true;start_range=.,10548 NZ_CAJZAV010000279.1 Protein Homology CDS 10548 11031 . - 0 ID=cds-LDO49_RS38375;Parent=gene-LDO49_RS38375;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351123.1;locus_tag=LDO49_RS38375;partial=true;product=beta strand repeat-containing protein;pseudo=true;start_range=.,10548;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 11531 12775 . - . ID=gene-LDO49_RS32170;Name=LDO49_RS32170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32170;old_locus_tag=BCEP4_70013 NZ_CAJZAV010000279.1 Protein Homology CDS 11531 12775 . - 0 ID=cds-WP_060073386.1;Parent=gene-LDO49_RS32170;Dbxref=GenBank:WP_060073386.1;Name=WP_060073386.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759594.1;locus_tag=LDO49_RS32170;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_060073386.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 12843 13622 . - . ID=gene-LDO49_RS32175;Name=LDO49_RS32175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32175;old_locus_tag=BCEP4_70014 NZ_CAJZAV010000279.1 Protein Homology CDS 12843 13622 . - 0 ID=cds-WP_027788228.1;Parent=gene-LDO49_RS32175;Dbxref=GenBank:WP_027788228.1;Name=WP_027788228.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544721.1;locus_tag=LDO49_RS32175;product=ABC transporter substrate-binding protein;protein_id=WP_027788228.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 14001 14940 . + . ID=gene-LDO49_RS32180;Name=LDO49_RS32180;end_range=14940,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32180;old_locus_tag=BCEP4_70017;partial=true NZ_CAJZAV010000279.1 Protein Homology CDS 14001 14940 . + 0 ID=cds-WP_224052735.1;Parent=gene-LDO49_RS32180;Dbxref=GenBank:WP_224052735.1;Name=WP_224052735.1;end_range=14940,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214008.1;locus_tag=LDO49_RS32180;partial=true;product=ornithine cyclodeaminase family protein;protein_id=WP_224052735.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 14951 15694 . + . ID=gene-LDO49_RS32185;Name=LDO49_RS32185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32185;old_locus_tag=BCEP4_70018;partial=true;start_range=.,14951 NZ_CAJZAV010000279.1 Protein Homology CDS 14951 15694 . + 0 ID=cds-WP_443798020.1;Parent=gene-LDO49_RS32185;Dbxref=GenBank:WP_443798020.1;Name=WP_443798020.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406367.1;locus_tag=LDO49_RS32185;partial=true;product=helix-turn-helix transcriptional regulator;protein_id=WP_443798020.1;start_range=.,14951;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 15902 16633 . + . ID=gene-LDO49_RS32190;Name=LDO49_RS32190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32190;old_locus_tag=BCEP4_70019 NZ_CAJZAV010000279.1 Protein Homology CDS 15902 16633 . + 0 ID=cds-WP_224052721.1;Parent=gene-LDO49_RS32190;Dbxref=GenBank:WP_224052721.1;Name=WP_224052721.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363207.1;locus_tag=LDO49_RS32190;product=DsbA family oxidoreductase;protein_id=WP_224052721.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 16770 18209 . + . ID=gene-LDO49_RS32195;Name=LDO49_RS32195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32195;old_locus_tag=BCEP4_70020 NZ_CAJZAV010000279.1 Protein Homology CDS 16770 18209 . + 0 ID=cds-WP_224052722.1;Parent=gene-LDO49_RS32195;Dbxref=GenBank:WP_224052722.1;Name=WP_224052722.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889464.1;locus_tag=LDO49_RS32195;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_224052722.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 18509 19297 . + . ID=gene-LDO49_RS32200;Name=LDO49_RS32200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32200;old_locus_tag=BCEP4_70021 NZ_CAJZAV010000279.1 Protein Homology CDS 18509 19297 . + 0 ID=cds-WP_021157126.1;Parent=gene-LDO49_RS32200;Dbxref=GenBank:WP_021157126.1;Name=WP_021157126.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544716.1;locus_tag=LDO49_RS32200;product=sulfite exporter TauE/SafE family protein;protein_id=WP_021157126.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 19418 19855 . - . ID=gene-LDO49_RS32205;Name=LDO49_RS32205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32205;old_locus_tag=BCEP4_70022 NZ_CAJZAV010000279.1 Protein Homology CDS 19418 19855 . - 0 ID=cds-WP_059620984.1;Parent=gene-LDO49_RS32205;Dbxref=GenBank:WP_059620984.1;Name=WP_059620984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018904222.1;locus_tag=LDO49_RS32205;product=hypothetical protein;protein_id=WP_059620984.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 19855 20412 . - . ID=gene-LDO49_RS32210;Name=LDO49_RS32210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32210;old_locus_tag=BCEP4_70023 NZ_CAJZAV010000279.1 Protein Homology CDS 19855 20412 . - 0 ID=cds-WP_059590768.1;Parent=gene-LDO49_RS32210;Dbxref=GenBank:WP_059590768.1;Name=WP_059590768.1;Ontology_term=GO:0000166,GO:0016779,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleotidyltransferase activity|0016779||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328011.1;locus_tag=LDO49_RS32210;product=nucleotidyltransferase domain-containing protein;protein_id=WP_059590768.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 20672 22507 . - . ID=gene-LDO49_RS32215;Name=LDO49_RS32215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32215;old_locus_tag=BCEP4_70026 NZ_CAJZAV010000279.1 Protein Homology CDS 20672 22507 . - 0 ID=cds-WP_042973160.1;Parent=gene-LDO49_RS32215;Dbxref=GenBank:WP_042973160.1;Name=WP_042973160.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185580.1;locus_tag=LDO49_RS32215;product=S10 family peptidase;protein_id=WP_042973160.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 23120 25210 . - . ID=gene-LDO49_RS32220;Name=LDO49_RS32220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32220;old_locus_tag=BCEP4_70029 NZ_CAJZAV010000279.1 Protein Homology CDS 23120 25210 . - 0 ID=cds-WP_224052723.1;Parent=gene-LDO49_RS32220;Dbxref=GenBank:WP_224052723.1;Name=WP_224052723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656103.1;locus_tag=LDO49_RS32220;product=D-(-)-3-hydroxybutyrate oligomer hydrolase;protein_id=WP_224052723.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 25347 25712 . - . ID=gene-LDO49_RS32225;Name=LDO49_RS32225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32225;old_locus_tag=BCEP4_70030 NZ_CAJZAV010000279.1 Protein Homology CDS 25347 25712 . - 0 ID=cds-WP_021157129.1;Parent=gene-LDO49_RS32225;Dbxref=GenBank:WP_021157129.1;Name=WP_021157129.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759602.1;locus_tag=LDO49_RS32225;product=BON domain-containing protein;protein_id=WP_021157129.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 26136 27578 . + . ID=gene-LDO49_RS32230;Name=LDO49_RS32230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32230;old_locus_tag=BCEP4_70031 NZ_CAJZAV010000279.1 Protein Homology CDS 26136 27578 . + 0 ID=cds-WP_224052724.1;Parent=gene-LDO49_RS32230;Dbxref=GenBank:WP_224052724.1;Name=WP_224052724.1;Ontology_term=GO:0055085,GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351112.1;locus_tag=LDO49_RS32230;product=TAXI family TRAP transporter solute-binding subunit;protein_id=WP_224052724.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 27673 28311 . + . ID=gene-LDO49_RS32235;Name=LDO49_RS32235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32235;old_locus_tag=BCEP4_70032 NZ_CAJZAV010000279.1 Protein Homology CDS 27673 28311 . + 0 ID=cds-WP_021157130.1;Parent=gene-LDO49_RS32235;Dbxref=GenBank:WP_021157130.1;Name=WP_021157130.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544709.1;locus_tag=LDO49_RS32235;product=DsbA family protein;protein_id=WP_021157130.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 28380 29327 . + . ID=gene-LDO49_RS32240;Name=LDO49_RS32240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32240;old_locus_tag=BCEP4_70033 NZ_CAJZAV010000279.1 Protein Homology CDS 28380 29327 . + 0 ID=cds-WP_021157131.1;Parent=gene-LDO49_RS32240;Dbxref=GenBank:WP_021157131.1;Name=WP_021157131.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417109.1;locus_tag=LDO49_RS32240;product=LysR family transcriptional regulator;protein_id=WP_021157131.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 29367 29768 . - . ID=gene-LDO49_RS32245;Name=LDO49_RS32245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32245;old_locus_tag=BCEP4_70034 NZ_CAJZAV010000279.1 Protein Homology CDS 29367 29768 . - 0 ID=cds-WP_021157132.1;Parent=gene-LDO49_RS32245;Dbxref=GenBank:WP_021157132.1;Name=WP_021157132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656100.1;locus_tag=LDO49_RS32245;product=nuclear transport factor 2 family protein;protein_id=WP_021157132.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 29857 30474 . - . ID=gene-LDO49_RS32250;Name=xdhC;gbkey=Gene;gene=xdhC;gene_biotype=protein_coding;locus_tag=LDO49_RS32250;old_locus_tag=BCEP4_70035 NZ_CAJZAV010000279.1 Protein Homology CDS 29857 30474 . - 0 ID=cds-WP_224052725.1;Parent=gene-LDO49_RS32250;Dbxref=GenBank:WP_224052725.1;Name=WP_224052725.1;Ontology_term=GO:0009115,GO:0065003,GO:0043546;gbkey=CDS;gene=xdhC;go_function=molybdopterin cofactor binding|0043546||IEA;go_process=xanthine catabolic process|0009115||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401526.1;locus_tag=LDO49_RS32250;product=xanthine dehydrogenase accessory protein XdhC;protein_id=WP_224052725.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 30559 32922 . - . ID=gene-LDO49_RS32255;Name=xdhB;gbkey=Gene;gene=xdhB;gene_biotype=protein_coding;locus_tag=LDO49_RS32255;old_locus_tag=BCEP4_70036 NZ_CAJZAV010000279.1 Protein Homology CDS 30559 32922 . - 0 ID=cds-WP_224052726.1;Parent=gene-LDO49_RS32255;Dbxref=GenBank:WP_224052726.1;Name=WP_224052726.1;Ontology_term=GO:0009115,GO:0004854,GO:0030151;gbkey=CDS;gene=xdhB;go_function=xanthine dehydrogenase activity|0004854||IEA,molybdenum ion binding|0030151||IEA;go_process=xanthine catabolic process|0009115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883458.1;locus_tag=LDO49_RS32255;product=xanthine dehydrogenase molybdopterin binding subunit;protein_id=WP_224052726.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 32941 34485 . - . ID=gene-LDO49_RS32260;Name=xdhA;gbkey=Gene;gene=xdhA;gene_biotype=protein_coding;locus_tag=LDO49_RS32260;old_locus_tag=BCEP4_70037 NZ_CAJZAV010000279.1 Protein Homology CDS 32941 34485 . - 0 ID=cds-WP_021157135.1;Parent=gene-LDO49_RS32260;Dbxref=GenBank:WP_021157135.1;Name=WP_021157135.1;Ontology_term=GO:0009115,GO:0004854,GO:0050660;gbkey=CDS;gene=xdhA;go_function=xanthine dehydrogenase activity|0004854||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=xanthine catabolic process|0009115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351106.1;locus_tag=LDO49_RS32260;product=xanthine dehydrogenase small subunit;protein_id=WP_021157135.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 34834 36048 . + . ID=gene-LDO49_RS32265;Name=LDO49_RS32265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32265;old_locus_tag=BCEP4_70040 NZ_CAJZAV010000279.1 Protein Homology CDS 34834 36048 . + 0 ID=cds-WP_059709710.1;Parent=gene-LDO49_RS32265;Dbxref=GenBank:WP_059709710.1;Name=WP_059709710.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484942.1;locus_tag=LDO49_RS32265;product=MFS transporter;protein_id=WP_059709710.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 36144 36740 . - . ID=gene-LDO49_RS32270;Name=LDO49_RS32270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32270;old_locus_tag=BCEP4_70041 NZ_CAJZAV010000279.1 Protein Homology CDS 36144 36740 . - 0 ID=cds-WP_224052727.1;Parent=gene-LDO49_RS32270;Dbxref=GenBank:WP_224052727.1;Name=WP_224052727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333331.1;locus_tag=LDO49_RS32270;product=RES family NAD+ phosphorylase;protein_id=WP_224052727.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 36750 37421 . - . ID=gene-LDO49_RS32275;Name=LDO49_RS32275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32275;old_locus_tag=BCEP4_70042 NZ_CAJZAV010000279.1 Protein Homology CDS 36750 37421 . - 0 ID=cds-WP_059487243.1;Parent=gene-LDO49_RS32275;Dbxref=GenBank:WP_059487243.1;Name=WP_059487243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019450243.1;locus_tag=LDO49_RS32275;product=hypothetical protein;protein_id=WP_059487243.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 37535 38425 . - . ID=gene-LDO49_RS32280;Name=LDO49_RS32280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32280;old_locus_tag=BCEP4_70043 NZ_CAJZAV010000279.1 Protein Homology CDS 37535 38425 . - 0 ID=cds-WP_224052728.1;Parent=gene-LDO49_RS32280;Dbxref=GenBank:WP_224052728.1;Name=WP_224052728.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544702.1;locus_tag=LDO49_RS32280;product=DMT family transporter;protein_id=WP_224052728.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 38563 39498 . + . ID=gene-LDO49_RS32285;Name=LDO49_RS32285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32285;old_locus_tag=BCEP4_70044 NZ_CAJZAV010000279.1 Protein Homology CDS 38563 39498 . + 0 ID=cds-WP_060073406.1;Parent=gene-LDO49_RS32285;Dbxref=GenBank:WP_060073406.1;Name=WP_060073406.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417086.1;locus_tag=LDO49_RS32285;product=AraC family transcriptional regulator;protein_id=WP_060073406.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 39517 40728 . - . ID=gene-LDO49_RS32290;Name=LDO49_RS32290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32290;old_locus_tag=BCEP4_70045 NZ_CAJZAV010000279.1 Protein Homology CDS 39517 40728 . - 0 ID=cds-WP_027788247.1;Parent=gene-LDO49_RS32290;Dbxref=GenBank:WP_027788247.1;Name=WP_027788247.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351102.1;locus_tag=LDO49_RS32290;product=pyridoxal-phosphate-dependent aminotransferase family protein;protein_id=WP_027788247.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 40794 41444 . - . ID=gene-LDO49_RS32295;Name=LDO49_RS32295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32295 NZ_CAJZAV010000279.1 GeneMarkS-2+ CDS 40794 41444 . - 0 ID=cds-WP_155634216.1;Parent=gene-LDO49_RS32295;Dbxref=GenBank:WP_155634216.1;Name=WP_155634216.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS32295;product=hypothetical protein;protein_id=WP_155634216.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 41484 42467 . + . ID=gene-LDO49_RS32300;Name=LDO49_RS32300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32300;old_locus_tag=BCEP4_70047 NZ_CAJZAV010000279.1 Protein Homology CDS 41484 42467 . + 0 ID=cds-WP_021157144.1;Parent=gene-LDO49_RS32300;Dbxref=GenBank:WP_021157144.1;Name=WP_021157144.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010105992.1;locus_tag=LDO49_RS32300;product=LysR family transcriptional regulator;protein_id=WP_021157144.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 42498 43496 . + . ID=gene-LDO49_RS32305;Name=LDO49_RS32305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32305;old_locus_tag=BCEP4_70048 NZ_CAJZAV010000279.1 Protein Homology CDS 42498 43496 . + 0 ID=cds-WP_048023666.1;Parent=gene-LDO49_RS32305;Dbxref=GenBank:WP_048023666.1;Name=WP_048023666.1;Ontology_term=GO:0008720,GO:0070404;gbkey=CDS;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,NADH binding|0070404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496703.1;locus_tag=LDO49_RS32305;product=2-hydroxyacid dehydrogenase;protein_id=WP_048023666.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 43676 44455 . + . ID=gene-LDO49_RS32310;Name=bluB;gbkey=Gene;gene=bluB;gene_biotype=protein_coding;locus_tag=LDO49_RS32310;old_locus_tag=BCEP4_70049 NZ_CAJZAV010000279.1 Protein Homology CDS 43676 44455 . + 0 ID=cds-WP_060073408.1;Parent=gene-LDO49_RS32310;Dbxref=GenBank:WP_060073408.1;Name=WP_060073408.1;Ontology_term=GO:0009236,GO:0032363,GO:0016722;gbkey=CDS;gene=bluB;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,FMN catabolic process|0032363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544699.1;locus_tag=LDO49_RS32310;product=5%2C6-dimethylbenzimidazole synthase;protein_id=WP_060073408.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 44700 45869 . + . ID=gene-LDO49_RS32315;Name=LDO49_RS32315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32315;old_locus_tag=BCEP4_70050 NZ_CAJZAV010000279.1 Protein Homology CDS 44700 45869 . + 0 ID=cds-WP_021157147.1;Parent=gene-LDO49_RS32315;Dbxref=GenBank:WP_021157147.1;Name=WP_021157147.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544698.1;locus_tag=LDO49_RS32315;product=MFS transporter;protein_id=WP_021157147.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 45969 47129 . + . ID=gene-LDO49_RS32320;Name=LDO49_RS32320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32320;old_locus_tag=BCEP4_70051 NZ_CAJZAV010000279.1 Protein Homology CDS 45969 47129 . + 0 ID=cds-WP_060073410.1;Parent=gene-LDO49_RS32320;Dbxref=GenBank:WP_060073410.1;Name=WP_060073410.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765053.1;locus_tag=LDO49_RS32320;product=MFS transporter;protein_id=WP_060073410.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 47352 48656 . - . ID=gene-LDO49_RS32325;Name=fahA;gbkey=Gene;gene=fahA;gene_biotype=protein_coding;locus_tag=LDO49_RS32325;old_locus_tag=BCEP4_70052 NZ_CAJZAV010000279.1 Protein Homology CDS 47352 48656 . - 0 ID=cds-WP_060073412.1;Parent=gene-LDO49_RS32325;Dbxref=GenBank:WP_060073412.1;Name=WP_060073412.1;Ontology_term=GO:0006559,GO:0006572,GO:0004334;gbkey=CDS;gene=fahA;go_function=fumarylacetoacetase activity|0004334||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,L-tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214027.1;locus_tag=LDO49_RS32325;product=fumarylacetoacetase;protein_id=WP_060073412.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 48653 49987 . - . ID=gene-LDO49_RS32330;Name=hmgA;gbkey=Gene;gene=hmgA;gene_biotype=protein_coding;locus_tag=LDO49_RS32330;old_locus_tag=BCEP4_70053 NZ_CAJZAV010000279.1 Protein Homology CDS 48653 49987 . - 0 ID=cds-WP_060073413.1;Parent=gene-LDO49_RS32330;Dbxref=GenBank:WP_060073413.1;Name=WP_060073413.1;Ontology_term=GO:0006559,GO:0006572,GO:0004411;gbkey=CDS;gene=hmgA;go_function=homogentisate 1%2C2-dioxygenase activity|0004411||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,L-tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214028.1;locus_tag=LDO49_RS32330;product=homogentisate 1%2C2-dioxygenase;protein_id=WP_060073413.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 50003 51364 . - . ID=gene-LDO49_RS32335;Name=LDO49_RS32335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32335;old_locus_tag=BCEP4_70054 NZ_CAJZAV010000279.1 Protein Homology CDS 50003 51364 . - 0 ID=cds-WP_060073415.1;Parent=gene-LDO49_RS32335;Dbxref=GenBank:WP_060073415.1;Name=WP_060073415.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722516.1;locus_tag=LDO49_RS32335;product=MFS transporter;protein_id=WP_060073415.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 51361 51591 . - . ID=gene-LDO49_RS32340;Name=LDO49_RS32340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32340;old_locus_tag=BCEP4_70055 NZ_CAJZAV010000279.1 Protein Homology CDS 51361 51591 . - 0 ID=cds-WP_059529120.1;Parent=gene-LDO49_RS32340;Dbxref=GenBank:WP_059529120.1;Name=WP_059529120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476783.1;locus_tag=LDO49_RS32340;product=DUF2783 domain-containing protein;protein_id=WP_059529120.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 51620 53272 . - . ID=gene-LDO49_RS32345;Name=LDO49_RS32345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32345;old_locus_tag=BCEP4_70056 NZ_CAJZAV010000279.1 Protein Homology CDS 51620 53272 . - 0 ID=cds-WP_060073417.1;Parent=gene-LDO49_RS32345;Dbxref=GenBank:WP_060073417.1;Name=WP_060073417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484900.1;locus_tag=LDO49_RS32345;product=FAD-dependent oxidoreductase;protein_id=WP_060073417.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 53658 54461 . + . ID=gene-LDO49_RS32350;Name=LDO49_RS32350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32350;old_locus_tag=BCEP4_70058 NZ_CAJZAV010000279.1 Protein Homology CDS 53658 54461 . + 0 ID=cds-WP_021157154.1;Parent=gene-LDO49_RS32350;Dbxref=GenBank:WP_021157154.1;Name=WP_021157154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760627.1;locus_tag=LDO49_RS32350;product=EAL domain-containing protein;protein_id=WP_021157154.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 54608 55018 . - . ID=gene-LDO49_RS32355;Name=LDO49_RS32355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32355;old_locus_tag=BCEP4_70059 NZ_CAJZAV010000279.1 Protein Homology CDS 54608 55018 . - 0 ID=cds-WP_059649581.1;Parent=gene-LDO49_RS32355;Dbxref=GenBank:WP_059649581.1;Name=WP_059649581.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656083.1;locus_tag=LDO49_RS32355;product=GFA family protein;protein_id=WP_059649581.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 55198 55989 . - . ID=gene-LDO49_RS32360;Name=LDO49_RS32360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32360;old_locus_tag=BCEP4_70061 NZ_CAJZAV010000279.1 Protein Homology CDS 55198 55989 . - 0 ID=cds-WP_021157156.1;Parent=gene-LDO49_RS32360;Dbxref=GenBank:WP_021157156.1;Name=WP_021157156.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765061.1;locus_tag=LDO49_RS32360;product=IclR family transcriptional regulator;protein_id=WP_021157156.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 56117 57304 . + . ID=gene-LDO49_RS32365;Name=LDO49_RS32365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32365;old_locus_tag=BCEP4_70062 NZ_CAJZAV010000279.1 Protein Homology CDS 56117 57304 . + 0 ID=cds-WP_021157157.1;Parent=gene-LDO49_RS32365;Dbxref=GenBank:WP_021157157.1;Name=WP_021157157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527638.1;locus_tag=LDO49_RS32365;product=acyl-CoA dehydrogenase;protein_id=WP_021157157.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 57460 58098 . - . ID=gene-LDO49_RS32370;Name=LDO49_RS32370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32370;old_locus_tag=BCEP4_70063 NZ_CAJZAV010000279.1 Protein Homology CDS 57460 58098 . - 0 ID=cds-WP_021157158.1;Parent=gene-LDO49_RS32370;Dbxref=GenBank:WP_021157158.1;Name=WP_021157158.1;Ontology_term=GO:0098869,GO:0008379,GO:0051920;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA,peroxiredoxin activity|0051920||IEA;go_process=cellular oxidant detoxification|0098869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003265121.1;locus_tag=LDO49_RS32370;product=peroxiredoxin;protein_id=WP_021157158.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 58184 58384 . + . ID=gene-LDO49_RS32375;Name=LDO49_RS32375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32375 NZ_CAJZAV010000279.1 GeneMarkS-2+ CDS 58184 58384 . + 0 ID=cds-WP_141667402.1;Parent=gene-LDO49_RS32375;Dbxref=GenBank:WP_141667402.1;Name=WP_141667402.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS32375;product=hypothetical protein;protein_id=WP_141667402.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 58417 58719 . + . ID=gene-LDO49_RS32380;Name=LDO49_RS32380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32380;old_locus_tag=BCEP4_70065 NZ_CAJZAV010000279.1 Protein Homology CDS 58417 58719 . + 0 ID=cds-WP_006494044.1;Parent=gene-LDO49_RS32380;Dbxref=GenBank:WP_006494044.1;Name=WP_006494044.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883416.1;locus_tag=LDO49_RS32380;product=DUF883 family protein;protein_id=WP_006494044.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 58842 59231 . + . ID=gene-LDO49_RS32385;Name=LDO49_RS32385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32385;old_locus_tag=BCEP4_70066 NZ_CAJZAV010000279.1 Protein Homology CDS 58842 59231 . + 0 ID=cds-WP_021157159.1;Parent=gene-LDO49_RS32385;Dbxref=GenBank:WP_021157159.1;Name=WP_021157159.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185460.1;locus_tag=LDO49_RS32385;product=phage holin family protein;protein_id=WP_021157159.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 59275 59718 . + . ID=gene-LDO49_RS32390;Name=LDO49_RS32390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32390;old_locus_tag=BCEP4_70067 NZ_CAJZAV010000279.1 Protein Homology CDS 59275 59718 . + 0 ID=cds-WP_021157160.1;Parent=gene-LDO49_RS32390;Dbxref=GenBank:WP_021157160.1;Name=WP_021157160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484985.1;locus_tag=LDO49_RS32390;product=DUF3318 domain-containing protein;protein_id=WP_021157160.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 59773 60201 . - . ID=gene-LDO49_RS32395;Name=LDO49_RS32395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32395;old_locus_tag=BCEP4_70068 NZ_CAJZAV010000279.1 Protein Homology CDS 59773 60201 . - 0 ID=cds-WP_124475150.1;Parent=gene-LDO49_RS32395;Dbxref=GenBank:WP_124475150.1;Name=WP_124475150.1;Ontology_term=GO:0043683,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754603.1;locus_tag=LDO49_RS32395;product=type IV pilin protein;protein_id=WP_124475150.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 60216 60677 . - . ID=gene-LDO49_RS32400;Name=LDO49_RS32400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32400;old_locus_tag=BCEP4_70069 NZ_CAJZAV010000279.1 Protein Homology CDS 60216 60677 . - 0 ID=cds-WP_048026692.1;Parent=gene-LDO49_RS32400;Dbxref=GenBank:WP_048026692.1;Name=WP_048026692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406391.1;locus_tag=LDO49_RS32400;product=pilus assembly protein;protein_id=WP_048026692.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 60881 61714 . - . ID=gene-LDO49_RS32405;Name=LDO49_RS32405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32405;old_locus_tag=BCEP4_70070 NZ_CAJZAV010000279.1 Protein Homology CDS 60881 61714 . - 0 ID=cds-WP_060073421.1;Parent=gene-LDO49_RS32405;Dbxref=GenBank:WP_060073421.1;Name=WP_060073421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351082.1;locus_tag=LDO49_RS32405;product=type IV pilus assembly protein;protein_id=WP_060073421.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 61704 62105 . - . ID=gene-LDO49_RS32410;Name=LDO49_RS32410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32410;old_locus_tag=BCEP4_70071 NZ_CAJZAV010000279.1 Protein Homology CDS 61704 62105 . - 0 ID=cds-WP_060073423.1;Parent=gene-LDO49_RS32410;Dbxref=GenBank:WP_060073423.1;Name=WP_060073423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417101.1;locus_tag=LDO49_RS32410;product=hypothetical protein;protein_id=WP_060073423.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 62111 62674 . - . ID=gene-LDO49_RS32415;Name=LDO49_RS32415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32415;old_locus_tag=BCEP4_70072 NZ_CAJZAV010000279.1 Protein Homology CDS 62111 62674 . - 0 ID=cds-WP_060073425.1;Parent=gene-LDO49_RS32415;Dbxref=GenBank:WP_060073425.1;Name=WP_060073425.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351080.1;locus_tag=LDO49_RS32415;product=GspH/FimT family pseudopilin;protein_id=WP_060073425.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 62828 63307 . - . ID=gene-LDO49_RS32420;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=LDO49_RS32420;old_locus_tag=BCEP4_70073 NZ_CAJZAV010000279.1 Protein Homology CDS 62828 63307 . - 0 ID=cds-WP_006476792.1;Parent=gene-LDO49_RS32420;Dbxref=GenBank:WP_006476792.1;Name=WP_006476792.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476792.1;locus_tag=LDO49_RS32420;product=transcriptional regulator NrdR;protein_id=WP_006476792.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 63314 64561 . - . ID=gene-LDO49_RS32425;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=LDO49_RS32425;old_locus_tag=BCEP4_70074 NZ_CAJZAV010000279.1 Protein Homology CDS 63314 64561 . - 0 ID=cds-WP_048026689.1;Parent=gene-LDO49_RS32425;Dbxref=GenBank:WP_048026689.1;Name=WP_048026689.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018442488.1;locus_tag=LDO49_RS32425;product=serine hydroxymethyltransferase;protein_id=WP_048026689.1;transl_table=11 NZ_CAJZAV010000279.1 cmsearch riboswitch 64699 64799 . - . ID=id-NZ_CAJZAV010000279.1:64699..64799;Dbxref=RFAM:RF01750;Note=ZMP/ZTP riboswitches appear to regulate genes involved in one-carbon metabolism;bound_moiety=5-aminoimidazole-4-carboxamide ribonucleotide (ZMP)/ 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-triphosphate (ZMT);gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAV010000279.1 RefSeq gene 64980 65726 . + . ID=gene-LDO49_RS32430;Name=LDO49_RS32430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32430;old_locus_tag=BCEP4_70075 NZ_CAJZAV010000279.1 Protein Homology CDS 64980 65726 . + 0 ID=cds-WP_059709697.1;Parent=gene-LDO49_RS32430;Dbxref=GenBank:WP_059709697.1;Name=WP_059709697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696778.1;locus_tag=LDO49_RS32430;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_059709697.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 65828 66313 . + . ID=gene-LDO49_RS32435;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=LDO49_RS32435;old_locus_tag=BCEP4_70076 NZ_CAJZAV010000279.1 Protein Homology CDS 65828 66313 . + 0 ID=cds-WP_042973175.1;Parent=gene-LDO49_RS32435;Dbxref=GenBank:WP_042973175.1;Name=WP_042973175.1;Ontology_term=GO:0047617,GO:0005737;gbkey=CDS;gene=ybgC;go_component=cytoplasm|0005737||IEA;go_function=fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327980.1;locus_tag=LDO49_RS32435;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_042973175.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 66444 67121 . + . ID=gene-LDO49_RS32440;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=LDO49_RS32440;old_locus_tag=BCEP4_70077 NZ_CAJZAV010000279.1 Protein Homology CDS 66444 67121 . + 0 ID=cds-WP_021157170.1;Parent=gene-LDO49_RS32440;Dbxref=GenBank:WP_021157170.1;Name=WP_021157170.1;Ontology_term=GO:0043213,GO:0016020;gbkey=CDS;gene=tolQ;go_component=membrane|0016020||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091489.1;locus_tag=LDO49_RS32440;product=protein TolQ;protein_id=WP_021157170.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 67132 67581 . + . ID=gene-LDO49_RS32445;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=LDO49_RS32445;old_locus_tag=BCEP4_70078 NZ_CAJZAV010000279.1 Protein Homology CDS 67132 67581 . + 0 ID=cds-WP_011351075.1;Parent=gene-LDO49_RS32445;Dbxref=GenBank:WP_011351075.1;Name=WP_011351075.1;Ontology_term=GO:0061024,GO:1902600,GO:0015078,GO:0098567;gbkey=CDS;gene=tolR;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=membrane organization|0061024||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194863.1;locus_tag=LDO49_RS32445;product=protein TolR;protein_id=WP_011351075.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 67578 68648 . + . ID=gene-LDO49_RS32450;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=LDO49_RS32450;old_locus_tag=BCEP4_70079 NZ_CAJZAV010000279.1 Protein Homology CDS 67578 68648 . + 0 ID=cds-WP_021157172.1;Parent=gene-LDO49_RS32450;Dbxref=GenBank:WP_021157172.1;Name=WP_021157172.1;Ontology_term=GO:0006810,GO:0005215,GO:0098567;gbkey=CDS;gene=tolA;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406396.1;locus_tag=LDO49_RS32450;product=cell envelope integrity protein TolA;protein_id=WP_021157172.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 68758 70053 . + . ID=gene-LDO49_RS32455;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=LDO49_RS32455;old_locus_tag=BCEP4_70080 NZ_CAJZAV010000279.1 Protein Homology CDS 68758 70053 . + 0 ID=cds-WP_027788267.1;Parent=gene-LDO49_RS32455;Dbxref=GenBank:WP_027788267.1;Name=WP_027788267.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351073.1;locus_tag=LDO49_RS32455;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_027788267.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 70071 70583 . + . ID=gene-LDO49_RS32460;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=LDO49_RS32460;old_locus_tag=BCEP4_70081 NZ_CAJZAV010000279.1 Protein Homology CDS 70071 70583 . + 0 ID=cds-WP_021157174.1;Parent=gene-LDO49_RS32460;Dbxref=GenBank:WP_021157174.1;Name=WP_021157174.1;Ontology_term=GO:0009279;gbkey=CDS;gene=pal;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186227.1;locus_tag=LDO49_RS32460;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_021157174.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 70603 71352 . + . ID=gene-LDO49_RS32465;Name=ybgF;gbkey=Gene;gene=ybgF;gene_biotype=protein_coding;locus_tag=LDO49_RS32465;old_locus_tag=BCEP4_70082 NZ_CAJZAV010000279.1 Protein Homology CDS 70603 71352 . + 0 ID=cds-WP_021157175.1;Parent=gene-LDO49_RS32465;Dbxref=GenBank:WP_021157175.1;Name=WP_021157175.1;Ontology_term=GO:0005515;gbkey=CDS;gene=ybgF;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025426.1;locus_tag=LDO49_RS32465;product=tol-pal system protein YbgF;protein_id=WP_021157175.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 71461 71537 . + . ID=gene-LDO49_RS32470;Name=LDO49_RS32470;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS32470;old_locus_tag=BCEP4_TRNA5 NZ_CAJZAV010000279.1 tRNAscan-SE tRNA 71461 71537 . + . ID=rna-LDO49_RS32470;Parent=gene-LDO49_RS32470;anticodon=(pos:71495..71497);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS32470;product=tRNA-Lys NZ_CAJZAV010000279.1 tRNAscan-SE exon 71461 71537 . + . ID=exon-LDO49_RS32470-1;Parent=rna-LDO49_RS32470;anticodon=(pos:71495..71497);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS32470;product=tRNA-Lys NZ_CAJZAV010000279.1 RefSeq gene 71636 72046 . - . ID=gene-LDO49_RS32475;Name=LDO49_RS32475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32475;old_locus_tag=BCEP4_70084 NZ_CAJZAV010000279.1 GeneMarkS-2+ CDS 71636 72046 . - 0 ID=cds-WP_060073427.1;Parent=gene-LDO49_RS32475;Dbxref=GenBank:WP_060073427.1;Name=WP_060073427.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS32475;product=DUF3592 domain-containing protein;protein_id=WP_060073427.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 72113 73057 . - . ID=gene-LDO49_RS32480;Name=LDO49_RS32480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32480;old_locus_tag=BCEP4_70085 NZ_CAJZAV010000279.1 Protein Homology CDS 72113 73057 . - 0 ID=cds-WP_060073429.1;Parent=gene-LDO49_RS32480;Dbxref=GenBank:WP_060073429.1;Name=WP_060073429.1;Ontology_term=GO:0006633,GO:0016717,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on paired donors%2C with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water|0016717||IEA,metal ion binding|0046872||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656064.1;locus_tag=LDO49_RS32480;product=fatty acid desaturase family protein;protein_id=WP_060073429.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 73057 73674 . - . ID=gene-LDO49_RS32485;Name=LDO49_RS32485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32485;old_locus_tag=BCEP4_70086 NZ_CAJZAV010000279.1 Protein Homology CDS 73057 73674 . - 0 ID=cds-WP_059590803.1;Parent=gene-LDO49_RS32485;Dbxref=GenBank:WP_059590803.1;Name=WP_059590803.1;Ontology_term=GO:0008610;gbkey=CDS;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656063.1;locus_tag=LDO49_RS32485;product=phosphatase PAP2 family protein;protein_id=WP_059590803.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 73671 74828 . - . ID=gene-LDO49_RS32490;Name=LDO49_RS32490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32490;old_locus_tag=BCEP4_70087 NZ_CAJZAV010000279.1 Protein Homology CDS 73671 74828 . - 0 ID=cds-WP_060073431.1;Parent=gene-LDO49_RS32490;Dbxref=GenBank:WP_060073431.1;Name=WP_060073431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351068.1;locus_tag=LDO49_RS32490;product=hypothetical protein;protein_id=WP_060073431.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 74825 75574 . - . ID=gene-LDO49_RS32495;Name=LDO49_RS32495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32495;old_locus_tag=BCEP4_70088 NZ_CAJZAV010000279.1 Protein Homology CDS 74825 75574 . - 0 ID=cds-WP_060073433.1;Parent=gene-LDO49_RS32495;Dbxref=GenBank:WP_060073433.1;Name=WP_060073433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351067.1;locus_tag=LDO49_RS32495;product=hypothetical protein;protein_id=WP_060073433.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 75571 75801 . - . ID=gene-LDO49_RS32500;Name=LDO49_RS32500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32500;old_locus_tag=BCEP4_70089 NZ_CAJZAV010000279.1 GeneMarkS-2+ CDS 75571 75801 . - 0 ID=cds-WP_060073435.1;Parent=gene-LDO49_RS32500;Dbxref=GenBank:WP_060073435.1;Name=WP_060073435.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS32500;product=hypothetical protein;protein_id=WP_060073435.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 75937 77001 . - . ID=gene-LDO49_RS32505;Name=LDO49_RS32505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32505;old_locus_tag=BCEP4_70090 NZ_CAJZAV010000279.1 Protein Homology CDS 75937 77001 . - 0 ID=cds-WP_060073437.1;Parent=gene-LDO49_RS32505;Dbxref=GenBank:WP_060073437.1;Name=WP_060073437.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333283.1;locus_tag=LDO49_RS32505;product=glycosyltransferase;protein_id=WP_060073437.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 77140 77583 . - . ID=gene-LDO49_RS32510;Name=yiaA;gbkey=Gene;gene=yiaA;gene_biotype=protein_coding;locus_tag=LDO49_RS32510;old_locus_tag=BCEP4_70091 NZ_CAJZAV010000279.1 Protein Homology CDS 77140 77583 . - 0 ID=cds-WP_027788274.1;Parent=gene-LDO49_RS32510;Dbxref=GenBank:WP_027788274.1;Name=WP_027788274.1;gbkey=CDS;gene=yiaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009968206.1;locus_tag=LDO49_RS32510;product=inner membrane protein YiaA;protein_id=WP_027788274.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 77686 78633 . - . ID=gene-LDO49_RS32515;Name=LDO49_RS32515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32515;old_locus_tag=BCEP4_70092 NZ_CAJZAV010000279.1 Protein Homology CDS 77686 78633 . - 0 ID=cds-WP_059709691.1;Parent=gene-LDO49_RS32515;Dbxref=GenBank:WP_059709691.1;Name=WP_059709691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476801.1;locus_tag=LDO49_RS32515;product=cupin domain-containing protein;protein_id=WP_059709691.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 78764 79093 . + . ID=gene-LDO49_RS32520;Name=LDO49_RS32520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32520;old_locus_tag=BCEP4_70093 NZ_CAJZAV010000279.1 Protein Homology CDS 78764 79093 . + 0 ID=cds-WP_006484989.1;Parent=gene-LDO49_RS32520;Dbxref=GenBank:WP_006484989.1;Name=WP_006484989.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883382.1;locus_tag=LDO49_RS32520;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_006484989.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 79308 80141 . + . ID=gene-LDO49_RS32525;Name=LDO49_RS32525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32525;old_locus_tag=BCEP4_70096 NZ_CAJZAV010000279.1 Protein Homology CDS 79308 80141 . + 0 ID=cds-WP_021157185.1;Parent=gene-LDO49_RS32525;Dbxref=GenBank:WP_021157185.1;Name=WP_021157185.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883381.1;locus_tag=LDO49_RS32525;product=class II glutamine amidotransferase;protein_id=WP_021157185.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 80916 81446 . + . ID=gene-LDO49_RS32530;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=LDO49_RS32530;old_locus_tag=BCEP4_70098 NZ_CAJZAV010000279.1 Protein Homology CDS 80916 81446 . + 0 ID=cds-WP_124475157.1;Parent=gene-LDO49_RS32530;Dbxref=GenBank:WP_124475157.1;Name=WP_124475157.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497462.1;locus_tag=LDO49_RS32530;product=adenylyl-sulfate kinase;protein_id=WP_124475157.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 81558 82238 . - . ID=gene-LDO49_RS32535;Name=LDO49_RS32535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32535;old_locus_tag=BCEP4_70099 NZ_CAJZAV010000279.1 Protein Homology CDS 81558 82238 . - 0 ID=cds-WP_059649568.1;Parent=gene-LDO49_RS32535;Dbxref=GenBank:WP_059649568.1;Name=WP_059649568.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327967.1;locus_tag=LDO49_RS32535;product=GNAT family N-acetyltransferase;protein_id=WP_059649568.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 82235 83563 . - . ID=gene-LDO49_RS32540;Name=LDO49_RS32540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32540;old_locus_tag=BCEP4_70100 NZ_CAJZAV010000279.1 Protein Homology CDS 82235 83563 . - 0 ID=cds-WP_224052729.1;Parent=gene-LDO49_RS32540;Dbxref=GenBank:WP_224052729.1;Name=WP_224052729.1;Ontology_term=GO:0016747,GO:0030170;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351059.1;locus_tag=LDO49_RS32540;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_224052729.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 83629 84546 . - . ID=gene-LDO49_RS32545;Name=LDO49_RS32545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32545;old_locus_tag=BCEP4_70101 NZ_CAJZAV010000279.1 Protein Homology CDS 83629 84546 . - 0 ID=cds-WP_021157189.1;Parent=gene-LDO49_RS32545;Dbxref=GenBank:WP_021157189.1;Name=WP_021157189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544253.1;locus_tag=LDO49_RS32545;product=UDP-3-O-acyl N-acetylglycosamine deacetylase;protein_id=WP_021157189.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 84543 92177 . - . ID=gene-LDO49_RS32550;Name=LDO49_RS32550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32550;old_locus_tag=BCEP4_70102 NZ_CAJZAV010000279.1 Protein Homology CDS 84543 92177 . - 0 ID=cds-WP_224052730.1;Parent=gene-LDO49_RS32550;Dbxref=GenBank:WP_224052730.1;Name=WP_224052730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484972.1;locus_tag=LDO49_RS32550;product=type I polyketide synthase;protein_id=WP_224052730.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 92181 93713 . - . ID=gene-LDO49_RS32555;Name=LDO49_RS32555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32555;old_locus_tag=BCEP4_70103 NZ_CAJZAV010000279.1 Protein Homology CDS 92181 93713 . - 0 ID=cds-WP_060073441.1;Parent=gene-LDO49_RS32555;Dbxref=GenBank:WP_060073441.1;Name=WP_060073441.1;Ontology_term=GO:0016772;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484922.1;locus_tag=LDO49_RS32555;product=LTA synthase family protein;protein_id=WP_060073441.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 93710 94501 . - . ID=gene-LDO49_RS32560;Name=LDO49_RS32560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32560;old_locus_tag=BCEP4_70104 NZ_CAJZAV010000279.1 Protein Homology CDS 93710 94501 . - 0 ID=cds-WP_060073443.1;Parent=gene-LDO49_RS32560;Dbxref=GenBank:WP_060073443.1;Name=WP_060073443.1;Ontology_term=GO:0016491,GO:0070401,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP+ binding|0070401||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009240833.1;locus_tag=LDO49_RS32560;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_060073443.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 94494 95699 . - . ID=gene-LDO49_RS32565;Name=LDO49_RS32565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32565;old_locus_tag=BCEP4_70105 NZ_CAJZAV010000279.1 Protein Homology CDS 94494 95699 . - 0 ID=cds-WP_060073445.1;Parent=gene-LDO49_RS32565;Dbxref=GenBank:WP_060073445.1;Name=WP_060073445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696753.1;locus_tag=LDO49_RS32565;product=capsule biosynthesis protein;protein_id=WP_060073445.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 95874 96209 . + . ID=gene-LDO49_RS32570;Name=LDO49_RS32570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32570;old_locus_tag=BCEP4_70106 NZ_CAJZAV010000279.1 GeneMarkS-2+ CDS 95874 96209 . + 0 ID=cds-WP_185633925.1;Parent=gene-LDO49_RS32570;Dbxref=GenBank:WP_185633925.1;Name=WP_185633925.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS32570;product=hypothetical protein;protein_id=WP_185633925.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 96328 97968 . + . ID=gene-LDO49_RS32575;Name=LDO49_RS32575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32575;old_locus_tag=BCEP4_70107 NZ_CAJZAV010000279.1 GeneMarkS-2+ CDS 96328 97968 . + 0 ID=cds-WP_060147667.1;Parent=gene-LDO49_RS32575;Dbxref=GenBank:WP_060147667.1;Name=WP_060147667.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS32575;product=glycosyl hydrolase family 28-related protein;protein_id=WP_060147667.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 98066 99187 . - . ID=gene-LDO49_RS32580;Name=LDO49_RS32580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32580;old_locus_tag=BCEP4_70108 NZ_CAJZAV010000279.1 GeneMarkS-2+ CDS 98066 99187 . - 0 ID=cds-WP_060073448.1;Parent=gene-LDO49_RS32580;Dbxref=GenBank:WP_060073448.1;Name=WP_060073448.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS32580;product=sulfotransferase family 2 domain-containing protein;protein_id=WP_060073448.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 99301 99948 . - . ID=gene-LDO49_RS32585;Name=LDO49_RS32585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32585;old_locus_tag=BCEP4_70109 NZ_CAJZAV010000279.1 Protein Homology CDS 99301 99948 . - 0 ID=cds-WP_060066229.1;Parent=gene-LDO49_RS32585;Dbxref=GenBank:WP_060066229.1;Name=WP_060066229.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194035.1;locus_tag=LDO49_RS32585;product=ABC transporter ATP-binding protein;protein_id=WP_060066229.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 99945 100742 . - . ID=gene-LDO49_RS32590;Name=LDO49_RS32590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32590;old_locus_tag=BCEP4_70110 NZ_CAJZAV010000279.1 Protein Homology CDS 99945 100742 . - 0 ID=cds-WP_224052731.1;Parent=gene-LDO49_RS32590;Dbxref=GenBank:WP_224052731.1;Name=WP_224052731.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696751.1;locus_tag=LDO49_RS32590;product=ABC transporter permease;protein_id=WP_224052731.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 100754 102859 . - . ID=gene-LDO49_RS32595;Name=LDO49_RS32595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32595;old_locus_tag=BCEP4_70111 NZ_CAJZAV010000279.1 GeneMarkS-2+ CDS 100754 102859 . - 0 ID=cds-WP_124475147.1;Parent=gene-LDO49_RS32595;Dbxref=GenBank:WP_124475147.1;Name=WP_124475147.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS32595;product=hypothetical protein;protein_id=WP_124475147.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 102902 104848 . - . ID=gene-LDO49_RS32600;Name=LDO49_RS32600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32600;old_locus_tag=BCEP4_70112 NZ_CAJZAV010000279.1 Protein Homology CDS 102902 104848 . - 0 ID=cds-WP_081067310.1;Parent=gene-LDO49_RS32600;Dbxref=GenBank:WP_081067310.1;Name=WP_081067310.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: protein motif:HMM:NF016464.6;locus_tag=LDO49_RS32600;product=glycosyltransferase family 61 protein;protein_id=WP_081067310.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 104959 106293 . - . ID=gene-LDO49_RS32605;Name=LDO49_RS32605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32605;old_locus_tag=BCEP4_70113 NZ_CAJZAV010000279.1 Protein Homology CDS 104959 106293 . - 0 ID=cds-WP_224052732.1;Parent=gene-LDO49_RS32605;Dbxref=GenBank:WP_224052732.1;Name=WP_224052732.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007736772.1;locus_tag=LDO49_RS32605;product=glycosyltransferase family 4 protein;protein_id=WP_224052732.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 106423 107349 . - . ID=gene-LDO49_RS32610;Name=LDO49_RS32610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32610;old_locus_tag=BCEP4_70114 NZ_CAJZAV010000279.1 Protein Homology CDS 106423 107349 . - 0 ID=cds-WP_063812022.1;Parent=gene-LDO49_RS32610;Dbxref=GenBank:WP_063812022.1;Name=WP_063812022.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF013530.6;locus_tag=LDO49_RS32610;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_063812022.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 107358 109298 . - . ID=gene-LDO49_RS32615;Name=LDO49_RS32615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32615;old_locus_tag=BCEP4_70115 NZ_CAJZAV010000279.1 Protein Homology CDS 107358 109298 . - 0 ID=cds-WP_124475146.1;Parent=gene-LDO49_RS32615;Dbxref=GenBank:WP_124475146.1;Name=WP_124475146.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024914.6;locus_tag=LDO49_RS32615;product=glycosyltransferase family protein;protein_id=WP_124475146.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 109513 110547 . - . ID=gene-LDO49_RS32620;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=LDO49_RS32620;old_locus_tag=BCEP4_70116 NZ_CAJZAV010000279.1 Protein Homology CDS 109513 110547 . - 0 ID=cds-WP_060073459.1;Parent=gene-LDO49_RS32620;Dbxref=GenBank:WP_060073459.1;Name=WP_060073459.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423198.1;locus_tag=LDO49_RS32620;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_060073459.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 110732 111904 . - . ID=gene-LDO49_RS32625;Name=LDO49_RS32625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32625;old_locus_tag=BCEP4_70117 NZ_CAJZAV010000279.1 Protein Homology CDS 110732 111904 . - 0 ID=cds-WP_060073461.1;Parent=gene-LDO49_RS32625;Dbxref=GenBank:WP_060073461.1;Name=WP_060073461.1;Ontology_term=GO:0000271,GO:0015774,GO:0015159;gbkey=CDS;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484977.1;locus_tag=LDO49_RS32625;product=polysaccharide biosynthesis/export family protein;protein_id=WP_060073461.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 112121 113272 . + . ID=gene-LDO49_RS32630;Name=LDO49_RS32630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32630;old_locus_tag=BCEP4_70118 NZ_CAJZAV010000279.1 Protein Homology CDS 112121 113272 . + 0 ID=cds-WP_060073463.1;Parent=gene-LDO49_RS32630;Dbxref=GenBank:WP_060073463.1;Name=WP_060073463.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484962.1;locus_tag=LDO49_RS32630;product=glycosyltransferase family 4 protein;protein_id=WP_060073463.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 113269 115284 . + . ID=gene-LDO49_RS32635;Name=LDO49_RS32635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32635;old_locus_tag=BCEP4_70119 NZ_CAJZAV010000279.1 Protein Homology CDS 113269 115284 . + 0 ID=cds-WP_224052733.1;Parent=gene-LDO49_RS32635;Dbxref=GenBank:WP_224052733.1;Name=WP_224052733.1;Ontology_term=GO:0000271,GO:0015774;gbkey=CDS;go_process=polysaccharide biosynthetic process|0000271||IEA,polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694162.1;locus_tag=LDO49_RS32635;product=capsular polysaccharide export protein%2C LipB/KpsS family;protein_id=WP_224052733.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 115403 116827 . + . ID=gene-LDO49_RS32640;Name=LDO49_RS32640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32640;old_locus_tag=BCEP4_70120 NZ_CAJZAV010000279.1 Protein Homology CDS 115403 116827 . + 0 ID=cds-WP_060073467.1;Parent=gene-LDO49_RS32640;Dbxref=GenBank:WP_060073467.1;Name=WP_060073467.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327950.1;locus_tag=LDO49_RS32640;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_060073467.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 117031 117843 . + . ID=gene-LDO49_RS32645;Name=LDO49_RS32645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32645;old_locus_tag=BCEP4_70121 NZ_CAJZAV010000279.1 Protein Homology CDS 117031 117843 . + 0 ID=cds-WP_021162199.1;Parent=gene-LDO49_RS32645;Dbxref=GenBank:WP_021162199.1;Name=WP_021162199.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406402.1;locus_tag=LDO49_RS32645;product=mechanosensitive ion channel family protein;protein_id=WP_021162199.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 117914 118597 . - . ID=gene-LDO49_RS32650;Name=LDO49_RS32650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32650;old_locus_tag=BCEP4_70122 NZ_CAJZAV010000279.1 Protein Homology CDS 117914 118597 . - 0 ID=cds-WP_021162200.1;Parent=gene-LDO49_RS32650;Dbxref=GenBank:WP_021162200.1;Name=WP_021162200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351038.1;locus_tag=LDO49_RS32650;product=DedA family protein;protein_id=WP_021162200.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 118781 120781 . + . ID=gene-LDO49_RS32655;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=LDO49_RS32655;old_locus_tag=BCEP4_70123 NZ_CAJZAV010000279.1 Protein Homology CDS 118781 120781 . + 0 ID=cds-WP_060073469.1;Parent=gene-LDO49_RS32655;Dbxref=GenBank:WP_060073469.1;Name=WP_060073469.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656051.1;locus_tag=LDO49_RS32655;product=DNA mismatch repair endonuclease MutL;protein_id=WP_060073469.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 120778 121752 . + . ID=gene-LDO49_RS32660;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=LDO49_RS32660;old_locus_tag=BCEP4_70124 NZ_CAJZAV010000279.1 Protein Homology CDS 120778 121752 . + 0 ID=cds-WP_048022345.1;Parent=gene-LDO49_RS32660;Dbxref=GenBank:WP_048022345.1;Name=WP_048022345.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363164.1;locus_tag=LDO49_RS32660;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_048022345.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 121756 122388 . - . ID=gene-LDO49_RS32665;Name=tetR;gbkey=Gene;gene=tetR;gene_biotype=protein_coding;locus_tag=LDO49_RS32665;old_locus_tag=BCEP4_70125 NZ_CAJZAV010000279.1 Protein Homology CDS 121756 122388 . - 0 ID=cds-WP_060073471.1;Parent=gene-LDO49_RS32665;Dbxref=GenBank:WP_060073471.1;Name=WP_060073471.1;gbkey=CDS;gene=tetR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544647.1;locus_tag=LDO49_RS32665;product=tetracycline resistance transcriptional repressor TetR;protein_id=WP_060073471.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 122452 123645 . + . ID=gene-LDO49_RS32670;Name=tet;gbkey=Gene;gene=tet;gene_biotype=protein_coding;locus_tag=LDO49_RS32670;old_locus_tag=BCEP4_70126 NZ_CAJZAV010000279.1 Protein Homology CDS 122452 123645 . + 0 ID=cds-WP_063812024.1;Parent=gene-LDO49_RS32670;Dbxref=GenBank:WP_063812024.1;Name=WP_063812024.1;Ontology_term=GO:0015904,GO:0008493;gbkey=CDS;gene=tet;go_function=tetracycline transmembrane transporter activity|0008493||IEA;go_process=tetracycline transmembrane transport|0015904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760486.1;locus_tag=LDO49_RS32670;product=Tet(A)/Tet(B)/Tet(C) family tetracycline efflux MFS transporter;protein_id=WP_063812024.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 123680 124075 . - . ID=gene-LDO49_RS32675;Name=LDO49_RS32675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32675;old_locus_tag=BCEP4_70127 NZ_CAJZAV010000279.1 Protein Homology CDS 123680 124075 . - 0 ID=cds-WP_027788306.1;Parent=gene-LDO49_RS32675;Dbxref=GenBank:WP_027788306.1;Name=WP_027788306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750667.1;locus_tag=LDO49_RS32675;product=YybH family protein;protein_id=WP_027788306.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 124187 125242 . - . ID=gene-LDO49_RS32680;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=LDO49_RS32680;old_locus_tag=BCEP4_70128 NZ_CAJZAV010000279.1 Protein Homology CDS 124187 125242 . - 0 ID=cds-WP_006484927.1;Parent=gene-LDO49_RS32680;Dbxref=GenBank:WP_006484927.1;Name=WP_006484927.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010116949.1;locus_tag=LDO49_RS32680;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_006484927.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 125493 126227 . + . ID=gene-LDO49_RS32685;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=LDO49_RS32685;old_locus_tag=BCEP4_70130 NZ_CAJZAV010000279.1 Protein Homology CDS 125493 126227 . + 0 ID=cds-WP_060073473.1;Parent=gene-LDO49_RS32685;Dbxref=GenBank:WP_060073473.1;Name=WP_060073473.1;Ontology_term=GO:0032297,GO:0016818;gbkey=CDS;gene=hda;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333268.1;locus_tag=LDO49_RS32685;product=DnaA regulatory inactivator Hda;protein_id=WP_060073473.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 126239 126916 . + . ID=gene-LDO49_RS32690;Name=LDO49_RS32690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32690;old_locus_tag=BCEP4_70129 NZ_CAJZAV010000279.1 Protein Homology CDS 126239 126916 . + 0 ID=cds-WP_021162206.1;Parent=gene-LDO49_RS32690;Dbxref=GenBank:WP_021162206.1;Name=WP_021162206.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401594.1;locus_tag=LDO49_RS32690;product=HAD family hydrolase;protein_id=WP_021162206.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 126922 128457 . + . ID=gene-LDO49_RS32695;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=LDO49_RS32695;old_locus_tag=BCEP4_70131 NZ_CAJZAV010000279.1 Protein Homology CDS 126922 128457 . + 0 ID=cds-WP_021162207.1;Parent=gene-LDO49_RS32695;Dbxref=GenBank:WP_021162207.1;Name=WP_021162207.1;Ontology_term=GO:0043633,GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;go_process=polyadenylation-dependent RNA catabolic process|0043633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214075.1;locus_tag=LDO49_RS32695;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_021162207.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 128493 129035 . + . ID=gene-LDO49_RS32700;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=LDO49_RS32700;old_locus_tag=BCEP4_70132 NZ_CAJZAV010000279.1 Protein Homology CDS 128493 129035 . + 0 ID=cds-WP_043189526.1;Parent=gene-LDO49_RS32700;Dbxref=GenBank:WP_043189526.1;Name=WP_043189526.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025371.1;locus_tag=LDO49_RS32700;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_043189526.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 129032 129718 . + . ID=gene-LDO49_RS32705;Name=LDO49_RS32705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32705;old_locus_tag=BCEP4_70133 NZ_CAJZAV010000279.1 Protein Homology CDS 129032 129718 . + 0 ID=cds-WP_027788310.1;Parent=gene-LDO49_RS32705;Dbxref=GenBank:WP_027788310.1;Name=WP_027788310.1;Ontology_term=GO:0006139,GO:0005524,GO:0019136;gbkey=CDS;go_function=ATP binding|0005524||IEA,deoxynucleoside kinase activity|0019136||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656042.1;locus_tag=LDO49_RS32705;product=deoxynucleoside kinase;protein_id=WP_027788310.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 129763 130578 . + . ID=gene-LDO49_RS32710;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=LDO49_RS32710;old_locus_tag=BCEP4_70134 NZ_CAJZAV010000279.1 Protein Homology CDS 129763 130578 . + 0 ID=cds-WP_059487156.1;Parent=gene-LDO49_RS32710;Dbxref=GenBank:WP_059487156.1;Name=WP_059487156.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351027.1;locus_tag=LDO49_RS32710;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_059487156.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 130767 131147 . + . ID=gene-LDO49_RS32715;Name=LDO49_RS32715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32715;old_locus_tag=BCEP4_70135 NZ_CAJZAV010000279.1 Protein Homology CDS 130767 131147 . + 0 ID=cds-WP_081067312.1;Parent=gene-LDO49_RS32715;Dbxref=GenBank:WP_081067312.1;Name=WP_081067312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363155.1;locus_tag=LDO49_RS32715;product=BPSL0067 family protein;protein_id=WP_081067312.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 131144 131593 . + . ID=gene-LDO49_RS32720;Name=LDO49_RS32720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32720;old_locus_tag=BCEP4_70136 NZ_CAJZAV010000279.1 Protein Homology CDS 131144 131593 . + 0 ID=cds-WP_048022338.1;Parent=gene-LDO49_RS32720;Dbxref=GenBank:WP_048022338.1;Name=WP_048022338.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042415.1;locus_tag=LDO49_RS32720;product=STY0301 family protein;protein_id=WP_048022338.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 131613 133565 . - . ID=gene-LDO49_RS32725;Name=LDO49_RS32725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32725;old_locus_tag=BCEP4_70137 NZ_CAJZAV010000279.1 Protein Homology CDS 131613 133565 . - 0 ID=cds-WP_060073477.1;Parent=gene-LDO49_RS32725;Dbxref=GenBank:WP_060073477.1;Name=WP_060073477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327942.1;locus_tag=LDO49_RS32725;product=chorismate-binding protein;protein_id=WP_060073477.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 133579 134715 . - . ID=gene-LDO49_RS32730;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=LDO49_RS32730;old_locus_tag=BCEP4_70138 NZ_CAJZAV010000279.1 Protein Homology CDS 133579 134715 . - 0 ID=cds-WP_021162212.1;Parent=gene-LDO49_RS32730;Dbxref=GenBank:WP_021162212.1;Name=WP_021162212.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417099.1;locus_tag=LDO49_RS32730;product=molecular chaperone DnaJ;protein_id=WP_021162212.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 134985 136937 . - . ID=gene-LDO49_RS32735;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=LDO49_RS32735;old_locus_tag=BCEP4_70139 NZ_CAJZAV010000279.1 Protein Homology CDS 134985 136937 . - 0 ID=cds-WP_021162213.1;Parent=gene-LDO49_RS32735;Dbxref=GenBank:WP_021162213.1;Name=WP_021162213.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012431797.1;locus_tag=LDO49_RS32735;product=molecular chaperone DnaK;protein_id=WP_021162213.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 137085 137495 . - . ID=gene-LDO49_RS32740;Name=LDO49_RS32740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32740;old_locus_tag=BCEP4_70140 NZ_CAJZAV010000279.1 Protein Homology CDS 137085 137495 . - 0 ID=cds-WP_059528987.1;Parent=gene-LDO49_RS32740;Dbxref=GenBank:WP_059528987.1;Name=WP_059528987.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214078.1;locus_tag=LDO49_RS32740;product=thioredoxin family protein;protein_id=WP_059528987.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 137506 138051 . - . ID=gene-LDO49_RS32745;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=LDO49_RS32745;old_locus_tag=BCEP4_70141 NZ_CAJZAV010000279.1 Protein Homology CDS 137506 138051 . - 0 ID=cds-WP_021162215.1;Parent=gene-LDO49_RS32745;Dbxref=GenBank:WP_021162215.1;Name=WP_021162215.1;Ontology_term=GO:0006457,GO:0000774,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194243.1;locus_tag=LDO49_RS32745;product=nucleotide exchange factor GrpE;protein_id=WP_021162215.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 138408 138569 . + . ID=gene-LDO49_RS32750;Name=LDO49_RS32750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32750 NZ_CAJZAV010000279.1 Protein Homology CDS 138408 138569 . + 0 ID=cds-WP_006476841.1;Parent=gene-LDO49_RS32750;Dbxref=GenBank:WP_006476841.1;Name=WP_006476841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194079.1;locus_tag=LDO49_RS32750;product=hypothetical protein;protein_id=WP_006476841.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 138541 138948 . - . ID=gene-LDO49_RS32755;Name=LDO49_RS32755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32755;old_locus_tag=BCEP4_70142 NZ_CAJZAV010000279.1 Protein Homology CDS 138541 138948 . - 0 ID=cds-WP_021162216.1;Parent=gene-LDO49_RS32755;Dbxref=GenBank:WP_021162216.1;Name=WP_021162216.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532194.1;locus_tag=LDO49_RS32755;product=RNA-binding S4 domain-containing protein;protein_id=WP_021162216.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 138945 140018 . - . ID=gene-LDO49_RS32760;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=LDO49_RS32760;old_locus_tag=BCEP4_70143 NZ_CAJZAV010000279.1 Protein Homology CDS 138945 140018 . - 0 ID=cds-WP_021162217.1;Parent=gene-LDO49_RS32760;Dbxref=GenBank:WP_021162217.1;Name=WP_021162217.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091440.1;locus_tag=LDO49_RS32760;product=ferrochelatase;protein_id=WP_021162217.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 140166 141188 . - . ID=gene-LDO49_RS32765;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=LDO49_RS32765;old_locus_tag=BCEP4_70144 NZ_CAJZAV010000279.1 Protein Homology CDS 140166 141188 . - 0 ID=cds-WP_021162218.1;Parent=gene-LDO49_RS32765;Dbxref=GenBank:WP_021162218.1;Name=WP_021162218.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752732.1;locus_tag=LDO49_RS32765;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_021162218.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 141320 142222 . + . ID=gene-LDO49_RS32770;Name=LDO49_RS32770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32770;old_locus_tag=BCEP4_70145 NZ_CAJZAV010000279.1 Protein Homology CDS 141320 142222 . + 0 ID=cds-WP_027788318.1;Parent=gene-LDO49_RS32770;Dbxref=GenBank:WP_027788318.1;Name=WP_027788318.1;Ontology_term=GO:0019674,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NAD+ metabolic process|0019674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883345.1;locus_tag=LDO49_RS32770;product=NAD kinase;protein_id=WP_027788318.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 142242 143891 . + . ID=gene-LDO49_RS32775;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=LDO49_RS32775;old_locus_tag=BCEP4_70146 NZ_CAJZAV010000279.1 Protein Homology CDS 142242 143891 . + 0 ID=cds-WP_219707377.1;Parent=gene-LDO49_RS32775;Dbxref=GenBank:WP_219707377.1;Name=WP_219707377.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889240.1;locus_tag=LDO49_RS32775;product=DNA repair protein RecN;protein_id=WP_219707377.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 144018 146822 . - . ID=gene-LDO49_RS32780;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=LDO49_RS32780;old_locus_tag=BCEP4_70147 NZ_CAJZAV010000279.1 Protein Homology CDS 144018 146822 . - 0 ID=cds-WP_060073484.1;Parent=gene-LDO49_RS32780;Dbxref=GenBank:WP_060073484.1;Name=WP_060073484.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497495.1;locus_tag=LDO49_RS32780;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_060073484.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 147054 151253 . + . ID=gene-LDO49_RS32785;Name=LDO49_RS32785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32785;old_locus_tag=BCEP4_70149 NZ_CAJZAV010000279.1 Protein Homology CDS 147054 151253 . + 0 ID=cds-WP_060073486.1;Parent=gene-LDO49_RS32785;Dbxref=GenBank:WP_060073486.1;Name=WP_060073486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752728.1;locus_tag=LDO49_RS32785;product=YhdP family protein;protein_id=WP_060073486.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 151317 152144 . + . ID=gene-LDO49_RS32790;Name=LDO49_RS32790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32790;old_locus_tag=BCEP4_70150 NZ_CAJZAV010000279.1 Protein Homology CDS 151317 152144 . + 0 ID=cds-WP_048022322.1;Parent=gene-LDO49_RS32790;Dbxref=GenBank:WP_048022322.1;Name=WP_048022322.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214082.1;locus_tag=LDO49_RS32790;product=carbon-nitrogen hydrolase family protein;protein_id=WP_048022322.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 152230 153696 . + . ID=gene-LDO49_RS32795;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=LDO49_RS32795;old_locus_tag=BCEP4_70151 NZ_CAJZAV010000279.1 Protein Homology CDS 152230 153696 . + 0 ID=cds-WP_021163847.1;Parent=gene-LDO49_RS32795;Dbxref=GenBank:WP_021163847.1;Name=WP_021163847.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012431786.1;locus_tag=LDO49_RS32795;product=metalloprotease TldD;protein_id=WP_021163847.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 154093 155166 . + . ID=gene-LDO49_RS32800;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=LDO49_RS32800;old_locus_tag=BCEP4_70152 NZ_CAJZAV010000279.1 Protein Homology CDS 154093 155166 . + 0 ID=cds-WP_027788323.1;Parent=gene-LDO49_RS32800;Dbxref=GenBank:WP_027788323.1;Name=WP_027788323.1;Ontology_term=GO:0009073,GO:0003849;gbkey=CDS;gene=aroG;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013587169.1;locus_tag=LDO49_RS32800;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_027788323.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 155290 155559 . + . ID=gene-LDO49_RS32805;Name=LDO49_RS32805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32805;old_locus_tag=BCEP4_70153 NZ_CAJZAV010000279.1 Protein Homology CDS 155290 155559 . + 0 ID=cds-WP_048022317.1;Parent=gene-LDO49_RS32805;Dbxref=GenBank:WP_048022317.1;Name=WP_048022317.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327935.1;locus_tag=LDO49_RS32805;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_048022317.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 155556 155945 . + . ID=gene-LDO49_RS32810;Name=LDO49_RS32810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32810;old_locus_tag=BCEP4_70154 NZ_CAJZAV010000279.1 Protein Homology CDS 155556 155945 . + 0 ID=cds-WP_060073488.1;Parent=gene-LDO49_RS32810;Dbxref=GenBank:WP_060073488.1;Name=WP_060073488.1;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333246.1;locus_tag=LDO49_RS32810;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_060073488.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 156021 157229 . - . ID=gene-LDO49_RS32815;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=LDO49_RS32815;old_locus_tag=BCEP4_70155 NZ_CAJZAV010000279.1 Protein Homology CDS 156021 157229 . - 0 ID=cds-WP_060073490.1;Parent=gene-LDO49_RS32815;Dbxref=GenBank:WP_060073490.1;Name=WP_060073490.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106227.1;locus_tag=LDO49_RS32815;product=NO-inducible flavohemoprotein;protein_id=WP_060073490.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 157336 157887 . - . ID=gene-LDO49_RS32820;Name=LDO49_RS32820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32820;old_locus_tag=BCEP4_70156 NZ_CAJZAV010000279.1 Protein Homology CDS 157336 157887 . - 0 ID=cds-WP_060073492.1;Parent=gene-LDO49_RS32820;Dbxref=GenBank:WP_060073492.1;Name=WP_060073492.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544630.1;locus_tag=LDO49_RS32820;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_060073492.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 158061 159470 . + . ID=gene-LDO49_RS32825;Name=LDO49_RS32825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32825;old_locus_tag=BCEP4_70157 NZ_CAJZAV010000279.1 Protein Homology CDS 158061 159470 . + 0 ID=cds-WP_027788326.1;Parent=gene-LDO49_RS32825;Dbxref=GenBank:WP_027788326.1;Name=WP_027788326.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656021.1;locus_tag=LDO49_RS32825;product=FAD-binding oxidoreductase;protein_id=WP_027788326.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 159512 161005 . + . ID=gene-LDO49_RS32830;Name=LDO49_RS32830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32830;old_locus_tag=BCEP4_70158 NZ_CAJZAV010000279.1 Protein Homology CDS 159512 161005 . + 0 ID=cds-WP_021163857.1;Parent=gene-LDO49_RS32830;Dbxref=GenBank:WP_021163857.1;Name=WP_021163857.1;Ontology_term=GO:0003824,GO:0050660;gbkey=CDS;go_function=catalytic activity|0003824||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009913510.1;locus_tag=LDO49_RS32830;product=FAD-linked oxidase C-terminal domain-containing protein;protein_id=WP_021163857.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 161178 162266 . + . ID=gene-LDO49_RS32835;Name=glcE;gbkey=Gene;gene=glcE;gene_biotype=protein_coding;locus_tag=LDO49_RS32835;old_locus_tag=BCEP4_70159 NZ_CAJZAV010000279.1 Protein Homology CDS 161178 162266 . + 0 ID=cds-WP_021163858.1;Parent=gene-LDO49_RS32835;Dbxref=GenBank:WP_021163858.1;Name=WP_021163858.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=glcE;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333241.1;locus_tag=LDO49_RS32835;product=glycolate oxidase subunit GlcE;protein_id=WP_021163858.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 162552 163778 . + . ID=gene-LDO49_RS32840;Name=glcF;gbkey=Gene;gene=glcF;gene_biotype=protein_coding;locus_tag=LDO49_RS32840;old_locus_tag=BCEP4_70161 NZ_CAJZAV010000279.1 Protein Homology CDS 162552 163778 . + 0 ID=cds-WP_021163859.1;Parent=gene-LDO49_RS32840;Dbxref=GenBank:WP_021163859.1;Name=WP_021163859.1;Ontology_term=GO:0051536;gbkey=CDS;gene=glcF;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194146.1;locus_tag=LDO49_RS32840;product=glycolate oxidase subunit GlcF;protein_id=WP_021163859.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 163910 164608 . + . ID=gene-LDO49_RS32845;Name=LDO49_RS32845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32845;old_locus_tag=BCEP4_70160 NZ_CAJZAV010000279.1 Protein Homology CDS 163910 164608 . + 0 ID=cds-WP_060073524.1;Parent=gene-LDO49_RS32845;Dbxref=GenBank:WP_060073524.1;Name=WP_060073524.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363137.1;locus_tag=LDO49_RS32845;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_060073524.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 164660 165472 . + . ID=gene-LDO49_RS32850;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=LDO49_RS32850;old_locus_tag=BCEP4_70162 NZ_CAJZAV010000279.1 Protein Homology CDS 164660 165472 . + 0 ID=cds-WP_060073494.1;Parent=gene-LDO49_RS32850;Dbxref=GenBank:WP_060073494.1;Name=WP_060073494.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004550016.1;locus_tag=LDO49_RS32850;product=pyrroline-5-carboxylate reductase;protein_id=WP_060073494.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 165582 166454 . - . ID=gene-LDO49_RS32855;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=LDO49_RS32855;old_locus_tag=BCEP4_70163 NZ_CAJZAV010000279.1 Protein Homology CDS 165582 166454 . - 0 ID=cds-WP_048022305.1;Parent=gene-LDO49_RS32855;Dbxref=GenBank:WP_048022305.1;Name=WP_048022305.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656015.1;locus_tag=LDO49_RS32855;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_048022305.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq pseudogene 166663 166871 . - . ID=gene-LDO49_RS32860;Name=LDO49_RS32860;end_range=166871,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS32860;partial=true;pseudo=true NZ_CAJZAV010000279.1 Protein Homology CDS 166663 166871 . - 0 ID=cds-LDO49_RS32860;Parent=gene-LDO49_RS32860;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=166871,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656014.1;locus_tag=LDO49_RS32860;partial=true;product=DNA starvation/stationary phase protection protein;pseudo=true;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 166900 167748 . - . ID=gene-LDO49_RS32865;Name=LDO49_RS32865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32865;old_locus_tag=BCEP4_70165 NZ_CAJZAV010000279.1 Protein Homology CDS 166900 167748 . - 0 ID=cds-WP_308044133.1;Parent=gene-LDO49_RS32865;Dbxref=GenBank:WP_308044133.1;Name=WP_308044133.1;Ontology_term=GO:0006508,GO:0004180,GO:0008236,GO:0016787;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA,serine-type peptidase activity|0008236||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349779.1;locus_tag=LDO49_RS32865;product=S66 peptidase family protein;protein_id=WP_308044133.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 167910 168158 . + . ID=gene-LDO49_RS32870;Name=LDO49_RS32870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32870 NZ_CAJZAV010000279.1 GeneMarkS-2+ CDS 167910 168158 . + 0 ID=cds-WP_185633928.1;Parent=gene-LDO49_RS32870;Dbxref=GenBank:WP_185633928.1;Name=WP_185633928.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS32870;product=hypothetical protein;protein_id=WP_185633928.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 168192 168491 . + . ID=gene-LDO49_RS32875;Name=LDO49_RS32875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32875;old_locus_tag=BCEP4_70167 NZ_CAJZAV010000279.1 Protein Homology CDS 168192 168491 . + 0 ID=cds-WP_081067313.1;Parent=gene-LDO49_RS32875;Dbxref=GenBank:WP_081067313.1;Name=WP_081067313.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.6;locus_tag=LDO49_RS32875;product=transposase;protein_id=WP_081067313.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 168527 168682 . - . ID=gene-LDO49_RS32880;Name=LDO49_RS32880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32880;old_locus_tag=BCEP4_70168 NZ_CAJZAV010000279.1 Protein Homology CDS 168527 168682 . - 0 ID=cds-WP_185633923.1;Parent=gene-LDO49_RS32880;Dbxref=GenBank:WP_185633923.1;Name=WP_185633923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898033.1;locus_tag=LDO49_RS32880;product=hypothetical protein;protein_id=WP_185633923.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 168785 170971 . - . ID=gene-LDO49_RS32885;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=LDO49_RS32885;old_locus_tag=BCEP4_70169 NZ_CAJZAV010000279.1 Protein Homology CDS 168785 170971 . - 0 ID=cds-WP_059487130.1;Parent=gene-LDO49_RS32885;Dbxref=GenBank:WP_059487130.1;Name=WP_059487130.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327929.1;locus_tag=LDO49_RS32885;product=catalase/peroxidase HPI;protein_id=WP_059487130.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 171615 172574 . - . ID=gene-LDO49_RS32890;Name=LDO49_RS32890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32890;old_locus_tag=BCEP4_70171 NZ_CAJZAV010000279.1 Protein Homology CDS 171615 172574 . - 0 ID=cds-WP_021163869.1;Parent=gene-LDO49_RS32890;Dbxref=GenBank:WP_021163869.1;Name=WP_021163869.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333233.1;locus_tag=LDO49_RS32890;product=hydrogen peroxide-inducible genes activator;protein_id=WP_021163869.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 172699 175023 . - . ID=gene-LDO49_RS32895;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=LDO49_RS32895;old_locus_tag=BCEP4_70172 NZ_CAJZAV010000279.1 Protein Homology CDS 172699 175023 . - 0 ID=cds-WP_060073500.1;Parent=gene-LDO49_RS32895;Dbxref=GenBank:WP_060073500.1;Name=WP_060073500.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678;gbkey=CDS;gene=recG;go_function=DNA helicase activity|0003678||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408353.1;locus_tag=LDO49_RS32895;product=ATP-dependent DNA helicase RecG;protein_id=WP_060073500.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 175191 176258 . + . ID=gene-LDO49_RS32900;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=LDO49_RS32900;old_locus_tag=BCEP4_70173 NZ_CAJZAV010000279.1 Protein Homology CDS 175191 176258 . + 0 ID=cds-WP_059620925.1;Parent=gene-LDO49_RS32900;Dbxref=GenBank:WP_059620925.1;Name=WP_059620925.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476866.1;locus_tag=LDO49_RS32900;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_059620925.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 176493 177698 . + . ID=gene-LDO49_RS32905;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=LDO49_RS32905;old_locus_tag=BCEP4_70174 NZ_CAJZAV010000279.1 Protein Homology CDS 176493 177698 . + 0 ID=cds-WP_059487125.1;Parent=gene-LDO49_RS32905;Dbxref=GenBank:WP_059487125.1;Name=WP_059487125.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363129.1;locus_tag=LDO49_RS32905;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_059487125.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 177932 178255 . + . ID=gene-LDO49_RS32910;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=LDO49_RS32910;old_locus_tag=BCEP4_70175 NZ_CAJZAV010000279.1 Protein Homology CDS 177932 178255 . + 0 ID=cds-WP_006476868.1;Parent=gene-LDO49_RS32910;Dbxref=GenBank:WP_006476868.1;Name=WP_006476868.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014190436.1;locus_tag=LDO49_RS32910;product=preprotein translocase subunit YajC;protein_id=WP_006476868.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 178362 180383 . + . ID=gene-LDO49_RS32915;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=LDO49_RS32915;old_locus_tag=BCEP4_70176 NZ_CAJZAV010000279.1 Protein Homology CDS 178362 180383 . + 0 ID=cds-WP_021163786.1;Parent=gene-LDO49_RS32915;Dbxref=GenBank:WP_021163786.1;Name=WP_021163786.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363128.1;locus_tag=LDO49_RS32915;product=protein translocase subunit SecD;protein_id=WP_021163786.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 180400 181350 . + . ID=gene-LDO49_RS32920;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=LDO49_RS32920;old_locus_tag=BCEP4_70177 NZ_CAJZAV010000279.1 Protein Homology CDS 180400 181350 . + 0 ID=cds-WP_021163787.1;Parent=gene-LDO49_RS32920;Dbxref=GenBank:WP_021163787.1;Name=WP_021163787.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852175.1;locus_tag=LDO49_RS32920;product=protein translocase subunit SecF;protein_id=WP_021163787.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 181567 183129 . + . ID=gene-LDO49_RS32925;Name=LDO49_RS32925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32925;old_locus_tag=BCEP4_70179 NZ_CAJZAV010000279.1 Protein Homology CDS 181567 183129 . + 0 ID=cds-WP_185633922.1;Parent=gene-LDO49_RS32925;Dbxref=GenBank:WP_185633922.1;Name=WP_185633922.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350994.1;locus_tag=LDO49_RS32925;product=S41 family peptidase;protein_id=WP_185633922.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 183149 184426 . - . ID=gene-LDO49_RS32930;Name=LDO49_RS32930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32930;old_locus_tag=BCEP4_70180 NZ_CAJZAV010000279.1 Protein Homology CDS 183149 184426 . - 0 ID=cds-WP_048024169.1;Parent=gene-LDO49_RS32930;Dbxref=GenBank:WP_048024169.1;Name=WP_048024169.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760287.1;locus_tag=LDO49_RS32930;product=MFS transporter;protein_id=WP_048024169.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 184626 185207 . - . ID=gene-LDO49_RS32935;Name=LDO49_RS32935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32935;old_locus_tag=BCEP4_70181 NZ_CAJZAV010000279.1 Protein Homology CDS 184626 185207 . - 0 ID=cds-WP_021156367.1;Parent=gene-LDO49_RS32935;Dbxref=GenBank:WP_021156367.1;Name=WP_021156367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760288.1;locus_tag=LDO49_RS32935;product=YceI family protein;protein_id=WP_021156367.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 185272 185832 . - . ID=gene-LDO49_RS32940;Name=LDO49_RS32940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32940;old_locus_tag=BCEP4_70182 NZ_CAJZAV010000279.1 Protein Homology CDS 185272 185832 . - 0 ID=cds-WP_042972699.1;Parent=gene-LDO49_RS32940;Dbxref=GenBank:WP_042972699.1;Name=WP_042972699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106308.1;locus_tag=LDO49_RS32940;product=YceI family protein;protein_id=WP_042972699.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 185841 186401 . - . ID=gene-LDO49_RS32945;Name=LDO49_RS32945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32945;old_locus_tag=BCEP4_70183 NZ_CAJZAV010000279.1 Protein Homology CDS 185841 186401 . - 0 ID=cds-WP_021156369.1;Parent=gene-LDO49_RS32945;Dbxref=GenBank:WP_021156369.1;Name=WP_021156369.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602248.1;locus_tag=LDO49_RS32945;product=cytochrome b;protein_id=WP_021156369.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 186660 187322 . + . ID=gene-LDO49_RS32950;Name=LDO49_RS32950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32950;old_locus_tag=BCEP4_70185 NZ_CAJZAV010000279.1 Protein Homology CDS 186660 187322 . + 0 ID=cds-WP_060073502.1;Parent=gene-LDO49_RS32950;Dbxref=GenBank:WP_060073502.1;Name=WP_060073502.1;Ontology_term=GO:0006950,GO:0061024,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=response to stress|0006950||IEA,membrane organization|0061024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327922.1;locus_tag=LDO49_RS32950;product=paraquat-inducible protein A;protein_id=WP_060073502.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 187319 187948 . + . ID=gene-LDO49_RS32955;Name=LDO49_RS32955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32955;old_locus_tag=BCEP4_70184 NZ_CAJZAV010000279.1 Protein Homology CDS 187319 187948 . + 0 ID=cds-WP_021156371.1;Parent=gene-LDO49_RS32955;Dbxref=GenBank:WP_021156371.1;Name=WP_021156371.1;Ontology_term=GO:0006950,GO:0061024,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=response to stress|0006950||IEA,membrane organization|0061024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883309.1;locus_tag=LDO49_RS32955;product=paraquat-inducible protein A;protein_id=WP_021156371.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 187941 189560 . + . ID=gene-LDO49_RS32960;Name=LDO49_RS32960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32960;old_locus_tag=BCEP4_70186 NZ_CAJZAV010000279.1 Protein Homology CDS 187941 189560 . + 0 ID=cds-WP_059860551.1;Parent=gene-LDO49_RS32960;Dbxref=GenBank:WP_059860551.1;Name=WP_059860551.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883308.1;locus_tag=LDO49_RS32960;product=PqiB family protein;protein_id=WP_059860551.1;transl_table=11 NZ_CAJZAV010000279.1 RefSeq gene 189557 189849 . + . ID=gene-LDO49_RS32965;Name=LDO49_RS32965;end_range=189849,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32965;partial=true NZ_CAJZAV010000279.1 Protein Homology CDS 189557 189849 . + 0 ID=cds-WP_224052734.1;Parent=gene-LDO49_RS32965;Dbxref=GenBank:WP_224052734.1;Name=WP_224052734.1;Ontology_term=GO:0016020;end_range=189849,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760294.1;locus_tag=LDO49_RS32965;partial=true;product=PqiC family protein;protein_id=WP_224052734.1;transl_table=11 ##sequence-region NZ_CAJZAV010000280.1 1 52344 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000280.1 RefSeq region 1 52344 . + . ID=NZ_CAJZAV010000280.1:1..52344;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_70 NZ_CAJZAV010000280.1 RefSeq gene 259 591 . - . ID=gene-LDO49_RS32970;Name=LDO49_RS32970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32970;old_locus_tag=BCEP4_700001 NZ_CAJZAV010000280.1 Protein Homology CDS 259 591 . - 0 ID=cds-WP_224052736.1;Parent=gene-LDO49_RS32970;Dbxref=GenBank:WP_224052736.1;Name=WP_224052736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750124.1;locus_tag=LDO49_RS32970;product=hypothetical protein;protein_id=WP_224052736.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 680 1069 . - . ID=gene-LDO49_RS32975;Name=LDO49_RS32975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32975;old_locus_tag=BCEP4_700002 NZ_CAJZAV010000280.1 Protein Homology CDS 680 1069 . - 0 ID=cds-WP_059650083.1;Parent=gene-LDO49_RS32975;Dbxref=GenBank:WP_059650083.1;Name=WP_059650083.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024049.1;locus_tag=LDO49_RS32975;product=helix-turn-helix domain-containing protein;protein_id=WP_059650083.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 1301 1852 . + . ID=gene-LDO49_RS32980;Name=LDO49_RS32980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32980;old_locus_tag=BCEP4_700003 NZ_CAJZAV010000280.1 Protein Homology CDS 1301 1852 . + 0 ID=cds-WP_224052737.1;Parent=gene-LDO49_RS32980;Dbxref=GenBank:WP_224052737.1;Name=WP_224052737.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017315.6;locus_tag=LDO49_RS32980;product=PAAR domain-containing protein;protein_id=WP_224052737.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 1849 2745 . + . ID=gene-LDO49_RS32985;Name=LDO49_RS32985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32985;old_locus_tag=BCEP4_700004 NZ_CAJZAV010000280.1 Protein Homology CDS 1849 2745 . + 0 ID=cds-WP_146255035.1;Parent=gene-LDO49_RS32985;Dbxref=GenBank:WP_146255035.1;Name=WP_146255035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013591188.1;locus_tag=LDO49_RS32985;product=glycine zipper family protein;protein_id=WP_146255035.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 2742 3479 . + . ID=gene-LDO49_RS32990;Name=LDO49_RS32990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32990;old_locus_tag=BCEP4_700005 NZ_CAJZAV010000280.1 GeneMarkS-2+ CDS 2742 3479 . + 0 ID=cds-WP_224052738.1;Parent=gene-LDO49_RS32990;Dbxref=GenBank:WP_224052738.1;Name=WP_224052738.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS32990;product=hypothetical protein;protein_id=WP_224052738.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 3537 6143 . - . ID=gene-LDO49_RS32995;Name=LDO49_RS32995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS32995;old_locus_tag=BCEP4_700006 NZ_CAJZAV010000280.1 Protein Homology CDS 3537 6143 . - 0 ID=cds-WP_224052739.1;Parent=gene-LDO49_RS32995;Dbxref=GenBank:WP_224052739.1;Name=WP_224052739.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: protein motif:HMM:NF015102.6;locus_tag=LDO49_RS32995;product=DNA-directed RNA polymerase subunit alpha C-terminal domain-containing protein;protein_id=WP_224052739.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 6156 6536 . - . ID=gene-LDO49_RS33000;Name=LDO49_RS33000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33000;old_locus_tag=BCEP4_700007 NZ_CAJZAV010000280.1 GeneMarkS-2+ CDS 6156 6536 . - 0 ID=cds-WP_224052740.1;Parent=gene-LDO49_RS33000;Dbxref=GenBank:WP_224052740.1;Name=WP_224052740.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS33000;product=hypothetical protein;protein_id=WP_224052740.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 6533 8518 . - . ID=gene-LDO49_RS33005;Name=LDO49_RS33005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33005;old_locus_tag=BCEP4_700008 NZ_CAJZAV010000280.1 Protein Homology CDS 6533 8518 . - 0 ID=cds-WP_224052741.1;Parent=gene-LDO49_RS33005;Dbxref=GenBank:WP_224052741.1;Name=WP_224052741.1;Ontology_term=GO:0006302,GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;go_process=double-strand break repair|0006302||IEA;inference=COORDINATES: protein motif:HMM:NF024867.6;locus_tag=LDO49_RS33005;product=AAA family ATPase;protein_id=WP_224052741.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 8515 8733 . - . ID=gene-LDO49_RS33010;Name=LDO49_RS33010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33010 NZ_CAJZAV010000280.1 GeneMarkS-2+ CDS 8515 8733 . - 0 ID=cds-WP_224052742.1;Parent=gene-LDO49_RS33010;Dbxref=GenBank:WP_224052742.1;Name=WP_224052742.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS33010;product=hypothetical protein;protein_id=WP_224052742.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 8730 10829 . - . ID=gene-LDO49_RS33015;Name=LDO49_RS33015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33015;old_locus_tag=BCEP4_700010 NZ_CAJZAV010000280.1 Protein Homology CDS 8730 10829 . - 0 ID=cds-WP_224052743.1;Parent=gene-LDO49_RS33015;Dbxref=GenBank:WP_224052743.1;Name=WP_224052743.1;Ontology_term=GO:0003677,GO:0005524,GO:0016787;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF016724.6;locus_tag=LDO49_RS33015;product=DEAD/DEAH box helicase family protein;protein_id=WP_224052743.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 11088 12074 . - . ID=gene-LDO49_RS33020;Name=LDO49_RS33020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33020;old_locus_tag=BCEP4_700013 NZ_CAJZAV010000280.1 Protein Homology CDS 11088 12074 . - 0 ID=cds-WP_224052744.1;Parent=gene-LDO49_RS33020;Dbxref=GenBank:WP_224052744.1;Name=WP_224052744.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013704.7;locus_tag=LDO49_RS33020;product=DNA-methyltransferase;protein_id=WP_224052744.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 12705 15179 . - . ID=gene-LDO49_RS33025;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=LDO49_RS33025;old_locus_tag=BCEP4_700015 NZ_CAJZAV010000280.1 Protein Homology CDS 12705 15179 . - 0 ID=cds-WP_224052745.1;Parent=gene-LDO49_RS33025;Dbxref=GenBank:WP_224052745.1;Name=WP_224052745.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906825.1;locus_tag=LDO49_RS33025;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_224052745.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 15373 16479 . - . ID=gene-LDO49_RS33030;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=LDO49_RS33030;old_locus_tag=BCEP4_700016 NZ_CAJZAV010000280.1 Protein Homology CDS 15373 16479 . - 0 ID=cds-WP_006756934.1;Parent=gene-LDO49_RS33030;Dbxref=GenBank:WP_006756934.1;Name=WP_006756934.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906826.1;locus_tag=LDO49_RS33030;product=DNA polymerase III subunit beta;protein_id=WP_006756934.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 16648 18231 . - . ID=gene-LDO49_RS33035;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=LDO49_RS33035;old_locus_tag=BCEP4_700017 NZ_CAJZAV010000280.1 Protein Homology CDS 16648 18231 . - 0 ID=cds-WP_059487903.1;Parent=gene-LDO49_RS33035;Dbxref=GenBank:WP_059487903.1;Name=WP_059487903.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401751.1;locus_tag=LDO49_RS33035;product=chromosomal replication initiator protein DnaA;protein_id=WP_059487903.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 18653 18787 . + . ID=gene-LDO49_RS33040;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=LDO49_RS33040;old_locus_tag=BCEP4_700018 NZ_CAJZAV010000280.1 Protein Homology CDS 18653 18787 . + 0 ID=cds-WP_004198824.1;Parent=gene-LDO49_RS33040;Dbxref=GenBank:WP_004198824.1;Name=WP_004198824.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003816025.1;locus_tag=LDO49_RS33040;product=50S ribosomal protein L34;protein_id=WP_004198824.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 18803 19264 . + . ID=gene-LDO49_RS33045;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=LDO49_RS33045;old_locus_tag=BCEP4_700019 NZ_CAJZAV010000280.1 Protein Homology CDS 18803 19264 . + 0 ID=cds-WP_021157986.1;Parent=gene-LDO49_RS33045;Dbxref=GenBank:WP_021157986.1;Name=WP_021157986.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658267.1;locus_tag=LDO49_RS33045;product=ribonuclease P protein component;protein_id=WP_021157986.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 19340 19606 . + . ID=gene-LDO49_RS33050;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=LDO49_RS33050;old_locus_tag=BCEP4_700021 NZ_CAJZAV010000280.1 Protein Homology CDS 19340 19606 . + 0 ID=cds-WP_006750110.1;Parent=gene-LDO49_RS33050;Dbxref=GenBank:WP_006750110.1;Name=WP_006750110.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489939.1;locus_tag=LDO49_RS33050;product=membrane protein insertion efficiency factor YidD;protein_id=WP_006750110.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 19615 21279 . + . ID=gene-LDO49_RS33055;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=LDO49_RS33055;old_locus_tag=BCEP4_700022 NZ_CAJZAV010000280.1 Protein Homology CDS 19615 21279 . + 0 ID=cds-WP_027788804.1;Parent=gene-LDO49_RS33055;Dbxref=GenBank:WP_027788804.1;Name=WP_027788804.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546513.1;locus_tag=LDO49_RS33055;product=membrane protein insertase YidC;protein_id=WP_027788804.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 21382 21813 . - . ID=gene-LDO49_RS33060;Name=LDO49_RS33060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33060;old_locus_tag=BCEP4_700023 NZ_CAJZAV010000280.1 Protein Homology CDS 21382 21813 . - 0 ID=cds-WP_021157984.1;Parent=gene-LDO49_RS33060;Dbxref=GenBank:WP_021157984.1;Name=WP_021157984.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401756.1;locus_tag=LDO49_RS33060;product=helix-turn-helix domain-containing protein;protein_id=WP_021157984.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 22150 23544 . + . ID=gene-LDO49_RS33065;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=LDO49_RS33065;old_locus_tag=BCEP4_700025 NZ_CAJZAV010000280.1 Protein Homology CDS 22150 23544 . + 0 ID=cds-WP_027788805.1;Parent=gene-LDO49_RS33065;Dbxref=GenBank:WP_027788805.1;Name=WP_027788805.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041491300.1;locus_tag=LDO49_RS33065;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_027788805.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 23716 24429 . + . ID=gene-LDO49_RS33070;Name=LDO49_RS33070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33070;old_locus_tag=BCEP4_700026 NZ_CAJZAV010000280.1 GeneMarkS-2+ CDS 23716 24429 . + 0 ID=cds-WP_224052746.1;Parent=gene-LDO49_RS33070;Dbxref=GenBank:WP_224052746.1;Name=WP_224052746.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS33070;product=hypothetical protein;protein_id=WP_224052746.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 24529 25224 . + . ID=gene-LDO49_RS33075;Name=LDO49_RS33075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33075;old_locus_tag=BCEP4_700027 NZ_CAJZAV010000280.1 Protein Homology CDS 24529 25224 . + 0 ID=cds-WP_224052747.1;Parent=gene-LDO49_RS33075;Dbxref=GenBank:WP_224052747.1;Name=WP_224052747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353611.1;locus_tag=LDO49_RS33075;product=hypothetical protein;protein_id=WP_224052747.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 25268 25390 . - . ID=gene-LDO49_RS37355;Name=LDO49_RS37355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37355;old_locus_tag=BCEP4_700028 NZ_CAJZAV010000280.1 Protein Homology CDS 25268 25390 . - 0 ID=cds-WP_021157980.1;Parent=gene-LDO49_RS37355;Dbxref=GenBank:WP_021157980.1;Name=WP_021157980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750105.1;locus_tag=LDO49_RS37355;product=hypothetical protein;protein_id=WP_021157980.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 25541 26899 . - . ID=gene-LDO49_RS33080;Name=LDO49_RS33080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33080;old_locus_tag=BCEP4_700029 NZ_CAJZAV010000280.1 Protein Homology CDS 25541 26899 . - 0 ID=cds-WP_059675677.1;Parent=gene-LDO49_RS33080;Dbxref=GenBank:WP_059675677.1;Name=WP_059675677.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498694.1;locus_tag=LDO49_RS33080;product=GGDEF domain-containing protein;protein_id=WP_059675677.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 27010 27258 . - . ID=gene-LDO49_RS33085;Name=LDO49_RS33085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33085;old_locus_tag=BCEP4_700031 NZ_CAJZAV010000280.1 Protein Homology CDS 27010 27258 . - 0 ID=cds-WP_059619510.1;Parent=gene-LDO49_RS33085;Dbxref=GenBank:WP_059619510.1;Name=WP_059619510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489924.1;locus_tag=LDO49_RS33085;product=DUF2795 domain-containing protein;protein_id=WP_059619510.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 27406 27576 . - . ID=gene-LDO49_RS33090;Name=LDO49_RS33090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33090;old_locus_tag=BCEP4_700032 NZ_CAJZAV010000280.1 Protein Homology CDS 27406 27576 . - 0 ID=cds-WP_039364617.1;Parent=gene-LDO49_RS33090;Dbxref=GenBank:WP_039364617.1;Name=WP_039364617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010113186.1;locus_tag=LDO49_RS33090;product=hypothetical protein;protein_id=WP_039364617.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 27715 28272 . + . ID=gene-LDO49_RS33095;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=LDO49_RS33095;old_locus_tag=BCEP4_700030 NZ_CAJZAV010000280.1 Protein Homology CDS 27715 28272 . + 0 ID=cds-WP_042973815.1;Parent=gene-LDO49_RS33095;Dbxref=GenBank:WP_042973815.1;Name=WP_042973815.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353608.1;locus_tag=LDO49_RS33095;product=spermidine N1-acetyltransferase;protein_id=WP_042973815.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 28761 29108 . + . ID=gene-LDO49_RS33100;Name=sap1;gbkey=Gene;gene=sap1;gene_biotype=protein_coding;locus_tag=LDO49_RS33100;old_locus_tag=BCEP4_700034 NZ_CAJZAV010000280.1 Protein Homology CDS 28761 29108 . + 0 ID=cds-WP_021157977.1;Parent=gene-LDO49_RS33100;Dbxref=GenBank:WP_021157977.1;Name=WP_021157977.1;gbkey=CDS;gene=sap1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525830.1;locus_tag=LDO49_RS33100;product=surface attachment protein Sap1;protein_id=WP_021157977.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 29308 29862 . + . ID=gene-LDO49_RS33105;Name=LDO49_RS33105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33105;old_locus_tag=BCEP4_700035 NZ_CAJZAV010000280.1 Protein Homology CDS 29308 29862 . + 0 ID=cds-WP_124475826.1;Parent=gene-LDO49_RS33105;Dbxref=GenBank:WP_124475826.1;Name=WP_124475826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908298.1;locus_tag=LDO49_RS33105;product=YaeQ family protein;protein_id=WP_124475826.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 29884 30297 . - . ID=gene-LDO49_RS33110;Name=LDO49_RS33110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33110;old_locus_tag=BCEP4_700036 NZ_CAJZAV010000280.1 Protein Homology CDS 29884 30297 . - 0 ID=cds-WP_059487915.1;Parent=gene-LDO49_RS33110;Dbxref=GenBank:WP_059487915.1;Name=WP_059487915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214381.1;locus_tag=LDO49_RS33110;product=VOC family protein;protein_id=WP_059487915.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 30729 31820 . + . ID=gene-LDO49_RS33115;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=LDO49_RS33115;old_locus_tag=BCEP4_700038 NZ_CAJZAV010000280.1 Protein Homology CDS 30729 31820 . + 0 ID=cds-WP_048025603.1;Parent=gene-LDO49_RS33115;Dbxref=GenBank:WP_048025603.1;Name=WP_048025603.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214380.1;locus_tag=LDO49_RS33115;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_048025603.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq pseudogene 31817 32775 . + . ID=gene-LDO49_RS33120;Name=LDO49_RS33120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS33120;pseudo=true NZ_CAJZAV010000280.1 Protein Homology CDS 31817 32775 . + 0 ID=cds-LDO49_RS33120;Parent=gene-LDO49_RS33120;Note=frameshifted;Ontology_term=GO:0006281,GO:0019104,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546507.1;locus_tag=LDO49_RS33120;product=DNA-3-methyladenine glycosylase family protein;pseudo=true;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 33252 34865 . + . ID=gene-LDO49_RS33125;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=LDO49_RS33125;old_locus_tag=BCEP4_700042 NZ_CAJZAV010000280.1 Protein Homology CDS 33252 34865 . + 0 ID=cds-WP_060072376.1;Parent=gene-LDO49_RS33125;Dbxref=GenBank:WP_060072376.1;Name=WP_060072376.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009962323.1;locus_tag=LDO49_RS33125;product=glutamate--cysteine ligase;protein_id=WP_060072376.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 34968 35279 . - . ID=gene-LDO49_RS33130;Name=LDO49_RS33130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33130;old_locus_tag=BCEP4_700043 NZ_CAJZAV010000280.1 Protein Homology CDS 34968 35279 . - 0 ID=cds-WP_059710405.1;Parent=gene-LDO49_RS33130;Dbxref=GenBank:WP_059710405.1;Name=WP_059710405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477430.1;locus_tag=LDO49_RS33130;product=DUF4148 domain-containing protein;protein_id=WP_059710405.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 35699 37339 . + . ID=gene-LDO49_RS33135;Name=LDO49_RS33135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33135;old_locus_tag=BCEP4_700044 NZ_CAJZAV010000280.1 Protein Homology CDS 35699 37339 . + 0 ID=cds-WP_021157971.1;Parent=gene-LDO49_RS33135;Dbxref=GenBank:WP_021157971.1;Name=WP_021157971.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886442.1;locus_tag=LDO49_RS33135;product=L-lactate permease;protein_id=WP_021157971.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 37435 38370 . - . ID=gene-LDO49_RS33140;Name=LDO49_RS33140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33140;old_locus_tag=BCEP4_700045 NZ_CAJZAV010000280.1 Protein Homology CDS 37435 38370 . - 0 ID=cds-WP_224052748.1;Parent=gene-LDO49_RS33140;Dbxref=GenBank:WP_224052748.1;Name=WP_224052748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546502.1;locus_tag=LDO49_RS33140;product=LysR family transcriptional regulator;protein_id=WP_224052748.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 38600 40774 . + . ID=gene-LDO49_RS33145;Name=LDO49_RS33145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33145;old_locus_tag=BCEP4_700046 NZ_CAJZAV010000280.1 Protein Homology CDS 38600 40774 . + 0 ID=cds-WP_224052749.1;Parent=gene-LDO49_RS33145;Dbxref=GenBank:WP_224052749.1;Name=WP_224052749.1;Ontology_term=GO:0034480;gbkey=CDS;go_function=phosphatidylcholine phospholipase C activity|0034480||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353595.1;locus_tag=LDO49_RS33145;product=phosphocholine-specific phospholipase C;protein_id=WP_224052749.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 40981 41706 . + . ID=gene-LDO49_RS33150;Name=LDO49_RS33150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33150;old_locus_tag=BCEP4_700047 NZ_CAJZAV010000280.1 Protein Homology CDS 40981 41706 . + 0 ID=cds-WP_048025648.1;Parent=gene-LDO49_RS33150;Dbxref=GenBank:WP_048025648.1;Name=WP_048025648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407237.1;locus_tag=LDO49_RS33150;product=phosphonate utilization associated transcriptional regulator;protein_id=WP_048025648.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 41881 42153 . - . ID=gene-LDO49_RS33155;Name=LDO49_RS33155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33155 NZ_CAJZAV010000280.1 GeneMarkS-2+ CDS 41881 42153 . - 0 ID=cds-WP_059487928.1;Parent=gene-LDO49_RS33155;Dbxref=GenBank:WP_059487928.1;Name=WP_059487928.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS33155;product=hypothetical protein;protein_id=WP_059487928.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 42150 42632 . - . ID=gene-LDO49_RS33160;Name=LDO49_RS33160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33160;old_locus_tag=BCEP4_700048 NZ_CAJZAV010000280.1 Protein Homology CDS 42150 42632 . - 0 ID=cds-WP_124844361.1;Parent=gene-LDO49_RS33160;Dbxref=GenBank:WP_124844361.1;Name=WP_124844361.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024779.7;locus_tag=LDO49_RS33160;product=lipoprotein N-acyltransferase Lnb domain-containing protein;protein_id=WP_124844361.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 42939 44327 . - . ID=gene-LDO49_RS33165;Name=LDO49_RS33165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33165;old_locus_tag=BCEP4_700050 NZ_CAJZAV010000280.1 Protein Homology CDS 42939 44327 . - 0 ID=cds-WP_059710392.1;Parent=gene-LDO49_RS33165;Dbxref=GenBank:WP_059710392.1;Name=WP_059710392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756956.1;locus_tag=LDO49_RS33165;product=FAD-dependent oxidoreductase;protein_id=WP_059710392.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 44443 45573 . - . ID=gene-LDO49_RS33170;Name=LDO49_RS33170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33170;old_locus_tag=BCEP4_700051 NZ_CAJZAV010000280.1 Protein Homology CDS 44443 45573 . - 0 ID=cds-WP_060072367.1;Parent=gene-LDO49_RS33170;Dbxref=GenBank:WP_060072367.1;Name=WP_060072367.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353592.1;locus_tag=LDO49_RS33170;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_060072367.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 45622 47349 . - . ID=gene-LDO49_RS33175;Name=LDO49_RS33175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33175;old_locus_tag=BCEP4_700052 NZ_CAJZAV010000280.1 Protein Homology CDS 45622 47349 . - 0 ID=cds-WP_060072366.1;Parent=gene-LDO49_RS33175;Dbxref=GenBank:WP_060072366.1;Name=WP_060072366.1;Ontology_term=GO:0033223,GO:0033225,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353591.1;locus_tag=LDO49_RS33175;product=putative 2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_060072366.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 47346 48437 . - . ID=gene-LDO49_RS33180;Name=LDO49_RS33180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33180;old_locus_tag=BCEP4_700053 NZ_CAJZAV010000280.1 Protein Homology CDS 47346 48437 . - 0 ID=cds-WP_048025652.1;Parent=gene-LDO49_RS33180;Dbxref=GenBank:WP_048025652.1;Name=WP_048025652.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898;gbkey=CDS;go_component=cytoplasmic side of plasma membrane|0009898||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477438.1;locus_tag=LDO49_RS33180;product=putative 2-aminoethylphosphonate ABC transporter ATP-binding protein;protein_id=WP_048025652.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 48535 49590 . - . ID=gene-LDO49_RS33185;Name=LDO49_RS33185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33185;old_locus_tag=BCEP4_700054 NZ_CAJZAV010000280.1 Protein Homology CDS 48535 49590 . - 0 ID=cds-WP_059650125.1;Parent=gene-LDO49_RS33185;Dbxref=GenBank:WP_059650125.1;Name=WP_059650125.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401778.1;locus_tag=LDO49_RS33185;product=putative 2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_059650125.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 49799 51037 . + . ID=gene-LDO49_RS33190;Name=phnA;gbkey=Gene;gene=phnA;gene_biotype=protein_coding;locus_tag=LDO49_RS33190;old_locus_tag=BCEP4_700055 NZ_CAJZAV010000280.1 Protein Homology CDS 49799 51037 . + 0 ID=cds-WP_060072439.1;Parent=gene-LDO49_RS33190;Dbxref=GenBank:WP_060072439.1;Name=WP_060072439.1;Ontology_term=GO:0019636,GO:0047400;gbkey=CDS;gene=phnA;go_function=phosphonoacetate hydrolase activity|0047400||IEA;go_process=phosphonoacetate metabolic process|0019636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214373.1;locus_tag=LDO49_RS33190;product=phosphonoacetate hydrolase;protein_id=WP_060072439.1;transl_table=11 NZ_CAJZAV010000280.1 RefSeq pseudogene 51067 51623 . + . ID=gene-LDO49_RS38380;Name=LDO49_RS38380;end_range=51623,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38380;partial=true;pseudo=true NZ_CAJZAV010000280.1 Protein Homology CDS 51067 51623 . + 0 ID=cds-LDO49_RS38380;Parent=gene-LDO49_RS38380;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0016491;end_range=51623,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407230.1;locus_tag=LDO49_RS38380;partial=true;product=aldehyde dehydrogenase family protein;pseudo=true;transl_table=11 NZ_CAJZAV010000280.1 RefSeq pseudogene 51634 51845 . + . ID=gene-LDO49_RS38385;Name=LDO49_RS38385;end_range=51845,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38385;partial=true;pseudo=true;start_range=.,51634 NZ_CAJZAV010000280.1 Protein Homology CDS 51634 51845 . + 2 ID=cds-LDO49_RS38385;Parent=gene-LDO49_RS38385;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016491;end_range=51845,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407230.1;locus_tag=LDO49_RS38385;partial=true;product=aldehyde dehydrogenase family protein;pseudo=true;start_range=.,51634;transl_table=11 NZ_CAJZAV010000280.1 RefSeq pseudogene 51849 51977 . + . ID=gene-LDO49_RS38390;Name=LDO49_RS38390;end_range=51977,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38390;old_locus_tag=BCEP4_700058;partial=true;pseudo=true;start_range=.,51849 NZ_CAJZAV010000280.1 Protein Homology CDS 51849 51977 . + 1 ID=cds-LDO49_RS38390;Parent=gene-LDO49_RS38390;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016491;end_range=51977,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014004629.1;locus_tag=LDO49_RS38390;partial=true;product=aldehyde dehydrogenase family protein;pseudo=true;start_range=.,51849;transl_table=11 NZ_CAJZAV010000280.1 RefSeq gene 51988 52281 . + . ID=gene-LDO49_RS33200;Name=LDO49_RS33200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33200;old_locus_tag=BCEP4_700059;partial=true;start_range=.,51988 NZ_CAJZAV010000280.1 Protein Homology CDS 51988 52281 . + 0 ID=cds-WP_443798021.1;Parent=gene-LDO49_RS33200;Dbxref=GenBank:WP_443798021.1;Name=WP_443798021.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407230.1;locus_tag=LDO49_RS33200;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_443798021.1;start_range=.,51988;transl_table=11 ##sequence-region NZ_CAJZAV010000281.1 1 94011 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000281.1 RefSeq region 1 94011 . + . ID=NZ_CAJZAV010000281.1:1..94011;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_71 NZ_CAJZAV010000281.1 RefSeq gene 138 1229 . - . ID=gene-LDO49_RS33205;Name=LDO49_RS33205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33205;old_locus_tag=BCEP4_710002 NZ_CAJZAV010000281.1 Protein Homology CDS 138 1229 . - 0 ID=cds-WP_224052750.1;Parent=gene-LDO49_RS33205;Dbxref=GenBank:WP_224052750.1;Name=WP_224052750.1;Ontology_term=GO:0006826;gbkey=CDS;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494176.1;locus_tag=LDO49_RS33205;product=hemin-degrading factor;protein_id=WP_224052750.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 1279 3549 . - . ID=gene-LDO49_RS33210;Name=LDO49_RS33210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33210;old_locus_tag=BCEP4_710003 NZ_CAJZAV010000281.1 Protein Homology CDS 1279 3549 . - 0 ID=cds-WP_060220002.1;Parent=gene-LDO49_RS33210;Dbxref=GenBank:WP_060220002.1;Name=WP_060220002.1;Ontology_term=GO:0055085,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489211.1;locus_tag=LDO49_RS33210;product=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;protein_id=WP_060220002.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 3818 4045 . - . ID=gene-LDO49_RS33215;Name=LDO49_RS33215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33215;old_locus_tag=BCEP4_710004 NZ_CAJZAV010000281.1 Protein Homology CDS 3818 4045 . - 0 ID=cds-WP_021156479.1;Parent=gene-LDO49_RS33215;Dbxref=GenBank:WP_021156479.1;Name=WP_021156479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339294.1;locus_tag=LDO49_RS33215;product=hypothetical protein;protein_id=WP_021156479.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 4233 4616 . - . ID=gene-LDO49_RS33220;Name=LDO49_RS33220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33220;old_locus_tag=BCEP4_710005 NZ_CAJZAV010000281.1 Protein Homology CDS 4233 4616 . - 0 ID=cds-WP_042972737.1;Parent=gene-LDO49_RS33220;Dbxref=GenBank:WP_042972737.1;Name=WP_042972737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754284.1;locus_tag=LDO49_RS33220;product=DUF6232 family protein;protein_id=WP_042972737.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 4741 5001 . - . ID=gene-LDO49_RS33225;Name=LDO49_RS33225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33225;old_locus_tag=BCEP4_710006 NZ_CAJZAV010000281.1 Protein Homology CDS 4741 5001 . - 0 ID=cds-WP_011353838.1;Parent=gene-LDO49_RS33225;Dbxref=GenBank:WP_011353838.1;Name=WP_011353838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353838.1;locus_tag=LDO49_RS33225;product=DUF2866 domain-containing protein;protein_id=WP_011353838.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 5209 6366 . - . ID=gene-LDO49_RS33230;Name=LDO49_RS33230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33230;old_locus_tag=BCEP4_710007 NZ_CAJZAV010000281.1 Protein Homology CDS 5209 6366 . - 0 ID=cds-WP_224052751.1;Parent=gene-LDO49_RS33230;Dbxref=GenBank:WP_224052751.1;Name=WP_224052751.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603693.1;locus_tag=LDO49_RS33230;product=porin;protein_id=WP_224052751.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 6675 7481 . + . ID=gene-LDO49_RS33235;Name=LDO49_RS33235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33235;old_locus_tag=BCEP4_710008 NZ_CAJZAV010000281.1 Protein Homology CDS 6675 7481 . + 0 ID=cds-WP_021156475.1;Parent=gene-LDO49_RS33235;Dbxref=GenBank:WP_021156475.1;Name=WP_021156475.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353840.1;locus_tag=LDO49_RS33235;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_021156475.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 7632 8747 . - . ID=gene-LDO49_RS33240;Name=LDO49_RS33240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33240;old_locus_tag=BCEP4_710009 NZ_CAJZAV010000281.1 Protein Homology CDS 7632 8747 . - 0 ID=cds-WP_224052752.1;Parent=gene-LDO49_RS33240;Dbxref=GenBank:WP_224052752.1;Name=WP_224052752.1;Ontology_term=GO:0008270,GO:0016788;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331142.1;locus_tag=LDO49_RS33240;product=succinylglutamate desuccinylase/aspartoacylase family protein;protein_id=WP_224052752.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 8973 9755 . - . ID=gene-LDO49_RS33245;Name=LDO49_RS33245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33245;old_locus_tag=BCEP4_710010 NZ_CAJZAV010000281.1 Protein Homology CDS 8973 9755 . - 0 ID=cds-WP_021156473.1;Parent=gene-LDO49_RS33245;Dbxref=GenBank:WP_021156473.1;Name=WP_021156473.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090096.1;locus_tag=LDO49_RS33245;product=ABC transporter substrate-binding protein;protein_id=WP_021156473.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 9982 10902 . - . ID=gene-LDO49_RS33250;Name=LDO49_RS33250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33250;old_locus_tag=BCEP4_710011 NZ_CAJZAV010000281.1 Protein Homology CDS 9982 10902 . - 0 ID=cds-WP_021156472.1;Parent=gene-LDO49_RS33250;Dbxref=GenBank:WP_021156472.1;Name=WP_021156472.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090095.1;locus_tag=LDO49_RS33250;product=LysR family transcriptional regulator;protein_id=WP_021156472.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 11051 11998 . - . ID=gene-LDO49_RS33255;Name=LDO49_RS33255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33255;old_locus_tag=BCEP4_710012 NZ_CAJZAV010000281.1 Protein Homology CDS 11051 11998 . - 0 ID=cds-WP_021156471.1;Parent=gene-LDO49_RS33255;Dbxref=GenBank:WP_021156471.1;Name=WP_021156471.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548998.1;locus_tag=LDO49_RS33255;product=GlxA family transcriptional regulator;protein_id=WP_021156471.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 12106 12414 . + . ID=gene-LDO49_RS33260;Name=LDO49_RS33260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33260;old_locus_tag=BCEP4_710013 NZ_CAJZAV010000281.1 Protein Homology CDS 12106 12414 . + 0 ID=cds-WP_060074451.1;Parent=gene-LDO49_RS33260;Dbxref=GenBank:WP_060074451.1;Name=WP_060074451.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757203.1;locus_tag=LDO49_RS33260;product=DUF3817 domain-containing protein;protein_id=WP_060074451.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 12411 12812 . + . ID=gene-LDO49_RS33265;Name=LDO49_RS33265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33265;old_locus_tag=BCEP4_710014 NZ_CAJZAV010000281.1 Protein Homology CDS 12411 12812 . + 0 ID=cds-WP_021156469.1;Parent=gene-LDO49_RS33265;Dbxref=GenBank:WP_021156469.1;Name=WP_021156469.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757204.1;locus_tag=LDO49_RS33265;product=CopD family protein;protein_id=WP_021156469.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 12799 13401 . - . ID=gene-LDO49_RS33270;Name=LDO49_RS33270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33270;old_locus_tag=BCEP4_710015 NZ_CAJZAV010000281.1 Protein Homology CDS 12799 13401 . - 0 ID=cds-WP_059648972.1;Parent=gene-LDO49_RS33270;Dbxref=GenBank:WP_059648972.1;Name=WP_059648972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482602.1;locus_tag=LDO49_RS33270;product=hypothetical protein;protein_id=WP_059648972.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 13618 15006 . - . ID=gene-LDO49_RS33275;Name=LDO49_RS33275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33275;old_locus_tag=BCEP4_710016 NZ_CAJZAV010000281.1 Protein Homology CDS 13618 15006 . - 0 ID=cds-WP_224052753.1;Parent=gene-LDO49_RS33275;Dbxref=GenBank:WP_224052753.1;Name=WP_224052753.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757206.1;locus_tag=LDO49_RS33275;product=NCS2 family permease;protein_id=WP_224052753.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 15581 16258 . - . ID=gene-LDO49_RS33280;Name=LDO49_RS33280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33280;old_locus_tag=BCEP4_710019 NZ_CAJZAV010000281.1 Protein Homology CDS 15581 16258 . - 0 ID=cds-WP_060074450.1;Parent=gene-LDO49_RS33280;Dbxref=GenBank:WP_060074450.1;Name=WP_060074450.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549003.1;locus_tag=LDO49_RS33280;product=TetR family transcriptional regulator;protein_id=WP_060074450.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 16307 16972 . + . ID=gene-LDO49_RS33285;Name=LDO49_RS33285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33285;old_locus_tag=BCEP4_710020 NZ_CAJZAV010000281.1 Protein Homology CDS 16307 16972 . + 0 ID=cds-WP_060074449.1;Parent=gene-LDO49_RS33285;Dbxref=GenBank:WP_060074449.1;Name=WP_060074449.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549004.1;locus_tag=LDO49_RS33285;product=O-methyltransferase;protein_id=WP_060074449.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 17118 17636 . - . ID=gene-LDO49_RS33290;Name=LDO49_RS33290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33290;old_locus_tag=BCEP4_710021 NZ_CAJZAV010000281.1 Protein Homology CDS 17118 17636 . - 0 ID=cds-WP_042972736.1;Parent=gene-LDO49_RS33290;Dbxref=GenBank:WP_042972736.1;Name=WP_042972736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493588.1;locus_tag=LDO49_RS33290;product=DUF3455 domain-containing protein;protein_id=WP_042972736.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq pseudogene 17740 17985 . - . ID=gene-LDO49_RS33295;Name=LDO49_RS33295;end_range=17985,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS33295;old_locus_tag=BCEP4_710022;partial=true;pseudo=true NZ_CAJZAV010000281.1 Protein Homology CDS 17740 17985 . - 0 ID=cds-LDO49_RS33295;Parent=gene-LDO49_RS33295;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=17985,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482595.1;locus_tag=LDO49_RS33295;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 17987 18133 . - . ID=gene-LDO49_RS37660;Name=LDO49_RS37660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37660;old_locus_tag=BCEP4_710023 NZ_CAJZAV010000281.1 GeneMarkS-2+ CDS 17987 18133 . - 0 ID=cds-WP_196486354.1;Parent=gene-LDO49_RS37660;Dbxref=GenBank:WP_196486354.1;Name=WP_196486354.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37660;product=hypothetical protein;protein_id=WP_196486354.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 18153 19268 . - . ID=gene-LDO49_RS33300;Name=LDO49_RS33300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33300;old_locus_tag=BCEP4_710024 NZ_CAJZAV010000281.1 Protein Homology CDS 18153 19268 . - 0 ID=cds-WP_060074447.1;Parent=gene-LDO49_RS33300;Dbxref=GenBank:WP_060074447.1;Name=WP_060074447.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216325.1;locus_tag=LDO49_RS33300;product=alkene reductase;protein_id=WP_060074447.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 19333 20139 . - . ID=gene-LDO49_RS33305;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=LDO49_RS33305;old_locus_tag=BCEP4_710025 NZ_CAJZAV010000281.1 Protein Homology CDS 19333 20139 . - 0 ID=cds-WP_059590975.1;Parent=gene-LDO49_RS33305;Dbxref=GenBank:WP_059590975.1;Name=WP_059590975.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366975.1;locus_tag=LDO49_RS33305;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_059590975.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 20291 21247 . - . ID=gene-LDO49_RS33310;Name=LDO49_RS33310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33310;old_locus_tag=BCEP4_710027 NZ_CAJZAV010000281.1 Protein Homology CDS 20291 21247 . - 0 ID=cds-WP_124475475.1;Parent=gene-LDO49_RS33310;Dbxref=GenBank:WP_124475475.1;Name=WP_124475475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549009.1;locus_tag=LDO49_RS33310;product=LLM class oxidoreductase;protein_id=WP_124475475.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 21267 21590 . - . ID=gene-LDO49_RS33315;Name=LDO49_RS33315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33315;old_locus_tag=BCEP4_710028 NZ_CAJZAV010000281.1 Protein Homology CDS 21267 21590 . - 0 ID=cds-WP_048023473.1;Parent=gene-LDO49_RS33315;Dbxref=GenBank:WP_048023473.1;Name=WP_048023473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900915.1;locus_tag=LDO49_RS33315;product=MoaF-related domain-containing protein;protein_id=WP_048023473.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 21619 22821 . - . ID=gene-LDO49_RS33320;Name=LDO49_RS33320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33320;old_locus_tag=BCEP4_710029 NZ_CAJZAV010000281.1 Protein Homology CDS 21619 22821 . - 0 ID=cds-WP_059487487.1;Parent=gene-LDO49_RS33320;Dbxref=GenBank:WP_059487487.1;Name=WP_059487487.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480404.1;locus_tag=LDO49_RS33320;product=MFS transporter;protein_id=WP_059487487.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 22923 23867 . + . ID=gene-LDO49_RS33325;Name=LDO49_RS33325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33325;old_locus_tag=BCEP4_710030 NZ_CAJZAV010000281.1 Protein Homology CDS 22923 23867 . + 0 ID=cds-WP_059487484.1;Parent=gene-LDO49_RS33325;Dbxref=GenBank:WP_059487484.1;Name=WP_059487484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900917.1;locus_tag=LDO49_RS33325;product=LysR family transcriptional regulator;protein_id=WP_059487484.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 24042 25517 . - . ID=gene-LDO49_RS33330;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=LDO49_RS33330;old_locus_tag=BCEP4_710031 NZ_CAJZAV010000281.1 Protein Homology CDS 24042 25517 . - 0 ID=cds-WP_060074445.1;Parent=gene-LDO49_RS33330;Dbxref=GenBank:WP_060074445.1;Name=WP_060074445.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900918.1;locus_tag=LDO49_RS33330;product=glucose-6-phosphate dehydrogenase;protein_id=WP_060074445.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 25719 26297 . + . ID=gene-LDO49_RS33335;Name=LDO49_RS33335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33335;old_locus_tag=BCEP4_710032 NZ_CAJZAV010000281.1 Protein Homology CDS 25719 26297 . + 0 ID=cds-WP_059487482.1;Parent=gene-LDO49_RS33335;Dbxref=GenBank:WP_059487482.1;Name=WP_059487482.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366969.1;locus_tag=LDO49_RS33335;product=TetR/AcrR family transcriptional regulator;protein_id=WP_059487482.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 26451 27326 . + . ID=gene-LDO49_RS33340;Name=LDO49_RS33340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33340;old_locus_tag=BCEP4_710033 NZ_CAJZAV010000281.1 Protein Homology CDS 26451 27326 . + 0 ID=cds-WP_060057063.1;Parent=gene-LDO49_RS33340;Dbxref=GenBank:WP_060057063.1;Name=WP_060057063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549015.1;locus_tag=LDO49_RS33340;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_060057063.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 27547 28257 . - . ID=gene-LDO49_RS33345;Name=LDO49_RS33345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33345;old_locus_tag=BCEP4_710034 NZ_CAJZAV010000281.1 Protein Homology CDS 27547 28257 . - 0 ID=cds-WP_059487476.1;Parent=gene-LDO49_RS33345;Dbxref=GenBank:WP_059487476.1;Name=WP_059487476.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480413.1;locus_tag=LDO49_RS33345;product=IclR family transcriptional regulator;protein_id=WP_059487476.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 28423 29121 . + . ID=gene-LDO49_RS33350;Name=LDO49_RS33350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33350;old_locus_tag=BCEP4_710035 NZ_CAJZAV010000281.1 Protein Homology CDS 28423 29121 . + 0 ID=cds-WP_027790435.1;Parent=gene-LDO49_RS33350;Dbxref=GenBank:WP_027790435.1;Name=WP_027790435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494199.1;locus_tag=LDO49_RS33350;product=diguanylate cyclase;protein_id=WP_027790435.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 29121 30068 . + . ID=gene-LDO49_RS33355;Name=LDO49_RS33355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33355;old_locus_tag=BCEP4_710036 NZ_CAJZAV010000281.1 Protein Homology CDS 29121 30068 . + 0 ID=cds-WP_021156451.1;Parent=gene-LDO49_RS33355;Dbxref=GenBank:WP_021156451.1;Name=WP_021156451.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406183.1;locus_tag=LDO49_RS33355;product=hydroxyacid dehydrogenase;protein_id=WP_021156451.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 30090 31031 . + . ID=gene-LDO49_RS33360;Name=LDO49_RS33360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33360;old_locus_tag=BCEP4_710037 NZ_CAJZAV010000281.1 Protein Homology CDS 30090 31031 . + 0 ID=cds-WP_124475474.1;Parent=gene-LDO49_RS33360;Dbxref=GenBank:WP_124475474.1;Name=WP_124475474.1;Ontology_term=GO:0005515,GO:0016787,GO:0046872;gbkey=CDS;go_function=protein binding|0005515||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339317.1;locus_tag=LDO49_RS33360;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_124475474.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 31118 32497 . + . ID=gene-LDO49_RS33365;Name=LDO49_RS33365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33365;old_locus_tag=BCEP4_710038 NZ_CAJZAV010000281.1 Protein Homology CDS 31118 32497 . + 0 ID=cds-WP_027790438.1;Parent=gene-LDO49_RS33365;Dbxref=GenBank:WP_027790438.1;Name=WP_027790438.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480417.1;locus_tag=LDO49_RS33365;product=MFS transporter;protein_id=WP_027790438.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 32548 33699 . + . ID=gene-LDO49_RS33370;Name=LDO49_RS33370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33370;old_locus_tag=BCEP4_710039 NZ_CAJZAV010000281.1 Protein Homology CDS 32548 33699 . + 0 ID=cds-WP_060074441.1;Parent=gene-LDO49_RS33370;Dbxref=GenBank:WP_060074441.1;Name=WP_060074441.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339319.1;locus_tag=LDO49_RS33370;product=porin;protein_id=WP_060074441.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 33711 34757 . + . ID=gene-LDO49_RS33375;Name=LDO49_RS33375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33375;old_locus_tag=BCEP4_710040 NZ_CAJZAV010000281.1 Protein Homology CDS 33711 34757 . + 0 ID=cds-WP_060074440.1;Parent=gene-LDO49_RS33375;Dbxref=GenBank:WP_060074440.1;Name=WP_060074440.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549027.1;locus_tag=LDO49_RS33375;product=amidohydrolase family protein;protein_id=WP_060074440.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 34754 36034 . + . ID=gene-LDO49_RS33380;Name=LDO49_RS33380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33380;old_locus_tag=BCEP4_710042 NZ_CAJZAV010000281.1 Protein Homology CDS 34754 36034 . + 0 ID=cds-WP_060074439.1;Parent=gene-LDO49_RS33380;Dbxref=GenBank:WP_060074439.1;Name=WP_060074439.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217357.1;locus_tag=LDO49_RS33380;product=MFS transporter;protein_id=WP_060074439.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 36031 37266 . + . ID=gene-LDO49_RS33385;Name=LDO49_RS33385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33385;old_locus_tag=BCEP4_710041 NZ_CAJZAV010000281.1 Protein Homology CDS 36031 37266 . + 0 ID=cds-WP_060074438.1;Parent=gene-LDO49_RS33385;Dbxref=GenBank:WP_060074438.1;Name=WP_060074438.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020070939.1;locus_tag=LDO49_RS33385;product=MFS transporter;protein_id=WP_060074438.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 37289 38611 . + . ID=gene-LDO49_RS33390;Name=LDO49_RS33390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33390;old_locus_tag=BCEP4_710043 NZ_CAJZAV010000281.1 Protein Homology CDS 37289 38611 . + 0 ID=cds-WP_060074437.1;Parent=gene-LDO49_RS33390;Dbxref=GenBank:WP_060074437.1;Name=WP_060074437.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549030.1;locus_tag=LDO49_RS33390;product=MFS transporter;protein_id=WP_060074437.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 38614 39546 . + . ID=gene-LDO49_RS33395;Name=LDO49_RS33395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33395;old_locus_tag=BCEP4_710044 NZ_CAJZAV010000281.1 Protein Homology CDS 38614 39546 . + 0 ID=cds-WP_060074436.1;Parent=gene-LDO49_RS33395;Dbxref=GenBank:WP_060074436.1;Name=WP_060074436.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406191.1;locus_tag=LDO49_RS33395;product=amidohydrolase family protein;protein_id=WP_060074436.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 39607 39951 . + . ID=gene-LDO49_RS33400;Name=LDO49_RS33400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33400;old_locus_tag=BCEP4_710045 NZ_CAJZAV010000281.1 GeneMarkS-2+ CDS 39607 39951 . + 0 ID=cds-WP_224052754.1;Parent=gene-LDO49_RS33400;Dbxref=GenBank:WP_224052754.1;Name=WP_224052754.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS33400;product=hypothetical protein;protein_id=WP_224052754.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 40193 41383 . + . ID=gene-LDO49_RS33405;Name=LDO49_RS33405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33405;old_locus_tag=BCEP4_710047 NZ_CAJZAV010000281.1 Protein Homology CDS 40193 41383 . + 0 ID=cds-WP_060074435.1;Parent=gene-LDO49_RS33405;Dbxref=GenBank:WP_060074435.1;Name=WP_060074435.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757233.1;locus_tag=LDO49_RS33405;product=M20 aminoacylase family protein;protein_id=WP_060074435.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 41440 42771 . + . ID=gene-LDO49_RS33410;Name=LDO49_RS33410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33410;old_locus_tag=BCEP4_710048 NZ_CAJZAV010000281.1 Protein Homology CDS 41440 42771 . + 0 ID=cds-WP_060074434.1;Parent=gene-LDO49_RS33410;Dbxref=GenBank:WP_060074434.1;Name=WP_060074434.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757234.1;locus_tag=LDO49_RS33410;product=MFS transporter;protein_id=WP_060074434.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 42813 43733 . - . ID=gene-LDO49_RS33415;Name=LDO49_RS33415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33415;old_locus_tag=BCEP4_710049 NZ_CAJZAV010000281.1 Protein Homology CDS 42813 43733 . - 0 ID=cds-WP_048023460.1;Parent=gene-LDO49_RS33415;Dbxref=GenBank:WP_048023460.1;Name=WP_048023460.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546832.1;locus_tag=LDO49_RS33415;product=LysR family transcriptional regulator;protein_id=WP_048023460.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 43870 44643 . + . ID=gene-LDO49_RS33420;Name=LDO49_RS33420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33420;old_locus_tag=BCEP4_710050 NZ_CAJZAV010000281.1 Protein Homology CDS 43870 44643 . + 0 ID=cds-WP_059487454.1;Parent=gene-LDO49_RS33420;Dbxref=GenBank:WP_059487454.1;Name=WP_059487454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482624.1;locus_tag=LDO49_RS33420;product=transporter substrate-binding domain-containing protein;protein_id=WP_059487454.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 44703 45818 . + . ID=gene-LDO49_RS33425;Name=LDO49_RS33425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33425;old_locus_tag=BCEP4_710051 NZ_CAJZAV010000281.1 Protein Homology CDS 44703 45818 . + 0 ID=cds-WP_021156432.1;Parent=gene-LDO49_RS33425;Dbxref=GenBank:WP_021156432.1;Name=WP_021156432.1;Ontology_term=GO:0008270,GO:0016788;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494219.1;locus_tag=LDO49_RS33425;product=succinylglutamate desuccinylase/aspartoacylase family protein;protein_id=WP_021156432.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 45977 46963 . - . ID=gene-LDO49_RS33430;Name=LDO49_RS33430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33430;old_locus_tag=BCEP4_710052 NZ_CAJZAV010000281.1 Protein Homology CDS 45977 46963 . - 0 ID=cds-WP_165582066.1;Parent=gene-LDO49_RS33430;Dbxref=GenBank:WP_165582066.1;Name=WP_165582066.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012428011.1;locus_tag=LDO49_RS33430;product=LysR family transcriptional regulator;protein_id=WP_165582066.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 47115 48434 . + . ID=gene-LDO49_RS33435;Name=LDO49_RS33435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33435;old_locus_tag=BCEP4_710053 NZ_CAJZAV010000281.1 Protein Homology CDS 47115 48434 . + 0 ID=cds-WP_224052755.1;Parent=gene-LDO49_RS33435;Dbxref=GenBank:WP_224052755.1;Name=WP_224052755.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006158138.1;locus_tag=LDO49_RS33435;product=MFS transporter;protein_id=WP_224052755.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 48519 50033 . + . ID=gene-LDO49_RS33440;Name=LDO49_RS33440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33440;old_locus_tag=BCEP4_710054 NZ_CAJZAV010000281.1 Protein Homology CDS 48519 50033 . + 0 ID=cds-WP_060074431.1;Parent=gene-LDO49_RS33440;Dbxref=GenBank:WP_060074431.1;Name=WP_060074431.1;Ontology_term=GO:0006508,GO:0008237,GO:0008270;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006158139.1;locus_tag=LDO49_RS33440;product=M81 family metallopeptidase;protein_id=WP_060074431.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 50179 50967 . - . ID=gene-LDO49_RS33445;Name=LDO49_RS33445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33445;old_locus_tag=BCEP4_710055 NZ_CAJZAV010000281.1 Protein Homology CDS 50179 50967 . - 0 ID=cds-WP_059487748.1;Parent=gene-LDO49_RS33445;Dbxref=GenBank:WP_059487748.1;Name=WP_059487748.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010107642.1;locus_tag=LDO49_RS33445;product=IclR family transcriptional regulator;protein_id=WP_059487748.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 51195 52397 . + . ID=gene-LDO49_RS33450;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;locus_tag=LDO49_RS33450;old_locus_tag=BCEP4_710056 NZ_CAJZAV010000281.1 Protein Homology CDS 51195 52397 . + 0 ID=cds-WP_027790454.1;Parent=gene-LDO49_RS33450;Dbxref=GenBank:WP_027790454.1;Name=WP_027790454.1;Ontology_term=GO:0019619,GO:0016747;gbkey=CDS;gene=pcaF;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197326.1;locus_tag=LDO49_RS33450;product=3-oxoadipyl-CoA thiolase;protein_id=WP_027790454.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 52528 53007 . - . ID=gene-LDO49_RS33455;Name=LDO49_RS33455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33455;old_locus_tag=BCEP4_710057 NZ_CAJZAV010000281.1 Protein Homology CDS 52528 53007 . - 0 ID=cds-WP_224052763.1;Parent=gene-LDO49_RS33455;Dbxref=GenBank:WP_224052763.1;Name=WP_224052763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353878.1;locus_tag=LDO49_RS33455;product=DUF523 domain-containing protein;protein_id=WP_224052763.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 53138 53698 . - . ID=gene-LDO49_RS33460;Name=LDO49_RS33460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33460;old_locus_tag=BCEP4_710058 NZ_CAJZAV010000281.1 Protein Homology CDS 53138 53698 . - 0 ID=cds-WP_048023453.1;Parent=gene-LDO49_RS33460;Dbxref=GenBank:WP_048023453.1;Name=WP_048023453.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339333.1;locus_tag=LDO49_RS33460;product=GNAT family N-acetyltransferase;protein_id=WP_048023453.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 53695 54552 . - . ID=gene-LDO49_RS33465;Name=LDO49_RS33465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33465;old_locus_tag=BCEP4_710059 NZ_CAJZAV010000281.1 Protein Homology CDS 53695 54552 . - 0 ID=cds-WP_059496369.1;Parent=gene-LDO49_RS33465;Dbxref=GenBank:WP_059496369.1;Name=WP_059496369.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480435.1;locus_tag=LDO49_RS33465;product=class I SAM-dependent methyltransferase;protein_id=WP_059496369.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 54877 56421 . + . ID=gene-LDO49_RS33470;Name=LDO49_RS33470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33470;old_locus_tag=BCEP4_710060 NZ_CAJZAV010000281.1 Protein Homology CDS 54877 56421 . + 0 ID=cds-WP_059591008.1;Parent=gene-LDO49_RS33470;Dbxref=GenBank:WP_059591008.1;Name=WP_059591008.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659670.1;locus_tag=LDO49_RS33470;product=methyl-accepting chemotaxis protein;protein_id=WP_059591008.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 56843 58387 . + . ID=gene-LDO49_RS33475;Name=LDO49_RS33475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33475;old_locus_tag=BCEP4_710061 NZ_CAJZAV010000281.1 Protein Homology CDS 56843 58387 . + 0 ID=cds-WP_021156417.1;Parent=gene-LDO49_RS33475;Dbxref=GenBank:WP_021156417.1;Name=WP_021156417.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659670.1;locus_tag=LDO49_RS33475;product=methyl-accepting chemotaxis protein;protein_id=WP_021156417.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 58459 58908 . - . ID=gene-LDO49_RS33480;Name=LDO49_RS33480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33480;old_locus_tag=BCEP4_710062 NZ_CAJZAV010000281.1 Protein Homology CDS 58459 58908 . - 0 ID=cds-WP_224052756.1;Parent=gene-LDO49_RS33480;Dbxref=GenBank:WP_224052756.1;Name=WP_224052756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339529.1;locus_tag=LDO49_RS33480;product=hypothetical protein;protein_id=WP_224052756.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 59325 59783 . - . ID=gene-LDO49_RS33485;Name=LDO49_RS33485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33485 NZ_CAJZAV010000281.1 Protein Homology CDS 59325 59783 . - 0 ID=cds-WP_224052757.1;Parent=gene-LDO49_RS33485;Dbxref=GenBank:WP_224052757.1;Name=WP_224052757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339529.1;locus_tag=LDO49_RS33485;product=hypothetical protein;protein_id=WP_224052757.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 59776 60423 . - . ID=gene-LDO49_RS33490;Name=LDO49_RS33490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33490;old_locus_tag=BCEP4_710065 NZ_CAJZAV010000281.1 Protein Homology CDS 59776 60423 . - 0 ID=cds-WP_048028574.1;Parent=gene-LDO49_RS33490;Dbxref=GenBank:WP_048028574.1;Name=WP_048028574.1;Ontology_term=GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756076.1;locus_tag=LDO49_RS33490;product=M35 family metallo-endopeptidase;protein_id=WP_048028574.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 60428 60964 . - . ID=gene-LDO49_RS33495;Name=LDO49_RS33495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33495 NZ_CAJZAV010000281.1 Protein Homology CDS 60428 60964 . - 0 ID=cds-WP_059496451.1;Parent=gene-LDO49_RS33495;Dbxref=GenBank:WP_059496451.1;Name=WP_059496451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756077.1;locus_tag=LDO49_RS33495;product=PAAR domain-containing protein;protein_id=WP_059496451.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 60975 61148 . - . ID=gene-LDO49_RS33500;Name=LDO49_RS33500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33500;old_locus_tag=BCEP4_710067 NZ_CAJZAV010000281.1 GeneMarkS-2+ CDS 60975 61148 . - 0 ID=cds-WP_155627523.1;Parent=gene-LDO49_RS33500;Dbxref=GenBank:WP_155627523.1;Name=WP_155627523.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS33500;product=hypothetical protein;protein_id=WP_155627523.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 61692 63161 . - . ID=gene-LDO49_RS33505;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=LDO49_RS33505;old_locus_tag=BCEP4_710068 NZ_CAJZAV010000281.1 Protein Homology CDS 61692 63161 . - 0 ID=cds-WP_021156413.1;Parent=gene-LDO49_RS33505;Dbxref=GenBank:WP_021156413.1;Name=WP_021156413.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894094.1;locus_tag=LDO49_RS33505;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_021156413.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 63245 64528 . - . ID=gene-LDO49_RS33510;Name=LDO49_RS33510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33510;old_locus_tag=BCEP4_710069 NZ_CAJZAV010000281.1 Protein Homology CDS 63245 64528 . - 0 ID=cds-WP_021156412.1;Parent=gene-LDO49_RS33510;Dbxref=GenBank:WP_021156412.1;Name=WP_021156412.1;Ontology_term=GO:0009448,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603826.1;locus_tag=LDO49_RS33510;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_021156412.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 64655 66166 . + . ID=gene-LDO49_RS33515;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=LDO49_RS33515;old_locus_tag=BCEP4_710070 NZ_CAJZAV010000281.1 Protein Homology CDS 64655 66166 . + 0 ID=cds-WP_021156411.1;Parent=gene-LDO49_RS33515;Dbxref=GenBank:WP_021156411.1;Name=WP_021156411.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491984.1;locus_tag=LDO49_RS33515;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_021156411.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 66217 67053 . - . ID=gene-LDO49_RS33520;Name=LDO49_RS33520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33520;old_locus_tag=BCEP4_710071 NZ_CAJZAV010000281.1 Protein Homology CDS 66217 67053 . - 0 ID=cds-WP_048023441.1;Parent=gene-LDO49_RS33520;Dbxref=GenBank:WP_048023441.1;Name=WP_048023441.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900986.1;locus_tag=LDO49_RS33520;product=DMT family transporter;protein_id=WP_048023441.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 67169 68233 . + . ID=gene-LDO49_RS33525;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=LDO49_RS33525;old_locus_tag=BCEP4_710072 NZ_CAJZAV010000281.1 Protein Homology CDS 67169 68233 . + 0 ID=cds-WP_081067369.1;Parent=gene-LDO49_RS33525;Dbxref=GenBank:WP_081067369.1;Name=WP_081067369.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900987.1;locus_tag=LDO49_RS33525;product=selenide%2C water dikinase SelD;protein_id=WP_081067369.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 68306 68896 . + . ID=gene-LDO49_RS33530;Name=LDO49_RS33530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33530;old_locus_tag=BCEP4_710073 NZ_CAJZAV010000281.1 Protein Homology CDS 68306 68896 . + 0 ID=cds-WP_048023438.1;Parent=gene-LDO49_RS33530;Dbxref=GenBank:WP_048023438.1;Name=WP_048023438.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406835.1;locus_tag=LDO49_RS33530;product=LysE family translocator;protein_id=WP_048023438.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 69181 70260 . + . ID=gene-LDO49_RS33535;Name=LDO49_RS33535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33535;old_locus_tag=BCEP4_710074 NZ_CAJZAV010000281.1 Protein Homology CDS 69181 70260 . + 0 ID=cds-WP_021156407.1;Parent=gene-LDO49_RS33535;Dbxref=GenBank:WP_021156407.1;Name=WP_021156407.1;Ontology_term=GO:0006139,GO:0001882,GO:0002060,GO:0004731,GO:0042301,GO:0042802,GO:0047975;gbkey=CDS;go_function=nucleoside binding|0001882||IEA,purine nucleobase binding|0002060||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,phosphate ion binding|0042301||IEA,identical protein binding|0042802||IEA,guanosine phosphorylase activity|0047975||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188476.1;locus_tag=LDO49_RS33535;product=purine-nucleoside phosphorylase;protein_id=WP_021156407.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 70469 70762 . - . ID=gene-LDO49_RS33540;Name=LDO49_RS33540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33540;old_locus_tag=BCEP4_710075 NZ_CAJZAV010000281.1 Protein Homology CDS 70469 70762 . - 0 ID=cds-WP_042972716.1;Parent=gene-LDO49_RS33540;Dbxref=GenBank:WP_042972716.1;Name=WP_042972716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339340.1;locus_tag=LDO49_RS33540;product=DUF4148 domain-containing protein;protein_id=WP_042972716.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 71207 72211 . - . ID=gene-LDO49_RS33545;Name=ceoR;gbkey=Gene;gene=ceoR;gene_biotype=protein_coding;locus_tag=LDO49_RS33545;old_locus_tag=BCEP4_710076 NZ_CAJZAV010000281.1 Protein Homology CDS 71207 72211 . - 0 ID=cds-WP_021156406.1;Parent=gene-LDO49_RS33545;Dbxref=GenBank:WP_021156406.1;Name=WP_021156406.1;gbkey=CDS;gene=ceoR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484497.1;locus_tag=LDO49_RS33545;product=putative multidrug efflux transcriptional regulator CeoR;protein_id=WP_021156406.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 72386 73246 . + . ID=gene-LDO49_RS33550;Name=LDO49_RS33550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33550;old_locus_tag=BCEP4_710077 NZ_CAJZAV010000281.1 Protein Homology CDS 72386 73246 . + 0 ID=cds-WP_021156405.1;Parent=gene-LDO49_RS33550;Dbxref=GenBank:WP_021156405.1;Name=WP_021156405.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659656.1;locus_tag=LDO49_RS33550;product=alpha/beta hydrolase;protein_id=WP_021156405.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 73280 74497 . + . ID=gene-LDO49_RS33555;Name=ceoA;gbkey=Gene;gene=ceoA;gene_biotype=protein_coding;locus_tag=LDO49_RS33555;old_locus_tag=BCEP4_710078 NZ_CAJZAV010000281.1 Protein Homology CDS 73280 74497 . + 0 ID=cds-WP_027790469.1;Parent=gene-LDO49_RS33555;Dbxref=GenBank:WP_027790469.1;Name=WP_027790469.1;gbkey=CDS;gene=ceoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484484.1;locus_tag=LDO49_RS33555;product=multidrug efflux RND transporter periplasmic adaptor subunit CeoA;protein_id=WP_027790469.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 74543 77743 . + . ID=gene-LDO49_RS33560;Name=ceoB;gbkey=Gene;gene=ceoB;gene_biotype=protein_coding;locus_tag=LDO49_RS33560;old_locus_tag=BCEP4_710079 NZ_CAJZAV010000281.1 Protein Homology CDS 74543 77743 . + 0 ID=cds-WP_021156403.1;Parent=gene-LDO49_RS33560;Dbxref=GenBank:WP_021156403.1;Name=WP_021156403.1;gbkey=CDS;gene=ceoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880927.1;locus_tag=LDO49_RS33560;product=multidrug efflux RND transporter permease subunit CeoB;protein_id=WP_021156403.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 77754 79289 . + . ID=gene-LDO49_RS33565;Name=opcM;gbkey=Gene;gene=opcM;gene_biotype=protein_coding;locus_tag=LDO49_RS33565;old_locus_tag=BCEP4_710080 NZ_CAJZAV010000281.1 Protein Homology CDS 77754 79289 . + 0 ID=cds-WP_021156402.1;Parent=gene-LDO49_RS33565;Dbxref=GenBank:WP_021156402.1;Name=WP_021156402.1;gbkey=CDS;gene=opcM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484479.1;locus_tag=LDO49_RS33565;product=multidrug efflux transporter outer membrane subunit OpcM;protein_id=WP_021156402.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 79479 80993 . - . ID=gene-LDO49_RS33570;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=LDO49_RS33570;old_locus_tag=BCEP4_710081 NZ_CAJZAV010000281.1 Protein Homology CDS 79479 80993 . - 0 ID=cds-WP_060074548.1;Parent=gene-LDO49_RS33570;Dbxref=GenBank:WP_060074548.1;Name=WP_060074548.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012428006.1;locus_tag=LDO49_RS33570;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_060074548.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 81132 81869 . + . ID=gene-LDO49_RS33575;Name=LDO49_RS33575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33575;old_locus_tag=BCEP4_710082 NZ_CAJZAV010000281.1 Protein Homology CDS 81132 81869 . + 0 ID=cds-WP_021156400.1;Parent=gene-LDO49_RS33575;Dbxref=GenBank:WP_021156400.1;Name=WP_021156400.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012428005.1;locus_tag=LDO49_RS33575;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_021156400.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 81926 82402 . + . ID=gene-LDO49_RS33580;Name=LDO49_RS33580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33580;old_locus_tag=BCEP4_710083 NZ_CAJZAV010000281.1 Protein Homology CDS 81926 82402 . + 0 ID=cds-WP_224052758.1;Parent=gene-LDO49_RS33580;Dbxref=GenBank:WP_224052758.1;Name=WP_224052758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012428004.1;locus_tag=LDO49_RS33580;product=cupin domain-containing protein;protein_id=WP_224052758.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 82562 83452 . - . ID=gene-LDO49_RS33585;Name=LDO49_RS33585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33585;old_locus_tag=BCEP4_710084 NZ_CAJZAV010000281.1 Protein Homology CDS 82562 83452 . - 0 ID=cds-WP_059648945.1;Parent=gene-LDO49_RS33585;Dbxref=GenBank:WP_059648945.1;Name=WP_059648945.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353914.1;locus_tag=LDO49_RS33585;product=LysR family transcriptional regulator;protein_id=WP_059648945.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 83551 83994 . + . ID=gene-LDO49_RS33590;Name=LDO49_RS33590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33590;old_locus_tag=BCEP4_710085 NZ_CAJZAV010000281.1 Protein Homology CDS 83551 83994 . + 0 ID=cds-WP_042972729.1;Parent=gene-LDO49_RS33590;Dbxref=GenBank:WP_042972729.1;Name=WP_042972729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353915.1;locus_tag=LDO49_RS33590;product=PACE efflux transporter;protein_id=WP_042972729.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 84202 85053 . - . ID=gene-LDO49_RS33595;Name=LDO49_RS33595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33595;old_locus_tag=BCEP4_710086 NZ_CAJZAV010000281.1 Protein Homology CDS 84202 85053 . - 0 ID=cds-WP_042972712.1;Parent=gene-LDO49_RS33595;Dbxref=GenBank:WP_042972712.1;Name=WP_042972712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366906.1;locus_tag=LDO49_RS33595;product=alpha/beta fold hydrolase;protein_id=WP_042972712.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 85343 85672 . - . ID=gene-LDO49_RS33600;Name=LDO49_RS33600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33600;old_locus_tag=BCEP4_710087 NZ_CAJZAV010000281.1 Protein Homology CDS 85343 85672 . - 0 ID=cds-WP_060224897.1;Parent=gene-LDO49_RS33600;Dbxref=GenBank:WP_060224897.1;Name=WP_060224897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366903.1;locus_tag=LDO49_RS33600;product=DUF3579 domain-containing protein;protein_id=WP_060224897.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 85695 87056 . - . ID=gene-LDO49_RS33605;Name=LDO49_RS33605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33605;old_locus_tag=BCEP4_710088 NZ_CAJZAV010000281.1 Protein Homology CDS 85695 87056 . - 0 ID=cds-WP_224052759.1;Parent=gene-LDO49_RS33605;Dbxref=GenBank:WP_224052759.1;Name=WP_224052759.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339347.1;locus_tag=LDO49_RS33605;product=sigma-54-dependent transcriptional regulator;protein_id=WP_224052759.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 87046 88929 . - . ID=gene-LDO49_RS33610;Name=LDO49_RS33610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33610;old_locus_tag=BCEP4_710089 NZ_CAJZAV010000281.1 Protein Homology CDS 87046 88929 . - 0 ID=cds-WP_059708897.1;Parent=gene-LDO49_RS33610;Dbxref=GenBank:WP_059708897.1;Name=WP_059708897.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406854.1;locus_tag=LDO49_RS33610;product=sensor histidine kinase;protein_id=WP_059708897.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 89057 90421 . - . ID=gene-LDO49_RS33615;Name=LDO49_RS33615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33615;old_locus_tag=BCEP4_710090 NZ_CAJZAV010000281.1 Protein Homology CDS 89057 90421 . - 0 ID=cds-WP_224052760.1;Parent=gene-LDO49_RS33615;Dbxref=GenBank:WP_224052760.1;Name=WP_224052760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014901002.1;locus_tag=LDO49_RS33615;product=2-hydroxycarboxylate transporter family protein;protein_id=WP_224052760.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 90844 91674 . + . ID=gene-LDO49_RS33620;Name=LDO49_RS33620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33620;old_locus_tag=BCEP4_710092 NZ_CAJZAV010000281.1 Protein Homology CDS 90844 91674 . + 0 ID=cds-WP_021156388.1;Parent=gene-LDO49_RS33620;Dbxref=GenBank:WP_021156388.1;Name=WP_021156388.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216354.1;locus_tag=LDO49_RS33620;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_021156388.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 91686 93104 . + . ID=gene-LDO49_RS33625;Name=LDO49_RS33625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33625;old_locus_tag=BCEP4_710091 NZ_CAJZAV010000281.1 Protein Homology CDS 91686 93104 . + 0 ID=cds-WP_224052761.1;Parent=gene-LDO49_RS33625;Dbxref=GenBank:WP_224052761.1;Name=WP_224052761.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480459.1;locus_tag=LDO49_RS33625;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_224052761.1;transl_table=11 NZ_CAJZAV010000281.1 RefSeq gene 93123 94011 . + . ID=gene-LDO49_RS33630;Name=LDO49_RS33630;end_range=94011,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33630;partial=true NZ_CAJZAV010000281.1 Protein Homology CDS 93123 94011 . + 0 ID=cds-WP_224052762.1;Parent=gene-LDO49_RS33630;Dbxref=GenBank:WP_224052762.1;Name=WP_224052762.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;end_range=94011,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494247.1;locus_tag=LDO49_RS33630;partial=true;product=methionine ABC transporter ATP-binding protein;protein_id=WP_224052762.1;transl_table=11 ##sequence-region NZ_CAJZAV010000282.1 1 2031 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000282.1 RefSeq region 1 2031 . + . ID=NZ_CAJZAV010000282.1:1..2031;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_72 NZ_CAJZAV010000282.1 RefSeq gene 3 1976 . + . ID=gene-LDO49_RS33635;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=LDO49_RS33635;old_locus_tag=BCEP4_720001 NZ_CAJZAV010000282.1 Protein Homology CDS 3 1976 . + 0 ID=cds-WP_224052764.1;Parent=gene-LDO49_RS33635;Dbxref=GenBank:WP_224052764.1;Name=WP_224052764.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486128.1;locus_tag=LDO49_RS33635;product=acetate--CoA ligase;protein_id=WP_224052764.1;transl_table=11 ##sequence-region NZ_CAJZAV010000283.1 1 25804 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000283.1 RefSeq region 1 25804 . + . ID=NZ_CAJZAV010000283.1:1..25804;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_73 NZ_CAJZAV010000283.1 RefSeq gene 1 280 . + . ID=gene-LDO49_RS33640;Name=LDO49_RS33640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33640;old_locus_tag=BCEP4_730001;partial=true;start_range=.,1 NZ_CAJZAV010000283.1 Protein Homology CDS 1 280 . + 1 ID=cds-WP_224052765.1;Parent=gene-LDO49_RS33640;Dbxref=GenBank:WP_224052765.1;Name=WP_224052765.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495576.1;locus_tag=LDO49_RS33640;partial=true;product=HEAT repeat domain-containing protein;protein_id=WP_224052765.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 277 591 . + . ID=gene-LDO49_RS33645;Name=LDO49_RS33645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33645;old_locus_tag=BCEP4_730002 NZ_CAJZAV010000283.1 Protein Homology CDS 277 591 . + 0 ID=cds-WP_060073030.1;Parent=gene-LDO49_RS33645;Dbxref=GenBank:WP_060073030.1;Name=WP_060073030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411514.1;locus_tag=LDO49_RS33645;product=gamma-butyrobetaine hydroxylase-like domain-containing protein;protein_id=WP_060073030.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 689 1573 . + . ID=gene-LDO49_RS33650;Name=LDO49_RS33650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33650;old_locus_tag=BCEP4_730003 NZ_CAJZAV010000283.1 Protein Homology CDS 689 1573 . + 0 ID=cds-WP_224052766.1;Parent=gene-LDO49_RS33650;Dbxref=GenBank:WP_224052766.1;Name=WP_224052766.1;Ontology_term=GO:0016491,GO:0050661,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478526.1;locus_tag=LDO49_RS33650;product=NAD(P)-dependent oxidoreductase;protein_id=WP_224052766.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 1620 2111 . + . ID=gene-LDO49_RS33655;Name=LDO49_RS33655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33655;old_locus_tag=BCEP4_730004 NZ_CAJZAV010000283.1 Protein Homology CDS 1620 2111 . + 0 ID=cds-WP_060073028.1;Parent=gene-LDO49_RS33655;Dbxref=GenBank:WP_060073028.1;Name=WP_060073028.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352424.1;locus_tag=LDO49_RS33655;product=NUDIX hydrolase;protein_id=WP_060073028.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 2214 2678 . + . ID=gene-LDO49_RS33660;Name=LDO49_RS33660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33660;old_locus_tag=BCEP4_730005 NZ_CAJZAV010000283.1 Protein Homology CDS 2214 2678 . + 0 ID=cds-WP_060073026.1;Parent=gene-LDO49_RS33660;Dbxref=GenBank:WP_060073026.1;Name=WP_060073026.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006391146.1;locus_tag=LDO49_RS33660;product=acetyltransferase;protein_id=WP_060073026.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 2807 3163 . - . ID=gene-LDO49_RS37665;Name=LDO49_RS37665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37665;old_locus_tag=BCEP4_730006 NZ_CAJZAV010000283.1 GeneMarkS-2+ CDS 2807 3163 . - 0 ID=cds-WP_372585886.1;Parent=gene-LDO49_RS37665;Dbxref=GenBank:WP_372585886.1;Name=WP_372585886.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37665;product=hypothetical protein;protein_id=WP_372585886.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 3185 3361 . - . ID=gene-LDO49_RS37670;Name=LDO49_RS37670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37670;old_locus_tag=BCEP4_730007 NZ_CAJZAV010000283.1 Protein Homology CDS 3185 3361 . - 0 ID=cds-WP_372585887.1;Parent=gene-LDO49_RS37670;Dbxref=GenBank:WP_372585887.1;Name=WP_372585887.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012655.6;locus_tag=LDO49_RS37670;product=TetR/AcrR family transcriptional regulator;protein_id=WP_372585887.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 3470 4123 . + . ID=gene-LDO49_RS33670;Name=LDO49_RS33670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33670;old_locus_tag=BCEP4_730008 NZ_CAJZAV010000283.1 Protein Homology CDS 3470 4123 . + 0 ID=cds-WP_060073024.1;Parent=gene-LDO49_RS33670;Dbxref=GenBank:WP_060073024.1;Name=WP_060073024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352427.1;locus_tag=LDO49_RS33670;product=DJ-1/PfpI family protein;protein_id=WP_060073024.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 4359 4976 . + . ID=gene-LDO49_RS33675;Name=LDO49_RS33675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33675;old_locus_tag=BCEP4_730009 NZ_CAJZAV010000283.1 Protein Homology CDS 4359 4976 . + 0 ID=cds-WP_059494117.1;Parent=gene-LDO49_RS33675;Dbxref=GenBank:WP_059494117.1;Name=WP_059494117.1;Ontology_term=GO:0003677,GO:0008408;gbkey=CDS;go_function=DNA binding|0003677||IEA,3'-5' exonuclease activity|0008408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495570.1;locus_tag=LDO49_RS33675;product=3'-5' exonuclease;protein_id=WP_059494117.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 5182 6537 . - . ID=gene-LDO49_RS33680;Name=LDO49_RS33680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33680;old_locus_tag=BCEP4_730010 NZ_CAJZAV010000283.1 Protein Homology CDS 5182 6537 . - 0 ID=cds-WP_224052767.1;Parent=gene-LDO49_RS33680;Dbxref=GenBank:WP_224052767.1;Name=WP_224052767.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF012907.6;locus_tag=LDO49_RS33680;product=glycosyl hydrolase family 18 protein;protein_id=WP_224052767.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 7618 7839 . - . ID=gene-LDO49_RS33685;Name=LDO49_RS33685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33685;old_locus_tag=BCEP4_730011 NZ_CAJZAV010000283.1 Protein Homology CDS 7618 7839 . - 0 ID=cds-WP_060073143.1;Parent=gene-LDO49_RS33685;Dbxref=GenBank:WP_060073143.1;Name=WP_060073143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018311887.1;locus_tag=LDO49_RS33685;product=hypothetical protein;protein_id=WP_060073143.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 7847 8251 . - . ID=gene-LDO49_RS33690;Name=LDO49_RS33690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33690;old_locus_tag=BCEP4_730012 NZ_CAJZAV010000283.1 GeneMarkS-2+ CDS 7847 8251 . - 0 ID=cds-WP_124474943.1;Parent=gene-LDO49_RS33690;Dbxref=GenBank:WP_124474943.1;Name=WP_124474943.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS33690;product=hypothetical protein;protein_id=WP_124474943.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 8638 9303 . + . ID=gene-LDO49_RS33695;Name=LDO49_RS33695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33695;old_locus_tag=BCEP4_730013 NZ_CAJZAV010000283.1 Protein Homology CDS 8638 9303 . + 0 ID=cds-WP_124474941.1;Parent=gene-LDO49_RS33695;Dbxref=GenBank:WP_124474941.1;Name=WP_124474941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015912907.1;locus_tag=LDO49_RS33695;product=DUF6988 family protein;protein_id=WP_124474941.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 9335 9673 . - . ID=gene-LDO49_RS33700;Name=LDO49_RS33700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33700;old_locus_tag=BCEP4_730015 NZ_CAJZAV010000283.1 Protein Homology CDS 9335 9673 . - 0 ID=cds-WP_124474940.1;Parent=gene-LDO49_RS33700;Dbxref=GenBank:WP_124474940.1;Name=WP_124474940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012249082.1;locus_tag=LDO49_RS33700;product=DUF2958 domain-containing protein;protein_id=WP_124474940.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 10162 11502 . + . ID=gene-LDO49_RS33705;Name=LDO49_RS33705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33705;old_locus_tag=BCEP4_730017 NZ_CAJZAV010000283.1 GeneMarkS-2+ CDS 10162 11502 . + 0 ID=cds-WP_124474939.1;Parent=gene-LDO49_RS33705;Dbxref=GenBank:WP_124474939.1;Name=WP_124474939.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS33705;product=hypothetical protein;protein_id=WP_124474939.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 11751 13835 . + . ID=gene-LDO49_RS33710;Name=LDO49_RS33710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33710;old_locus_tag=BCEP4_730019 NZ_CAJZAV010000283.1 Protein Homology CDS 11751 13835 . + 0 ID=cds-WP_124474938.1;Parent=gene-LDO49_RS33710;Dbxref=GenBank:WP_124474938.1;Name=WP_124474938.1;Ontology_term=GO:0004519,GO:0004527,GO:0005524,GO:0016887,GO:0046872;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,exonuclease activity|0004527||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF024573.6;locus_tag=LDO49_RS33710;product=ATP-dependent nuclease;protein_id=WP_124474938.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 13832 15565 . + . ID=gene-LDO49_RS33715;Name=LDO49_RS33715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33715;old_locus_tag=BCEP4_730020 NZ_CAJZAV010000283.1 Protein Homology CDS 13832 15565 . + 0 ID=cds-WP_060222470.1;Parent=gene-LDO49_RS33715;Dbxref=GenBank:WP_060222470.1;Name=WP_060222470.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF024642.6;locus_tag=LDO49_RS33715;product=UvrD-helicase domain-containing protein;protein_id=WP_060222470.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 15654 16055 . + . ID=gene-LDO49_RS33720;Name=LDO49_RS33720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33720;old_locus_tag=BCEP4_730021 NZ_CAJZAV010000283.1 Protein Homology CDS 15654 16055 . + 0 ID=cds-WP_081067298.1;Parent=gene-LDO49_RS33720;Dbxref=GenBank:WP_081067298.1;Name=WP_081067298.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011516216.1;locus_tag=LDO49_RS33720;product=helix-turn-helix transcriptional regulator;protein_id=WP_081067298.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 16257 17204 . - . ID=gene-LDO49_RS33725;Name=LDO49_RS33725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33725;old_locus_tag=BCEP4_730023 NZ_CAJZAV010000283.1 Protein Homology CDS 16257 17204 . - 0 ID=cds-WP_060073018.1;Parent=gene-LDO49_RS33725;Dbxref=GenBank:WP_060073018.1;Name=WP_060073018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016903537.1;locus_tag=LDO49_RS33725;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_060073018.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 17188 18012 . - . ID=gene-LDO49_RS33730;Name=LDO49_RS33730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33730;old_locus_tag=BCEP4_730024 NZ_CAJZAV010000283.1 Protein Homology CDS 17188 18012 . - 0 ID=cds-WP_060073016.1;Parent=gene-LDO49_RS33730;Dbxref=GenBank:WP_060073016.1;Name=WP_060073016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011796424.1;locus_tag=LDO49_RS33730;product=type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein;protein_id=WP_060073016.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 18165 19379 . - . ID=gene-LDO49_RS33735;Name=LDO49_RS33735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33735;old_locus_tag=BCEP4_730025 NZ_CAJZAV010000283.1 Protein Homology CDS 18165 19379 . - 0 ID=cds-WP_224052768.1;Parent=gene-LDO49_RS33735;Dbxref=GenBank:WP_224052768.1;Name=WP_224052768.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657262.1;locus_tag=LDO49_RS33735;product=tyrosine-type recombinase/integrase;protein_id=WP_224052768.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 19723 21342 . - . ID=gene-LDO49_RS33740;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=LDO49_RS33740;old_locus_tag=BCEP4_730027 NZ_CAJZAV010000283.1 Protein Homology CDS 19723 21342 . - 0 ID=cds-WP_027787108.1;Parent=gene-LDO49_RS33740;Dbxref=GenBank:WP_027787108.1;Name=WP_027787108.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402676.1;locus_tag=LDO49_RS33740;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_027787108.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 21459 22070 . - . ID=gene-LDO49_RS33745;Name=LDO49_RS33745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33745;old_locus_tag=BCEP4_730028 NZ_CAJZAV010000283.1 Protein Homology CDS 21459 22070 . - 0 ID=cds-WP_059490060.1;Parent=gene-LDO49_RS33745;Dbxref=GenBank:WP_059490060.1;Name=WP_059490060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761440.1;locus_tag=LDO49_RS33745;product=hypothetical protein;protein_id=WP_059490060.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 22077 23537 . - . ID=gene-LDO49_RS33750;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=LDO49_RS33750;old_locus_tag=BCEP4_730029 NZ_CAJZAV010000283.1 Protein Homology CDS 22077 23537 . - 0 ID=cds-WP_048020927.1;Parent=gene-LDO49_RS33750;Dbxref=GenBank:WP_048020927.1;Name=WP_048020927.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065652.1;locus_tag=LDO49_RS33750;product=IMP dehydrogenase;protein_id=WP_048020927.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 23816 24667 . - . ID=gene-LDO49_RS33755;Name=LDO49_RS33755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33755;old_locus_tag=BCEP4_730030 NZ_CAJZAV010000283.1 Protein Homology CDS 23816 24667 . - 0 ID=cds-WP_060073014.1;Parent=gene-LDO49_RS33755;Dbxref=GenBank:WP_060073014.1;Name=WP_060073014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549556.1;locus_tag=LDO49_RS33755;product=DUF2182 domain-containing protein;protein_id=WP_060073014.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq gene 24645 25409 . - . ID=gene-LDO49_RS33760;Name=LDO49_RS33760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33760;old_locus_tag=BCEP4_730031 NZ_CAJZAV010000283.1 Protein Homology CDS 24645 25409 . - 0 ID=cds-WP_042974816.1;Parent=gene-LDO49_RS33760;Dbxref=GenBank:WP_042974816.1;Name=WP_042974816.1;Ontology_term=GO:0015035,GO:0015036;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA,disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478517.1;locus_tag=LDO49_RS33760;product=DUF899 domain-containing protein;protein_id=WP_042974816.1;transl_table=11 NZ_CAJZAV010000283.1 RefSeq pseudogene 25629 25804 . + . ID=gene-LDO49_RS38395;Name=LDO49_RS38395;end_range=25804,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38395;partial=true;pseudo=true;start_range=.,25629 NZ_CAJZAV010000283.1 Protein Homology CDS 25629 25804 . + 0 ID=cds-LDO49_RS38395;Parent=gene-LDO49_RS38395;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=25804,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495565.1;locus_tag=LDO49_RS38395;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,25629;transl_table=11 ##sequence-region NZ_CAJZAV010000284.1 1 27023 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000284.1 RefSeq region 1 27023 . + . ID=NZ_CAJZAV010000284.1:1..27023;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_74 NZ_CAJZAV010000284.1 RefSeq gene 1 748 . - . ID=gene-LDO49_RS33770;Name=LDO49_RS33770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33770;partial=true;start_range=.,1 NZ_CAJZAV010000284.1 Protein Homology CDS 1 748 . - 0 ID=cds-WP_224052769.1;Parent=gene-LDO49_RS33770;Dbxref=GenBank:WP_224052769.1;Name=WP_224052769.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467681.1;locus_tag=LDO49_RS33770;partial=true;product=LysR family transcriptional regulator;protein_id=WP_224052769.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 855 1745 . + . ID=gene-LDO49_RS33775;Name=LDO49_RS33775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33775;old_locus_tag=BCEP4_740002 NZ_CAJZAV010000284.1 Protein Homology CDS 855 1745 . + 0 ID=cds-WP_224052770.1;Parent=gene-LDO49_RS33775;Dbxref=GenBank:WP_224052770.1;Name=WP_224052770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657692.1;locus_tag=LDO49_RS33775;product=alpha/beta fold hydrolase;protein_id=WP_224052770.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 1783 2682 . - . ID=gene-LDO49_RS33780;Name=LDO49_RS33780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33780;old_locus_tag=BCEP4_740003 NZ_CAJZAV010000284.1 Protein Homology CDS 1783 2682 . - 0 ID=cds-WP_224052771.1;Parent=gene-LDO49_RS33780;Dbxref=GenBank:WP_224052771.1;Name=WP_224052771.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750032.1;locus_tag=LDO49_RS33780;product=SDR family oxidoreductase;protein_id=WP_224052771.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 2722 3459 . - . ID=gene-LDO49_RS33785;Name=LDO49_RS33785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33785;old_locus_tag=BCEP4_740004 NZ_CAJZAV010000284.1 Protein Homology CDS 2722 3459 . - 0 ID=cds-WP_124624639.1;Parent=gene-LDO49_RS33785;Dbxref=GenBank:WP_124624639.1;Name=WP_124624639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545991.1;locus_tag=LDO49_RS33785;product=SDR family oxidoreductase;protein_id=WP_124624639.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 3577 4479 . + . ID=gene-LDO49_RS33790;Name=LDO49_RS33790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33790;old_locus_tag=BCEP4_740005 NZ_CAJZAV010000284.1 Protein Homology CDS 3577 4479 . + 0 ID=cds-WP_059484675.1;Parent=gene-LDO49_RS33790;Dbxref=GenBank:WP_059484675.1;Name=WP_059484675.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478070.1;locus_tag=LDO49_RS33790;product=LysR family transcriptional regulator;protein_id=WP_059484675.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 4508 4675 . - . ID=gene-LDO49_RS33795;Name=LDO49_RS33795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33795 NZ_CAJZAV010000284.1 Protein Homology CDS 4508 4675 . - 0 ID=cds-WP_021160775.1;Parent=gene-LDO49_RS33795;Dbxref=GenBank:WP_021160775.1;Name=WP_021160775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750029.1;locus_tag=LDO49_RS33795;product=hypothetical protein;protein_id=WP_021160775.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 4823 4907 . - . ID=gene-LDO49_RS33800;Name=LDO49_RS33800;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS33800;old_locus_tag=BCEP4_TRNA36 NZ_CAJZAV010000284.1 tRNAscan-SE tRNA 4823 4907 . - . ID=rna-LDO49_RS33800;Parent=gene-LDO49_RS33800;anticodon=(pos:complement(4871..4873));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS33800;product=tRNA-Leu NZ_CAJZAV010000284.1 tRNAscan-SE exon 4823 4907 . - . ID=exon-LDO49_RS33800-1;Parent=rna-LDO49_RS33800;anticodon=(pos:complement(4871..4873));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS33800;product=tRNA-Leu NZ_CAJZAV010000284.1 RefSeq gene 5004 6161 . - . ID=gene-LDO49_RS33805;Name=LDO49_RS33805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33805;old_locus_tag=BCEP4_740007 NZ_CAJZAV010000284.1 Protein Homology CDS 5004 6161 . - 0 ID=cds-WP_021160776.1;Parent=gene-LDO49_RS33805;Dbxref=GenBank:WP_021160776.1;Name=WP_021160776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398570.1;locus_tag=LDO49_RS33805;product=ABC transporter substrate-binding protein;protein_id=WP_021160776.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 6232 7173 . - . ID=gene-LDO49_RS33810;Name=LDO49_RS33810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33810;old_locus_tag=BCEP4_740008 NZ_CAJZAV010000284.1 Protein Homology CDS 6232 7173 . - 0 ID=cds-WP_014896306.1;Parent=gene-LDO49_RS33810;Dbxref=GenBank:WP_014896306.1;Name=WP_014896306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065144.1;locus_tag=LDO49_RS33810;product=CysB family HTH-type transcriptional regulator;protein_id=WP_014896306.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 7388 9067 . + . ID=gene-LDO49_RS33815;Name=LDO49_RS33815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33815;old_locus_tag=BCEP4_740009 NZ_CAJZAV010000284.1 Protein Homology CDS 7388 9067 . + 0 ID=cds-WP_021160777.1;Parent=gene-LDO49_RS33815;Dbxref=GenBank:WP_021160777.1;Name=WP_021160777.1;Ontology_term=GO:0016491,GO:0020037,GO:0046872,GO:0050311,GO:0051536,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA,sulfite reductase (ferredoxin) activity|0050311||IEA,iron-sulfur cluster binding|0051536||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601281.1;locus_tag=LDO49_RS33815;product=nitrite/sulfite reductase;protein_id=WP_021160777.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 9093 9644 . + . ID=gene-LDO49_RS33820;Name=LDO49_RS33820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33820;old_locus_tag=BCEP4_740010 NZ_CAJZAV010000284.1 Protein Homology CDS 9093 9644 . + 0 ID=cds-WP_021160778.1;Parent=gene-LDO49_RS33820;Dbxref=GenBank:WP_021160778.1;Name=WP_021160778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417197.1;locus_tag=LDO49_RS33820;product=DUF934 domain-containing protein;protein_id=WP_021160778.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 9641 10390 . + . ID=gene-LDO49_RS33825;Name=LDO49_RS33825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33825;old_locus_tag=BCEP4_740011 NZ_CAJZAV010000284.1 Protein Homology CDS 9641 10390 . + 0 ID=cds-WP_021160779.1;Parent=gene-LDO49_RS33825;Dbxref=GenBank:WP_021160779.1;Name=WP_021160779.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657686.1;locus_tag=LDO49_RS33825;product=phosphoadenylyl-sulfate reductase;protein_id=WP_021160779.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 10467 11429 . + . ID=gene-LDO49_RS33830;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=LDO49_RS33830;old_locus_tag=BCEP4_740012 NZ_CAJZAV010000284.1 Protein Homology CDS 10467 11429 . + 0 ID=cds-WP_059496676.1;Parent=gene-LDO49_RS33830;Dbxref=GenBank:WP_059496676.1;Name=WP_059496676.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010114318.1;locus_tag=LDO49_RS33830;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_059496676.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 11452 12768 . + . ID=gene-LDO49_RS33835;Name=LDO49_RS33835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33835;old_locus_tag=BCEP4_740013 NZ_CAJZAV010000284.1 Protein Homology CDS 11452 12768 . + 0 ID=cds-WP_021160781.1;Parent=gene-LDO49_RS33835;Dbxref=GenBank:WP_021160781.1;Name=WP_021160781.1;Ontology_term=GO:0006790,GO:0000166,GO:0003924,GO:0004781;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,GTPase activity|0003924||IEA,sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602383.1;locus_tag=LDO49_RS33835;product=sulfate adenylyltransferase subunit 1;protein_id=WP_021160781.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 12855 13604 . + . ID=gene-LDO49_RS33840;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=LDO49_RS33840;old_locus_tag=BCEP4_740014 NZ_CAJZAV010000284.1 Protein Homology CDS 12855 13604 . + 0 ID=cds-WP_060229181.1;Parent=gene-LDO49_RS33840;Dbxref=GenBank:WP_060229181.1;Name=WP_060229181.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750021.1;locus_tag=LDO49_RS33840;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_060229181.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 13711 14094 . - . ID=gene-LDO49_RS33845;Name=LDO49_RS33845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33845;old_locus_tag=BCEP4_740015 NZ_CAJZAV010000284.1 Protein Homology CDS 13711 14094 . - 0 ID=cds-WP_059590488.1;Parent=gene-LDO49_RS33845;Dbxref=GenBank:WP_059590488.1;Name=WP_059590488.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657682.1;locus_tag=LDO49_RS33845;product=sirohydrochlorin chelatase;protein_id=WP_059590488.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 14122 15270 . - . ID=gene-LDO49_RS33850;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=LDO49_RS33850;old_locus_tag=BCEP4_740016 NZ_CAJZAV010000284.1 Protein Homology CDS 14122 15270 . - 0 ID=cds-WP_021160784.1;Parent=gene-LDO49_RS33850;Dbxref=GenBank:WP_021160784.1;Name=WP_021160784.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009903370.1;locus_tag=LDO49_RS33850;product=LPS export ABC transporter permease LptG;protein_id=WP_021160784.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 15274 16365 . - . ID=gene-LDO49_RS33855;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=LDO49_RS33855;old_locus_tag=BCEP4_740017 NZ_CAJZAV010000284.1 Protein Homology CDS 15274 16365 . - 0 ID=cds-WP_021160785.1;Parent=gene-LDO49_RS33855;Dbxref=GenBank:WP_021160785.1;Name=WP_021160785.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545981.1;locus_tag=LDO49_RS33855;product=LPS export ABC transporter permease LptF;protein_id=WP_021160785.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 16488 17999 . + . ID=gene-LDO49_RS33860;Name=LDO49_RS33860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33860;old_locus_tag=BCEP4_740018 NZ_CAJZAV010000284.1 Protein Homology CDS 16488 17999 . + 0 ID=cds-WP_021160786.1;Parent=gene-LDO49_RS33860;Dbxref=GenBank:WP_021160786.1;Name=WP_021160786.1;Ontology_term=GO:0019538,GO:0070006;gbkey=CDS;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352915.1;locus_tag=LDO49_RS33860;product=leucyl aminopeptidase;protein_id=WP_021160786.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 18034 18450 . + . ID=gene-LDO49_RS33865;Name=LDO49_RS33865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33865;old_locus_tag=BCEP4_740019 NZ_CAJZAV010000284.1 Protein Homology CDS 18034 18450 . + 0 ID=cds-WP_021160787.1;Parent=gene-LDO49_RS33865;Dbxref=GenBank:WP_021160787.1;Name=WP_021160787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750016.1;locus_tag=LDO49_RS33865;product=DNA polymerase III subunit chi;protein_id=WP_021160787.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 18476 19261 . + . ID=gene-LDO49_RS33870;Name=LDO49_RS33870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33870;old_locus_tag=BCEP4_740020 NZ_CAJZAV010000284.1 Protein Homology CDS 18476 19261 . + 0 ID=cds-WP_060069672.1;Parent=gene-LDO49_RS33870;Dbxref=GenBank:WP_060069672.1;Name=WP_060069672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478084.1;locus_tag=LDO49_RS33870;product=DUF2486 family protein;protein_id=WP_060069672.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 19405 19731 . - . ID=gene-LDO49_RS33875;Name=LDO49_RS33875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33875;old_locus_tag=BCEP4_740021 NZ_CAJZAV010000284.1 Protein Homology CDS 19405 19731 . - 0 ID=cds-WP_021160789.1;Parent=gene-LDO49_RS33875;Dbxref=GenBank:WP_021160789.1;Name=WP_021160789.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496118.1;locus_tag=LDO49_RS33875;product=c-type cytochrome;protein_id=WP_021160789.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 19859 21532 . - . ID=gene-LDO49_RS33880;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=LDO49_RS33880;old_locus_tag=BCEP4_740022 NZ_CAJZAV010000284.1 Protein Homology CDS 19859 21532 . - 0 ID=cds-WP_224052772.1;Parent=gene-LDO49_RS33880;Dbxref=GenBank:WP_224052772.1;Name=WP_224052772.1;Ontology_term=GO:0009082,GO:0004160,GO:0051536;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694362.1;locus_tag=LDO49_RS33880;product=dihydroxy-acid dehydratase;protein_id=WP_224052772.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 21670 22584 . + . ID=gene-LDO49_RS33885;Name=LDO49_RS33885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33885;old_locus_tag=BCEP4_740023 NZ_CAJZAV010000284.1 Protein Homology CDS 21670 22584 . + 0 ID=cds-WP_060069670.1;Parent=gene-LDO49_RS33885;Dbxref=GenBank:WP_060069670.1;Name=WP_060069670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896321.1;locus_tag=LDO49_RS33885;product=LysR substrate-binding domain-containing protein;protein_id=WP_060069670.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 22674 23564 . + . ID=gene-LDO49_RS33890;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=LDO49_RS33890;old_locus_tag=BCEP4_740024 NZ_CAJZAV010000284.1 Protein Homology CDS 22674 23564 . + 0 ID=cds-WP_048022580.1;Parent=gene-LDO49_RS33890;Dbxref=GenBank:WP_048022580.1;Name=WP_048022580.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657673.1;locus_tag=LDO49_RS33890;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_048022580.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 23675 24415 . - . ID=gene-LDO49_RS33895;Name=LDO49_RS33895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33895;old_locus_tag=BCEP4_740025 NZ_CAJZAV010000284.1 Protein Homology CDS 23675 24415 . - 0 ID=cds-WP_048022579.1;Parent=gene-LDO49_RS33895;Dbxref=GenBank:WP_048022579.1;Name=WP_048022579.1;Note=The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26%2C from Brucella%2C was shown to assemble into a channel-like structure%2C while YggE from E. coli has been associated with resistance to oxidative stress.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750009.1;locus_tag=LDO49_RS33895;product=SIMPL domain-containing protein;protein_id=WP_048022579.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 24605 25066 . - . ID=gene-LDO49_RS33900;Name=LDO49_RS33900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33900;old_locus_tag=BCEP4_740026 NZ_CAJZAV010000284.1 Protein Homology CDS 24605 25066 . - 0 ID=cds-WP_224052773.1;Parent=gene-LDO49_RS33900;Dbxref=GenBank:WP_224052773.1;Name=WP_224052773.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896324.1;locus_tag=LDO49_RS33900;product=EVE domain-containing protein;protein_id=WP_224052773.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 25138 25319 . - . ID=gene-LDO49_RS33905;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=LDO49_RS33905;old_locus_tag=BCEP4_MISCRNA28 NZ_CAJZAV010000284.1 cmsearch ncRNA 25138 25319 . - . ID=rna-LDO49_RS33905;Parent=gene-LDO49_RS33905;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO49_RS33905;product=6S RNA NZ_CAJZAV010000284.1 cmsearch exon 25138 25319 . - . ID=exon-LDO49_RS33905-1;Parent=rna-LDO49_RS33905;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO49_RS33905;product=6S RNA NZ_CAJZAV010000284.1 RefSeq gene 25401 25715 . - . ID=gene-LDO49_RS33910;Name=LDO49_RS33910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33910;old_locus_tag=BCEP4_740028 NZ_CAJZAV010000284.1 Protein Homology CDS 25401 25715 . - 0 ID=cds-WP_011352906.1;Parent=gene-LDO49_RS33910;Dbxref=GenBank:WP_011352906.1;Name=WP_011352906.1;Ontology_term=GO:0000917,GO:0000921,GO:0043093;gbkey=CDS;go_process=division septum assembly|0000917||IEA,septin ring assembly|0000921||IEA,FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024874.1;locus_tag=LDO49_RS33910;product=cell division protein ZapA;protein_id=WP_011352906.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 25712 26062 . - . ID=gene-LDO49_RS33915;Name=LDO49_RS33915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33915;old_locus_tag=BCEP4_740029 NZ_CAJZAV010000284.1 Protein Homology CDS 25712 26062 . - 0 ID=cds-WP_021160796.1;Parent=gene-LDO49_RS33915;Dbxref=GenBank:WP_021160796.1;Name=WP_021160796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600179.1;locus_tag=LDO49_RS33915;product=hypothetical protein;protein_id=WP_021160796.1;transl_table=11 NZ_CAJZAV010000284.1 cmsearch riboswitch 26217 26470 . + . ID=id-NZ_CAJZAV010000284.1:26217..26470;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAV010000284.1 RefSeq gene 26536 26757 . + . ID=gene-LDO49_RS33920;Name=LDO49_RS33920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33920 NZ_CAJZAV010000284.1 GeneMarkS-2+ CDS 26536 26757 . + 0 ID=cds-WP_131723238.1;Parent=gene-LDO49_RS33920;Dbxref=GenBank:WP_131723238.1;Name=WP_131723238.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS33920;product=hypothetical protein;protein_id=WP_131723238.1;transl_table=11 NZ_CAJZAV010000284.1 RefSeq gene 26754 27023 . + . ID=gene-LDO49_RS33925;Name=LDO49_RS33925;end_range=27023,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33925;partial=true NZ_CAJZAV010000284.1 Protein Homology CDS 26754 27023 . + 0 ID=cds-WP_224052774.1;Parent=gene-LDO49_RS33925;Dbxref=GenBank:WP_224052774.1;Name=WP_224052774.1;Ontology_term=GO:0022857,GO:0016020;end_range=27023,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352904.1;locus_tag=LDO49_RS33925;partial=true;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_224052774.1;transl_table=11 ##sequence-region NZ_CAJZAV010000285.1 1 48904 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000285.1 RefSeq region 1 48904 . + . ID=NZ_CAJZAV010000285.1:1..48904;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_75 NZ_CAJZAV010000285.1 RefSeq gene 1 597 . - . ID=gene-LDO49_RS33930;Name=mdcE;gbkey=Gene;gene=mdcE;gene_biotype=protein_coding;locus_tag=LDO49_RS33930;partial=true;start_range=.,1 NZ_CAJZAV010000285.1 Protein Homology CDS 1 597 . - 0 ID=cds-WP_224052775.1;Parent=gene-LDO49_RS33930;Dbxref=GenBank:WP_224052775.1;Name=WP_224052775.1;Ontology_term=GO:0005975;gbkey=CDS;gene=mdcE;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722800.1;locus_tag=LDO49_RS33930;partial=true;product=biotin-independent malonate decarboxylase subunit gamma;protein_id=WP_224052775.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 584 1519 . - . ID=gene-LDO49_RS33935;Name=LDO49_RS33935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33935;old_locus_tag=BCEP4_750002 NZ_CAJZAV010000285.1 Protein Homology CDS 584 1519 . - 0 ID=cds-WP_059863430.1;Parent=gene-LDO49_RS33935;Dbxref=GenBank:WP_059863430.1;Name=WP_059863430.1;Ontology_term=GO:0005975,GO:0006633,GO:0003989,GO:0016831,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,carboxy-lyase activity|0016831||IEA;go_process=carbohydrate metabolic process|0005975||IEA,fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497631.1;locus_tag=LDO49_RS33935;product=biotin-independent malonate decarboxylase subunit beta;protein_id=WP_059863430.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 1516 1830 . - . ID=gene-LDO49_RS33940;Name=mdcC;gbkey=Gene;gene=mdcC;gene_biotype=protein_coding;locus_tag=LDO49_RS33940;old_locus_tag=BCEP4_750003 NZ_CAJZAV010000285.1 Protein Homology CDS 1516 1830 . - 0 ID=cds-WP_021162697.1;Parent=gene-LDO49_RS33940;Dbxref=GenBank:WP_021162697.1;Name=WP_021162697.1;gbkey=CDS;gene=mdcC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754569.1;locus_tag=LDO49_RS33940;product=malonate decarboxylase acyl carrier protein;protein_id=WP_021162697.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 1841 3487 . - . ID=gene-LDO49_RS33945;Name=mdcA;gbkey=Gene;gene=mdcA;gene_biotype=protein_coding;locus_tag=LDO49_RS33945;old_locus_tag=BCEP4_750004 NZ_CAJZAV010000285.1 Protein Homology CDS 1841 3487 . - 0 ID=cds-WP_224052776.1;Parent=gene-LDO49_RS33945;Dbxref=GenBank:WP_224052776.1;Name=WP_224052776.1;Ontology_term=GO:0006810,GO:0015451,GO:0016740;gbkey=CDS;gene=mdcA;go_function=decarboxylation-driven active transmembrane transporter activity|0015451||IEA,transferase activity|0016740||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764672.1;locus_tag=LDO49_RS33945;product=malonate decarboxylase subunit alpha;protein_id=WP_224052776.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 3622 4389 . - . ID=gene-LDO49_RS33950;Name=madM;gbkey=Gene;gene=madM;gene_biotype=protein_coding;locus_tag=LDO49_RS33950;old_locus_tag=BCEP4_750005 NZ_CAJZAV010000285.1 Protein Homology CDS 3622 4389 . - 0 ID=cds-WP_021162695.1;Parent=gene-LDO49_RS33950;Dbxref=GenBank:WP_021162695.1;Name=WP_021162695.1;Ontology_term=GO:0044668;gbkey=CDS;gene=madM;go_function=sodium:malonate symporter activity|0044668||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363531.1;locus_tag=LDO49_RS33950;product=malonate transporter subunit MadM;protein_id=WP_021162695.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 4401 4796 . - . ID=gene-LDO49_RS33955;Name=madL;gbkey=Gene;gene=madL;gene_biotype=protein_coding;locus_tag=LDO49_RS33955;old_locus_tag=BCEP4_750006 NZ_CAJZAV010000285.1 Protein Homology CDS 4401 4796 . - 0 ID=cds-WP_021162694.1;Parent=gene-LDO49_RS33955;Dbxref=GenBank:WP_021162694.1;Name=WP_021162694.1;Ontology_term=GO:0015849,GO:0005342;gbkey=CDS;gene=madL;go_function=organic acid transmembrane transporter activity|0005342||IEA;go_process=organic acid transport|0015849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897457.1;locus_tag=LDO49_RS33955;product=malonate transporter subunit MadL;protein_id=WP_021162694.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 5125 5973 . + . ID=gene-LDO49_RS33960;Name=LDO49_RS33960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33960;old_locus_tag=BCEP4_750008 NZ_CAJZAV010000285.1 Protein Homology CDS 5125 5973 . + 0 ID=cds-WP_021162693.1;Parent=gene-LDO49_RS33960;Dbxref=GenBank:WP_021162693.1;Name=WP_021162693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754565.1;locus_tag=LDO49_RS33960;product=LysR substrate-binding domain-containing protein;protein_id=WP_021162693.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 6144 6422 . + . ID=gene-LDO49_RS33965;Name=LDO49_RS33965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33965;old_locus_tag=BCEP4_750009 NZ_CAJZAV010000285.1 Protein Homology CDS 6144 6422 . + 0 ID=cds-WP_048025418.1;Parent=gene-LDO49_RS33965;Dbxref=GenBank:WP_048025418.1;Name=WP_048025418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332742.1;locus_tag=LDO49_RS33965;product=DUF4148 domain-containing protein;protein_id=WP_048025418.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 6477 7394 . - . ID=gene-LDO49_RS33970;Name=LDO49_RS33970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33970;old_locus_tag=BCEP4_750010 NZ_CAJZAV010000285.1 Protein Homology CDS 6477 7394 . - 0 ID=cds-WP_059497995.1;Parent=gene-LDO49_RS33970;Dbxref=GenBank:WP_059497995.1;Name=WP_059497995.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754563.1;locus_tag=LDO49_RS33970;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;protein_id=WP_059497995.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 7642 8082 . + . ID=gene-LDO49_RS33975;Name=LDO49_RS33975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33975;old_locus_tag=BCEP4_750012 NZ_CAJZAV010000285.1 Protein Homology CDS 7642 8082 . + 0 ID=cds-WP_059486704.1;Parent=gene-LDO49_RS33975;Dbxref=GenBank:WP_059486704.1;Name=WP_059486704.1;Ontology_term=GO:0009408,GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897461.1;locus_tag=LDO49_RS33975;product=Hsp20/alpha crystallin family protein;protein_id=WP_059486704.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 8099 8509 . + . ID=gene-LDO49_RS33980;Name=LDO49_RS33980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33980;old_locus_tag=BCEP4_750013 NZ_CAJZAV010000285.1 Protein Homology CDS 8099 8509 . + 0 ID=cds-WP_048025420.1;Parent=gene-LDO49_RS33980;Dbxref=GenBank:WP_048025420.1;Name=WP_048025420.1;Ontology_term=GO:0009408,GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328222.1;locus_tag=LDO49_RS33980;product=Hsp20/alpha crystallin family protein;protein_id=WP_048025420.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 8604 8939 . - . ID=gene-LDO49_RS33985;Name=LDO49_RS33985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33985;old_locus_tag=BCEP4_750014 NZ_CAJZAV010000285.1 Protein Homology CDS 8604 8939 . - 0 ID=cds-WP_027787904.1;Parent=gene-LDO49_RS33985;Dbxref=GenBank:WP_027787904.1;Name=WP_027787904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328221.1;locus_tag=LDO49_RS33985;product=TFIIB-type zinc ribbon-containing protein;protein_id=WP_027787904.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 9036 9791 . - . ID=gene-LDO49_RS33990;Name=LDO49_RS33990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33990;old_locus_tag=BCEP4_750015 NZ_CAJZAV010000285.1 Protein Homology CDS 9036 9791 . - 0 ID=cds-WP_021162687.1;Parent=gene-LDO49_RS33990;Dbxref=GenBank:WP_021162687.1;Name=WP_021162687.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754559.1;locus_tag=LDO49_RS33990;product=TerC family protein;protein_id=WP_021162687.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 9900 10793 . + . ID=gene-LDO49_RS33995;Name=LDO49_RS33995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS33995;old_locus_tag=BCEP4_750016 NZ_CAJZAV010000285.1 Protein Homology CDS 9900 10793 . + 0 ID=cds-WP_224052777.1;Parent=gene-LDO49_RS33995;Dbxref=GenBank:WP_224052777.1;Name=WP_224052777.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351568.1;locus_tag=LDO49_RS33995;product=LysR family transcriptional regulator;protein_id=WP_224052777.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 10909 12120 . + . ID=gene-LDO49_RS34000;Name=LDO49_RS34000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34000;old_locus_tag=BCEP4_750017 NZ_CAJZAV010000285.1 Protein Homology CDS 10909 12120 . + 0 ID=cds-WP_224052778.1;Parent=gene-LDO49_RS34000;Dbxref=GenBank:WP_224052778.1;Name=WP_224052778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545054.1;locus_tag=LDO49_RS34000;product=DUF2242 domain-containing protein;protein_id=WP_224052778.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 12311 13231 . - . ID=gene-LDO49_RS34005;Name=LDO49_RS34005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34005;old_locus_tag=BCEP4_750018 NZ_CAJZAV010000285.1 Protein Homology CDS 12311 13231 . - 0 ID=cds-WP_021164262.1;Parent=gene-LDO49_RS34005;Dbxref=GenBank:WP_021164262.1;Name=WP_021164262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656468.1;locus_tag=LDO49_RS34005;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_021164262.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 13411 14322 . + . ID=gene-LDO49_RS34010;Name=LDO49_RS34010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34010;old_locus_tag=BCEP4_750019 NZ_CAJZAV010000285.1 Protein Homology CDS 13411 14322 . + 0 ID=cds-WP_059677616.1;Parent=gene-LDO49_RS34010;Dbxref=GenBank:WP_059677616.1;Name=WP_059677616.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753992.1;locus_tag=LDO49_RS34010;product=LysR family transcriptional regulator;protein_id=WP_059677616.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 15066 16271 . + . ID=gene-LDO49_RS34015;Name=LDO49_RS34015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34015;old_locus_tag=BCEP4_750020 NZ_CAJZAV010000285.1 Protein Homology CDS 15066 16271 . + 0 ID=cds-WP_091922273.1;Parent=gene-LDO49_RS34015;Dbxref=GenBank:WP_091922273.1;Name=WP_091922273.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363519.1;locus_tag=LDO49_RS34015;product=MFS transporter;protein_id=WP_091922273.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 16367 16594 . - . ID=gene-LDO49_RS34020;Name=LDO49_RS34020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34020 NZ_CAJZAV010000285.1 GeneMarkS-2+ CDS 16367 16594 . - 0 ID=cds-WP_224052779.1;Parent=gene-LDO49_RS34020;Dbxref=GenBank:WP_224052779.1;Name=WP_224052779.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS34020;product=hypothetical protein;protein_id=WP_224052779.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 16851 17348 . + . ID=gene-LDO49_RS34025;Name=LDO49_RS34025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34025;old_locus_tag=BCEP4_750022 NZ_CAJZAV010000285.1 Protein Homology CDS 16851 17348 . + 0 ID=cds-WP_059486695.1;Parent=gene-LDO49_RS34025;Dbxref=GenBank:WP_059486695.1;Name=WP_059486695.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351563.1;locus_tag=LDO49_RS34025;product=Csu type fimbrial protein;protein_id=WP_059486695.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 17364 18083 . + . ID=gene-LDO49_RS34030;Name=LDO49_RS34030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34030;old_locus_tag=BCEP4_750023 NZ_CAJZAV010000285.1 Protein Homology CDS 17364 18083 . + 0 ID=cds-WP_059589977.1;Parent=gene-LDO49_RS34030;Dbxref=GenBank:WP_059589977.1;Name=WP_059589977.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351562.1;locus_tag=LDO49_RS34030;product=fimbrial biogenesis chaperone;protein_id=WP_059589977.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 18166 20475 . + . ID=gene-LDO49_RS34035;Name=LDO49_RS34035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34035;old_locus_tag=BCEP4_750024 NZ_CAJZAV010000285.1 Protein Homology CDS 18166 20475 . + 0 ID=cds-WP_372585888.1;Parent=gene-LDO49_RS34035;Dbxref=GenBank:WP_372585888.1;Name=WP_372585888.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351561.1;locus_tag=LDO49_RS34035;product=fimbria/pilus outer membrane usher protein;protein_id=WP_372585888.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 20472 21434 . + . ID=gene-LDO49_RS34040;Name=LDO49_RS34040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34040;old_locus_tag=BCEP4_750025 NZ_CAJZAV010000285.1 Protein Homology CDS 20472 21434 . + 0 ID=cds-WP_021159542.1;Parent=gene-LDO49_RS34040;Dbxref=GenBank:WP_021159542.1;Name=WP_021159542.1;Ontology_term=GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351560.1;locus_tag=LDO49_RS34040;product=Csu type fimbrial protein;protein_id=WP_021159542.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 21467 21757 . - . ID=gene-LDO49_RS34045;Name=LDO49_RS34045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34045;old_locus_tag=BCEP4_750026 NZ_CAJZAV010000285.1 GeneMarkS-2+ CDS 21467 21757 . - 0 ID=cds-WP_224052781.1;Parent=gene-LDO49_RS34045;Dbxref=GenBank:WP_224052781.1;Name=WP_224052781.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS34045;product=hypothetical protein;protein_id=WP_224052781.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 21863 22885 . - . ID=gene-LDO49_RS34050;Name=LDO49_RS34050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34050;old_locus_tag=BCEP4_750027 NZ_CAJZAV010000285.1 Protein Homology CDS 21863 22885 . - 0 ID=cds-WP_059498010.1;Parent=gene-LDO49_RS34050;Dbxref=GenBank:WP_059498010.1;Name=WP_059498010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545050.1;locus_tag=LDO49_RS34050;product=histone deacetylase family protein;protein_id=WP_059498010.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 22935 24206 . - . ID=gene-LDO49_RS34055;Name=LDO49_RS34055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34055;old_locus_tag=BCEP4_750028 NZ_CAJZAV010000285.1 Protein Homology CDS 22935 24206 . - 0 ID=cds-WP_224052782.1;Parent=gene-LDO49_RS34055;Dbxref=GenBank:WP_224052782.1;Name=WP_224052782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753995.1;locus_tag=LDO49_RS34055;product=Zn-dependent hydrolase;protein_id=WP_224052782.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 24238 25548 . - . ID=gene-LDO49_RS34060;Name=LDO49_RS34060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34060;old_locus_tag=BCEP4_750029 NZ_CAJZAV010000285.1 Protein Homology CDS 24238 25548 . - 0 ID=cds-WP_048023682.1;Parent=gene-LDO49_RS34060;Dbxref=GenBank:WP_048023682.1;Name=WP_048023682.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351556.1;locus_tag=LDO49_RS34060;product=MFS transporter;protein_id=WP_048023682.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 25737 26693 . + . ID=gene-LDO49_RS34065;Name=LDO49_RS34065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34065;old_locus_tag=BCEP4_750030 NZ_CAJZAV010000285.1 Protein Homology CDS 25737 26693 . + 0 ID=cds-WP_027787919.1;Parent=gene-LDO49_RS34065;Dbxref=GenBank:WP_027787919.1;Name=WP_027787919.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764686.1;locus_tag=LDO49_RS34065;product=LysR family transcriptional regulator;protein_id=WP_027787919.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 26752 27822 . - . ID=gene-LDO49_RS34070;Name=LDO49_RS34070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34070;old_locus_tag=BCEP4_750031 NZ_CAJZAV010000285.1 Protein Homology CDS 26752 27822 . - 0 ID=cds-WP_224052783.1;Parent=gene-LDO49_RS34070;Dbxref=GenBank:WP_224052783.1;Name=WP_224052783.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497642.1;locus_tag=LDO49_RS34070;product=porin;protein_id=WP_224052783.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 27983 29413 . - . ID=gene-LDO49_RS34075;Name=LDO49_RS34075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34075;old_locus_tag=BCEP4_750032 NZ_CAJZAV010000285.1 Protein Homology CDS 27983 29413 . - 0 ID=cds-WP_193093540.1;Parent=gene-LDO49_RS34075;Dbxref=GenBank:WP_193093540.1;Name=WP_193093540.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656461.1;locus_tag=LDO49_RS34075;product=purine-cytosine permease family protein;protein_id=WP_193093540.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 29717 30394 . - . ID=gene-LDO49_RS34080;Name=LDO49_RS34080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34080;old_locus_tag=BCEP4_750034 NZ_CAJZAV010000285.1 Protein Homology CDS 29717 30394 . - 0 ID=cds-WP_021159549.1;Parent=gene-LDO49_RS34080;Dbxref=GenBank:WP_021159549.1;Name=WP_021159549.1;Ontology_term=GO:0006974,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351547.1;locus_tag=LDO49_RS34080;product=SOS response-associated peptidase family protein;protein_id=WP_021159549.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 30531 30995 . - . ID=gene-LDO49_RS34085;Name=LDO49_RS34085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34085;old_locus_tag=BCEP4_750035 NZ_CAJZAV010000285.1 Protein Homology CDS 30531 30995 . - 0 ID=cds-WP_059815822.1;Parent=gene-LDO49_RS34085;Dbxref=GenBank:WP_059815822.1;Name=WP_059815822.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897476.1;locus_tag=LDO49_RS34085;product=GNAT family N-acetyltransferase;protein_id=WP_059815822.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 30988 31953 . - . ID=gene-LDO49_RS34090;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=LDO49_RS34090;old_locus_tag=BCEP4_750036 NZ_CAJZAV010000285.1 Protein Homology CDS 30988 31953 . - 0 ID=cds-WP_021159551.1;Parent=gene-LDO49_RS34090;Dbxref=GenBank:WP_021159551.1;Name=WP_021159551.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351545.1;locus_tag=LDO49_RS34090;product=agmatinase;protein_id=WP_021159551.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 32081 32998 . + . ID=gene-LDO49_RS34095;Name=LDO49_RS34095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34095;old_locus_tag=BCEP4_750037 NZ_CAJZAV010000285.1 Protein Homology CDS 32081 32998 . + 0 ID=cds-WP_113044998.1;Parent=gene-LDO49_RS34095;Dbxref=GenBank:WP_113044998.1;Name=WP_113044998.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481829.1;locus_tag=LDO49_RS34095;product=LysR family transcriptional regulator;protein_id=WP_113044998.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 33062 33691 . - . ID=gene-LDO49_RS34100;Name=LDO49_RS34100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34100;old_locus_tag=BCEP4_750038 NZ_CAJZAV010000285.1 Protein Homology CDS 33062 33691 . - 0 ID=cds-WP_104768419.1;Parent=gene-LDO49_RS34100;Dbxref=GenBank:WP_104768419.1;Name=WP_104768419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754000.1;locus_tag=LDO49_RS34100;product=NAD(P)H-binding protein;protein_id=WP_104768419.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 34150 34278 . + . ID=gene-LDO49_RS37360;Name=LDO49_RS37360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37360 NZ_CAJZAV010000285.1 GeneMarkS-2+ CDS 34150 34278 . + 0 ID=cds-WP_290369896.1;Parent=gene-LDO49_RS37360;Dbxref=GenBank:WP_290369896.1;Name=WP_290369896.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37360;product=hypothetical protein;protein_id=WP_290369896.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 34375 35766 . - . ID=gene-LDO49_RS34110;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LDO49_RS34110;old_locus_tag=BCEP4_750040 NZ_CAJZAV010000285.1 Protein Homology CDS 34375 35766 . - 0 ID=cds-WP_224052784.1;Parent=gene-LDO49_RS34110;Dbxref=GenBank:WP_224052784.1;Name=WP_224052784.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481751.1;locus_tag=LDO49_RS34110;product=dihydrolipoyl dehydrogenase;protein_id=WP_224052784.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 35772 37109 . - . ID=gene-LDO49_RS34115;Name=LDO49_RS34115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34115;old_locus_tag=BCEP4_750041 NZ_CAJZAV010000285.1 Protein Homology CDS 35772 37109 . - 0 ID=cds-WP_224052785.1;Parent=gene-LDO49_RS34115;Dbxref=GenBank:WP_224052785.1;Name=WP_224052785.1;Ontology_term=GO:0016407,GO:0045240;gbkey=CDS;go_component=alpha-ketoacid dehydrogenase complex|0045240||IEA;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476386.1;locus_tag=LDO49_RS34115;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_224052785.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 37111 38151 . - . ID=gene-LDO49_RS34120;Name=LDO49_RS34120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34120;old_locus_tag=BCEP4_750042 NZ_CAJZAV010000285.1 Protein Homology CDS 37111 38151 . - 0 ID=cds-WP_224052790.1;Parent=gene-LDO49_RS34120;Dbxref=GenBank:WP_224052790.1;Name=WP_224052790.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010097186.1;locus_tag=LDO49_RS34120;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_224052790.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 38154 39386 . - . ID=gene-LDO49_RS34125;Name=LDO49_RS34125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34125;old_locus_tag=BCEP4_750043 NZ_CAJZAV010000285.1 Protein Homology CDS 38154 39386 . - 0 ID=cds-WP_224052786.1;Parent=gene-LDO49_RS34125;Dbxref=GenBank:WP_224052786.1;Name=WP_224052786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760353.1;locus_tag=LDO49_RS34125;product=3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha;protein_id=WP_224052786.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 39792 40418 . - . ID=gene-LDO49_RS34130;Name=LDO49_RS34130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34130;old_locus_tag=BCEP4_750044 NZ_CAJZAV010000285.1 Protein Homology CDS 39792 40418 . - 0 ID=cds-WP_224052787.1;Parent=gene-LDO49_RS34130;Dbxref=GenBank:WP_224052787.1;Name=WP_224052787.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476389.1;locus_tag=LDO49_RS34130;product=flavin reductase family protein;protein_id=WP_224052787.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 41371 42396 . + . ID=gene-LDO49_RS34135;Name=LDO49_RS34135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34135;old_locus_tag=BCEP4_750046 NZ_CAJZAV010000285.1 Protein Homology CDS 41371 42396 . + 0 ID=cds-WP_021159575.1;Parent=gene-LDO49_RS34135;Dbxref=GenBank:WP_021159575.1;Name=WP_021159575.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545033.1;locus_tag=LDO49_RS34135;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_021159575.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 42457 43485 . + . ID=gene-LDO49_RS34140;Name=LDO49_RS34140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34140;old_locus_tag=BCEP4_750048 NZ_CAJZAV010000285.1 Protein Homology CDS 42457 43485 . + 0 ID=cds-WP_021159576.1;Parent=gene-LDO49_RS34140;Dbxref=GenBank:WP_021159576.1;Name=WP_021159576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213723.1;locus_tag=LDO49_RS34140;product=ABC transporter substrate-binding protein;protein_id=WP_021159576.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 43503 44327 . + . ID=gene-LDO49_RS34145;Name=LDO49_RS34145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34145;old_locus_tag=BCEP4_750047 NZ_CAJZAV010000285.1 Protein Homology CDS 43503 44327 . + 0 ID=cds-WP_048024450.1;Parent=gene-LDO49_RS34145;Dbxref=GenBank:WP_048024450.1;Name=WP_048024450.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255790.1;locus_tag=LDO49_RS34145;product=ABC transporter permease;protein_id=WP_048024450.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 44338 45240 . + . ID=gene-LDO49_RS34150;Name=LDO49_RS34150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34150;old_locus_tag=BCEP4_750049 NZ_CAJZAV010000285.1 Protein Homology CDS 44338 45240 . + 0 ID=cds-WP_224052788.1;Parent=gene-LDO49_RS34150;Dbxref=GenBank:WP_224052788.1;Name=WP_224052788.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755746.1;locus_tag=LDO49_RS34150;product=ABC transporter permease;protein_id=WP_224052788.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 45254 46285 . + . ID=gene-LDO49_RS34155;Name=LDO49_RS34155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34155;old_locus_tag=BCEP4_750050 NZ_CAJZAV010000285.1 Protein Homology CDS 45254 46285 . + 0 ID=cds-WP_059855030.1;Parent=gene-LDO49_RS34155;Dbxref=GenBank:WP_059855030.1;Name=WP_059855030.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497656.1;locus_tag=LDO49_RS34155;product=ABC transporter ATP-binding protein;protein_id=WP_059855030.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 46373 47197 . + . ID=gene-LDO49_RS34160;Name=LDO49_RS34160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34160;old_locus_tag=BCEP4_750051 NZ_CAJZAV010000285.1 Protein Homology CDS 46373 47197 . + 0 ID=cds-WP_059649299.1;Parent=gene-LDO49_RS34160;Dbxref=GenBank:WP_059649299.1;Name=WP_059649299.1;Ontology_term=GO:0004112;gbkey=CDS;go_function=cyclic-nucleotide phosphodiesterase activity|0004112||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762416.1;locus_tag=LDO49_RS34160;product=phosphodiesterase;protein_id=WP_059649299.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq gene 47463 48662 . + . ID=gene-LDO49_RS34165;Name=LDO49_RS34165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34165;old_locus_tag=BCEP4_750052 NZ_CAJZAV010000285.1 Protein Homology CDS 47463 48662 . + 0 ID=cds-WP_224052789.1;Parent=gene-LDO49_RS34165;Dbxref=GenBank:WP_224052789.1;Name=WP_224052789.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328206.1;locus_tag=LDO49_RS34165;product=MFS transporter;protein_id=WP_224052789.1;transl_table=11 NZ_CAJZAV010000285.1 RefSeq pseudogene 48684 48904 . - . ID=gene-LDO49_RS34170;Name=LDO49_RS34170;end_range=48904,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS34170;old_locus_tag=BCEP4_750053;partial=true;pseudo=true NZ_CAJZAV010000285.1 Protein Homology CDS 48684 48904 . - 2 ID=cds-LDO49_RS34170;Parent=gene-LDO49_RS34170;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=48904,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884097.1;locus_tag=LDO49_RS34170;partial=true;product=EamA family transporter;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAV010000286.1 1 33938 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000286.1 RefSeq region 1 33938 . + . ID=NZ_CAJZAV010000286.1:1..33938;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_76 NZ_CAJZAV010000286.1 RefSeq gene 1 603 . + . ID=gene-LDO49_RS34175;Name=LDO49_RS34175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34175;old_locus_tag=BCEP4_760001;partial=true;start_range=.,1 NZ_CAJZAV010000286.1 Protein Homology CDS 1 603 . + 0 ID=cds-WP_224052791.1;Parent=gene-LDO49_RS34175;Dbxref=GenBank:WP_224052791.1;Name=WP_224052791.1;Ontology_term=GO:0006631,GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364788.1;locus_tag=LDO49_RS34175;partial=true;product=acyl-CoA dehydrogenase;protein_id=WP_224052791.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 634 1839 . + . ID=gene-LDO49_RS34180;Name=LDO49_RS34180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34180;old_locus_tag=BCEP4_760002 NZ_CAJZAV010000286.1 Protein Homology CDS 634 1839 . + 0 ID=cds-WP_124475996.1;Parent=gene-LDO49_RS34180;Dbxref=GenBank:WP_124475996.1;Name=WP_124475996.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353319.1;locus_tag=LDO49_RS34180;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_124475996.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 1935 2240 . + . ID=gene-LDO49_RS34185;Name=LDO49_RS34185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34185;old_locus_tag=BCEP4_760004 NZ_CAJZAV010000286.1 Protein Homology CDS 1935 2240 . + 0 ID=cds-WP_048023901.1;Parent=gene-LDO49_RS34185;Dbxref=GenBank:WP_048023901.1;Name=WP_048023901.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893193.1;locus_tag=LDO49_RS34185;product=DUF485 domain-containing protein;protein_id=WP_048023901.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 2252 3946 . + . ID=gene-LDO49_RS34190;Name=LDO49_RS34190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34190;old_locus_tag=BCEP4_760003 NZ_CAJZAV010000286.1 Protein Homology CDS 2252 3946 . + 0 ID=cds-WP_060070129.1;Parent=gene-LDO49_RS34190;Dbxref=GenBank:WP_060070129.1;Name=WP_060070129.1;Ontology_term=GO:0006847,GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;go_process=plasma membrane acetate transport|0006847||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658022.1;locus_tag=LDO49_RS34190;product=cation acetate symporter;protein_id=WP_060070129.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 4219 5203 . + . ID=gene-LDO49_RS38400;Name=tssI;end_range=5203,.;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=LDO49_RS38400;old_locus_tag=BCEP4_760005;partial=true NZ_CAJZAV010000286.1 Protein Homology CDS 4219 5203 . + 0 ID=cds-WP_443798022.1;Parent=gene-LDO49_RS38400;Dbxref=GenBank:WP_443798022.1;Name=WP_443798022.1;Ontology_term=GO:0033103;end_range=5203,.;gbkey=CDS;gene=tssI;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020202195.1;locus_tag=LDO49_RS38400;partial=true;product=type VI secretion system tip protein TssI/VgrG;protein_id=WP_443798022.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 5214 5946 . + . ID=gene-LDO49_RS38405;Name=LDO49_RS38405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38405;old_locus_tag=BCEP4_760006;partial=true;start_range=.,5214 NZ_CAJZAV010000286.1 Protein Homology CDS 5214 5946 . + 1 ID=cds-WP_443798023.1;Parent=gene-LDO49_RS38405;Dbxref=GenBank:WP_443798023.1;Name=WP_443798023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008167165.1;locus_tag=LDO49_RS38405;partial=true;product=bacteriophage T4 gp5 trimerisation domain-containing protein;protein_id=WP_443798023.1;start_range=.,5214;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 5964 8528 . + . ID=gene-LDO49_RS34200;Name=LDO49_RS34200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34200;old_locus_tag=BCEP4_760007 NZ_CAJZAV010000286.1 Protein Homology CDS 5964 8528 . + 0 ID=cds-WP_060073150.1;Parent=gene-LDO49_RS34200;Dbxref=GenBank:WP_060073150.1;Name=WP_060073150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012405341.1;locus_tag=LDO49_RS34200;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_060073150.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 8562 9260 . + . ID=gene-LDO49_RS34205;Name=LDO49_RS34205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34205 NZ_CAJZAV010000286.1 GeneMarkS-2+ CDS 8562 9260 . + 0 ID=cds-WP_124476031.1;Parent=gene-LDO49_RS34205;Dbxref=GenBank:WP_124476031.1;Name=WP_124476031.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS34205;product=hypothetical protein;protein_id=WP_124476031.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 11306 12595 . + . ID=gene-LDO49_RS34210;Name=LDO49_RS34210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34210;old_locus_tag=BCEP4_760016 NZ_CAJZAV010000286.1 Protein Homology CDS 11306 12595 . + 0 ID=cds-WP_059489813.1;Parent=gene-LDO49_RS34210;Dbxref=GenBank:WP_059489813.1;Name=WP_059489813.1;Ontology_term=GO:0006835,GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398167.1;locus_tag=LDO49_RS34210;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_059489813.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 12600 14609 . + . ID=gene-LDO49_RS34215;Name=LDO49_RS34215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34215;old_locus_tag=BCEP4_760017 NZ_CAJZAV010000286.1 Protein Homology CDS 12600 14609 . + 0 ID=cds-WP_060073152.1;Parent=gene-LDO49_RS34215;Dbxref=GenBank:WP_060073152.1;Name=WP_060073152.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754802.1;locus_tag=LDO49_RS34215;product=sensor histidine kinase;protein_id=WP_060073152.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 14705 16060 . + . ID=gene-LDO49_RS34220;Name=LDO49_RS34220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34220;old_locus_tag=BCEP4_760018 NZ_CAJZAV010000286.1 Protein Homology CDS 14705 16060 . + 0 ID=cds-WP_027789045.1;Parent=gene-LDO49_RS34220;Dbxref=GenBank:WP_027789045.1;Name=WP_027789045.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198029.1;locus_tag=LDO49_RS34220;product=sigma-54-dependent transcriptional regulator;protein_id=WP_027789045.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 16158 16694 . - . ID=gene-LDO49_RS34225;Name=LDO49_RS34225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34225;old_locus_tag=BCEP4_760019 NZ_CAJZAV010000286.1 Protein Homology CDS 16158 16694 . - 0 ID=cds-WP_027789046.1;Parent=gene-LDO49_RS34225;Dbxref=GenBank:WP_027789046.1;Name=WP_027789046.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886124.1;locus_tag=LDO49_RS34225;product=TlpA disulfide reductase family protein;protein_id=WP_027789046.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 16855 17427 . + . ID=gene-LDO49_RS34230;Name=LDO49_RS34230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34230;old_locus_tag=BCEP4_760020 NZ_CAJZAV010000286.1 Protein Homology CDS 16855 17427 . + 0 ID=cds-WP_060073154.1;Parent=gene-LDO49_RS34230;Dbxref=GenBank:WP_060073154.1;Name=WP_060073154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364781.1;locus_tag=LDO49_RS34230;product=hypothetical protein;protein_id=WP_060073154.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 17760 19364 . - . ID=gene-LDO49_RS34235;Name=LDO49_RS34235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34235;old_locus_tag=BCEP4_760022 NZ_CAJZAV010000286.1 Protein Homology CDS 17760 19364 . - 0 ID=cds-WP_060073156.1;Parent=gene-LDO49_RS34235;Dbxref=GenBank:WP_060073156.1;Name=WP_060073156.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212653.1;locus_tag=LDO49_RS34235;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_060073156.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 19677 19928 . - . ID=gene-LDO49_RS34240;Name=LDO49_RS34240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34240;old_locus_tag=BCEP4_760023 NZ_CAJZAV010000286.1 Protein Homology CDS 19677 19928 . - 0 ID=cds-WP_006489451.1;Parent=gene-LDO49_RS34240;Dbxref=GenBank:WP_006489451.1;Name=WP_006489451.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198021.1;locus_tag=LDO49_RS34240;product=accessory factor UbiK family protein;protein_id=WP_006489451.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 20284 20622 . + . ID=gene-LDO49_RS34245;Name=LDO49_RS34245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34245;old_locus_tag=BCEP4_760024 NZ_CAJZAV010000286.1 Protein Homology CDS 20284 20622 . + 0 ID=cds-WP_027789049.1;Parent=gene-LDO49_RS34245;Dbxref=GenBank:WP_027789049.1;Name=WP_027789049.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018436703.1;locus_tag=LDO49_RS34245;product=P-II family nitrogen regulator;protein_id=WP_027789049.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 20660 22174 . + . ID=gene-LDO49_RS34250;Name=LDO49_RS34250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34250;old_locus_tag=BCEP4_760025 NZ_CAJZAV010000286.1 Protein Homology CDS 20660 22174 . + 0 ID=cds-WP_059489822.1;Parent=gene-LDO49_RS34250;Dbxref=GenBank:WP_059489822.1;Name=WP_059489822.1;Ontology_term=GO:0072488,GO:0008519,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212654.1;locus_tag=LDO49_RS34250;product=ammonium transporter;protein_id=WP_059489822.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 22418 23707 . + . ID=gene-LDO49_RS34255;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=LDO49_RS34255;old_locus_tag=BCEP4_760026 NZ_CAJZAV010000286.1 Protein Homology CDS 22418 23707 . + 0 ID=cds-WP_021164335.1;Parent=gene-LDO49_RS34255;Dbxref=GenBank:WP_021164335.1;Name=WP_021164335.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013337902.1;locus_tag=LDO49_RS34255;product=glutamate--cysteine ligase;protein_id=WP_021164335.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 23734 24690 . + . ID=gene-LDO49_RS34260;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=LDO49_RS34260;old_locus_tag=BCEP4_760027 NZ_CAJZAV010000286.1 Protein Homology CDS 23734 24690 . + 0 ID=cds-WP_027789051.1;Parent=gene-LDO49_RS34260;Dbxref=GenBank:WP_027789051.1;Name=WP_027789051.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090583.1;locus_tag=LDO49_RS34260;product=glutathione synthase;protein_id=WP_027789051.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 24921 25391 . + . ID=gene-LDO49_RS34265;Name=LDO49_RS34265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34265;old_locus_tag=BCEP4_760028 NZ_CAJZAV010000286.1 Protein Homology CDS 24921 25391 . + 0 ID=cds-WP_021163157.1;Parent=gene-LDO49_RS34265;Dbxref=GenBank:WP_021163157.1;Name=WP_021163157.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198014.1;locus_tag=LDO49_RS34265;product=PTS sugar transporter subunit IIA;protein_id=WP_021163157.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 25465 25734 . + . ID=gene-LDO49_RS34270;Name=LDO49_RS34270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34270;old_locus_tag=BCEP4_760029 NZ_CAJZAV010000286.1 Protein Homology CDS 25465 25734 . + 0 ID=cds-WP_006477716.1;Parent=gene-LDO49_RS34270;Dbxref=GenBank:WP_006477716.1;Name=WP_006477716.1;Ontology_term=GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101417.1;locus_tag=LDO49_RS34270;product=HPr family phosphocarrier protein;protein_id=WP_006477716.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 25945 27717 . + . ID=gene-LDO49_RS34275;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=LDO49_RS34275;old_locus_tag=BCEP4_760030 NZ_CAJZAV010000286.1 Protein Homology CDS 25945 27717 . + 0 ID=cds-WP_021163156.1;Parent=gene-LDO49_RS34275;Dbxref=GenBank:WP_021163156.1;Name=WP_021163156.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407042.1;locus_tag=LDO49_RS34275;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_021163156.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 27791 28543 . - . ID=gene-LDO49_RS34280;Name=LDO49_RS34280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34280;old_locus_tag=BCEP4_760031 NZ_CAJZAV010000286.1 Protein Homology CDS 27791 28543 . - 0 ID=cds-WP_060073158.1;Parent=gene-LDO49_RS34280;Dbxref=GenBank:WP_060073158.1;Name=WP_060073158.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198009.1;locus_tag=LDO49_RS34280;product=HesA/MoeB/ThiF family protein;protein_id=WP_060073158.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 28650 30197 . - . ID=gene-LDO49_RS34285;Name=LDO49_RS34285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34285;old_locus_tag=BCEP4_760032 NZ_CAJZAV010000286.1 Protein Homology CDS 28650 30197 . - 0 ID=cds-WP_021163154.1;Parent=gene-LDO49_RS34285;Dbxref=GenBank:WP_021163154.1;Name=WP_021163154.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398184.1;locus_tag=LDO49_RS34285;product=S41 family peptidase;protein_id=WP_021163154.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 30508 31254 . - . ID=gene-LDO49_RS34290;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=LDO49_RS34290;old_locus_tag=BCEP4_760033 NZ_CAJZAV010000286.1 Protein Homology CDS 30508 31254 . - 0 ID=cds-WP_021164239.1;Parent=gene-LDO49_RS34290;Dbxref=GenBank:WP_021164239.1;Name=WP_021164239.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658011.1;locus_tag=LDO49_RS34290;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_021164239.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 31391 31813 . + . ID=gene-LDO49_RS34295;Name=LDO49_RS34295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34295;old_locus_tag=BCEP4_760034 NZ_CAJZAV010000286.1 Protein Homology CDS 31391 31813 . + 0 ID=cds-WP_021164238.1;Parent=gene-LDO49_RS34295;Dbxref=GenBank:WP_021164238.1;Name=WP_021164238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723700.1;locus_tag=LDO49_RS34295;product=rhodanese-like domain-containing protein;protein_id=WP_021164238.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 31810 32070 . + . ID=gene-LDO49_RS34300;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=LDO49_RS34300;old_locus_tag=BCEP4_760035 NZ_CAJZAV010000286.1 Protein Homology CDS 31810 32070 . + 0 ID=cds-WP_021164237.1;Parent=gene-LDO49_RS34300;Dbxref=GenBank:WP_021164237.1;Name=WP_021164237.1;Ontology_term=GO:0045454;gbkey=CDS;gene=grxC;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200200.1;locus_tag=LDO49_RS34300;product=glutaredoxin 3;protein_id=WP_021164237.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 32178 32660 . + . ID=gene-LDO49_RS34305;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=LDO49_RS34305;old_locus_tag=BCEP4_760036 NZ_CAJZAV010000286.1 Protein Homology CDS 32178 32660 . + 0 ID=cds-WP_011353285.1;Parent=gene-LDO49_RS34305;Dbxref=GenBank:WP_011353285.1;Name=WP_011353285.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658008.1;locus_tag=LDO49_RS34305;product=protein-export chaperone SecB;protein_id=WP_011353285.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 32689 33687 . + . ID=gene-LDO49_RS34310;Name=LDO49_RS34310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34310;old_locus_tag=BCEP4_760037 NZ_CAJZAV010000286.1 Protein Homology CDS 32689 33687 . + 0 ID=cds-WP_027789057.1;Parent=gene-LDO49_RS34310;Dbxref=GenBank:WP_027789057.1;Name=WP_027789057.1;Ontology_term=GO:0046167,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate biosynthetic process|0046167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546282.1;locus_tag=LDO49_RS34310;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_027789057.1;transl_table=11 NZ_CAJZAV010000286.1 RefSeq gene 33783 33938 . + . ID=gene-LDO49_RS37675;Name=LDO49_RS37675;end_range=33938,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37675;partial=true NZ_CAJZAV010000286.1 Protein Homology CDS 33783 33938 . + 0 ID=cds-WP_372585889.1;Parent=gene-LDO49_RS37675;Dbxref=GenBank:WP_372585889.1;Name=WP_372585889.1;end_range=33938,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353283.1;locus_tag=LDO49_RS37675;partial=true;product=macro domain-containing protein;protein_id=WP_372585889.1;transl_table=11 ##sequence-region NZ_CAJZAV010000287.1 1 18201 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000287.1 RefSeq region 1 18201 . + . ID=NZ_CAJZAV010000287.1:1..18201;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_77 NZ_CAJZAV010000287.1 RefSeq gene 1 1458 . + . ID=gene-LDO49_RS34320;Name=LDO49_RS34320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34320;old_locus_tag=BCEP4_770001;partial=true;start_range=.,1 NZ_CAJZAV010000287.1 Protein Homology CDS 1 1458 . + 0 ID=cds-WP_224052793.1;Parent=gene-LDO49_RS34320;Dbxref=GenBank:WP_224052793.1;Name=WP_224052793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879967.1;locus_tag=LDO49_RS34320;partial=true;product=cytochrome c;protein_id=WP_224052793.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000287.1 RefSeq gene 1895 2605 . + . ID=gene-LDO49_RS34325;Name=LDO49_RS34325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34325;old_locus_tag=BCEP4_770002 NZ_CAJZAV010000287.1 Protein Homology CDS 1895 2605 . + 0 ID=cds-WP_048028930.1;Parent=gene-LDO49_RS34325;Dbxref=GenBank:WP_048028930.1;Name=WP_048028930.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184573.1;locus_tag=LDO49_RS34325;product=response regulator;protein_id=WP_048028930.1;transl_table=11 NZ_CAJZAV010000287.1 RefSeq gene 2663 3841 . - . ID=gene-LDO49_RS34330;Name=LDO49_RS34330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34330;old_locus_tag=BCEP4_770003 NZ_CAJZAV010000287.1 Protein Homology CDS 2663 3841 . - 0 ID=cds-WP_224052794.1;Parent=gene-LDO49_RS34330;Dbxref=GenBank:WP_224052794.1;Name=WP_224052794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349741.1;locus_tag=LDO49_RS34330;product=YncE family protein;protein_id=WP_224052794.1;transl_table=11 NZ_CAJZAV010000287.1 RefSeq gene 3903 4715 . - . ID=gene-LDO49_RS34335;Name=LDO49_RS34335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34335;old_locus_tag=BCEP4_770004 NZ_CAJZAV010000287.1 Protein Homology CDS 3903 4715 . - 0 ID=cds-WP_224052795.1;Parent=gene-LDO49_RS34335;Dbxref=GenBank:WP_224052795.1;Name=WP_224052795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349740.1;locus_tag=LDO49_RS34335;product=creatininase family protein;protein_id=WP_224052795.1;transl_table=11 NZ_CAJZAV010000287.1 RefSeq gene 4950 5348 . - . ID=gene-LDO49_RS34340;Name=LDO49_RS34340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34340;old_locus_tag=BCEP4_770005 NZ_CAJZAV010000287.1 Protein Homology CDS 4950 5348 . - 0 ID=cds-WP_048028936.1;Parent=gene-LDO49_RS34340;Dbxref=GenBank:WP_048028936.1;Name=WP_048028936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349739.1;locus_tag=LDO49_RS34340;product=RidA family protein;protein_id=WP_048028936.1;transl_table=11 NZ_CAJZAV010000287.1 RefSeq gene 5459 6235 . - . ID=gene-LDO49_RS34345;Name=benD;gbkey=Gene;gene=benD;gene_biotype=protein_coding;locus_tag=LDO49_RS34345;old_locus_tag=BCEP4_770006 NZ_CAJZAV010000287.1 Protein Homology CDS 5459 6235 . - 0 ID=cds-WP_021159134.1;Parent=gene-LDO49_RS34345;Dbxref=GenBank:WP_021159134.1;Name=WP_021159134.1;gbkey=CDS;gene=benD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336679.1;locus_tag=LDO49_RS34345;product=benzoate diol dehydrogenase BenD;protein_id=WP_021159134.1;transl_table=11 NZ_CAJZAV010000287.1 RefSeq gene 6232 7254 . - . ID=gene-LDO49_RS34350;Name=benC;gbkey=Gene;gene=benC;gene_biotype=protein_coding;locus_tag=LDO49_RS34350;old_locus_tag=BCEP4_770007 NZ_CAJZAV010000287.1 Protein Homology CDS 6232 7254 . - 0 ID=cds-WP_021159133.1;Parent=gene-LDO49_RS34350;Dbxref=GenBank:WP_021159133.1;Name=WP_021159133.1;gbkey=CDS;gene=benC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485361.1;locus_tag=LDO49_RS34350;product=benzoate 1%2C2-dioxygenase electron transfer component BenC;protein_id=WP_021159133.1;transl_table=11 NZ_CAJZAV010000287.1 RefSeq gene 7294 7782 . - . ID=gene-LDO49_RS34355;Name=benB;gbkey=Gene;gene=benB;gene_biotype=protein_coding;locus_tag=LDO49_RS34355;old_locus_tag=BCEP4_770008 NZ_CAJZAV010000287.1 Protein Homology CDS 7294 7782 . - 0 ID=cds-WP_027792559.1;Parent=gene-LDO49_RS34355;Dbxref=GenBank:WP_027792559.1;Name=WP_027792559.1;Ontology_term=GO:0008152;gbkey=CDS;gene=benB;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011695017.1;locus_tag=LDO49_RS34355;product=benzoate 1%2C2-dioxygenase small subunit;protein_id=WP_027792559.1;transl_table=11 NZ_CAJZAV010000287.1 RefSeq gene 7779 9137 . - . ID=gene-LDO49_RS34360;Name=LDO49_RS34360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34360;old_locus_tag=BCEP4_770009 NZ_CAJZAV010000287.1 Protein Homology CDS 7779 9137 . - 0 ID=cds-WP_224052796.1;Parent=gene-LDO49_RS34360;Dbxref=GenBank:WP_224052796.1;Name=WP_224052796.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661450.1;locus_tag=LDO49_RS34360;product=Rieske 2Fe-2S domain-containing protein;protein_id=WP_224052796.1;transl_table=11 NZ_CAJZAV010000287.1 RefSeq gene 9255 10199 . - . ID=gene-LDO49_RS34365;Name=catA;gbkey=Gene;gene=catA;gene_biotype=protein_coding;locus_tag=LDO49_RS34365;old_locus_tag=BCEP4_770010 NZ_CAJZAV010000287.1 Protein Homology CDS 9255 10199 . - 0 ID=cds-WP_224052797.1;Parent=gene-LDO49_RS34365;Dbxref=GenBank:WP_224052797.1;Name=WP_224052797.1;Ontology_term=GO:0019615,GO:0005506,GO:0018576;gbkey=CDS;gene=catA;go_function=iron ion binding|0005506||IEA,catechol 1%2C2-dioxygenase activity|0018576||IEA;go_process=catechol catabolic process%2C ortho-cleavage|0019615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008919234.1;locus_tag=LDO49_RS34365;product=catechol 1%2C2-dioxygenase;protein_id=WP_224052797.1;transl_table=11 NZ_CAJZAV010000287.1 RefSeq gene 10251 11387 . - . ID=gene-LDO49_RS34370;Name=LDO49_RS34370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34370;old_locus_tag=BCEP4_770011 NZ_CAJZAV010000287.1 Protein Homology CDS 10251 11387 . - 0 ID=cds-WP_059492719.1;Parent=gene-LDO49_RS34370;Dbxref=GenBank:WP_059492719.1;Name=WP_059492719.1;Ontology_term=GO:0018849,GO:0018850,GO:0030145;gbkey=CDS;go_function=muconate cycloisomerase activity|0018849||IEA,chloromuconate cycloisomerase activity|0018850||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413726.1;locus_tag=LDO49_RS34370;product=muconate/chloromuconate family cycloisomerase;protein_id=WP_059492719.1;transl_table=11 NZ_CAJZAV010000287.1 RefSeq gene 11503 11886 . - . ID=gene-LDO49_RS34375;Name=LDO49_RS34375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34375;old_locus_tag=BCEP4_770012 NZ_CAJZAV010000287.1 GeneMarkS-2+ CDS 11503 11886 . - 0 ID=cds-WP_124843689.1;Parent=gene-LDO49_RS34375;Dbxref=GenBank:WP_124843689.1;Name=WP_124843689.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS34375;product=hypothetical protein;protein_id=WP_124843689.1;transl_table=11 NZ_CAJZAV010000287.1 RefSeq gene 12151 13761 . + . ID=gene-LDO49_RS34380;Name=LDO49_RS34380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34380;old_locus_tag=BCEP4_770014 NZ_CAJZAV010000287.1 Protein Homology CDS 12151 13761 . + 0 ID=cds-WP_081079506.1;Parent=gene-LDO49_RS34380;Dbxref=GenBank:WP_081079506.1;Name=WP_081079506.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016834620.1;locus_tag=LDO49_RS34380;product=AAA family ATPase;protein_id=WP_081079506.1;transl_table=11 NZ_CAJZAV010000287.1 RefSeq pseudogene 14009 15046 . - . ID=gene-LDO49_RS34385;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=pseudogene;locus_tag=LDO49_RS34385;old_locus_tag=BCEP4_770018;partial=true;pseudo=true;start_range=.,14009 NZ_CAJZAV010000287.1 Protein Homology CDS 14009 15046 . - 0 ID=cds-LDO49_RS34385;Parent=gene-LDO49_RS34385;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899346.1;locus_tag=LDO49_RS34385;partial=true;product=threonine ammonia-lyase%2C biosynthetic;pseudo=true;start_range=.,14009;transl_table=11 NZ_CAJZAV010000287.1 RefSeq gene 15691 17094 . + . ID=gene-LDO49_RS34390;Name=LDO49_RS34390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34390;old_locus_tag=BCEP4_770019 NZ_CAJZAV010000287.1 Protein Homology CDS 15691 17094 . + 0 ID=cds-WP_081079505.1;Parent=gene-LDO49_RS34390;Dbxref=GenBank:WP_081079505.1;Name=WP_081079505.1;Ontology_term=GO:0009307,GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: protein motif:HMM:NF016362.6;locus_tag=LDO49_RS34390;product=restriction endonuclease;protein_id=WP_081079505.1;transl_table=11 NZ_CAJZAV010000287.1 RefSeq gene 17233 17466 . - . ID=gene-LDO49_RS34395;Name=LDO49_RS34395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34395;old_locus_tag=BCEP4_770020 NZ_CAJZAV010000287.1 Protein Homology CDS 17233 17466 . - 0 ID=cds-WP_009691834.1;Parent=gene-LDO49_RS34395;Dbxref=GenBank:WP_009691834.1;Name=WP_009691834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487081.1;locus_tag=LDO49_RS34395;product=hypothetical protein;protein_id=WP_009691834.1;transl_table=11 NZ_CAJZAV010000287.1 RefSeq gene 17869 17969 . + . ID=gene-LDO49_RS38410;Name=LDO49_RS38410;end_range=17969,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38410;partial=true NZ_CAJZAV010000287.1 Protein Homology CDS 17869 17969 . + 0 ID=cds-WP_443798024.1;Parent=gene-LDO49_RS38410;Dbxref=GenBank:WP_443798024.1;Name=WP_443798024.1;end_range=17969,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012398.6;locus_tag=LDO49_RS38410;partial=true;product=hypothetical protein;protein_id=WP_443798024.1;transl_table=11 NZ_CAJZAV010000287.1 RefSeq gene 17980 18201 . + . ID=gene-LDO49_RS34400;Name=LDO49_RS34400;end_range=18201,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34400;partial=true;start_range=.,17980 NZ_CAJZAV010000287.1 Protein Homology CDS 17980 18201 . + 0 ID=cds-WP_372585890.1;Parent=gene-LDO49_RS34400;Dbxref=GenBank:WP_372585890.1;Name=WP_372585890.1;Ontology_term=GO:0016491;end_range=18201,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498290.1;locus_tag=LDO49_RS34400;partial=true;product=aldehyde dehydrogenase family protein;protein_id=WP_372585890.1;start_range=.,17980;transl_table=11 ##sequence-region NZ_CAJZAV010000288.1 1 38142 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000288.1 RefSeq region 1 38142 . + . ID=NZ_CAJZAV010000288.1:1..38142;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_78 NZ_CAJZAV010000288.1 RefSeq gene 1 637 . - . ID=gene-LDO49_RS34405;Name=LDO49_RS34405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34405;partial=true;start_range=.,1 NZ_CAJZAV010000288.1 Protein Homology CDS 1 637 . - 0 ID=cds-WP_224052798.1;Parent=gene-LDO49_RS34405;Dbxref=GenBank:WP_224052798.1;Name=WP_224052798.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898409.1;locus_tag=LDO49_RS34405;partial=true;product=c-type cytochrome;protein_id=WP_224052798.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 698 1762 . - . ID=gene-LDO49_RS34410;Name=LDO49_RS34410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34410;old_locus_tag=BCEP4_780002 NZ_CAJZAV010000288.1 Protein Homology CDS 698 1762 . - 0 ID=cds-WP_059709144.1;Parent=gene-LDO49_RS34410;Dbxref=GenBank:WP_059709144.1;Name=WP_059709144.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA,ABC-type transporter activity|0140359||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659567.1;locus_tag=LDO49_RS34410;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_059709144.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 1771 2562 . - . ID=gene-LDO49_RS34415;Name=tetH;gbkey=Gene;gene=tetH;gene_biotype=protein_coding;locus_tag=LDO49_RS34415;old_locus_tag=BCEP4_780003 NZ_CAJZAV010000288.1 Protein Homology CDS 1771 2562 . - 0 ID=cds-WP_224052799.1;Parent=gene-LDO49_RS34415;Dbxref=GenBank:WP_224052799.1;Name=WP_224052799.1;gbkey=CDS;gene=tetH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495151.1;locus_tag=LDO49_RS34415;product=thiosulfate dehydrogenase;protein_id=WP_224052799.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 2951 3826 . + . ID=gene-LDO49_RS34420;Name=LDO49_RS34420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34420;old_locus_tag=BCEP4_780004 NZ_CAJZAV010000288.1 Protein Homology CDS 2951 3826 . + 0 ID=cds-WP_224052800.1;Parent=gene-LDO49_RS34420;Dbxref=GenBank:WP_224052800.1;Name=WP_224052800.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900589.1;locus_tag=LDO49_RS34420;product=LysR family transcriptional regulator;protein_id=WP_224052800.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 3860 5062 . - . ID=gene-LDO49_RS34425;Name=LDO49_RS34425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34425;old_locus_tag=BCEP4_780005 NZ_CAJZAV010000288.1 Protein Homology CDS 3860 5062 . - 0 ID=cds-WP_048025448.1;Parent=gene-LDO49_RS34425;Dbxref=GenBank:WP_048025448.1;Name=WP_048025448.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354026.1;locus_tag=LDO49_RS34425;product=multidrug effflux MFS transporter;protein_id=WP_048025448.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 5557 7725 . - . ID=gene-LDO49_RS34430;Name=LDO49_RS34430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34430;old_locus_tag=BCEP4_780007 NZ_CAJZAV010000288.1 Protein Homology CDS 5557 7725 . - 0 ID=cds-WP_060073223.1;Parent=gene-LDO49_RS34430;Dbxref=GenBank:WP_060073223.1;Name=WP_060073223.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757858.1;locus_tag=LDO49_RS34430;product=TonB-dependent siderophore receptor;protein_id=WP_060073223.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 8124 8570 . + . ID=gene-LDO49_RS34435;Name=LDO49_RS34435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34435;old_locus_tag=BCEP4_780008 NZ_CAJZAV010000288.1 Protein Homology CDS 8124 8570 . + 0 ID=cds-WP_059486996.1;Parent=gene-LDO49_RS34435;Dbxref=GenBank:WP_059486996.1;Name=WP_059486996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339429.1;locus_tag=LDO49_RS34435;product=hypothetical protein;protein_id=WP_059486996.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 8593 9699 . - . ID=gene-LDO49_RS34440;Name=LDO49_RS34440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34440;old_locus_tag=BCEP4_780009 NZ_CAJZAV010000288.1 Protein Homology CDS 8593 9699 . - 0 ID=cds-WP_060073221.1;Parent=gene-LDO49_RS34440;Dbxref=GenBank:WP_060073221.1;Name=WP_060073221.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757860.1;locus_tag=LDO49_RS34440;product=porin;protein_id=WP_060073221.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 9801 11144 . - . ID=gene-LDO49_RS34445;Name=LDO49_RS34445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34445;old_locus_tag=BCEP4_780010 NZ_CAJZAV010000288.1 Protein Homology CDS 9801 11144 . - 0 ID=cds-WP_021163011.1;Parent=gene-LDO49_RS34445;Dbxref=GenBank:WP_021163011.1;Name=WP_021163011.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659557.1;locus_tag=LDO49_RS34445;product=MFS transporter;protein_id=WP_021163011.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 11299 12354 . - . ID=gene-LDO49_RS34450;Name=LDO49_RS34450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34450;old_locus_tag=BCEP4_780011 NZ_CAJZAV010000288.1 Protein Homology CDS 11299 12354 . - 0 ID=cds-WP_060073219.1;Parent=gene-LDO49_RS34450;Dbxref=GenBank:WP_060073219.1;Name=WP_060073219.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366819.1;locus_tag=LDO49_RS34450;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_060073219.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 12419 13384 . - . ID=gene-LDO49_RS34455;Name=LDO49_RS34455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34455;old_locus_tag=BCEP4_780012 NZ_CAJZAV010000288.1 Protein Homology CDS 12419 13384 . - 0 ID=cds-WP_060073217.1;Parent=gene-LDO49_RS34455;Dbxref=GenBank:WP_060073217.1;Name=WP_060073217.1;Ontology_term=GO:0010181,GO:0016491,GO:0046872,GO:0051537;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495155.1;locus_tag=LDO49_RS34455;product=PDR/VanB family oxidoreductase;protein_id=WP_060073217.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 13381 14460 . - . ID=gene-LDO49_RS34460;Name=LDO49_RS34460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34460;old_locus_tag=BCEP4_780013 NZ_CAJZAV010000288.1 Protein Homology CDS 13381 14460 . - 0 ID=cds-WP_059648887.1;Parent=gene-LDO49_RS34460;Dbxref=GenBank:WP_059648887.1;Name=WP_059648887.1;Ontology_term=GO:0016491,GO:0051537;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480544.1;locus_tag=LDO49_RS34460;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_059648887.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 14660 15148 . + . ID=gene-LDO49_RS34465;Name=LDO49_RS34465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34465;old_locus_tag=BCEP4_780014 NZ_CAJZAV010000288.1 Protein Homology CDS 14660 15148 . + 0 ID=cds-WP_021163015.1;Parent=gene-LDO49_RS34465;Dbxref=GenBank:WP_021163015.1;Name=WP_021163015.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339432.1;locus_tag=LDO49_RS34465;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_021163015.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 15202 15948 . - . ID=gene-LDO49_RS34470;Name=LDO49_RS34470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34470;old_locus_tag=BCEP4_780015 NZ_CAJZAV010000288.1 Protein Homology CDS 15202 15948 . - 0 ID=cds-WP_021163016.1;Parent=gene-LDO49_RS34470;Dbxref=GenBank:WP_021163016.1;Name=WP_021163016.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898429.1;locus_tag=LDO49_RS34470;product=TetR/AcrR family transcriptional regulator;protein_id=WP_021163016.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 16119 17300 . + . ID=gene-LDO49_RS34475;Name=LDO49_RS34475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34475;old_locus_tag=BCEP4_780016 NZ_CAJZAV010000288.1 Protein Homology CDS 16119 17300 . + 0 ID=cds-WP_021163017.1;Parent=gene-LDO49_RS34475;Dbxref=GenBank:WP_021163017.1;Name=WP_021163017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724024.1;locus_tag=LDO49_RS34475;product=isovaleryl-CoA dehydrogenase;protein_id=WP_021163017.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 17332 18939 . + . ID=gene-LDO49_RS34480;Name=LDO49_RS34480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34480;old_locus_tag=BCEP4_780017 NZ_CAJZAV010000288.1 Protein Homology CDS 17332 18939 . + 0 ID=cds-WP_048025456.1;Parent=gene-LDO49_RS34480;Dbxref=GenBank:WP_048025456.1;Name=WP_048025456.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690312.1;locus_tag=LDO49_RS34480;product=carboxyl transferase domain-containing protein;protein_id=WP_048025456.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 18959 19744 . + . ID=gene-LDO49_RS34485;Name=LDO49_RS34485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34485;old_locus_tag=BCEP4_780018 NZ_CAJZAV010000288.1 Protein Homology CDS 18959 19744 . + 0 ID=cds-WP_059859779.1;Parent=gene-LDO49_RS34485;Dbxref=GenBank:WP_059859779.1;Name=WP_059859779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366812.1;locus_tag=LDO49_RS34485;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_059859779.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 19781 21778 . + . ID=gene-LDO49_RS34490;Name=LDO49_RS34490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34490;old_locus_tag=BCEP4_780019 NZ_CAJZAV010000288.1 Protein Homology CDS 19781 21778 . + 0 ID=cds-WP_060073215.1;Parent=gene-LDO49_RS34490;Dbxref=GenBank:WP_060073215.1;Name=WP_060073215.1;Ontology_term=GO:0004075,GO:0005524,GO:0016421,GO:0046872;gbkey=CDS;go_function=biotin carboxylase activity|0004075||IEA,ATP binding|0005524||IEA,CoA carboxylase activity|0016421||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480550.1;locus_tag=LDO49_RS34490;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=WP_060073215.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 22100 22303 . + . ID=gene-LDO49_RS34495;Name=LDO49_RS34495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34495;old_locus_tag=BCEP4_780020 NZ_CAJZAV010000288.1 Protein Homology CDS 22100 22303 . + 0 ID=cds-WP_021163021.1;Parent=gene-LDO49_RS34495;Dbxref=GenBank:WP_021163021.1;Name=WP_021163021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694854.1;locus_tag=LDO49_RS34495;product=hypothetical protein;protein_id=WP_021163021.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 22347 24461 . + . ID=gene-LDO49_RS34500;Name=LDO49_RS34500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34500;old_locus_tag=BCEP4_780021 NZ_CAJZAV010000288.1 Protein Homology CDS 22347 24461 . + 0 ID=cds-WP_021163022.1;Parent=gene-LDO49_RS34500;Dbxref=GenBank:WP_021163022.1;Name=WP_021163022.1;Ontology_term=GO:0034480;gbkey=CDS;go_function=phosphatidylcholine phospholipase C activity|0034480||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495158.1;locus_tag=LDO49_RS34500;product=phosphocholine-specific phospholipase C;protein_id=WP_021163022.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 24562 25260 . - . ID=gene-LDO49_RS34505;Name=LDO49_RS34505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34505;old_locus_tag=BCEP4_780022 NZ_CAJZAV010000288.1 Protein Homology CDS 24562 25260 . - 0 ID=cds-WP_060073213.1;Parent=gene-LDO49_RS34505;Dbxref=GenBank:WP_060073213.1;Name=WP_060073213.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: protein motif:HMM:NF024880.6;locus_tag=LDO49_RS34505;product=class I SAM-dependent methyltransferase;protein_id=WP_060073213.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 25575 26717 . + . ID=gene-LDO49_RS34510;Name=LDO49_RS34510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34510;old_locus_tag=BCEP4_780023 NZ_CAJZAV010000288.1 Protein Homology CDS 25575 26717 . + 0 ID=cds-WP_042977538.1;Parent=gene-LDO49_RS34510;Dbxref=GenBank:WP_042977538.1;Name=WP_042977538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480553.1;locus_tag=LDO49_RS34510;product=DUF2827 domain-containing protein;protein_id=WP_042977538.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 27290 27589 . - . ID=gene-LDO49_RS34515;Name=LDO49_RS34515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34515 NZ_CAJZAV010000288.1 GeneMarkS-2+ CDS 27290 27589 . - 0 ID=cds-WP_162175308.1;Parent=gene-LDO49_RS34515;Dbxref=GenBank:WP_162175308.1;Name=WP_162175308.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS34515;product=hypothetical protein;protein_id=WP_162175308.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 27503 28306 . + . ID=gene-LDO49_RS34520;Name=LDO49_RS34520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34520;old_locus_tag=BCEP4_780027 NZ_CAJZAV010000288.1 Protein Homology CDS 27503 28306 . + 0 ID=cds-WP_027790583.1;Parent=gene-LDO49_RS34520;Dbxref=GenBank:WP_027790583.1;Name=WP_027790583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366806.1;locus_tag=LDO49_RS34520;product=EAL domain-containing protein;protein_id=WP_027790583.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 28394 28816 . + . ID=gene-LDO49_RS34525;Name=LDO49_RS34525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34525;old_locus_tag=BCEP4_780028 NZ_CAJZAV010000288.1 Protein Homology CDS 28394 28816 . + 0 ID=cds-WP_081063994.1;Parent=gene-LDO49_RS34525;Dbxref=GenBank:WP_081063994.1;Name=WP_081063994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483232.1;locus_tag=LDO49_RS34525;product=hypothetical protein;protein_id=WP_081063994.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 28917 30884 . - . ID=gene-LDO49_RS34530;Name=LDO49_RS34530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34530;old_locus_tag=BCEP4_780029 NZ_CAJZAV010000288.1 Protein Homology CDS 28917 30884 . - 0 ID=cds-WP_224052801.1;Parent=gene-LDO49_RS34530;Dbxref=GenBank:WP_224052801.1;Name=WP_224052801.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493552.1;locus_tag=LDO49_RS34530;product=FkbM family methyltransferase;protein_id=WP_224052801.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 30908 32044 . - . ID=gene-LDO49_RS34535;Name=LDO49_RS34535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34535;old_locus_tag=BCEP4_780030 NZ_CAJZAV010000288.1 Protein Homology CDS 30908 32044 . - 0 ID=cds-WP_048025463.1;Parent=gene-LDO49_RS34535;Dbxref=GenBank:WP_048025463.1;Name=WP_048025463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331303.1;locus_tag=LDO49_RS34535;product=DUF2827 family protein;protein_id=WP_048025463.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 32075 32542 . - . ID=gene-LDO49_RS34540;Name=LDO49_RS34540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34540;old_locus_tag=BCEP4_780031 NZ_CAJZAV010000288.1 Protein Homology CDS 32075 32542 . - 0 ID=cds-WP_059553909.1;Parent=gene-LDO49_RS34540;Dbxref=GenBank:WP_059553909.1;Name=WP_059553909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482018.1;locus_tag=LDO49_RS34540;product=DUF4019 domain-containing protein;protein_id=WP_059553909.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 32569 33723 . - . ID=gene-LDO49_RS34545;Name=LDO49_RS34545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34545;old_locus_tag=BCEP4_780032 NZ_CAJZAV010000288.1 Protein Homology CDS 32569 33723 . - 0 ID=cds-WP_224052802.1;Parent=gene-LDO49_RS34545;Dbxref=GenBank:WP_224052802.1;Name=WP_224052802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898439.1;locus_tag=LDO49_RS34545;product=DUF2827 domain-containing protein;protein_id=WP_224052802.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 33738 34883 . - . ID=gene-LDO49_RS34550;Name=LDO49_RS34550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34550;old_locus_tag=BCEP4_780033 NZ_CAJZAV010000288.1 Protein Homology CDS 33738 34883 . - 0 ID=cds-WP_060073209.1;Parent=gene-LDO49_RS34550;Dbxref=GenBank:WP_060073209.1;Name=WP_060073209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216418.1;locus_tag=LDO49_RS34550;product=DUF2827 domain-containing protein;protein_id=WP_060073209.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 35278 35946 . - . ID=gene-LDO49_RS34555;Name=LDO49_RS34555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34555;old_locus_tag=BCEP4_780035 NZ_CAJZAV010000288.1 Protein Homology CDS 35278 35946 . - 0 ID=cds-WP_060073207.1;Parent=gene-LDO49_RS34555;Dbxref=GenBank:WP_060073207.1;Name=WP_060073207.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480561.1;locus_tag=LDO49_RS34555;product=OmpA family protein;protein_id=WP_060073207.1;transl_table=11 NZ_CAJZAV010000288.1 RefSeq gene 36071 38142 . - . ID=gene-LDO49_RS34560;Name=LDO49_RS34560;end_range=38142,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34560;old_locus_tag=BCEP4_780036;partial=true NZ_CAJZAV010000288.1 Protein Homology CDS 36071 38142 . - 2 ID=cds-WP_224052803.1;Parent=gene-LDO49_RS34560;Dbxref=GenBank:WP_224052803.1;Name=WP_224052803.1;Ontology_term=GO:0007155,GO:0015031;end_range=38142,.;gbkey=CDS;go_process=cell adhesion|0007155||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493550.1;locus_tag=LDO49_RS34560;partial=true;product=YadA family autotransporter adhesin;protein_id=WP_224052803.1;transl_table=11 ##sequence-region NZ_CAJZAV010000289.1 1 49198 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000289.1 RefSeq region 1 49198 . + . ID=NZ_CAJZAV010000289.1:1..49198;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_79 NZ_CAJZAV010000289.1 RefSeq gene 1 839 . + . ID=gene-LDO49_RS34565;Name=LDO49_RS34565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34565;old_locus_tag=BCEP4_790001;partial=true;start_range=.,1 NZ_CAJZAV010000289.1 Protein Homology CDS 1 839 . + 2 ID=cds-WP_224052804.1;Parent=gene-LDO49_RS34565;Dbxref=GenBank:WP_224052804.1;Name=WP_224052804.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349644.1;locus_tag=LDO49_RS34565;partial=true;product=aminotransferase-like domain-containing protein;protein_id=WP_224052804.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq pseudogene 991 1372 . - . ID=gene-LDO49_RS37680;Name=LDO49_RS37680;end_range=1372,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37680;partial=true;pseudo=true;start_range=.,991 NZ_CAJZAV010000289.1 Protein Homology CDS 991 1372 . - 0 ID=cds-LDO49_RS37680;Parent=gene-LDO49_RS37680;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1372,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732717.1;locus_tag=LDO49_RS37680;partial=true;product=IS6 family transposase;pseudo=true;start_range=.,991;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 1625 2548 . - . ID=gene-LDO49_RS34575;Name=LDO49_RS34575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34575;old_locus_tag=BCEP4_790003 NZ_CAJZAV010000289.1 Protein Homology CDS 1625 2548 . - 0 ID=cds-WP_042973774.1;Parent=gene-LDO49_RS34575;Dbxref=GenBank:WP_042973774.1;Name=WP_042973774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429987.1;locus_tag=LDO49_RS34575;product=recombination-associated protein RdgC;protein_id=WP_042973774.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 3014 3415 . + . ID=gene-LDO49_RS34580;Name=LDO49_RS34580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34580;old_locus_tag=BCEP4_790005 NZ_CAJZAV010000289.1 Protein Homology CDS 3014 3415 . + 0 ID=cds-WP_060147673.1;Parent=gene-LDO49_RS34580;Dbxref=GenBank:WP_060147673.1;Name=WP_060147673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012426578.1;locus_tag=LDO49_RS34580;product=hypothetical protein;protein_id=WP_060147673.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 3572 4591 . - . ID=gene-LDO49_RS34585;Name=LDO49_RS34585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34585;old_locus_tag=BCEP4_790006 NZ_CAJZAV010000289.1 Protein Homology CDS 3572 4591 . - 0 ID=cds-WP_021157905.1;Parent=gene-LDO49_RS34585;Dbxref=GenBank:WP_021157905.1;Name=WP_021157905.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010095821.1;locus_tag=LDO49_RS34585;product=AraC family transcriptional regulator;protein_id=WP_021157905.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 4607 5059 . - . ID=gene-LDO49_RS34590;Name=LDO49_RS34590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34590;old_locus_tag=BCEP4_790007 NZ_CAJZAV010000289.1 Protein Homology CDS 4607 5059 . - 0 ID=cds-WP_042973776.1;Parent=gene-LDO49_RS34590;Dbxref=GenBank:WP_042973776.1;Name=WP_042973776.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010095823.1;locus_tag=LDO49_RS34590;product=GNAT family N-acetyltransferase;protein_id=WP_042973776.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 5722 6567 . + . ID=gene-LDO49_RS34595;Name=LDO49_RS34595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34595;old_locus_tag=BCEP4_790010 NZ_CAJZAV010000289.1 Protein Homology CDS 5722 6567 . + 0 ID=cds-WP_124475936.1;Parent=gene-LDO49_RS34595;Dbxref=GenBank:WP_124475936.1;Name=WP_124475936.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532420.1;locus_tag=LDO49_RS34595;product=ABC transporter permease;protein_id=WP_124475936.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 6554 7405 . + . ID=gene-LDO49_RS34600;Name=LDO49_RS34600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34600;old_locus_tag=BCEP4_790011 NZ_CAJZAV010000289.1 Protein Homology CDS 6554 7405 . + 0 ID=cds-WP_059485996.1;Parent=gene-LDO49_RS34600;Dbxref=GenBank:WP_059485996.1;Name=WP_059485996.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009945809.1;locus_tag=LDO49_RS34600;product=ABC transporter permease;protein_id=WP_059485996.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 7402 8433 . + . ID=gene-LDO49_RS34605;Name=LDO49_RS34605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34605;old_locus_tag=BCEP4_790012 NZ_CAJZAV010000289.1 Protein Homology CDS 7402 8433 . + 0 ID=cds-WP_021157909.1;Parent=gene-LDO49_RS34605;Dbxref=GenBank:WP_021157909.1;Name=WP_021157909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010117669.1;locus_tag=LDO49_RS34605;product=extracellular solute-binding protein;protein_id=WP_021157909.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 8810 9160 . + . ID=gene-LDO49_RS34610;Name=LDO49_RS34610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34610;old_locus_tag=BCEP4_790014 NZ_CAJZAV010000289.1 Protein Homology CDS 8810 9160 . + 0 ID=cds-WP_059485994.1;Parent=gene-LDO49_RS34610;Dbxref=GenBank:WP_059485994.1;Name=WP_059485994.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099603.1;locus_tag=LDO49_RS34610;product=H-NS histone family protein;protein_id=WP_059485994.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 9860 10279 . + . ID=gene-LDO49_RS34615;Name=LDO49_RS34615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34615;old_locus_tag=BCEP4_790016 NZ_CAJZAV010000289.1 Protein Homology CDS 9860 10279 . + 0 ID=cds-WP_224052805.1;Parent=gene-LDO49_RS34615;Dbxref=GenBank:WP_224052805.1;Name=WP_224052805.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF024242.6;locus_tag=LDO49_RS34615;product=helix-turn-helix domain-containing protein;protein_id=WP_224052805.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 10466 10723 . - . ID=gene-LDO49_RS34620;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=LDO49_RS34620;old_locus_tag=BCEP4_790017 NZ_CAJZAV010000289.1 Protein Homology CDS 10466 10723 . - 0 ID=cds-WP_021157913.1;Parent=gene-LDO49_RS34620;Dbxref=GenBank:WP_021157913.1;Name=WP_021157913.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498429.1;locus_tag=LDO49_RS34620;product=molybdopterin converting factor subunit 1;protein_id=WP_021157913.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 10776 11348 . - . ID=gene-LDO49_RS34625;Name=LDO49_RS34625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34625;old_locus_tag=BCEP4_790018 NZ_CAJZAV010000289.1 Protein Homology CDS 10776 11348 . - 0 ID=cds-WP_059555827.1;Parent=gene-LDO49_RS34625;Dbxref=GenBank:WP_059555827.1;Name=WP_059555827.1;Ontology_term=GO:0006777,GO:0030366;gbkey=CDS;go_function=molybdopterin synthase activity|0030366||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398845.1;locus_tag=LDO49_RS34625;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_059555827.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 11395 12519 . - . ID=gene-LDO49_RS34630;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=LDO49_RS34630;old_locus_tag=BCEP4_790019 NZ_CAJZAV010000289.1 Protein Homology CDS 11395 12519 . - 0 ID=cds-WP_060088991.1;Parent=gene-LDO49_RS34630;Dbxref=GenBank:WP_060088991.1;Name=WP_060088991.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498427.1;locus_tag=LDO49_RS34630;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_060088991.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 12719 13933 . - . ID=gene-LDO49_RS34635;Name=LDO49_RS34635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34635;old_locus_tag=BCEP4_790020 NZ_CAJZAV010000289.1 Protein Homology CDS 12719 13933 . - 0 ID=cds-WP_060147675.1;Parent=gene-LDO49_RS34635;Dbxref=GenBank:WP_060147675.1;Name=WP_060147675.1;Ontology_term=GO:0006777,GO:0046872,GO:0061599;gbkey=CDS;go_function=metal ion binding|0046872||IEA,molybdopterin molybdotransferase activity|0061599||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545625.1;locus_tag=LDO49_RS34635;product=molybdopterin molybdotransferase MoeA;protein_id=WP_060147675.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 13933 14802 . - . ID=gene-LDO49_RS34640;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=LDO49_RS34640;old_locus_tag=BCEP4_790021 NZ_CAJZAV010000289.1 Protein Homology CDS 13933 14802 . - 0 ID=cds-WP_060147677.1;Parent=gene-LDO49_RS34640;Dbxref=GenBank:WP_060147677.1;Name=WP_060147677.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349657.1;locus_tag=LDO49_RS34640;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_060147677.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 15229 16629 . + . ID=gene-LDO49_RS34645;Name=LDO49_RS34645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34645;old_locus_tag=BCEP4_790023 NZ_CAJZAV010000289.1 Protein Homology CDS 15229 16629 . + 0 ID=cds-WP_021157919.1;Parent=gene-LDO49_RS34645;Dbxref=GenBank:WP_021157919.1;Name=WP_021157919.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498424.1;locus_tag=LDO49_RS34645;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_021157919.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 16633 17640 . + . ID=gene-LDO49_RS34650;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=LDO49_RS34650;old_locus_tag=BCEP4_790024 NZ_CAJZAV010000289.1 Protein Homology CDS 16633 17640 . + 0 ID=cds-WP_021157920.1;Parent=gene-LDO49_RS34650;Dbxref=GenBank:WP_021157920.1;Name=WP_021157920.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349659.1;locus_tag=LDO49_RS34650;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_021157920.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 17799 18719 . + . ID=gene-LDO49_RS34655;Name=LDO49_RS34655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34655;old_locus_tag=BCEP4_790025 NZ_CAJZAV010000289.1 Protein Homology CDS 17799 18719 . + 0 ID=cds-WP_021157921.1;Parent=gene-LDO49_RS34655;Dbxref=GenBank:WP_021157921.1;Name=WP_021157921.1;Ontology_term=GO:0005254;gbkey=CDS;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349660.1;locus_tag=LDO49_RS34655;product=bestrophin family protein;protein_id=WP_021157921.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 18791 19384 . + . ID=gene-LDO49_RS34660;Name=LDO49_RS34660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34660;old_locus_tag=BCEP4_790026 NZ_CAJZAV010000289.1 Protein Homology CDS 18791 19384 . + 0 ID=cds-WP_060147679.1;Parent=gene-LDO49_RS34660;Dbxref=GenBank:WP_060147679.1;Name=WP_060147679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349661.1;locus_tag=LDO49_RS34660;product=SMI1/KNR4 family protein;protein_id=WP_060147679.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 19419 19805 . + . ID=gene-LDO49_RS34665;Name=LDO49_RS34665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34665;old_locus_tag=BCEP4_790027 NZ_CAJZAV010000289.1 Protein Homology CDS 19419 19805 . + 0 ID=cds-WP_048028459.1;Parent=gene-LDO49_RS34665;Dbxref=GenBank:WP_048028459.1;Name=WP_048028459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753125.1;locus_tag=LDO49_RS34665;product=VOC family protein;protein_id=WP_048028459.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 19828 20160 . - . ID=gene-LDO49_RS34670;Name=LDO49_RS34670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34670;old_locus_tag=BCEP4_790028 NZ_CAJZAV010000289.1 GeneMarkS-2+ CDS 19828 20160 . - 0 ID=cds-WP_060147680.1;Parent=gene-LDO49_RS34670;Dbxref=GenBank:WP_060147680.1;Name=WP_060147680.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS34670;product=hypothetical protein;protein_id=WP_060147680.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 20652 21062 . + . ID=gene-LDO49_RS34675;Name=LDO49_RS34675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34675;old_locus_tag=BCEP4_790030 NZ_CAJZAV010000289.1 Protein Homology CDS 20652 21062 . + 0 ID=cds-WP_060147683.1;Parent=gene-LDO49_RS34675;Dbxref=GenBank:WP_060147683.1;Name=WP_060147683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349664.1;locus_tag=LDO49_RS34675;product=VOC family protein;protein_id=WP_060147683.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 21176 22189 . - . ID=gene-LDO49_RS34680;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=LDO49_RS34680;old_locus_tag=BCEP4_790031 NZ_CAJZAV010000289.1 Protein Homology CDS 21176 22189 . - 0 ID=cds-WP_059710743.1;Parent=gene-LDO49_RS34680;Dbxref=GenBank:WP_059710743.1;Name=WP_059710743.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660578.1;locus_tag=LDO49_RS34680;product=tryptophan--tRNA ligase;protein_id=WP_059710743.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 22399 22554 . - . ID=gene-LDO49_RS34685;Name=LDO49_RS34685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34685;old_locus_tag=BCEP4_790032 NZ_CAJZAV010000289.1 Protein Homology CDS 22399 22554 . - 0 ID=cds-WP_021157927.1;Parent=gene-LDO49_RS34685;Dbxref=GenBank:WP_021157927.1;Name=WP_021157927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481299.1;locus_tag=LDO49_RS34685;product=hypothetical protein;protein_id=WP_021157927.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 23483 25111 . + . ID=gene-LDO49_RS34690;Name=LDO49_RS34690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34690;old_locus_tag=BCEP4_790035 NZ_CAJZAV010000289.1 Protein Homology CDS 23483 25111 . + 0 ID=cds-WP_021157928.1;Parent=gene-LDO49_RS34690;Dbxref=GenBank:WP_021157928.1;Name=WP_021157928.1;Ontology_term=GO:0016491,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349676.1;locus_tag=LDO49_RS34690;product=tyrosinase family protein;protein_id=WP_021157928.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 25199 25630 . + . ID=gene-LDO49_RS34695;Name=LDO49_RS34695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34695;old_locus_tag=BCEP4_790036 NZ_CAJZAV010000289.1 Protein Homology CDS 25199 25630 . + 0 ID=cds-WP_027792478.1;Parent=gene-LDO49_RS34695;Dbxref=GenBank:WP_027792478.1;Name=WP_027792478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349677.1;locus_tag=LDO49_RS34695;product=hypothetical protein;protein_id=WP_027792478.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 25688 26401 . + . ID=gene-LDO49_RS34700;Name=LDO49_RS34700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34700;old_locus_tag=BCEP4_790037 NZ_CAJZAV010000289.1 GeneMarkS-2+ CDS 25688 26401 . + 0 ID=cds-WP_155638157.1;Parent=gene-LDO49_RS34700;Dbxref=GenBank:WP_155638157.1;Name=WP_155638157.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS34700;product=hypothetical protein;protein_id=WP_155638157.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 26788 27441 . + . ID=gene-LDO49_RS34705;Name=LDO49_RS34705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34705;old_locus_tag=BCEP4_790039 NZ_CAJZAV010000289.1 Protein Homology CDS 26788 27441 . + 0 ID=cds-WP_060147689.1;Parent=gene-LDO49_RS34705;Dbxref=GenBank:WP_060147689.1;Name=WP_060147689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498418.1;locus_tag=LDO49_RS34705;product=hypothetical protein;protein_id=WP_060147689.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 27550 27882 . + . ID=gene-LDO49_RS34710;Name=LDO49_RS34710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34710;old_locus_tag=BCEP4_790040 NZ_CAJZAV010000289.1 Protein Homology CDS 27550 27882 . + 0 ID=cds-WP_021157934.1;Parent=gene-LDO49_RS34710;Dbxref=GenBank:WP_021157934.1;Name=WP_021157934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349668.1;locus_tag=LDO49_RS34710;product=RebB family R body protein;protein_id=WP_021157934.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 28089 28463 . + . ID=gene-LDO49_RS34715;Name=LDO49_RS34715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34715;old_locus_tag=BCEP4_790041 NZ_CAJZAV010000289.1 Protein Homology CDS 28089 28463 . + 0 ID=cds-WP_021157935.1;Parent=gene-LDO49_RS34715;Dbxref=GenBank:WP_021157935.1;Name=WP_021157935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498416.1;locus_tag=LDO49_RS34715;product=RebB family R body protein;protein_id=WP_021157935.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 28669 28992 . + . ID=gene-LDO49_RS34720;Name=LDO49_RS34720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34720;old_locus_tag=BCEP4_790042 NZ_CAJZAV010000289.1 Protein Homology CDS 28669 28992 . + 0 ID=cds-WP_048028509.1;Parent=gene-LDO49_RS34720;Dbxref=GenBank:WP_048028509.1;Name=WP_048028509.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757152.1;locus_tag=LDO49_RS34720;product=RebB family R body protein;protein_id=WP_048028509.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 29069 29944 . - . ID=gene-LDO49_RS34725;Name=LDO49_RS34725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34725;old_locus_tag=BCEP4_790043 NZ_CAJZAV010000289.1 Protein Homology CDS 29069 29944 . - 0 ID=cds-WP_224052806.1;Parent=gene-LDO49_RS34725;Dbxref=GenBank:WP_224052806.1;Name=WP_224052806.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: protein motif:HMM:NF012257.6;locus_tag=LDO49_RS34725;product=Crp/Fnr family transcriptional regulator;protein_id=WP_224052806.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 30148 30705 . + . ID=gene-LDO49_RS34730;Name=LDO49_RS34730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34730;old_locus_tag=BCEP4_790044 NZ_CAJZAV010000289.1 Protein Homology CDS 30148 30705 . + 0 ID=cds-WP_060147693.1;Parent=gene-LDO49_RS34730;Dbxref=GenBank:WP_060147693.1;Name=WP_060147693.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757154.1;locus_tag=LDO49_RS34730;product=RNA polymerase sigma factor;protein_id=WP_060147693.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 30811 31104 . + . ID=gene-LDO49_RS34735;Name=LDO49_RS34735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34735;old_locus_tag=BCEP4_790045 NZ_CAJZAV010000289.1 Protein Homology CDS 30811 31104 . + 0 ID=cds-WP_021157938.1;Parent=gene-LDO49_RS34735;Dbxref=GenBank:WP_021157938.1;Name=WP_021157938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750343.1;locus_tag=LDO49_RS34735;product=RebB family R body protein;protein_id=WP_021157938.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 31128 31757 . + . ID=gene-LDO49_RS34740;Name=LDO49_RS34740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34740;old_locus_tag=BCEP4_790046 NZ_CAJZAV010000289.1 Protein Homology CDS 31128 31757 . + 0 ID=cds-WP_059853467.1;Parent=gene-LDO49_RS34740;Dbxref=GenBank:WP_059853467.1;Name=WP_059853467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656540.1;locus_tag=LDO49_RS34740;product=hypothetical protein;protein_id=WP_059853467.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 31915 32361 . + . ID=gene-LDO49_RS34745;Name=LDO49_RS34745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34745;old_locus_tag=BCEP4_790047 NZ_CAJZAV010000289.1 Protein Homology CDS 31915 32361 . + 0 ID=cds-WP_059816657.1;Parent=gene-LDO49_RS34745;Dbxref=GenBank:WP_059816657.1;Name=WP_059816657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334240.1;locus_tag=LDO49_RS34745;product=hypothetical protein;protein_id=WP_059816657.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 32589 33929 . + . ID=gene-LDO49_RS34750;Name=LDO49_RS34750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34750;old_locus_tag=BCEP4_790048 NZ_CAJZAV010000289.1 Protein Homology CDS 32589 33929 . + 0 ID=cds-WP_059485973.1;Parent=gene-LDO49_RS34750;Dbxref=GenBank:WP_059485973.1;Name=WP_059485973.1;Ontology_term=GO:0004497,GO:0016709,GO:0050660;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217841.1;locus_tag=LDO49_RS34750;product=flavin-containing monooxygenase;protein_id=WP_059485973.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 34015 34452 . + . ID=gene-LDO49_RS34755;Name=LDO49_RS34755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34755;old_locus_tag=BCEP4_790049 NZ_CAJZAV010000289.1 Protein Homology CDS 34015 34452 . + 0 ID=cds-WP_021157943.1;Parent=gene-LDO49_RS34755;Dbxref=GenBank:WP_021157943.1;Name=WP_021157943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761446.1;locus_tag=LDO49_RS34755;product=RidA family protein;protein_id=WP_021157943.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 34461 35138 . + . ID=gene-LDO49_RS34760;Name=LDO49_RS34760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34760;old_locus_tag=BCEP4_790050 NZ_CAJZAV010000289.1 Protein Homology CDS 34461 35138 . + 0 ID=cds-WP_060309304.1;Parent=gene-LDO49_RS34760;Dbxref=GenBank:WP_060309304.1;Name=WP_060309304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767485.1;locus_tag=LDO49_RS34760;product=DUF1028 domain-containing protein;protein_id=WP_060309304.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 35131 36294 . + . ID=gene-LDO49_RS34765;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=LDO49_RS34765;old_locus_tag=BCEP4_790051 NZ_CAJZAV010000289.1 Protein Homology CDS 35131 36294 . + 0 ID=cds-WP_224052807.1;Parent=gene-LDO49_RS34765;Dbxref=GenBank:WP_224052807.1;Name=WP_224052807.1;Ontology_term=GO:0006526,GO:0006592,GO:0008777;gbkey=CDS;gene=argE;go_function=acetylornithine deacetylase activity|0008777||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217842.1;locus_tag=LDO49_RS34765;product=acetylornithine deacetylase;protein_id=WP_224052807.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 36353 37276 . - . ID=gene-LDO49_RS34770;Name=LDO49_RS34770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34770;old_locus_tag=BCEP4_790052 NZ_CAJZAV010000289.1 Protein Homology CDS 36353 37276 . - 0 ID=cds-WP_042973786.1;Parent=gene-LDO49_RS34770;Dbxref=GenBank:WP_042973786.1;Name=WP_042973786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407376.1;locus_tag=LDO49_RS34770;product=LysR substrate-binding domain-containing protein;protein_id=WP_042973786.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 37679 39100 . + . ID=gene-LDO49_RS34775;Name=LDO49_RS34775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34775;old_locus_tag=BCEP4_790053 NZ_CAJZAV010000289.1 Protein Homology CDS 37679 39100 . + 0 ID=cds-WP_059485964.1;Parent=gene-LDO49_RS34775;Dbxref=GenBank:WP_059485964.1;Name=WP_059485964.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407378.1;locus_tag=LDO49_RS34775;product=purine-cytosine permease family protein;protein_id=WP_059485964.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 39238 41517 . - . ID=gene-LDO49_RS34780;Name=LDO49_RS34780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34780;old_locus_tag=BCEP4_790054 NZ_CAJZAV010000289.1 Protein Homology CDS 39238 41517 . - 0 ID=cds-WP_175850073.1;Parent=gene-LDO49_RS34780;Dbxref=GenBank:WP_175850073.1;Name=WP_175850073.1;Ontology_term=GO:0016491,GO:0030151,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372719.1;locus_tag=LDO49_RS34780;product=FdhF/YdeP family oxidoreductase;protein_id=WP_175850073.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 41642 44218 . - . ID=gene-LDO49_RS34785;Name=LDO49_RS34785;end_range=44218,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34785;old_locus_tag=BCEP4_790055;partial=true NZ_CAJZAV010000289.1 Protein Homology CDS 41642 44218 . - 0 ID=cds-WP_372585892.1;Parent=gene-LDO49_RS34785;Dbxref=GenBank:WP_372585892.1;Name=WP_372585892.1;Ontology_term=GO:0005524,GO:0016887;end_range=44218,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337539.1;locus_tag=LDO49_RS34785;partial=true;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=WP_372585892.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 44841 45110 . - . ID=gene-LDO49_RS34790;Name=LDO49_RS34790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34790;old_locus_tag=BCEP4_790056 NZ_CAJZAV010000289.1 Protein Homology CDS 44841 45110 . - 0 ID=cds-WP_027792496.1;Parent=gene-LDO49_RS34790;Dbxref=GenBank:WP_027792496.1;Name=WP_027792496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755575.1;locus_tag=LDO49_RS34790;product=hypothetical protein;protein_id=WP_027792496.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 45213 46028 . - . ID=gene-LDO49_RS34795;Name=LDO49_RS34795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34795;old_locus_tag=BCEP4_790057 NZ_CAJZAV010000289.1 Protein Homology CDS 45213 46028 . - 0 ID=cds-WP_021157952.1;Parent=gene-LDO49_RS34795;Dbxref=GenBank:WP_021157952.1;Name=WP_021157952.1;Ontology_term=GO:0140737;gbkey=CDS;go_component=encapsulin nanocompartment|0140737||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337541.1;locus_tag=LDO49_RS34795;product=family 1 encapsulin nanocompartment shell protein;protein_id=WP_021157952.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 46468 46857 . + . ID=gene-LDO49_RS34800;Name=LDO49_RS34800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34800;old_locus_tag=BCEP4_790059 NZ_CAJZAV010000289.1 Protein Homology CDS 46468 46857 . + 0 ID=cds-WP_021157953.1;Parent=gene-LDO49_RS34800;Dbxref=GenBank:WP_021157953.1;Name=WP_021157953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010095748.1;locus_tag=LDO49_RS34800;product=GIY-YIG nuclease family protein;protein_id=WP_021157953.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 47036 48097 . - . ID=gene-LDO49_RS34805;Name=LDO49_RS34805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34805;old_locus_tag=BCEP4_790060 NZ_CAJZAV010000289.1 Protein Homology CDS 47036 48097 . - 0 ID=cds-WP_060147704.1;Parent=gene-LDO49_RS34805;Dbxref=GenBank:WP_060147704.1;Name=WP_060147704.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349691.1;locus_tag=LDO49_RS34805;product=Dyp-type peroxidase;protein_id=WP_060147704.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq gene 48466 48821 . + . ID=gene-LDO49_RS34810;Name=LDO49_RS34810;end_range=48821,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34810;old_locus_tag=BCEP4_790062;partial=true NZ_CAJZAV010000289.1 Protein Homology CDS 48466 48821 . + 0 ID=cds-WP_224052809.1;Parent=gene-LDO49_RS34810;Dbxref=GenBank:WP_224052809.1;Name=WP_224052809.1;Ontology_term=GO:0006355,GO:0003700;end_range=48821,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349692.1;locus_tag=LDO49_RS34810;partial=true;product=LysR family transcriptional regulator;protein_id=WP_224052809.1;transl_table=11 NZ_CAJZAV010000289.1 RefSeq pseudogene 48832 48995 . + . ID=gene-LDO49_RS37455;Name=LDO49_RS37455;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37455;old_locus_tag=BCEP4_790063;partial=true;pseudo=true;start_range=.,48832 NZ_CAJZAV010000289.1 Protein Homology CDS 48832 48995 . + 2 ID=cds-LDO49_RS37455;Parent=gene-LDO49_RS37455;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660565.1;locus_tag=LDO49_RS37455;partial=true;product=phosphate-starvation-inducible protein PsiE;pseudo=true;start_range=.,48832;transl_table=11 ##sequence-region NZ_CAJZAV010000290.1 1 20116 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000290.1 RefSeq region 1 20116 . + . ID=NZ_CAJZAV010000290.1:1..20116;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_8 NZ_CAJZAV010000290.1 RefSeq gene 198 1364 . - . ID=gene-LDO49_RS34825;Name=LDO49_RS34825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34825;old_locus_tag=BCEP4_80001 NZ_CAJZAV010000290.1 Protein Homology CDS 198 1364 . - 0 ID=cds-WP_027791034.1;Parent=gene-LDO49_RS34825;Dbxref=GenBank:WP_027791034.1;Name=WP_027791034.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482818.1;locus_tag=LDO49_RS34825;product=glycosyltransferase family 4 protein;protein_id=WP_027791034.1;transl_table=11 NZ_CAJZAV010000290.1 RefSeq gene 1364 2548 . - . ID=gene-LDO49_RS34830;Name=LDO49_RS34830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34830;old_locus_tag=BCEP4_80002 NZ_CAJZAV010000290.1 Protein Homology CDS 1364 2548 . - 0 ID=cds-WP_059591699.1;Parent=gene-LDO49_RS34830;Dbxref=GenBank:WP_059591699.1;Name=WP_059591699.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529078.1;locus_tag=LDO49_RS34830;product=glycosyltransferase family 4 protein;protein_id=WP_059591699.1;transl_table=11 NZ_CAJZAV010000290.1 RefSeq gene 2545 4011 . - . ID=gene-LDO49_RS34835;Name=LDO49_RS34835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34835;old_locus_tag=BCEP4_80003 NZ_CAJZAV010000290.1 Protein Homology CDS 2545 4011 . - 0 ID=cds-WP_224052810.1;Parent=gene-LDO49_RS34835;Dbxref=GenBank:WP_224052810.1;Name=WP_224052810.1;Ontology_term=GO:0009103,GO:0008754,GO:0008755,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=O-antigen ligase activity|0008754||IEA,O antigen polymerase activity|0008755||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881540.1;locus_tag=LDO49_RS34835;product=O-antigen ligase family protein;protein_id=WP_224052810.1;transl_table=11 NZ_CAJZAV010000290.1 RefSeq gene 4022 5158 . - . ID=gene-LDO49_RS34840;Name=LDO49_RS34840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34840;old_locus_tag=BCEP4_80004 NZ_CAJZAV010000290.1 Protein Homology CDS 4022 5158 . - 0 ID=cds-WP_021163247.1;Parent=gene-LDO49_RS34840;Dbxref=GenBank:WP_021163247.1;Name=WP_021163247.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416882.1;locus_tag=LDO49_RS34840;product=glycosyltransferase family 4 protein;protein_id=WP_021163247.1;transl_table=11 NZ_CAJZAV010000290.1 RefSeq gene 5206 6165 . - . ID=gene-LDO49_RS34845;Name=LDO49_RS34845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34845;old_locus_tag=BCEP4_80005 NZ_CAJZAV010000290.1 Protein Homology CDS 5206 6165 . - 0 ID=cds-WP_060071344.1;Parent=gene-LDO49_RS34845;Dbxref=GenBank:WP_060071344.1;Name=WP_060071344.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482934.1;locus_tag=LDO49_RS34845;product=glycosyltransferase family 2 protein;protein_id=WP_060071344.1;transl_table=11 NZ_CAJZAV010000290.1 RefSeq gene 6230 8455 . - . ID=gene-LDO49_RS34850;Name=LDO49_RS34850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34850;old_locus_tag=BCEP4_80006 NZ_CAJZAV010000290.1 Protein Homology CDS 6230 8455 . - 0 ID=cds-WP_021163249.1;Parent=gene-LDO49_RS34850;Dbxref=GenBank:WP_021163249.1;Name=WP_021163249.1;Ontology_term=GO:0000271;gbkey=CDS;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765453.1;locus_tag=LDO49_RS34850;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_021163249.1;transl_table=11 NZ_CAJZAV010000290.1 RefSeq gene 8506 9684 . - . ID=gene-LDO49_RS34855;Name=LDO49_RS34855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34855;old_locus_tag=BCEP4_80007 NZ_CAJZAV010000290.1 Protein Homology CDS 8506 9684 . - 0 ID=cds-WP_021163250.1;Parent=gene-LDO49_RS34855;Dbxref=GenBank:WP_021163250.1;Name=WP_021163250.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009978106.1;locus_tag=LDO49_RS34855;product=polysaccharide biosynthesis/export family protein;protein_id=WP_021163250.1;transl_table=11 NZ_CAJZAV010000290.1 RefSeq gene 9678 10121 . - . ID=gene-LDO49_RS34860;Name=LDO49_RS34860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34860;old_locus_tag=BCEP4_80008 NZ_CAJZAV010000290.1 Protein Homology CDS 9678 10121 . - 0 ID=cds-WP_021163251.1;Parent=gene-LDO49_RS34860;Dbxref=GenBank:WP_021163251.1;Name=WP_021163251.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900072.1;locus_tag=LDO49_RS34860;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_021163251.1;transl_table=11 NZ_CAJZAV010000290.1 RefSeq gene 10152 11564 . - . ID=gene-LDO49_RS34865;Name=LDO49_RS34865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34865;old_locus_tag=BCEP4_80009 NZ_CAJZAV010000290.1 Protein Homology CDS 10152 11564 . - 0 ID=cds-WP_048022236.1;Parent=gene-LDO49_RS34865;Dbxref=GenBank:WP_048022236.1;Name=WP_048022236.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765450.1;locus_tag=LDO49_RS34865;product=UDP-glucose dehydrogenase family protein;protein_id=WP_048022236.1;transl_table=11 NZ_CAJZAV010000290.1 RefSeq gene 11638 13011 . - . ID=gene-LDO49_RS34870;Name=LDO49_RS34870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34870;old_locus_tag=BCEP4_80010 NZ_CAJZAV010000290.1 Protein Homology CDS 11638 13011 . - 0 ID=cds-WP_042977761.1;Parent=gene-LDO49_RS34870;Dbxref=GenBank:WP_042977761.1;Name=WP_042977761.1;Ontology_term=GO:0016780;gbkey=CDS;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525082.1;locus_tag=LDO49_RS34870;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_042977761.1;transl_table=11 NZ_CAJZAV010000290.1 RefSeq gene 13440 14966 . + . ID=gene-LDO49_RS34875;Name=LDO49_RS34875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34875;old_locus_tag=BCEP4_80011 NZ_CAJZAV010000290.1 Protein Homology CDS 13440 14966 . + 0 ID=cds-WP_059493574.1;Parent=gene-LDO49_RS34875;Dbxref=GenBank:WP_059493574.1;Name=WP_059493574.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399386.1;locus_tag=LDO49_RS34875;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_059493574.1;transl_table=11 NZ_CAJZAV010000290.1 RefSeq gene 15093 16034 . - . ID=gene-LDO49_RS34880;Name=LDO49_RS34880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34880;old_locus_tag=BCEP4_80012 NZ_CAJZAV010000290.1 Protein Homology CDS 15093 16034 . - 0 ID=cds-WP_021163253.1;Parent=gene-LDO49_RS34880;Dbxref=GenBank:WP_021163253.1;Name=WP_021163253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482942.1;locus_tag=LDO49_RS34880;product=transposase;protein_id=WP_021163253.1;transl_table=11 NZ_CAJZAV010000290.1 RefSeq gene 16780 17361 . - . ID=gene-LDO49_RS34885;Name=LDO49_RS34885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34885;old_locus_tag=BCEP4_80015 NZ_CAJZAV010000290.1 Protein Homology CDS 16780 17361 . - 0 ID=cds-WP_021163254.1;Parent=gene-LDO49_RS34885;Dbxref=GenBank:WP_021163254.1;Name=WP_021163254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900077.1;locus_tag=LDO49_RS34885;product=DUF3501 family protein;protein_id=WP_021163254.1;transl_table=11 NZ_CAJZAV010000290.1 RefSeq gene 17393 18730 . - . ID=gene-LDO49_RS34890;Name=LDO49_RS34890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34890;old_locus_tag=BCEP4_80016 NZ_CAJZAV010000290.1 Protein Homology CDS 17393 18730 . - 0 ID=cds-WP_060071343.1;Parent=gene-LDO49_RS34890;Dbxref=GenBank:WP_060071343.1;Name=WP_060071343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190664.1;locus_tag=LDO49_RS34890;product=heterodisulfide reductase-related iron-sulfur binding cluster;protein_id=WP_060071343.1;transl_table=11 NZ_CAJZAV010000290.1 RefSeq gene 18850 19272 . - . ID=gene-LDO49_RS34895;Name=LDO49_RS34895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34895;old_locus_tag=BCEP4_80017 NZ_CAJZAV010000290.1 Protein Homology CDS 18850 19272 . - 0 ID=cds-WP_006497294.1;Parent=gene-LDO49_RS34895;Dbxref=GenBank:WP_006497294.1;Name=WP_006497294.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190903.1;locus_tag=LDO49_RS34895;product=rubrerythrin family protein;protein_id=WP_006497294.1;transl_table=11 NZ_CAJZAV010000290.1 RefSeq pseudogene 19581 19781 . - . ID=gene-LDO49_RS38415;Name=LDO49_RS38415;end_range=19781,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38415;old_locus_tag=BCEP4_80018;partial=true;pseudo=true NZ_CAJZAV010000290.1 Protein Homology CDS 19581 19781 . - 0 ID=cds-LDO49_RS38415;Parent=gene-LDO49_RS38415;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=19781,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217478.1;locus_tag=LDO49_RS38415;partial=true;product=RNA polymerase subunit sigma-24;pseudo=true;transl_table=11 NZ_CAJZAV010000290.1 RefSeq gene 19792 20116 . - . ID=gene-LDO49_RS38420;Name=LDO49_RS38420;end_range=20116,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38420;old_locus_tag=BCEP4_80019;partial=true;start_range=.,19792 NZ_CAJZAV010000290.1 Protein Homology CDS 19792 20116 . - 0 ID=cds-WP_443798025.1;Parent=gene-LDO49_RS38420;Dbxref=GenBank:WP_443798025.1;Name=WP_443798025.1;end_range=20116,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548203.1;locus_tag=LDO49_RS38420;partial=true;product=DUF6596 domain-containing protein;protein_id=WP_443798025.1;start_range=.,19792;transl_table=11 ##sequence-region NZ_CAJZAV010000291.1 1 53503 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000291.1 RefSeq region 1 53503 . + . ID=NZ_CAJZAV010000291.1:1..53503;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_80 NZ_CAJZAV010000291.1 RefSeq pseudogene 1 364 . + . ID=gene-LDO49_RS38425;Name=flhF;end_range=364,.;gbkey=Gene;gene=flhF;gene_biotype=pseudogene;locus_tag=LDO49_RS38425;old_locus_tag=BCEP4_800001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000291.1 Protein Homology CDS 1 364 . + 1 ID=cds-LDO49_RS38425;Parent=gene-LDO49_RS38425;Note=positive regulator of class III flagellar genes%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=364,.;gbkey=CDS;gene=flhF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546704.1;locus_tag=LDO49_RS38425;partial=true;product=flagellar biosynthesis protein FlhF;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq pseudogene 375 1077 . + . ID=gene-LDO49_RS34905;Name=flhF;gbkey=Gene;gene=flhF;gene_biotype=pseudogene;locus_tag=LDO49_RS34905;old_locus_tag=BCEP4_800002;partial=true;pseudo=true;start_range=.,375 NZ_CAJZAV010000291.1 Protein Homology CDS 375 1077 . + 1 ID=cds-LDO49_RS34905;Parent=gene-LDO49_RS34905;Note=positive regulator of class III flagellar genes%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;gene=flhF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546704.1;locus_tag=LDO49_RS34905;partial=true;product=flagellar biosynthesis protein FlhF;pseudo=true;start_range=.,375;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 1070 1888 . + . ID=gene-LDO49_RS34910;Name=LDO49_RS34910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34910;old_locus_tag=BCEP4_800003 NZ_CAJZAV010000291.1 Protein Homology CDS 1070 1888 . + 0 ID=cds-WP_124475347.1;Parent=gene-LDO49_RS34910;Dbxref=GenBank:WP_124475347.1;Name=WP_124475347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198637.1;locus_tag=LDO49_RS34910;product=nucleotide-binding protein;protein_id=WP_124475347.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 1911 2645 . + . ID=gene-LDO49_RS34915;Name=LDO49_RS34915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34915;old_locus_tag=BCEP4_800004 NZ_CAJZAV010000291.1 Protein Homology CDS 1911 2645 . + 0 ID=cds-WP_006484033.1;Parent=gene-LDO49_RS34915;Dbxref=GenBank:WP_006484033.1;Name=WP_006484033.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023809.1;locus_tag=LDO49_RS34915;product=RNA polymerase sigma factor FliA;protein_id=WP_006484033.1;transl_table=11 NZ_CAJZAV010000291.1 cmsearch riboswitch 2745 2870 . + . ID=id-NZ_CAJZAV010000291.1:2745..2870;Dbxref=RFAM:RF01057;Note=S-adenosyl-L-homocysteine riboswitch;bound_moiety=S-adenosyl-L-homocysteine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAV010000291.1 RefSeq gene 2903 4321 . + . ID=gene-LDO49_RS34920;Name=ahcY;gbkey=Gene;gene=ahcY;gene_biotype=protein_coding;locus_tag=LDO49_RS34920;old_locus_tag=BCEP4_800006 NZ_CAJZAV010000291.1 Protein Homology CDS 2903 4321 . + 0 ID=cds-WP_021163903.1;Parent=gene-LDO49_RS34920;Dbxref=GenBank:WP_021163903.1;Name=WP_021163903.1;Ontology_term=GO:0006730,GO:0004013;gbkey=CDS;gene=ahcY;go_function=adenosylhomocysteinase activity|0004013||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401380.1;locus_tag=LDO49_RS34920;product=adenosylhomocysteinase;protein_id=WP_021163903.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 4484 4837 . + . ID=gene-LDO49_RS34925;Name=LDO49_RS34925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34925;old_locus_tag=BCEP4_800007 NZ_CAJZAV010000291.1 Protein Homology CDS 4484 4837 . + 0 ID=cds-WP_006477367.1;Parent=gene-LDO49_RS34925;Dbxref=GenBank:WP_006477367.1;Name=WP_006477367.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906537.1;locus_tag=LDO49_RS34925;product=phage holin family protein;protein_id=WP_006477367.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 4863 5693 . + . ID=gene-LDO49_RS34930;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=LDO49_RS34930;old_locus_tag=BCEP4_800008 NZ_CAJZAV010000291.1 Protein Homology CDS 4863 5693 . + 0 ID=cds-WP_021164275.1;Parent=gene-LDO49_RS34930;Dbxref=GenBank:WP_021164275.1;Name=WP_021164275.1;Ontology_term=GO:0009086,GO:0004489,GO:0005829;gbkey=CDS;gene=metF;go_component=cytosol|0005829||IEA;go_function=methylenetetrahydrofolate reductase [NAD(P)H] activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762887.1;locus_tag=LDO49_RS34930;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=WP_021164275.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 5783 7264 . - . ID=gene-LDO49_RS34935;Name=LDO49_RS34935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34935;old_locus_tag=BCEP4_800009 NZ_CAJZAV010000291.1 Protein Homology CDS 5783 7264 . - 0 ID=cds-WP_059649939.1;Parent=gene-LDO49_RS34935;Dbxref=GenBank:WP_059649939.1;Name=WP_059649939.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895580.1;locus_tag=LDO49_RS34935;product=amidase;protein_id=WP_059649939.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 7346 8038 . - . ID=gene-LDO49_RS34940;Name=LDO49_RS34940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34940;old_locus_tag=BCEP4_800010 NZ_CAJZAV010000291.1 Protein Homology CDS 7346 8038 . - 0 ID=cds-WP_059490231.1;Parent=gene-LDO49_RS34940;Dbxref=GenBank:WP_059490231.1;Name=WP_059490231.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009974414.1;locus_tag=LDO49_RS34940;product=dienelactone hydrolase family protein;protein_id=WP_059490231.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq pseudogene 8319 8923 . + . ID=gene-LDO49_RS38430;Name=LDO49_RS38430;end_range=8923,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38430;old_locus_tag=BCEP4_800012;partial=true;pseudo=true NZ_CAJZAV010000291.1 Protein Homology CDS 8319 8923 . + 0 ID=cds-LDO49_RS38430;Parent=gene-LDO49_RS38430;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0004497,GO:0010181,GO:0016703;end_range=8923,.;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655701.1;locus_tag=LDO49_RS38430;partial=true;product=NAD(P)H-dependent flavin oxidoreductase;pseudo=true;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 8934 9375 . + . ID=gene-LDO49_RS38435;Name=LDO49_RS38435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38435;old_locus_tag=BCEP4_800013;partial=true;start_range=.,8934 NZ_CAJZAV010000291.1 Protein Homology CDS 8934 9375 . + 1 ID=cds-WP_443798026.1;Parent=gene-LDO49_RS38435;Dbxref=GenBank:WP_443798026.1;Name=WP_443798026.1;Ontology_term=GO:0004497,GO:0010181,GO:0016703;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA,oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)|0016703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546697.1;locus_tag=LDO49_RS38435;partial=true;product=NAD(P)H-dependent flavin oxidoreductase;protein_id=WP_443798026.1;start_range=.,8934;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 9791 10933 . + . ID=gene-LDO49_RS34950;Name=LDO49_RS34950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34950;old_locus_tag=BCEP4_800014 NZ_CAJZAV010000291.1 Protein Homology CDS 9791 10933 . + 0 ID=cds-WP_027788629.1;Parent=gene-LDO49_RS34950;Dbxref=GenBank:WP_027788629.1;Name=WP_027788629.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195762.1;locus_tag=LDO49_RS34950;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_027788629.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 11038 12255 . - . ID=gene-LDO49_RS34955;Name=LDO49_RS34955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34955;old_locus_tag=BCEP4_800015 NZ_CAJZAV010000291.1 Protein Homology CDS 11038 12255 . - 0 ID=cds-WP_224052811.1;Parent=gene-LDO49_RS34955;Dbxref=GenBank:WP_224052811.1;Name=WP_224052811.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753864.1;locus_tag=LDO49_RS34955;product=MFS transporter;protein_id=WP_224052811.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 12496 13155 . + . ID=gene-LDO49_RS34960;Name=LDO49_RS34960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34960;old_locus_tag=BCEP4_800016 NZ_CAJZAV010000291.1 Protein Homology CDS 12496 13155 . + 0 ID=cds-WP_059857607.1;Parent=gene-LDO49_RS34960;Dbxref=GenBank:WP_059857607.1;Name=WP_059857607.1;Ontology_term=GO:0004733,GO:0010181;gbkey=CDS;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327717.1;locus_tag=LDO49_RS34960;product=HugZ family pyridoxamine 5'-phosphate oxidase;protein_id=WP_059857607.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 13521 13814 . + . ID=gene-LDO49_RS34965;Name=LDO49_RS34965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34965;old_locus_tag=BCEP4_800018 NZ_CAJZAV010000291.1 Protein Homology CDS 13521 13814 . + 0 ID=cds-WP_006491875.1;Parent=gene-LDO49_RS34965;Dbxref=GenBank:WP_006491875.1;Name=WP_006491875.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696300.1;locus_tag=LDO49_RS34965;product=H-NS histone family protein;protein_id=WP_006491875.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 14058 15215 . + . ID=gene-LDO49_RS34970;Name=LDO49_RS34970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34970;old_locus_tag=BCEP4_800019 NZ_CAJZAV010000291.1 Protein Homology CDS 14058 15215 . + 0 ID=cds-WP_060073630.1;Parent=gene-LDO49_RS34970;Dbxref=GenBank:WP_060073630.1;Name=WP_060073630.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212529.1;locus_tag=LDO49_RS34970;product=cation diffusion facilitator family transporter;protein_id=WP_060073630.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 15259 15729 . - . ID=gene-LDO49_RS34975;Name=LDO49_RS34975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34975;old_locus_tag=BCEP4_800020 NZ_CAJZAV010000291.1 Protein Homology CDS 15259 15729 . - 0 ID=cds-WP_006477376.1;Parent=gene-LDO49_RS34975;Dbxref=GenBank:WP_006477376.1;Name=WP_006477376.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016346759.1;locus_tag=LDO49_RS34975;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_006477376.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 15809 16468 . - . ID=gene-LDO49_RS34980;Name=LDO49_RS34980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34980;old_locus_tag=BCEP4_800021 NZ_CAJZAV010000291.1 Protein Homology CDS 15809 16468 . - 0 ID=cds-WP_021158625.1;Parent=gene-LDO49_RS34980;Dbxref=GenBank:WP_021158625.1;Name=WP_021158625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895588.1;locus_tag=LDO49_RS34980;product=glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_021158625.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 16465 17109 . - . ID=gene-LDO49_RS34985;Name=LDO49_RS34985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34985;old_locus_tag=BCEP4_800022 NZ_CAJZAV010000291.1 Protein Homology CDS 16465 17109 . - 0 ID=cds-WP_021158624.1;Parent=gene-LDO49_RS34985;Dbxref=GenBank:WP_021158624.1;Name=WP_021158624.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010107034.1;locus_tag=LDO49_RS34985;product=MBL fold metallo-hydrolase;protein_id=WP_021158624.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 17767 18378 . + . ID=gene-LDO49_RS34990;Name=LDO49_RS34990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS34990;old_locus_tag=BCEP4_800024 NZ_CAJZAV010000291.1 Protein Homology CDS 17767 18378 . + 0 ID=cds-WP_027788623.1;Parent=gene-LDO49_RS34990;Dbxref=GenBank:WP_027788623.1;Name=WP_027788623.1;Ontology_term=GO:0071555,GO:0008932;gbkey=CDS;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401362.1;locus_tag=LDO49_RS34990;product=septal ring lytic transglycosylase RlpA family protein;protein_id=WP_027788623.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 18487 19368 . - . ID=gene-LDO49_RS34995;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=LDO49_RS34995;old_locus_tag=BCEP4_800025 NZ_CAJZAV010000291.1 Protein Homology CDS 18487 19368 . - 0 ID=cds-WP_048025325.1;Parent=gene-LDO49_RS34995;Dbxref=GenBank:WP_048025325.1;Name=WP_048025325.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350625.1;locus_tag=LDO49_RS34995;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_048025325.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 19415 19843 . + . ID=gene-LDO49_RS35000;Name=LDO49_RS35000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35000;old_locus_tag=BCEP4_800026 NZ_CAJZAV010000291.1 Protein Homology CDS 19415 19843 . + 0 ID=cds-WP_042974155.1;Parent=gene-LDO49_RS35000;Dbxref=GenBank:WP_042974155.1;Name=WP_042974155.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546685.1;locus_tag=LDO49_RS35000;product=YraN family protein;protein_id=WP_042974155.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 19970 20554 . + . ID=gene-LDO49_RS35005;Name=LDO49_RS35005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35005;old_locus_tag=BCEP4_800027 NZ_CAJZAV010000291.1 Protein Homology CDS 19970 20554 . + 0 ID=cds-WP_060062398.1;Parent=gene-LDO49_RS35005;Dbxref=GenBank:WP_060062398.1;Name=WP_060062398.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493587.1;locus_tag=LDO49_RS35005;product=SIS domain-containing protein;protein_id=WP_060062398.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 20572 21369 . + . ID=gene-LDO49_RS35010;Name=LDO49_RS35010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35010;old_locus_tag=BCEP4_800028 NZ_CAJZAV010000291.1 Protein Homology CDS 20572 21369 . + 0 ID=cds-WP_027788619.1;Parent=gene-LDO49_RS35010;Dbxref=GenBank:WP_027788619.1;Name=WP_027788619.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212533.1;locus_tag=LDO49_RS35010;product=BON domain-containing protein;protein_id=WP_027788619.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 21366 21728 . + . ID=gene-LDO49_RS35015;Name=LDO49_RS35015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35015;old_locus_tag=BCEP4_800029 NZ_CAJZAV010000291.1 Protein Homology CDS 21366 21728 . + 0 ID=cds-WP_021158617.1;Parent=gene-LDO49_RS35015;Dbxref=GenBank:WP_021158617.1;Name=WP_021158617.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753795.1;locus_tag=LDO49_RS35015;product=c-type cytochrome;protein_id=WP_021158617.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 21795 21870 . + . ID=gene-LDO49_RS35020;Name=LDO49_RS35020;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS35020;old_locus_tag=BCEP4_TRNA16 NZ_CAJZAV010000291.1 tRNAscan-SE tRNA 21795 21870 . + . ID=rna-LDO49_RS35020;Parent=gene-LDO49_RS35020;anticodon=(pos:21828..21830);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS35020;product=tRNA-Ala NZ_CAJZAV010000291.1 tRNAscan-SE exon 21795 21870 . + . ID=exon-LDO49_RS35020-1;Parent=rna-LDO49_RS35020;anticodon=(pos:21828..21830);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS35020;product=tRNA-Ala NZ_CAJZAV010000291.1 RefSeq gene 22124 22417 . + . ID=gene-LDO49_RS35025;Name=LDO49_RS35025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35025 NZ_CAJZAV010000291.1 Protein Homology CDS 22124 22417 . + 0 ID=cds-WP_443798027.1;Parent=gene-LDO49_RS35025;Dbxref=GenBank:WP_443798027.1;Name=WP_443798027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009938895.1;locus_tag=LDO49_RS35025;product=DNA-binding protein;protein_id=WP_443798027.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 22544 23419 . + . ID=gene-LDO49_RS35030;Name=trfA;gbkey=Gene;gene=trfA;gene_biotype=protein_coding;locus_tag=LDO49_RS35030;old_locus_tag=BCEP4_800030 NZ_CAJZAV010000291.1 Protein Homology CDS 22544 23419 . + 0 ID=cds-WP_224052813.1;Parent=gene-LDO49_RS35030;Dbxref=GenBank:WP_224052813.1;Name=WP_224052813.1;gbkey=CDS;gene=trfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011799431.1;locus_tag=LDO49_RS35030;product=plasmid replication initiator TrfA;protein_id=WP_224052813.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 23959 24312 . - . ID=gene-LDO49_RS35035;Name=LDO49_RS35035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35035;old_locus_tag=BCEP4_800032 NZ_CAJZAV010000291.1 GeneMarkS-2+ CDS 23959 24312 . - 0 ID=cds-WP_224052814.1;Parent=gene-LDO49_RS35035;Dbxref=GenBank:WP_224052814.1;Name=WP_224052814.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS35035;product=hypothetical protein;protein_id=WP_224052814.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 24513 25295 . - . ID=gene-LDO49_RS35040;Name=LDO49_RS35040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35040;old_locus_tag=BCEP4_800033 NZ_CAJZAV010000291.1 GeneMarkS-2+ CDS 24513 25295 . - 0 ID=cds-WP_224052815.1;Parent=gene-LDO49_RS35040;Dbxref=GenBank:WP_224052815.1;Name=WP_224052815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS35040;product=hypothetical protein;protein_id=WP_224052815.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 25453 25650 . + . ID=gene-LDO49_RS35045;Name=LDO49_RS35045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35045;old_locus_tag=BCEP4_800034 NZ_CAJZAV010000291.1 Protein Homology CDS 25453 25650 . + 0 ID=cds-WP_224052816.1;Parent=gene-LDO49_RS35045;Dbxref=GenBank:WP_224052816.1;Name=WP_224052816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009938888.1;locus_tag=LDO49_RS35045;product=hypothetical protein;protein_id=WP_224052816.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 25647 25886 . + . ID=gene-LDO49_RS35050;Name=LDO49_RS35050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35050;old_locus_tag=BCEP4_800035 NZ_CAJZAV010000291.1 GeneMarkS-2+ CDS 25647 25886 . + 0 ID=cds-WP_224052817.1;Parent=gene-LDO49_RS35050;Dbxref=GenBank:WP_224052817.1;Name=WP_224052817.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS35050;product=hypothetical protein;protein_id=WP_224052817.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 26201 26563 . + . ID=gene-LDO49_RS35055;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=LDO49_RS35055;old_locus_tag=BCEP4_800036 NZ_CAJZAV010000291.1 Protein Homology CDS 26201 26563 . + 0 ID=cds-WP_224052818.1;Parent=gene-LDO49_RS35055;Dbxref=GenBank:WP_224052818.1;Name=WP_224052818.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483345.1;locus_tag=LDO49_RS35055;product=conjugal transfer transcriptional regulator TraJ;protein_id=WP_224052818.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 26684 27451 . + . ID=gene-LDO49_RS35060;Name=trbJ;gbkey=Gene;gene=trbJ;gene_biotype=protein_coding;locus_tag=LDO49_RS35060;old_locus_tag=BCEP4_800037 NZ_CAJZAV010000291.1 Protein Homology CDS 26684 27451 . + 0 ID=cds-WP_224052819.1;Parent=gene-LDO49_RS35060;Dbxref=GenBank:WP_224052819.1;Name=WP_224052819.1;gbkey=CDS;gene=trbJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483348.1;locus_tag=LDO49_RS35060;product=P-type conjugative transfer protein TrbJ;protein_id=WP_224052819.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 27655 29079 . + . ID=gene-LDO49_RS35065;Name=trbL;gbkey=Gene;gene=trbL;gene_biotype=protein_coding;locus_tag=LDO49_RS35065;old_locus_tag=BCEP4_800038 NZ_CAJZAV010000291.1 Protein Homology CDS 27655 29079 . + 0 ID=cds-WP_224052820.1;Parent=gene-LDO49_RS35065;Dbxref=GenBank:WP_224052820.1;Name=WP_224052820.1;Ontology_term=GO:0009291;gbkey=CDS;gene=trbL;go_process=unidirectional conjugation|0009291||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017423591.1;locus_tag=LDO49_RS35065;product=P-type conjugative transfer protein TrbL;protein_id=WP_224052820.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 29154 29435 . + . ID=gene-LDO49_RS35070;Name=LDO49_RS35070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35070;old_locus_tag=BCEP4_800039 NZ_CAJZAV010000291.1 Protein Homology CDS 29154 29435 . + 0 ID=cds-WP_224052832.1;Parent=gene-LDO49_RS35070;Dbxref=GenBank:WP_224052832.1;Name=WP_224052832.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024115.6;locus_tag=LDO49_RS35070;product=type I toxin-antitoxin system ptaRNA1 family toxin;protein_id=WP_224052832.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 29432 29764 . + . ID=gene-LDO49_RS35075;Name=LDO49_RS35075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35075;old_locus_tag=BCEP4_800040 NZ_CAJZAV010000291.1 Protein Homology CDS 29432 29764 . + 0 ID=cds-WP_224052821.1;Parent=gene-LDO49_RS35075;Dbxref=GenBank:WP_224052821.1;Name=WP_224052821.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011205279.1;locus_tag=LDO49_RS35075;product=HigA family addiction module antitoxin;protein_id=WP_224052821.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 30161 30517 . + . ID=gene-LDO49_RS35080;Name=LDO49_RS35080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35080;old_locus_tag=BCEP4_800042 NZ_CAJZAV010000291.1 GeneMarkS-2+ CDS 30161 30517 . + 0 ID=cds-WP_224052822.1;Parent=gene-LDO49_RS35080;Dbxref=GenBank:WP_224052822.1;Name=WP_224052822.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS35080;product=hypothetical protein;protein_id=WP_224052822.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 30520 30903 . + . ID=gene-LDO49_RS35085;Name=LDO49_RS35085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35085;old_locus_tag=BCEP4_800043 NZ_CAJZAV010000291.1 Protein Homology CDS 30520 30903 . + 0 ID=cds-WP_224052823.1;Parent=gene-LDO49_RS35085;Dbxref=GenBank:WP_224052823.1;Name=WP_224052823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009961788.1;locus_tag=LDO49_RS35085;product=DUF2513 domain-containing protein;protein_id=WP_224052823.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq pseudogene 30935 31879 . + . ID=gene-LDO49_RS35090;Name=LDO49_RS35090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS35090;old_locus_tag=BCEP4_800045;pseudo=true NZ_CAJZAV010000291.1 Protein Homology CDS 30935 31879 . + 0 ID=cds-LDO49_RS35090;Parent=gene-LDO49_RS35090;Note=internal stop;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004536017.1;locus_tag=LDO49_RS35090;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 31881 32516 . - . ID=gene-LDO49_RS35095;Name=LDO49_RS35095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35095;old_locus_tag=BCEP4_800046 NZ_CAJZAV010000291.1 GeneMarkS-2+ CDS 31881 32516 . - 0 ID=cds-WP_224052824.1;Parent=gene-LDO49_RS35095;Dbxref=GenBank:WP_224052824.1;Name=WP_224052824.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS35095;product=hypothetical protein;protein_id=WP_224052824.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 32575 32721 . - . ID=gene-LDO49_RS35100;Name=LDO49_RS35100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35100;old_locus_tag=BCEP4_800047 NZ_CAJZAV010000291.1 GeneMarkS-2+ CDS 32575 32721 . - 0 ID=cds-WP_224052825.1;Parent=gene-LDO49_RS35100;Dbxref=GenBank:WP_224052825.1;Name=WP_224052825.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS35100;product=hypothetical protein;protein_id=WP_224052825.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 33041 33235 . - . ID=gene-LDO49_RS35105;Name=LDO49_RS35105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35105;old_locus_tag=BCEP4_800049 NZ_CAJZAV010000291.1 GeneMarkS-2+ CDS 33041 33235 . - 0 ID=cds-WP_224052826.1;Parent=gene-LDO49_RS35105;Dbxref=GenBank:WP_224052826.1;Name=WP_224052826.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS35105;product=hypothetical protein;protein_id=WP_224052826.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 33656 35116 . - . ID=gene-LDO49_RS35110;Name=LDO49_RS35110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35110;old_locus_tag=BCEP4_800051 NZ_CAJZAV010000291.1 Protein Homology CDS 33656 35116 . - 0 ID=cds-WP_224052827.1;Parent=gene-LDO49_RS35110;Dbxref=GenBank:WP_224052827.1;Name=WP_224052827.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047389.1;locus_tag=LDO49_RS35110;product=P-loop ATPase%2C Sll1717 family;protein_id=WP_224052827.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 35113 36393 . - . ID=gene-LDO49_RS35115;Name=LDO49_RS35115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35115;old_locus_tag=BCEP4_800052 NZ_CAJZAV010000291.1 Protein Homology CDS 35113 36393 . - 0 ID=cds-WP_224052828.1;Parent=gene-LDO49_RS35115;Dbxref=GenBank:WP_224052828.1;Name=WP_224052828.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047398.1;locus_tag=LDO49_RS35115;product=KGGVGR-motif variant AAA ATPase;protein_id=WP_224052828.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 36393 37037 . - . ID=gene-LDO49_RS35120;Name=LDO49_RS35120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35120;old_locus_tag=BCEP4_800053 NZ_CAJZAV010000291.1 GeneMarkS-2+ CDS 36393 37037 . - 0 ID=cds-WP_224052829.1;Parent=gene-LDO49_RS35120;Dbxref=GenBank:WP_224052829.1;Name=WP_224052829.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS35120;product=hypothetical protein;protein_id=WP_224052829.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 37202 38329 . - . ID=gene-LDO49_RS35125;Name=LDO49_RS35125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35125;old_locus_tag=BCEP4_800054 NZ_CAJZAV010000291.1 Protein Homology CDS 37202 38329 . - 0 ID=cds-WP_224052830.1;Parent=gene-LDO49_RS35125;Dbxref=GenBank:WP_224052830.1;Name=WP_224052830.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012399664.1;locus_tag=LDO49_RS35125;product=site-specific integrase;protein_id=WP_224052830.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 38591 38902 . - . ID=gene-LDO49_RS35130;Name=LDO49_RS35130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35130;old_locus_tag=BCEP4_800055 NZ_CAJZAV010000291.1 Protein Homology CDS 38591 38902 . - 0 ID=cds-WP_060074585.1;Parent=gene-LDO49_RS35130;Dbxref=GenBank:WP_060074585.1;Name=WP_060074585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327726.1;locus_tag=LDO49_RS35130;product=hypothetical protein;protein_id=WP_060074585.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 39027 40436 . - . ID=gene-LDO49_RS35135;Name=LDO49_RS35135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35135;old_locus_tag=BCEP4_800056 NZ_CAJZAV010000291.1 Protein Homology CDS 39027 40436 . - 0 ID=cds-WP_224052831.1;Parent=gene-LDO49_RS35135;Dbxref=GenBank:WP_224052831.1;Name=WP_224052831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362855.1;locus_tag=LDO49_RS35135;product=enolase C-terminal domain-like protein;protein_id=WP_224052831.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 40499 41839 . - . ID=gene-LDO49_RS35140;Name=LDO49_RS35140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35140;old_locus_tag=BCEP4_800057 NZ_CAJZAV010000291.1 Protein Homology CDS 40499 41839 . - 0 ID=cds-WP_060074587.1;Parent=gene-LDO49_RS35140;Dbxref=GenBank:WP_060074587.1;Name=WP_060074587.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401343.1;locus_tag=LDO49_RS35140;product=MFS transporter;protein_id=WP_060074587.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 42076 43050 . - . ID=gene-LDO49_RS35145;Name=LDO49_RS35145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35145;old_locus_tag=BCEP4_800058 NZ_CAJZAV010000291.1 Protein Homology CDS 42076 43050 . - 0 ID=cds-WP_060074588.1;Parent=gene-LDO49_RS35145;Dbxref=GenBank:WP_060074588.1;Name=WP_060074588.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497440.1;locus_tag=LDO49_RS35145;product=LysR family transcriptional regulator;protein_id=WP_060074588.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 43089 43820 . + . ID=gene-LDO49_RS35150;Name=LDO49_RS35150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35150;old_locus_tag=BCEP4_800059 NZ_CAJZAV010000291.1 Protein Homology CDS 43089 43820 . + 0 ID=cds-WP_059493960.1;Parent=gene-LDO49_RS35150;Dbxref=GenBank:WP_059493960.1;Name=WP_059493960.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477389.1;locus_tag=LDO49_RS35150;product=glutathione S-transferase family protein;protein_id=WP_059493960.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 43944 44570 . + . ID=gene-LDO49_RS35155;Name=LDO49_RS35155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35155;old_locus_tag=BCEP4_800061 NZ_CAJZAV010000291.1 Protein Homology CDS 43944 44570 . + 0 ID=cds-WP_060074589.1;Parent=gene-LDO49_RS35155;Dbxref=GenBank:WP_060074589.1;Name=WP_060074589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401341.1;locus_tag=LDO49_RS35155;product=DUF2239 family protein;protein_id=WP_060074589.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 44588 45919 . + . ID=gene-LDO49_RS35160;Name=LDO49_RS35160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35160;old_locus_tag=BCEP4_800060 NZ_CAJZAV010000291.1 Protein Homology CDS 44588 45919 . + 0 ID=cds-WP_060074590.1;Parent=gene-LDO49_RS35160;Dbxref=GenBank:WP_060074590.1;Name=WP_060074590.1;Ontology_term=GO:0006720,GO:0016702,GO:0046872;gbkey=CDS;go_function=oxidoreductase activity%2C acting on single donors with incorporation of molecular oxygen%2C incorporation of two atoms of oxygen|0016702||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid metabolic process|0006720||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497437.1;locus_tag=LDO49_RS35160;product=carotenoid oxygenase family protein;protein_id=WP_060074590.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 45939 47105 . - . ID=gene-LDO49_RS35165;Name=LDO49_RS35165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35165;old_locus_tag=BCEP4_800062 NZ_CAJZAV010000291.1 Protein Homology CDS 45939 47105 . - 0 ID=cds-WP_021158597.1;Parent=gene-LDO49_RS35165;Dbxref=GenBank:WP_021158597.1;Name=WP_021158597.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497436.1;locus_tag=LDO49_RS35165;product=ABC transporter permease;protein_id=WP_021158597.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 47114 48268 . - . ID=gene-LDO49_RS35170;Name=LDO49_RS35170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35170;old_locus_tag=BCEP4_800063 NZ_CAJZAV010000291.1 Protein Homology CDS 47114 48268 . - 0 ID=cds-WP_027788610.1;Parent=gene-LDO49_RS35170;Dbxref=GenBank:WP_027788610.1;Name=WP_027788610.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546674.1;locus_tag=LDO49_RS35170;product=ABC transporter permease;protein_id=WP_027788610.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 48290 48988 . - . ID=gene-LDO49_RS35175;Name=LDO49_RS35175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35175;old_locus_tag=BCEP4_800064 NZ_CAJZAV010000291.1 Protein Homology CDS 48290 48988 . - 0 ID=cds-WP_027788609.1;Parent=gene-LDO49_RS35175;Dbxref=GenBank:WP_027788609.1;Name=WP_027788609.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477393.1;locus_tag=LDO49_RS35175;product=ABC transporter ATP-binding protein;protein_id=WP_027788609.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 48996 50201 . - . ID=gene-LDO49_RS35180;Name=LDO49_RS35180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35180;old_locus_tag=BCEP4_800065 NZ_CAJZAV010000291.1 Protein Homology CDS 48996 50201 . - 0 ID=cds-WP_048025336.1;Parent=gene-LDO49_RS35180;Dbxref=GenBank:WP_048025336.1;Name=WP_048025336.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484502.1;locus_tag=LDO49_RS35180;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_048025336.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 50573 50806 . + . ID=gene-LDO49_RS35185;Name=LDO49_RS35185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35185;old_locus_tag=BCEP4_800066 NZ_CAJZAV010000291.1 Protein Homology CDS 50573 50806 . + 0 ID=cds-WP_021158594.1;Parent=gene-LDO49_RS35185;Dbxref=GenBank:WP_021158594.1;Name=WP_021158594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327737.1;locus_tag=LDO49_RS35185;product=hypothetical protein;protein_id=WP_021158594.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 50887 51657 . - . ID=gene-LDO49_RS35190;Name=LDO49_RS35190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35190;old_locus_tag=BCEP4_800067 NZ_CAJZAV010000291.1 Protein Homology CDS 50887 51657 . - 0 ID=cds-WP_060074591.1;Parent=gene-LDO49_RS35190;Dbxref=GenBank:WP_060074591.1;Name=WP_060074591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497433.1;locus_tag=LDO49_RS35190;product=Mut7-C RNAse domain-containing protein;protein_id=WP_060074591.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 51679 52623 . + . ID=gene-LDO49_RS35195;Name=LDO49_RS35195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35195;old_locus_tag=BCEP4_800068 NZ_CAJZAV010000291.1 Protein Homology CDS 51679 52623 . + 0 ID=cds-WP_224052833.1;Parent=gene-LDO49_RS35195;Dbxref=GenBank:WP_224052833.1;Name=WP_224052833.1;Ontology_term=GO:0016491,GO:0050661,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023775.1;locus_tag=LDO49_RS35195;product=NAD(P)-dependent oxidoreductase;protein_id=WP_224052833.1;transl_table=11 NZ_CAJZAV010000291.1 RefSeq gene 52698 53339 . + . ID=gene-LDO49_RS35200;Name=LDO49_RS35200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35200;old_locus_tag=BCEP4_800070 NZ_CAJZAV010000291.1 Protein Homology CDS 52698 53339 . + 0 ID=cds-WP_021158591.1;Parent=gene-LDO49_RS35200;Dbxref=GenBank:WP_021158591.1;Name=WP_021158591.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757898.1;locus_tag=LDO49_RS35200;product=LysE family translocator;protein_id=WP_021158591.1;transl_table=11 ##sequence-region NZ_CAJZAV010000292.1 1 45796 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000292.1 RefSeq region 1 45796 . + . ID=NZ_CAJZAV010000292.1:1..45796;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_81 NZ_CAJZAV010000292.1 RefSeq gene 1 1474 . + . ID=gene-LDO49_RS35205;Name=urtB;gbkey=Gene;gene=urtB;gene_biotype=protein_coding;locus_tag=LDO49_RS35205;old_locus_tag=BCEP4_810001;partial=true;start_range=.,1 NZ_CAJZAV010000292.1 Protein Homology CDS 1 1474 . + 1 ID=cds-WP_224052834.1;Parent=gene-LDO49_RS35205;Dbxref=GenBank:WP_224052834.1;Name=WP_224052834.1;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488541.1;locus_tag=LDO49_RS35205;partial=true;product=urea ABC transporter permease subunit UrtB;protein_id=WP_224052834.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 1476 2663 . + . ID=gene-LDO49_RS35210;Name=urtC;gbkey=Gene;gene=urtC;gene_biotype=protein_coding;locus_tag=LDO49_RS35210;old_locus_tag=BCEP4_810002 NZ_CAJZAV010000292.1 Protein Homology CDS 1476 2663 . + 0 ID=cds-WP_021161913.1;Parent=gene-LDO49_RS35210;Dbxref=GenBank:WP_021161913.1;Name=WP_021161913.1;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328050.1;locus_tag=LDO49_RS35210;product=urea ABC transporter permease subunit UrtC;protein_id=WP_021161913.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 2660 3517 . + . ID=gene-LDO49_RS35215;Name=urtD;gbkey=Gene;gene=urtD;gene_biotype=protein_coding;locus_tag=LDO49_RS35215;old_locus_tag=BCEP4_810003 NZ_CAJZAV010000292.1 Protein Homology CDS 2660 3517 . + 0 ID=cds-WP_060073752.1;Parent=gene-LDO49_RS35215;Dbxref=GenBank:WP_060073752.1;Name=WP_060073752.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtD;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406305.1;locus_tag=LDO49_RS35215;product=urea ABC transporter ATP-binding protein UrtD;protein_id=WP_060073752.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 3522 4214 . + . ID=gene-LDO49_RS35220;Name=urtE;gbkey=Gene;gene=urtE;gene_biotype=protein_coding;locus_tag=LDO49_RS35220;old_locus_tag=BCEP4_810004 NZ_CAJZAV010000292.1 Protein Homology CDS 3522 4214 . + 0 ID=cds-WP_059811591.1;Parent=gene-LDO49_RS35220;Dbxref=GenBank:WP_059811591.1;Name=WP_059811591.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtE;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332923.1;locus_tag=LDO49_RS35220;product=urea ABC transporter ATP-binding subunit UrtE;protein_id=WP_059811591.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 4396 5271 . + . ID=gene-LDO49_RS35225;Name=LDO49_RS35225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35225;old_locus_tag=BCEP4_810005 NZ_CAJZAV010000292.1 Protein Homology CDS 4396 5271 . + 0 ID=cds-WP_060073795.1;Parent=gene-LDO49_RS35225;Dbxref=GenBank:WP_060073795.1;Name=WP_060073795.1;Ontology_term=GO:0008152,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758742.1;locus_tag=LDO49_RS35225;product=urease accessory protein UreD;protein_id=WP_060073795.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 5508 5810 . + . ID=gene-LDO49_RS35230;Name=LDO49_RS35230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35230;old_locus_tag=BCEP4_810006 NZ_CAJZAV010000292.1 Protein Homology CDS 5508 5810 . + 0 ID=cds-WP_006491064.1;Parent=gene-LDO49_RS35230;Dbxref=GenBank:WP_006491064.1;Name=WP_006491064.1;Ontology_term=GO:0043419,GO:0009039,GO:0016151;gbkey=CDS;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008923043.1;locus_tag=LDO49_RS35230;product=urease subunit gamma;protein_id=WP_006491064.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 5819 6124 . + . ID=gene-LDO49_RS35235;Name=LDO49_RS35235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35235;old_locus_tag=BCEP4_810007 NZ_CAJZAV010000292.1 Protein Homology CDS 5819 6124 . + 0 ID=cds-WP_021161917.1;Parent=gene-LDO49_RS35235;Dbxref=GenBank:WP_021161917.1;Name=WP_021161917.1;Ontology_term=GO:0043419,GO:0035550;gbkey=CDS;go_component=urease complex|0035550||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332918.1;locus_tag=LDO49_RS35235;product=urease subunit beta;protein_id=WP_021161917.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 6153 7859 . + . ID=gene-LDO49_RS35240;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=LDO49_RS35240;old_locus_tag=BCEP4_810008 NZ_CAJZAV010000292.1 Protein Homology CDS 6153 7859 . + 0 ID=cds-WP_060073754.1;Parent=gene-LDO49_RS35240;Dbxref=GenBank:WP_060073754.1;Name=WP_060073754.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758739.1;locus_tag=LDO49_RS35240;product=urease subunit alpha;protein_id=WP_060073754.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 7877 8494 . + . ID=gene-LDO49_RS35245;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=LDO49_RS35245;old_locus_tag=BCEP4_810009 NZ_CAJZAV010000292.1 Protein Homology CDS 7877 8494 . + 0 ID=cds-WP_200059662.1;Parent=gene-LDO49_RS35245;Dbxref=GenBank:WP_200059662.1;Name=WP_200059662.1;Ontology_term=GO:0019627,GO:0016151;gbkey=CDS;gene=ureE;go_function=nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752111.1;locus_tag=LDO49_RS35245;product=urease accessory protein UreE;protein_id=WP_200059662.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 8481 9161 . + . ID=gene-LDO49_RS35250;Name=LDO49_RS35250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35250;old_locus_tag=BCEP4_810010 NZ_CAJZAV010000292.1 Protein Homology CDS 8481 9161 . + 0 ID=cds-WP_042976674.1;Parent=gene-LDO49_RS35250;Dbxref=GenBank:WP_042976674.1;Name=WP_042976674.1;Ontology_term=GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601275.1;locus_tag=LDO49_RS35250;product=urease accessory protein UreF;protein_id=WP_042976674.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 9176 9823 . + . ID=gene-LDO49_RS35255;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=LDO49_RS35255;old_locus_tag=BCEP4_810011 NZ_CAJZAV010000292.1 Protein Homology CDS 9176 9823 . + 0 ID=cds-WP_027788168.1;Parent=gene-LDO49_RS35255;Dbxref=GenBank:WP_027788168.1;Name=WP_027788168.1;Ontology_term=GO:0019627,GO:0003924,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=GTPase activity|0003924||IEA,metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656154.1;locus_tag=LDO49_RS35255;product=urease accessory protein UreG;protein_id=WP_027788168.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 9892 11250 . - . ID=gene-LDO49_RS35260;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=LDO49_RS35260;old_locus_tag=BCEP4_810012 NZ_CAJZAV010000292.1 Protein Homology CDS 9892 11250 . - 0 ID=cds-WP_048024238.1;Parent=gene-LDO49_RS35260;Dbxref=GenBank:WP_048024238.1;Name=WP_048024238.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351181.1;locus_tag=LDO49_RS35260;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_048024238.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 11288 12172 . - . ID=gene-LDO49_RS35265;Name=LDO49_RS35265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35265;old_locus_tag=BCEP4_810013 NZ_CAJZAV010000292.1 Protein Homology CDS 11288 12172 . - 0 ID=cds-WP_021161704.1;Parent=gene-LDO49_RS35265;Dbxref=GenBank:WP_021161704.1;Name=WP_021161704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332912.1;locus_tag=LDO49_RS35265;product=Kdo hydroxylase family protein;protein_id=WP_021161704.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 12248 13243 . - . ID=gene-LDO49_RS35270;Name=waaC;gbkey=Gene;gene=waaC;gene_biotype=protein_coding;locus_tag=LDO49_RS35270;old_locus_tag=BCEP4_810014 NZ_CAJZAV010000292.1 Protein Homology CDS 12248 13243 . - 0 ID=cds-WP_060073757.1;Parent=gene-LDO49_RS35270;Dbxref=GenBank:WP_060073757.1;Name=WP_060073757.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=waaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363245.1;locus_tag=LDO49_RS35270;product=lipopolysaccharide heptosyltransferase I;protein_id=WP_060073757.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 13419 14813 . - . ID=gene-LDO49_RS35275;Name=LDO49_RS35275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35275;old_locus_tag=BCEP4_810015 NZ_CAJZAV010000292.1 Protein Homology CDS 13419 14813 . - 0 ID=cds-WP_021161706.1;Parent=gene-LDO49_RS35275;Dbxref=GenBank:WP_021161706.1;Name=WP_021161706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897868.1;locus_tag=LDO49_RS35275;product=phosphomannomutase/phosphoglucomutase;protein_id=WP_021161706.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 15077 16333 . + . ID=gene-LDO49_RS35280;Name=LDO49_RS35280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35280;old_locus_tag=BCEP4_810017 NZ_CAJZAV010000292.1 Protein Homology CDS 15077 16333 . + 0 ID=cds-WP_060073759.1;Parent=gene-LDO49_RS35280;Dbxref=GenBank:WP_060073759.1;Name=WP_060073759.1;Ontology_term=GO:0140327,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751076.1;locus_tag=LDO49_RS35280;product=lipopolysaccharide biosynthesis protein;protein_id=WP_060073759.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 16330 17154 . + . ID=gene-LDO49_RS35285;Name=LDO49_RS35285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35285;old_locus_tag=BCEP4_810018 NZ_CAJZAV010000292.1 Protein Homology CDS 16330 17154 . + 0 ID=cds-WP_060073761.1;Parent=gene-LDO49_RS35285;Dbxref=GenBank:WP_060073761.1;Name=WP_060073761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412230.1;locus_tag=LDO49_RS35285;product=glycosyltransferase;protein_id=WP_060073761.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 17206 18342 . + . ID=gene-LDO49_RS35290;Name=LDO49_RS35290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35290;old_locus_tag=BCEP4_810019 NZ_CAJZAV010000292.1 Protein Homology CDS 17206 18342 . + 0 ID=cds-WP_060073764.1;Parent=gene-LDO49_RS35290;Dbxref=GenBank:WP_060073764.1;Name=WP_060073764.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485113.1;locus_tag=LDO49_RS35290;product=glycosyltransferase family 4 protein;protein_id=WP_060073764.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 18358 19380 . + . ID=gene-LDO49_RS35295;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=LDO49_RS35295;old_locus_tag=BCEP4_810020 NZ_CAJZAV010000292.1 Protein Homology CDS 18358 19380 . + 0 ID=cds-WP_060073766.1;Parent=gene-LDO49_RS35295;Dbxref=GenBank:WP_060073766.1;Name=WP_060073766.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527590.1;locus_tag=LDO49_RS35295;product=UDP-glucose 4-epimerase GalE;protein_id=WP_060073766.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 19408 20514 . + . ID=gene-LDO49_RS35300;Name=LDO49_RS35300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35300;old_locus_tag=BCEP4_810021 NZ_CAJZAV010000292.1 Protein Homology CDS 19408 20514 . + 0 ID=cds-WP_048024245.1;Parent=gene-LDO49_RS35300;Dbxref=GenBank:WP_048024245.1;Name=WP_048024245.1;Ontology_term=GO:0009252,GO:0016780,GO:0046872;gbkey=CDS;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363239.1;locus_tag=LDO49_RS35300;product=MraY family glycosyltransferase;protein_id=WP_048024245.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 20610 22484 . - . ID=gene-LDO49_RS35305;Name=LDO49_RS35305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35305;old_locus_tag=BCEP4_810022 NZ_CAJZAV010000292.1 Protein Homology CDS 20610 22484 . - 0 ID=cds-WP_048024247.1;Parent=gene-LDO49_RS35305;Dbxref=GenBank:WP_048024247.1;Name=WP_048024247.1;Ontology_term=GO:0000271;gbkey=CDS;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363237.1;locus_tag=LDO49_RS35305;product=polysaccharide biosynthesis protein;protein_id=WP_048024247.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 22497 23513 . - . ID=gene-LDO49_RS35310;Name=LDO49_RS35310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35310;old_locus_tag=BCEP4_810023 NZ_CAJZAV010000292.1 Protein Homology CDS 22497 23513 . - 0 ID=cds-WP_124475163.1;Parent=gene-LDO49_RS35310;Dbxref=GenBank:WP_124475163.1;Name=WP_124475163.1;Ontology_term=GO:0009252,GO:0016780,GO:0046872;gbkey=CDS;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543991.1;locus_tag=LDO49_RS35310;product=MraY family glycosyltransferase;protein_id=WP_124475163.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 23519 24484 . - . ID=gene-LDO49_RS35315;Name=LDO49_RS35315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35315;old_locus_tag=BCEP4_810024 NZ_CAJZAV010000292.1 Protein Homology CDS 23519 24484 . - 0 ID=cds-WP_048024250.1;Parent=gene-LDO49_RS35315;Dbxref=GenBank:WP_048024250.1;Name=WP_048024250.1;Ontology_term=GO:0016854;gbkey=CDS;go_function=racemase and epimerase activity|0016854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544758.1;locus_tag=LDO49_RS35315;product=UDP-glucose 4-epimerase family protein;protein_id=WP_048024250.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 24481 25341 . - . ID=gene-LDO49_RS35320;Name=LDO49_RS35320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35320;old_locus_tag=BCEP4_810025 NZ_CAJZAV010000292.1 Protein Homology CDS 24481 25341 . - 0 ID=cds-WP_059619109.1;Parent=gene-LDO49_RS35320;Dbxref=GenBank:WP_059619109.1;Name=WP_059619109.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759732.1;locus_tag=LDO49_RS35320;product=glycosyltransferase family 2 protein;protein_id=WP_059619109.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 25598 27961 . + . ID=gene-LDO49_RS35325;Name=LDO49_RS35325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35325;old_locus_tag=BCEP4_810026 NZ_CAJZAV010000292.1 Protein Homology CDS 25598 27961 . + 0 ID=cds-WP_165589128.1;Parent=gene-LDO49_RS35325;Dbxref=GenBank:WP_165589128.1;Name=WP_165589128.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: protein motif:HMM:NF012745.7;locus_tag=LDO49_RS35325;product=glycosyltransferase;protein_id=WP_165589128.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 28034 30004 . - . ID=gene-LDO49_RS35330;Name=LDO49_RS35330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35330;old_locus_tag=BCEP4_810027 NZ_CAJZAV010000292.1 Protein Homology CDS 28034 30004 . - 0 ID=cds-WP_060073769.1;Parent=gene-LDO49_RS35330;Dbxref=GenBank:WP_060073769.1;Name=WP_060073769.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493012.1;locus_tag=LDO49_RS35330;product=glycosyltransferase family 2 protein;protein_id=WP_060073769.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 29994 31358 . - . ID=gene-LDO49_RS35335;Name=LDO49_RS35335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35335;old_locus_tag=BCEP4_810028 NZ_CAJZAV010000292.1 Protein Homology CDS 29994 31358 . - 0 ID=cds-WP_060073772.1;Parent=gene-LDO49_RS35335;Dbxref=GenBank:WP_060073772.1;Name=WP_060073772.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493017.1;locus_tag=LDO49_RS35335;product=glycosyltransferase family 4 protein;protein_id=WP_060073772.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 31390 32694 . - . ID=gene-LDO49_RS35340;Name=LDO49_RS35340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35340;old_locus_tag=BCEP4_810029 NZ_CAJZAV010000292.1 Protein Homology CDS 31390 32694 . - 0 ID=cds-WP_060073774.1;Parent=gene-LDO49_RS35340;Dbxref=GenBank:WP_060073774.1;Name=WP_060073774.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF025025.6;locus_tag=LDO49_RS35340;product=glycosyltransferase family 2 protein;protein_id=WP_060073774.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 32681 33826 . - . ID=gene-LDO49_RS35345;Name=LDO49_RS35345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35345;old_locus_tag=BCEP4_810030 NZ_CAJZAV010000292.1 Protein Homology CDS 32681 33826 . - 0 ID=cds-WP_060073775.1;Parent=gene-LDO49_RS35345;Dbxref=GenBank:WP_060073775.1;Name=WP_060073775.1;Ontology_term=GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759738.1;locus_tag=LDO49_RS35345;product=DegT/DnrJ/EryC1/StrS family aminotransferase;protein_id=WP_060073775.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 33904 35217 . - . ID=gene-LDO49_RS35350;Name=LDO49_RS35350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35350;old_locus_tag=BCEP4_810031 NZ_CAJZAV010000292.1 Protein Homology CDS 33904 35217 . - 0 ID=cds-WP_021161722.1;Parent=gene-LDO49_RS35350;Dbxref=GenBank:WP_021161722.1;Name=WP_021161722.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759739.1;locus_tag=LDO49_RS35350;product=ABC transporter ATP-binding protein;protein_id=WP_021161722.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 35207 36013 . - . ID=gene-LDO49_RS35355;Name=LDO49_RS35355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35355;old_locus_tag=BCEP4_810032 NZ_CAJZAV010000292.1 Protein Homology CDS 35207 36013 . - 0 ID=cds-WP_042976531.1;Parent=gene-LDO49_RS35355;Dbxref=GenBank:WP_042976531.1;Name=WP_042976531.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759740.1;locus_tag=LDO49_RS35355;product=ABC transporter permease;protein_id=WP_042976531.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 36090 36986 . - . ID=gene-LDO49_RS35360;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=LDO49_RS35360;old_locus_tag=BCEP4_810033 NZ_CAJZAV010000292.1 Protein Homology CDS 36090 36986 . - 0 ID=cds-WP_060073777.1;Parent=gene-LDO49_RS35360;Dbxref=GenBank:WP_060073777.1;Name=WP_060073777.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012428087.1;locus_tag=LDO49_RS35360;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_060073777.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 36983 37531 . - . ID=gene-LDO49_RS35365;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=LDO49_RS35365;old_locus_tag=BCEP4_810034 NZ_CAJZAV010000292.1 Protein Homology CDS 36983 37531 . - 0 ID=cds-WP_021161725.1;Parent=gene-LDO49_RS35365;Dbxref=GenBank:WP_021161725.1;Name=WP_021161725.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185665.1;locus_tag=LDO49_RS35365;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_021161725.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 37516 38409 . - . ID=gene-LDO49_RS35370;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=LDO49_RS35370;old_locus_tag=BCEP4_810035 NZ_CAJZAV010000292.1 Protein Homology CDS 37516 38409 . - 0 ID=cds-WP_048024263.1;Parent=gene-LDO49_RS35370;Dbxref=GenBank:WP_048024263.1;Name=WP_048024263.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328029.1;locus_tag=LDO49_RS35370;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_048024263.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 38421 39482 . - . ID=gene-LDO49_RS35375;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=LDO49_RS35375;old_locus_tag=BCEP4_810036 NZ_CAJZAV010000292.1 Protein Homology CDS 38421 39482 . - 0 ID=cds-WP_021161727.1;Parent=gene-LDO49_RS35375;Dbxref=GenBank:WP_021161727.1;Name=WP_021161727.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485109.1;locus_tag=LDO49_RS35375;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_021161727.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 39825 40664 . + . ID=gene-LDO49_RS35380;Name=LDO49_RS35380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35380;old_locus_tag=BCEP4_810037 NZ_CAJZAV010000292.1 Protein Homology CDS 39825 40664 . + 0 ID=cds-WP_060073779.1;Parent=gene-LDO49_RS35380;Dbxref=GenBank:WP_060073779.1;Name=WP_060073779.1;Ontology_term=GO:0008803;gbkey=CDS;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765015.1;locus_tag=LDO49_RS35380;product=symmetrical bis(5'-nucleosyl)-tetraphosphatase;protein_id=WP_060073779.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 40710 41567 . - . ID=gene-LDO49_RS35385;Name=LDO49_RS35385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35385;old_locus_tag=BCEP4_810038 NZ_CAJZAV010000292.1 Protein Homology CDS 40710 41567 . - 0 ID=cds-WP_060073782.1;Parent=gene-LDO49_RS35385;Dbxref=GenBank:WP_060073782.1;Name=WP_060073782.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186297.1;locus_tag=LDO49_RS35385;product=lysophospholipid acyltransferase family protein;protein_id=WP_060073782.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 41587 42876 . - . ID=gene-LDO49_RS35390;Name=LDO49_RS35390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35390;old_locus_tag=BCEP4_810039 NZ_CAJZAV010000292.1 Protein Homology CDS 41587 42876 . - 0 ID=cds-WP_059590372.1;Parent=gene-LDO49_RS35390;Dbxref=GenBank:WP_059590372.1;Name=WP_059590372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696826.1;locus_tag=LDO49_RS35390;product=dihydroorotase;protein_id=WP_059590372.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 42938 43969 . - . ID=gene-LDO49_RS35395;Name=LDO49_RS35395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35395;old_locus_tag=BCEP4_810040 NZ_CAJZAV010000292.1 Protein Homology CDS 42938 43969 . - 0 ID=cds-WP_006476735.1;Parent=gene-LDO49_RS35395;Dbxref=GenBank:WP_006476735.1;Name=WP_006476735.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600263.1;locus_tag=LDO49_RS35395;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_006476735.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 44043 44555 . - . ID=gene-LDO49_RS35400;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=LDO49_RS35400;old_locus_tag=BCEP4_810041 NZ_CAJZAV010000292.1 Protein Homology CDS 44043 44555 . - 0 ID=cds-WP_048024273.1;Parent=gene-LDO49_RS35400;Dbxref=GenBank:WP_048024273.1;Name=WP_048024273.1;Ontology_term=GO:0009116;gbkey=CDS;gene=pyrR;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476736.1;locus_tag=LDO49_RS35400;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_048024273.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 44542 44991 . - . ID=gene-LDO49_RS35405;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=LDO49_RS35405;old_locus_tag=BCEP4_810042 NZ_CAJZAV010000292.1 Protein Homology CDS 44542 44991 . - 0 ID=cds-WP_059498355.1;Parent=gene-LDO49_RS35405;Dbxref=GenBank:WP_059498355.1;Name=WP_059498355.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762411.1;locus_tag=LDO49_RS35405;product=Holliday junction resolvase RuvX;protein_id=WP_059498355.1;transl_table=11 NZ_CAJZAV010000292.1 RefSeq gene 44988 45566 . - . ID=gene-LDO49_RS35410;Name=LDO49_RS35410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35410;old_locus_tag=BCEP4_810043 NZ_CAJZAV010000292.1 Protein Homology CDS 44988 45566 . - 0 ID=cds-WP_027788202.1;Parent=gene-LDO49_RS35410;Dbxref=GenBank:WP_027788202.1;Name=WP_027788202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185441.1;locus_tag=LDO49_RS35410;product=YqgE/AlgH family protein;protein_id=WP_027788202.1;transl_table=11 ##sequence-region NZ_CAJZAV010000293.1 1 15845 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000293.1 RefSeq region 1 15845 . + . ID=NZ_CAJZAV010000293.1:1..15845;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_82 NZ_CAJZAV010000293.1 RefSeq gene 1 839 . + . ID=gene-LDO49_RS35415;Name=LDO49_RS35415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35415;old_locus_tag=BCEP4_820001;partial=true;start_range=.,1 NZ_CAJZAV010000293.1 Protein Homology CDS 1 839 . + 2 ID=cds-WP_224052835.1;Parent=gene-LDO49_RS35415;Dbxref=GenBank:WP_224052835.1;Name=WP_224052835.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481292.1;locus_tag=LDO49_RS35415;partial=true;product=aminotransferase-like domain-containing protein;protein_id=WP_224052835.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000293.1 RefSeq gene 874 2034 . - . ID=gene-LDO49_RS35420;Name=LDO49_RS35420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35420;old_locus_tag=BCEP4_820002 NZ_CAJZAV010000293.1 Protein Homology CDS 874 2034 . - 0 ID=cds-WP_224052836.1;Parent=gene-LDO49_RS35420;Dbxref=GenBank:WP_224052836.1;Name=WP_224052836.1;Ontology_term=GO:0008863,GO:0051287;gbkey=CDS;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336575.1;locus_tag=LDO49_RS35420;product=NAD-dependent formate dehydrogenase;protein_id=WP_224052836.1;transl_table=11 NZ_CAJZAV010000293.1 RefSeq gene 2270 3802 . + . ID=gene-LDO49_RS35425;Name=LDO49_RS35425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35425;old_locus_tag=BCEP4_820004 NZ_CAJZAV010000293.1 Protein Homology CDS 2270 3802 . + 0 ID=cds-WP_224052837.1;Parent=gene-LDO49_RS35425;Dbxref=GenBank:WP_224052837.1;Name=WP_224052837.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481290.1;locus_tag=LDO49_RS35425;product=FAD-dependent oxidoreductase;protein_id=WP_224052837.1;transl_table=11 NZ_CAJZAV010000293.1 RefSeq gene 3840 4217 . + . ID=gene-LDO49_RS35430;Name=LDO49_RS35430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35430;old_locus_tag=BCEP4_820005 NZ_CAJZAV010000293.1 Protein Homology CDS 3840 4217 . + 0 ID=cds-WP_060147814.1;Parent=gene-LDO49_RS35430;Dbxref=GenBank:WP_060147814.1;Name=WP_060147814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481289.1;locus_tag=LDO49_RS35430;product=DUF5594 family protein;protein_id=WP_060147814.1;transl_table=11 NZ_CAJZAV010000293.1 RefSeq gene 4267 4485 . - . ID=gene-LDO49_RS35435;Name=LDO49_RS35435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35435;old_locus_tag=BCEP4_820006 NZ_CAJZAV010000293.1 Protein Homology CDS 4267 4485 . - 0 ID=cds-WP_034189953.1;Parent=gene-LDO49_RS35435;Dbxref=GenBank:WP_034189953.1;Name=WP_034189953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481288.1;locus_tag=LDO49_RS35435;product=DUF6566 family protein;protein_id=WP_034189953.1;transl_table=11 NZ_CAJZAV010000293.1 RefSeq gene 4620 5258 . + . ID=gene-LDO49_RS35440;Name=LDO49_RS35440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35440;old_locus_tag=BCEP4_820007 NZ_CAJZAV010000293.1 Protein Homology CDS 4620 5258 . + 0 ID=cds-WP_060147817.1;Parent=gene-LDO49_RS35440;Dbxref=GenBank:WP_060147817.1;Name=WP_060147817.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498386.1;locus_tag=LDO49_RS35440;product=MarC family protein;protein_id=WP_060147817.1;transl_table=11 NZ_CAJZAV010000293.1 RefSeq gene 5379 6584 . + . ID=gene-LDO49_RS35445;Name=LDO49_RS35445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35445;old_locus_tag=BCEP4_820008 NZ_CAJZAV010000293.1 Protein Homology CDS 5379 6584 . + 0 ID=cds-WP_060147818.1;Parent=gene-LDO49_RS35445;Dbxref=GenBank:WP_060147818.1;Name=WP_060147818.1;Ontology_term=GO:0008270,GO:0016616,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004557884.1;locus_tag=LDO49_RS35445;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_060147818.1;transl_table=11 NZ_CAJZAV010000293.1 RefSeq gene 6614 6937 . + . ID=gene-LDO49_RS35450;Name=LDO49_RS35450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35450;old_locus_tag=BCEP4_820009 NZ_CAJZAV010000293.1 Protein Homology CDS 6614 6937 . + 0 ID=cds-WP_059485944.1;Parent=gene-LDO49_RS35450;Dbxref=GenBank:WP_059485944.1;Name=WP_059485944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336581.1;locus_tag=LDO49_RS35450;product=hypothetical protein;protein_id=WP_059485944.1;transl_table=11 NZ_CAJZAV010000293.1 RefSeq gene 6948 8540 . - . ID=gene-LDO49_RS35455;Name=LDO49_RS35455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35455;old_locus_tag=BCEP4_820010 NZ_CAJZAV010000293.1 Protein Homology CDS 6948 8540 . - 0 ID=cds-WP_224052838.1;Parent=gene-LDO49_RS35455;Dbxref=GenBank:WP_224052838.1;Name=WP_224052838.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0000156,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphorelay response regulator activity|0000156||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761715.1;locus_tag=LDO49_RS35455;product=PAS domain-containing hybrid sensor histidine kinase/response regulator;protein_id=WP_224052838.1;transl_table=11 NZ_CAJZAV010000293.1 RefSeq gene 8818 9195 . + . ID=gene-LDO49_RS35460;Name=LDO49_RS35460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35460;old_locus_tag=BCEP4_820011 NZ_CAJZAV010000293.1 Protein Homology CDS 8818 9195 . + 0 ID=cds-WP_048028567.1;Parent=gene-LDO49_RS35460;Dbxref=GenBank:WP_048028567.1;Name=WP_048028567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755200.1;locus_tag=LDO49_RS35460;product=hypothetical protein;protein_id=WP_048028567.1;transl_table=11 NZ_CAJZAV010000293.1 RefSeq gene 9388 10191 . + . ID=gene-LDO49_RS35465;Name=LDO49_RS35465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35465;old_locus_tag=BCEP4_820013 NZ_CAJZAV010000293.1 Protein Homology CDS 9388 10191 . + 0 ID=cds-WP_060147822.1;Parent=gene-LDO49_RS35465;Dbxref=GenBank:WP_060147822.1;Name=WP_060147822.1;Ontology_term=GO:0005488,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545593.1;locus_tag=LDO49_RS35465;product=BON domain-containing protein;protein_id=WP_060147822.1;transl_table=11 NZ_CAJZAV010000293.1 RefSeq pseudogene 10238 10546 . + . ID=gene-LDO49_RS35470;Name=LDO49_RS35470;end_range=10546,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS35470;old_locus_tag=BCEP4_820014;partial=true;pseudo=true NZ_CAJZAV010000293.1 Protein Homology CDS 10238 10546 . + 0 ID=cds-LDO49_RS35470;Parent=gene-LDO49_RS35470;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=10546,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011695003.1;locus_tag=LDO49_RS35470;partial=true;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CAJZAV010000293.1 RefSeq gene 10628 11152 . + . ID=gene-LDO49_RS35475;Name=LDO49_RS35475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35475;old_locus_tag=BCEP4_820016 NZ_CAJZAV010000293.1 Protein Homology CDS 10628 11152 . + 0 ID=cds-WP_372585893.1;Parent=gene-LDO49_RS35475;Dbxref=GenBank:WP_372585893.1;Name=WP_372585893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755681.1;locus_tag=LDO49_RS35475;product=hypothetical protein;protein_id=WP_372585893.1;transl_table=11 NZ_CAJZAV010000293.1 RefSeq gene 11306 12085 . + . ID=gene-LDO49_RS35480;Name=LDO49_RS35480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35480;old_locus_tag=BCEP4_820017 NZ_CAJZAV010000293.1 Protein Homology CDS 11306 12085 . + 0 ID=cds-WP_261318308.1;Parent=gene-LDO49_RS35480;Dbxref=GenBank:WP_261318308.1;Name=WP_261318308.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011695004.1;locus_tag=LDO49_RS35480;product=SDR family oxidoreductase;protein_id=WP_261318308.1;transl_table=11 NZ_CAJZAV010000293.1 RefSeq gene 12076 12687 . + . ID=gene-LDO49_RS35485;Name=LDO49_RS35485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35485;old_locus_tag=BCEP4_820018 NZ_CAJZAV010000293.1 Protein Homology CDS 12076 12687 . + 0 ID=cds-WP_060147826.1;Parent=gene-LDO49_RS35485;Dbxref=GenBank:WP_060147826.1;Name=WP_060147826.1;Ontology_term=GO:0034200,GO:0046872;gbkey=CDS;go_function=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase activity|0034200||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755683.1;locus_tag=LDO49_RS35485;product=D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate 7-phosphatase;protein_id=WP_060147826.1;transl_table=11 NZ_CAJZAV010000293.1 RefSeq gene 12684 13886 . + . ID=gene-LDO49_RS35490;Name=LDO49_RS35490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35490;old_locus_tag=BCEP4_820019 NZ_CAJZAV010000293.1 Protein Homology CDS 12684 13886 . + 0 ID=cds-WP_060147917.1;Parent=gene-LDO49_RS35490;Dbxref=GenBank:WP_060147917.1;Name=WP_060147917.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336589.1;locus_tag=LDO49_RS35490;product=glycosyltransferase family 9 protein;protein_id=WP_060147917.1;transl_table=11 NZ_CAJZAV010000293.1 RefSeq gene 13890 15635 . + . ID=gene-LDO49_RS35495;Name=LDO49_RS35495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35495;old_locus_tag=BCEP4_820020 NZ_CAJZAV010000293.1 Protein Homology CDS 13890 15635 . + 0 ID=cds-WP_060147828.1;Parent=gene-LDO49_RS35495;Dbxref=GenBank:WP_060147828.1;Name=WP_060147828.1;Ontology_term=GO:0000166,GO:0016743,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545587.1;locus_tag=LDO49_RS35495;product=carbamoyltransferase family protein;protein_id=WP_060147828.1;transl_table=11 NZ_CAJZAV010000293.1 RefSeq gene 15632 15845 . + . ID=gene-LDO49_RS35500;Name=LDO49_RS35500;end_range=15845,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35500;partial=true NZ_CAJZAV010000293.1 Protein Homology CDS 15632 15845 . + 0 ID=cds-WP_224052839.1;Parent=gene-LDO49_RS35500;Dbxref=GenBank:WP_224052839.1;Name=WP_224052839.1;Ontology_term=GO:0016757;end_range=15845,.;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336591.1;locus_tag=LDO49_RS35500;partial=true;product=glycosyltransferase family 2 protein;protein_id=WP_224052839.1;transl_table=11 ##sequence-region NZ_CAJZAV010000294.1 1 32210 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000294.1 RefSeq region 1 32210 . + . ID=NZ_CAJZAV010000294.1:1..32210;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_83 NZ_CAJZAV010000294.1 RefSeq gene 1 1490 . - . ID=gene-LDO49_RS35505;Name=LDO49_RS35505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35505;partial=true;start_range=.,1 NZ_CAJZAV010000294.1 Protein Homology CDS 1 1490 . - 0 ID=cds-WP_224052840.1;Parent=gene-LDO49_RS35505;Dbxref=GenBank:WP_224052840.1;Name=WP_224052840.1;Ontology_term=GO:0006631,GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904408.1;locus_tag=LDO49_RS35505;partial=true;product=acyl-CoA dehydrogenase family protein;protein_id=WP_224052840.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 1949 2626 . - . ID=gene-LDO49_RS35510;Name=LDO49_RS35510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35510;old_locus_tag=BCEP4_830003 NZ_CAJZAV010000294.1 Protein Homology CDS 1949 2626 . - 0 ID=cds-WP_224052841.1;Parent=gene-LDO49_RS35510;Dbxref=GenBank:WP_224052841.1;Name=WP_224052841.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF012905.6;locus_tag=LDO49_RS35510;product=HAD family hydrolase;protein_id=WP_224052841.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 2930 3208 . + . ID=gene-LDO49_RS35515;Name=LDO49_RS35515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35515;old_locus_tag=BCEP4_830004 NZ_CAJZAV010000294.1 GeneMarkS-2+ CDS 2930 3208 . + 0 ID=cds-WP_224052842.1;Parent=gene-LDO49_RS35515;Dbxref=GenBank:WP_224052842.1;Name=WP_224052842.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS35515;product=hypothetical protein;protein_id=WP_224052842.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 3231 3464 . + . ID=gene-LDO49_RS35520;Name=LDO49_RS35520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35520 NZ_CAJZAV010000294.1 Protein Homology CDS 3231 3464 . + 0 ID=cds-WP_059585612.1;Parent=gene-LDO49_RS35520;Dbxref=GenBank:WP_059585612.1;Name=WP_059585612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008921299.1;locus_tag=LDO49_RS35520;product=hypothetical protein;protein_id=WP_059585612.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 3759 4406 . + . ID=gene-LDO49_RS35525;Name=LDO49_RS35525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35525;old_locus_tag=BCEP4_830007 NZ_CAJZAV010000294.1 GeneMarkS-2+ CDS 3759 4406 . + 0 ID=cds-WP_192387877.1;Parent=gene-LDO49_RS35525;Dbxref=GenBank:WP_192387877.1;Name=WP_192387877.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS35525;product=Imm50 family immunity protein;protein_id=WP_192387877.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 5251 5835 . + . ID=gene-LDO49_RS35530;Name=LDO49_RS35530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35530;old_locus_tag=BCEP4_830010 NZ_CAJZAV010000294.1 GeneMarkS-2+ CDS 5251 5835 . + 0 ID=cds-WP_059554361.1;Parent=gene-LDO49_RS35530;Dbxref=GenBank:WP_059554361.1;Name=WP_059554361.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS35530;product=hypothetical protein;protein_id=WP_059554361.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 5926 8043 . + . ID=gene-LDO49_RS35535;Name=LDO49_RS35535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35535;old_locus_tag=BCEP4_830011 NZ_CAJZAV010000294.1 Protein Homology CDS 5926 8043 . + 0 ID=cds-WP_185730877.1;Parent=gene-LDO49_RS35535;Dbxref=GenBank:WP_185730877.1;Name=WP_185730877.1;Ontology_term=GO:0006508,GO:0004252,GO:0008233,GO:0008236;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA,peptidase activity|0008233||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF012318.6;locus_tag=LDO49_RS35535;product=trypsin-like serine peptidase;protein_id=WP_185730877.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 8073 8966 . + . ID=gene-LDO49_RS35540;Name=LDO49_RS35540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35540;old_locus_tag=BCEP4_830012 NZ_CAJZAV010000294.1 GeneMarkS-2+ CDS 8073 8966 . + 0 ID=cds-WP_224052843.1;Parent=gene-LDO49_RS35540;Dbxref=GenBank:WP_224052843.1;Name=WP_224052843.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS35540;product=hypothetical protein;protein_id=WP_224052843.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 9550 10482 . + . ID=gene-LDO49_RS35545;Name=LDO49_RS35545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35545;old_locus_tag=BCEP4_830013 NZ_CAJZAV010000294.1 Protein Homology CDS 9550 10482 . + 0 ID=cds-WP_060148380.1;Parent=gene-LDO49_RS35545;Dbxref=GenBank:WP_060148380.1;Name=WP_060148380.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749778.1;locus_tag=LDO49_RS35545;product=MBL fold metallo-hydrolase;protein_id=WP_060148380.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 10672 11244 . + . ID=gene-LDO49_RS35550;Name=LDO49_RS35550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35550;old_locus_tag=BCEP4_830014 NZ_CAJZAV010000294.1 Protein Homology CDS 10672 11244 . + 0 ID=cds-WP_081079531.1;Parent=gene-LDO49_RS35550;Dbxref=GenBank:WP_081079531.1;Name=WP_081079531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020067790.1;locus_tag=LDO49_RS35550;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_081079531.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 11263 12012 . - . ID=gene-LDO49_RS35555;Name=LDO49_RS35555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35555;old_locus_tag=BCEP4_830015 NZ_CAJZAV010000294.1 Protein Homology CDS 11263 12012 . - 0 ID=cds-WP_060148409.1;Parent=gene-LDO49_RS35555;Dbxref=GenBank:WP_060148409.1;Name=WP_060148409.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009771500.1;locus_tag=LDO49_RS35555;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_060148409.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 12121 12999 . + . ID=gene-LDO49_RS35560;Name=LDO49_RS35560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35560;old_locus_tag=BCEP4_830016 NZ_CAJZAV010000294.1 Protein Homology CDS 12121 12999 . + 0 ID=cds-WP_059651304.1;Parent=gene-LDO49_RS35560;Dbxref=GenBank:WP_059651304.1;Name=WP_059651304.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012428491.1;locus_tag=LDO49_RS35560;product=LysR family transcriptional regulator;protein_id=WP_059651304.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 13048 13188 . - . ID=gene-LDO49_RS35565;Name=LDO49_RS35565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35565 NZ_CAJZAV010000294.1 GeneMarkS-2+ CDS 13048 13188 . - 0 ID=cds-WP_155638185.1;Parent=gene-LDO49_RS35565;Dbxref=GenBank:WP_155638185.1;Name=WP_155638185.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS35565;product=hypothetical protein;protein_id=WP_155638185.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 13517 14059 . + . ID=gene-LDO49_RS35570;Name=LDO49_RS35570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35570;old_locus_tag=BCEP4_830020 NZ_CAJZAV010000294.1 GeneMarkS-2+ CDS 13517 14059 . + 0 ID=cds-WP_124475274.1;Parent=gene-LDO49_RS35570;Dbxref=GenBank:WP_124475274.1;Name=WP_124475274.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS35570;product=hypothetical protein;protein_id=WP_124475274.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 14415 15362 . - . ID=gene-LDO49_RS35575;Name=LDO49_RS35575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35575;old_locus_tag=BCEP4_830022 NZ_CAJZAV010000294.1 Protein Homology CDS 14415 15362 . - 0 ID=cds-WP_060148376.1;Parent=gene-LDO49_RS35575;Dbxref=GenBank:WP_060148376.1;Name=WP_060148376.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013587879.1;locus_tag=LDO49_RS35575;product=LysR family transcriptional regulator;protein_id=WP_060148376.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 15499 16263 . + . ID=gene-LDO49_RS35580;Name=LDO49_RS35580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35580;old_locus_tag=BCEP4_830023 NZ_CAJZAV010000294.1 Protein Homology CDS 15499 16263 . + 0 ID=cds-WP_048028700.1;Parent=gene-LDO49_RS35580;Dbxref=GenBank:WP_048028700.1;Name=WP_048028700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013338973.1;locus_tag=LDO49_RS35580;product=SDR family oxidoreductase;protein_id=WP_048028700.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 16338 17129 . + . ID=gene-LDO49_RS35585;Name=LDO49_RS35585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35585;old_locus_tag=BCEP4_830024 NZ_CAJZAV010000294.1 Protein Homology CDS 16338 17129 . + 0 ID=cds-WP_059484484.1;Parent=gene-LDO49_RS35585;Dbxref=GenBank:WP_059484484.1;Name=WP_059484484.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020068767.1;locus_tag=LDO49_RS35585;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_059484484.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 17292 18188 . - . ID=gene-LDO49_RS35590;Name=LDO49_RS35590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35590;old_locus_tag=BCEP4_830025 NZ_CAJZAV010000294.1 Protein Homology CDS 17292 18188 . - 0 ID=cds-WP_060148374.1;Parent=gene-LDO49_RS35590;Dbxref=GenBank:WP_060148374.1;Name=WP_060148374.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008920971.1;locus_tag=LDO49_RS35590;product=helix-turn-helix transcriptional regulator;protein_id=WP_060148374.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 18262 18759 . + . ID=gene-LDO49_RS35595;Name=LDO49_RS35595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35595;old_locus_tag=BCEP4_830026 NZ_CAJZAV010000294.1 Protein Homology CDS 18262 18759 . + 0 ID=cds-WP_059854540.1;Parent=gene-LDO49_RS35595;Dbxref=GenBank:WP_059854540.1;Name=WP_059854540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006463654.1;locus_tag=LDO49_RS35595;product=hypothetical protein;protein_id=WP_059854540.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 18833 19171 . + . ID=gene-LDO49_RS35600;Name=LDO49_RS35600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35600;old_locus_tag=BCEP4_830027 NZ_CAJZAV010000294.1 GeneMarkS-2+ CDS 18833 19171 . + 0 ID=cds-WP_124537206.1;Parent=gene-LDO49_RS35600;Dbxref=GenBank:WP_124537206.1;Name=WP_124537206.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS35600;product=hypothetical protein;protein_id=WP_124537206.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 19547 20506 . - . ID=gene-LDO49_RS35605;Name=LDO49_RS35605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35605;old_locus_tag=BCEP4_830028 NZ_CAJZAV010000294.1 Protein Homology CDS 19547 20506 . - 0 ID=cds-WP_081079527.1;Parent=gene-LDO49_RS35605;Dbxref=GenBank:WP_081079527.1;Name=WP_081079527.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025844.6;locus_tag=LDO49_RS35605;product=DUF4435 domain-containing protein;protein_id=WP_081079527.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 20512 21951 . - . ID=gene-LDO49_RS35610;Name=LDO49_RS35610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35610;old_locus_tag=BCEP4_830029 NZ_CAJZAV010000294.1 Protein Homology CDS 20512 21951 . - 0 ID=cds-WP_185633937.1;Parent=gene-LDO49_RS35610;Dbxref=GenBank:WP_185633937.1;Name=WP_185633937.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF024573.6;locus_tag=LDO49_RS35610;product=AAA family ATPase;protein_id=WP_185633937.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 22234 23364 . - . ID=gene-LDO49_RS35615;Name=LDO49_RS35615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35615;old_locus_tag=BCEP4_830031 NZ_CAJZAV010000294.1 Protein Homology CDS 22234 23364 . - 0 ID=cds-WP_155638184.1;Parent=gene-LDO49_RS35615;Dbxref=GenBank:WP_155638184.1;Name=WP_155638184.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF013866.6;locus_tag=LDO49_RS35615;product=alpha/beta hydrolase family protein;protein_id=WP_155638184.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 23292 25541 . - . ID=gene-LDO49_RS35620;Name=LDO49_RS35620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35620;old_locus_tag=BCEP4_830032 NZ_CAJZAV010000294.1 Protein Homology CDS 23292 25541 . - 0 ID=cds-WP_224052844.1;Parent=gene-LDO49_RS35620;Dbxref=GenBank:WP_224052844.1;Name=WP_224052844.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349556.1;locus_tag=LDO49_RS35620;product=TonB-dependent siderophore receptor;protein_id=WP_224052844.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 25844 26551 . + . ID=gene-LDO49_RS35625;Name=LDO49_RS35625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35625;old_locus_tag=BCEP4_830033 NZ_CAJZAV010000294.1 Protein Homology CDS 25844 26551 . + 0 ID=cds-WP_021164174.1;Parent=gene-LDO49_RS35625;Dbxref=GenBank:WP_021164174.1;Name=WP_021164174.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349555.1;locus_tag=LDO49_RS35625;product=FadR/GntR family transcriptional regulator;protein_id=WP_021164174.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 26585 27607 . - . ID=gene-LDO49_RS35630;Name=LDO49_RS35630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35630;old_locus_tag=BCEP4_830034 NZ_CAJZAV010000294.1 Protein Homology CDS 26585 27607 . - 0 ID=cds-WP_060148366.1;Parent=gene-LDO49_RS35630;Dbxref=GenBank:WP_060148366.1;Name=WP_060148366.1;Ontology_term=GO:0008171;gbkey=CDS;go_function=O-methyltransferase activity|0008171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349554.1;locus_tag=LDO49_RS35630;product=methyltransferase;protein_id=WP_060148366.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 27685 28785 . - . ID=gene-LDO49_RS35635;Name=LDO49_RS35635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35635;old_locus_tag=BCEP4_830035 NZ_CAJZAV010000294.1 Protein Homology CDS 27685 28785 . - 0 ID=cds-WP_021164176.1;Parent=gene-LDO49_RS35635;Dbxref=GenBank:WP_021164176.1;Name=WP_021164176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331008.1;locus_tag=LDO49_RS35635;product=3-dehydroquinate synthase II family protein;protein_id=WP_021164176.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 28972 29799 . - . ID=gene-LDO49_RS38440;Name=LDO49_RS38440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38440;old_locus_tag=BCEP4_830036;partial=true;start_range=.,28972 NZ_CAJZAV010000294.1 Protein Homology CDS 28972 29799 . - 0 ID=cds-WP_443798028.1;Parent=gene-LDO49_RS38440;Dbxref=GenBank:WP_443798028.1;Name=WP_443798028.1;Ontology_term=GO:0009073,GO:0003856,GO:0016491;gbkey=CDS;go_function=3-dehydroquinate synthase activity|0003856||IEA,oxidoreductase activity|0016491||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349552.1;locus_tag=LDO49_RS38440;partial=true;product=3-dehydroquinate synthase II;protein_id=WP_443798028.1;start_range=.,28972;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 29852 30652 . - . ID=gene-LDO49_RS35640;Name=LDO49_RS35640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35640;old_locus_tag=BCEP4_830037 NZ_CAJZAV010000294.1 Protein Homology CDS 29852 30652 . - 0 ID=cds-WP_081079525.1;Parent=gene-LDO49_RS35640;Dbxref=GenBank:WP_081079525.1;Name=WP_081079525.1;Ontology_term=GO:0004332;gbkey=CDS;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349551.1;locus_tag=LDO49_RS35640;product=2-amino-3%2C7-dideoxy-D-threo-hept-6-ulosonate synthase;protein_id=WP_081079525.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 30938 31984 . + . ID=gene-LDO49_RS35645;Name=LDO49_RS35645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35645;old_locus_tag=BCEP4_830038 NZ_CAJZAV010000294.1 Protein Homology CDS 30938 31984 . + 0 ID=cds-WP_230942759.1;Parent=gene-LDO49_RS35645;Dbxref=GenBank:WP_230942759.1;Name=WP_230942759.1;Ontology_term=GO:0010181,GO:0016491,GO:0070967;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,coenzyme F420 binding|0070967||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094362.1;locus_tag=LDO49_RS35645;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_230942759.1;transl_table=11 NZ_CAJZAV010000294.1 RefSeq gene 32025 32210 . + . ID=gene-LDO49_RS35650;Name=LDO49_RS35650;end_range=32210,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35650;partial=true NZ_CAJZAV010000294.1 Protein Homology CDS 32025 32210 . + 0 ID=cds-WP_224052846.1;Parent=gene-LDO49_RS35650;Dbxref=GenBank:WP_224052846.1;Name=WP_224052846.1;Ontology_term=GO:0016491;end_range=32210,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010121768.1;locus_tag=LDO49_RS35650;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_224052846.1;transl_table=11 ##sequence-region NZ_CAJZAV010000295.1 1 3044 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000295.1 RefSeq region 1 3044 . + . ID=NZ_CAJZAV010000295.1:1..3044;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_84 NZ_CAJZAV010000295.1 RefSeq gene 36 2258 . - . ID=gene-LDO49_RS35655;Name=LDO49_RS35655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35655;old_locus_tag=BCEP4_840001 NZ_CAJZAV010000295.1 Protein Homology CDS 36 2258 . - 0 ID=cds-WP_060071981.1;Parent=gene-LDO49_RS35655;Dbxref=GenBank:WP_060071981.1;Name=WP_060071981.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0046872,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA,metal ion binding|0046872||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547177.1;locus_tag=LDO49_RS35655;product=TonB-dependent siderophore receptor;protein_id=WP_060071981.1;transl_table=11 NZ_CAJZAV010000295.1 RefSeq gene 2372 3044 . - . ID=gene-LDO49_RS35660;Name=LDO49_RS35660;end_range=3044,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35660;old_locus_tag=BCEP4_840002;partial=true NZ_CAJZAV010000295.1 Protein Homology CDS 2372 3044 . - 1 ID=cds-WP_224052847.1;Parent=gene-LDO49_RS35660;Dbxref=GenBank:WP_224052847.1;Name=WP_224052847.1;Ontology_term=GO:0005524;end_range=3044,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009900926.1;locus_tag=LDO49_RS35660;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_224052847.1;transl_table=11 ##sequence-region NZ_CAJZAV010000296.1 1 28794 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000296.1 RefSeq region 1 28794 . + . ID=NZ_CAJZAV010000296.1:1..28794;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_85 NZ_CAJZAV010000296.1 RefSeq gene 1 337 . + . ID=gene-LDO49_RS35665;Name=LDO49_RS35665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35665;partial=true;start_range=.,1 NZ_CAJZAV010000296.1 Protein Homology CDS 1 337 . + 1 ID=cds-WP_224052848.1;Parent=gene-LDO49_RS35665;Dbxref=GenBank:WP_224052848.1;Name=WP_224052848.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492556.1;locus_tag=LDO49_RS35665;partial=true;product=transposase;protein_id=WP_224052848.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 851 1747 . + . ID=gene-LDO49_RS35670;Name=LDO49_RS35670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35670;old_locus_tag=BCEP4_850002 NZ_CAJZAV010000296.1 Protein Homology CDS 851 1747 . + 0 ID=cds-WP_048024754.1;Parent=gene-LDO49_RS35670;Dbxref=GenBank:WP_048024754.1;Name=WP_048024754.1;Ontology_term=GO:0006508,GO:0004177,GO:0016787,GO:0046872;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498833.1;locus_tag=LDO49_RS35670;product=M24 family metallopeptidase;protein_id=WP_048024754.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 1792 3579 . + . ID=gene-LDO49_RS35675;Name=LDO49_RS35675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35675;old_locus_tag=BCEP4_850003 NZ_CAJZAV010000296.1 Protein Homology CDS 1792 3579 . + 0 ID=cds-WP_060071961.1;Parent=gene-LDO49_RS35675;Dbxref=GenBank:WP_060071961.1;Name=WP_060071961.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480756.1;locus_tag=LDO49_RS35675;product=SDR family oxidoreductase;protein_id=WP_060071961.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 3610 4515 . + . ID=gene-LDO49_RS35680;Name=LDO49_RS35680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35680;old_locus_tag=BCEP4_850005 NZ_CAJZAV010000296.1 Protein Homology CDS 3610 4515 . + 0 ID=cds-WP_021163287.1;Parent=gene-LDO49_RS35680;Dbxref=GenBank:WP_021163287.1;Name=WP_021163287.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659373.1;locus_tag=LDO49_RS35680;product=metal-dependent hydrolase;protein_id=WP_021163287.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 4595 4882 . + . ID=gene-LDO49_RS35685;Name=LDO49_RS35685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35685;old_locus_tag=BCEP4_850006 NZ_CAJZAV010000296.1 Protein Homology CDS 4595 4882 . + 0 ID=cds-WP_224052849.1;Parent=gene-LDO49_RS35685;Dbxref=GenBank:WP_224052849.1;Name=WP_224052849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396466.1;locus_tag=LDO49_RS35685;product=hypothetical protein;protein_id=WP_224052849.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 5134 5511 . + . ID=gene-LDO49_RS35690;Name=LDO49_RS35690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35690;old_locus_tag=BCEP4_850007 NZ_CAJZAV010000296.1 Protein Homology CDS 5134 5511 . + 0 ID=cds-WP_060071963.1;Parent=gene-LDO49_RS35690;Dbxref=GenBank:WP_060071963.1;Name=WP_060071963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354314.1;locus_tag=LDO49_RS35690;product=DUF2917 domain-containing protein;protein_id=WP_060071963.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 5826 6203 . + . ID=gene-LDO49_RS35695;Name=LDO49_RS35695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35695;old_locus_tag=BCEP4_850009 NZ_CAJZAV010000296.1 Protein Homology CDS 5826 6203 . + 0 ID=cds-WP_021163284.1;Parent=gene-LDO49_RS35695;Dbxref=GenBank:WP_021163284.1;Name=WP_021163284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339616.1;locus_tag=LDO49_RS35695;product=DUF2917 domain-containing protein;protein_id=WP_021163284.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 6361 6639 . - . ID=gene-LDO49_RS35700;Name=LDO49_RS35700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35700;old_locus_tag=BCEP4_850011 NZ_CAJZAV010000296.1 Protein Homology CDS 6361 6639 . - 0 ID=cds-WP_006480752.1;Parent=gene-LDO49_RS35700;Dbxref=GenBank:WP_006480752.1;Name=WP_006480752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880698.1;locus_tag=LDO49_RS35700;product=hypothetical protein;protein_id=WP_006480752.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 6850 7329 . - . ID=gene-LDO49_RS35705;Name=LDO49_RS35705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35705 NZ_CAJZAV010000296.1 GeneMarkS-2+ CDS 6850 7329 . - 0 ID=cds-WP_224052850.1;Parent=gene-LDO49_RS35705;Dbxref=GenBank:WP_224052850.1;Name=WP_224052850.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS35705;product=hypothetical protein;protein_id=WP_224052850.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 7473 8774 . + . ID=gene-LDO49_RS35710;Name=LDO49_RS35710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35710;old_locus_tag=BCEP4_850014 NZ_CAJZAV010000296.1 Protein Homology CDS 7473 8774 . + 0 ID=cds-WP_021163282.1;Parent=gene-LDO49_RS35710;Dbxref=GenBank:WP_021163282.1;Name=WP_021163282.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009897941.1;locus_tag=LDO49_RS35710;product=NCS2 family permease;protein_id=WP_021163282.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 8865 9008 . - . ID=gene-LDO49_RS35715;Name=LDO49_RS35715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35715;old_locus_tag=BCEP4_850015 NZ_CAJZAV010000296.1 GeneMarkS-2+ CDS 8865 9008 . - 0 ID=cds-WP_224052851.1;Parent=gene-LDO49_RS35715;Dbxref=GenBank:WP_224052851.1;Name=WP_224052851.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS35715;product=tetratricopeptide repeat protein;protein_id=WP_224052851.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 9346 9633 . - . ID=gene-LDO49_RS35720;Name=LDO49_RS35720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35720;old_locus_tag=BCEP4_850017 NZ_CAJZAV010000296.1 Protein Homology CDS 9346 9633 . - 0 ID=cds-WP_011354308.1;Parent=gene-LDO49_RS35720;Dbxref=GenBank:WP_011354308.1;Name=WP_011354308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027738.1;locus_tag=LDO49_RS35720;product=DUF1488 domain-containing protein;protein_id=WP_011354308.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 9874 10065 . - . ID=gene-LDO49_RS35725;Name=LDO49_RS35725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35725;old_locus_tag=BCEP4_850018 NZ_CAJZAV010000296.1 Protein Homology CDS 9874 10065 . - 0 ID=cds-WP_011354307.1;Parent=gene-LDO49_RS35725;Dbxref=GenBank:WP_011354307.1;Name=WP_011354307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880705.1;locus_tag=LDO49_RS35725;product=DUF2964 family protein;protein_id=WP_011354307.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 10436 12340 . + . ID=gene-LDO49_RS35730;Name=LDO49_RS35730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35730;old_locus_tag=BCEP4_850019 NZ_CAJZAV010000296.1 Protein Homology CDS 10436 12340 . + 0 ID=cds-WP_048024757.1;Parent=gene-LDO49_RS35730;Dbxref=GenBank:WP_048024757.1;Name=WP_048024757.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749465.1;locus_tag=LDO49_RS35730;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_048024757.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 12423 12725 . + . ID=gene-LDO49_RS35735;Name=LDO49_RS35735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35735;old_locus_tag=BCEP4_850020 NZ_CAJZAV010000296.1 Protein Homology CDS 12423 12725 . + 0 ID=cds-WP_060071967.1;Parent=gene-LDO49_RS35735;Dbxref=GenBank:WP_060071967.1;Name=WP_060071967.1;Ontology_term=GO:0009055,GO:0051537;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486753.1;locus_tag=LDO49_RS35735;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_060071967.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 12782 13282 . + . ID=gene-LDO49_RS35740;Name=LDO49_RS35740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35740;old_locus_tag=BCEP4_850022 NZ_CAJZAV010000296.1 Protein Homology CDS 12782 13282 . + 0 ID=cds-WP_060071969.1;Parent=gene-LDO49_RS35740;Dbxref=GenBank:WP_060071969.1;Name=WP_060071969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659385.1;locus_tag=LDO49_RS35740;product=SRPBCC family protein;protein_id=WP_060071969.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 13375 13752 . + . ID=gene-LDO49_RS35745;Name=LDO49_RS35745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35745;old_locus_tag=BCEP4_850021 NZ_CAJZAV010000296.1 Protein Homology CDS 13375 13752 . + 0 ID=cds-WP_059485185.1;Parent=gene-LDO49_RS35745;Dbxref=GenBank:WP_059485185.1;Name=WP_059485185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339613.1;locus_tag=LDO49_RS35745;product=DUF2946 domain-containing protein;protein_id=WP_059485185.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 14055 14420 . + . ID=gene-LDO49_RS35750;Name=LDO49_RS35750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35750;old_locus_tag=BCEP4_850023 NZ_CAJZAV010000296.1 Protein Homology CDS 14055 14420 . + 0 ID=cds-WP_060071971.1;Parent=gene-LDO49_RS35750;Dbxref=GenBank:WP_060071971.1;Name=WP_060071971.1;Ontology_term=GO:0046688,GO:0005507,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_function=copper ion binding|0005507||IEA;go_process=response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354302.1;locus_tag=LDO49_RS35750;product=copper resistance CopC family protein;protein_id=WP_060071971.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 14502 14948 . + . ID=gene-LDO49_RS35755;Name=LDO49_RS35755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35755;old_locus_tag=BCEP4_850024 NZ_CAJZAV010000296.1 Protein Homology CDS 14502 14948 . + 0 ID=cds-WP_059485187.1;Parent=gene-LDO49_RS35755;Dbxref=GenBank:WP_059485187.1;Name=WP_059485187.1;Ontology_term=GO:0016531;gbkey=CDS;go_function=copper chaperone activity|0016531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366652.1;locus_tag=LDO49_RS35755;product=copper chaperone PCu(A)C;protein_id=WP_059485187.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 14980 15153 . + . ID=gene-LDO49_RS35760;Name=LDO49_RS35760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35760;old_locus_tag=BCEP4_850025 NZ_CAJZAV010000296.1 Protein Homology CDS 14980 15153 . + 0 ID=cds-WP_021163271.1;Parent=gene-LDO49_RS35760;Dbxref=GenBank:WP_021163271.1;Name=WP_021163271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486739.1;locus_tag=LDO49_RS35760;product=hypothetical protein;protein_id=WP_021163271.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 15252 15881 . + . ID=gene-LDO49_RS35765;Name=LDO49_RS35765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35765;old_locus_tag=BCEP4_850026 NZ_CAJZAV010000296.1 Protein Homology CDS 15252 15881 . + 0 ID=cds-WP_060071973.1;Parent=gene-LDO49_RS35765;Dbxref=GenBank:WP_060071973.1;Name=WP_060071973.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498820.1;locus_tag=LDO49_RS35765;product=LysE family translocator;protein_id=WP_060071973.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 15922 17247 . - . ID=gene-LDO49_RS35770;Name=LDO49_RS35770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35770;old_locus_tag=BCEP4_850027 NZ_CAJZAV010000296.1 Protein Homology CDS 15922 17247 . - 0 ID=cds-WP_060072103.1;Parent=gene-LDO49_RS35770;Dbxref=GenBank:WP_060072103.1;Name=WP_060072103.1;Ontology_term=GO:0006468,GO:0005515,GO:0005524;gbkey=CDS;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480742.1;locus_tag=LDO49_RS35770;product=leucine-rich repeat-containing protein kinase family protein;protein_id=WP_060072103.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 17399 17483 . + . ID=gene-LDO49_RS35775;Name=LDO49_RS35775;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS35775;old_locus_tag=BCEP4_TRNA17 NZ_CAJZAV010000296.1 tRNAscan-SE tRNA 17399 17483 . + . ID=rna-LDO49_RS35775;Parent=gene-LDO49_RS35775;anticodon=(pos:17433..17435);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS35775;product=tRNA-Leu NZ_CAJZAV010000296.1 tRNAscan-SE exon 17399 17483 . + . ID=exon-LDO49_RS35775-1;Parent=rna-LDO49_RS35775;anticodon=(pos:17433..17435);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS35775;product=tRNA-Leu NZ_CAJZAV010000296.1 RefSeq gene 17932 18183 . - . ID=gene-LDO49_RS35780;Name=LDO49_RS35780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35780 NZ_CAJZAV010000296.1 Protein Homology CDS 17932 18183 . - 0 ID=cds-WP_042977768.1;Parent=gene-LDO49_RS35780;Dbxref=GenBank:WP_042977768.1;Name=WP_042977768.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478883.1;locus_tag=LDO49_RS35780;product=PAAR domain-containing protein;protein_id=WP_042977768.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 18246 18731 . - . ID=gene-LDO49_RS35785;Name=LDO49_RS35785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35785;old_locus_tag=BCEP4_850030 NZ_CAJZAV010000296.1 GeneMarkS-2+ CDS 18246 18731 . - 0 ID=cds-WP_059485189.1;Parent=gene-LDO49_RS35785;Dbxref=GenBank:WP_059485189.1;Name=WP_059485189.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS35785;product=hypothetical protein;protein_id=WP_059485189.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 18728 20512 . - . ID=gene-LDO49_RS35790;Name=LDO49_RS35790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35790;old_locus_tag=BCEP4_850031 NZ_CAJZAV010000296.1 GeneMarkS-2+ CDS 18728 20512 . - 0 ID=cds-WP_059619403.1;Parent=gene-LDO49_RS35790;Dbxref=GenBank:WP_059619403.1;Name=WP_059619403.1;Ontology_term=GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS35790;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_059619403.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 20516 21094 . - . ID=gene-LDO49_RS35795;Name=LDO49_RS35795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35795;old_locus_tag=BCEP4_850032 NZ_CAJZAV010000296.1 GeneMarkS-2+ CDS 20516 21094 . - 0 ID=cds-WP_060071975.1;Parent=gene-LDO49_RS35795;Dbxref=GenBank:WP_060071975.1;Name=WP_060071975.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS35795;product=hypothetical protein;protein_id=WP_060071975.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 21091 23841 . - . ID=gene-LDO49_RS35800;Name=LDO49_RS35800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35800;old_locus_tag=BCEP4_850033 NZ_CAJZAV010000296.1 Protein Homology CDS 21091 23841 . - 0 ID=cds-WP_124475123.1;Parent=gene-LDO49_RS35800;Dbxref=GenBank:WP_124475123.1;Name=WP_124475123.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689773.1;locus_tag=LDO49_RS35800;product=type VI secretion system Vgr family protein;protein_id=WP_124475123.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 24513 25403 . - . ID=gene-LDO49_RS35805;Name=LDO49_RS35805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35805;old_locus_tag=BCEP4_850034 NZ_CAJZAV010000296.1 Protein Homology CDS 24513 25403 . - 0 ID=cds-WP_059588732.1;Parent=gene-LDO49_RS35805;Dbxref=GenBank:WP_059588732.1;Name=WP_059588732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339608.1;locus_tag=LDO49_RS35805;product=LysR substrate-binding domain-containing protein;protein_id=WP_059588732.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 25542 26783 . + . ID=gene-LDO49_RS35810;Name=LDO49_RS35810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35810;old_locus_tag=BCEP4_850035 NZ_CAJZAV010000296.1 Protein Homology CDS 25542 26783 . + 0 ID=cds-WP_060071977.1;Parent=gene-LDO49_RS35810;Dbxref=GenBank:WP_060071977.1;Name=WP_060071977.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486714.1;locus_tag=LDO49_RS35810;product=MFS transporter;protein_id=WP_060071977.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq gene 26893 28140 . - . ID=gene-LDO49_RS35815;Name=LDO49_RS35815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35815;old_locus_tag=BCEP4_850036 NZ_CAJZAV010000296.1 Protein Homology CDS 26893 28140 . - 0 ID=cds-WP_048024808.1;Parent=gene-LDO49_RS35815;Dbxref=GenBank:WP_048024808.1;Name=WP_048024808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339606.1;locus_tag=LDO49_RS35815;product=MFS transporter;protein_id=WP_048024808.1;transl_table=11 NZ_CAJZAV010000296.1 RefSeq pseudogene 28163 28582 . - . ID=gene-LDO49_RS37460;Name=LDO49_RS37460;end_range=28582,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37460;old_locus_tag=BCEP4_850037;partial=true;pseudo=true NZ_CAJZAV010000296.1 Protein Homology CDS 28163 28582 . - 0 ID=cds-LDO49_RS37460;Parent=gene-LDO49_RS37460;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=28582,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498816.1;locus_tag=LDO49_RS37460;partial=true;product=PepSY-associated TM helix domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAV010000296.1 RefSeq pseudogene 28593 28794 . - . ID=gene-LDO49_RS38445;Name=LDO49_RS38445;end_range=28794,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38445;old_locus_tag=BCEP4_850038;partial=true;pseudo=true;start_range=.,28593 NZ_CAJZAV010000296.1 Protein Homology CDS 28593 28794 . - 1 ID=cds-LDO49_RS38445;Parent=gene-LDO49_RS38445;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=28794,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852831.1;locus_tag=LDO49_RS38445;partial=true;product=PepSY-associated TM helix domain-containing protein;pseudo=true;start_range=.,28593;transl_table=11 ##sequence-region NZ_CAJZAV010000297.1 1 20515 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000297.1 RefSeq region 1 20515 . + . ID=NZ_CAJZAV010000297.1:1..20515;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_86 NZ_CAJZAV010000297.1 RefSeq pseudogene 1 303 . + . ID=gene-LDO49_RS35825;Name=LDO49_RS35825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS35825;old_locus_tag=BCEP4_860001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000297.1 Protein Homology CDS 1 303 . + 0 ID=cds-LDO49_RS35825;Parent=gene-LDO49_RS35825;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217912.1;locus_tag=LDO49_RS35825;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 300 965 . + . ID=gene-LDO49_RS35830;Name=LDO49_RS35830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35830;old_locus_tag=BCEP4_860002 NZ_CAJZAV010000297.1 Protein Homology CDS 300 965 . + 0 ID=cds-WP_059587625.1;Parent=gene-LDO49_RS35830;Dbxref=GenBank:WP_059587625.1;Name=WP_059587625.1;Ontology_term=GO:0008873,GO:0008875;gbkey=CDS;go_function=gluconate 2-dehydrogenase activity|0008873||IEA,gluconate dehydrogenase activity|0008875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851141.1;locus_tag=LDO49_RS35830;product=gluconate 2-dehydrogenase subunit 3 family protein;protein_id=WP_059587625.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 955 2625 . + . ID=gene-LDO49_RS35835;Name=LDO49_RS35835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35835;old_locus_tag=BCEP4_860003 NZ_CAJZAV010000297.1 Protein Homology CDS 955 2625 . + 0 ID=cds-WP_224052853.1;Parent=gene-LDO49_RS35835;Dbxref=GenBank:WP_224052853.1;Name=WP_224052853.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405142.1;locus_tag=LDO49_RS35835;product=GMC family oxidoreductase;protein_id=WP_224052853.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 2714 3097 . + . ID=gene-LDO49_RS35840;Name=copM;gbkey=Gene;gene=copM;gene_biotype=protein_coding;locus_tag=LDO49_RS35840;old_locus_tag=BCEP4_860004 NZ_CAJZAV010000297.1 Protein Homology CDS 2714 3097 . + 0 ID=cds-WP_059813481.1;Parent=gene-LDO49_RS35840;Dbxref=GenBank:WP_059813481.1;Name=WP_059813481.1;Ontology_term=GO:0055070,GO:0016530;gbkey=CDS;gene=copM;go_function=metallochaperone activity|0016530||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336691.1;locus_tag=LDO49_RS35840;product=CopM family metallochaperone;protein_id=WP_059813481.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 3231 3743 . + . ID=gene-LDO49_RS35845;Name=LDO49_RS35845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35845;old_locus_tag=BCEP4_860005 NZ_CAJZAV010000297.1 Protein Homology CDS 3231 3743 . + 0 ID=cds-WP_021158193.1;Parent=gene-LDO49_RS35845;Dbxref=GenBank:WP_021158193.1;Name=WP_021158193.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483457.1;locus_tag=LDO49_RS35845;product=low affinity iron permease family protein;protein_id=WP_021158193.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 3965 4441 . + . ID=gene-LDO49_RS35850;Name=LDO49_RS35850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35850;old_locus_tag=BCEP4_860006 NZ_CAJZAV010000297.1 Protein Homology CDS 3965 4441 . + 0 ID=cds-WP_059555694.1;Parent=gene-LDO49_RS35850;Dbxref=GenBank:WP_059555694.1;Name=WP_059555694.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493752.1;locus_tag=LDO49_RS35850;product=BON domain-containing protein;protein_id=WP_059555694.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 4554 5036 . + . ID=gene-LDO49_RS35855;Name=LDO49_RS35855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35855;old_locus_tag=BCEP4_860007 NZ_CAJZAV010000297.1 Protein Homology CDS 4554 5036 . + 0 ID=cds-WP_224052854.1;Parent=gene-LDO49_RS35855;Dbxref=GenBank:WP_224052854.1;Name=WP_224052854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691529.1;locus_tag=LDO49_RS35855;product=DUF1641 domain-containing protein;protein_id=WP_224052854.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 5175 6548 . + . ID=gene-LDO49_RS35860;Name=LDO49_RS35860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35860;old_locus_tag=BCEP4_860008 NZ_CAJZAV010000297.1 Protein Homology CDS 5175 6548 . + 0 ID=cds-WP_224052855.1;Parent=gene-LDO49_RS35860;Dbxref=GenBank:WP_224052855.1;Name=WP_224052855.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545489.1;locus_tag=LDO49_RS35860;product=HlyD family secretion protein;protein_id=WP_224052855.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 6649 8241 . + . ID=gene-LDO49_RS35865;Name=LDO49_RS35865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35865;old_locus_tag=BCEP4_860009 NZ_CAJZAV010000297.1 Protein Homology CDS 6649 8241 . + 0 ID=cds-WP_059677952.1;Parent=gene-LDO49_RS35865;Dbxref=GenBank:WP_059677952.1;Name=WP_059677952.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410205.1;locus_tag=LDO49_RS35865;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_059677952.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 8243 9871 . + . ID=gene-LDO49_RS35870;Name=LDO49_RS35870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35870;old_locus_tag=BCEP4_860010 NZ_CAJZAV010000297.1 Protein Homology CDS 8243 9871 . + 0 ID=cds-WP_224052856.1;Parent=gene-LDO49_RS35870;Dbxref=GenBank:WP_224052856.1;Name=WP_224052856.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336699.1;locus_tag=LDO49_RS35870;product=efflux transporter outer membrane subunit;protein_id=WP_224052856.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 9945 10181 . - . ID=gene-LDO49_RS35875;Name=LDO49_RS35875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35875;old_locus_tag=BCEP4_860011 NZ_CAJZAV010000297.1 GeneMarkS-2+ CDS 9945 10181 . - 0 ID=cds-WP_224052857.1;Parent=gene-LDO49_RS35875;Dbxref=GenBank:WP_224052857.1;Name=WP_224052857.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS35875;product=hypothetical protein;protein_id=WP_224052857.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 10399 10767 . + . ID=gene-LDO49_RS35880;Name=LDO49_RS35880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35880;old_locus_tag=BCEP4_860013 NZ_CAJZAV010000297.1 Protein Homology CDS 10399 10767 . + 0 ID=cds-WP_224052858.1;Parent=gene-LDO49_RS35880;Dbxref=GenBank:WP_224052858.1;Name=WP_224052858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498255.1;locus_tag=LDO49_RS35880;product=hypothetical protein;protein_id=WP_224052858.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 10803 11024 . + . ID=gene-LDO49_RS35885;Name=LDO49_RS35885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35885;old_locus_tag=BCEP4_860012 NZ_CAJZAV010000297.1 Protein Homology CDS 10803 11024 . + 0 ID=cds-WP_059485829.1;Parent=gene-LDO49_RS35885;Dbxref=GenBank:WP_059485829.1;Name=WP_059485829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490674.1;locus_tag=LDO49_RS35885;product=hypothetical protein;protein_id=WP_059485829.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 11048 11587 . - . ID=gene-LDO49_RS35890;Name=LDO49_RS35890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35890;old_locus_tag=BCEP4_860014 NZ_CAJZAV010000297.1 Protein Homology CDS 11048 11587 . - 0 ID=cds-WP_048028920.1;Parent=gene-LDO49_RS35890;Dbxref=GenBank:WP_048028920.1;Name=WP_048028920.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490675.1;locus_tag=LDO49_RS35890;product=GNAT family N-acetyltransferase;protein_id=WP_048028920.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 11968 12969 . + . ID=gene-LDO49_RS35895;Name=LDO49_RS35895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35895;old_locus_tag=BCEP4_860015 NZ_CAJZAV010000297.1 Protein Homology CDS 11968 12969 . + 0 ID=cds-WP_124475594.1;Parent=gene-LDO49_RS35895;Dbxref=GenBank:WP_124475594.1;Name=WP_124475594.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349746.1;locus_tag=LDO49_RS35895;product=AraC family transcriptional regulator;protein_id=WP_124475594.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 13245 13787 . - . ID=gene-LDO49_RS35900;Name=LDO49_RS35900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35900;old_locus_tag=BCEP4_860016 NZ_CAJZAV010000297.1 Protein Homology CDS 13245 13787 . - 0 ID=cds-WP_059492739.1;Parent=gene-LDO49_RS35900;Dbxref=GenBank:WP_059492739.1;Name=WP_059492739.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007576714.1;locus_tag=LDO49_RS35900;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_059492739.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 13927 14148 . - . ID=gene-LDO49_RS35905;Name=LDO49_RS35905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35905;old_locus_tag=BCEP4_860017 NZ_CAJZAV010000297.1 Protein Homology CDS 13927 14148 . - 0 ID=cds-WP_021158205.1;Parent=gene-LDO49_RS35905;Dbxref=GenBank:WP_021158205.1;Name=WP_021158205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336703.1;locus_tag=LDO49_RS35905;product=hypothetical protein;protein_id=WP_021158205.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 14212 14475 . - . ID=gene-LDO49_RS35910;Name=LDO49_RS35910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35910;old_locus_tag=BCEP4_860018 NZ_CAJZAV010000297.1 Protein Homology CDS 14212 14475 . - 0 ID=cds-WP_042973918.1;Parent=gene-LDO49_RS35910;Dbxref=GenBank:WP_042973918.1;Name=WP_042973918.1;Ontology_term=GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349749.1;locus_tag=LDO49_RS35910;product=HPr family phosphocarrier protein;protein_id=WP_042973918.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 14841 15185 . + . ID=gene-LDO49_RS35915;Name=LDO49_RS35915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35915;old_locus_tag=BCEP4_860019 NZ_CAJZAV010000297.1 Protein Homology CDS 14841 15185 . + 0 ID=cds-WP_021158207.1;Parent=gene-LDO49_RS35915;Dbxref=GenBank:WP_021158207.1;Name=WP_021158207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893416.1;locus_tag=LDO49_RS35915;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_021158207.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 15226 16062 . + . ID=gene-LDO49_RS35920;Name=LDO49_RS35920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35920;old_locus_tag=BCEP4_860020 NZ_CAJZAV010000297.1 Protein Homology CDS 15226 16062 . + 0 ID=cds-WP_059555676.1;Parent=gene-LDO49_RS35920;Dbxref=GenBank:WP_059555676.1;Name=WP_059555676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498246.1;locus_tag=LDO49_RS35920;product=hypothetical protein;protein_id=WP_059555676.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 16119 16304 . - . ID=gene-LDO49_RS35925;Name=LDO49_RS35925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35925;old_locus_tag=BCEP4_860021 NZ_CAJZAV010000297.1 Protein Homology CDS 16119 16304 . - 0 ID=cds-WP_021158209.1;Parent=gene-LDO49_RS35925;Dbxref=GenBank:WP_021158209.1;Name=WP_021158209.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489181.1;locus_tag=LDO49_RS35925;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_021158209.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 16411 17169 . - . ID=gene-LDO49_RS35930;Name=LDO49_RS35930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35930;old_locus_tag=BCEP4_860022 NZ_CAJZAV010000297.1 Protein Homology CDS 16411 17169 . - 0 ID=cds-WP_021158210.1;Parent=gene-LDO49_RS35930;Dbxref=GenBank:WP_021158210.1;Name=WP_021158210.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661419.1;locus_tag=LDO49_RS35930;product=YoaK family protein;protein_id=WP_021158210.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 17421 17771 . + . ID=gene-LDO49_RS35935;Name=LDO49_RS35935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35935;old_locus_tag=BCEP4_860023 NZ_CAJZAV010000297.1 Protein Homology CDS 17421 17771 . + 0 ID=cds-WP_027792574.1;Parent=gene-LDO49_RS35935;Dbxref=GenBank:WP_027792574.1;Name=WP_027792574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752899.1;locus_tag=LDO49_RS35935;product=hypothetical protein;protein_id=WP_027792574.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 17768 17980 . + . ID=gene-LDO49_RS35940;Name=LDO49_RS35940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35940;old_locus_tag=BCEP4_860024 NZ_CAJZAV010000297.1 Protein Homology CDS 17768 17980 . + 0 ID=cds-WP_006489184.1;Parent=gene-LDO49_RS35940;Dbxref=GenBank:WP_006489184.1;Name=WP_006489184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489184.1;locus_tag=LDO49_RS35940;product=twin transmembrane helix small protein;protein_id=WP_006489184.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 18160 18477 . - . ID=gene-LDO49_RS35945;Name=LDO49_RS35945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35945;old_locus_tag=BCEP4_860025 NZ_CAJZAV010000297.1 Protein Homology CDS 18160 18477 . - 0 ID=cds-WP_060147913.1;Parent=gene-LDO49_RS35945;Dbxref=GenBank:WP_060147913.1;Name=WP_060147913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906958.1;locus_tag=LDO49_RS35945;product=hypothetical protein;protein_id=WP_060147913.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 18553 18789 . - . ID=gene-LDO49_RS35950;Name=LDO49_RS35950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35950;old_locus_tag=BCEP4_860026 NZ_CAJZAV010000297.1 Protein Homology CDS 18553 18789 . - 0 ID=cds-WP_060147915.1;Parent=gene-LDO49_RS35950;Dbxref=GenBank:WP_060147915.1;Name=WP_060147915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661270.1;locus_tag=LDO49_RS35950;product=hypothetical protein;protein_id=WP_060147915.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 19052 19264 . - . ID=gene-LDO49_RS35955;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LDO49_RS35955;old_locus_tag=BCEP4_860027 NZ_CAJZAV010000297.1 Protein Homology CDS 19052 19264 . - 0 ID=cds-WP_021158214.1;Parent=gene-LDO49_RS35955;Dbxref=GenBank:WP_021158214.1;Name=WP_021158214.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202502.1;locus_tag=LDO49_RS35955;product=30S ribosomal protein S21;protein_id=WP_021158214.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 19298 19507 . - . ID=gene-LDO49_RS35960;Name=LDO49_RS35960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35960;old_locus_tag=BCEP4_860028 NZ_CAJZAV010000297.1 Protein Homology CDS 19298 19507 . - 0 ID=cds-WP_042973949.1;Parent=gene-LDO49_RS35960;Dbxref=GenBank:WP_042973949.1;Name=WP_042973949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402909.1;locus_tag=LDO49_RS35960;product=hypothetical protein;protein_id=WP_042973949.1;transl_table=11 NZ_CAJZAV010000297.1 RefSeq gene 19555 19839 . - . ID=gene-LDO49_RS35965;Name=LDO49_RS35965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35965;old_locus_tag=BCEP4_860029 NZ_CAJZAV010000297.1 Protein Homology CDS 19555 19839 . - 0 ID=cds-WP_060147940.1;Parent=gene-LDO49_RS35965;Dbxref=GenBank:WP_060147940.1;Name=WP_060147940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009907042.1;locus_tag=LDO49_RS35965;product=hypothetical protein;protein_id=WP_060147940.1;transl_table=11 ##sequence-region NZ_CAJZAV010000298.1 1 1457 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000298.1 RefSeq region 1 1457 . + . ID=NZ_CAJZAV010000298.1:1..1457;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_87 NZ_CAJZAV010000298.1 RefSeq gene 21 1226 . - . ID=gene-LDO49_RS35970;Name=LDO49_RS35970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35970;old_locus_tag=BCEP4_870001 NZ_CAJZAV010000298.1 Protein Homology CDS 21 1226 . - 0 ID=cds-WP_060206316.1;Parent=gene-LDO49_RS35970;Dbxref=GenBank:WP_060206316.1;Name=WP_060206316.1;Ontology_term=GO:0006313,GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544710.1;locus_tag=LDO49_RS35970;product=IS110-like element ISBma3 family transposase;protein_id=WP_060206316.1;transl_table=11 ##sequence-region NZ_CAJZAV010000299.1 1 15069 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000299.1 RefSeq region 1 15069 . + . ID=NZ_CAJZAV010000299.1:1..15069;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_88 NZ_CAJZAV010000299.1 RefSeq gene 1 2391 . + . ID=gene-LDO49_RS35975;Name=LDO49_RS35975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35975;old_locus_tag=BCEP4_880002;partial=true;start_range=.,1 NZ_CAJZAV010000299.1 Protein Homology CDS 1 2391 . + 0 ID=cds-WP_224052859.1;Parent=gene-LDO49_RS35975;Dbxref=GenBank:WP_224052859.1;Name=WP_224052859.1;Ontology_term=GO:0007155,GO:0015031;gbkey=CDS;go_process=cell adhesion|0007155||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659538.1;locus_tag=LDO49_RS35975;partial=true;product=YadA family autotransporter adhesin;protein_id=WP_224052859.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000299.1 RefSeq gene 2394 3293 . + . ID=gene-LDO49_RS35980;Name=LDO49_RS35980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35980 NZ_CAJZAV010000299.1 Protein Homology CDS 2394 3293 . + 0 ID=cds-WP_224052860.1;Parent=gene-LDO49_RS35980;Dbxref=GenBank:WP_224052860.1;Name=WP_224052860.1;Ontology_term=GO:0071111;gbkey=CDS;go_function=cyclic-guanylate-specific phosphodiesterase activity|0071111||IEA;inference=COORDINATES: protein motif:HMM:NF012772.6;locus_tag=LDO49_RS35980;product=EAL domain-containing protein;protein_id=WP_224052860.1;transl_table=11 NZ_CAJZAV010000299.1 RefSeq gene 3445 4128 . - . ID=gene-LDO49_RS35985;Name=LDO49_RS35985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35985;old_locus_tag=BCEP4_880005 NZ_CAJZAV010000299.1 Protein Homology CDS 3445 4128 . - 0 ID=cds-WP_060074287.1;Parent=gene-LDO49_RS35985;Dbxref=GenBank:WP_060074287.1;Name=WP_060074287.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329282.1;locus_tag=LDO49_RS35985;product=GntR family transcriptional regulator;protein_id=WP_060074287.1;transl_table=11 NZ_CAJZAV010000299.1 RefSeq gene 5154 5882 . + . ID=gene-LDO49_RS35990;Name=LDO49_RS35990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35990;old_locus_tag=BCEP4_880007 NZ_CAJZAV010000299.1 Protein Homology CDS 5154 5882 . + 0 ID=cds-WP_253074698.1;Parent=gene-LDO49_RS35990;Dbxref=GenBank:WP_253074698.1;Name=WP_253074698.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329283.1;locus_tag=LDO49_RS35990;product=response regulator transcription factor;protein_id=WP_253074698.1;transl_table=11 NZ_CAJZAV010000299.1 RefSeq gene 6320 7525 . - . ID=gene-LDO49_RS35995;Name=LDO49_RS35995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS35995;old_locus_tag=BCEP4_880009 NZ_CAJZAV010000299.1 Protein Homology CDS 6320 7525 . - 0 ID=cds-WP_224052862.1;Parent=gene-LDO49_RS35995;Dbxref=GenBank:WP_224052862.1;Name=WP_224052862.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544710.1;locus_tag=LDO49_RS35995;product=IS110 family transposase;protein_id=WP_224052862.1;transl_table=11 NZ_CAJZAV010000299.1 RefSeq gene 7952 8356 . - . ID=gene-LDO49_RS36000;Name=LDO49_RS36000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36000 NZ_CAJZAV010000299.1 GeneMarkS-2+ CDS 7952 8356 . - 0 ID=cds-WP_224052863.1;Parent=gene-LDO49_RS36000;Dbxref=GenBank:WP_224052863.1;Name=WP_224052863.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS36000;product=hypothetical protein;protein_id=WP_224052863.1;transl_table=11 NZ_CAJZAV010000299.1 RefSeq gene 8452 8979 . + . ID=gene-LDO49_RS36005;Name=LDO49_RS36005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36005;old_locus_tag=BCEP4_880013 NZ_CAJZAV010000299.1 GeneMarkS-2+ CDS 8452 8979 . + 0 ID=cds-WP_224052864.1;Parent=gene-LDO49_RS36005;Dbxref=GenBank:WP_224052864.1;Name=WP_224052864.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS36005;product=hypothetical protein;protein_id=WP_224052864.1;transl_table=11 NZ_CAJZAV010000299.1 RefSeq gene 9073 9582 . + . ID=gene-LDO49_RS36010;Name=LDO49_RS36010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36010;old_locus_tag=BCEP4_880014 NZ_CAJZAV010000299.1 Protein Homology CDS 9073 9582 . + 0 ID=cds-WP_224052865.1;Parent=gene-LDO49_RS36010;Dbxref=GenBank:WP_224052865.1;Name=WP_224052865.1;Ontology_term=GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: protein motif:HMM:NF024793.6;locus_tag=LDO49_RS36010;product=AAA family ATPase;protein_id=WP_224052865.1;transl_table=11 NZ_CAJZAV010000299.1 RefSeq gene 10959 11666 . + . ID=gene-LDO49_RS36015;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=LDO49_RS36015;old_locus_tag=BCEP4_880017 NZ_CAJZAV010000299.1 Protein Homology CDS 10959 11666 . + 0 ID=cds-WP_081067307.1;Parent=gene-LDO49_RS36015;Dbxref=GenBank:WP_081067307.1;Name=WP_081067307.1;Ontology_term=GO:0006833,GO:0015250;gbkey=CDS;gene=aqpZ;go_function=water channel activity|0015250||IEA;go_process=water transport|0006833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751070.1;locus_tag=LDO49_RS36015;product=aquaporin Z;protein_id=WP_081067307.1;transl_table=11 NZ_CAJZAV010000299.1 RefSeq gene 13004 13821 . - . ID=gene-LDO49_RS36020;Name=LDO49_RS36020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36020 NZ_CAJZAV010000299.1 Protein Homology CDS 13473 13821 . - 0 ID=cds-WP_224052866.1;Parent=gene-LDO49_RS36020;Dbxref=GenBank:WP_224052866.1;Name=WP_224052866.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492354.1;locus_tag=LDO49_RS36020;product=IS5 family transposase;protein_id=WP_224052866.1;transl_table=11 NZ_CAJZAV010000299.1 Protein Homology CDS 13004 13473 . - 2 ID=cds-WP_224052866.1;Parent=gene-LDO49_RS36020;Dbxref=GenBank:WP_224052866.1;Name=WP_224052866.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492354.1;locus_tag=LDO49_RS36020;product=IS5 family transposase;protein_id=WP_224052866.1;transl_table=11 NZ_CAJZAV010000299.1 RefSeq gene 14210 15069 . + . ID=gene-LDO49_RS36025;Name=LDO49_RS36025;end_range=15069,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36025;partial=true NZ_CAJZAV010000299.1 Protein Homology CDS 14210 15069 . + 0 ID=cds-WP_290369904.1;Parent=gene-LDO49_RS36025;Dbxref=GenBank:WP_290369904.1;Name=WP_290369904.1;end_range=15069,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017476.6;locus_tag=LDO49_RS36025;partial=true;product=ESPR-type extended signal peptide-containing protein;protein_id=WP_290369904.1;transl_table=11 ##sequence-region NZ_CAJZAV010000300.1 1 28393 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000300.1 RefSeq region 1 28393 . + . ID=NZ_CAJZAV010000300.1:1..28393;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_89 NZ_CAJZAV010000300.1 RefSeq gene 1 1030 . + . ID=gene-LDO49_RS36030;Name=LDO49_RS36030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36030;old_locus_tag=BCEP4_890001;partial=true;start_range=.,1 NZ_CAJZAV010000300.1 Protein Homology CDS 1 1030 . + 1 ID=cds-WP_224052867.1;Parent=gene-LDO49_RS36030;Dbxref=GenBank:WP_224052867.1;Name=WP_224052867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879674.1;locus_tag=LDO49_RS36030;partial=true;product=thioredoxin family protein;protein_id=WP_224052867.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 1151 1846 . + . ID=gene-LDO49_RS36035;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=LDO49_RS36035;old_locus_tag=BCEP4_890002 NZ_CAJZAV010000300.1 Protein Homology CDS 1151 1846 . + 0 ID=cds-WP_224052872.1;Parent=gene-LDO49_RS36035;Dbxref=GenBank:WP_224052872.1;Name=WP_224052872.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481493.1;locus_tag=LDO49_RS36035;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_224052872.1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 2127 3242 . + . ID=gene-LDO49_RS36040;Name=LDO49_RS36040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36040;old_locus_tag=BCEP4_890004 NZ_CAJZAV010000300.1 Protein Homology CDS 2127 3242 . + 0 ID=cds-WP_042972892.1;Parent=gene-LDO49_RS36040;Dbxref=GenBank:WP_042972892.1;Name=WP_042972892.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545782.1;locus_tag=LDO49_RS36040;product=aromatic ring-hydroxylating oxygenase subunit alpha;protein_id=WP_042972892.1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 3275 3664 . - . ID=gene-LDO49_RS36045;Name=LDO49_RS36045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36045;old_locus_tag=BCEP4_890005 NZ_CAJZAV010000300.1 Protein Homology CDS 3275 3664 . - 0 ID=cds-WP_048029016.1;Parent=gene-LDO49_RS36045;Dbxref=GenBank:WP_048029016.1;Name=WP_048029016.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270;gbkey=CDS;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337201.1;locus_tag=LDO49_RS36045;product=cytidine deaminase;protein_id=WP_048029016.1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 3773 5089 . - . ID=gene-LDO49_RS36050;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=LDO49_RS36050;old_locus_tag=BCEP4_890006 NZ_CAJZAV010000300.1 Protein Homology CDS 3773 5089 . - 0 ID=cds-WP_060147549.1;Parent=gene-LDO49_RS36050;Dbxref=GenBank:WP_060147549.1;Name=WP_060147549.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337200.1;locus_tag=LDO49_RS36050;product=thymidine phosphorylase;protein_id=WP_060147549.1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 5128 6402 . - . ID=gene-LDO49_RS36055;Name=LDO49_RS36055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36055;old_locus_tag=BCEP4_890007 NZ_CAJZAV010000300.1 Protein Homology CDS 5128 6402 . - 0 ID=cds-WP_042972929.1;Parent=gene-LDO49_RS36055;Dbxref=GenBank:WP_042972929.1;Name=WP_042972929.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485647.1;locus_tag=LDO49_RS36055;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_042972929.1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 6751 8208 . - . ID=gene-LDO49_RS36060;Name=hydA;gbkey=Gene;gene=hydA;gene_biotype=protein_coding;locus_tag=LDO49_RS36060;old_locus_tag=BCEP4_890008 NZ_CAJZAV010000300.1 Protein Homology CDS 6751 8208 . - 0 ID=cds-WP_224052869.1;Parent=gene-LDO49_RS36060;Dbxref=GenBank:WP_224052869.1;Name=WP_224052869.1;Ontology_term=GO:0008152,GO:0004157,GO:0005737;gbkey=CDS;gene=hydA;go_component=cytoplasm|0005737||IEA;go_function=dihydropyrimidinase activity|0004157||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485639.1;locus_tag=LDO49_RS36060;product=dihydropyrimidinase;protein_id=WP_224052869.1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 8252 9760 . - . ID=gene-LDO49_RS36065;Name=LDO49_RS36065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36065;old_locus_tag=BCEP4_890009 NZ_CAJZAV010000300.1 Protein Homology CDS 8252 9760 . - 0 ID=cds-WP_060154396.1;Parent=gene-LDO49_RS36065;Dbxref=GenBank:WP_060154396.1;Name=WP_060154396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485642.1;locus_tag=LDO49_RS36065;product=NCS1 family nucleobase:cation symporter-1;protein_id=WP_060154396.1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 9863 11182 . - . ID=gene-LDO49_RS36070;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=LDO49_RS36070;old_locus_tag=BCEP4_890010 NZ_CAJZAV010000300.1 Protein Homology CDS 9863 11182 . - 0 ID=cds-WP_224052870.1;Parent=gene-LDO49_RS36070;Dbxref=GenBank:WP_224052870.1;Name=WP_224052870.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498606.1;locus_tag=LDO49_RS36070;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_224052870.1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 11253 12590 . - . ID=gene-LDO49_RS36075;Name=LDO49_RS36075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36075;old_locus_tag=BCEP4_890011 NZ_CAJZAV010000300.1 Protein Homology CDS 11253 12590 . - 0 ID=cds-WP_224052871.1;Parent=gene-LDO49_RS36075;Dbxref=GenBank:WP_224052871.1;Name=WP_224052871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725527.1;locus_tag=LDO49_RS36075;product=NAD(P)-dependent oxidoreductase;protein_id=WP_224052871.1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 12721 14001 . - . ID=gene-LDO49_RS36080;Name=LDO49_RS36080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36080;old_locus_tag=BCEP4_890012 NZ_CAJZAV010000300.1 Protein Homology CDS 12721 14001 . - 0 ID=cds-WP_021156778.1;Parent=gene-LDO49_RS36080;Dbxref=GenBank:WP_021156778.1;Name=WP_021156778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065405.1;locus_tag=LDO49_RS36080;product=Zn-dependent hydrolase;protein_id=WP_021156778.1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 14358 15050 . + . ID=gene-LDO49_RS36085;Name=LDO49_RS36085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36085;old_locus_tag=BCEP4_890013 NZ_CAJZAV010000300.1 Protein Homology CDS 14358 15050 . + 0 ID=cds-WP_021156775.1;Parent=gene-LDO49_RS36085;Dbxref=GenBank:WP_021156775.1;Name=WP_021156775.1;Ontology_term=GO:0045892;gbkey=CDS;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660854.1;locus_tag=LDO49_RS36085;product=TetR/AcrR family transcriptional regulator;protein_id=WP_021156775.1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 15193 16383 . - . ID=gene-LDO49_RS36090;Name=LDO49_RS36090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36090;old_locus_tag=BCEP4_890014 NZ_CAJZAV010000300.1 Protein Homology CDS 15193 16383 . - 0 ID=cds-WP_021156774.1;Parent=gene-LDO49_RS36090;Dbxref=GenBank:WP_021156774.1;Name=WP_021156774.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660855.1;locus_tag=LDO49_RS36090;product=acetyl-CoA C-acetyltransferase;protein_id=WP_021156774.1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 16402 17169 . - . ID=gene-LDO49_RS36095;Name=LDO49_RS36095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36095;old_locus_tag=BCEP4_890015 NZ_CAJZAV010000300.1 Protein Homology CDS 16402 17169 . - 0 ID=cds-WP_021156773.1;Parent=gene-LDO49_RS36095;Dbxref=GenBank:WP_021156773.1;Name=WP_021156773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483642.1;locus_tag=LDO49_RS36095;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_021156773.1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 17192 18859 . - . ID=gene-LDO49_RS36100;Name=LDO49_RS36100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36100;old_locus_tag=BCEP4_890016 NZ_CAJZAV010000300.1 Protein Homology CDS 17192 18859 . - 0 ID=cds-WP_124842835.1;Parent=gene-LDO49_RS36100;Dbxref=GenBank:WP_124842835.1;Name=WP_124842835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412360.1;locus_tag=LDO49_RS36100;product=acyl-CoA synthetase;protein_id=WP_124842835.1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 19004 20023 . + . ID=gene-LDO49_RS36105;Name=LDO49_RS36105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36105;old_locus_tag=BCEP4_890017 NZ_CAJZAV010000300.1 Protein Homology CDS 19004 20023 . + 0 ID=cds-WP_060147528.1;Parent=gene-LDO49_RS36105;Dbxref=GenBank:WP_060147528.1;Name=WP_060147528.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349343.1;locus_tag=LDO49_RS36105;product=AraC family transcriptional regulator;protein_id=WP_060147528.1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 20175 21428 . + . ID=gene-LDO49_RS36110;Name=LDO49_RS36110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36110;old_locus_tag=BCEP4_890018 NZ_CAJZAV010000300.1 Protein Homology CDS 20175 21428 . + 0 ID=cds-WP_060147527.1;Parent=gene-LDO49_RS36110;Dbxref=GenBank:WP_060147527.1;Name=WP_060147527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012746591.1;locus_tag=LDO49_RS36110;product=SMI1/KNR4 family protein;protein_id=WP_060147527.1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 21441 22847 . - . ID=gene-LDO49_RS36115;Name=LDO49_RS36115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36115;old_locus_tag=BCEP4_890019 NZ_CAJZAV010000300.1 Protein Homology CDS 21441 22847 . - 0 ID=cds-WP_060147526.1;Parent=gene-LDO49_RS36115;Dbxref=GenBank:WP_060147526.1;Name=WP_060147526.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349341.1;locus_tag=LDO49_RS36115;product=purine-cytosine permease family protein;protein_id=WP_060147526.1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 23147 24538 . - . ID=gene-LDO49_RS36120;Name=LDO49_RS36120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36120;old_locus_tag=BCEP4_890020 NZ_CAJZAV010000300.1 Protein Homology CDS 23147 24538 . - 0 ID=cds-WP_060147525.1;Parent=gene-LDO49_RS36120;Dbxref=GenBank:WP_060147525.1;Name=WP_060147525.1;Ontology_term=GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349340.1;locus_tag=LDO49_RS36120;product=aspartate aminotransferase family protein;protein_id=WP_060147525.1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 24619 26124 . - . ID=gene-LDO49_RS36125;Name=LDO49_RS36125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36125;old_locus_tag=BCEP4_890021 NZ_CAJZAV010000300.1 Protein Homology CDS 24619 26124 . - 0 ID=cds-WP_060147524.1;Parent=gene-LDO49_RS36125;Dbxref=GenBank:WP_060147524.1;Name=WP_060147524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349339.1;locus_tag=LDO49_RS36125;product=aldehyde dehydrogenase;protein_id=WP_060147524.1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 26121 26498 . - . ID=gene-LDO49_RS36130;Name=LDO49_RS36130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36130 NZ_CAJZAV010000300.1 GeneMarkS-2+ CDS 26121 26498 . - 0 ID=cds-WP_124475318.1;Parent=gene-LDO49_RS36130;Dbxref=GenBank:WP_124475318.1;Name=WP_124475318.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS36130;product=hypothetical protein;protein_id=WP_124475318.1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 26510 27109 . + . ID=gene-LDO49_RS36135;Name=LDO49_RS36135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36135;old_locus_tag=BCEP4_890022 NZ_CAJZAV010000300.1 Protein Homology CDS 26510 27109 . + 0 ID=cds-WP_059623754.1;Parent=gene-LDO49_RS36135;Dbxref=GenBank:WP_059623754.1;Name=WP_059623754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498613.1;locus_tag=LDO49_RS36135;product=hypothetical protein;protein_id=WP_059623754.1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 27199 27570 . + . ID=gene-LDO49_RS36140;Name=LDO49_RS36140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36140;old_locus_tag=BCEP4_890023 NZ_CAJZAV010000300.1 Protein Homology CDS 27199 27570 . + 0 ID=cds-WP_048029033.1;Parent=gene-LDO49_RS36140;Dbxref=GenBank:WP_048029033.1;Name=WP_048029033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337187.1;locus_tag=LDO49_RS36140;product=nuclear transport factor 2 family protein;protein_id=WP_048029033.1;transl_table=11 NZ_CAJZAV010000300.1 RefSeq gene 27683 28147 . + . ID=gene-LDO49_RS36145;Name=LDO49_RS36145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36145;old_locus_tag=BCEP4_890024 NZ_CAJZAV010000300.1 Protein Homology CDS 27683 28147 . + 0 ID=cds-WP_113045665.1;Parent=gene-LDO49_RS36145;Dbxref=GenBank:WP_113045665.1;Name=WP_113045665.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483647.1;locus_tag=LDO49_RS36145;product=GNAT family N-acetyltransferase;protein_id=WP_113045665.1;transl_table=11 ##sequence-region NZ_CAJZAV010000301.1 1 25949 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000301.1 RefSeq region 1 25949 . + . ID=NZ_CAJZAV010000301.1:1..25949;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_9 NZ_CAJZAV010000301.1 RefSeq gene 249 1169 . - . ID=gene-LDO49_RS36150;Name=LDO49_RS36150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36150;old_locus_tag=BCEP4_90001 NZ_CAJZAV010000301.1 Protein Homology CDS 249 1169 . - 0 ID=cds-WP_060148006.1;Parent=gene-LDO49_RS36150;Dbxref=GenBank:WP_060148006.1;Name=WP_060148006.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489183.1;locus_tag=LDO49_RS36150;product=AraC family transcriptional regulator;protein_id=WP_060148006.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 1309 2274 . + . ID=gene-LDO49_RS36155;Name=LDO49_RS36155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36155;old_locus_tag=BCEP4_90002 NZ_CAJZAV010000301.1 Protein Homology CDS 1309 2274 . + 0 ID=cds-WP_060147954.1;Parent=gene-LDO49_RS36155;Dbxref=GenBank:WP_060147954.1;Name=WP_060147954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489175.1;locus_tag=LDO49_RS36155;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_060147954.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 2826 3230 . - . ID=gene-LDO49_RS36160;Name=LDO49_RS36160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36160;old_locus_tag=BCEP4_90004 NZ_CAJZAV010000301.1 Protein Homology CDS 2826 3230 . - 0 ID=cds-WP_059855634.1;Parent=gene-LDO49_RS36160;Dbxref=GenBank:WP_059855634.1;Name=WP_059855634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012371971.1;locus_tag=LDO49_RS36160;product=cupin domain-containing protein;protein_id=WP_059855634.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 3235 3714 . - . ID=gene-LDO49_RS36165;Name=LDO49_RS36165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36165;old_locus_tag=BCEP4_90005 NZ_CAJZAV010000301.1 Protein Homology CDS 3235 3714 . - 0 ID=cds-WP_021158220.1;Parent=gene-LDO49_RS36165;Dbxref=GenBank:WP_021158220.1;Name=WP_021158220.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759573.1;locus_tag=LDO49_RS36165;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_021158220.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 3870 4370 . - . ID=gene-LDO49_RS36170;Name=LDO49_RS36170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36170;old_locus_tag=BCEP4_90006 NZ_CAJZAV010000301.1 Protein Homology CDS 3870 4370 . - 0 ID=cds-WP_059485816.1;Parent=gene-LDO49_RS36170;Dbxref=GenBank:WP_059485816.1;Name=WP_059485816.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660691.1;locus_tag=LDO49_RS36170;product=Ohr family peroxiredoxin;protein_id=WP_059485816.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 4666 5124 . - . ID=gene-LDO49_RS36175;Name=LDO49_RS36175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36175;old_locus_tag=BCEP4_90007 NZ_CAJZAV010000301.1 Protein Homology CDS 4666 5124 . - 0 ID=cds-WP_048028598.1;Parent=gene-LDO49_RS36175;Dbxref=GenBank:WP_048028598.1;Name=WP_048028598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018434838.1;locus_tag=LDO49_RS36175;product=MEKHLA domain-containing protein;protein_id=WP_048028598.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 5211 6014 . - . ID=gene-LDO49_RS36180;Name=LDO49_RS36180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36180;old_locus_tag=BCEP4_90008 NZ_CAJZAV010000301.1 Protein Homology CDS 5211 6014 . - 0 ID=cds-WP_224052873.1;Parent=gene-LDO49_RS36180;Dbxref=GenBank:WP_224052873.1;Name=WP_224052873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004528234.1;locus_tag=LDO49_RS36180;product=lipid II flippase Amj family protein;protein_id=WP_224052873.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 6237 7241 . - . ID=gene-LDO49_RS36185;Name=LDO49_RS36185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36185;old_locus_tag=BCEP4_90009 NZ_CAJZAV010000301.1 Protein Homology CDS 6237 7241 . - 0 ID=cds-WP_224052874.1;Parent=gene-LDO49_RS36185;Dbxref=GenBank:WP_224052874.1;Name=WP_224052874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012433402.1;locus_tag=LDO49_RS36185;product=DedA family protein/thiosulfate sulfurtransferase GlpE;protein_id=WP_224052874.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 7594 8595 . - . ID=gene-LDO49_RS36190;Name=LDO49_RS36190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36190;old_locus_tag=BCEP4_90010 NZ_CAJZAV010000301.1 Protein Homology CDS 7594 8595 . - 0 ID=cds-WP_224052875.1;Parent=gene-LDO49_RS36190;Dbxref=GenBank:WP_224052875.1;Name=WP_224052875.1;Ontology_term=GO:0005254;gbkey=CDS;go_function=chloride channel activity|0005254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754710.1;locus_tag=LDO49_RS36190;product=bestrophin family protein;protein_id=WP_224052875.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 8821 10029 . + . ID=gene-LDO49_RS36195;Name=LDO49_RS36195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36195;old_locus_tag=BCEP4_90011 NZ_CAJZAV010000301.1 Protein Homology CDS 8821 10029 . + 0 ID=cds-WP_224052876.1;Parent=gene-LDO49_RS36195;Dbxref=GenBank:WP_224052876.1;Name=WP_224052876.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006047581.1;locus_tag=LDO49_RS36195;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_224052876.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 10138 10638 . - . ID=gene-LDO49_RS36200;Name=LDO49_RS36200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36200;old_locus_tag=BCEP4_90012 NZ_CAJZAV010000301.1 Protein Homology CDS 10138 10638 . - 0 ID=cds-WP_224052877.1;Parent=gene-LDO49_RS36200;Dbxref=GenBank:WP_224052877.1;Name=WP_224052877.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013591981.1;locus_tag=LDO49_RS36200;product=Ohr family peroxiredoxin;protein_id=WP_224052877.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 10931 12448 . - . ID=gene-LDO49_RS36205;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=LDO49_RS36205;old_locus_tag=BCEP4_90013 NZ_CAJZAV010000301.1 Protein Homology CDS 10931 12448 . - 0 ID=cds-WP_224052878.1;Parent=gene-LDO49_RS36205;Dbxref=GenBank:WP_224052878.1;Name=WP_224052878.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660686.1;locus_tag=LDO49_RS36205;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_224052878.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 12641 13384 . + . ID=gene-LDO49_RS36210;Name=LDO49_RS36210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36210;old_locus_tag=BCEP4_90015 NZ_CAJZAV010000301.1 Protein Homology CDS 12641 13384 . + 0 ID=cds-WP_224052879.1;Parent=gene-LDO49_RS36210;Dbxref=GenBank:WP_224052879.1;Name=WP_224052879.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759577.1;locus_tag=LDO49_RS36210;product=SDR family oxidoreductase;protein_id=WP_224052879.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 13465 14502 . + . ID=gene-LDO49_RS36215;Name=LDO49_RS36215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36215;old_locus_tag=BCEP4_90014 NZ_CAJZAV010000301.1 Protein Homology CDS 13465 14502 . + 0 ID=cds-WP_224052880.1;Parent=gene-LDO49_RS36215;Dbxref=GenBank:WP_224052880.1;Name=WP_224052880.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660684.1;locus_tag=LDO49_RS36215;product=LysR family transcriptional regulator;protein_id=WP_224052880.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 14682 15986 . - . ID=gene-LDO49_RS36220;Name=LDO49_RS36220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36220;old_locus_tag=BCEP4_90016 NZ_CAJZAV010000301.1 Protein Homology CDS 14682 15986 . - 0 ID=cds-WP_224052881.1;Parent=gene-LDO49_RS36220;Dbxref=GenBank:WP_224052881.1;Name=WP_224052881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489158.1;locus_tag=LDO49_RS36220;product=HipA domain-containing protein;protein_id=WP_224052881.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 15976 16260 . - . ID=gene-LDO49_RS36225;Name=LDO49_RS36225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36225;old_locus_tag=BCEP4_90017 NZ_CAJZAV010000301.1 Protein Homology CDS 15976 16260 . - 0 ID=cds-WP_021158233.1;Parent=gene-LDO49_RS36225;Dbxref=GenBank:WP_021158233.1;Name=WP_021158233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481273.1;locus_tag=LDO49_RS36225;product=helix-turn-helix domain-containing protein;protein_id=WP_021158233.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 16560 17789 . + . ID=gene-LDO49_RS36230;Name=LDO49_RS36230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36230;old_locus_tag=BCEP4_90018 NZ_CAJZAV010000301.1 GeneMarkS-2+ CDS 16560 17789 . + 0 ID=cds-WP_224052882.1;Parent=gene-LDO49_RS36230;Dbxref=GenBank:WP_224052882.1;Name=WP_224052882.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS36230;product=DKNYY domain-containing protein;protein_id=WP_224052882.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 18030 19247 . + . ID=gene-LDO49_RS36235;Name=LDO49_RS36235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36235;old_locus_tag=BCEP4_90020 NZ_CAJZAV010000301.1 Protein Homology CDS 18030 19247 . + 0 ID=cds-WP_059677936.1;Parent=gene-LDO49_RS36235;Dbxref=GenBank:WP_059677936.1;Name=WP_059677936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349769.1;locus_tag=LDO49_RS36235;product=acyl-CoA dehydrogenase family protein;protein_id=WP_059677936.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 19303 20490 . - . ID=gene-LDO49_RS36240;Name=LDO49_RS36240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36240;old_locus_tag=BCEP4_90021 NZ_CAJZAV010000301.1 Protein Homology CDS 19303 20490 . - 0 ID=cds-WP_224052883.1;Parent=gene-LDO49_RS36240;Dbxref=GenBank:WP_224052883.1;Name=WP_224052883.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493986.1;locus_tag=LDO49_RS36240;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_224052883.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 20790 21974 . - . ID=gene-LDO49_RS36245;Name=LDO49_RS36245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36245;old_locus_tag=BCEP4_90023 NZ_CAJZAV010000301.1 Protein Homology CDS 20790 21974 . - 0 ID=cds-WP_224052884.1;Parent=gene-LDO49_RS36245;Dbxref=GenBank:WP_224052884.1;Name=WP_224052884.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336737.1;locus_tag=LDO49_RS36245;product=porin;protein_id=WP_224052884.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 22462 22806 . + . ID=gene-LDO49_RS36250;Name=LDO49_RS36250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36250;old_locus_tag=BCEP4_90024 NZ_CAJZAV010000301.1 Protein Homology CDS 22462 22806 . + 0 ID=cds-WP_021158240.1;Parent=gene-LDO49_RS36250;Dbxref=GenBank:WP_021158240.1;Name=WP_021158240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545446.1;locus_tag=LDO49_RS36250;product=DUF3088 domain-containing protein;protein_id=WP_021158240.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 22859 23857 . + . ID=gene-LDO49_RS36255;Name=LDO49_RS36255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36255;old_locus_tag=BCEP4_90025 NZ_CAJZAV010000301.1 Protein Homology CDS 22859 23857 . + 0 ID=cds-WP_175850134.1;Parent=gene-LDO49_RS36255;Dbxref=GenBank:WP_175850134.1;Name=WP_175850134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758215.1;locus_tag=LDO49_RS36255;product=ABC transporter substrate-binding protein;protein_id=WP_175850134.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 23941 24261 . - . ID=gene-LDO49_RS36260;Name=LDO49_RS36260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36260;old_locus_tag=BCEP4_90026 NZ_CAJZAV010000301.1 Protein Homology CDS 23941 24261 . - 0 ID=cds-WP_027792604.1;Parent=gene-LDO49_RS36260;Dbxref=GenBank:WP_027792604.1;Name=WP_027792604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349774.1;locus_tag=LDO49_RS36260;product=hypothetical protein;protein_id=WP_027792604.1;transl_table=11 NZ_CAJZAV010000301.1 RefSeq gene 24669 25943 . + . ID=gene-LDO49_RS36265;Name=LDO49_RS36265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36265;old_locus_tag=BCEP4_90028 NZ_CAJZAV010000301.1 Protein Homology CDS 24669 25943 . + 0 ID=cds-WP_048027020.1;Parent=gene-LDO49_RS36265;Dbxref=GenBank:WP_048027020.1;Name=WP_048027020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367281.1;locus_tag=LDO49_RS36265;product=hypothetical protein;protein_id=WP_048027020.1;transl_table=11 ##sequence-region NZ_CAJZAV010000302.1 1 12200 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000302.1 RefSeq region 1 12200 . + . ID=NZ_CAJZAV010000302.1:1..12200;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_90 NZ_CAJZAV010000302.1 RefSeq gene 1 561 . + . ID=gene-LDO49_RS36270;Name=LDO49_RS36270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36270;old_locus_tag=BCEP4_900001;partial=true;start_range=.,1 NZ_CAJZAV010000302.1 Protein Homology CDS 1 561 . + 0 ID=cds-WP_224052885.1;Parent=gene-LDO49_RS36270;Dbxref=GenBank:WP_224052885.1;Name=WP_224052885.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495491.1;locus_tag=LDO49_RS36270;partial=true;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_224052885.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000302.1 RefSeq gene 586 1887 . + . ID=gene-LDO49_RS36275;Name=LDO49_RS36275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36275;old_locus_tag=BCEP4_900002 NZ_CAJZAV010000302.1 Protein Homology CDS 586 1887 . + 0 ID=cds-WP_059863546.1;Parent=gene-LDO49_RS36275;Dbxref=GenBank:WP_059863546.1;Name=WP_059863546.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477579.1;locus_tag=LDO49_RS36275;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_059863546.1;transl_table=11 NZ_CAJZAV010000302.1 RefSeq gene 2034 2708 . - . ID=gene-LDO49_RS36280;Name=LDO49_RS36280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36280;old_locus_tag=BCEP4_900003 NZ_CAJZAV010000302.1 Protein Homology CDS 2034 2708 . - 0 ID=cds-WP_059496525.1;Parent=gene-LDO49_RS36280;Dbxref=GenBank:WP_059496525.1;Name=WP_059496525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546399.1;locus_tag=LDO49_RS36280;product=DUF799 domain-containing protein;protein_id=WP_059496525.1;transl_table=11 NZ_CAJZAV010000302.1 RefSeq gene 2719 3150 . - . ID=gene-LDO49_RS36285;Name=LDO49_RS36285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36285;old_locus_tag=BCEP4_900004 NZ_CAJZAV010000302.1 Protein Homology CDS 2719 3150 . - 0 ID=cds-WP_048026633.1;Parent=gene-LDO49_RS36285;Dbxref=GenBank:WP_048026633.1;Name=WP_048026633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329380.1;locus_tag=LDO49_RS36285;product=DUF4810 domain-containing protein;protein_id=WP_048026633.1;transl_table=11 NZ_CAJZAV010000302.1 RefSeq gene 3207 3878 . - . ID=gene-LDO49_RS36290;Name=LDO49_RS36290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36290;old_locus_tag=BCEP4_900005 NZ_CAJZAV010000302.1 Protein Homology CDS 3207 3878 . - 0 ID=cds-WP_182670311.1;Parent=gene-LDO49_RS36290;Dbxref=GenBank:WP_182670311.1;Name=WP_182670311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484289.1;locus_tag=LDO49_RS36290;product=CsgG/HfaB family protein;protein_id=WP_182670311.1;transl_table=11 NZ_CAJZAV010000302.1 RefSeq gene 4528 5886 . - . ID=gene-LDO49_RS36295;Name=gor;gbkey=Gene;gene=gor;gene_biotype=protein_coding;locus_tag=LDO49_RS36295;old_locus_tag=BCEP4_900007 NZ_CAJZAV010000302.1 Protein Homology CDS 4528 5886 . - 0 ID=cds-WP_224052886.1;Parent=gene-LDO49_RS36295;Dbxref=GenBank:WP_224052886.1;Name=WP_224052886.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gor;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495494.1;locus_tag=LDO49_RS36295;product=glutathione-disulfide reductase;protein_id=WP_224052886.1;transl_table=11 NZ_CAJZAV010000302.1 RefSeq gene 6131 6355 . - . ID=gene-LDO49_RS36300;Name=LDO49_RS36300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36300;old_locus_tag=BCEP4_900008 NZ_CAJZAV010000302.1 Protein Homology CDS 6131 6355 . - 0 ID=cds-WP_027788932.1;Parent=gene-LDO49_RS36300;Dbxref=GenBank:WP_027788932.1;Name=WP_027788932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753937.1;locus_tag=LDO49_RS36300;product=hypothetical protein;protein_id=WP_027788932.1;transl_table=11 NZ_CAJZAV010000302.1 RefSeq gene 6732 7853 . - . ID=gene-LDO49_RS36305;Name=LDO49_RS36305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36305;old_locus_tag=BCEP4_900009 NZ_CAJZAV010000302.1 Protein Homology CDS 6732 7853 . - 0 ID=cds-WP_011353454.1;Parent=gene-LDO49_RS36305;Dbxref=GenBank:WP_011353454.1;Name=WP_011353454.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492356.1;locus_tag=LDO49_RS36305;product=porin;protein_id=WP_011353454.1;transl_table=11 NZ_CAJZAV010000302.1 RefSeq gene 8170 8871 . - . ID=gene-LDO49_RS36310;Name=LDO49_RS36310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36310;old_locus_tag=BCEP4_900010 NZ_CAJZAV010000302.1 Protein Homology CDS 8170 8871 . - 0 ID=cds-WP_059496526.1;Parent=gene-LDO49_RS36310;Dbxref=GenBank:WP_059496526.1;Name=WP_059496526.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353455.1;locus_tag=LDO49_RS36310;product=YoaK family protein;protein_id=WP_059496526.1;transl_table=11 NZ_CAJZAV010000302.1 RefSeq gene 8929 9456 . - . ID=gene-LDO49_RS36315;Name=LDO49_RS36315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36315;old_locus_tag=BCEP4_900011 NZ_CAJZAV010000302.1 Protein Homology CDS 8929 9456 . - 0 ID=cds-WP_043184629.1;Parent=gene-LDO49_RS36315;Dbxref=GenBank:WP_043184629.1;Name=WP_043184629.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546406.1;locus_tag=LDO49_RS36315;product=chromate transporter;protein_id=WP_043184629.1;transl_table=11 NZ_CAJZAV010000302.1 RefSeq gene 9453 10091 . - . ID=gene-LDO49_RS36320;Name=LDO49_RS36320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36320;old_locus_tag=BCEP4_900012 NZ_CAJZAV010000302.1 Protein Homology CDS 9453 10091 . - 0 ID=cds-WP_059483898.1;Parent=gene-LDO49_RS36320;Dbxref=GenBank:WP_059483898.1;Name=WP_059483898.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353457.1;locus_tag=LDO49_RS36320;product=chromate transporter;protein_id=WP_059483898.1;transl_table=11 NZ_CAJZAV010000302.1 RefSeq gene 10188 11072 . + . ID=gene-LDO49_RS36325;Name=LDO49_RS36325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36325;old_locus_tag=BCEP4_900013 NZ_CAJZAV010000302.1 Protein Homology CDS 10188 11072 . + 0 ID=cds-WP_021163478.1;Parent=gene-LDO49_RS36325;Dbxref=GenBank:WP_021163478.1;Name=WP_021163478.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658134.1;locus_tag=LDO49_RS36325;product=transcriptional regulator GcvA;protein_id=WP_021163478.1;transl_table=11 NZ_CAJZAV010000302.1 RefSeq gene 11112 12200 . - . ID=gene-LDO49_RS36330;Name=LDO49_RS36330;end_range=12200,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36330;old_locus_tag=BCEP4_900014;partial=true NZ_CAJZAV010000302.1 Protein Homology CDS 11112 12200 . - 0 ID=cds-WP_224052887.1;Parent=gene-LDO49_RS36330;Dbxref=GenBank:WP_224052887.1;Name=WP_224052887.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=12200,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004542894.1;locus_tag=LDO49_RS36330;partial=true;product=solute carrier family 23 protein;protein_id=WP_224052887.1;transl_table=11 ##sequence-region NZ_CAJZAV010000303.1 1 48367 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000303.1 RefSeq region 1 48367 . + . ID=NZ_CAJZAV010000303.1:1..48367;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_91 NZ_CAJZAV010000303.1 RefSeq gene 1 713 . + . ID=gene-LDO49_RS36335;Name=LDO49_RS36335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36335;old_locus_tag=BCEP4_910001;partial=true;start_range=.,1 NZ_CAJZAV010000303.1 Protein Homology CDS 1 713 . + 2 ID=cds-WP_224052888.1;Parent=gene-LDO49_RS36335;Dbxref=GenBank:WP_224052888.1;Name=WP_224052888.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898396.1;locus_tag=LDO49_RS36335;partial=true;product=aminotransferase-like domain-containing protein;protein_id=WP_224052888.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 811 3042 . + . ID=gene-LDO49_RS36340;Name=LDO49_RS36340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36340;old_locus_tag=BCEP4_910002 NZ_CAJZAV010000303.1 Protein Homology CDS 811 3042 . + 0 ID=cds-WP_060049214.1;Parent=gene-LDO49_RS36340;Dbxref=GenBank:WP_060049214.1;Name=WP_060049214.1;Ontology_term=GO:0006508,GO:0009252,GO:0008658,GO:0008955,GO:0009002;gbkey=CDS;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753731.1;locus_tag=LDO49_RS36340;product=penicillin-binding protein 1A;protein_id=WP_060049214.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 3076 4986 . - . ID=gene-LDO49_RS36345;Name=LDO49_RS36345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36345;old_locus_tag=BCEP4_910003 NZ_CAJZAV010000303.1 Protein Homology CDS 3076 4986 . - 0 ID=cds-WP_060073243.1;Parent=gene-LDO49_RS36345;Dbxref=GenBank:WP_060073243.1;Name=WP_060073243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354004.1;locus_tag=LDO49_RS36345;product=WG repeat-containing protein;protein_id=WP_060073243.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 5055 5666 . - . ID=gene-LDO49_RS36350;Name=LDO49_RS36350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36350;old_locus_tag=BCEP4_910004 NZ_CAJZAV010000303.1 GeneMarkS-2+ CDS 5055 5666 . - 0 ID=cds-WP_224052889.1;Parent=gene-LDO49_RS36350;Dbxref=GenBank:WP_224052889.1;Name=WP_224052889.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS36350;product=hypothetical protein;protein_id=WP_224052889.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 5787 6233 . + . ID=gene-LDO49_RS36355;Name=LDO49_RS36355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36355;old_locus_tag=BCEP4_910005 NZ_CAJZAV010000303.1 Protein Homology CDS 5787 6233 . + 0 ID=cds-WP_060073247.1;Parent=gene-LDO49_RS36355;Dbxref=GenBank:WP_060073247.1;Name=WP_060073247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898394.1;locus_tag=LDO49_RS36355;product=nuclear transport factor 2 family protein;protein_id=WP_060073247.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 6267 7367 . - . ID=gene-LDO49_RS36360;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=LDO49_RS36360;old_locus_tag=BCEP4_910006 NZ_CAJZAV010000303.1 Protein Homology CDS 6267 7367 . - 0 ID=cds-WP_060073249.1;Parent=gene-LDO49_RS36360;Dbxref=GenBank:WP_060073249.1;Name=WP_060073249.1;Ontology_term=GO:0043101,GO:0004000,GO:0019239;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA,deaminase activity|0019239||IEA;go_process=purine-containing compound salvage|0043101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491124.1;locus_tag=LDO49_RS36360;product=adenosine deaminase;protein_id=WP_060073249.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 7414 8763 . - . ID=gene-LDO49_RS36365;Name=LDO49_RS36365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36365;old_locus_tag=BCEP4_910007 NZ_CAJZAV010000303.1 Protein Homology CDS 7414 8763 . - 0 ID=cds-WP_060073251.1;Parent=gene-LDO49_RS36365;Dbxref=GenBank:WP_060073251.1;Name=WP_060073251.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339414.1;locus_tag=LDO49_RS36365;product=NCS2 family permease;protein_id=WP_060073251.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 8858 9769 . + . ID=gene-LDO49_RS36370;Name=LDO49_RS36370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36370;old_locus_tag=BCEP4_910008 NZ_CAJZAV010000303.1 Protein Homology CDS 8858 9769 . + 0 ID=cds-WP_027790547.1;Parent=gene-LDO49_RS36370;Dbxref=GenBank:WP_027790547.1;Name=WP_027790547.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366841.1;locus_tag=LDO49_RS36370;product=LysR family transcriptional regulator;protein_id=WP_027790547.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 9818 10870 . - . ID=gene-LDO49_RS36375;Name=LDO49_RS36375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36375;old_locus_tag=BCEP4_910009 NZ_CAJZAV010000303.1 Protein Homology CDS 9818 10870 . - 0 ID=cds-WP_060073254.1;Parent=gene-LDO49_RS36375;Dbxref=GenBank:WP_060073254.1;Name=WP_060073254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480526.1;locus_tag=LDO49_RS36375;product=nucleoside hydrolase;protein_id=WP_060073254.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 10881 11993 . - . ID=gene-LDO49_RS36380;Name=LDO49_RS36380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36380;old_locus_tag=BCEP4_910010 NZ_CAJZAV010000303.1 Protein Homology CDS 10881 11993 . - 0 ID=cds-WP_060073255.1;Parent=gene-LDO49_RS36380;Dbxref=GenBank:WP_060073255.1;Name=WP_060073255.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546929.1;locus_tag=LDO49_RS36380;product=porin;protein_id=WP_060073255.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 12163 13491 . - . ID=gene-LDO49_RS36385;Name=LDO49_RS36385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36385 NZ_CAJZAV010000303.1 Protein Homology CDS 12163 13491 . - 0 ID=cds-WP_060073258.1;Parent=gene-LDO49_RS36385;Dbxref=GenBank:WP_060073258.1;Name=WP_060073258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480524.1;locus_tag=LDO49_RS36385;product=hypothetical protein;protein_id=WP_060073258.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 13889 15307 . - . ID=gene-LDO49_RS36390;Name=LDO49_RS36390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36390;old_locus_tag=BCEP4_910012 NZ_CAJZAV010000303.1 Protein Homology CDS 13889 15307 . - 0 ID=cds-WP_060073259.1;Parent=gene-LDO49_RS36390;Dbxref=GenBank:WP_060073259.1;Name=WP_060073259.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353995.1;locus_tag=LDO49_RS36390;product=MFS transporter;protein_id=WP_060073259.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 15762 18218 . + . ID=gene-LDO49_RS36395;Name=LDO49_RS36395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36395;old_locus_tag=BCEP4_910014 NZ_CAJZAV010000303.1 Protein Homology CDS 15762 18218 . + 0 ID=cds-WP_021161162.1;Parent=gene-LDO49_RS36395;Dbxref=GenBank:WP_021161162.1;Name=WP_021161162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353994.1;locus_tag=LDO49_RS36395;product=DUF3772 domain-containing protein;protein_id=WP_021161162.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 18340 19851 . - . ID=gene-LDO49_RS36400;Name=amaB;gbkey=Gene;gene=amaB;gene_biotype=protein_coding;gene_synonym=amaA;locus_tag=LDO49_RS36400;old_locus_tag=BCEP4_910015 NZ_CAJZAV010000303.1 Protein Homology CDS 18340 19851 . - 0 ID=cds-WP_021161161.1;Parent=gene-LDO49_RS36400;Dbxref=GenBank:WP_021161161.1;Name=WP_021161161.1;gbkey=CDS;gene=amaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880871.1;locus_tag=LDO49_RS36400;product=L-piperidine-6-carboxylate dehydrogenase;protein_id=WP_021161161.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 20485 22065 . + . ID=gene-LDO49_RS36405;Name=LDO49_RS36405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36405;old_locus_tag=BCEP4_910017 NZ_CAJZAV010000303.1 Protein Homology CDS 20485 22065 . + 0 ID=cds-WP_060073261.1;Parent=gene-LDO49_RS36405;Dbxref=GenBank:WP_060073261.1;Name=WP_060073261.1;Ontology_term=GO:0006865;gbkey=CDS;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898383.1;locus_tag=LDO49_RS36405;product=amino acid permease;protein_id=WP_060073261.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 22229 23497 . + . ID=gene-LDO49_RS36410;Name=LDO49_RS36410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36410;old_locus_tag=BCEP4_910018 NZ_CAJZAV010000303.1 Protein Homology CDS 22229 23497 . + 0 ID=cds-WP_060073263.1;Parent=gene-LDO49_RS36410;Dbxref=GenBank:WP_060073263.1;Name=WP_060073263.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898382.1;locus_tag=LDO49_RS36410;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_060073263.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 23611 24285 . + . ID=gene-LDO49_RS36415;Name=LDO49_RS36415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36415;old_locus_tag=BCEP4_910019 NZ_CAJZAV010000303.1 Protein Homology CDS 23611 24285 . + 0 ID=cds-WP_011353990.1;Parent=gene-LDO49_RS36415;Dbxref=GenBank:WP_011353990.1;Name=WP_011353990.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366853.1;locus_tag=LDO49_RS36415;product=TetR family transcriptional regulator;protein_id=WP_011353990.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 24361 26157 . - . ID=gene-LDO49_RS36420;Name=LDO49_RS36420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36420;old_locus_tag=BCEP4_910020 NZ_CAJZAV010000303.1 Protein Homology CDS 24361 26157 . - 0 ID=cds-WP_060073265.1;Parent=gene-LDO49_RS36420;Dbxref=GenBank:WP_060073265.1;Name=WP_060073265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758666.1;locus_tag=LDO49_RS36420;product=phospholipase D-like domain-containing protein;protein_id=WP_060073265.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 26263 27021 . - . ID=gene-LDO49_RS36425;Name=LDO49_RS36425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36425;old_locus_tag=BCEP4_910021 NZ_CAJZAV010000303.1 Protein Homology CDS 26263 27021 . - 0 ID=cds-WP_021161157.1;Parent=gene-LDO49_RS36425;Dbxref=GenBank:WP_021161157.1;Name=WP_021161157.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546920.1;locus_tag=LDO49_RS36425;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_021161157.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 27230 27415 . + . ID=gene-LDO49_RS36430;Name=LDO49_RS36430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36430;old_locus_tag=BCEP4_910022 NZ_CAJZAV010000303.1 Protein Homology CDS 27230 27415 . + 0 ID=cds-WP_021161156.1;Parent=gene-LDO49_RS36430;Dbxref=GenBank:WP_021161156.1;Name=WP_021161156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853420.1;locus_tag=LDO49_RS36430;product=hypothetical protein;protein_id=WP_021161156.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 27630 28373 . + . ID=gene-LDO49_RS36435;Name=LDO49_RS36435;end_range=28373,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36435;old_locus_tag=BCEP4_910023;partial=true NZ_CAJZAV010000303.1 Protein Homology CDS 27630 28373 . + 0 ID=cds-WP_443798029.1;Parent=gene-LDO49_RS36435;Dbxref=GenBank:WP_443798029.1;Name=WP_443798029.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;end_range=28373,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353987.1;locus_tag=LDO49_RS36435;partial=true;product=DMT family transporter;protein_id=WP_443798029.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq pseudogene 28384 28528 . + . ID=gene-LDO49_RS38450;Name=LDO49_RS38450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS38450;partial=true;pseudo=true;start_range=.,28384 NZ_CAJZAV010000303.1 Protein Homology CDS 28384 28528 . + 1 ID=cds-LDO49_RS38450;Parent=gene-LDO49_RS38450;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603355.1;locus_tag=LDO49_RS38450;partial=true;product=EamA/RhaT family transporter;pseudo=true;start_range=.,28384;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 28791 29639 . + . ID=gene-LDO49_RS36440;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=LDO49_RS36440;old_locus_tag=BCEP4_910025 NZ_CAJZAV010000303.1 Protein Homology CDS 28791 29639 . + 0 ID=cds-WP_021161153.1;Parent=gene-LDO49_RS36440;Dbxref=GenBank:WP_021161153.1;Name=WP_021161153.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366857.1;locus_tag=LDO49_RS36440;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_021161153.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 29774 31450 . - . ID=gene-LDO49_RS36445;Name=LDO49_RS36445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36445;old_locus_tag=BCEP4_910026 NZ_CAJZAV010000303.1 Protein Homology CDS 29774 31450 . - 0 ID=cds-WP_060073269.1;Parent=gene-LDO49_RS36445;Dbxref=GenBank:WP_060073269.1;Name=WP_060073269.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353985.1;locus_tag=LDO49_RS36445;product=S10 family peptidase;protein_id=WP_060073269.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 31526 33130 . - . ID=gene-LDO49_RS36450;Name=LDO49_RS36450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36450;old_locus_tag=BCEP4_910029 NZ_CAJZAV010000303.1 Protein Homology CDS 31526 33130 . - 0 ID=cds-WP_059586822.1;Parent=gene-LDO49_RS36450;Dbxref=GenBank:WP_059586822.1;Name=WP_059586822.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339395.1;locus_tag=LDO49_RS36450;product=S53 family peptidase;protein_id=WP_059586822.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 33380 34006 . - . ID=gene-LDO49_RS36455;Name=LDO49_RS36455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36455;old_locus_tag=BCEP4_910030 NZ_CAJZAV010000303.1 Protein Homology CDS 33380 34006 . - 0 ID=cds-WP_027790530.1;Parent=gene-LDO49_RS36455;Dbxref=GenBank:WP_027790530.1;Name=WP_027790530.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752375.1;locus_tag=LDO49_RS36455;product=LysE family translocator;protein_id=WP_027790530.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 34141 34605 . + . ID=gene-LDO49_RS36460;Name=LDO49_RS36460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36460;old_locus_tag=BCEP4_910031 NZ_CAJZAV010000303.1 Protein Homology CDS 34141 34605 . + 0 ID=cds-WP_011353982.1;Parent=gene-LDO49_RS36460;Dbxref=GenBank:WP_011353982.1;Name=WP_011353982.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188527.1;locus_tag=LDO49_RS36460;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_011353982.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 34732 35643 . - . ID=gene-LDO49_RS36465;Name=LDO49_RS36465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36465;old_locus_tag=BCEP4_910032 NZ_CAJZAV010000303.1 Protein Homology CDS 34732 35643 . - 0 ID=cds-WP_027790528.1;Parent=gene-LDO49_RS36465;Dbxref=GenBank:WP_027790528.1;Name=WP_027790528.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493564.1;locus_tag=LDO49_RS36465;product=LysR family transcriptional regulator;protein_id=WP_027790528.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 35783 36739 . + . ID=gene-LDO49_RS36470;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=LDO49_RS36470;old_locus_tag=BCEP4_910033 NZ_CAJZAV010000303.1 Protein Homology CDS 35783 36739 . + 0 ID=cds-WP_021161147.1;Parent=gene-LDO49_RS36470;Dbxref=GenBank:WP_021161147.1;Name=WP_021161147.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766488.1;locus_tag=LDO49_RS36470;product=agmatinase;protein_id=WP_021161147.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 36796 38121 . + . ID=gene-LDO49_RS36475;Name=LDO49_RS36475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36475;old_locus_tag=BCEP4_910034 NZ_CAJZAV010000303.1 Protein Homology CDS 36796 38121 . + 0 ID=cds-WP_059859714.1;Parent=gene-LDO49_RS36475;Dbxref=GenBank:WP_059859714.1;Name=WP_059859714.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353979.1;locus_tag=LDO49_RS36475;product=MFS transporter;protein_id=WP_059859714.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 38219 40513 . - . ID=gene-LDO49_RS36480;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=LDO49_RS36480;old_locus_tag=BCEP4_910035 NZ_CAJZAV010000303.1 Protein Homology CDS 38219 40513 . - 0 ID=cds-WP_060073271.1;Parent=gene-LDO49_RS36480;Dbxref=GenBank:WP_060073271.1;Name=WP_060073271.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353976.1;locus_tag=LDO49_RS36480;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_060073271.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 40639 41547 . + . ID=gene-LDO49_RS36485;Name=LDO49_RS36485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36485;old_locus_tag=BCEP4_910036 NZ_CAJZAV010000303.1 Protein Homology CDS 40639 41547 . + 0 ID=cds-WP_060073272.1;Parent=gene-LDO49_RS36485;Dbxref=GenBank:WP_060073272.1;Name=WP_060073272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758655.1;locus_tag=LDO49_RS36485;product=LysR family transcriptional regulator;protein_id=WP_060073272.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 41570 42292 . - . ID=gene-LDO49_RS36490;Name=LDO49_RS36490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36490;old_locus_tag=BCEP4_910037 NZ_CAJZAV010000303.1 Protein Homology CDS 41570 42292 . - 0 ID=cds-WP_060073275.1;Parent=gene-LDO49_RS36490;Dbxref=GenBank:WP_060073275.1;Name=WP_060073275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752368.1;locus_tag=LDO49_RS36490;product=CbtA family protein;protein_id=WP_060073275.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 42306 42515 . - . ID=gene-LDO49_RS36495;Name=LDO49_RS36495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36495;old_locus_tag=BCEP4_910038 NZ_CAJZAV010000303.1 Protein Homology CDS 42306 42515 . - 0 ID=cds-WP_006488502.1;Parent=gene-LDO49_RS36495;Dbxref=GenBank:WP_006488502.1;Name=WP_006488502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546908.1;locus_tag=LDO49_RS36495;product=CbtB domain-containing protein;protein_id=WP_006488502.1;transl_table=11 NZ_CAJZAV010000303.1 cmsearch riboswitch 42549 42690 . - . ID=id-NZ_CAJZAV010000303.1:42549..42690;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAV010000303.1 RefSeq gene 42736 43308 . + . ID=gene-LDO49_RS36500;Name=LDO49_RS36500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36500;old_locus_tag=BCEP4_910039 NZ_CAJZAV010000303.1 Protein Homology CDS 42736 43308 . + 0 ID=cds-WP_060073277.1;Parent=gene-LDO49_RS36500;Dbxref=GenBank:WP_060073277.1;Name=WP_060073277.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752366.1;locus_tag=LDO49_RS36500;product=histidine phosphatase family protein;protein_id=WP_060073277.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 43484 45076 . + . ID=gene-LDO49_RS36505;Name=LDO49_RS36505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36505;old_locus_tag=BCEP4_910041 NZ_CAJZAV010000303.1 Protein Homology CDS 43484 45076 . + 0 ID=cds-WP_021161141.1;Parent=gene-LDO49_RS36505;Dbxref=GenBank:WP_021161141.1;Name=WP_021161141.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488499.1;locus_tag=LDO49_RS36505;product=inorganic phosphate transporter;protein_id=WP_021161141.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 45444 46187 . + . ID=gene-LDO49_RS36510;Name=LDO49_RS36510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36510;old_locus_tag=BCEP4_910042 NZ_CAJZAV010000303.1 Protein Homology CDS 45444 46187 . + 0 ID=cds-WP_060054085.1;Parent=gene-LDO49_RS36510;Dbxref=GenBank:WP_060054085.1;Name=WP_060054085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758651.1;locus_tag=LDO49_RS36510;product=2OG-Fe(II) oxygenase;protein_id=WP_060054085.1;transl_table=11 NZ_CAJZAV010000303.1 RefSeq gene 46403 47827 . - . ID=gene-LDO49_RS36515;Name=LDO49_RS36515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36515;old_locus_tag=BCEP4_910043 NZ_CAJZAV010000303.1 Protein Homology CDS 46403 47827 . - 0 ID=cds-WP_060073279.1;Parent=gene-LDO49_RS36515;Dbxref=GenBank:WP_060073279.1;Name=WP_060073279.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366870.1;locus_tag=LDO49_RS36515;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_060073279.1;transl_table=11 ##sequence-region NZ_CAJZAV010000304.1 1 4937 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000304.1 RefSeq region 1 4937 . + . ID=NZ_CAJZAV010000304.1:1..4937;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_92 NZ_CAJZAV010000304.1 RefSeq gene 65 177 . - . ID=gene-LDO49_RS36520;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LDO49_RS36520;old_locus_tag=BCEP4_RRNA3 NZ_CAJZAV010000304.1 cmsearch rRNA 65 177 . - . ID=rna-LDO49_RS36520;Parent=gene-LDO49_RS36520;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO49_RS36520;product=5S ribosomal RNA NZ_CAJZAV010000304.1 cmsearch exon 65 177 . - . ID=exon-LDO49_RS36520-1;Parent=rna-LDO49_RS36520;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO49_RS36520;product=5S ribosomal RNA NZ_CAJZAV010000304.1 RefSeq gene 262 3142 . - . ID=gene-LDO49_RS36525;Name=LDO49_RS36525;gbkey=Gene;gene_biotype=rRNA;locus_tag=LDO49_RS36525;old_locus_tag=BCEP4_RRNA1 NZ_CAJZAV010000304.1 cmsearch rRNA 262 3142 . - . ID=rna-LDO49_RS36525;Parent=gene-LDO49_RS36525;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO49_RS36525;product=23S ribosomal RNA NZ_CAJZAV010000304.1 cmsearch exon 262 3142 . - . ID=exon-LDO49_RS36525-1;Parent=rna-LDO49_RS36525;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO49_RS36525;product=23S ribosomal RNA NZ_CAJZAV010000304.1 RefSeq gene 3214 4746 . - . ID=gene-LDO49_RS36530;Name=LDO49_RS36530;gbkey=Gene;gene_biotype=rRNA;locus_tag=LDO49_RS36530;old_locus_tag=BCEP4_RRNA2 NZ_CAJZAV010000304.1 cmsearch rRNA 3214 4746 . - . ID=rna-LDO49_RS36530;Parent=gene-LDO49_RS36530;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO49_RS36530;product=16S ribosomal RNA NZ_CAJZAV010000304.1 cmsearch exon 3214 4746 . - . ID=exon-LDO49_RS36530-1;Parent=rna-LDO49_RS36530;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO49_RS36530;product=16S ribosomal RNA ##sequence-region NZ_CAJZAV010000305.1 1 51766 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000305.1 RefSeq region 1 51766 . + . ID=NZ_CAJZAV010000305.1:1..51766;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_93 NZ_CAJZAV010000305.1 RefSeq gene 181 747 . + . ID=gene-LDO49_RS36535;Name=LDO49_RS36535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36535;old_locus_tag=BCEP4_930001 NZ_CAJZAV010000305.1 Protein Homology CDS 181 747 . + 0 ID=cds-WP_224052890.1;Parent=gene-LDO49_RS36535;Dbxref=GenBank:WP_224052890.1;Name=WP_224052890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890687.1;locus_tag=LDO49_RS36535;product=BPSL1445 family SYLF domain-containing lipoprotein;protein_id=WP_224052890.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 855 1919 . - . ID=gene-LDO49_RS36540;Name=LDO49_RS36540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36540;old_locus_tag=BCEP4_930002 NZ_CAJZAV010000305.1 Protein Homology CDS 855 1919 . - 0 ID=cds-WP_021162641.1;Parent=gene-LDO49_RS36540;Dbxref=GenBank:WP_021162641.1;Name=WP_021162641.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004552799.1;locus_tag=LDO49_RS36540;product=glycosyltransferase family 4 protein;protein_id=WP_021162641.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 2168 3343 . - . ID=gene-LDO49_RS36545;Name=LDO49_RS36545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36545;old_locus_tag=BCEP4_930003 NZ_CAJZAV010000305.1 Protein Homology CDS 2168 3343 . - 0 ID=cds-WP_021162642.1;Parent=gene-LDO49_RS36545;Dbxref=GenBank:WP_021162642.1;Name=WP_021162642.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026187.1;locus_tag=LDO49_RS36545;product=AAA family ATPase;protein_id=WP_021162642.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 3366 4538 . - . ID=gene-LDO49_RS36550;Name=LDO49_RS36550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36550;old_locus_tag=BCEP4_930004 NZ_CAJZAV010000305.1 Protein Homology CDS 3366 4538 . - 0 ID=cds-WP_059494204.1;Parent=gene-LDO49_RS36550;Dbxref=GenBank:WP_059494204.1;Name=WP_059494204.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755342.1;locus_tag=LDO49_RS36550;product=mechanosensitive ion channel family protein;protein_id=WP_059494204.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 4629 4985 . - . ID=gene-LDO49_RS36555;Name=LDO49_RS36555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36555;old_locus_tag=BCEP4_930005 NZ_CAJZAV010000305.1 Protein Homology CDS 4629 4985 . - 0 ID=cds-WP_006485939.1;Parent=gene-LDO49_RS36555;Dbxref=GenBank:WP_006485939.1;Name=WP_006485939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402276.1;locus_tag=LDO49_RS36555;product=Rap1a/Tai family immunity protein;protein_id=WP_006485939.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 5105 5815 . - . ID=gene-LDO49_RS36560;Name=LDO49_RS36560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36560;old_locus_tag=BCEP4_930006 NZ_CAJZAV010000305.1 Protein Homology CDS 5105 5815 . - 0 ID=cds-WP_021162644.1;Parent=gene-LDO49_RS36560;Dbxref=GenBank:WP_021162644.1;Name=WP_021162644.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885037.1;locus_tag=LDO49_RS36560;product=ankyrin repeat domain-containing protein;protein_id=WP_021162644.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 5859 6638 . - . ID=gene-LDO49_RS36565;Name=LDO49_RS36565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36565;old_locus_tag=BCEP4_930007 NZ_CAJZAV010000305.1 Protein Homology CDS 5859 6638 . - 0 ID=cds-WP_021162645.1;Parent=gene-LDO49_RS36565;Dbxref=GenBank:WP_021162645.1;Name=WP_021162645.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485949.1;locus_tag=LDO49_RS36565;product=TatD family hydrolase;protein_id=WP_021162645.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 6780 7808 . - . ID=gene-LDO49_RS36570;Name=LDO49_RS36570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36570;old_locus_tag=BCEP4_930008 NZ_CAJZAV010000305.1 Protein Homology CDS 6780 7808 . - 0 ID=cds-WP_021162646.1;Parent=gene-LDO49_RS36570;Dbxref=GenBank:WP_021162646.1;Name=WP_021162646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352331.1;locus_tag=LDO49_RS36570;product=DNA polymerase III subunit delta';protein_id=WP_021162646.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 7828 8448 . - . ID=gene-LDO49_RS36575;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=LDO49_RS36575;old_locus_tag=BCEP4_930009 NZ_CAJZAV010000305.1 Protein Homology CDS 7828 8448 . - 0 ID=cds-WP_021162647.1;Parent=gene-LDO49_RS36575;Dbxref=GenBank:WP_021162647.1;Name=WP_021162647.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521281.1;locus_tag=LDO49_RS36575;product=dTMP kinase;protein_id=WP_021162647.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 8448 9467 . - . ID=gene-LDO49_RS36580;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=LDO49_RS36580;old_locus_tag=BCEP4_930010 NZ_CAJZAV010000305.1 Protein Homology CDS 8448 9467 . - 0 ID=cds-WP_224052891.1;Parent=gene-LDO49_RS36580;Dbxref=GenBank:WP_224052891.1;Name=WP_224052891.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601776.1;locus_tag=LDO49_RS36580;product=endolytic transglycosylase MltG;protein_id=WP_224052891.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 9545 10579 . + . ID=gene-LDO49_RS36585;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=LDO49_RS36585;old_locus_tag=BCEP4_930011 NZ_CAJZAV010000305.1 Protein Homology CDS 9545 10579 . + 0 ID=cds-WP_224052892.1;Parent=gene-LDO49_RS36585;Dbxref=GenBank:WP_224052892.1;Name=WP_224052892.1;Ontology_term=GO:0006400,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004535832.1;locus_tag=LDO49_RS36585;product=CAF17-like 4Fe-4S cluster assembly/insertion protein YgfZ;protein_id=WP_224052892.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 10656 11501 . + . ID=gene-LDO49_RS36590;Name=LDO49_RS36590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36590;old_locus_tag=BCEP4_930012 NZ_CAJZAV010000305.1 Protein Homology CDS 10656 11501 . + 0 ID=cds-WP_021162650.1;Parent=gene-LDO49_RS36590;Dbxref=GenBank:WP_021162650.1;Name=WP_021162650.1;Ontology_term=GO:0007030,GO:0009306;gbkey=CDS;go_process=Golgi organization|0007030||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896831.1;locus_tag=LDO49_RS36590;product=NRDE family protein;protein_id=WP_021162650.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 11522 11962 . - . ID=gene-LDO49_RS36595;Name=LDO49_RS36595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36595;old_locus_tag=BCEP4_930013 NZ_CAJZAV010000305.1 Protein Homology CDS 11522 11962 . - 0 ID=cds-WP_021162651.1;Parent=gene-LDO49_RS36595;Dbxref=GenBank:WP_021162651.1;Name=WP_021162651.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411891.1;locus_tag=LDO49_RS36595;product=GNAT family N-acetyltransferase;protein_id=WP_021162651.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 12010 12969 . - . ID=gene-LDO49_RS36600;Name=LDO49_RS36600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36600;old_locus_tag=BCEP4_930014 NZ_CAJZAV010000305.1 Protein Homology CDS 12010 12969 . - 0 ID=cds-WP_059494198.1;Parent=gene-LDO49_RS36600;Dbxref=GenBank:WP_059494198.1;Name=WP_059494198.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414493.1;locus_tag=LDO49_RS36600;product=alpha/beta hydrolase;protein_id=WP_059494198.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 13160 13639 . - . ID=gene-LDO49_RS36605;Name=LDO49_RS36605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36605;old_locus_tag=BCEP4_930015 NZ_CAJZAV010000305.1 Protein Homology CDS 13160 13639 . - 0 ID=cds-WP_011352338.1;Parent=gene-LDO49_RS36605;Dbxref=GenBank:WP_011352338.1;Name=WP_011352338.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193935.1;locus_tag=LDO49_RS36605;product=PaaI family thioesterase;protein_id=WP_011352338.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 13636 13950 . - . ID=gene-LDO49_RS36610;Name=LDO49_RS36610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36610;old_locus_tag=BCEP4_930016 NZ_CAJZAV010000305.1 Protein Homology CDS 13636 13950 . - 0 ID=cds-WP_027787175.1;Parent=gene-LDO49_RS36610;Dbxref=GenBank:WP_027787175.1;Name=WP_027787175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192097.1;locus_tag=LDO49_RS36610;product=Dabb family protein;protein_id=WP_027787175.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 14823 16964 . + . ID=gene-LDO49_RS36615;Name=LDO49_RS36615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36615;old_locus_tag=BCEP4_930018 NZ_CAJZAV010000305.1 Protein Homology CDS 14823 16964 . + 0 ID=cds-WP_224052893.1;Parent=gene-LDO49_RS36615;Dbxref=GenBank:WP_224052893.1;Name=WP_224052893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402262.1;locus_tag=LDO49_RS36615;product=hypothetical protein;protein_id=WP_224052893.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 17111 18511 . - . ID=gene-LDO49_RS36620;Name=LDO49_RS36620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36620;old_locus_tag=BCEP4_930019 NZ_CAJZAV010000305.1 Protein Homology CDS 17111 18511 . - 0 ID=cds-WP_021163392.1;Parent=gene-LDO49_RS36620;Dbxref=GenBank:WP_021163392.1;Name=WP_021163392.1;Ontology_term=GO:0005525,GO:0046872,GO:0052621,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=GTP binding|0005525||IEA,metal ion binding|0046872||IEA,diguanylate cyclase activity|0052621||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328686.1;locus_tag=LDO49_RS36620;product=GGDEF domain-containing protein;protein_id=WP_021163392.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 18773 19951 . - . ID=gene-LDO49_RS36625;Name=LDO49_RS36625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36625;old_locus_tag=BCEP4_930020 NZ_CAJZAV010000305.1 Protein Homology CDS 18773 19951 . - 0 ID=cds-WP_027787172.1;Parent=gene-LDO49_RS36625;Dbxref=GenBank:WP_027787172.1;Name=WP_027787172.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890652.1;locus_tag=LDO49_RS36625;product=acetyl-CoA C-acyltransferase;protein_id=WP_027787172.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 20003 20635 . - . ID=gene-LDO49_RS36630;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=LDO49_RS36630;old_locus_tag=BCEP4_930021 NZ_CAJZAV010000305.1 Protein Homology CDS 20003 20635 . - 0 ID=cds-WP_059708044.1;Parent=gene-LDO49_RS36630;Dbxref=GenBank:WP_059708044.1;Name=WP_059708044.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328688.1;locus_tag=LDO49_RS36630;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_059708044.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 20676 22760 . - . ID=gene-LDO49_RS36635;Name=LDO49_RS36635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36635;old_locus_tag=BCEP4_930022 NZ_CAJZAV010000305.1 Protein Homology CDS 20676 22760 . - 0 ID=cds-WP_224052894.1;Parent=gene-LDO49_RS36635;Dbxref=GenBank:WP_224052894.1;Name=WP_224052894.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483901.1;locus_tag=LDO49_RS36635;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;protein_id=WP_224052894.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 22962 24605 . - . ID=gene-LDO49_RS36640;Name=LDO49_RS36640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36640;old_locus_tag=BCEP4_930023 NZ_CAJZAV010000305.1 Protein Homology CDS 22962 24605 . - 0 ID=cds-WP_059708046.1;Parent=gene-LDO49_RS36640;Dbxref=GenBank:WP_059708046.1;Name=WP_059708046.1;Ontology_term=GO:0016874;gbkey=CDS;go_function=ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352347.1;locus_tag=LDO49_RS36640;product=3-(methylthio)propionyl-CoA ligase;protein_id=WP_059708046.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 24757 26325 . + . ID=gene-LDO49_RS36645;Name=LDO49_RS36645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36645;old_locus_tag=BCEP4_930024 NZ_CAJZAV010000305.1 Protein Homology CDS 24757 26325 . + 0 ID=cds-WP_059494190.1;Parent=gene-LDO49_RS36645;Dbxref=GenBank:WP_059494190.1;Name=WP_059494190.1;Ontology_term=GO:0000287,GO:0005524,GO:0070733;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657149.1;locus_tag=LDO49_RS36645;product=protein adenylyltransferase SelO;protein_id=WP_059494190.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 26370 26801 . + . ID=gene-LDO49_RS36650;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=LDO49_RS36650;old_locus_tag=BCEP4_930025 NZ_CAJZAV010000305.1 Protein Homology CDS 26370 26801 . + 0 ID=cds-WP_021163396.1;Parent=gene-LDO49_RS36650;Dbxref=GenBank:WP_021163396.1;Name=WP_021163396.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761174.1;locus_tag=LDO49_RS36650;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_021163396.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 26925 27455 . + . ID=gene-LDO49_RS36655;Name=LDO49_RS36655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36655;old_locus_tag=BCEP4_930026 NZ_CAJZAV010000305.1 Protein Homology CDS 26925 27455 . + 0 ID=cds-WP_011352350.1;Parent=gene-LDO49_RS36655;Dbxref=GenBank:WP_011352350.1;Name=WP_011352350.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904993.1;locus_tag=LDO49_RS36655;product=septation protein A;protein_id=WP_011352350.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 27457 27765 . + . ID=gene-LDO49_RS36660;Name=LDO49_RS36660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36660;old_locus_tag=BCEP4_930027 NZ_CAJZAV010000305.1 Protein Homology CDS 27457 27765 . + 0 ID=cds-WP_021163397.1;Parent=gene-LDO49_RS36660;Dbxref=GenBank:WP_021163397.1;Name=WP_021163397.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657151.1;locus_tag=LDO49_RS36660;product=BolA family protein;protein_id=WP_021163397.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 27784 28566 . + . ID=gene-LDO49_RS36665;Name=LDO49_RS36665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36665;old_locus_tag=BCEP4_930028 NZ_CAJZAV010000305.1 Protein Homology CDS 27784 28566 . + 0 ID=cds-WP_048021011.1;Parent=gene-LDO49_RS36665;Dbxref=GenBank:WP_048021011.1;Name=WP_048021011.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601097.1;locus_tag=LDO49_RS36665;product=peptidylprolyl isomerase;protein_id=WP_048021011.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 28733 29278 . - . ID=gene-LDO49_RS36670;Name=LDO49_RS36670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36670;old_locus_tag=BCEP4_930029 NZ_CAJZAV010000305.1 Protein Homology CDS 28733 29278 . - 0 ID=cds-WP_059490102.1;Parent=gene-LDO49_RS36670;Dbxref=GenBank:WP_059490102.1;Name=WP_059490102.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491849.1;locus_tag=LDO49_RS36670;product=GNAT family N-acetyltransferase;protein_id=WP_059490102.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 29284 33348 . - . ID=gene-LDO49_RS36675;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=LDO49_RS36675;old_locus_tag=BCEP4_930030 NZ_CAJZAV010000305.1 Protein Homology CDS 29284 33348 . - 0 ID=cds-WP_224052895.1;Parent=gene-LDO49_RS36675;Dbxref=GenBank:WP_224052895.1;Name=WP_224052895.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213195.1;locus_tag=LDO49_RS36675;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_224052895.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 33680 34981 . + . ID=gene-LDO49_RS36680;Name=LDO49_RS36680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36680;old_locus_tag=BCEP4_930031 NZ_CAJZAV010000305.1 Protein Homology CDS 33680 34981 . + 0 ID=cds-WP_048021007.1;Parent=gene-LDO49_RS36680;Dbxref=GenBank:WP_048021007.1;Name=WP_048021007.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527209.1;locus_tag=LDO49_RS36680;product=FAD-dependent oxidoreductase;protein_id=WP_048021007.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 35045 36589 . + . ID=gene-LDO49_RS36685;Name=LDO49_RS36685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36685;old_locus_tag=BCEP4_930032 NZ_CAJZAV010000305.1 Protein Homology CDS 35045 36589 . + 0 ID=cds-WP_224052896.1;Parent=gene-LDO49_RS36685;Dbxref=GenBank:WP_224052896.1;Name=WP_224052896.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492676.1;locus_tag=LDO49_RS36685;product=NAD(P)H-hydrate dehydratase;protein_id=WP_224052896.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 36701 38323 . + . ID=gene-LDO49_RS36690;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=LDO49_RS36690;old_locus_tag=BCEP4_930033 NZ_CAJZAV010000305.1 Protein Homology CDS 36701 38323 . + 0 ID=cds-WP_224052897.1;Parent=gene-LDO49_RS36690;Dbxref=GenBank:WP_224052897.1;Name=WP_224052897.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332014.1;locus_tag=LDO49_RS36690;product=glucose-6-phosphate isomerase;protein_id=WP_224052897.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 38401 39114 . - . ID=gene-LDO49_RS36695;Name=LDO49_RS36695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36695;old_locus_tag=BCEP4_930034 NZ_CAJZAV010000305.1 Protein Homology CDS 38401 39114 . - 0 ID=cds-WP_021163968.1;Parent=gene-LDO49_RS36695;Dbxref=GenBank:WP_021163968.1;Name=WP_021163968.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549613.1;locus_tag=LDO49_RS36695;product=ABC transporter ATP-binding protein;protein_id=WP_021163968.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 39113 39787 . + . ID=gene-LDO49_RS36700;Name=LDO49_RS36700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36700;old_locus_tag=BCEP4_930035 NZ_CAJZAV010000305.1 Protein Homology CDS 39113 39787 . + 0 ID=cds-WP_059651663.1;Parent=gene-LDO49_RS36700;Dbxref=GenBank:WP_059651663.1;Name=WP_059651663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489343.1;locus_tag=LDO49_RS36700;product=arylesterase;protein_id=WP_059651663.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 39860 41794 . - . ID=gene-LDO49_RS36705;Name=LDO49_RS36705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36705;old_locus_tag=BCEP4_930036 NZ_CAJZAV010000305.1 Protein Homology CDS 39860 41794 . - 0 ID=cds-WP_059553259.1;Parent=gene-LDO49_RS36705;Dbxref=GenBank:WP_059553259.1;Name=WP_059553259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554314.1;locus_tag=LDO49_RS36705;product=SurA N-terminal domain-containing protein;protein_id=WP_059553259.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 42397 43788 . + . ID=gene-LDO49_RS36710;Name=LDO49_RS36710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36710;old_locus_tag=BCEP4_930037 NZ_CAJZAV010000305.1 Protein Homology CDS 42397 43788 . + 0 ID=cds-WP_224052898.1;Parent=gene-LDO49_RS36710;Dbxref=GenBank:WP_224052898.1;Name=WP_224052898.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018561.6;locus_tag=LDO49_RS36710;product=DUF1254 domain-containing protein;protein_id=WP_224052898.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 44073 44149 . - . ID=gene-LDO49_RS36715;Name=LDO49_RS36715;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS36715;old_locus_tag=BCEP4_TRNA35 NZ_CAJZAV010000305.1 tRNAscan-SE tRNA 44073 44149 . - . ID=rna-LDO49_RS36715;Parent=gene-LDO49_RS36715;anticodon=(pos:complement(44113..44115));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS36715;product=tRNA-Asp NZ_CAJZAV010000305.1 tRNAscan-SE exon 44073 44149 . - . ID=exon-LDO49_RS36715-1;Parent=rna-LDO49_RS36715;anticodon=(pos:complement(44113..44115));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS36715;product=tRNA-Asp NZ_CAJZAV010000305.1 RefSeq gene 44173 44248 . - . ID=gene-LDO49_RS36720;Name=LDO49_RS36720;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO49_RS36720;old_locus_tag=BCEP4_TRNA34 NZ_CAJZAV010000305.1 tRNAscan-SE tRNA 44173 44248 . - . ID=rna-LDO49_RS36720;Parent=gene-LDO49_RS36720;anticodon=(pos:complement(44213..44215));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS36720;product=tRNA-Val NZ_CAJZAV010000305.1 tRNAscan-SE exon 44173 44248 . - . ID=exon-LDO49_RS36720-1;Parent=rna-LDO49_RS36720;anticodon=(pos:complement(44213..44215));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO49_RS36720;product=tRNA-Val NZ_CAJZAV010000305.1 RefSeq gene 44453 46876 . - . ID=gene-LDO49_RS36725;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=LDO49_RS36725;old_locus_tag=BCEP4_930038 NZ_CAJZAV010000305.1 Protein Homology CDS 44453 46876 . - 0 ID=cds-WP_011352361.1;Parent=gene-LDO49_RS36725;Dbxref=GenBank:WP_011352361.1;Name=WP_011352361.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007585905.1;locus_tag=LDO49_RS36725;product=endopeptidase La;protein_id=WP_011352361.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 47074 48345 . - . ID=gene-LDO49_RS36730;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=LDO49_RS36730;old_locus_tag=BCEP4_930039 NZ_CAJZAV010000305.1 Protein Homology CDS 47074 48345 . - 0 ID=cds-WP_006489345.1;Parent=gene-LDO49_RS36730;Dbxref=GenBank:WP_006489345.1;Name=WP_006489345.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521258.1;locus_tag=LDO49_RS36730;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_006489345.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 48510 49163 . - . ID=gene-LDO49_RS36735;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=LDO49_RS36735;old_locus_tag=BCEP4_930040 NZ_CAJZAV010000305.1 Protein Homology CDS 48510 49163 . - 0 ID=cds-WP_010092137.1;Parent=gene-LDO49_RS36735;Dbxref=GenBank:WP_010092137.1;Name=WP_010092137.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026149.1;locus_tag=LDO49_RS36735;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_010092137.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 49304 50650 . - . ID=gene-LDO49_RS36740;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=LDO49_RS36740;old_locus_tag=BCEP4_930041 NZ_CAJZAV010000305.1 Protein Homology CDS 49304 50650 . - 0 ID=cds-WP_042978235.1;Parent=gene-LDO49_RS36740;Dbxref=GenBank:WP_042978235.1;Name=WP_042978235.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004539679.1;locus_tag=LDO49_RS36740;product=trigger factor;protein_id=WP_042978235.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 51038 51569 . + . ID=gene-LDO49_RS36745;Name=LDO49_RS36745;end_range=51569,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36745;old_locus_tag=BCEP4_930042;partial=true NZ_CAJZAV010000305.1 Protein Homology CDS 51038 51569 . + 0 ID=cds-WP_443798030.1;Parent=gene-LDO49_RS36745;Dbxref=GenBank:WP_443798030.1;Name=WP_443798030.1;Ontology_term=GO:0031388,GO:0008887;end_range=51569,.;gbkey=CDS;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364080.1;locus_tag=LDO49_RS36745;partial=true;product=glycerate kinase;protein_id=WP_443798030.1;transl_table=11 NZ_CAJZAV010000305.1 RefSeq gene 51580 51766 . + . ID=gene-LDO49_RS38455;Name=LDO49_RS38455;end_range=51766,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS38455;partial=true;start_range=.,51580 NZ_CAJZAV010000305.1 Protein Homology CDS 51580 51766 . + 0 ID=cds-WP_443798031.1;Parent=gene-LDO49_RS38455;Dbxref=GenBank:WP_443798031.1;Name=WP_443798031.1;Ontology_term=GO:0031388,GO:0008887;end_range=51766,.;gbkey=CDS;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364080.1;locus_tag=LDO49_RS38455;partial=true;product=glycerate kinase;protein_id=WP_443798031.1;start_range=.,51580;transl_table=11 ##sequence-region NZ_CAJZAV010000306.1 1 26678 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000306.1 RefSeq region 1 26678 . + . ID=NZ_CAJZAV010000306.1:1..26678;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_94 NZ_CAJZAV010000306.1 RefSeq gene 299 1570 . - . ID=gene-LDO49_RS36750;Name=LDO49_RS36750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36750;old_locus_tag=BCEP4_940001 NZ_CAJZAV010000306.1 Protein Homology CDS 299 1570 . - 0 ID=cds-WP_224052903.1;Parent=gene-LDO49_RS36750;Dbxref=GenBank:WP_224052903.1;Name=WP_224052903.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546648.1;locus_tag=LDO49_RS36750;product=SGNH/GDSL hydrolase family protein;protein_id=WP_224052903.1;transl_table=11 NZ_CAJZAV010000306.1 RefSeq gene 1756 2754 . + . ID=gene-LDO49_RS36755;Name=paaA;gbkey=Gene;gene=paaA;gene_biotype=protein_coding;locus_tag=LDO49_RS36755;old_locus_tag=BCEP4_940002 NZ_CAJZAV010000306.1 Protein Homology CDS 1756 2754 . + 0 ID=cds-WP_027788584.1;Parent=gene-LDO49_RS36755;Dbxref=GenBank:WP_027788584.1;Name=WP_027788584.1;Ontology_term=GO:0010124,GO:0097266;gbkey=CDS;gene=paaA;go_function=phenylacetyl-CoA 1%2C2-epoxidase activity|0097266||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023750.1;locus_tag=LDO49_RS36755;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaA;protein_id=WP_027788584.1;transl_table=11 NZ_CAJZAV010000306.1 RefSeq gene 2792 3076 . + . ID=gene-LDO49_RS36760;Name=paaB;gbkey=Gene;gene=paaB;gene_biotype=protein_coding;locus_tag=LDO49_RS36760;old_locus_tag=BCEP4_940003 NZ_CAJZAV010000306.1 Protein Homology CDS 2792 3076 . + 0 ID=cds-WP_059490185.1;Parent=gene-LDO49_RS36760;Dbxref=GenBank:WP_059490185.1;Name=WP_059490185.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaB;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895631.1;locus_tag=LDO49_RS36760;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaB;protein_id=WP_059490185.1;transl_table=11 NZ_CAJZAV010000306.1 RefSeq gene 3087 3890 . + . ID=gene-LDO49_RS36765;Name=paaC;gbkey=Gene;gene=paaC;gene_biotype=protein_coding;locus_tag=LDO49_RS36765;old_locus_tag=BCEP4_940004 NZ_CAJZAV010000306.1 Protein Homology CDS 3087 3890 . + 0 ID=cds-WP_021158570.1;Parent=gene-LDO49_RS36765;Dbxref=GenBank:WP_021158570.1;Name=WP_021158570.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaC;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009971143.1;locus_tag=LDO49_RS36765;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaC;protein_id=WP_021158570.1;transl_table=11 NZ_CAJZAV010000306.1 RefSeq gene 3914 4474 . + . ID=gene-LDO49_RS36770;Name=paaD;gbkey=Gene;gene=paaD;gene_biotype=protein_coding;locus_tag=LDO49_RS36770;old_locus_tag=BCEP4_940005 NZ_CAJZAV010000306.1 Protein Homology CDS 3914 4474 . + 0 ID=cds-WP_048025350.1;Parent=gene-LDO49_RS36770;Dbxref=GenBank:WP_048025350.1;Name=WP_048025350.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaD;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655751.1;locus_tag=LDO49_RS36770;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaD;protein_id=WP_048025350.1;transl_table=11 NZ_CAJZAV010000306.1 RefSeq gene 4480 5568 . + . ID=gene-LDO49_RS36775;Name=paaE;gbkey=Gene;gene=paaE;gene_biotype=protein_coding;locus_tag=LDO49_RS36775;old_locus_tag=BCEP4_940006 NZ_CAJZAV010000306.1 Protein Homology CDS 4480 5568 . + 0 ID=cds-WP_059620901.1;Parent=gene-LDO49_RS36775;Dbxref=GenBank:WP_059620901.1;Name=WP_059620901.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaE;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255661.1;locus_tag=LDO49_RS36775;product=1%2C2-phenylacetyl-CoA epoxidase subunit PaaE;protein_id=WP_059620901.1;transl_table=11 NZ_CAJZAV010000306.1 RefSeq gene 5697 6521 . + . ID=gene-LDO49_RS36780;Name=LDO49_RS36780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36780;old_locus_tag=BCEP4_940007 NZ_CAJZAV010000306.1 Protein Homology CDS 5697 6521 . + 0 ID=cds-WP_224052899.1;Parent=gene-LDO49_RS36780;Dbxref=GenBank:WP_224052899.1;Name=WP_224052899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350659.1;locus_tag=LDO49_RS36780;product=DUF1835 domain-containing protein;protein_id=WP_224052899.1;transl_table=11 NZ_CAJZAV010000306.1 RefSeq gene 6538 7143 . + . ID=gene-LDO49_RS36785;Name=LDO49_RS36785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36785;old_locus_tag=BCEP4_940008 NZ_CAJZAV010000306.1 Protein Homology CDS 6538 7143 . + 0 ID=cds-WP_011350658.1;Parent=gene-LDO49_RS36785;Dbxref=GenBank:WP_011350658.1;Name=WP_011350658.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762847.1;locus_tag=LDO49_RS36785;product=TetR/AcrR family transcriptional regulator;protein_id=WP_011350658.1;transl_table=11 NZ_CAJZAV010000306.1 RefSeq gene 7388 8035 . + . ID=gene-LDO49_RS36790;Name=LDO49_RS36790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36790;old_locus_tag=BCEP4_940010 NZ_CAJZAV010000306.1 Protein Homology CDS 7388 8035 . + 0 ID=cds-WP_021158574.1;Parent=gene-LDO49_RS36790;Dbxref=GenBank:WP_021158574.1;Name=WP_021158574.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092963.1;locus_tag=LDO49_RS36790;product=GNAT family N-acetyltransferase;protein_id=WP_021158574.1;transl_table=11 NZ_CAJZAV010000306.1 RefSeq gene 8093 8617 . - . ID=gene-LDO49_RS36795;Name=LDO49_RS36795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36795;old_locus_tag=BCEP4_940011 NZ_CAJZAV010000306.1 Protein Homology CDS 8093 8617 . - 0 ID=cds-WP_021158575.1;Parent=gene-LDO49_RS36795;Dbxref=GenBank:WP_021158575.1;Name=WP_021158575.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757887.1;locus_tag=LDO49_RS36795;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_021158575.1;transl_table=11 NZ_CAJZAV010000306.1 RefSeq gene 8830 9927 . + . ID=gene-LDO49_RS36800;Name=hppD;gbkey=Gene;gene=hppD;gene_biotype=protein_coding;locus_tag=LDO49_RS36800;old_locus_tag=BCEP4_940012 NZ_CAJZAV010000306.1 Protein Homology CDS 8830 9927 . + 0 ID=cds-WP_021158576.1;Parent=gene-LDO49_RS36800;Dbxref=GenBank:WP_021158576.1;Name=WP_021158576.1;Ontology_term=GO:0006559,GO:0006572,GO:0003868;gbkey=CDS;gene=hppD;go_function=4-hydroxyphenylpyruvate dioxygenase activity|0003868||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,L-tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497422.1;locus_tag=LDO49_RS36800;product=4-hydroxyphenylpyruvate dioxygenase;protein_id=WP_021158576.1;transl_table=11 NZ_CAJZAV010000306.1 RefSeq gene 10060 10254 . - . ID=gene-LDO49_RS36805;Name=LDO49_RS36805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36805;old_locus_tag=BCEP4_940013 NZ_CAJZAV010000306.1 Protein Homology CDS 10060 10254 . - 0 ID=cds-WP_048025345.1;Parent=gene-LDO49_RS36805;Dbxref=GenBank:WP_048025345.1;Name=WP_048025345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482893.1;locus_tag=LDO49_RS36805;product=hypothetical protein;protein_id=WP_048025345.1;transl_table=11 NZ_CAJZAV010000306.1 RefSeq gene 10583 14173 . + . ID=gene-LDO49_RS36810;Name=LDO49_RS36810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36810;old_locus_tag=BCEP4_940014 NZ_CAJZAV010000306.1 Protein Homology CDS 10583 14173 . + 0 ID=cds-WP_224052900.1;Parent=gene-LDO49_RS36810;Dbxref=GenBank:WP_224052900.1;Name=WP_224052900.1;Ontology_term=GO:0030976,GO:0043805,GO:0046872,GO:0051539;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA,indolepyruvate ferredoxin oxidoreductase activity|0043805||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895623.1;locus_tag=LDO49_RS36810;product=indolepyruvate ferredoxin oxidoreductase family protein;protein_id=WP_224052900.1;transl_table=11 NZ_CAJZAV010000306.1 RefSeq gene 14317 16587 . - . ID=gene-LDO49_RS36815;Name=LDO49_RS36815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36815;old_locus_tag=BCEP4_940015 NZ_CAJZAV010000306.1 Protein Homology CDS 14317 16587 . - 0 ID=cds-WP_060074596.1;Parent=gene-LDO49_RS36815;Dbxref=GenBank:WP_060074596.1;Name=WP_060074596.1;Ontology_term=GO:0004470,GO:0004471,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023762.1;locus_tag=LDO49_RS36815;product=NADP-dependent malic enzyme;protein_id=WP_060074596.1;transl_table=11 NZ_CAJZAV010000306.1 RefSeq gene 17046 17732 . + . ID=gene-LDO49_RS36820;Name=LDO49_RS36820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36820;old_locus_tag=BCEP4_940016 NZ_CAJZAV010000306.1 Protein Homology CDS 17046 17732 . + 0 ID=cds-WP_011546659.1;Parent=gene-LDO49_RS36820;Dbxref=GenBank:WP_011546659.1;Name=WP_011546659.1;Ontology_term=GO:0009116,GO:0004588;gbkey=CDS;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401311.1;locus_tag=LDO49_RS36820;product=orotate phosphoribosyltransferase;protein_id=WP_011546659.1;transl_table=11 NZ_CAJZAV010000306.1 RefSeq gene 17973 18593 . + . ID=gene-LDO49_RS36825;Name=LDO49_RS36825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36825;old_locus_tag=BCEP4_940017 NZ_CAJZAV010000306.1 Protein Homology CDS 17973 18593 . + 0 ID=cds-WP_060074595.1;Parent=gene-LDO49_RS36825;Dbxref=GenBank:WP_060074595.1;Name=WP_060074595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477402.1;locus_tag=LDO49_RS36825;product=YbhB/YbcL family Raf kinase inhibitor-like protein;protein_id=WP_060074595.1;transl_table=11 NZ_CAJZAV010000306.1 RefSeq gene 18850 19422 . + . ID=gene-LDO49_RS36830;Name=LDO49_RS36830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36830;old_locus_tag=BCEP4_940018 NZ_CAJZAV010000306.1 Protein Homology CDS 18850 19422 . + 0 ID=cds-WP_021158582.1;Parent=gene-LDO49_RS36830;Dbxref=GenBank:WP_021158582.1;Name=WP_021158582.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350649.1;locus_tag=LDO49_RS36830;product=flavodoxin family protein;protein_id=WP_021158582.1;transl_table=11 NZ_CAJZAV010000306.1 RefSeq gene 19576 20550 . + . ID=gene-LDO49_RS36835;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=LDO49_RS36835;old_locus_tag=BCEP4_940019 NZ_CAJZAV010000306.1 Protein Homology CDS 19576 20550 . + 0 ID=cds-WP_224052901.1;Parent=gene-LDO49_RS36835;Dbxref=GenBank:WP_224052901.1;Name=WP_224052901.1;Ontology_term=GO:0006526,GO:0003942,GO:0005737;gbkey=CDS;gene=argC;go_component=cytoplasm|0005737||IEA;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497427.1;locus_tag=LDO49_RS36835;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_224052901.1;transl_table=11 NZ_CAJZAV010000306.1 RefSeq gene 20988 22415 . + . ID=gene-LDO49_RS36840;Name=LDO49_RS36840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36840;old_locus_tag=BCEP4_940021 NZ_CAJZAV010000306.1 Protein Homology CDS 20988 22415 . + 0 ID=cds-WP_060074594.1;Parent=gene-LDO49_RS36840;Dbxref=GenBank:WP_060074594.1;Name=WP_060074594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655738.1;locus_tag=LDO49_RS36840;product=DUF2957 domain-containing protein;protein_id=WP_060074594.1;transl_table=11 NZ_CAJZAV010000306.1 RefSeq gene 22555 23805 . + . ID=gene-LDO49_RS36845;Name=LDO49_RS36845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36845;old_locus_tag=BCEP4_940022 NZ_CAJZAV010000306.1 Protein Homology CDS 22555 23805 . + 0 ID=cds-WP_021158587.1;Parent=gene-LDO49_RS36845;Dbxref=GenBank:WP_021158587.1;Name=WP_021158587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762855.1;locus_tag=LDO49_RS36845;product=DUF2957 domain-containing protein;protein_id=WP_021158587.1;transl_table=11 NZ_CAJZAV010000306.1 RefSeq gene 23824 24657 . + . ID=gene-LDO49_RS36850;Name=LDO49_RS36850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36850;old_locus_tag=BCEP4_940024 NZ_CAJZAV010000306.1 Protein Homology CDS 23824 24657 . + 0 ID=cds-WP_042974143.1;Parent=gene-LDO49_RS36850;Dbxref=GenBank:WP_042974143.1;Name=WP_042974143.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752472.1;locus_tag=LDO49_RS36850;product=OmpW/AlkL family protein;protein_id=WP_042974143.1;transl_table=11 NZ_CAJZAV010000306.1 RefSeq gene 24842 25771 . - . ID=gene-LDO49_RS36855;Name=LDO49_RS36855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36855;old_locus_tag=BCEP4_940025 NZ_CAJZAV010000306.1 Protein Homology CDS 24842 25771 . - 0 ID=cds-WP_060074593.1;Parent=gene-LDO49_RS36855;Dbxref=GenBank:WP_060074593.1;Name=WP_060074593.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350644.1;locus_tag=LDO49_RS36855;product=LysR family transcriptional regulator;protein_id=WP_060074593.1;transl_table=11 NZ_CAJZAV010000306.1 RefSeq gene 25869 26678 . + . ID=gene-LDO49_RS36860;Name=LDO49_RS36860;end_range=26678,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36860;partial=true NZ_CAJZAV010000306.1 Protein Homology CDS 25869 26678 . + 0 ID=cds-WP_224052902.1;Parent=gene-LDO49_RS36860;Dbxref=GenBank:WP_224052902.1;Name=WP_224052902.1;Ontology_term=GO:0055085,GO:0022857;end_range=26678,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546667.1;locus_tag=LDO49_RS36860;partial=true;product=MFS transporter;protein_id=WP_224052902.1;transl_table=11 ##sequence-region NZ_CAJZAV010000307.1 1 12217 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000307.1 RefSeq region 1 12217 . + . ID=NZ_CAJZAV010000307.1:1..12217;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_95 NZ_CAJZAV010000307.1 RefSeq pseudogene 1 205 . - . ID=gene-LDO49_RS36865;Name=flhF;gbkey=Gene;gene=flhF;gene_biotype=pseudogene;locus_tag=LDO49_RS36865;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAV010000307.1 Protein Homology CDS 1 205 . - 0 ID=cds-LDO49_RS36865;Parent=gene-LDO49_RS36865;Note=positive regulator of class III flagellar genes%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=flhF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546704.1;locus_tag=LDO49_RS36865;partial=true;product=flagellar biosynthesis protein FlhF;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAV010000307.1 RefSeq gene 202 2301 . - . ID=gene-LDO49_RS36870;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=LDO49_RS36870;old_locus_tag=BCEP4_950002 NZ_CAJZAV010000307.1 Protein Homology CDS 202 2301 . - 0 ID=cds-WP_021162676.1;Parent=gene-LDO49_RS36870;Dbxref=GenBank:WP_021162676.1;Name=WP_021162676.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602362.1;locus_tag=LDO49_RS36870;product=flagellar biosynthesis protein FlhA;protein_id=WP_021162676.1;transl_table=11 NZ_CAJZAV010000307.1 RefSeq gene 2298 3494 . - . ID=gene-LDO49_RS36875;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=LDO49_RS36875;old_locus_tag=BCEP4_950003 NZ_CAJZAV010000307.1 Protein Homology CDS 2298 3494 . - 0 ID=cds-WP_021162677.1;Parent=gene-LDO49_RS36875;Dbxref=GenBank:WP_021162677.1;Name=WP_021162677.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023813.1;locus_tag=LDO49_RS36875;product=flagellar biosynthesis protein FlhB;protein_id=WP_021162677.1;transl_table=11 NZ_CAJZAV010000307.1 RefSeq gene 3868 4248 . - . ID=gene-LDO49_RS36880;Name=LDO49_RS36880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36880;old_locus_tag=BCEP4_950004 NZ_CAJZAV010000307.1 Protein Homology CDS 3868 4248 . - 0 ID=cds-WP_021162679.1;Parent=gene-LDO49_RS36880;Dbxref=GenBank:WP_021162679.1;Name=WP_021162679.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350606.1;locus_tag=LDO49_RS36880;product=DUF805 domain-containing protein;protein_id=WP_021162679.1;transl_table=11 NZ_CAJZAV010000307.1 RefSeq gene 4624 5028 . + . ID=gene-LDO49_RS36885;Name=LDO49_RS36885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36885 NZ_CAJZAV010000307.1 GeneMarkS-2+ CDS 4624 5028 . + 0 ID=cds-WP_124475345.1;Parent=gene-LDO49_RS36885;Dbxref=GenBank:WP_124475345.1;Name=WP_124475345.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS36885;product=hypothetical protein;protein_id=WP_124475345.1;transl_table=11 NZ_CAJZAV010000307.1 RefSeq gene 5124 5621 . - . ID=gene-LDO49_RS36890;Name=LDO49_RS36890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36890;old_locus_tag=BCEP4_950007 NZ_CAJZAV010000307.1 Protein Homology CDS 5124 5621 . - 0 ID=cds-WP_021162681.1;Parent=gene-LDO49_RS36890;Dbxref=GenBank:WP_021162681.1;Name=WP_021162681.1;Ontology_term=GO:0003824,GO:0046872;gbkey=CDS;go_function=catalytic activity|0003824||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198641.1;locus_tag=LDO49_RS36890;product=VOC family protein;protein_id=WP_021162681.1;transl_table=11 NZ_CAJZAV010000307.1 RefSeq gene 5792 7033 . - . ID=gene-LDO49_RS36895;Name=LDO49_RS36895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36895;old_locus_tag=BCEP4_950008 NZ_CAJZAV010000307.1 Protein Homology CDS 5792 7033 . - 0 ID=cds-WP_059490240.1;Parent=gene-LDO49_RS36895;Dbxref=GenBank:WP_059490240.1;Name=WP_059490240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212518.1;locus_tag=LDO49_RS36895;product=DUF3443 family protein;protein_id=WP_059490240.1;transl_table=11 NZ_CAJZAV010000307.1 RefSeq gene 7050 7553 . - . ID=gene-LDO49_RS36900;Name=LDO49_RS36900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36900;old_locus_tag=BCEP4_950009 NZ_CAJZAV010000307.1 Protein Homology CDS 7050 7553 . - 0 ID=cds-WP_059678248.1;Parent=gene-LDO49_RS36900;Dbxref=GenBank:WP_059678248.1;Name=WP_059678248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546708.1;locus_tag=LDO49_RS36900;product=DUF2844 domain-containing protein;protein_id=WP_059678248.1;transl_table=11 NZ_CAJZAV010000307.1 RefSeq gene 7822 8553 . - . ID=gene-LDO49_RS36905;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=LDO49_RS36905;old_locus_tag=BCEP4_950010 NZ_CAJZAV010000307.1 Protein Homology CDS 7822 8553 . - 0 ID=cds-WP_021162684.1;Parent=gene-LDO49_RS36905;Dbxref=GenBank:WP_021162684.1;Name=WP_021162684.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350602.1;locus_tag=LDO49_RS36905;product=protein phosphatase CheZ;protein_id=WP_021162684.1;transl_table=11 NZ_CAJZAV010000307.1 RefSeq gene 8555 8950 . - . ID=gene-LDO49_RS36910;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=LDO49_RS36910;old_locus_tag=BCEP4_950011 NZ_CAJZAV010000307.1 Protein Homology CDS 8555 8950 . - 0 ID=cds-WP_006485893.1;Parent=gene-LDO49_RS36910;Dbxref=GenBank:WP_006485893.1;Name=WP_006485893.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754880.1;locus_tag=LDO49_RS36910;product=chemotaxis response regulator CheY;protein_id=WP_006485893.1;transl_table=11 NZ_CAJZAV010000307.1 RefSeq gene 9018 10109 . - . ID=gene-LDO49_RS36915;Name=LDO49_RS36915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36915;old_locus_tag=BCEP4_950012 NZ_CAJZAV010000307.1 Protein Homology CDS 9018 10109 . - 0 ID=cds-WP_042977249.1;Parent=gene-LDO49_RS36915;Dbxref=GenBank:WP_042977249.1;Name=WP_042977249.1;Ontology_term=GO:0006482,GO:0006935,GO:0018277,GO:0000156,GO:0008984,GO:0050568,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphorelay response regulator activity|0000156||IEA,protein-glutamate methylesterase activity|0008984||IEA,protein-glutamine glutaminase activity|0050568||IEA;go_process=protein demethylation|0006482||IEA,chemotaxis|0006935||IEA,protein deamination|0018277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895566.1;locus_tag=LDO49_RS36915;product=protein-glutamate methylesterase/protein-glutamine glutaminase;protein_id=WP_042977249.1;transl_table=11 NZ_CAJZAV010000307.1 RefSeq gene 10106 10885 . - . ID=gene-LDO49_RS36920;Name=cheD;gbkey=Gene;gene=cheD;gene_biotype=protein_coding;locus_tag=LDO49_RS36920;old_locus_tag=BCEP4_950013 NZ_CAJZAV010000307.1 Protein Homology CDS 10106 10885 . - 0 ID=cds-WP_059587977.1;Parent=gene-LDO49_RS36920;Dbxref=GenBank:WP_059587977.1;Name=WP_059587977.1;gbkey=CDS;gene=cheD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694091.1;locus_tag=LDO49_RS36920;product=chemoreceptor glutamine deamidase CheD;protein_id=WP_059587977.1;transl_table=11 NZ_CAJZAV010000307.1 RefSeq gene 10882 11865 . - . ID=gene-LDO49_RS36925;Name=LDO49_RS36925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36925;old_locus_tag=BCEP4_950014 NZ_CAJZAV010000307.1 Protein Homology CDS 10882 11865 . - 0 ID=cds-WP_060073616.1;Parent=gene-LDO49_RS36925;Dbxref=GenBank:WP_060073616.1;Name=WP_060073616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401392.1;locus_tag=LDO49_RS36925;product=CheR family methyltransferase;protein_id=WP_060073616.1;transl_table=11 NZ_CAJZAV010000307.1 RefSeq gene 11869 12144 . - . ID=gene-LDO49_RS36930;Name=LDO49_RS36930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36930;old_locus_tag=BCEP4_950015 NZ_CAJZAV010000307.1 GeneMarkS-2+ CDS 11869 12144 . - 0 ID=cds-WP_290369909.1;Parent=gene-LDO49_RS36930;Dbxref=GenBank:WP_290369909.1;Name=WP_290369909.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS36930;product=hypothetical protein;protein_id=WP_290369909.1;transl_table=11 ##sequence-region NZ_CAJZAV010000308.1 1 4732 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000308.1 RefSeq region 1 4732 . + . ID=NZ_CAJZAV010000308.1:1..4732;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_96 NZ_CAJZAV010000308.1 RefSeq gene 1 731 . - . ID=gene-LDO49_RS36935;Name=LDO49_RS36935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36935;partial=true;start_range=.,1 NZ_CAJZAV010000308.1 Protein Homology CDS 1 731 . - 0 ID=cds-WP_224052904.1;Parent=gene-LDO49_RS36935;Dbxref=GenBank:WP_224052904.1;Name=WP_224052904.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020202195.1;locus_tag=LDO49_RS36935;partial=true;product=type VI secretion system Vgr family protein;protein_id=WP_224052904.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000308.1 RefSeq gene 889 2076 . - . ID=gene-LDO49_RS36940;Name=LDO49_RS36940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36940;old_locus_tag=BCEP4_960002 NZ_CAJZAV010000308.1 Protein Homology CDS 889 2076 . - 0 ID=cds-WP_224052905.1;Parent=gene-LDO49_RS36940;Dbxref=GenBank:WP_224052905.1;Name=WP_224052905.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023304.6;locus_tag=LDO49_RS36940;product=type VI immunity family protein;protein_id=WP_224052905.1;transl_table=11 NZ_CAJZAV010000308.1 RefSeq gene 2073 3419 . - . ID=gene-LDO49_RS36945;Name=LDO49_RS36945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36945;old_locus_tag=BCEP4_960003 NZ_CAJZAV010000308.1 GeneMarkS-2+ CDS 2073 3419 . - 0 ID=cds-WP_224052906.1;Parent=gene-LDO49_RS36945;Dbxref=GenBank:WP_224052906.1;Name=WP_224052906.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS36945;product=hypothetical protein;protein_id=WP_224052906.1;transl_table=11 NZ_CAJZAV010000308.1 RefSeq gene 3423 4732 . - . ID=gene-LDO49_RS36950;Name=LDO49_RS36950;end_range=4732,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36950;old_locus_tag=BCEP4_960004;partial=true NZ_CAJZAV010000308.1 Protein Homology CDS 3423 4732 . - 2 ID=cds-WP_224052907.1;Parent=gene-LDO49_RS36950;Dbxref=GenBank:WP_224052907.1;Name=WP_224052907.1;Ontology_term=GO:0033103,GO:0033104;end_range=4732,.;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008167165.1;locus_tag=LDO49_RS36950;partial=true;product=type VI secretion system Vgr family protein;protein_id=WP_224052907.1;transl_table=11 ##sequence-region NZ_CAJZAV010000309.1 1 2856 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000309.1 RefSeq region 1 2856 . + . ID=NZ_CAJZAV010000309.1:1..2856;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_97 NZ_CAJZAV010000309.1 RefSeq gene 1 2003 . - . ID=gene-LDO49_RS36955;Name=LDO49_RS36955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36955;partial=true;start_range=.,1 NZ_CAJZAV010000309.1 Protein Homology CDS 1 2003 . - 0 ID=cds-WP_224052908.1;Parent=gene-LDO49_RS36955;Dbxref=GenBank:WP_224052908.1;Name=WP_224052908.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019844.6;locus_tag=LDO49_RS36955;partial=true;product=SH3 domain-containing protein;protein_id=WP_224052908.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000309.1 RefSeq gene 2018 2856 . - . ID=gene-LDO49_RS36960;Name=LDO49_RS36960;end_range=2856,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36960;old_locus_tag=BCEP4_970002;partial=true NZ_CAJZAV010000309.1 Protein Homology CDS 2018 2856 . - 2 ID=cds-WP_224052909.1;Parent=gene-LDO49_RS36960;Dbxref=GenBank:WP_224052909.1;Name=WP_224052909.1;Ontology_term=GO:0033103,GO:0033104;end_range=2856,.;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020202195.1;locus_tag=LDO49_RS36960;partial=true;product=type VI secretion system Vgr family protein;protein_id=WP_224052909.1;transl_table=11 ##sequence-region NZ_CAJZAV010000310.1 1 24925 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000310.1 RefSeq region 1 24925 . + . ID=NZ_CAJZAV010000310.1:1..24925;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_98 NZ_CAJZAV010000310.1 RefSeq gene 1 437 . - . ID=gene-LDO49_RS36965;Name=LDO49_RS36965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36965;partial=true;start_range=.,1 NZ_CAJZAV010000310.1 Protein Homology CDS 1 437 . - 0 ID=cds-WP_253074699.1;Parent=gene-LDO49_RS36965;Dbxref=GenBank:WP_253074699.1;Name=WP_253074699.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476033.1;locus_tag=LDO49_RS36965;partial=true;product=SAM-dependent methyltransferase;protein_id=WP_253074699.1;start_range=.,1;transl_table=11 NZ_CAJZAV010000310.1 cmsearch riboswitch 548 785 . - . ID=id-NZ_CAJZAV010000310.1:548..785;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAV010000310.1 RefSeq gene 1131 1385 . - . ID=gene-LDO49_RS36970;Name=LDO49_RS36970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36970;old_locus_tag=BCEP4_980002 NZ_CAJZAV010000310.1 GeneMarkS-2+ CDS 1131 1385 . - 0 ID=cds-WP_059496021.1;Parent=gene-LDO49_RS36970;Dbxref=GenBank:WP_059496021.1;Name=WP_059496021.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS36970;product=hypothetical protein;protein_id=WP_059496021.1;transl_table=11 NZ_CAJZAV010000310.1 cmsearch riboswitch 1666 1930 . + . ID=id-NZ_CAJZAV010000310.1:1666..1930;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAV010000310.1 RefSeq gene 2119 3177 . + . ID=gene-LDO49_RS36975;Name=LDO49_RS36975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36975;old_locus_tag=BCEP4_980003 NZ_CAJZAV010000310.1 Protein Homology CDS 2119 3177 . + 0 ID=cds-WP_042975467.1;Parent=gene-LDO49_RS36975;Dbxref=GenBank:WP_042975467.1;Name=WP_042975467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004266608.1;locus_tag=LDO49_RS36975;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_042975467.1;transl_table=11 NZ_CAJZAV010000310.1 RefSeq gene 3204 4292 . + . ID=gene-LDO49_RS36980;Name=cobW;gbkey=Gene;gene=cobW;gene_biotype=protein_coding;locus_tag=LDO49_RS36980;old_locus_tag=BCEP4_980004 NZ_CAJZAV010000310.1 Protein Homology CDS 3204 4292 . + 0 ID=cds-WP_059484574.1;Parent=gene-LDO49_RS36980;Dbxref=GenBank:WP_059484574.1;Name=WP_059484574.1;Ontology_term=GO:0009236;gbkey=CDS;gene=cobW;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328470.1;locus_tag=LDO49_RS36980;product=cobalamin biosynthesis protein CobW;protein_id=WP_059484574.1;transl_table=11 NZ_CAJZAV010000310.1 RefSeq gene 4299 8111 . + . ID=gene-LDO49_RS36985;Name=cobN;gbkey=Gene;gene=cobN;gene_biotype=protein_coding;locus_tag=LDO49_RS36985;old_locus_tag=BCEP4_980005 NZ_CAJZAV010000310.1 Protein Homology CDS 4299 8111 . + 0 ID=cds-WP_224052910.1;Parent=gene-LDO49_RS36985;Dbxref=GenBank:WP_224052910.1;Name=WP_224052910.1;Ontology_term=GO:0009236,GO:0051116;gbkey=CDS;gene=cobN;go_function=cobaltochelatase activity|0051116||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213350.1;locus_tag=LDO49_RS36985;product=cobaltochelatase subunit CobN;protein_id=WP_224052910.1;transl_table=11 NZ_CAJZAV010000310.1 RefSeq gene 8108 9184 . + . ID=gene-LDO49_RS36990;Name=LDO49_RS36990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36990;old_locus_tag=BCEP4_980007 NZ_CAJZAV010000310.1 Protein Homology CDS 8108 9184 . + 0 ID=cds-WP_224052911.1;Parent=gene-LDO49_RS36990;Dbxref=GenBank:WP_224052911.1;Name=WP_224052911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363873.1;locus_tag=LDO49_RS36990;product=ATP-binding protein;protein_id=WP_224052911.1;transl_table=11 NZ_CAJZAV010000310.1 RefSeq gene 9253 9861 . + . ID=gene-LDO49_RS36995;Name=LDO49_RS36995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS36995;old_locus_tag=BCEP4_980006 NZ_CAJZAV010000310.1 Protein Homology CDS 9253 9861 . + 0 ID=cds-WP_224052912.1;Parent=gene-LDO49_RS36995;Dbxref=GenBank:WP_224052912.1;Name=WP_224052912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496442.1;locus_tag=LDO49_RS36995;product=vWA domain-containing protein;protein_id=WP_224052912.1;transl_table=11 NZ_CAJZAV010000310.1 RefSeq gene 9922 10374 . + . ID=gene-LDO49_RS37000;Name=LDO49_RS37000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37000;old_locus_tag=BCEP4_980008 NZ_CAJZAV010000310.1 Protein Homology CDS 9922 10374 . + 0 ID=cds-WP_021160082.1;Parent=gene-LDO49_RS37000;Dbxref=GenBank:WP_021160082.1;Name=WP_021160082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897046.1;locus_tag=LDO49_RS37000;product=YaiI/YqxD family protein;protein_id=WP_021160082.1;transl_table=11 NZ_CAJZAV010000310.1 RefSeq gene 10557 11129 . + . ID=gene-LDO49_RS37005;Name=LDO49_RS37005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37005;old_locus_tag=BCEP4_980009 NZ_CAJZAV010000310.1 Protein Homology CDS 10557 11129 . + 0 ID=cds-WP_196483158.1;Parent=gene-LDO49_RS37005;Dbxref=GenBank:WP_196483158.1;Name=WP_196483158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756007.1;locus_tag=LDO49_RS37005;product=DUF1993 domain-containing protein;protein_id=WP_196483158.1;transl_table=11 NZ_CAJZAV010000310.1 RefSeq gene 11143 11469 . + . ID=gene-LDO49_RS37010;Name=LDO49_RS37010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37010;old_locus_tag=BCEP4_980010 NZ_CAJZAV010000310.1 Protein Homology CDS 11143 11469 . + 0 ID=cds-WP_059551994.1;Parent=gene-LDO49_RS37010;Dbxref=GenBank:WP_059551994.1;Name=WP_059551994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332295.1;locus_tag=LDO49_RS37010;product=low molecular weight protein tyrosine phosphatase family protein;protein_id=WP_059551994.1;transl_table=11 NZ_CAJZAV010000310.1 RefSeq gene 11491 11913 . - . ID=gene-LDO49_RS37015;Name=LDO49_RS37015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37015;old_locus_tag=BCEP4_980011 NZ_CAJZAV010000310.1 Protein Homology CDS 11491 11913 . - 0 ID=cds-WP_224052913.1;Parent=gene-LDO49_RS37015;Dbxref=GenBank:WP_224052913.1;Name=WP_224052913.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545399.1;locus_tag=LDO49_RS37015;product=NUDIX hydrolase;protein_id=WP_224052913.1;transl_table=11 NZ_CAJZAV010000310.1 RefSeq gene 12064 12303 . - . ID=gene-LDO49_RS37020;Name=LDO49_RS37020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37020;old_locus_tag=BCEP4_980012 NZ_CAJZAV010000310.1 Protein Homology CDS 12064 12303 . - 0 ID=cds-WP_059710209.1;Parent=gene-LDO49_RS37020;Dbxref=GenBank:WP_059710209.1;Name=WP_059710209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492940.1;locus_tag=LDO49_RS37020;product=hypothetical protein;protein_id=WP_059710209.1;transl_table=11 NZ_CAJZAV010000310.1 RefSeq gene 12581 13777 . + . ID=gene-LDO49_RS37025;Name=LDO49_RS37025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37025;old_locus_tag=BCEP4_980013 NZ_CAJZAV010000310.1 Protein Homology CDS 12581 13777 . + 0 ID=cds-WP_224052914.1;Parent=gene-LDO49_RS37025;Dbxref=GenBank:WP_224052914.1;Name=WP_224052914.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656852.1;locus_tag=LDO49_RS37025;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_224052914.1;transl_table=11 NZ_CAJZAV010000310.1 RefSeq gene 13892 15193 . + . ID=gene-LDO49_RS37030;Name=LDO49_RS37030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37030;old_locus_tag=BCEP4_980014 NZ_CAJZAV010000310.1 Protein Homology CDS 13892 15193 . + 0 ID=cds-WP_224052915.1;Parent=gene-LDO49_RS37030;Dbxref=GenBank:WP_224052915.1;Name=WP_224052915.1;Ontology_term=GO:0046942,GO:1905039,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=carboxylic acid transport|0046942||IEA,carboxylic acid transmembrane transport|1905039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332301.1;locus_tag=LDO49_RS37030;product=CitMHS family transporter;protein_id=WP_224052915.1;transl_table=11 NZ_CAJZAV010000310.1 RefSeq gene 15336 16502 . + . ID=gene-LDO49_RS37035;Name=LDO49_RS37035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37035;old_locus_tag=BCEP4_980015 NZ_CAJZAV010000310.1 Protein Homology CDS 15336 16502 . + 0 ID=cds-WP_021160073.1;Parent=gene-LDO49_RS37035;Dbxref=GenBank:WP_021160073.1;Name=WP_021160073.1;Ontology_term=GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363881.1;locus_tag=LDO49_RS37035;product=acyl-CoA dehydrogenase family protein;protein_id=WP_021160073.1;transl_table=11 NZ_CAJZAV010000310.1 RefSeq gene 16563 17306 . + . ID=gene-LDO49_RS37040;Name=LDO49_RS37040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37040;old_locus_tag=BCEP4_980016 NZ_CAJZAV010000310.1 Protein Homology CDS 16563 17306 . + 0 ID=cds-WP_021160072.1;Parent=gene-LDO49_RS37040;Dbxref=GenBank:WP_021160072.1;Name=WP_021160072.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328481.1;locus_tag=LDO49_RS37040;product=IclR family transcriptional regulator;protein_id=WP_021160072.1;transl_table=11 NZ_CAJZAV010000310.1 RefSeq gene 17433 18788 . - . ID=gene-LDO49_RS37045;Name=LDO49_RS37045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37045;old_locus_tag=BCEP4_980017 NZ_CAJZAV010000310.1 Protein Homology CDS 17433 18788 . - 0 ID=cds-WP_224052916.1;Parent=gene-LDO49_RS37045;Dbxref=GenBank:WP_224052916.1;Name=WP_224052916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496435.1;locus_tag=LDO49_RS37045;product=chitinase;protein_id=WP_224052916.1;transl_table=11 NZ_CAJZAV010000310.1 RefSeq gene 19179 19502 . + . ID=gene-LDO49_RS37050;Name=LDO49_RS37050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37050;old_locus_tag=BCEP4_980019 NZ_CAJZAV010000310.1 Protein Homology CDS 19179 19502 . + 0 ID=cds-WP_048020561.1;Parent=gene-LDO49_RS37050;Dbxref=GenBank:WP_048020561.1;Name=WP_048020561.1;Ontology_term=GO:0007155,GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011401341.1;locus_tag=LDO49_RS37050;product=H-type lectin domain-containing protein;protein_id=WP_048020561.1;transl_table=11 NZ_CAJZAV010000310.1 RefSeq gene 19519 21927 . + . ID=gene-LDO49_RS37055;Name=LDO49_RS37055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37055;old_locus_tag=BCEP4_980020 NZ_CAJZAV010000310.1 Protein Homology CDS 19519 21927 . + 0 ID=cds-WP_224052917.1;Parent=gene-LDO49_RS37055;Dbxref=GenBank:WP_224052917.1;Name=WP_224052917.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017183.6;locus_tag=LDO49_RS37055;product=Ig domain-containing protein;protein_id=WP_224052917.1;transl_table=11 NZ_CAJZAV010000310.1 RefSeq gene 22153 23055 . - . ID=gene-LDO49_RS37060;Name=LDO49_RS37060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37060;old_locus_tag=BCEP4_980021 NZ_CAJZAV010000310.1 Protein Homology CDS 22153 23055 . - 0 ID=cds-WP_224052918.1;Parent=gene-LDO49_RS37060;Dbxref=GenBank:WP_224052918.1;Name=WP_224052918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351973.1;locus_tag=LDO49_RS37060;product=LysR substrate-binding domain-containing protein;protein_id=WP_224052918.1;transl_table=11 NZ_CAJZAV010000310.1 RefSeq gene 23150 24349 . + . ID=gene-LDO49_RS37065;Name=LDO49_RS37065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37065;old_locus_tag=BCEP4_980022 NZ_CAJZAV010000310.1 Protein Homology CDS 23150 24349 . + 0 ID=cds-WP_060069946.1;Parent=gene-LDO49_RS37065;Dbxref=GenBank:WP_060069946.1;Name=WP_060069946.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498074.1;locus_tag=LDO49_RS37065;product=MFS transporter;protein_id=WP_060069946.1;transl_table=11 NZ_CAJZAV010000310.1 RefSeq pseudogene 24356 24740 . - . ID=gene-LDO49_RS37070;Name=LDO49_RS37070;end_range=24740,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37070;old_locus_tag=BCEP4_980023;partial=true;pseudo=true NZ_CAJZAV010000310.1 Protein Homology CDS 24356 24740 . - 1 ID=cds-LDO49_RS37070;Parent=gene-LDO49_RS37070;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=24740,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408520.1;locus_tag=LDO49_RS37070;partial=true;product=cobalamin biosynthesis protein CbiG;pseudo=true;transl_table=11 NZ_CAJZAV010000310.1 RefSeq pseudogene 24751 24925 . - . ID=gene-LDO49_RS37690;Name=LDO49_RS37690;end_range=24925,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO49_RS37690;old_locus_tag=BCEP4_980024;partial=true;pseudo=true;start_range=.,24751 NZ_CAJZAV010000310.1 Protein Homology CDS 24751 24925 . - 1 ID=cds-LDO49_RS37690;Parent=gene-LDO49_RS37690;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=24925,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875862.1;locus_tag=LDO49_RS37690;partial=true;product=cobalamin biosynthesis protein CbiG;pseudo=true;start_range=.,24751;transl_table=11 ##sequence-region NZ_CAJZAV010000311.1 1 24411 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=292 NZ_CAJZAV010000311.1 RefSeq region 1 24411 . + . ID=NZ_CAJZAV010000311.1:1..24411;Dbxref=taxon:292;gbkey=Src;genome=genomic;isolate=BCEP441;isolation-source=Rice root-associated bacteria;mol_type=genomic DNA;note=contig: BCEP4_Contig_99 NZ_CAJZAV010000311.1 RefSeq gene 147 1046 . - . ID=gene-LDO49_RS37075;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=LDO49_RS37075;old_locus_tag=BCEP4_990002 NZ_CAJZAV010000311.1 Protein Homology CDS 147 1046 . - 0 ID=cds-WP_059489186.1;Parent=gene-LDO49_RS37075;Dbxref=GenBank:WP_059489186.1;Name=WP_059489186.1;gbkey=CDS;gene=icmH;inference=COORDINATES: protein motif:HMM:NF038228.1;locus_tag=LDO49_RS37075;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_059489186.1;transl_table=11 NZ_CAJZAV010000311.1 RefSeq gene 1048 2385 . - . ID=gene-LDO49_RS37080;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LDO49_RS37080;old_locus_tag=BCEP4_990003 NZ_CAJZAV010000311.1 Protein Homology CDS 1048 2385 . - 0 ID=cds-WP_059489188.1;Parent=gene-LDO49_RS37080;Dbxref=GenBank:WP_059489188.1;Name=WP_059489188.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:TIGR03353.2;locus_tag=LDO49_RS37080;product=type VI secretion system baseplate subunit TssK;protein_id=WP_059489188.1;transl_table=11 NZ_CAJZAV010000311.1 RefSeq gene 2382 3455 . - . ID=gene-LDO49_RS37085;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LDO49_RS37085;old_locus_tag=BCEP4_990004 NZ_CAJZAV010000311.1 Protein Homology CDS 2382 3455 . - 0 ID=cds-WP_224052919.1;Parent=gene-LDO49_RS37085;Dbxref=GenBank:WP_224052919.1;Name=WP_224052919.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:TIGR03352.1;locus_tag=LDO49_RS37085;product=type VI secretion system lipoprotein TssJ;protein_id=WP_224052919.1;transl_table=11 NZ_CAJZAV010000311.1 RefSeq gene 3452 4795 . - . ID=gene-LDO49_RS37090;Name=tagH;gbkey=Gene;gene=tagH;gene_biotype=protein_coding;locus_tag=LDO49_RS37090;old_locus_tag=BCEP4_990005 NZ_CAJZAV010000311.1 Protein Homology CDS 3452 4795 . - 0 ID=cds-WP_060051280.1;Parent=gene-LDO49_RS37090;Dbxref=GenBank:WP_060051280.1;Name=WP_060051280.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tagH;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:TIGR03354.1;locus_tag=LDO49_RS37090;product=type VI secretion system-associated FHA domain protein TagH;protein_id=WP_060051280.1;transl_table=11 NZ_CAJZAV010000311.1 RefSeq gene 4792 5811 . - . ID=gene-LDO49_RS37095;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LDO49_RS37095;old_locus_tag=BCEP4_990006 NZ_CAJZAV010000311.1 Protein Homology CDS 4792 5811 . - 0 ID=cds-WP_224052920.1;Parent=gene-LDO49_RS37095;Dbxref=GenBank:WP_224052920.1;Name=WP_224052920.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:TIGR03347.1;locus_tag=LDO49_RS37095;product=type VI secretion system baseplate subunit TssG;protein_id=WP_224052920.1;transl_table=11 NZ_CAJZAV010000311.1 RefSeq gene 5775 7541 . - . ID=gene-LDO49_RS37100;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LDO49_RS37100;old_locus_tag=BCEP4_990007 NZ_CAJZAV010000311.1 Protein Homology CDS 5775 7541 . - 0 ID=cds-WP_059620538.1;Parent=gene-LDO49_RS37100;Dbxref=GenBank:WP_059620538.1;Name=WP_059620538.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:TIGR03359.1;locus_tag=LDO49_RS37100;product=type VI secretion system baseplate subunit TssF;protein_id=WP_059620538.1;transl_table=11 NZ_CAJZAV010000311.1 RefSeq gene 7561 7989 . - . ID=gene-LDO49_RS37105;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=LDO49_RS37105;old_locus_tag=BCEP4_990008 NZ_CAJZAV010000311.1 Protein Homology CDS 7561 7989 . - 0 ID=cds-WP_048022872.1;Parent=gene-LDO49_RS37105;Dbxref=GenBank:WP_048022872.1;Name=WP_048022872.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:TIGR03357.1;locus_tag=LDO49_RS37105;product=type VI secretion system baseplate subunit TssE;protein_id=WP_048022872.1;transl_table=11 NZ_CAJZAV010000311.1 RefSeq gene 8005 9486 . - . ID=gene-LDO49_RS37110;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=LDO49_RS37110;old_locus_tag=BCEP4_990009 NZ_CAJZAV010000311.1 Protein Homology CDS 8005 9486 . - 0 ID=cds-WP_224052921.1;Parent=gene-LDO49_RS37110;Dbxref=GenBank:WP_224052921.1;Name=WP_224052921.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018911698.1;locus_tag=LDO49_RS37110;product=type VI secretion system contractile sheath large subunit;protein_id=WP_224052921.1;transl_table=11 NZ_CAJZAV010000311.1 RefSeq gene 9527 10030 . - . ID=gene-LDO49_RS37115;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=LDO49_RS37115;old_locus_tag=BCEP4_990010 NZ_CAJZAV010000311.1 Protein Homology CDS 9527 10030 . - 0 ID=cds-WP_048022876.1;Parent=gene-LDO49_RS37115;Dbxref=GenBank:WP_048022876.1;Name=WP_048022876.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530571.1;locus_tag=LDO49_RS37115;product=type VI secretion system contractile sheath small subunit;protein_id=WP_048022876.1;transl_table=11 NZ_CAJZAV010000311.1 RefSeq gene 10513 13080 . + . ID=gene-LDO49_RS37120;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=LDO49_RS37120;old_locus_tag=BCEP4_990012 NZ_CAJZAV010000311.1 Protein Homology CDS 10513 13080 . + 0 ID=cds-WP_059587281.1;Parent=gene-LDO49_RS37120;Dbxref=GenBank:WP_059587281.1;Name=WP_059587281.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014192981.1;locus_tag=LDO49_RS37120;product=type VI secretion system ATPase TssH;protein_id=WP_059587281.1;transl_table=11 NZ_CAJZAV010000311.1 RefSeq gene 13093 14652 . + . ID=gene-LDO49_RS37125;Name=LDO49_RS37125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37125;old_locus_tag=BCEP4_990013 NZ_CAJZAV010000311.1 Protein Homology CDS 13093 14652 . + 0 ID=cds-WP_224052922.1;Parent=gene-LDO49_RS37125;Dbxref=GenBank:WP_224052922.1;Name=WP_224052922.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF025885.6;locus_tag=LDO49_RS37125;product=sigma 54-interacting transcriptional regulator;protein_id=WP_224052922.1;transl_table=11 NZ_CAJZAV010000311.1 RefSeq gene 14649 15362 . + . ID=gene-LDO49_RS37130;Name=vasI;gbkey=Gene;gene=vasI;gene_biotype=protein_coding;locus_tag=LDO49_RS37130;old_locus_tag=BCEP4_990014 NZ_CAJZAV010000311.1 Protein Homology CDS 14649 15362 . + 0 ID=cds-WP_224052923.1;Parent=gene-LDO49_RS37130;Dbxref=GenBank:WP_224052923.1;Name=WP_224052923.1;gbkey=CDS;gene=vasI;inference=COORDINATES: protein motif:HMM:NF022763.6;locus_tag=LDO49_RS37130;product=type VI secretion system-associated protein VasI;protein_id=WP_224052923.1;transl_table=11 NZ_CAJZAV010000311.1 RefSeq gene 15350 16789 . + . ID=gene-LDO49_RS37135;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=LDO49_RS37135;old_locus_tag=BCEP4_990015 NZ_CAJZAV010000311.1 Protein Homology CDS 15350 16789 . + 0 ID=cds-WP_224052924.1;Parent=gene-LDO49_RS37135;Dbxref=GenBank:WP_224052924.1;Name=WP_224052924.1;gbkey=CDS;gene=tssA;inference=COORDINATES: protein motif:HMM:TIGR03362.1;locus_tag=LDO49_RS37135;product=type VI secretion system protein TssA;protein_id=WP_224052924.1;transl_table=11 NZ_CAJZAV010000311.1 RefSeq gene 16805 20566 . + . ID=gene-LDO49_RS37140;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=LDO49_RS37140;old_locus_tag=BCEP4_990016 NZ_CAJZAV010000311.1 Protein Homology CDS 16805 20566 . + 0 ID=cds-WP_224052925.1;Parent=gene-LDO49_RS37140;Dbxref=GenBank:WP_224052925.1;Name=WP_224052925.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:TIGR03348.1;locus_tag=LDO49_RS37140;product=type VI secretion system membrane subunit TssM;protein_id=WP_224052925.1;transl_table=11 NZ_CAJZAV010000311.1 RefSeq gene 20811 21404 . + . ID=gene-LDO49_RS37145;Name=LDO49_RS37145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37145;old_locus_tag=BCEP4_990017 NZ_CAJZAV010000311.1 GeneMarkS-2+ CDS 20811 21404 . + 0 ID=cds-WP_224052926.1;Parent=gene-LDO49_RS37145;Dbxref=GenBank:WP_224052926.1;Name=WP_224052926.1;Ontology_term=GO:0016667;gbkey=CDS;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37145;product=DsbA family protein;protein_id=WP_224052926.1;transl_table=11 NZ_CAJZAV010000311.1 RefSeq gene 21694 22644 . + . ID=gene-LDO49_RS37150;Name=LDO49_RS37150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37150;old_locus_tag=BCEP4_990018 NZ_CAJZAV010000311.1 Protein Homology CDS 21694 22644 . + 0 ID=cds-WP_372585894.1;Parent=gene-LDO49_RS37150;Dbxref=GenBank:WP_372585894.1;Name=WP_372585894.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558121.1;locus_tag=LDO49_RS37150;product=IS110 family transposase;protein_id=WP_372585894.1;transl_table=11 NZ_CAJZAV010000311.1 RefSeq gene 22752 23453 . - . ID=gene-LDO49_RS37155;Name=LDO49_RS37155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37155;old_locus_tag=BCEP4_990019 NZ_CAJZAV010000311.1 GeneMarkS-2+ CDS 22752 23453 . - 0 ID=cds-WP_081052452.1;Parent=gene-LDO49_RS37155;Dbxref=GenBank:WP_081052452.1;Name=WP_081052452.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO49_RS37155;product=hypothetical protein;protein_id=WP_081052452.1;transl_table=11 NZ_CAJZAV010000311.1 RefSeq gene 23717 24411 . - . ID=gene-LDO49_RS37160;Name=LDO49_RS37160;end_range=24411,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO49_RS37160;old_locus_tag=BCEP4_990020;partial=true NZ_CAJZAV010000311.1 Protein Homology CDS 23717 24411 . - 2 ID=cds-WP_224052927.1;Parent=gene-LDO49_RS37160;Dbxref=GenBank:WP_224052927.1;Name=WP_224052927.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;end_range=24411,.;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: protein motif:HMM:NF013152.6;locus_tag=LDO49_RS37160;partial=true;product=glycoside hydrolase family protein;protein_id=WP_224052927.1;transl_table=11 ###